Your job contains 1 sequence.
>021657
MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS
IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD
ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK
FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA
GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKA
HVISCTSKP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021657
(309 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 1229 4.3e-125 1
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 1201 4.0e-122 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 337 5.7e-36 2
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 356 1.2e-35 2
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 344 8.1e-35 2
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 344 8.1e-35 2
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 344 8.1e-35 2
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 344 8.1e-35 2
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 344 8.1e-35 2
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 344 8.1e-35 2
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 344 8.1e-35 2
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 344 8.1e-35 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 344 2.1e-34 2
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 344 2.1e-34 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 344 2.1e-34 2
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 334 3.4e-34 2
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 343 4.4e-34 2
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 335 7.1e-34 2
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 338 9.0e-34 2
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 340 1.1e-33 2
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 340 1.1e-33 2
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 340 1.1e-33 2
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 340 1.1e-33 2
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 340 1.1e-33 2
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 340 1.1e-33 2
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 340 1.1e-33 2
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 340 1.1e-33 2
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 340 1.1e-33 2
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 340 1.1e-33 2
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 338 1.9e-33 2
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 359 6.7e-33 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 347 1.3e-31 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 345 2.0e-31 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 345 2.0e-31 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 338 1.1e-30 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 337 1.4e-30 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 332 4.9e-30 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 326 2.1e-29 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 293 4.7e-29 2
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 321 7.1e-29 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 304 4.5e-27 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 258 3.3e-26 2
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 287 2.9e-25 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 267 5.6e-23 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 259 4.7e-22 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 255 2.2e-21 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 251 7.9e-21 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 233 5.6e-19 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 232 7.5e-19 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 232 7.5e-19 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 231 9.6e-19 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 229 1.6e-18 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 228 2.2e-18 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 226 3.4e-18 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 220 1.9e-17 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 218 3.0e-17 1
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 208 2.0e-15 1
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 208 2.0e-15 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 206 6.9e-15 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 201 3.3e-14 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 195 7.5e-14 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 194 9.2e-14 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 194 1.0e-13 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 193 1.3e-13 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 197 1.6e-13 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 192 1.9e-13 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 190 3.3e-13 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 189 4.4e-13 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 189 4.8e-13 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 180 6.5e-12 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 177 2.0e-11 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 177 5.6e-11 1
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 177 5.6e-11 1
ASPGD|ASPL0000074357 - symbol:AN4518 species:162425 "Emer... 181 7.0e-11 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 167 2.6e-10 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 167 3.1e-10 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 159 3.2e-10 2
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 165 4.6e-10 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 146 4.6e-10 2
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 153 8.2e-10 2
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 159 8.4e-10 2
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 166 9.7e-10 1
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 166 9.7e-10 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 147 1.0e-09 2
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 164 1.1e-09 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 168 1.3e-09 1
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 152 1.3e-09 2
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 146 1.4e-09 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 146 1.4e-09 2
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 146 1.4e-09 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 150 1.5e-09 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 159 2.2e-09 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 159 2.8e-09 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 159 2.8e-09 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 159 2.8e-09 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 159 2.8e-09 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 159 2.8e-09 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 159 2.8e-09 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 159 3.5e-09 1
UNIPROTKB|A8QB65 - symbol:Bm1_47965 "Ribosome biogenesis ... 160 4.0e-09 1
WARNING: Descriptions of 545 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 233/307 (75%), Positives = 259/307 (84%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
ILTGHQDNAEFALAMCPTEP+VLSGGKDKSVVLWSIQDHIT+ TD +KS SGSII
Sbjct: 214 ILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTD---SKS---SGSII 267
Query: 63 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122
KQ+ G+G DK + P+VGPRG+Y+GHEDTVEDV F P+SAQEFCSVGDDSCLILWDAR
Sbjct: 268 KQT---GEGTDKN-ESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDAR 323
Query: 123 VGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182
GT+PV KVEKAHDADLHCVDWNP DDNLILTGSADN+VR+FDRR LT+NGVGSPI KFE
Sbjct: 324 TGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFE 383
Query: 183 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242
GH AAVLCVQWSPDKSSVFGSSAEDGLLNIWDY++V KK ++ ++ PAGLFFQHAGH
Sbjct: 384 GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKS---PAGLFFQHAGH 440
Query: 243 RDKVVDFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQDEVLAELEKFKAHV 302
RDKVVDFHWNASDPW LQIWRMSDLIYRP++EV+AELEKFK+HV
Sbjct: 441 RDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYRPEEEVVAELEKFKSHV 500
Query: 303 ISCTSKP 309
++C SKP
Sbjct: 501 MTCASKP 507
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
Identities = 228/306 (74%), Positives = 253/306 (82%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
+L GHQD+AEFALAMCPTEP+VLSGGKDKSV+LW+IQDHIT + +D +KS GSS
Sbjct: 194 LLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHITMAGSD---SKSPGSS---F 247
Query: 63 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122
KQ+ G+G+DK GPSVGPRGIYNGH+DTVEDV FCPSSAQEFCSVGDDSCL+LWDAR
Sbjct: 248 KQT---GEGSDKTG-GPSVGPRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDAR 303
Query: 123 VGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182
GTSP +KVEKAHDADLHCVDWNP D+NLILTGSADN+VR+FDRRNLTSNGVGSP+ KFE
Sbjct: 304 TGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFE 363
Query: 183 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242
GH AAVLCVQWSPDKSSVFGSSAEDGLLNIWD ++VGKK E R T P GLFFQHAGH
Sbjct: 364 GHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSE---RATKTPDGLFFQHAGH 420
Query: 243 RDKVVDFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQDEVLAELEKFKAHV 302
RDKVVDFHW+ +PW LQIWRMSDLIYRP+DEVL ELEKFK+HV
Sbjct: 421 RDKVVDFHWSLLNPWTIVSVSDNCESIGGGGTLQIWRMSDLIYRPEDEVLTELEKFKSHV 480
Query: 303 ISCTSK 308
+CTSK
Sbjct: 481 FTCTSK 486
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 337 (123.7 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 69/211 (32%), Positives = 112/211 (53%)
Query: 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 140
+ P +Y GH+ +EDV + + F S GDD L++WD R T+ + K H+ +++
Sbjct: 208 LNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR--TNQMQHQVKVHEREIN 265
Query: 141 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200
+ +NP ++ ++ T S+D++V +FD R LT+ P++ H V V+W P+ +V
Sbjct: 266 YLSFNPFNEWVLATASSDSTVALFDLRKLTA-----PLHVLSKHEGEVFQVEWDPNHETV 320
Query: 201 FGSSAEDGLLNIWDYEKVG-KKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXX 259
SS ED L +WD +VG +++E + P L F H GH+ K+ DF WN +PW
Sbjct: 321 LASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVI 380
Query: 260 XXXXXXXXXXXXXXXLQIWRMSDLIYRPQDE 290
LQ+W+M++ IYR DE
Sbjct: 381 SSVAEDNS-------LQVWQMAESIYREDDE 404
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/99 (26%), Positives = 53/99 (53%)
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H+ + + + W+ + +L+GS D + ++D ++ V +P++ +EGH + + V W
Sbjct: 168 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWH 227
Query: 195 PDKSSVFGSSAEDGLLNIWDYE--KVGKKVEQGPRTTNY 231
++FGS+ +D L IWD ++ +V+ R NY
Sbjct: 228 MKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINY 266
Score = 67 (28.6 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 4 LTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDP 49
L GH+ + LA E Y+LSG +D+ + LW + T +P
Sbjct: 165 LMGHEQEG-YGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNP 210
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 356 (130.4 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 79/227 (34%), Positives = 118/227 (51%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAH 135
+G V + I+ GH VEDV++ F SV DD L++WD R TS AH
Sbjct: 213 EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAH 272
Query: 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP 195
A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSP 327
Query: 196 DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNAS 254
++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN +
Sbjct: 328 HNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
Query: 255 DPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD-EVLAELEKFKA 300
+PW +Q+W+M++ IY +D E A+ EK+ +
Sbjct: 386 EPWVICSVSEDNI-------MQVWQMAENIYNDEDPEGAADTEKYNS 425
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 32/141 (22%), Positives = 65/141 (46%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP----VIKVEK---AHDADLHC 141
GH+ +++ P+ + S DD + LWD + T P ++ + H A +
Sbjct: 175 GHQKEGYGLSWNPNLSGCLLSASDDHTICLWD--ISTVPKEGKIVDAKTIFTGHTAVVED 232
Query: 142 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 201
V W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHAVDAHTAEVNCLSFNPYSEFIL 289
Query: 202 GSSAEDGLLNIWDYEKVGKKV 222
+ + D + +WD + K+
Sbjct: 290 ATGSADKTVALWDLRNLKLKL 310
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 126 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNG-VGSPINKFEGH 184
+P +++ + H + + + WNP +L+ S D+++ ++D + G + F GH
Sbjct: 168 TPDLRL-RGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGH 226
Query: 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
+A V V W S+FGS A+D L IWD
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWD 256
Score = 45 (20.9 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P +LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGCLLSASDDHTICLWDI 207
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 178 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 236
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 237 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 291
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 292 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 349
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 350 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 378
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 140 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 199
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 200 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 256
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 257 GSADKTVALWDLRNLKLKL 275
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 138 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 172
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 344 (126.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 344 (126.2 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 45 (20.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P +LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLWDI 207
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 344 (126.2 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 45 (20.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P +LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLWDI 207
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 344 (126.2 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 77/216 (35%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 45 (20.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P +LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLWDI 207
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 334 (122.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 75/216 (34%), Positives = 114/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G VG + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
+ A+++C+ +NP + ++ +GS D +V ++D RNL ++ FE H + VQWS
Sbjct: 272 YTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ IY +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENIYNDED 413
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA----RVGTSPVIK-VEKAHDADLHCVD 143
GH+ +++ P + S DD + LWD + G K + H A + V
Sbjct: 175 GHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + ++A V C+ ++P+ + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAYTAEVNCLSFNPNSEFILAS 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSPDKTVALWDLRNLKLKL 310
Score = 53 (23.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P Y+LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPYLSGYLLSASDDHTICLWDI 207
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 343 (125.8 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 77/224 (34%), Positives = 115/224 (51%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKA 134
+G V + I+ GH VEDV + F SV DD L++WD R T+ P V+ A
Sbjct: 211 EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-A 269
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + V WS
Sbjct: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWS 324
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS 254
P ++ SS D LN+WD K+G++ + + P L F H GH K+ DF WN +
Sbjct: 325 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 383
Query: 255 DPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
+PW +QIW+M++ IY + D AELE
Sbjct: 384 EPWVICSVSEDNI-------MQIWQMAENIYNDEEPDIAAAELE 420
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 72/169 (42%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + S DD + LWD G V+ KA H A + V
Sbjct: 173 GHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 233 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 290 GSADKTVALWDLRNLKLKLHS------------FE--SHKDEIFQVHWS 324
Score = 43 (20.2 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ + ++LS D +V LW I
Sbjct: 171 LRGHQKEG-YGLSWNSNLKGHLLSASDDHTVCLWDI 205
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 335 (123.0 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 76/216 (35%), Positives = 113/216 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNA 253
P ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
Query: 254 SDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
++PW +Q+W+M++ I +D
Sbjct: 385 NEPWVICSVSEDNI-------MQVWQMAENINNDED 413
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 143
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 204 SAEDGLLNIWDYEKVGKKV 222
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 49 (22.3 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P ++LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 338 (124.0 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 77/224 (34%), Positives = 117/224 (52%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 134
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS 254
P ++ SS D LN+WD K+G++ + + P L F H GH K+ DF WN +
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
Query: 255 DPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
+PW +Q+W+M++ IY + D +ELE
Sbjct: 386 EPWVICSVSEDNI-------MQVWQMAENIYNDEEPDTPASELE 422
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/140 (23%), Positives = 63/140 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA------HDADLHCV 142
GH+ +++ P+ + S DD + LWD G K+ A H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS-GAPKEGKIVDAKTIFTGHTAVVEDV 233
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P +
Sbjct: 234 SWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 203 SSAEDGLLNIWDYEKVGKKV 222
+ + D + +WD + K+
Sbjct: 291 TGSADKTVALWDLRNLKLKL 310
Score = 45 (20.9 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ P +LS D ++ LW I
Sbjct: 173 LRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLWDI 207
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 196 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 255
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 256 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 309
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 310 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 368
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 369 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 412
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 52/254 (20%), Positives = 102/254 (40%)
Query: 9 DNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT-----AKSAGSSGSIIK 63
D+A+F + C +E GGK + + + + + + P K+ S +
Sbjct: 88 DDAQFDASHCDSE----KGGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFD 143
Query: 64 QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 123
+ P + P + RG H+ +++ + + S DD + LWD
Sbjct: 144 YTKHPAKPDPSGECNPDLRLRG----HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 199
Query: 124 GTSPVIKVE-KA----HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178
G V+ KA H A + V W+ L ++L + + D + ++D R SN P
Sbjct: 200 GPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPS 256
Query: 179 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238
+ + H+A V C+ ++P + + + D + +WD + K+ F+
Sbjct: 257 HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT------------FE 304
Query: 239 HAGHRDKVVDFHWN 252
H+D++ HW+
Sbjct: 305 --SHKDEIFQVHWS 316
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 163 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 197
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 196 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 255
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 256 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 309
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 310 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 368
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 369 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 412
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 51/254 (20%), Positives = 102/254 (40%)
Query: 9 DNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT-----AKSAGSSGSIIK 63
D+A+F + C ++ GGK + + + + + + P K+ S +
Sbjct: 88 DDAQFDASHCDSD----KGGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFD 143
Query: 64 QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 123
+ P + P + RG H+ +++ + + S DD + LWD
Sbjct: 144 YTKHPAKPDPSGECNPDLRLRG----HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 199
Query: 124 GTSPVIKVE-KA----HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178
G V+ KA H A + V W+ L ++L + + D + ++D R SN P
Sbjct: 200 GPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR---SNTTSKPS 256
Query: 179 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238
+ + H+A V C+ ++P + + + D + +WD + K+ F+
Sbjct: 257 HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT------------FE 304
Query: 239 HAGHRDKVVDFHWN 252
H+D++ HW+
Sbjct: 305 --SHKDEIFQVHWS 316
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 163 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 197
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 378 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 421
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 325
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 172 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 206
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 249 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 308
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 309 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 362
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 363 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 421
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 422 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 465
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 218 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 277
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 278 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 334
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 335 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 369
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 216 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 250
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 378 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 421
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 325
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 172 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 206
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 378 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 421
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 325
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 172 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 206
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 249 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 308
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 309 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 362
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 363 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 421
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 422 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 465
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 218 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 277
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 278 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 334
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 335 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 369
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 216 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 250
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 378 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 421
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 325
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 172 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 206
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 79/231 (34%), Positives = 119/231 (51%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD-EVLA-ELE 296
DF WN ++PW +QIW+M++ IY ++ +V A ELE
Sbjct: 378 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTASELE 421
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 325
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 172 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 206
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/231 (33%), Positives = 117/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 378 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 421
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 325
Score = 42 (19.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 172 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 206
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 338 (124.0 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 78/231 (33%), Positives = 116/231 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 248 DFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D ELE
Sbjct: 378 DFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTPELE 421
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHT------------FE--SHKDEIFQVHWS 325
Score = 42 (19.8 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 38
L GHQ + L+ ++LS D +V LW I
Sbjct: 172 LRGHQKEG-YGLSWNSNLSGHLLSASDDHTVCLWDI 206
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 76/217 (35%), Positives = 116/217 (53%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
IYNGH VEDV + F SVGDD L++WD R GT P+ VE AH+++++C+ +N
Sbjct: 219 IYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVE-AHNSEVNCLSFN 277
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
P + L+ TGS D +V ++D RNL G+ ++ H+ V VQ+SP +V S
Sbjct: 278 PFCEFLVATGSTDKTVALWDMRNL-----GNRLHSLISHTDEVFQVQFSPHNETVLASCG 332
Query: 206 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXX 265
D +N+WD ++G++ + + P L F H GH K+ DF WN +DPW
Sbjct: 333 SDRRVNVWDLSRIGEE-QNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAED 391
Query: 266 XXXXXXXXXLQIWRMSDLIYRPQDEVLAELEKFKAHV 302
LQIW+M++ IY +++ L + A +
Sbjct: 392 NI-------LQIWQMAENIYNDREDDLENSKVTNAQI 421
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 126 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT-SNGVGSPINKFEGH 184
SP +K+ H + + + WNP + +L+ S D S+ M+D + S+ +N + GH
Sbjct: 165 SPNLKLT-GHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGH 223
Query: 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
++ V V W + FGS +D L IWD + G K
Sbjct: 224 TSIVEDVAWHYIHDTFFGSVGDDKKLMIWD-TRTGTK 259
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 78/227 (34%), Positives = 116/227 (51%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 129
D N A + R I+ GHE VEDV + F SVGDD L++WD R P
Sbjct: 201 DINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNV-PGH 259
Query: 130 KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVL 189
++ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H +
Sbjct: 260 AID-AHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLK-----LHSFESHRDEIF 313
Query: 190 CVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249
VQWSP ++ SS D L++WD K+G+ + + P L F H GH K+ DF
Sbjct: 314 QVQWSPHNETILASSGTDKRLHVWDLSKIGED-QTAEDAEDGPPELLFIHGGHTAKISDF 372
Query: 250 HWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRP-QDEVLAEL 295
WN ++PW LQ+W+M+D IY +DE A++
Sbjct: 373 SWNPNEPWVVCSVSEDNI-------LQVWQMADNIYNDVEDETPADM 412
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 73/207 (35%), Positives = 109/207 (52%)
Query: 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 143
+ ++ GHE VEDV + F SVGDD L++WD R T P ++ AH A+++C+
Sbjct: 215 KDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTST-PGHCID-AHSAEVNCLA 272
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
+NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ S
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMK-----LHSFESHRDEIFQVQWSPHNETILAS 327
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXX 263
S D L++WD K+G+ + + P L F H GH K+ DF WN ++PW
Sbjct: 328 SGTDKRLHVWDLSKIGED-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVS 386
Query: 264 XXXXXXXXXXXLQIWRMSDLIYRPQDE 290
LQ+W+M+D IY DE
Sbjct: 387 EDNI-------LQVWQMADNIYNEVDE 406
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 51/241 (21%), Positives = 95/241 (39%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQ--DHITSSATDPATAKSAGS--- 57
L GH + L+ P E +LS D++V W I ++ K S
Sbjct: 168 LKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVE 226
Query: 58 --SGSIIKQSPKPGDGNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD 112
+ ++ G+DK D + P + H V + F P S +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSA 286
Query: 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
D + LWD R + E +H ++ V W+P ++ ++ + D + ++D + +
Sbjct: 287 DKTVALWDLRNLRMKLHSFE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGED 345
Query: 173 GV------GSPINKF--EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY-EKVGKKVE 223
G P F GH+A + W+P++ V S +ED +L +W + + +V+
Sbjct: 346 QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVD 405
Query: 224 Q 224
+
Sbjct: 406 E 406
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 73/207 (35%), Positives = 109/207 (52%)
Query: 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 143
+ ++ GHE VEDV + F SVGDD L++WD R T P ++ AH A+++C+
Sbjct: 215 KDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTST-PGHCID-AHSAEVNCLA 272
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
+NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ S
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMK-----LHSFESHRDEIFQVQWSPHNETILAS 327
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXX 263
S D L++WD K+G+ + + P L F H GH K+ DF WN ++PW
Sbjct: 328 SGTDKRLHVWDLSKIGED-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVS 386
Query: 264 XXXXXXXXXXXLQIWRMSDLIYRPQDE 290
LQ+W+M+D IY DE
Sbjct: 387 EDNI-------LQVWQMADNIYNEVDE 406
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 51/241 (21%), Positives = 95/241 (39%)
Query: 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQ--DHITSSATDPATAKSAGS--- 57
L GH + L+ P E +LS D++V W I ++ K S
Sbjct: 168 LKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVE 226
Query: 58 --SGSIIKQSPKPGDGNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD 112
+ ++ G+DK D + P + H V + F P S +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSA 286
Query: 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
D + LWD R + E +H ++ V W+P ++ ++ + D + ++D + +
Sbjct: 287 DKTVALWDLRNLRMKLHSFE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGED 345
Query: 173 GV------GSPINKF--EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY-EKVGKKVE 223
G P F GH+A + W+P++ V S +ED +L +W + + +V+
Sbjct: 346 QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVD 405
Query: 224 Q 224
+
Sbjct: 406 E 406
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 75/224 (33%), Positives = 116/224 (51%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKA 134
+G V + I+ GH VEDV + F SV DD L++WD R T+ P V+ A
Sbjct: 212 EGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-A 270
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + V WS
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWS 325
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS 254
P ++ SS D LN+WD K+G++ + + P L F H GH K+ DF WN +
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 384
Query: 255 DPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQDEVL--AELE 296
+PW +QIW+M++ IY ++ + +ELE
Sbjct: 385 EPWVICSVSEDNI-------MQIWQMAENIYNDEEPDIPASELE 421
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHS------------FE--SHKDEIFQVHWS 325
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 74/224 (33%), Positives = 116/224 (51%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKA 134
+G V + ++ GH VEDV + F SV DD L++WD R T+ P V+ A
Sbjct: 212 EGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-A 270
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + V WS
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWS 325
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS 254
P ++ SS D LN+WD K+G++ + + P L F H GH K+ DF WN +
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 384
Query: 255 DPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQDEVL--AELE 296
+PW +QIW+M++ IY ++ + +ELE
Sbjct: 385 EPWVICSVSEDNI-------MQIWQMAENIYNDEEPDIPASELE 421
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVD 143
GH+ +++ + + S DD + LWD G V+ KA H A + V
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVA 233
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTR---SNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 290
Query: 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ D + +WD + K+ F+ H+D++ HW+
Sbjct: 291 GSADKTVALWDLRNLKLKLHS------------FE--SHKDEIFQVHWS 325
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 77/232 (33%), Positives = 117/232 (50%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 127
D N +G V + ++ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKP 264
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 188 VL-CVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH K+
Sbjct: 319 IFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKI 377
Query: 247 VDFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
DF WN ++PW +QIW+M++ IY + D +ELE
Sbjct: 378 SDFSWNPNEPWVICSVSEDNI-------MQIWQMAENIYNDEESDVTTSELE 422
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 42/177 (23%), Positives = 75/177 (42%)
Query: 52 AKSAGSSGSIIKQSPK-PGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSV 110
A SSG ++ K P + P + RG H+ +++ + + S
Sbjct: 140 ATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRG----HQKEGYGLSWNSNLSGHLLSA 195
Query: 111 GDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVDWNPLDDNLILTGSADNSVRMFD 165
DD + LWD G V+ KA H A + V W+ L ++L + + D + M+D
Sbjct: 196 SDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWD 255
Query: 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 222
R SN P + + H+A V C+ ++P + + + D + +WD + K+
Sbjct: 256 TR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 72/219 (32%), Positives = 113/219 (51%)
Query: 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADL 139
+ + I+ GH VEDV + F SV DD L++WD R TS AH A++
Sbjct: 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280
Query: 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 199
+C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP +
Sbjct: 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNET 335
Query: 200 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXX 259
+ SS D L++WD K+G++ + + P L F H GH K+ DF WN ++PW
Sbjct: 336 ILASSGTDRRLHVWDLSKIGEE-QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWII 394
Query: 260 XXXXXXXXXXXXXXXLQIWRMSDLIYRPQD-EVLA-ELE 296
+Q+W+M++ +Y ++ E+ A ELE
Sbjct: 395 CSVSEDNI-------MQVWQMAENVYNDEEPEIPASELE 426
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 33/141 (23%), Positives = 64/141 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP----VIKVEK---AHDADLHC 141
GH+ +++ P+ S DD + LWD + +P VI + H A +
Sbjct: 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWD--INATPKEHRVIDAKNIFTGHTAVVED 236
Query: 142 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 201
V W+ L ++L + + D + ++D RN N P + + H+A V C+ ++P +
Sbjct: 237 VAWHLLHESLFGSVADDQKLMIWDTRN---NNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293
Query: 202 GSSAEDGLLNIWDYEKVGKKV 222
+ + D + +WD + K+
Sbjct: 294 ATGSADKTVALWDLRNLKLKL 314
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 293 (108.2 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 69/223 (30%), Positives = 110/223 (49%)
Query: 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--GTSPVIKVEKAHDA 137
S+ + I+ HE VEDV + F SVGDD L++WD R + PV V AH
Sbjct: 216 SLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVV-AHSM 274
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197
+++C+ +NP ++ ++ TGS D +V++FD R L++ ++ F+ H V V W+P
Sbjct: 275 EVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLST-----ALHTFDSHKEEVFQVGWNPKN 329
Query: 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPW 257
++ S L +WD ++ ++ + + P L F H GH K+ DF WN + W
Sbjct: 330 ETILASCCLGRRLMVWDLSRIDEE-QTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDW 388
Query: 258 XXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQDEVLAELEKFKA 300
LQIW+M++ IY +D+ E E KA
Sbjct: 389 VISSVAEDNI-------LQIWQMAENIYHDEDDAPGE-EPSKA 423
Score = 45 (20.9 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 4 LTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSI 38
L GH + L+ + ++LSG D + LW I
Sbjct: 174 LRGHSSEG-YGLSWSKFKQGHLLSGSDDAQICLWDI 208
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 64/206 (31%), Positives = 111/206 (53%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
+Y GHE + DV++ + F S G+D L++WD R T+ + K H+ +++ + +N
Sbjct: 212 VYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTR--TNQMQHQVKVHEREVNYLSFN 269
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
P ++ ++ T S+D++V +FD R L + P++ H V V+W P+ +V SS
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNA-----PLHVMSSHEGEVFQVEWDPNHETVLASSG 324
Query: 206 EDGLLNIWDYEKVGKK-VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXX 264
ED L +WD +VG++ +E + P L F H GH+ K+ DF WN ++PW
Sbjct: 325 EDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAE 384
Query: 265 XXXXXXXXXXLQIWRMSDLIYRPQDE 290
LQ+W+M++ IYR +++
Sbjct: 385 DNS-------LQVWQMAESIYRDEED 403
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
HD + + + W+P + +L+GS D + ++D + V + + +EGH +A+ V W
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 195 PDKSSVFGSSAEDGLLNIWDYE--KVGKKVEQGPRTTNY 231
++FGS+ EDG L IWD ++ +V+ R NY
Sbjct: 227 MKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNY 265
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00084
Identities = 42/172 (24%), Positives = 78/172 (45%)
Query: 4 LTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSI----QDHITSSATDPATAKSAGSS 58
L GH D + L+ P E Y+LSG +D+ + LW + QD + ++ +SA +
Sbjct: 164 LVGH-DKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIAD 222
Query: 59 GSI-IKQSPKPG----DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDD 113
S +K G DG D + + HE V ++F P + + D
Sbjct: 223 VSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSD 282
Query: 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165
S + L+D R +P + V +H+ ++ V+W+P + ++ + D + ++D
Sbjct: 283 STVALFDLRKLNAP-LHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 66/183 (36%), Positives = 98/183 (53%)
Query: 110 VGDDSCLILWDARVG-TS-PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167
V DD L++WD R TS P V+ AH A+++C+ +NP + ++ TGSAD +V ++D R
Sbjct: 1 VADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 59
Query: 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227
NL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P
Sbjct: 60 NLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPE 112
Query: 228 TT-NYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYR 286
+ P L F H GH K+ DF WN ++PW +Q+W+M++ IY
Sbjct: 113 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI-------MQVWQMAENIYN 165
Query: 287 PQD 289
+D
Sbjct: 166 DED 168
Score = 105 (42.0 bits), Expect = 0.00091, P = 0.00091
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 20 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 78
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 194
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 79 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 138
Query: 195 PDKSSVFGSSAEDGLLNIW 213
P++ V S +ED ++ +W
Sbjct: 139 PNEPWVICSVSEDNIMQVW 157
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 258 (95.9 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 64/211 (30%), Positives = 94/211 (44%)
Query: 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI-KVEKAHDADL 139
+ P Y+ H D V DV F P SV DD L + D R+ KV +AH +
Sbjct: 225 ISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAI 284
Query: 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 199
+ V NP +D L+ T SAD +V ++D RN ++ EGH V ++WSP
Sbjct: 285 NAVAINPFNDYLLATASADKTVALWDLRNPYQR-----LHTLEGHEDEVYGLEWSPHDEP 339
Query: 200 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG-LFFQHAGHRDKVVDFHWNASDPWX 258
+ SS+ D + IWD EK+G+ EQ P + L F H GH +++ +F W ++ W
Sbjct: 340 ILASSSTDRRVCIWDLEKIGE--EQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWV 397
Query: 259 XXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
IW + P+D
Sbjct: 398 VGSLADDNILQIWSPSRVIWGRDHVQVSPRD 428
Score = 60 (26.2 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 3 ILTGHQDNAE-FALAMCPTEPYVLS-GGKDKSVVLWSIQDH-ITSSAT 47
+L GH AE F L P P L+ G +D+ + LW +Q TSS T
Sbjct: 177 VLKGH--TAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSET 222
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 62/176 (35%), Positives = 94/176 (53%)
Query: 117 ILWDARVG-TS-PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGV 174
++WD R TS P V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL
Sbjct: 1 MIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-- 57
Query: 175 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPA 233
++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P
Sbjct: 58 ---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPP 112
Query: 234 GLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXXLQIWRMSDLIYRPQD 289
L F H GH K+ DF WN ++PW +Q+W+M++ IY +D
Sbjct: 113 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI-------MQVWQMAENIYNDED 161
Score = 105 (42.0 bits), Expect = 0.00074, P = 0.00074
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 13 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 71
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 194
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 72 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 131
Query: 195 PDKSSVFGSSAEDGLLNIW 213
P++ V S +ED ++ +W
Sbjct: 132 PNEPWVICSVSEDNIMQVW 150
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 267 (99.0 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 61/201 (30%), Positives = 94/201 (46%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P+ + GH EDV+F F SVGDD L LWD R + V H A+++C+
Sbjct: 213 PQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAV--GHTAEVNCI 270
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
+NP + ++ TGS D +V ++D RN+ + + H+ + V +SP +V
Sbjct: 271 TFNPFSEYILATGSVDKTVALWDMRNMRKK-----MYTLKHHNDEIFQVSFSPHYETVLA 325
Query: 203 SSAEDGLLNIWDYEKVGKKVEQGPRTTN-YPAGLFFQHAGHRDKVVDFHWNASDPWXXXX 261
SS D + +WD K+ +++ P + F HAGH KV DF WN + PW
Sbjct: 326 SSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICS 385
Query: 262 XXXXXXXXXXXXXLQIWRMSD 282
LQ+W +S+
Sbjct: 386 SDEFNA-------LQVWEVSN 399
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 38/134 (28%), Positives = 61/134 (45%)
Query: 127 PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD-RRNLTSNGVGSPINKFEGHS 185
P +++ K H+ + + + W+ + +LT D + +D N T +G P +KF+GHS
Sbjct: 163 PQLRL-KGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHS 221
Query: 186 AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK-------VGKKVEQGPRTTNYPAGLFFQ 238
+ V + + VFGS +D LN+WD + VG E T N P +
Sbjct: 222 SNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFN-PFSEYIL 280
Query: 239 HAGHRDKVVDFHWN 252
G DK V W+
Sbjct: 281 ATGSVDKTVAL-WD 293
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 259 (96.2 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 64/219 (29%), Positives = 103/219 (47%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG--TSPVIKVEKAHDADLH 140
P Y H V DV P + +V DD L + D RV T E H ++
Sbjct: 206 PVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAIN 265
Query: 141 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200
+ +NP + ++ TGSAD ++ ++D RNL + ++ E H+ +V + W P + +V
Sbjct: 266 AIAFNPAAETVLATGSADKTIGLWDLRNLKTK-----LHTLENHTDSVTSISWHPFEEAV 320
Query: 201 FGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNASDPWXX 259
S++ D + WD + G+ EQ P + P L F H GH +++ DF WN +DPW
Sbjct: 321 LASASYDRKIMFWDLSRAGE--EQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVL 378
Query: 260 XXXXXXXXXXXXXXXLQIWRMSDLIY-RPQDEV-LAELE 296
LQ+W+++D I + ++V ELE
Sbjct: 379 CSAAEDNL-------LQVWKVADAIVGKDMEDVPTEELE 410
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 54/171 (31%), Positives = 87/171 (50%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
++ H +VED+ + P+ A F S D + +WD R + ++ +AH +D++ + WN
Sbjct: 268 FSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNR 327
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ IL+G D ++++D R S G P+ F+ HSA V VQWSP SSVF +S
Sbjct: 328 TEP-FILSGGDDGLLKVWDLRQFQS---GRPVASFKQHSAPVTSVQWSPVDSSVFAASGA 383
Query: 207 DGLLNIWDYEKVGKKVE-QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
D +++ WD + Q P L F H G ++ V + HW+ P
Sbjct: 384 DDVISQWDLSVESCDMGGQAEDVKQLPPQLLFLHQGQKE-VKELHWHPQIP 433
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 251 (93.4 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 74/260 (28%), Positives = 123/260 (47%)
Query: 24 VLSGGKDKSVVLWSIQDHITSSATDPATAKSAG-----SSGSI----IKQSPK------P 68
V + ++SV +W+I +H+ + + K S+ SI + SPK
Sbjct: 209 VATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLAT 268
Query: 69 GDGNDK-----AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 123
GD N+ A++ + GH ++VED+ + PS + F S D + +WD R
Sbjct: 269 GDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRK 328
Query: 124 GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG 183
P I V KAH AD++ + W+ + L+++G D S R++D R N SP++ F+
Sbjct: 329 -PKPAITV-KAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDN---SPVSDFKY 383
Query: 184 HSAAVLCVQWSP-DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN------YPAGLF 236
H+ + ++W+P ++S V SS++D + IWD+ E N YP LF
Sbjct: 384 HTGPITSIEWNPYEESQVIVSSSDDQV-TIWDFSLEEDTEEFTNANANPDDDFQYPPQLF 442
Query: 237 FQHAGHRDKVVDFHWNASDP 256
F H G D + + HW+ P
Sbjct: 443 FIHQGQHD-IKEVHWHPQIP 461
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 233 (87.1 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 53/177 (29%), Positives = 87/177 (49%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDW 144
+ GH +VED+ + P+ F S D+ + +WD R S ++ AHD D++ ++W
Sbjct: 251 FMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINW 310
Query: 145 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
+ + +L+G D +++++D R S GSP+ F+ H A + V+W P S VF +S
Sbjct: 311 SRREP-FLLSGGDDGALKIWDLRQFKS---GSPVATFKQHVAPITSVEWHPQDSGVFAAS 366
Query: 205 AEDGLLNIWDYEKVGKKVEQG-----PRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
D + WD V + E G P + P L F H G D + + HW+ P
Sbjct: 367 GADNQITQWDLA-VERDPEAGDTETDPGLADLPQQLLFVHQGETD-LKELHWHPQCP 421
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 110 VGDDSCL--ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167
V D L L D + P+ H + +DW+P +LTG ++ ++
Sbjct: 181 VDDPQALATFLRDEQARVKPIFTFA-GHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPT 239
Query: 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
+ S V F GH+ +V +QWSP + +VF S + D + IWD K
Sbjct: 240 DGGSWHVDQ--RPFMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK 291
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 232 (86.7 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 54/175 (30%), Positives = 86/175 (49%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--GTSPVIKVEKAHDADLHCVDWNP 146
GH +VED+ + P+ F S D+ + +WD R G + ++ AHD D++ + W+
Sbjct: 259 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSR 318
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 319 REP-FLLSGGDDGALKVWDLRQFKS---GSPVATFKQHMAPVTSVEWHPQDSGVFAASGA 374
Query: 207 DGLLNIWDYEKVGKKVEQGPRTTN-----YPAGLFFQHAGHRDKVVDFHWNASDP 256
D + WD V + E G T+ P L F H G D + + HW+ P
Sbjct: 375 DNQITQWDLA-VERDPESGETETDPGLAALPQQLLFVHQGETD-LKELHWHPQCP 427
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ L D + P+ H + +DW+P +LTG +V ++ S V
Sbjct: 195 IFLRDEQARIKPIFSFA-GHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVD 253
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
F GH+ +V +QWSP + +VF S + D + IWD
Sbjct: 254 Q--RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWD 290
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 232 (86.7 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 54/175 (30%), Positives = 86/175 (49%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 146
GH +VED+ + P+ F S D+ + +WD R S ++ AHD D++ ++W+
Sbjct: 259 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSH 318
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 319 REP-FLLSGGDDGALKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 374
Query: 207 DGLLNIWDYEKVGKKVEQG-----PRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
D + WD V + E G P + P L F H G D + + HW+ P
Sbjct: 375 DNQITQWDLA-VERDPEAGDAETDPGLADLPQQLLFVHQGETD-LKELHWHPQCP 427
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 110 VGDDSCL--ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167
V D L L D + P+ H + +DW+P +LTG ++ ++
Sbjct: 187 VDDPQALATFLRDEQTRMKPIFAFS-GHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT 245
Query: 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
+ S V F GH+ +V +QWSP + +VF S + D + IWD K
Sbjct: 246 DGGSWHVDQ--RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK 297
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 231 (86.4 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 54/175 (30%), Positives = 86/175 (49%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--GTSPVIKVEKAHDADLHCVDWNP 146
GH +VED+ + P+ F S D+ + +WD R G + ++ AHD D++ + W+
Sbjct: 258 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSR 317
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 318 REP-FLLSGGDDGTLKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 373
Query: 207 DGLLNIWDYEKVGKKVEQGPRTTN-----YPAGLFFQHAGHRDKVVDFHWNASDP 256
D + WD V + E G T+ P L F H G D + + HW+ P
Sbjct: 374 DNQITQWDLA-VERDPESGETETDPGLAALPQQLLFVHQGETD-LKELHWHPQCP 426
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ L D + P+ H + +DW+P +LTG ++ ++ + S V
Sbjct: 194 IFLRDEQARVKPIFSFA-GHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVD 252
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
F GH+ +V +QWSP + +VF S + D + IWD
Sbjct: 253 Q--RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWD 289
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 229 (85.7 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 52/174 (29%), Positives = 84/174 (48%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 146
GH +VED+ + P+ F S D+ + +WD R S ++ AHD D++ + W+
Sbjct: 259 GHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSR 318
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 319 REP-FLLSGGDDGALKIWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 374
Query: 207 DGLLNIWDY----EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
D + WD + VE P + P L F H G + + + HW+ P
Sbjct: 375 DHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGETE-LKELHWHPQCP 427
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
L D + P+ H + +DW+P +LTG ++ ++ + S V
Sbjct: 197 LRDEQAQMKPIFSFA-GHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQ- 254
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
F GH+ +V +QWSP +++VF S + D + IWD K
Sbjct: 255 -RPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSK 297
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 228 (85.3 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 50/179 (27%), Positives = 90/179 (50%)
Query: 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDA 137
+VG + GH+ +VED+ + P+ S D + LWD R V V+KAH++
Sbjct: 265 AVGANPL-TGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHES 323
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197
D++ + WN +NLI++G D ++++ + + G P+ F+ H++ + V W P +
Sbjct: 324 DVNVISWNR-HENLIVSGGDDGELKIWSLKTIQ---FGQPVALFKYHNSPITSVDWHPHE 379
Query: 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
++ F +S ED IWD + + + P L F H G +++V + HW+ P
Sbjct: 380 TTTFMASGEDDQTTIWD---IATEADGQTNIEGVPPQLMFVHMG-QNEVKEVHWHQQIP 434
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 226 (84.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 53/175 (30%), Positives = 84/175 (48%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 146
GH +VED+ + P+ F S D+ + +WD R S ++ AH+ D++ + W+
Sbjct: 258 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSR 317
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 318 -QEPFLLSGGDDGALKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 373
Query: 207 DGLLNIWDYEKVGKKVEQG-----PRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
D + WD V + E G P P L F H G D + + HW+ P
Sbjct: 374 DNQITQWDLA-VERDPEAGDTETDPGLVGLPQQLLFVHQGETD-LKELHWHPQCP 426
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 110 VGDDSCL--ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167
V D L L D + P+ H + +DW+P +LTG ++ ++
Sbjct: 186 VDDPQALATFLRDEQARVKPIFAFS-GHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT 244
Query: 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
+ S V F GH+ +V +QWSP + +VF S + D + IWD K
Sbjct: 245 DSGSWHVDQ--RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK 296
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 220 (82.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 53/174 (30%), Positives = 83/174 (47%)
Query: 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA-DLHCVDWNPLD 148
H VED+ + PS F S D +WD R AH D++ + WN
Sbjct: 290 HTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRV 349
Query: 149 DNLILTGSADNSV-RMFDRRNL-TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
NL+ TG ADN V ++D R+L +S+ V +P+ F+ H A + ++W P++ SV G
Sbjct: 350 PNLLATG-ADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGA 408
Query: 207 DGLLNIWDYEKVGKKVEQGPRTT----NYPAGLFFQHAGHRDKVVDFHWNASDP 256
D +++WD + EQ R + P L F H G ++ + + HW+ P
Sbjct: 409 DNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQE-IKEMHWHRQIP 461
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 121 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 180
+R SP+ V + H + + +DW+P + +L+ S DN+ +F + ++ G + +
Sbjct: 232 SRKENSPLYTVNR-HKTEGYALDWSPFEYSLL---SGDNANEIFLTK-YSNGGWQTDSSP 286
Query: 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235
F H+AAV +QWSP + +VF S + DG IWD V K + T N G+
Sbjct: 287 FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWD---VRNKQKTSALTVNAHPGV 338
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 218 (81.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 53/180 (29%), Positives = 89/180 (49%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
+ GH +VED+ + P+ F S D + +WD R+G SP + KAH+AD++ + WN
Sbjct: 265 FAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSF-KAHNADVNVISWNR 323
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
L ++ +GS D + + D R + G + + FE H + ++WS ++S ++
Sbjct: 324 LASCMLASGSDDGTFSIRDLRLI--KGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSG 381
Query: 207 DGLLNIWDY--EK-VGKKVEQGPRTT-------NYPAGLFFQHAGHRDKVVDFHWNASDP 256
D L IWD EK ++ E +T + P L F H G +D + + HW+ P
Sbjct: 382 DNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQKD-LKELHWHNQIP 440
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 41 HITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFC 100
HI S D + S + + +G D + + P ++GH+D + +
Sbjct: 173 HICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWS 232
Query: 101 PSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTGSAD 158
P++A S GD +I LW+ G+ V + A H A + + W+P ++N+ + S D
Sbjct: 233 PATAGRLLS-GDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVD 291
Query: 159 NSVRMFDRRNLTSNGVG-SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
SV ++D R +G SP F+ H+A V + W+ S + S ++DG +I D
Sbjct: 292 GSVAVWDIR------LGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRD 342
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 44/175 (25%), Positives = 79/175 (45%)
Query: 65 SPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD---- 120
S D D+A+ P++ R + H V + P ++ S D + +WD
Sbjct: 135 SDSDDDDGDEASKTPNIQVRRV--AHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSH 192
Query: 121 ----------ARVGTSPVIKVE-----KAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165
+ GTSPV+ H + + +DW+P +L+G + + +++
Sbjct: 193 LNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWE 252
Query: 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220
+ + PI F GH+A+V +QWSP + +VF S + DG + +WD ++GK
Sbjct: 253 PAS--GSWAVDPI-PFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI-RLGK 303
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 208 (78.3 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDWNPLDD 149
+D V DV + + F SV +DS + L+DAR + V+ A ++ ++ + ++P +
Sbjct: 186 KDIVNDVKWHQFNGNLFASVSEDSHVYLFDAR--DNKVVSQYYAESSNGINSLAFSPFAE 243
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 209
NL+ G+ +++ + D R L N ++ GHS + C+++SP + + ++D
Sbjct: 244 NLVAIGNTSSNINLLDLRKLGENS--GLLHTMMGHSEGITCMEFSPHHDGILATGSQDRR 301
Query: 210 LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPW 257
+ IWD KVG++ +Q P LF HAGH V D W W
Sbjct: 302 IIIWDLFKVGEEQQQEDAEDGCPE-LFMMHAGHTAGVSDLSWCPFKDW 348
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDAR-VG-TSPVIKVEKAHDADLHCVD 143
Y + + + F P A+ ++G+ S I L D R +G S ++ H + C++
Sbjct: 226 YAESSNGINSLAFSPF-AENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 144 WNPLDDNLILTGSADNSVRMFD--------RRNLTSNGVGSPINKFEGHSAAVLCVQWSP 195
++P D ++ TGS D + ++D ++ +G GH+A V + W P
Sbjct: 285 FSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
Query: 196 DKSSVFGSSAEDGLLNIWDYEK 217
K + GS A+D ++++W+ K
Sbjct: 345 FKDWMIGSVADDNIVHLWEISK 366
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 208 (78.3 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDWNPLDD 149
+D V DV + + F SV +DS + L+DAR + V+ A ++ ++ + ++P +
Sbjct: 186 KDIVNDVKWHQFNGNLFASVSEDSHVYLFDAR--DNKVVSQYYAESSNGINSLAFSPFAE 243
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 209
NL+ G+ +++ + D R L N ++ GHS + C+++SP + + ++D
Sbjct: 244 NLVAIGNTSSNINLLDLRKLGENS--GLLHTMMGHSEGITCMEFSPHHDGILATGSQDRR 301
Query: 210 LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPW 257
+ IWD KVG++ +Q P LF HAGH V D W W
Sbjct: 302 IIIWDLFKVGEEQQQEDAEDGCPE-LFMMHAGHTAGVSDLSWCPFKDW 348
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDAR-VG-TSPVIKVEKAHDADLHCVD 143
Y + + + F P A+ ++G+ S I L D R +G S ++ H + C++
Sbjct: 226 YAESSNGINSLAFSPF-AENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 144 WNPLDDNLILTGSADNSVRMFD--------RRNLTSNGVGSPINKFEGHSAAVLCVQWSP 195
++P D ++ TGS D + ++D ++ +G GH+A V + W P
Sbjct: 285 FSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
Query: 196 DKSSVFGSSAEDGLLNIWDYEK 217
K + GS A+D ++++W+ K
Sbjct: 345 FKDWMIGSVADDNIVHLWEISK 366
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 206 (77.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 49/176 (27%), Positives = 85/176 (48%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 146
GH +VED+ + P+ S D + +WD R ++ E AH +D++ + WN
Sbjct: 267 GHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNR 326
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
++ I +G D + ++D R S PI F+ H+ + V+WSP +++V S +
Sbjct: 327 -NEPFIASGGDDGYLHIWDLRQFQSK---KPIATFKHHTDHITTVEWSPAEATVLASGGD 382
Query: 207 DGLLNIWDY--EK-VGKKVE--QGPRTTN-YPAGLFFQHAGHRDKVVDFHWNASDP 256
D + +WD EK + + V+ Q N P L F H G ++ + + HW+ P
Sbjct: 383 DDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKE-IKELHWHPQLP 437
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 201 (75.8 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 51/194 (26%), Positives = 78/194 (40%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR---VGTSPVIKVEKAHDADLHCVDW 144
+ HE V DV F SV D L + D R T P V AH +H V +
Sbjct: 231 SSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVH-AHSGPIHSVAF 289
Query: 145 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
NP +D ++ T S D ++ ++D RNL ++ EGH V + +SP + + S+
Sbjct: 290 NPHNDFILATCSTDKTIALWDLRNLNQR-----LHTLEGHEDIVTKISFSPHEEPILAST 344
Query: 205 AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXX 264
+ D +WD ++G+ + + P L F H GH +D W + W
Sbjct: 345 SADRRTLVWDLSRIGED-QPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAE 403
Query: 265 XXXXXXXXXXLQIW 278
IW
Sbjct: 404 DNILQIWTPSRSIW 417
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 195 (73.7 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 53/176 (30%), Positives = 83/176 (47%)
Query: 79 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHD 136
P+VG + GHE + + P F S D L +WD + G VI AH
Sbjct: 142 PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIP---AHQ 198
Query: 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 196
A++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 199 AEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPF 253
Query: 197 KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+SV S + D + W++ K +E T + GL F +V D W+
Sbjct: 254 HASVLASCSYDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPT-QVADCSWD 308
Score = 168 (64.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ ++ + D L LWD P ++V K H +++ VDW+ +
Sbjct: 68 DGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGP-LQVYKEHAQEVYSVDWSQTRGEQ 126
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D +V+++D VG + F GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 181 RIWDVKAAGVRI 192
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 194 (73.4 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 50/159 (31%), Positives = 80/159 (50%)
Query: 79 PSVGPRGI--YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 136
P+VG R + + GHE + + P F S D L +WD + T+ V V AH
Sbjct: 142 PTVG-RSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK--TTGVRIVVPAHQ 198
Query: 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 196
A++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 199 AEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPF 253
Query: 197 KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235
+SV S + D + W++ K +E T + GL
Sbjct: 254 YASVLASCSYDFTVRFWNFSKPNPLLETVEHHTEFTCGL 292
Score = 170 (64.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ ++ + D L LWD P ++V K H +++ VDW+ +
Sbjct: 68 DALFDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGP-LQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D +V+++D VG + F+GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 181 RIWDVKTTGVRI 192
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 194 (73.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 53/177 (29%), Positives = 86/177 (48%)
Query: 79 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK-VEKAHD 136
P+VG + GHE + + P F S D L +WD + +P ++ V AH
Sbjct: 140 PAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVK---APGVRLVIPAHQ 196
Query: 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 196
A++ DW D+NL++TG+ D S++ +D RN V P+ GH+ AV V++SP
Sbjct: 197 AEILSCDWCKYDENLLVTGAVDCSLKGWDLRN-----VRQPVFILLGHTYAVRRVKFSPF 251
Query: 197 KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR-DKVVDFHWN 252
+++ S + D + WD+ K +E T + GL H+ +VVD W+
Sbjct: 252 HATLLASCSYDFTVRFWDFSKPNPLLETVEHHTEFTCGLDLSL--HKCGQVVDCAWD 306
Score = 157 (60.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ ++ + D L +WD P ++V K H + + VDW+ +
Sbjct: 66 DGLFDVTWSENNEHVLITSSGDGSLQIWDIAKPKGP-LQVYKEHTQEAYSVDWSQTRGEQ 124
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D + +++D VG + F+GH + WSP F S++ D L
Sbjct: 125 LVVSGSWDQTAKLWDP------AVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTL 178
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 179 RIWDVKAPGVRL 190
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/175 (29%), Positives = 83/175 (47%)
Query: 79 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 137
P+VG + GHE + + P F S D L +WD + T+ V V AH A
Sbjct: 137 PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--TTGVRIVIPAHQA 194
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 195 EILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 249
Query: 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+SV S + D + W++ K +E T + GL + V D W+
Sbjct: 250 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTE-VADCSWD 303
Score = 182 (69.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 40/132 (30%), Positives = 68/132 (51%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ D+
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRDEQ 121
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D +V+++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 176 RIWDVKTTGVRI 187
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 197 (74.4 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/178 (25%), Positives = 83/178 (46%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWN 145
+ GH +VE++ + P+ F S D + +WD R + SP + V K + D++ + W+
Sbjct: 299 FRGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNV-KISNTDVNVMTWS 357
Query: 146 PLDDNLILTGSADNSVRMFDRR----NLTSNG--VGSPINKFEGHSAAVLCVQWSPDKSS 199
+L+ TG+ D ++D R N +S+ SP+ F H + ++W P S
Sbjct: 358 KQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDS 417
Query: 200 VFGSSAEDGLLNIWDYE-KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
V + D + +WD ++ ++ + + P L F H + + V + HW A P
Sbjct: 418 VIAVGSADNTVTLWDLAVELDEEESREAGLADVPPQLLFVH--YMESVKEVHWQAQMP 473
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 133 KAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 191
+ H ++ + +DW+PL +LTG D + + R G + F GH+++V +
Sbjct: 252 RMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTE--GGGWVTDTRAFRGHASSVEEL 309
Query: 192 QWSPDKSSVFGSSAEDGLLNIWD 214
QWSP++ +VF S++ DG + +WD
Sbjct: 310 QWSPNEKNVFASASSDGTVKVWD 332
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 192 (72.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 79 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 137
P+VG + GHE + + P F S D L +WD + T+ V V AH A
Sbjct: 142 PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVK--TTGVRIVVPAHQA 199
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 200 EILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VQQPVFELLGHTYAIRRVKFSPFH 254
Query: 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235
+SV S + D + W++ K +E T + GL
Sbjct: 255 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGL 292
Score = 176 (67.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/132 (30%), Positives = 66/132 (50%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 68 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTARATGP-LQVFKEHTQEVYSVDWSQTRGEQ 126
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D +V+++D VG + F GH + + WSP F SS+ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTL 180
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 181 RIWDVKTTGVRI 192
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 190 (71.9 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 51/175 (29%), Positives = 82/175 (46%)
Query: 79 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 137
P+VG + GHE + + P F S D L +WD + T+ V V AH
Sbjct: 137 PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--TAGVRIVIPAHQT 194
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 195 EILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 249
Query: 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+SV S + D + W++ K +E T + GL + V D W+
Sbjct: 250 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTE-VADCSWD 303
Score = 174 (66.3 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ + + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 63 DGLFDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 121
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D +V+++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 176 RIWDVKTAGVRI 187
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 189 (71.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 51/175 (29%), Positives = 82/175 (46%)
Query: 79 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 137
P+VG + GHE + + P F S D L +WD + T+ V V AH
Sbjct: 137 PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--TTGVRIVIPAHQT 194
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 195 EILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 249
Query: 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+SV S + D + W++ K +E T + GL +V D W+
Sbjct: 250 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPT-QVADCSWD 303
Score = 175 (66.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 121
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D +V+++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 176 RIWDVKTTGVRI 187
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 189 (71.6 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 48/158 (30%), Positives = 78/158 (49%)
Query: 79 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 137
P+VG + GHE + + P F S D L +WD + ++ V V AH A
Sbjct: 142 PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--STGVRIVVPAHQA 199
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 200 EILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 254
Query: 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235
+SV S + D + W++ K +E T + GL
Sbjct: 255 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGL 292
Score = 175 (66.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 68 DGLFDVTWSENNEHILVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L+++GS D +V+++D VG + F GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 180
Query: 211 NIWDYEKVGKKV 222
IWD + G ++
Sbjct: 181 RIWDVKSTGVRI 192
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 180 (68.4 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 49/136 (36%), Positives = 70/136 (51%)
Query: 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD 138
P P + GHE+ + DV F S A+ S DD L LWD G+ +IK H
Sbjct: 59 PIAEPVQEFTGHENGISDVAFS-SDARFIVSASDDKTLKLWDVETGS--LIKTLIGHTNY 115
Query: 139 LHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS 198
CV++NP N+I++GS D +VR++D +T+ G + HS V V ++ D S
Sbjct: 116 AFCVNFNP-QSNMIVSGSFDETVRIWD---VTT---GKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 199 SVFGSSAEDGLLNIWD 214
+ SS+ DGL IWD
Sbjct: 169 LIV-SSSYDGLCRIWD 183
Score = 154 (59.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 58/225 (25%), Positives = 103/225 (45%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH + A F + P ++SG D++V +W + + + +DP TA
Sbjct: 106 IKTLIGHTNYA-FCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Query: 57 SSGSIIKQSPKPGDGNDKAAD-GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DS 114
GS+I S DG + D G + + + V V F P+ +F VG D+
Sbjct: 165 RDGSLIVSSSY--DGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG--KFILVGTLDN 220
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCVD--WNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LW+ + ++ +K H +C+ ++ + I++GS DN V M++ L S
Sbjct: 221 TLRLWN--ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE---LNSK 275
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
+ + K EGH+ V+ V P ++ + S + D + IW +K
Sbjct: 276 KL---LQKLEGHTETVMNVACHPTENLI-ASGSLDKTVRIWTQKK 316
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 177 (67.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 50/169 (29%), Positives = 81/169 (47%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR-VGTSPVIKVEKAHDADLHCVDWNPL 147
GH D + F P A F SV D L LW++ P++ +E AH ++ C DW+
Sbjct: 165 GHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIE-AHASEALCCDWSHF 223
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA--AVLCVQWSPDKSSVFGSSA 205
D N+++TG +D +R +D R + ++ FE +S AV + SP ++V S+
Sbjct: 224 DRNVLVTGGSDGLIRGWDLRKMRTH-------VFELYSGEFAVRRLACSPHSAAVLASAN 276
Query: 206 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ-HAGHRDKVVDFHWNA 253
D IW+ E+ E R T + GL + H H+ + D W++
Sbjct: 277 YDFTTRIWNLERGESAQEVNARHTEFVCGLDWNPHRTHQ--LADCGWDS 323
Score = 130 (50.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 46 ATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQ 105
AT + G S +++Q+ + N + DG S+G D + DV +CP +A
Sbjct: 29 ATSQLYGLAGGGSLFLLEQN---SNTNSSSTDGQSLGELCRLEW-SDGLFDVAWCPYAAD 84
Query: 106 EFCSVGDDSCLILWDARVGTS---------PVIKVEKAHDADLHCVDWNPL-DDNLILTG 155
+ D L +W G S P+I +++ H +++ +DW + + +L+G
Sbjct: 85 IAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQE-HKNEVYSLDWGEKWNYHTLLSG 143
Query: 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
S D +++++D S I F GH+ + ++SP +++F S + DG LN+W+
Sbjct: 144 SWDCTLKLWDCNRQNS------ITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWN 196
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 177 (67.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 43/175 (24%), Positives = 84/175 (48%)
Query: 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDD 149
+ ++ED+ + F + G D + +WD R P + V A +D++ + W+ +
Sbjct: 327 QSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVI-ASKSDVNVISWSSKIN 385
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVG--SPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+L+ +G D S ++D RN T+N SP+ ++ H + + + ++P S+ S+ED
Sbjct: 386 HLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVSSED 445
Query: 208 GLLNIWDY------EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
+ +WD E++ ++ ++ + P L F H RD V D W+ P
Sbjct: 446 NTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVH-WQRD-VKDVRWHPQIP 498
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 177 (67.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 43/175 (24%), Positives = 84/175 (48%)
Query: 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDD 149
+ ++ED+ + F + G D + +WD R P + V A +D++ + W+ +
Sbjct: 327 QSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVI-ASKSDVNVISWSSKIN 385
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVG--SPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+L+ +G D S ++D RN T+N SP+ ++ H + + + ++P S+ S+ED
Sbjct: 386 HLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVSSED 445
Query: 208 GLLNIWDY------EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
+ +WD E++ ++ ++ + P L F H RD V D W+ P
Sbjct: 446 NTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVH-WQRD-VKDVRWHPQIP 498
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 181 (68.8 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 78 GPSV-GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 136
G SV G R YN + D V DV + P F D + LWD R +SP++++ AHD
Sbjct: 231 GVSVCGSRDQYNSNSDAVRDVRWSPGDGVLFAVATDSGAIQLWDIRKSSSPILRIT-AHD 289
Query: 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 196
+ VDW+P D I++G D V++++ ++T+ P+ +F A VL V+W P
Sbjct: 290 RPCYSVDWHP-DGKHIVSGGTDRQVKVWEF-SITAERRQKPLFQFRTPQA-VLNVRWRPP 346
Query: 197 KSSVFGSSAEDGLLN--IWDYEKVGKKVEQGP-RTTNYPAGLFFQHAGHRDKVVDFHWNA 253
S S+ D + + Y+K +V R + P F + + D W++
Sbjct: 347 SWSRESDSSGDWQSSQVVTSYDKEDPRVHLWDFRRPHIP---FREFDRYDSTATDLLWHS 403
Query: 254 SD 255
D
Sbjct: 404 KD 405
Score = 130 (50.8 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 85 GIYNGHED--TVEDVTFCPSSAQEFCSVG-DDSCLILWDA-RVGTSPVIKVEKAHDADLH 140
G+ H+D TV+DV + + + + ++++D R G + + H +H
Sbjct: 140 GLSARHKDQLTVKDVKWSHGLYDQIIATAVANGRIVVYDLHRTGLE-YCRFQ-GHSRQVH 197
Query: 141 CVDWNPLDDNLILTGSADNSVRMFDRRNL-TSNGV---GSPINKFEGHSAAVLCVQWSPD 196
+ +NP +L+GS D +RM+D R + T GV GS +++ +S AV V+WSP
Sbjct: 198 RLAFNPHQPAWLLSGSQDAHIRMWDLRTVPTDRGVSVCGSR-DQYNSNSDAVRDVRWSPG 256
Query: 197 KSSVFGSSAEDGLLNIWDYEK 217
+F + + G + +WD K
Sbjct: 257 DGVLFAVATDSGAIQLWDIRK 277
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 167 (63.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 39/128 (30%), Positives = 62/128 (48%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
+ H + + P +A F SV D L +WD+R S + KAHD ++ DWN
Sbjct: 143 FREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS--LNTIKAHDHEILTCDWNK 200
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+D ++TGS D ++R++D R P GH+ AV ++ SP S+ S +
Sbjct: 201 YNDKEVVTGSVDKTIRIWDIRY-----PDRPTTILRGHTYAVRRIKCSPHSESMLASCSY 255
Query: 207 DGLLNIWD 214
D + +WD
Sbjct: 256 DMSVIVWD 263
Score = 141 (54.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 92 DTVEDVTFCPSSAQEFCSVGD---DSCLILWDARV--GTSPVIKVEKAHDADLHCVDWNP 146
DT + + C S + C V D + +WD + G P+ E+ H +++ VDWN
Sbjct: 56 DTRDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEE-HTKEVYSVDWNL 114
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ + +TGS D S+++++ R + + F H + WSP + +F S +
Sbjct: 115 VTKDTFITGSWDQSIKIWNPR------MDRSLKTFREHRYCIYSAIWSPRNAHLFASVSG 168
Query: 207 DGLLNIWD 214
D L IWD
Sbjct: 169 DRTLKIWD 176
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 69 GDGNDKAAD--GPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 125
GDG+ K D PS G P + H V V + + F + D + +W+ R+
Sbjct: 79 GDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDR 138
Query: 126 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS 185
S +K + H ++ W+P + +L + S D +++++D R+ S +N + H
Sbjct: 139 S--LKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS------LNTIKAHD 190
Query: 186 AAVLCVQWSP--DKSSVFGSSAEDGLLNIWD 214
+L W+ DK V GS D + IWD
Sbjct: 191 HEILTCDWNKYNDKEVVTGSV--DKTIRIWD 219
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 167 (63.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH + D+ + S + CS DD L +WDAR +KV + H + CV++NP
Sbjct: 81 YEGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDAR-SPYECLKVLRGHTNFVFCVNFNP 138
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
NLI++GS D ++R+++ + G + + HS + V ++ D S + S++
Sbjct: 139 -PSNLIVSGSFDETIRIWEVKT------GKCVRMIKAHSMPISSVHFNRDGSLIV-SASH 190
Query: 207 DGLLNIWD 214
DG IWD
Sbjct: 191 DGSCKIWD 198
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 52/223 (23%), Positives = 98/223 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
+++L GH N F + P ++SG D+++ +W ++ + + + P ++
Sbjct: 121 LKVLRGHT-NFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN 179
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGD-D 113
GS+I + DG+ K D G + + + V F P+ +F V D
Sbjct: 180 RDGSLIVSASH--DGSCKIWDAKE-GTCLKTLIDDKSPAVSFAKFSPNG--KFILVATLD 234
Query: 114 SCLILWDARVGTSPVIKVEKAHDADLHCVD--WNPLDDNLILTGSADNSVRMFDRRNLTS 171
S L L + T +KV H + C+ ++ + I++GS DN V ++D L +
Sbjct: 235 STLKL--SNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD---LQA 289
Query: 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + + EGH+ AV+ V P ++ + S D + IW
Sbjct: 290 RNI---LQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 159 (61.0 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP---VIKVEKAHDADLHCVDWN 145
GHE ++ D+ F + S G+D ++ W + K + + ++ +DW+
Sbjct: 202 GHESSIWDLAF-NKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWS 260
Query: 146 PLDDNLILTGSADNSVRMFDRRNL-TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
L N I+TGSAD+S+ +++ + T + + K H + V C +W+P ++ S
Sbjct: 261 SLT-NTIVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASC 319
Query: 205 AEDGLLNIWDYE 216
+DG + IW+ +
Sbjct: 320 GDDGFIKIWELQ 331
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 48/219 (21%), Positives = 92/219 (42%)
Query: 10 NAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDH---ITSSATDPATAKSAGSSGSIIK 63
N E LA C + Y+ KD K ++ S++ H + A P AG+S
Sbjct: 35 NGEI-LATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGAS---FD 90
Query: 64 QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 123
S + K+ D GH V+ V + S+ + D + +W
Sbjct: 91 ASTSIWE---KSKDELEFTHVSSLEGHTYEVKSVAW-DSTGTLLATCSRDKSIWIWQMED 146
Query: 124 GTS-PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182
+ + H D+ CV W+P ++ L+ + S D++++ + +++ +G IN
Sbjct: 147 DNDFECLSINSGHGQDIKCVLWHP-NEELLASSSYDDTIKFW--KDI--DGDWECINTLT 201
Query: 183 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
GH +++ + ++ D + S ED L+ W ++K +K
Sbjct: 202 GHESSIWDLAFNKDGDKLV-SCGEDKLVLFWKFDKENEK 239
Score = 44 (20.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 40
L GH + ++A T + + +DKS+ +W ++D
Sbjct: 111 LEGHTYEVK-SVAWDSTGTLLATCSRDKSIWIWQMED 146
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 165 (63.1 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 43/150 (28%), Positives = 69/150 (46%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHDADLHCVDWN 145
+ H V + P F S D L +WD R G++ +I AHD ++ DWN
Sbjct: 145 FKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP---AHDFEILSCDWN 201
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
DD ++ T S D +V+++D R+ P+ GH AV V++SP + S+ S +
Sbjct: 202 KYDDCILATSSVDKTVKVWDVRSYRV-----PLAVLNGHGYAVRKVKFSPHRRSLIASCS 256
Query: 206 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235
D + +WDY V + T + G+
Sbjct: 257 YDMSVCLWDYMVEDALVGRYDHHTEFAVGI 286
Score = 123 (48.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 37/129 (28%), Positives = 59/129 (45%)
Query: 92 DTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN 150
D V DV + S + ++GD S I A S I+ + H ++ VD+NP +
Sbjct: 61 DAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRD 120
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
LT S D++V+++ S + F+ H+ V W+P VF S++ D L
Sbjct: 121 SFLTSSWDDTVKLWAMDRPAS------VRTFKEHAYCVYQAVWNPKHGDVFASASGDCTL 174
Query: 211 NIWDYEKVG 219
IWD + G
Sbjct: 175 RIWDVREPG 183
Score = 114 (45.2 bits), Expect = 0.00041, P = 0.00041
Identities = 36/149 (24%), Positives = 63/149 (42%)
Query: 69 GDGNDKAADG---PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 125
GDG+ K D P P + H V+ V + P+ F + D + LW
Sbjct: 81 GDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA 140
Query: 126 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS 185
S ++ K H ++ WNP ++ + S D ++R++D R S + P + FE
Sbjct: 141 S--VRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMI-IPAHDFE--- 194
Query: 186 AAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
+L W+ + +S+ D + +WD
Sbjct: 195 --ILSCDWNKYDDCILATSSVDKTVKVWD 221
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 146 (56.5 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 341 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 397
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 398 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 449
Query: 207 DGLLNIWD 214
DG + +WD
Sbjct: 450 DGRVLLWD 457
Score = 66 (28.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
++IL GH + + P Y+LS +D +V LWS+Q
Sbjct: 296 LKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLWSLQ 333
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 153 (58.9 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 47/164 (28%), Positives = 73/164 (44%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH + V V + ++ CS D + LWD +G IK E + + ++PL+
Sbjct: 259 GHREFVSGVQWIDNTTIATCSW--DHTIKLWDLSMGG---IKTEFTGNKSFFDLSYSPLN 313
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
+I+T S D ++R++D R+ N V N + GHS V +WS +F S A D
Sbjct: 314 -GMIITASPDKNLRLYDPRSKHGNFVK---NTYLGHSQWVQTCRWSTTNEYLFVSGAYDN 369
Query: 209 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ +WDY P F+ GH DKV+ W+
Sbjct: 370 RVKLWDYRS--------------PKAPIFELIGHEDKVLACDWS 399
Score = 110 (43.8 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 39/119 (32%), Positives = 56/119 (47%)
Query: 58 SGSIIKQSPKPGDGNDKAADGPSV-GP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
+G II SP D N + D S G + Y GH V+ + ++ F S D+
Sbjct: 313 NGMIITASP---DKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDN 369
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCVDW-NPLDDNLILTGSADNSVRMFDRRNLTSN 172
+ LWD R +P+ ++ D L C DW NP IL+G +DN+VR+F R N
Sbjct: 370 RVKLWDYRSPKAPIFELIGHEDKVLAC-DWSNP---KYILSGGSDNAVRVFKSRIAVDN 424
Score = 52 (23.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSA 55
+ + GH+ +A+ P + + SG D + +WS + + + +P+ K A
Sbjct: 192 VHVCKGHERGVG-CIAVNPAKTQMASGSMDTMLKIWSTE--LQADKGEPSATKKA 243
Score = 37 (18.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 12 EFALAMCPTEPYVLSGGKDKSVVLWS 37
++ A+ + ++L+G D +V LW+
Sbjct: 112 DWVSAVQAKDGWILTGTYDNTVNLWN 137
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 159 (61.0 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVGTSPVIKVEKAHDADLHCVDWN 145
Y GH V D F P F S D +W R+ P +++ H +D+ CV W+
Sbjct: 456 YKGHNYPVWDAQFSPFG-HYFASCSHDRTARIWSMDRI--QP-LRIMAGHLSDVDCVQWH 511
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
P + N I TGS+D +VR++D + G + F GH + VL + SPD S
Sbjct: 512 P-NCNYIATGSSDKTVRLWDVQT------GECVRIFIGHRSMVLSLAMSPD-GRYMASGD 563
Query: 206 EDGLLNIWD 214
EDG + +WD
Sbjct: 564 EDGTIMMWD 572
Score = 51 (23.0 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWS 37
+L GH ++ P +VLS D ++ LWS
Sbjct: 413 LLLGHSGPV-YSATFSPPGDFVLSSSADTTIRLWS 446
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 166 (63.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 44/151 (29%), Positives = 69/151 (45%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS---PVIKVEKAHDADL 139
P ++ GH + D++ F SV DDS D RV + PVI VE +H +
Sbjct: 247 PLQLFKGHHGAINDISSIKEK-HLFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQN- 304
Query: 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 199
C+ ++P L TG DN V ++D RN ++ P KF GH+ +V +QW +
Sbjct: 305 -CIQFHPDIQTLYATGGKDNVVSLYDIRNYST-----PFRKFYGHNDSVRQLQWDWNNPD 358
Query: 200 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230
+ S D + WD + + + T+N
Sbjct: 359 ILVSCGLDKRIIFWDLKNLDEDFTYPDATSN 389
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 166 (63.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 44/151 (29%), Positives = 69/151 (45%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS---PVIKVEKAHDADL 139
P ++ GH + D++ F SV DDS D RV + PVI VE +H +
Sbjct: 247 PLQLFKGHHGAINDISSIKEK-HLFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQN- 304
Query: 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 199
C+ ++P L TG DN V ++D RN ++ P KF GH+ +V +QW +
Sbjct: 305 -CIQFHPDIQTLYATGGKDNVVSLYDIRNYST-----PFRKFYGHNDSVRQLQWDWNNPD 358
Query: 200 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230
+ S D + WD + + + T+N
Sbjct: 359 ILVSCGLDKRIIFWDLKNLDEDFTYPDATSN 389
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 147 (56.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 582 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRYHP 638
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 639 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 690
Query: 207 DGLLNIWD 214
DG + +WD
Sbjct: 691 DGRVLLWD 698
Score = 66 (28.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
++IL GH + + P Y+LS +D +V LWS+Q
Sbjct: 537 LKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLWSLQ 574
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 63/260 (24%), Positives = 108/260 (41%)
Query: 7 HQDNAEFALAMCPTEPYVLS--GGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQ 64
H++ A M P +P +++ G+ +V L+S + + S+ A S +++K
Sbjct: 117 HEEEITRARYM-PQDPNIVATINGQG-TVFLYSRSEGLQSTLKFHKDNGYALSFSTLVKG 174
Query: 65 SPKPGDGNDKAA------DGPSVGPRGIYNG-HEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
G + A G P +N H D + D + + F +V +DS L
Sbjct: 175 RLLSGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLK 234
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+ D R + + V+ + + ++ NL+ D+ V ++D RN+ P
Sbjct: 235 INDVRANNTTIDTVKCPQP--FNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKE-----P 287
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237
++ GH AV +++S V SS D L +WD +++G + P L
Sbjct: 288 LHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPE-LIM 346
Query: 238 QHAGHRDKVVDFHWNASDPW 257
HAGHR V DF N PW
Sbjct: 347 VHAGHRSSVNDFDLNPQIPW 366
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 55/219 (25%), Positives = 91/219 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIT----SSATDPATAKSAGSSG 59
L GH ++ + P Y+LSG +DK+V LWS+ H P S G
Sbjct: 521 LVGHSGTV-YSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
+ + D + P I+ GH + V+ V+F P+ F D +C +W
Sbjct: 580 HYFATASHDQTARLWSCD--HIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCR-MW 636
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G S +++ H A + + P D + TGS D + ++D G G +
Sbjct: 637 DVSTGDS--VRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDI------GTGKRLK 687
Query: 180 KFEGHSA-AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
+ GH A+ + +S + +V S D + +WD +K
Sbjct: 688 QMRGHGKNAIYSLSYSKE-GNVLISGGADHTVRVWDLKK 725
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 152 (58.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVGTSPV-----IKVEKAHDADLHCV 142
GHE TV ++F SS + F S GDD L +W + G S V + H+ ++ V
Sbjct: 177 GHESTVWSLSF-HSSGELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDV 235
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLT---SNGVGSPINKFEGHSAAVLCVQWSPDKSS 199
DW+ L+ N I T D+++R+F +T SN + I ++ H+ V V+W P +
Sbjct: 236 DWSKLN-NKIATACGDDAIRIFSIVRITISISNQLLF-IAYYQAHNHDVNVVRWHPKVDN 293
Query: 200 VFGSSAEDGLLNIW 213
+ S ++D + IW
Sbjct: 294 ILASGSDDNCIKIW 307
Score = 45 (20.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 3 ILT-GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 40
ILT GH ++A P Y+ S D ++ +WS +D
Sbjct: 39 ILTEGHTRTIR-SVAWSPCGNYLASCSFDATICIWSKKD 76
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 146 (56.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 579 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 635
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 636 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 687
Query: 207 DGLLNIWD 214
DG + +WD
Sbjct: 688 DGRVLLWD 695
Score = 66 (28.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
++IL GH + + P Y+LS +D +V LWS+Q
Sbjct: 534 LKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLWSLQ 571
Score = 44 (20.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 49 PATAKSAGS-SGSIIKQSPKPGDGNDKAADGPSVG-PRGI 86
P AG SG P G GN AA G G P+ +
Sbjct: 26 PQAGDGAGEGSGGTPNNGPNGGGGNVAAAAGGDGGTPKPV 65
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 146 (56.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 581 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 637
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 638 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 689
Query: 207 DGLLNIWD 214
DG + +WD
Sbjct: 690 DGRVLLWD 697
Score = 66 (28.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
++IL GH + + P Y+LS +D +V LWS+Q
Sbjct: 536 LKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLWSLQ 573
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 37 SIQDHITSSATDPATAK--SAGSSGSII----KQSPK-PGD-GNDKAADGPSVGP-RGIY 87
++ +T+SA PA G+SG+ + P PG G+ D P V Y
Sbjct: 146 ALLSRVTASAPGPAAPDPPGTGASGATVVSGSASGPAAPGKVGSVAVEDQPDVSAVLSAY 205
Query: 88 NGHED 92
N D
Sbjct: 206 NQQGD 210
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 146 (56.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 582 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 638
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 639 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 690
Query: 207 DGLLNIWD 214
DG + +WD
Sbjct: 691 DGRVLLWD 698
Score = 66 (28.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
++IL GH + + P Y+LS +D +V LWS+Q
Sbjct: 537 LKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLWSLQ 574
Score = 40 (19.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 37 SIQDHITSSATDPATAK--SAGSSGS-----IIKQSPKPGD-GNDKAADGPSVGP-RGIY 87
++ +T+SA PA G+SG+ + P PG G+ D P V Y
Sbjct: 147 ALLSRVTASAPGPAAPDPPGTGASGAPAVSGLATGPPAPGKVGSVAVEDQPDVSAVLSAY 206
Query: 88 NGHED 92
N D
Sbjct: 207 NQQGD 211
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 150 (57.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKVEQGPRTT 229
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 159 (61.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 58 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 113
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 114 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 166
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 167 GLCRIWD 173
Score = 131 (51.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 96 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 154
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 155 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 211
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL +
Sbjct: 212 -LKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTK 265
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 266 EI---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 159 (61.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 132 (51.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 54/222 (24%), Positives = 97/222 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 122 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 181 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL +
Sbjct: 238 -LKLWDYSKGKC--LKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTK 291
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
V + K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 292 EV---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 159 (61.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 122 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 181 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL +
Sbjct: 238 -LKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTK 291
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 292 EI---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 159 (61.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 122 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 181 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL +
Sbjct: 238 -LKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTK 291
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 292 EI---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 159 (61.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 122 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 181 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL +
Sbjct: 238 -LKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTK 291
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 292 EI---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 159 (61.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 122 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 181 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL +
Sbjct: 238 -LKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTK 291
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 292 EI---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 159 (61.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 122 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 181 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL +
Sbjct: 238 -LKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTK 291
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 292 EI---VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 159 (61.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 44/127 (34%), Positives = 65/127 (51%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ + DV + S ++ S DD L +W+ G S +K K H + C ++NP
Sbjct: 111 SGHKLGISDVAWS-SDSRLLVSGSDDKTLKVWELSTGKS--LKTLKGHSNYVFCCNFNP- 166
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
NLI++GS D SVR++D R G + HS V V ++ D S + SS+ D
Sbjct: 167 QSNLIVSGSFDESVRIWDVRT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 219
Query: 208 GLLNIWD 214
GL IWD
Sbjct: 220 GLCRIWD 226
Score = 148 (57.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 57/222 (25%), Positives = 98/222 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH N F P ++SG D+SV +W ++ + +DP +A
Sbjct: 149 LKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 207
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 114
GS+I S DG + D S G + + + V V F P+ + D++
Sbjct: 208 RDGSLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 264
Query: 115 CLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
L LWD G +K H + +C+ +++ I++GS DN V ++ NL S
Sbjct: 265 -LKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW---NLQSK 318
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
V + K +GH+ VLC P ++ + ++ E D + +W
Sbjct: 319 EV---VQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 160 (61.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 53/213 (24%), Positives = 94/213 (44%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
+L GH+ + E A+A+ +SGG DK + +W+ TS+ + ++ G
Sbjct: 200 VLRGHERSVE-AIAVNTDGTRTVSGGFDKMLKVWNTDKDDTSTVFEKTRSEKTGKK---- 254
Query: 63 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122
K D + P +GH+D + + P+SA+E +V D + +WD
Sbjct: 255 -----------KRTDIITKIPMVTLSGHKDAIVSAVWSPNSAKEVLTVSWDHTISIWDLE 303
Query: 123 V-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF 181
+ G + +KA + C +++TGS D VR++D R+ V F
Sbjct: 304 LAGQINTLAAKKAFTSISVCCS-----SGMLITGSVDPVVRLWDPRSHEGTLVKQ---SF 355
Query: 182 EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
GH + V W+ K ++F S++ D + +WD
Sbjct: 356 IGHCGWISSVFWNKVKENLFISASFDKTVKMWD 388
Score = 118 (46.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 97 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTG 155
++ C SS + D + LWD R ++K H + V WN + +NL ++
Sbjct: 320 ISVCCSSGM-LITGSVDPVVRLWDPRSHEGTLVKQSFIGHCGWISSVFWNKVKENLFISA 378
Query: 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
S D +V+M+D R SN +P+ GHS +LC WS ++ V G
Sbjct: 379 SFDKTVKMWDVR---SNK--TPLYDLVGHSDRILCCDWSVNELIVSG 420
Score = 49 (22.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 7 HQDNAEFALAMCPT--EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI 61
H++ + LA+ P E +++GG D+ ++L ++ H +S+ P T G S+
Sbjct: 154 HEEAIK-CLALLPDQKEDRIVTGGHDQVLMLSDVETHGSSTFIKP-TCVLRGHERSV 208
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 144 (55.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 42/128 (32%), Positives = 61/128 (47%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V D F P F S G D LW A P +++ H AD+ C ++P
Sbjct: 561 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVTCTRFHP 617
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N I TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 618 -NSNYIATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLAFSPN-GRFLATGAT 669
Query: 207 DGLLNIWD 214
DG + +WD
Sbjct: 670 DGRVLLWD 677
Score = 63 (27.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
++IL GH + + P Y+LS +D +V LWS+Q
Sbjct: 516 LKILYGHSGPV-YGTSFSPDRNYLLSCSEDGTVRLWSLQ 553
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 43 TSSATDPATAKSAGSSGSIIKQSPKP 68
+++A + TA SAG + S +P P
Sbjct: 40 SAAAAEGETAGSAGDASSAKPSAPGP 65
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 141 (54.7 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V D F P F S G D LW A P +++ H AD+ C ++P
Sbjct: 537 YKGHNYPVWDTQFSPFGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVTCTRFHP 593
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGS+D +VR++D N G+ + F GH + + +SP+ S +
Sbjct: 594 -NSNYVATGSSDRTVRLWDVLN------GNCVRIFTGHKGPIHSLAFSPN-GKFLASGST 645
Query: 207 DGLLNIWD 214
DG + +WD
Sbjct: 646 DGRVLLWD 653
Score = 65 (27.9 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
+IL GH + ++ P Y+LS +D ++ LWS+Q
Sbjct: 493 KILHGHSGPV-YGVSFSPDRNYLLSSSEDGTIRLWSLQ 529
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 150 (57.9 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 40/126 (31%), Positives = 62/126 (49%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH + DV + S++ S DD L +WD R G +K K H + C D+NP
Sbjct: 79 GHSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGKC--LKTLKGHSDFVFCCDFNP-P 134
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
NLI++GS D SV++++ + G + HS + V ++ + S + S + DG
Sbjct: 135 SNLIVSGSFDESVKIWEVKT------GKCLKTLSAHSDPISAVNFNCNGSLIV-SGSYDG 187
Query: 209 LLNIWD 214
L IWD
Sbjct: 188 LCRIWD 193
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 52/221 (23%), Positives = 97/221 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH D F P ++SG D+SV +W ++ S+ +DP +A +
Sbjct: 116 LKTLKGHSDFV-FCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFN 174
Query: 57 SSGSIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC 115
+GS+I G AA G + R + + V V F P+ + D++
Sbjct: 175 CNGSLIVSGSYDGLCRIWDAASGQCL--RTLADEGNPPVSFVKFSPNGKYILTATLDNT- 231
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNG 173
L LWD G +K H + +C+ ++ +++GS DN V ++ NL +
Sbjct: 232 LKLWDYSRGRC--LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW---NLQTKE 286
Query: 174 VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ + + +GH+ V+ P K+ + ++ E D + +W
Sbjct: 287 I---VQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD 138
P+ R GH + V F P+ + S D+ +I+W A G K H +
Sbjct: 27 PNYALRLTLAGHSAAISSVKFSPNG-EWLASSAADALIIIWGAYDGNCK--KTLYGHSLE 83
Query: 139 LHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS 198
+ V W+ D + +++ S D +++++D R+ G + +GHS V C ++P +
Sbjct: 84 ISDVAWSS-DSSRLVSASDDKTLKVWDMRS------GKCLKTLKGHSDFVFCCDFNPPSN 136
Query: 199 SVFGSSAEDGLLNIWDYEKVGK 220
+ S ++ + IW+ K GK
Sbjct: 137 LIVSGSFDESV-KIWEV-KTGK 156
Score = 41 (19.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 40
L GH A ++ P ++ S D +++W D
Sbjct: 35 LAGHSA-AISSVKFSPNGEWLASSAADALIIIWGAYD 70
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 161 (61.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 42/128 (32%), Positives = 63/128 (49%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V DV F P F + D LW A P +++ H D+ CV+++P
Sbjct: 555 YKGHTQPVWDVKFSPLG-HYFVTASHDQTARLW-ATDHIYP-LRIFAGHINDVDCVEFHP 611
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGS+D + RM+D G+ + F GH+ +V C+ SPD S E
Sbjct: 612 -NSNYVFTGSSDKTCRMWDVHT------GNCVRVFLGHTNSVNCLAVSPD-GRWLASGGE 663
Query: 207 DGLLNIWD 214
DG++ +WD
Sbjct: 664 DGIICVWD 671
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 57/216 (26%), Positives = 88/216 (40%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 59
L+GH A + ++ S DK++ +W +D HI S S+
Sbjct: 265 LSGH--TAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSL-STE 321
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFC-PSSAQEFCSVGDDSCLIL 118
+++ A D P+ + E C S + S DD LIL
Sbjct: 322 HVLRSG---------AYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLIL 372
Query: 119 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178
WD + T P+ K+ H ++ ++P D I T S D+SVR++D + G +
Sbjct: 373 WDPQKSTKPITKMH-GHQKVVNHASFSP-DGRCIATASFDSSVRLWDGKT------GKFL 424
Query: 179 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
GH AAV WS D S + SS++D L +WD
Sbjct: 425 ATLRGHVAAVYQCAWSTD-SRLLVSSSQDTTLKVWD 459
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
NGH+ T+ F PS++ + D LWD T P+ + K H + CV W P
Sbjct: 131 NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQT-PIATM-KGHTNWVSCVAWAP- 187
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAAVLCVQW-----SPDKSS-V 200
D ++I TGS DN++R +D + GSPI + H+ ++ + W +PD +
Sbjct: 188 DASIIATGSMDNTIRFWDPKK------GSPIGDALRRHTKPIMALCWQPLHLAPDSGPYL 241
Query: 201 FGSSAEDGLLNIWD 214
S ++D + IW+
Sbjct: 242 LASGSKDNTVRIWN 255
Score = 124 (48.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 36/130 (27%), Positives = 59/130 (45%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+ V +F P + + DS + LWD + G + + H A ++ W+
Sbjct: 386 HGHQKVVNHASFSPDG-RCIATASFDSSVRLWDGKTGK--FLATLRGHVAAVYQCAWST- 441
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE--GHSAAVLCVQWSPDKSSVFGSSA 205
D L+++ S D +++++D R S KF+ GH V V WSPD V S
Sbjct: 442 DSRLLVSSSQDTTLKVWDVR--------SKKMKFDLPGHEDQVFAVDWSPDGQRV-ASGG 492
Query: 206 EDGLLNIWDY 215
D + IW +
Sbjct: 493 ADKAVRIWSH 502
Score = 116 (45.9 bits), Expect = 0.00052, P = 0.00052
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
HD + ++P + ++TGS D + R++D T PI +GH+ V CV W+
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQT------PIATMKGHTNWVSCVAWA 186
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232
PD +S+ + + D + WD +K G + R P
Sbjct: 187 PD-ASIIATGSMDNTIRFWDPKK-GSPIGDALRRHTKP 222
Score = 52 (23.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 15 LAMCPTE-PYVL-SGGKDKSVVLWSIQ 39
L + P PY+L SG KD +V +W+++
Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVK 257
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD-ARVGTSPVIKVEKAHDADLHCVDW 144
+Y GH V DV P S F + D LW AR T P +++ H +D+ CV +
Sbjct: 391 LYRGHAYPVWDVDVSPCSLY-FSTASHDRTARLWSFAR--TYP-LRLYAGHLSDVDCVKF 446
Query: 145 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
+P + N I TGS D +VR++ R G+ + F GH VL + +SP+ S+
Sbjct: 447 HP-NSNYIATGSTDKTVRLWSTRQ------GASVRLFTGHRGPVLTLAFSPN-GKYLASA 498
Query: 205 AEDGLLNIWDYEKVG 219
ED L +WD G
Sbjct: 499 GEDQRLKLWDLASGG 513
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 144 (55.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
GH VE V ++ +E G S I +WD + +++ H A++ +D++P
Sbjct: 65 GHTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPY 120
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+ + +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D
Sbjct: 121 GE-FVASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADD 172
Query: 208 GLLNIWDYEKVGKKVEQGPRTT 229
+ +WD GK + + P T
Sbjct: 173 HTVKLWDLT-AGKMMSEFPGHT 193
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/164 (27%), Positives = 71/164 (43%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH + V V + S E CS D + +WD GT +K A + +C+ ++PL
Sbjct: 254 SGHSEAVSSVLW--SDVDEICSASWDHNIKIWDVETGT---VKSTLAGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R+ + V + H+ V V+WSP S + D
Sbjct: 309 SQRLA-SGSTDRHIRLWDPRSKDGSLV---LCSLTSHTGWVTSVKWSPSHEQQLVSGSLD 364
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251
L+ +WD R+ P + A H DKV+ W
Sbjct: 365 KLVKLWD-----------TRSCKAP---LYDLAAHSDKVLSVDW 394
>UNIPROTKB|Q5JNZ6 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0000122 HOGENOM:HOG000160330 EMBL:AL929302 UniGene:Hs.495755
HGNC:HGNC:9890 ChiTaRS:RBBP7 SMR:Q5JNZ6 Ensembl:ENST00000425696
Uniprot:Q5JNZ6
Length = 85
Score = 133 (51.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 210 LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXX 269
LN+WD K+G++ + + P L F H GH K+ DF WN ++PW
Sbjct: 1 LNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI-- 57
Query: 270 XXXXXLQIWRMSDLIYRPQ--DEVLAELE 296
+QIW+M++ IY + D +ELE
Sbjct: 58 -----MQIWQMAENIYNDEESDVTTSELE 81
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 38/173 (21%), Positives = 80/173 (46%)
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDDNL 151
++ED+ + + + F + G D + +WD R P I V KA + D++ + W+ L
Sbjct: 323 SIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISV-KASNTDVNVISWSDKIGYL 381
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGS--PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 209
+ +G + + ++D R T + + P+ +++ H A+ + ++P S+ +ED
Sbjct: 382 LASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNT 441
Query: 210 LNIWDY------EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
+ +WD E++ ++ + P L F H + +V D W+ P
Sbjct: 442 VTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFVH--WQKEVKDVKWHKQIP 492
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 61/227 (26%), Positives = 101/227 (44%)
Query: 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQS 65
GH + ++++ P V+SG +DK++ +W+I + + TD + S ++ S
Sbjct: 103 GHTSDV-LSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWV----SCVRFS 157
Query: 66 PKPGD------GNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFC-SVGDDSC 115
P P + G DKA D + R + GH V VT P + C S G D
Sbjct: 158 PNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGS--LCASGGRDGT 215
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
L+LWD T + +E A+++ + ++P + L + +S+R+FD T V
Sbjct: 216 LMLWDLNESTH-LYSLEAK--ANINALVFSP--NRYWLCAATGSSIRIFDLE--TQEKVD 268
Query: 176 SPINKFEG---HSAAVLCVQ--WSPDKSSVFGSSAEDGLLNIWDYEK 217
F G S+ C+ WSPD ++F S D L+ +W K
Sbjct: 269 ELTVDFVGVGKKSSEPECISLTWSPDGQTLF-SGWTDNLIRVWQVTK 314
Score = 130 (50.8 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 57/220 (25%), Positives = 89/220 (40%)
Query: 4 LTGHQDNAEFALAMCPTEPYVL-SGGKDKSVVLWS-IQDHITSS-ATDPATAKSAGSSGS 60
L GH +L+ P P +L SG +DKS++LW+ ++D + A T S S
Sbjct: 11 LEGHSGWVT-SLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC 69
Query: 61 IIK-QSPKPGDGN-DKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC 115
+ S + DK D + GH V V+ P + Q S D
Sbjct: 70 ALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQ-VVSGSRDKT 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSNGV 174
+ +W+ +G + H + CV ++P DNL + D +V+++D +
Sbjct: 129 IKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLR-- 185
Query: 175 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
GH+ V V SPD S+ S DG L +WD
Sbjct: 186 ----TSHYGHTGYVSAVTISPD-GSLCASGGRDGTLMLWD 220
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 135 (52.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-------GTSP---VIKVEKAHDA 137
NGH TV ++F ++ + + DD + +W + G P V + HD
Sbjct: 186 NGHSSTVWSISF-NAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDR 244
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP-----INKFEGHSAAVLCVQ 192
++ V W+ D +I +G+ D+++++F + S+ V P + K + H V VQ
Sbjct: 245 TIYSVHWSR--DGVIASGAGDDTIQLFVDSD--SDSVDGPSYKLLVKKEKAHEMDVNSVQ 300
Query: 193 WSPDKSS-VFGSSAEDGLLNIW 213
W+PDK S + S+++D ++ IW
Sbjct: 301 WAPDKESRLLASASDDKMVKIW 322
Score = 55 (24.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 40
+LTGH ++ + L PT + S D ++ +W +D
Sbjct: 134 VLTGHSEDVKMVL-WHPTMDVLFSCSYDNTIKIWCSED 170
Score = 54 (24.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
+ +L GH+ + +++ + + + G+DKSV +W IQ
Sbjct: 85 VSVLRGHESEVK-SVSWNASGSLLATCGRDKSVWIWEIQ 122
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 155 (59.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 45/129 (34%), Positives = 61/129 (47%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH D V +F P S D S LWD G ++ E H + + D
Sbjct: 385 GHSDVVNRCSFHPCGRYITTSSNDKSWR-LWDLESGGKCLLDQE-GHSDGVMGISIQS-D 441
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
+L+ TGS D VR++D R+ G PI F+GHS V+ V WSP+ + SS+ED
Sbjct: 442 GSLLATGSQDGLVRIWDLRS------GRPILYFQGHSKQVISVDWSPNGYQL-ASSSEDN 494
Query: 209 LLNIWDYEK 217
+ IWD K
Sbjct: 495 TVVIWDIRK 503
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 145 (56.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 44/164 (26%), Positives = 73/164 (44%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH + V V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHMEAVSSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251
++ +WD R+ P + A H DKV+ W
Sbjct: 365 NIVKLWD-----------TRSCKAP---LYDLAAHEDKVLSVDW 394
Score = 46 (21.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 21 EPYVLSGGKDKSVVLWSIQ 39
E ++L+G DK+ +WS++
Sbjct: 111 EEWILTGSYDKTSRIWSLE 129
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 145 (56.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 44/164 (26%), Positives = 73/164 (44%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH + V V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHMEAVSSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251
++ +WD R+ P + A H DKV+ W
Sbjct: 365 NIVKLWD-----------TRSCKAP---LYDLAAHEDKVLSVDW 394
Score = 46 (21.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 21 EPYVLSGGKDKSVVLWSIQ 39
E ++L+G DK+ +WS++
Sbjct: 111 EEWILTGSYDKTSRIWSLE 129
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 151 (58.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 56/236 (23%), Positives = 105/236 (44%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD------P--ATAKSA 55
L GH ++L P + +++S +D +++W+ +TS T P T A
Sbjct: 62 LQGHSGKV-YSLDWTPEKNWIVSASQDGRLIVWNA---LTSQKTHAIKLHCPWVMTCAFA 117
Query: 56 GSSGSI----IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFC-SV 110
+ S+ + + + N +A ++ I GH+ V + P S
Sbjct: 118 PNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQETRLITSS 177
Query: 111 GDDSCLILWDARVGTSPVI---KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167
GD +C +LWD G I + H AD+ + N + N+ ++GS D +VR++D R
Sbjct: 178 GDQTC-VLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWDIR 236
Query: 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
+ S V + + GH + V++ PD FG+ ++DG ++D + G +++
Sbjct: 237 -IASRAVRT----YHGHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDV-RTGHQLQ 285
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 150 (57.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 61/226 (26%), Positives = 98/226 (43%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-----HITSSATDPATAKSAGSS 58
+ GH + A+ P ++ + DK+V +W++ D +T + S
Sbjct: 75 IEGHTKSIS-AVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 59 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 118
SI+ S D K + P+V GH + V F P S+ D+S I
Sbjct: 134 KSIVTASD---DKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI- 189
Query: 119 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178
WD R G +K AH + V +N D +LI +GS D VR++D T+NG
Sbjct: 190 WDVRTGMC--VKTLPAHSDPVSAVSFNR-DGSLITSGSYDGLVRIWD----TANGQCVK- 241
Query: 179 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224
+ + V V++SP+ + S+ D L +WD+ K GK ++Q
Sbjct: 242 TLVDDENPPVAFVKFSPNGKYILSSNL-DNTLKLWDFGK-GKTLKQ 285
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 57/218 (26%), Positives = 96/218 (44%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSA-TDPATAKSAGSSG 59
L GH N F P V+SG D+SV +W ++ + T A +DP +A S G
Sbjct: 159 LKGHT-NYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDG 217
Query: 60 SIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 118
S+I G A+G V + + + V V F P+ + S D+ L L
Sbjct: 218 SLITSGSYDGLVRIWDTANGQCV--KTLVDDENPPVAFVKFSPNG-KYILSSNLDNTLKL 274
Query: 119 WDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 176
WD G +K + H+ + +C+ +++ I++GS D + ++ NL + V
Sbjct: 275 WD--FGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVW---NLQTKEV-- 327
Query: 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ EGH+ AV+ P ++ + + E D + IW
Sbjct: 328 -VQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 151 (58.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 34/164 (20%), Positives = 82/164 (50%)
Query: 90 HEDTVEDVTFCPSSAQEFC-SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
++ V D++ P++ + D+ ++++D R+ ++ + ++ V N
Sbjct: 250 YKSPVNDIS--PTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFT 307
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
L +GS + ++++D + P + H A++ + +SP+ +S+ S++ +
Sbjct: 308 -GLFASGSDNGKIKVWDLKKFHE-----PQHIINAHKEAIIRLNFSPNDASILASASNNR 361
Query: 209 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+N++D K+G++++ ++ P+ L F H GH V DF+WN
Sbjct: 362 FINVYDLNKIGEELD-AIDLSDGPSELIFSHGGHTQPVTDFNWN 404
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 151 (58.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 34/164 (20%), Positives = 82/164 (50%)
Query: 90 HEDTVEDVTFCPSSAQEFC-SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
++ V D++ P++ + D+ ++++D R+ ++ + ++ V N
Sbjct: 250 YKSPVNDIS--PTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFT 307
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
L +GS + ++++D + P + H A++ + +SP+ +S+ S++ +
Sbjct: 308 -GLFASGSDNGKIKVWDLKKFHE-----PQHIINAHKEAIIRLNFSPNDASILASASNNR 361
Query: 209 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+N++D K+G++++ ++ P+ L F H GH V DF+WN
Sbjct: 362 FINVYDLNKIGEELD-AIDLSDGPSELIFSHGGHTQPVTDFNWN 404
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 153 (58.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 62/242 (25%), Positives = 102/242 (42%)
Query: 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGS------SGS 60
H +N P + G ++ + LWSI+ S + S GS SG
Sbjct: 322 HTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGP 381
Query: 61 IIKQSPKPGD------GNDKAADGPSVGPRGI---YNGHEDTVEDVTFCPSSAQEFCSVG 111
+ + P + D +A SV + Y GH V DV F P F +
Sbjct: 382 VYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFG-HYFATAS 440
Query: 112 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171
D LW P ++V H +D+ CV ++P + +LTGS+D + R++D
Sbjct: 441 HDQTAQLWSCD-HIYP-LRVFAGHLSDVDCVTFHP-NSAYVLTGSSDKTCRLWDVHR--- 494
Query: 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE--QGPRTT 229
G + F GH+ V V +PD ++ + +E GL+++WD G++++ +G R
Sbjct: 495 ---GHSVRVFNGHTQPVTAVAIAPDGHTMASADSE-GLIHLWDIG-TGRRIKTMRGHRGN 549
Query: 230 NY 231
Y
Sbjct: 550 IY 551
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 51/209 (24%), Positives = 81/209 (38%)
Query: 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA----TDPATAKSAGSSGSIIKQSPKP 68
+ P Y+LS +D S LWS+ A T P + G G +
Sbjct: 383 YGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHD 442
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
+ D + P ++ GH V+ VTF P+SA D +C LWD G S
Sbjct: 443 QTAQLWSCD--HIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCR-LWDVHRGHS-- 497
Query: 129 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAV 188
++V H + V P D + + + ++ + ++D G G I GH +
Sbjct: 498 VRVFNGHTQPVTAVAIAP-DGHTMASADSEGLIHLWDI------GTGRRIKTMRGHRGNI 550
Query: 189 LCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
+ +S + S+V S D + WD K
Sbjct: 551 YSLSFSRE-STVLVSGGSDCTVRAWDVFK 578
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 152 (58.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKVEQGPRTTNYPAGLFFQH-------AGHRDKVVDFHWN 252
+WD GK + + P T P + H +G D+ + F W+
Sbjct: 173 LWDLT-AGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAG 56
++ + H N + + + +GG D V LWSI + I S T P +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 115
+ +I + G+ + D + GH+ + + F P EF + G D+
Sbjct: 73 TPEELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTN 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LWD R V + + H + C+ ++P D + + + D++V+++D LT+ G
Sbjct: 129 IKLWDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---G 179
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVEQGPRTTNYPA 233
+++F GH+ V V++ P++ + S + D + WD EK V +E P Y A
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRY-A 237
Query: 234 GLFFQHAGHRDKVVDFHWNA 253
G + KVV + A
Sbjct: 238 GSWVVGLSPPPKVVGCRYGA 257
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 152 (58.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKVEQGPRTTNYPAGLFFQH-------AGHRDKVVDFHWN 252
+WD GK + + P T P + H +G D+ + F W+
Sbjct: 173 LWDLT-AGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 62/262 (23%), Positives = 117/262 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAG 56
++ + H N + + + +GG D V LWSI + I S T P +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 115
+ +I + G+ + D + GH+ + + F P EF + G D+
Sbjct: 73 TPEELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTN 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LWD R V + + H + C+ ++P D + + + D++V+++D LT+ G
Sbjct: 129 IKLWDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---G 179
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVE--QGP-RTTN 230
+++F GH+ V V++ P++ + S + D + WD EK V +E GP R+
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 231 Y-PAGLFFQHAGHRDKVVDFHW 251
+ P G ++G +D + + W
Sbjct: 239 FNPDGCCL-YSGCQDSLRVYGW 259
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 51/219 (23%), Positives = 91/219 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAKSAGSS--G 59
LTGH E P E +++G + S+ +W ++ + + A S G
Sbjct: 59 LTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
+ + D N K D G Y GH V + F P + S DD + LW
Sbjct: 118 EFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAADDHTVKLW 174
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G ++ H ++ V+++P ++ L+ +GS+D ++R +D ++
Sbjct: 175 DLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF------QVVS 225
Query: 180 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 217
EG V V ++PD ++ S +D L + W+ E+
Sbjct: 226 CIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 152 (58.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKVEQGPRTTNYPAGLFFQH-------AGHRDKVVDFHWN 252
+WD GK + + P T P + H +G D+ + F W+
Sbjct: 173 LWDLT-AGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 62/262 (23%), Positives = 117/262 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAG 56
++ + H N + + + +GG D V LWSI + I S T P +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 115
+ +I + G+ + D + GH+ + + F P EF + G D+
Sbjct: 73 TPEELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTN 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LWD R V + + H + C+ ++P D + + + D++V+++D LT+ G
Sbjct: 129 IKLWDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---G 179
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVE--QGP-RTTN 230
+++F GH+ V V++ P++ + S + D + WD EK V +E GP R+
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 231 Y-PAGLFFQHAGHRDKVVDFHW 251
+ P G ++G +D + + W
Sbjct: 239 FNPDGCCL-YSGCQDSLRVYGW 259
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 51/219 (23%), Positives = 91/219 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAKSAGSS--G 59
LTGH E P E +++G + S+ +W ++ + + A S G
Sbjct: 59 LTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
+ + D N K D G Y GH V + F P + S DD + LW
Sbjct: 118 EFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAADDHTVKLW 174
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G ++ H ++ V+++P ++ L+ +GS+D ++R +D ++
Sbjct: 175 DLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF------QVVS 225
Query: 180 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 217
EG V V ++PD ++ S +D L + W+ E+
Sbjct: 226 CIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 152 (58.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKVEQGPRTTNYPAGLFFQH-------AGHRDKVVDFHWN 252
+WD GK + + P T P + H +G D+ + F W+
Sbjct: 173 LWDLT-AGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 62/262 (23%), Positives = 117/262 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAG 56
++ + H N + + + +GG D V LWSI + I S T P +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 115
+ +I + G+ + D + GH+ + + F P EF + G D+
Sbjct: 73 TPEELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTN 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LWD R V + + H + C+ ++P D + + + D++V+++D LT+ G
Sbjct: 129 IKLWDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---G 179
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVE--QGP-RTTN 230
+++F GH+ V V++ P++ + S + D + WD EK V +E GP R+
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 231 Y-PAGLFFQHAGHRDKVVDFHW 251
+ P G ++G +D + + W
Sbjct: 239 FNPDGCCL-YSGCQDSLRVYGW 259
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 51/219 (23%), Positives = 91/219 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAKSAGSS--G 59
LTGH E P E +++G + S+ +W ++ + + A S G
Sbjct: 59 LTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
+ + D N K D G Y GH V + F P + S DD + LW
Sbjct: 118 EFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAADDHTVKLW 174
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G ++ H ++ V+++P ++ L+ +GS+D ++R +D ++
Sbjct: 175 DLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF------QVVS 225
Query: 180 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 217
EG V V ++PD ++ S +D L + W+ E+
Sbjct: 226 CIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 152 (58.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKVEQGPRTTNYPAGLFFQH-------AGHRDKVVDFHWN 252
+WD GK + + P T P + H +G D+ + F W+
Sbjct: 173 LWDLT-AGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 62/262 (23%), Positives = 117/262 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAG 56
++ + H N + + + +GG D V LWSI + I S T P +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 115
+ +I + G+ + D + GH+ + + F P EF + G D+
Sbjct: 73 TPEELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTN 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LWD R V + + H + C+ ++P D + + + D++V+++D LT+ G
Sbjct: 129 IKLWDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---G 179
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVE--QGP-RTTN 230
+++F GH+ V V++ P++ + S + D + WD EK V +E GP R+
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL 238
Query: 231 Y-PAGLFFQHAGHRDKVVDFHW 251
+ P G ++G +D + + W
Sbjct: 239 FNPDGCCL-YSGCQDSLRVYGW 259
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 51/219 (23%), Positives = 91/219 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAKSAGSS--G 59
LTGH E P E +++G + S+ +W ++ + + A S G
Sbjct: 59 LTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
+ + D N K D G Y GH V + F P + S DD + LW
Sbjct: 118 EFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAADDHTVKLW 174
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G ++ H ++ V+++P ++ L+ +GS+D ++R +D ++
Sbjct: 175 DLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF------QVVS 225
Query: 180 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 217
EG V V ++PD ++ S +D L + W+ E+
Sbjct: 226 CIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 152 (58.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKVEQGPRTTNYPAGLFFQH-------AGHRDKVVDFHWN 252
+WD GK + + P T P + H +G D+ + F W+
Sbjct: 173 LWDLT-AGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRF-WD 217
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 62/262 (23%), Positives = 117/262 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAG 56
++ + H N + + + +GG D V LWSI + I S T P +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 115
+ +I + G+ + D + GH+ + + F P EF + G D+
Sbjct: 73 TPEELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTN 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LWD R V + + H + C+ ++P D + + + D++V+++D LT+ G
Sbjct: 129 IKLWDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---G 179
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVE--QGP-RTTN 230
+++F GH+ V V++ P++ + S + D + WD EK V +E GP R+
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSIL 238
Query: 231 Y-PAGLFFQHAGHRDKVVDFHW 251
+ P G ++G +D + + W
Sbjct: 239 FNPDGCCL-YSGCQDSLRVYGW 259
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 153 (58.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 36/141 (25%), Positives = 75/141 (53%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD-ARVGTSPVIKVEKAHDADLHCVDW 144
+Y H++ + ++F P+ ++ F S DD L +WD R V++ H AD+ CV W
Sbjct: 224 MYQAHKEAIRGISFSPTDSK-FVSGSDDGTLRIWDFMRCQEERVLR---GHGADVKCVHW 279
Query: 145 NPLDDNLILTGSADNS--VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
+P +I++GS DN ++++D ++ G + H + V+ ++W+ D +
Sbjct: 280 HP-QKGMIVSGSKDNQQPIKIWDPKS------GIALATLHAHKSTVMDLKWN-DNGNWLV 331
Query: 203 SSAEDGLLNIWDYEKVGKKVE 223
+++ D LL ++D + ++V+
Sbjct: 332 TASRDHLLKLFDIRNLREEVQ 352
Score = 125 (49.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 38/141 (26%), Positives = 60/141 (42%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDW 144
+ GH V+ V + P D+ I +WD + G + + AH + + + W
Sbjct: 266 VLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIA--LATLHAHKSTVMDLKW 323
Query: 145 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
N + N ++T S D+ +++FD RNL + F GH V W P +F S
Sbjct: 324 ND-NGNWLVTASRDHLLKLFDIRNLREE-----VQVFRGHKKEASSVSWHPIHEGLFCSG 377
Query: 205 AEDGLLNIWDYEKVGKKVEQG 225
DG + W+ VG E G
Sbjct: 378 GSDGSILFWN---VGTDKEIG 395
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK-VEKAHDADLHCVDW 144
++ GH+ V++ P FCS G D ++ W+ VGT I VE AHD+ + + W
Sbjct: 353 VFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN--VGTDKEIGCVETAHDSIVWTLAW 410
Query: 145 NPLDDNLILTGSADNSVRMFDR 166
+PL +++ +GS D++++ + R
Sbjct: 411 HPLG-HILCSGSNDHTIKFWTR 431
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 149 (57.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH++ + V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHKEAISSVLW--SDAEEICSASWDHTIKVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS 254
++ +WD R+ P + A H DKV+ W S
Sbjct: 365 NMVKLWD-----------TRSCKAP---LYDLAAHEDKVLSVDWTDS 397
Score = 107 (42.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 149
H V V + P+ Q+ S D+ + LWD R +P+ + AH+ + VDW D
Sbjct: 341 HTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DS 397
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVGS 176
L+L+G ADN + + R + T++ VG+
Sbjct: 398 GLLLSGGADNKLYSY-RYSPTTSHVGA 423
Score = 107 (42.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/114 (23%), Positives = 52/114 (45%)
Query: 97 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KAHDADLHCVDWNPLDDNLILTG 155
+++ P + S D + LWD R ++ + +H + V W+P + +++G
Sbjct: 303 ISYSPL-CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISG 361
Query: 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 209
S DN V+++D R+ + P+ H VL V W+ D + A++ L
Sbjct: 362 SLDNMVKLWDTRSCKA-----PLYDLAAHEDKVLSVDWT-DSGLLLSGGADNKL 409
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 15 LAMCPTEPYVLSGGKDK-SVVLWSIQDHITSSATDPATAKSAGSSGSI 61
L + T LSG K+ S VLWS + I S++ D SGS+
Sbjct: 243 LGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSL 290
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 149 (57.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 89 GHEDTVEDVTFCPSSAQEFC-SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
GHE + DV + PS +F S D LWDA T + +++ HD + + +
Sbjct: 263 GHERRISDVKYHPSG--KFIGSASHDMTWRLWDA--STHQELLLQEGHDKGVFSLSFQ-C 317
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +L+ +G D+ ++D R+ GS + GHS + V WSP+ V + D
Sbjct: 318 DGSLVCSGGMDSLSMLWDIRS------GSKVMTLAGHSKPIYTVAWSPNGYQV-ATGGGD 370
Query: 208 GLLNIWDYEK 217
G++N+WD K
Sbjct: 371 GIINVWDIRK 380
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
+Y GH V D+ P S F S D LW T P +++ H D+ CV ++
Sbjct: 379 LYQGHAYPVWDLDISPCSLY-FASASHDRTARLWSFD-RTYP-LRIYAGHLLDVDCVKFH 435
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
P + N + TGS D +VR++ + G+ + F GH VL + +SP+ S+
Sbjct: 436 P-NSNYLATGSTDKTVRLWSTQQ------GNSVRLFTGHRGPVLALAFSPN-GKYLASAG 487
Query: 206 EDGLLNIWD 214
ED L +WD
Sbjct: 488 EDQRLKLWD 496
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
++ GH V + F P+ + S G+D L LWD GT + K + H ++ + ++
Sbjct: 463 LFTGHRGPVLALAFSPNG-KYLASAGEDQRLKLWDLASGT--LYKELRGHTDNITSLTFS 519
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSN 172
P D +LI + S DNSVR++D RN N
Sbjct: 520 P-DSSLIASASMDNSVRVWDIRNTYCN 545
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 127 (49.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
++ GH V ++F P+ + S G+D L LWD GT + K + H + + ++
Sbjct: 17 LFTGHRGPVLSLSFSPNG-KYLASAGEDQRLKLWDLASGT--LFKELRGHTDSITSLAFS 73
Query: 146 PLDDNLILTGSADNSVRMFDRR----NLTSNGV-GSPINKFEGHSAAVLCVQW 193
P D LI + S DNSVR++D R N ++G G + + G + VL VQ+
Sbjct: 74 P-DSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQF 125
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 150 (57.9 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 41/129 (31%), Positives = 62/129 (48%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
+Y GH V D+ P S F S D LW T P +++ H AD+ CV ++
Sbjct: 379 LYQGHAYPVWDLDISPYSLY-FASGSHDRTARLWSFD-RTYP-LRIYAGHLADVDCVKFH 435
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
P + N + TGS D +VR++ + G+ + F GH VL + +SP+ S+
Sbjct: 436 P-NSNYLATGSTDKTVRLWSAQQ------GNSVRLFTGHRGPVLSLAFSPN-GKYLASAG 487
Query: 206 EDGLLNIWD 214
ED L +WD
Sbjct: 488 EDQRLKLWD 496
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 53/189 (28%), Positives = 80/189 (42%)
Query: 15 LAMCPTEPYVLSGGKDKSVVLWSIQDHI-----TSSATDPATAKSAGSSGSIIKQSPKPG 69
L + P Y SG D++ LWS D K +S + S
Sbjct: 390 LDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 129
A G SV ++ GH V + F P+ + S G+D L LWD GT +
Sbjct: 450 VRLWSAQQGNSVR---LFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLASGT--LY 503
Query: 130 KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL----TSNGVGSP-INKFEGH 184
K + H ++ + ++P D LI + S DNSVR++D RN ++G S + + G
Sbjct: 504 KELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQ 562
Query: 185 SAAVLCVQW 193
+ VL VQ+
Sbjct: 563 MSNVLSVQF 571
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 146 (56.5 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH++ + D+ + S + CS DD + +WD G ++K K H + V +NP
Sbjct: 86 GHKEGISDIAWSQDS-KLICSASDDKTIKIWDVESGK--MVKTLKGHKEYVFGVSFNP-Q 141
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
NLI++GS D +VR++D G HS V V ++ D + V S + DG
Sbjct: 142 SNLIVSGSFDENVRIWDVNT------GECTKMISAHSDPVTGVHFNRDGTLVV-SGSYDG 194
Query: 209 LLNIWD 214
+ IWD
Sbjct: 195 TVRIWD 200
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 52/226 (23%), Positives = 95/226 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAG 56
++ L GH++ F ++ P ++SG D++V +W + + S+ +DP T
Sbjct: 123 VKTLKGHKEYV-FGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN 181
Query: 57 SSGSIIKQSPKPGDGNDKAAD---GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD- 112
G+++ DG + D G + +G E V V F P+ +F G
Sbjct: 182 RDGTLVVSGSY--DGTVRIWDTTTGQLLNTISTEDGKE--VSFVKFSPNG--KFVLAGTL 235
Query: 113 DSCLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLT 170
D+ L LW +K H + +C+ ++ I+TGS DN + ++ NL
Sbjct: 236 DNTLRLWSYN-NNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY---NLQ 291
Query: 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIWDY 215
+ + + GH VL V P ++ + + E D + IW +
Sbjct: 292 TREI---VQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIWKH 334
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 138 (53.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH + + V + S A E CS D + +WD G +K + +C+ ++PL
Sbjct: 254 SGHTEAISSVLW--SDADEVCSASWDHTVRVWDVESGG---LKSTLTGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHDQQLISGSLD 364
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251
++ +WD R+ P + A H DKV+ W
Sbjct: 365 NMVKLWD-----------TRSCKAP---LYDLAAHEDKVLSVDW 394
Score = 111 (44.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/134 (23%), Positives = 59/134 (44%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KAH 135
D S G + G++ +++ P + S D + LWD R ++ + +H
Sbjct: 284 DVESGGLKSTLTGNK-VFNCISYSPL-CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSH 341
Query: 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP 195
+ V W+P D +++GS DN V+++D R+ + P+ H VL V W+
Sbjct: 342 TGWVTSVKWSPTHDQQLISGSLDNMVKLWDTRSCKA-----PLYDLAAHEDKVLSVDWT- 395
Query: 196 DKSSVFGSSAEDGL 209
D + A++ L
Sbjct: 396 DTGLLLSGGADNKL 409
Score = 105 (42.0 bits), Expect = 0.00067, Sum P(2) = 0.00066
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 149
H V V + P+ Q+ S D+ + LWD R +P+ + AH+ + VDW D
Sbjct: 341 HTGWVTSVKWSPTHDQQLISGSLDNMVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DT 397
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVGS 176
L+L+G ADN + + R + T++ VG+
Sbjct: 398 GLLLSGGADNKLYSY-RYSPTTSHVGA 423
Score = 49 (22.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 21 EPYVLSGGKDKSVVLWSIQ 39
E ++LSG DK+ +WS++
Sbjct: 111 EEWILSGSYDKTSRIWSLE 129
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH + V V + A E CS D + LWDA G K + +C+ ++PL
Sbjct: 253 SGHNEAVSSVLWM--DADELCSASWDHTIRLWDAETGGQ---KSTLSGSKVFNCISYSPL 307
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D VR++D R+ + V + H+ V V+W+P S + D
Sbjct: 308 CRRLA-SGSTDRHVRLWDPRSKDGSLV---LLSLTSHNGWVTAVRWAPSHEHQLVSGSLD 363
Query: 208 GLLNIWD 214
++ +WD
Sbjct: 364 NVVKLWD 370
Score = 105 (42.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 29/134 (21%), Positives = 60/134 (44%)
Query: 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KAH 135
D + G + +G + +++ P + S D + LWD R ++ + +H
Sbjct: 283 DAETGGQKSTLSGSK-VFNCISYSPL-CRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSH 340
Query: 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP 195
+ + V W P ++ +++GS DN V+++D R+ + P+ H VLC W+
Sbjct: 341 NGWVTAVRWAPSHEHQLVSGSLDNVVKLWDTRSCKA-----PLYDLAAHEDKVLCADWT- 394
Query: 196 DKSSVFGSSAEDGL 209
+ + A++ L
Sbjct: 395 ENGLILSGGADNKL 408
Score = 50 (22.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWS 37
GH + + +A+ PT SG DK + +WS
Sbjct: 187 GHAGSVD-TIAVDPTRTKFCSGSWDKMLKIWS 217
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 59/234 (25%), Positives = 99/234 (42%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW----SIQDH--------ITSSATDPA 50
IL GH ++L P + ++S +D +++W S + H + + A P+
Sbjct: 60 ILQGHTGKV-YSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPS 118
Query: 51 TAKSA-GSSGSIIK----QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQ 105
A G S+ SP DGN + + +GH+ V + P
Sbjct: 119 GQSVACGGLDSVCSIFNLNSPIDKDGNHPVSR--------MLSGHKGYVSSCQYVPDEDT 170
Query: 106 EFC-SVGDDSCLILWDARVGTSPVI---KVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161
S GD +C +LWD G + + + H AD+ V + + L ++GS D +
Sbjct: 171 HLITSSGDQTC-VLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTA 229
Query: 162 RMFDRRNLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
R++D R V S + F GH V V++ PD + FG+ +EDG ++D
Sbjct: 230 RLWDTR------VASRAQRTFYGHEGDVNTVKFFPDGNR-FGTGSEDGTCRLFD 276
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 25 LSGGKDKSVVLWSIQDHITSSATDPATAK--SAGSSGSIIKQSPKPGDGNDKAADGPSVG 82
L+GG DK+VVL+ + K + I D + +
Sbjct: 225 LTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSS 284
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHC 141
+ I + H+ V D++ +S S DDS D R G S + VE +H
Sbjct: 285 SKAIIDVHQAPVTDISL-NASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHS 343
Query: 142 VDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200
++++P D LI TG+AD V+++D +N T V + F GH+AAV + +S +
Sbjct: 344 IEFHP--DGLIFGTGAADAVVKIWDLKNQT---VAAA---FPGHTAAVRSIAFS-ENGYY 394
Query: 201 FGSSAEDGLLNIWDYEKV 218
+ +EDG + +WD K+
Sbjct: 395 LATGSEDGEVKLWDLRKL 412
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 142 (55.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH++ + V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHKEAISSVLW--SDAEEICSASWDHTIGVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 208 GLLNIWD 214
++ +WD
Sbjct: 365 NIVKLWD 371
Score = 102 (41.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 28/120 (23%), Positives = 53/120 (44%)
Query: 97 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KAHDADLHCVDWNPLDDNLILTG 155
+++ P + S D + LWD R ++ + +H + V W+P + +++G
Sbjct: 303 ISYSPL-CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISG 361
Query: 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215
S DN V+++D R+ + P+ H VL V W+ + + S D L + Y
Sbjct: 362 SLDNIVKLWDTRSCKA-----PLYDLAAHEDKVLSVDWT--NTGLLLSGGADNKLYSYRY 414
Score = 51 (23.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 15 LAMCPTEPYVLSGGKDK-SVVLWSIQDHITSSATDPATAKSAGSSGSI 61
L + T LSG K+ S VLWS + I S++ D SGS+
Sbjct: 243 LGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIGVWDVESGSL 290
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 21 EPYVLSGGKDKSVVLWS 37
E ++L+G DK+ +WS
Sbjct: 111 EEWILTGSYDKTSRIWS 127
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 57/233 (24%), Positives = 97/233 (41%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS 60
++IL GH + + P Y+LS +D +V LWS+Q + S
Sbjct: 536 LKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 61 IIKQSPKPGDGNDKAAD---GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCL 116
G G+D+ A P I+ GH V F P+S + + G D +
Sbjct: 595 PYGYYFVSG-GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS--NYVATGSADRTV 651
Query: 117 ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 176
LWD G +++ H +H + ++P + + TG+ D V ++D G G
Sbjct: 652 RLWDVLNGNC--VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDI------GHGL 702
Query: 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT 229
+ + +GH+ V +++S D + S + D + +WD K + VE TT
Sbjct: 703 MVGELKGHTDTVCSLRFSRD-GEILASGSMDNTVRLWDAVKAFEDVETDDFTT 754
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 19 PTEPYVLSGGKDKSVVLWSI--QDHITS---SATDPA-TAKSAGSSGSIIKQSPKPGDGN 72
PTEP++L+ D +V +W+ Q+ + S S +P TA+ I+ S D
Sbjct: 25 PTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGSD---DTY 81
Query: 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE 132
+ + ++ + H D + + P+ S DD + LWD G S +V
Sbjct: 82 IRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPY-ILSSSDDMFIKLWDYEKGWSNT-QVF 139
Query: 133 KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF--EGHSAAVLC 190
+ H + + WNP D N T S D +V+++ + SP F EGH +
Sbjct: 140 EGHSHYVMSIAWNPKDTNQFATASLDKTVKVWS--------INSPHPHFTLEGHEKGINS 191
Query: 191 VQW-SPDKSSVFGSSAEDGLLNIWDYE 216
V++ S + S A+D L+ IWDY+
Sbjct: 192 VEYFSGGEKPYLISGADDKLVKIWDYQ 218
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 56/217 (25%), Positives = 95/217 (43%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWS----IQDHITSSATDPATAKSAGSS 58
+L GH D+ ++ + SG D++V +W + H D A S
Sbjct: 342 MLKGHNDSVR-SVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD 400
Query: 59 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 118
+ S G GN K D + + + GH+D V V+F P S + S DD + +
Sbjct: 401 SRRLA-SASDG-GNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS-RLLASASDDRTVKI 457
Query: 119 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178
W A G+ + + + H+ + V ++ D LI + S D +V+++D + P+
Sbjct: 458 WHAATGS--LQRTLEGHNDWVRSVVFSH-DSRLIASASDDMTVKIWDTATV-------PL 507
Query: 179 -NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
N E H V V +S D S + S+++D + IWD
Sbjct: 508 QNNLESHDNWVRSVVFSHD-SRLLASASDDMTVKIWD 543
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
GDG K D + + GH + V+ V F S + S DD + +WD GT +
Sbjct: 283 GDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS-RLLASASDDGTVKIWDTATGT--L 339
Query: 129 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAV 188
++ K H+ + V ++ D LI +GS D +VR+++ T+ G+ + FE H +V
Sbjct: 340 QRMLKGHNDSVRSVVFSH-DSRLIASGSNDRTVRIWE----TTTGLLR--HTFEDHEDSV 392
Query: 189 LCVQWSPDKSSVFGSSAEDGLLNIWD 214
+ V ++ D S S+++ G + IWD
Sbjct: 393 MAVSFAHD-SRRLASASDGGNVKIWD 417
Score = 129 (50.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 50/219 (22%), Positives = 93/219 (42%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-----SIQDHITSSATDPATAKSAGS 57
+L GH D +++ P + S D++V +W S+Q + + +
Sbjct: 426 VLEGHDDCVN-SVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHD 484
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
S I S D K D +V + H++ V V F S + S DD +
Sbjct: 485 SRLIASASD---DMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDS-RLLASASDDMTVK 540
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+WD G+ + + HD ++ V ++P D L+ + S D +V+++ G+
Sbjct: 541 IWDTATGS--LENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIWYA------ATGTV 591
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ F+G + + +S S++ S+ +DG + IWD E
Sbjct: 592 QHTFDGSGRVAISLAFS-HTSNLLASAMDDGTVKIWDME 629
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWN 145
Y HE V F + S G D C + +W R S VI ++ A++ CV +N
Sbjct: 459 YEEHEKRAWSVDFSRTEPSMLVS-GSDDCKVKVWCTRQEAS-VINIDMK--ANICCVKYN 514
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
P N I GSAD+ + +D RN++ P++ F GH AV V++ + S++
Sbjct: 515 PGSSNYIAVGSADHHIHYYDLRNISQ-----PLHVFSGHKKAVSYVKFLSNNE--LASAS 567
Query: 206 EDGLLNIWD 214
D L +WD
Sbjct: 568 TDSTLRLWD 576
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 144 (55.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 42/164 (25%), Positives = 74/164 (45%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH++ + V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHKEAISSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R T +G ++ H+ V ++WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSLKWSPTHEQQLISGSLD 364
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251
++ +WD R+ P + A H DKV+ W
Sbjct: 365 NIVKLWD-----------TRSCKAP---LYDLAAHEDKVLSVDW 394
Score = 103 (41.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 149
H V + + P+ Q+ S D+ + LWD R +P+ + AH+ + VDW D
Sbjct: 341 HTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DT 397
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVGS 176
L+L+G ADN + + R + T++ VG+
Sbjct: 398 GLLLSGGADNKLYSY-RYSPTTSHVGA 423
Score = 50 (22.7 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 15 LAMCPTEPYVLSGGKDK-SVVLWSIQDHITSSATDPATAKSAGSSGSI 61
L + T LSG K+ S VLWS + I S++ D SGS+
Sbjct: 243 LGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIRVWDVESGSL 290
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 144 (55.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 149
H D V D+TF P + S D L +WD + ++KV + H ++C ++P D
Sbjct: 170 HTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLK-DDGNMVKVLRGHQNWVYCSAFSP-DS 227
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 209
+++ + A +V ++D T I K EGH V+C ++SPD ++ +++ D
Sbjct: 228 SVLCSVGAGKAVFLWDMDKYTL------IRKLEGHHNDVVCCEFSPD-GALLATASYDTR 280
Query: 210 LNIWD 214
+ +WD
Sbjct: 281 VIVWD 285
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 143 (55.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 57/237 (24%), Positives = 100/237 (42%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW----SIQDH--------ITSSATDP-A 50
L GH ++L P ++S +D +++W S + H + + A P
Sbjct: 61 LQGHTGKV-YSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 51 TAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSS-AQEFCS 109
+ + G S+ DK DG +V + GH V + P+ A S
Sbjct: 120 QSVACGGLDSVCSIFSLSSTA-DK--DG-TVPVSRMLTGHRGYVSCCQYVPNEDAHLITS 175
Query: 110 VGDDSCLILWDARVGTSPVI---KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166
GD +C ILWD G + + + H AD+ V + + N ++GS D++ R++D
Sbjct: 176 SGDQTC-ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDT 234
Query: 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
R + F GH V V++ PD FG+ ++DG ++D + G +++
Sbjct: 235 R-----AASRAVRTFHGHEGDVNTVKFFPDGYR-FGTGSDDGTCRLYDI-RTGHQLQ 284
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH T+ F P ++ + D+ +WD T P+ + K H + CV W+P D
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQT-PMHTL-KGHYNWVLCVSWSP-D 197
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP------DKSSVFG 202
+I TGS DN++R++D ++ +G + GHS + + W P
Sbjct: 198 GEVIATGSMDNTIRLWDPKS--GQCLGDALR---GHSKWITSLSWEPIHLVKPGSKPRLA 252
Query: 203 SSAEDGLLNIWD 214
SS++DG + IWD
Sbjct: 253 SSSKDGTIKIWD 264
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 102 SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161
+S + + DD + LW+ T P+ ++ H ++ V ++P D I++ S DNS+
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMT-GHQKLVNHVAFSP-DGRYIVSASFDNSI 426
Query: 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
+++D R+ G I+ F GH A+V V WS D + S ++D L +WD
Sbjct: 427 KLWDGRD------GKFISTFRGHVASVYQVAWSSD-CRLLVSCSKDTTLKVWD 472
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL 139
S P GH+ V V F P + S D+ + LWD R G I + H A +
Sbjct: 391 STKPIARMTGHQKLVNHVAFSPDG-RYIVSASFDNSIKLWDGRDGK--FISTFRGHVASV 447
Query: 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 199
+ V W+ D L+++ S D +++++D R + V P GH V V WS D
Sbjct: 448 YQVAWSS-DCRLLVSCSKDTTLKVWDVRTRKLS-VDLP-----GHKDEVYTVDWSVDGKR 500
Query: 200 VFGSSAEDGLLNIWDY 215
V S +D ++ +W +
Sbjct: 501 VC-SGGKDKMVRLWTH 515
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 112 DDSCLILWDARV--GTSPVIKVEKA---HDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166
+D +L+ R PV + A H + + C + P + ++TG+ DN+ R++D
Sbjct: 114 EDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDC 173
Query: 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
T P++ +GH VLCV WSPD V + + D + +WD
Sbjct: 174 DTQT------PMHTLKGHYNWVLCVSWSPD-GEVIATGSMDNTIRLWD 214
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 142 (55.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH+ V D+ + S ++ S DD L +++ + TS + K K H+ + C ++NP
Sbjct: 127 GHKLGVNDIAWS-SDSRCVVSASDDKTLKIFE--IVTSRMTKTLKGHNNYVFCCNFNP-Q 182
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
+L+++GS D SVR++D + G I HS V V ++ D S+ S + DG
Sbjct: 183 SSLVVSGSFDESVRIWDVKT------GMCIKTLPAHSDPVSAVSFNRD-GSLIASGSYDG 235
Query: 209 LLNIWD 214
L+ IWD
Sbjct: 236 LVRIWD 241
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 56/218 (25%), Positives = 95/218 (43%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSA-TDPATAKSAGSSG 59
L GH +N F P V+SG D+SV +W ++ + T A +DP +A S G
Sbjct: 167 LKGH-NNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG 225
Query: 60 SIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 118
S+I G A+G + + + + V V F P+ S DS L L
Sbjct: 226 SLIASGSYDGLVRIWDTANGQCI--KTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKL 282
Query: 119 WDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 176
WD G + +K H+ +C+ +++ I++GS D + ++ NL + +
Sbjct: 283 WDFSKGKT--LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW---NLQTREI-- 335
Query: 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ EGH+ VL P ++ + + E D ++IW
Sbjct: 336 -VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 38 (18.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 44 SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89
S+ T A A +SGS + +G+ K+ P G Y G
Sbjct: 58 SAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLG 103
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 142 (55.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH+ V D+ + S ++ S DD L +++ + TS + K K H+ + C ++NP
Sbjct: 127 GHKLGVNDIAWS-SDSRCVVSASDDKTLKIFE--IVTSRMTKTLKGHNNYVFCCNFNP-Q 182
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
+L+++GS D SVR++D + G I HS V V ++ D S+ S + DG
Sbjct: 183 SSLVVSGSFDESVRIWDVKT------GMCIKTLPAHSDPVSAVSFNRD-GSLIASGSYDG 235
Query: 209 LLNIWD 214
L+ IWD
Sbjct: 236 LVRIWD 241
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 56/218 (25%), Positives = 95/218 (43%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSA-TDPATAKSAGSSG 59
L GH +N F P V+SG D+SV +W ++ + T A +DP +A S G
Sbjct: 167 LKGH-NNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG 225
Query: 60 SIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 118
S+I G A+G + + + + V V F P+ S DS L L
Sbjct: 226 SLIASGSYDGLVRIWDTANGQCI--KTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKL 282
Query: 119 WDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 176
WD G + +K H+ +C+ +++ I++GS D + ++ NL + +
Sbjct: 283 WDFSKGKT--LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW---NLQTREI-- 335
Query: 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 213
+ EGH+ VL P ++ + + E D ++IW
Sbjct: 336 -VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 38 (18.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 44 SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89
S+ T A A +SGS + +G+ K+ P G Y G
Sbjct: 58 SAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLG 103
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 365 PLARMTGHQALINQVVFSPDS-RVIASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 421
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 422 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLSTDL---PGHADEVYAVDWSPDGQRV-A 473
Query: 203 SSAEDGLLNIW 213
S +D L IW
Sbjct: 474 SGGKDKCLRIW 484
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
+ S DD L LW P+ ++ H A ++ V ++P D +I + S D S++++
Sbjct: 343 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVVFSP-DSRVIASASFDKSIKLW 400
Query: 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 401 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 443
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 56/225 (24%), Positives = 95/225 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ----DHITSSATDPATAKSAG 56
++ L GH+ A +++ + S D++V +W + H +D +
Sbjct: 289 LQALEGHEA-AVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCL 116
++ + D K D + + GH D V V F S Q S DDS +
Sbjct: 348 HDSRLLASA---SDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS-QLLASASDDSTV 403
Query: 117 ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 176
+WD GT + + H + V ++ D L+ + S D++V+++D G GS
Sbjct: 404 KIWDT--GTGSLQHTLEGHRDWVRSVIFSH-DSQLLASASDDSTVKIWD------TGTGS 454
Query: 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
+ EGH V V +S D S + S+++D + IWD EK K
Sbjct: 455 LQHTLEGHRDWVRSVIFSHD-SRLLASASDDRTVRIWDTEKGSHK 498
Score = 141 (54.7 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 57/218 (26%), Positives = 89/218 (40%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-----SIQDHITSSATDPATAKSAGSS 58
L GH D + + +L+ D +V +W S+Q H D +
Sbjct: 334 LEGHSDLVRSVIFSHDSR--LLASASDSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHD 390
Query: 59 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 118
++ + D K D + + GH D V V F S Q S DDS + +
Sbjct: 391 SQLLASASD--DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS-QLLASASDDSTVKI 447
Query: 119 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178
WD GT + + H + V ++ D L+ + S D +VR++D GS
Sbjct: 448 WDT--GTGSLQHTLEGHRDWVRSVIFSH-DSRLLASASDDRTVRIWDTEK------GSHK 498
Query: 179 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGHS+ V V +S D S + S++ D + IWD E
Sbjct: 499 HTLEGHSSLVTSVSFSHD-SRLLASASNDQTVRIWDIE 535
>CGD|CAL0005315 [details] [associations]
symbol:YTM1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0070545 "PeBoW complex"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005315 GO:GO:0005654
GO:GO:0071216 GO:GO:0036180 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009267 EMBL:AACQ01000001 EMBL:AACQ01000002
GO:GO:0036170 GO:GO:0006364 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HAMAP:MF_03029 RefSeq:XP_723311.1 RefSeq:XP_723501.1
ProteinModelPortal:Q5APF0 STRING:Q5APF0 GeneID:3634765
GeneID:3634970 KEGG:cal:CaO19.12278 KEGG:cal:CaO19.4815
Uniprot:Q5APF0
Length = 466
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 53/214 (24%), Positives = 90/214 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS 60
+ +L GH+ LA+ +LS G D+++ WS +S + SS S
Sbjct: 214 LALLEGHKAPV-VDLAVDTQTNRILSAGYDQNIGFWSTNYKEMTSIQPLEYDSNVVSSSS 272
Query: 61 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 120
++ D + P + GH + VE V F + SV D + WD
Sbjct: 273 KKRRKMAVQDATIRRR-----APLSLLQGHSEPVEGVIFDAKDSTVGYSVSQDHTIKTWD 327
Query: 121 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 180
+ TS + + L + + NLI +GS+ + + D R T++ I+K
Sbjct: 328 --LVTSRCVDTRTTGYSLLSVLQLPQV--NLIASGSSARHINLHDPRVTTTSD--QTISK 381
Query: 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
GH+ V+ + SP ++F SS+ DG + +WD
Sbjct: 382 LVGHTNFVVGLTASPHNQNMFASSSHDGTVKVWD 415
>UNIPROTKB|Q5APF0 [details] [associations]
symbol:YTM1 "Ribosome biogenesis protein YTM1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005315 GO:GO:0005654 GO:GO:0071216 GO:GO:0036180
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009267
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0036170 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
RefSeq:XP_723311.1 RefSeq:XP_723501.1 ProteinModelPortal:Q5APF0
STRING:Q5APF0 GeneID:3634765 GeneID:3634970 KEGG:cal:CaO19.12278
KEGG:cal:CaO19.4815 Uniprot:Q5APF0
Length = 466
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 53/214 (24%), Positives = 90/214 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS 60
+ +L GH+ LA+ +LS G D+++ WS +S + SS S
Sbjct: 214 LALLEGHKAPV-VDLAVDTQTNRILSAGYDQNIGFWSTNYKEMTSIQPLEYDSNVVSSSS 272
Query: 61 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 120
++ D + P + GH + VE V F + SV D + WD
Sbjct: 273 KKRRKMAVQDATIRRR-----APLSLLQGHSEPVEGVIFDAKDSTVGYSVSQDHTIKTWD 327
Query: 121 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 180
+ TS + + L + + NLI +GS+ + + D R T++ I+K
Sbjct: 328 --LVTSRCVDTRTTGYSLLSVLQLPQV--NLIASGSSARHINLHDPRVTTTSD--QTISK 381
Query: 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
GH+ V+ + SP ++F SS+ DG + +WD
Sbjct: 382 LVGHTNFVVGLTASPHNQNMFASSSHDGTVKVWD 415
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 142 (55.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH + + V + S A+E CS D + +WD G +K + +C+ ++PL
Sbjct: 254 SGHTEAISSVLW--SDAEEICSASWDHTIRVWDVESGG---LKSTLTGNKVFNCISYSPL 308
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251
++ +WD R+ P + A H DKV+ W
Sbjct: 365 NIVKLWD-----------TRSCKAP---LYDLAAHEDKVLSVDW 394
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 143 (55.4 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 224 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 280
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 281 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 337
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 338 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 386
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 387 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 422
>DICTYBASE|DDB_G0274279 [details] [associations]
symbol:tssc1 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0274279 GO:GO:0045335 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000151_GR EMBL:AAFI02000012 eggNOG:NOG314403
RefSeq:XP_643981.1 ProteinModelPortal:Q86A97 STRING:Q86A97
PRIDE:Q86A97 EnsemblProtists:DDB0234267 GeneID:8619407
KEGG:ddi:DDB_G0274279 OMA:RINESMD ProtClustDB:CLSZ2729203
Uniprot:Q86A97
Length = 400
Score = 136 (52.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 42/148 (28%), Positives = 68/148 (45%)
Query: 30 DKSVVLWS-IQDHITSSATDP---ATAKSAGS-SGSIIKQSPKPGDGNDKAADGPSVGPR 84
D ++ LWS I D + + S GS + +I Q D N K D +
Sbjct: 162 DSNIRLWSKIDDQNEPTVIKQFGNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKET 221
Query: 85 -GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 143
+ H + + D+ F P+ S GDD L +WD R PV K+ H+ +
Sbjct: 222 FSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDPV-KIFSGHNHWIWSAK 280
Query: 144 WNPLDDNLILTGSADNSVRMFDRRNLTS 171
+N D LI+T S+DN+V++++ +L+S
Sbjct: 281 FNRYHDQLIITSSSDNTVKLWNLYSLSS 308
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
I +E H +V + WS + +F S + DG
Sbjct: 353 IKTYEEHEDSVYNISWS-SSNFLFASLSYDG 382
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 315 PLARMTGHQALINQVLFSPDS-RIIASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 371
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 372 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLAADL---PGHADEVYAVDWSPDGQRV-A 423
Query: 203 SSAEDGLLNIW 213
S +D L IW
Sbjct: 424 SGGKDKCLRIW 434
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
+ S DD L +W P+ ++ H A ++ V ++P D +I + S D S++++
Sbjct: 293 ERLVSGSDDFTLFMWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIIASASFDKSIKLW 350
Query: 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 351 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 393
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 241 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 298 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 354
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 355 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 403
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 404 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 439
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 241 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 298 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 354
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 355 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 403
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 404 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 439
>ZFIN|ZDB-GENE-041010-167 [details] [associations]
symbol:tssc1 "tumor suppressing subtransferable
candidate 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-041010-167 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314403
HOGENOM:HOG000264967 EMBL:BC083257 IPI:IPI00507270
RefSeq:NP_001006065.1 UniGene:Dr.108122 ProteinModelPortal:Q5XJP1
PRIDE:Q5XJP1 GeneID:450045 KEGG:dre:450045 CTD:7260
HOVERGEN:HBG052937 InParanoid:Q5XJP1 OrthoDB:EOG4C5CJP
NextBio:20833026 ArrayExpress:Q5XJP1 Uniprot:Q5XJP1
Length = 387
Score = 124 (48.7 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 57/195 (29%), Positives = 88/195 (45%)
Query: 1 MEILTGHQDNAEFALAMCPT-EPY-----VLSGGKDKSVVLWSIQDH-----ITSSATDP 49
+E+L H DN+ C EP V+S ++ V+LW +Q+ I+SSAT
Sbjct: 123 LELLC-HLDNSAHGSMACVLWEPMGDGKRVISLAENH-VLLWDLQESSAKATISSSATLE 180
Query: 50 ATAKSAGSSGSIIKQSP-----KPGDGNDKAADGPSVGPRG-IY---NGHEDTVEDVTFC 100
+ ++G K SP + ND A G + IY N H V D+ F
Sbjct: 181 GKGQLKFTAG---KWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFN 237
Query: 101 PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160
P+ S GDD + WD R + PV +E+ H + V +N D L+LT S+D+
Sbjct: 238 PNKQYYLASCGDDCKVKFWDVRHISEPVKCLEE-HSHWVWSVRYNHSHDQLLLTASSDSR 296
Query: 161 VRMFDRRNLTSNGVG 175
V + + +++S G
Sbjct: 297 VILSNMVSISSEPFG 311
Score = 57 (25.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI 212
S I+ +E H +V V+WS +F S + DG L I
Sbjct: 338 SIISTYEEHEDSVYAVEWSAADPWLFASLSYDGRLVI 374
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 258 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 314
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 315 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 371
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 372 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 420
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 421 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 456
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 260 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 316
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 317 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 373
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 374 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 422
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 423 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 458
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 261 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 317
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 318 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 374
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 375 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 423
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 424 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 459
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 273 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 330 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 386
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 387 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 435
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 436 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 471
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 273 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 330 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 386
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 387 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 435
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 436 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 471
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 273 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 330 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 386
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 387 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 435
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 436 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 471
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 142 (55.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 364 PLARMTGHQALINQVLFSPDS-RIIASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 420
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 421 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLAADL---PGHADEVYAVDWSPDGQRV-A 472
Query: 203 SSAEDGLLNIW 213
S +D L IW
Sbjct: 473 SGGKDKCLRIW 483
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
+ S DD L LW P+ ++ H A ++ V ++P D +I + S D S++++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIIASASFDKSIKLW 399
Query: 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
GD + D + P GH V +++ P ++ S + ++LWD G V
Sbjct: 134 GDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG-KKLASGCKNGQILLWDPSTGKQ-V 191
Query: 129 IKVEKAHDADLHCVDWNPLDDN----LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH 184
+ H + + W PL N + + S D SVR++D T+ G I GH
Sbjct: 192 GRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD----TTAGRCERI--LTGH 245
Query: 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213
+ +V C++W D + S+++D + +W
Sbjct: 246 TQSVTCLRWGGD--GLLYSASQDRTIKVW 272
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 142 (55.0 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 366 PLARMTGHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 422
Query: 143 DWNPLDDNLILTGSADNSVRMFD--RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200
W+ D L+++GS+D++++++D + LT++ GH+ V V WSPD V
Sbjct: 423 AWSA-DSRLLVSGSSDSTLKVWDVKAQKLTTD--------LPGHADEVYAVDWSPDGQRV 473
Query: 201 FGSSAEDGLLNIW 213
S +D L IW
Sbjct: 474 -ASGGKDKCLRIW 485
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/148 (27%), Positives = 67/148 (45%)
Query: 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
+ S DD L LW P+ ++ H A ++ V ++P D ++ + S D S++++
Sbjct: 344 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 401
Query: 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224
D R G + GH AAV + WS D S + S + D L +WD + +K+
Sbjct: 402 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWDVK--AQKL-- 450
Query: 225 GPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
TT+ P GH D+V W+
Sbjct: 451 ---TTDLP--------GHADEVYAVDWS 467
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
GD + D + P GH V +++ P ++ S + ++LWD GT V
Sbjct: 136 GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG-KKLASGCKNGQILLWDPSTGTQ-V 193
Query: 129 IKVEKAHDADLHCVDWNPLDDN----LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH 184
+ H + + W PL N + + S D SVR++D T+ G I GH
Sbjct: 194 GRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD----TTAGRCERI--LTGH 247
Query: 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213
+ +V C++W D + S+++D + +W
Sbjct: 248 TQSVTCLRWGGD--GLLYSASQDRTIKVW 274
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 46/194 (23%), Positives = 95/194 (48%)
Query: 32 SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91
++ W +Q+ I + +++ ++ SSG ++ + N A P+ GH
Sbjct: 7 TITSWKLQE-IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMS--LTGHT 63
Query: 92 DTVEDVTFCPSSAQEFCSVGDDS-CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN 150
V + F +S++E G S L LWD + +++ H A + +D++P+ +
Sbjct: 64 SAVGCIQF--NSSEERVVAGSLSGSLRLWDLEA--AKILRTLMGHKASISSLDFHPMGEY 119
Query: 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210
L +GS D++++++D R G + +++GH+ AV C+ +SPD S+++D +
Sbjct: 120 LA-SGSVDSNIKLWDVRR---KGC---VFRYKGHTQAVRCLAFSPD-GKWLASASDDSTV 171
Query: 211 NIWDYEKVGKKVEQ 224
+WD GK + +
Sbjct: 172 KLWDLI-AGKMITE 184
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 57/217 (26%), Positives = 97/217 (44%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAKSAG--SSG 59
LTGH +A + +E V++G S+ LW ++ + + A+ S G
Sbjct: 59 LTGHT-SAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG 117
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
+ D N K D G Y GH V + F P + S DDS + LW
Sbjct: 118 EYLASGSV--DSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG-KWLASASDDSTVKLW 174
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G +I +H + ++ V ++P ++ L+ +GSAD +V+++D N +GS
Sbjct: 175 DLIAGK--MITEFTSHTSAVNVVQFHP-NEYLLASGSADRTVKLWDLEKF--NMIGSS-- 227
Query: 180 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
EG + V V ++PD S ++ S + L ++ +E
Sbjct: 228 --EGETGVVRSVLFNPDGSCLYSGS--ENTLRVYGWE 260
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLS-GGKDKSVVLWSI-QDHITSSATDPATAKSAGSS 58
++ + H N +L + + +L+ GG+D V +W++ + + S T +A
Sbjct: 13 LQEIVAHSSNVS-SLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQF 71
Query: 59 GSIIKQSPKPG-DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCL 116
S ++ G+ + D + GH+ ++ + F P E+ + G DS +
Sbjct: 72 NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG--EYLASGSVDSNI 129
Query: 117 ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 176
LWD R V + K H + C+ ++P D + + S D++V+++D L + G
Sbjct: 130 KLWDVR-RKGCVFRY-KGHTQAVRCLAFSP-DGKWLASASDDSTVKLWD---LIA---GK 180
Query: 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
I +F H++AV VQ+ P++ + SA D + +WD EK
Sbjct: 181 MITEFTSHTSAVNVVQFHPNEYLLASGSA-DRTVKLWDLEK 220
>UNIPROTKB|E1C370 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14305
CTD:348995 OMA:QWTAAHY GeneTree:ENSGT00390000004803
EMBL:AADN02025353 IPI:IPI00600408 RefSeq:XP_419667.2
UniGene:Gga.8247 ProteinModelPortal:E1C370
Ensembl:ENSGALT00000020225 GeneID:421628 KEGG:gga:421628
NextBio:20824366 Uniprot:E1C370
Length = 374
Score = 140 (54.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 51/179 (28%), Positives = 78/179 (43%)
Query: 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV-EKAHD-ADLHC 141
R I N T+ VTF ++ E +V L +WD R + ++ D LHC
Sbjct: 164 RTIDNADSSTLHAVTFLRTT--EILTVNSIGQLKIWDFRQQRNEPAQIFSLTGDRVPLHC 221
Query: 142 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 201
VD +P +++ TG D + ++D R T P++ H A + V + P
Sbjct: 222 VDRHPNQQHIVATGGQDGMLSIWDIRQGTM-----PVSLLNAHEAEMWEVHFHPSNPDHL 276
Query: 202 GSSAEDGLLNIWDYEK-VGKK---VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
+ +EDG L WD V +K + QG R+T Y F H+ VV W ++DP
Sbjct: 277 FTCSEDGSLWHWDTSTDVSEKPSFLHQGGRSTAY-----FSHSTINQSVVSA-WLSNDP 329
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 104 (41.7 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+++ I +GS D+ V ++ +R+ PI + GH+ V CV W+P S+ S+++D
Sbjct: 562 NEDFIASGSEDHKVYIWHKRSEL------PIAELTGHTRTVNCVSWNPQIPSMMASASDD 615
Query: 208 GLLNIW 213
G + IW
Sbjct: 616 GTVRIW 621
Score = 78 (32.5 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPL 147
GH V + + P + + G D C LW V T + K+ ++H+ L V WNP
Sbjct: 379 GHAYGVSYIAWSPDDSY-LVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP- 436
Query: 148 DDNLILTG 155
D +TG
Sbjct: 437 DGKRFVTG 444
Score = 44 (20.5 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSI 38
+ILT H + F + +G KD +V++W +
Sbjct: 329 QILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQV 364
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 70/255 (27%), Positives = 106/255 (41%)
Query: 14 ALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGND 73
A+A P + + S D ++ LW SAT G S + + P DG
Sbjct: 1049 AVAFSPDDKQLASSSLDSTIKLWD-------SATGELQRTLEGHSQGVRSVTFSP-DGKL 1100
Query: 74 KAA---DG------PSVGP-RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 123
A+ DG P G + G D V+ V F P Q S DS + LWD+
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ-LASGYYDSTIKLWDSAT 1159
Query: 124 GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG 183
G +++ + H + V ++P D L+ +GS D + +++D G + FEG
Sbjct: 1160 GE--LLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQTAKLWDP------ATGELLQIFEG 1210
Query: 184 HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG-LFFQHAGH 242
HS V V +SPD + SS+ + +WD V ++ Q + AG + F G+
Sbjct: 1211 HSKWVESVAFSPD-GKLLASSSYGETIKLWD--PVTGELLQTLNDPDESAGSVAFSPDGN 1267
Query: 243 RDKVVD-FHWNASDP 256
R VD F DP
Sbjct: 1268 RLASVDIFDTKIWDP 1282
Score = 137 (53.3 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 149
H VE V F P Q DD+ I WD G +++ H + + ++P D
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKI-WDPATGE--LLQTLDGHSGTVESLAFSP-DG 804
Query: 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 209
L+ +GS DN++ ++D + G + FEGH ++ V ++PD + S+++D
Sbjct: 805 KLLASGSYDNTIDLWD------SATGELLQTFEGHPHSIWSVAFAPDGKEL-ASASDDST 857
Query: 210 LNIWD 214
+ IWD
Sbjct: 858 IKIWD 862
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/203 (23%), Positives = 83/203 (40%)
Query: 14 ALAMCPTEPYVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAGSSGSIIKQSPKPG-DG 71
A+A P +++SG D ++ LW + + S D + + A + KQ D
Sbjct: 1007 AVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDS 1066
Query: 72 NDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV 131
K D + + GH V VTF P + S D + LW+ G
Sbjct: 1067 TIKLWDSATGELQRTLEGHSQGVRSVTFSPDG-KLLASNSYDGTIKLWNPLTGELQQTLT 1125
Query: 132 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 191
++ D V ++P D + +G D++++++D + G + EGHS + V
Sbjct: 1126 GRSDWVD--SVAFSP-DGKQLASGYYDSTIKLWD------SATGELLQTLEGHSDRIQSV 1176
Query: 192 QWSPDKSSVFGSSAEDGLLNIWD 214
+SPD + S + D +WD
Sbjct: 1177 VFSPD-GKLLASGSYDQTAKLWD 1198
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 54/210 (25%), Positives = 88/210 (41%)
Query: 19 PTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSA----GSSGSIIKQSPKPGDGN-- 72
P E V S K +V S D T DPAT + G SG++ + P DG
Sbjct: 752 PVESVVFSPD-GKQLVSGSYDD--TVKIWDPATGELLQTLDGHSGTVESLAFSP-DGKLL 807
Query: 73 -----DKAAD--GPSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG 124
D D + G + GH ++ V F P +E S DDS + +WD +
Sbjct: 808 ASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDG-KELASASDDSTIKIWD--LA 864
Query: 125 TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH 184
T + + +H + V ++P D L+ + S D+++++++ G EG
Sbjct: 865 TGELQQTLDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNP------ATGELQQSLEGR 917
Query: 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
S V V +SPD + S +E + +W+
Sbjct: 918 SGWVKSVAFSPDGKKL-ASGSEKNTVKLWN 946
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 55/224 (24%), Positives = 93/224 (41%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS 60
++ L GH E +LA P + SG D ++ LW SAT G S
Sbjct: 785 LQTLDGHSGTVE-SLAFSPDGKLLASGSYDNTIDLWD-------SATGELLQTFEGHPHS 836
Query: 61 IIKQSPKPGDGND--KAADGPSVGPRGIYNG--------HEDTVEDVTFCPSSAQEFCSV 110
I + P DG + A+D ++ + G H +V V F P + S
Sbjct: 837 IWSVAFAP-DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG-KLLASS 894
Query: 111 GDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170
DS + +W+ G + + + + V ++P D + +GS N+V++++
Sbjct: 895 SLDSTIKVWNPATGE--LQQSLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNP---- 947
Query: 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G + EGHS +V V +SPD + SS+ D + +W+
Sbjct: 948 --ATGELLQTLEGHSQSVRSVAFSPDGKQL-ASSSSDTTIKLWN 988
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 48/220 (21%), Positives = 95/220 (43%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP--ATAKSAGSS 58
++ GH + +++A P + S D ++ +W + D + +S S
Sbjct: 827 LQTFEGHPHSI-WSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFS 885
Query: 59 --GSIIKQSPKPGDGNDKAADGPSVGP-RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC 115
G ++ S D K + P+ G + G V+ V F P ++ S + +
Sbjct: 886 PDGKLLASSSL--DSTIKVWN-PATGELQQSLEGRSGWVKSVAFSPDG-KKLASGSEKNT 941
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LW+ G +++ + H + V ++P D + + S+D +++++ N T+ G
Sbjct: 942 VKLWNPATGE--LLQTLEGHSQSVRSVAFSP-DGKQLASSSSDTTIKLW---NSTT---G 992
Query: 176 SPINKFEGHSAAVLCVQWSPD-KSSVFGSSAEDGLLNIWD 214
F+GH + V +SPD K V GS +D + +WD
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGS--DDNTIKLWD 1030
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 142 (55.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 50/213 (23%), Positives = 88/213 (41%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSAT-DPATAKSAGSSGS 60
IL H D A ++ E ++++G ++ W S +++ + T + + +
Sbjct: 2 ILQAH-DQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRT 60
Query: 61 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 120
+K D K D GH V+ V + P+ + S G D + LWD
Sbjct: 61 DLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSL-LVSGGKDYLVKLWD 119
Query: 121 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 180
A+ G ++ H + CV WN + N +LT S D ++++D R++ +
Sbjct: 120 AKSGRE--LRSFHGHKNIVQCVKWNQ-NGNWVLTASKDQIIKLYDIRSMKE------LES 170
Query: 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213
F GH+ V + W P F S + DG + W
Sbjct: 171 FRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHW 203
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 144 (55.7 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 44/180 (24%), Positives = 83/180 (46%)
Query: 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD-ARVGTSPVIKVEKAHDAD 138
S RG + DV + + + + + +WD ++ G + V H+
Sbjct: 54 SCNMRGKNQNLSYSANDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERT 113
Query: 139 LHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS 198
H V ++ + N++++GS D +++ FD R+ S IN + +S +V V++SP
Sbjct: 114 AHTVTFHSSEPNILISGSQDGTIKCFDIRSDKS------INTYFCNSESVRDVKFSPHTQ 167
Query: 199 SVFGSSAEDGLLNIWDYEKVGKKVEQ-----GP-RTTNYPAGLFFQHAGHRDKVVDFHWN 252
++F + +E+G + +WD K K + Q GP T ++ + G RDK + WN
Sbjct: 168 NIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWHPTRNWLATGSRDKQIKV-WN 226
Score = 134 (52.2 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 129
DG K D S Y + ++V DV F P + F +V ++ + LWD R ++
Sbjct: 133 DGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMV 192
Query: 130 KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVL 189
+ AH ++ DW+P N + TGS D ++++ N G P + H+ AV+
Sbjct: 193 QFT-AHYGPVYTCDWHPTR-NWLATGSRDKQIKVW-------NMDGRPGLEHTIHTIAVV 243
Query: 190 C-VQWSPDKSSVFGSSA--EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238
V+W P+++ S A D +++WD + TN G+ +Q
Sbjct: 244 GRVKWRPERTYHIASCALVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQ 295
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 140 (54.3 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 207
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 208 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 261
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPA 233
++ +WD G+++ T PA
Sbjct: 262 NVI-MWD-PYTGERLRSLHHTQVDPA 285
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 140 (54.3 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 65/244 (26%), Positives = 104/244 (42%)
Query: 26 SGGKDKSVVLWSIQDHIT----SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81
+G D + +W +Q + S D S +GS+I S D + D
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASR-DKTLRIWDLNKH 186
Query: 82 GPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 140
G + + +GH V + P + CS + + LW R T +I+ + H + +
Sbjct: 187 GKQIQVLSGHLQWVYCCSISPDCSM-LCSAAGEKSVFLWSMRSYT--LIRKLEGHQSSVV 243
Query: 141 CVDWNPLDDNLILTGSADNSVRMFDR------RNLTSNGVGSPINKFEGHSAAVLCVQWS 194
D++P D L++T S D SV M+D R+L + +P++ + H +++ V +S
Sbjct: 244 SCDFSP-DSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFS 302
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG-----HRDKVVDF 249
P+ + A+D LL IW E + V P T N FF H G RD V F
Sbjct: 303 PE-GLYLATVADDRLLRIWALE-LKAPVAFAPMT-NGLCCTFFPHGGVIATGTRDGHVQF 359
Query: 250 HWNA 253
W A
Sbjct: 360 -WTA 362
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 140 (54.3 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 209
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 210 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 263
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPA 233
++ +WD G+++ T PA
Sbjct: 264 NVI-MWD-PYTGERLRSLHHTQVDPA 287
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 132 (51.5 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
D V V F + S G D+ ++L+D R T PV KV + +C+ WNP++
Sbjct: 220 DNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNT-PVHKVVTS--LRNNCITWNPMEAFN 276
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
TG+ D++ ++D RNL + ++GH A++ V ++P + S D +
Sbjct: 277 FATGNEDHNGYLYDMRNLQKT-----LKVYKGHVGAIMDVDFAPTGQELVTGSY-DKTIR 330
Query: 212 IW 213
+W
Sbjct: 331 LW 332
Score = 48 (22.0 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA 46
GH+D F + SG D + W++ D + +++
Sbjct: 65 GHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETAS 105
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 132 (51.5 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
D V V F + S G D+ ++L+D R T PV KV + +C+ WNP++
Sbjct: 220 DNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNT-PVHKVVTS--LRNNCITWNPMEAFN 276
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
TG+ D++ ++D RNL + ++GH A++ V ++P + S D +
Sbjct: 277 FATGNEDHNGYLYDMRNLQKT-----LKVYKGHVGAIMDVDFAPTGQELVTGSY-DKTIR 330
Query: 212 IW 213
+W
Sbjct: 331 LW 332
Score = 48 (22.0 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA 46
GH+D F + SG D + W++ D + +++
Sbjct: 65 GHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETAS 105
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 141 (54.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 364 PLARMTGHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 420
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 421 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLATDL---PGHADEVYAVDWSPDGQRV-A 472
Query: 203 SSAEDGLLNIW 213
S +D L IW
Sbjct: 473 SGGKDKCLRIW 483
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
+ S DD L LW P+ ++ H A ++ V ++P D ++ + S D S++++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 399
Query: 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 167 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 224
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 225 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 278
Query: 208 GLLNIWDYEKVGKKVEQGPRTTNYPA 233
++ +WD G+++ T PA
Sbjct: 279 NVI-MWD-PYTGERLRSLHHTQVDPA 302
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 68/268 (25%), Positives = 109/268 (40%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS 60
++ L GH LA P + +G DK++ LW D IT+ +PA A
Sbjct: 215 IDTLVGHMAGVS-CLAWSPDSGTLATGSDDKAIRLW---DRITA---EPAHAVGTQDGDD 267
Query: 61 IIKQSPKPGDGNDKAADGPSVG----P-RGIYN---GHEDTVEDVTFCPSSAQEFCSVGD 112
++ G A G VG P RG GH + V + F P S
Sbjct: 268 DAERGRTHGGTRISGASGIGVGGGGGPARGTRRPLLGHHNYVYCLAFSPKG-NILASGSY 326
Query: 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN 172
D + LWD R G +++ AH + +D+ D L+++ S D +R++D T
Sbjct: 327 DEAVFLWDVRAGR--LMRSLPAHSDPVSGIDFCR-DGTLVVSCSTDGLIRIWD--TATGQ 381
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY----EKVGKKVEQGPRT 228
+ + +++ + AV V +SP+ + + D + +WDY KV KK QG
Sbjct: 382 CLRTLVHE---DNPAVTNVCFSPNGRYILAFNL-DSCIRLWDYIAHPSKV-KKTYQGHVN 436
Query: 229 TNYP-AGLFFQHAGHRDKVVDFHWNASD 255
T + G F +++ D N D
Sbjct: 437 TGFSIGGCFGVVQDEEEEIEDEQQNGED 464
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 141 (54.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 49/219 (22%), Positives = 94/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A S
Sbjct: 246 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 302
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 303 NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 359
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 360 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 408
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 409 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 444
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 137 (53.3 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
+ GH+ +VE V+F P S Q S G D I+W+ + G + V H + D++
Sbjct: 105 VLKGHQRSVETVSFSPDSKQ-LASGGWDKRAIVWEVQSGRRVHLLV--GHCDSIQSSDFS 161
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
P D+L TGS D++V ++D R S V S N EGH+ + C+ +S S + S +
Sbjct: 162 PTSDSLA-TGSWDSTVHIWDLR--ASTPVVSYHN-LEGHTGNISCLCYSA--SGLLASGS 215
Query: 206 EDGLLNIW 213
D + +W
Sbjct: 216 WDKTICVW 223
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 141 (54.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 48/219 (21%), Positives = 93/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
+++LTGH + L + E +++G D +V +W + + ++ + A
Sbjct: 258 LKVLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC 314
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 315 NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 371
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 372 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 420
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 421 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 456
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 145 (56.1 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 40/147 (27%), Positives = 65/147 (44%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
+ +GH + D+ F P + D+ + WD R P A V WN
Sbjct: 109 VLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQ-VKWN 167
Query: 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
D N +L S N + ++D R G +P+ +GH ++V + ++ K S SS+
Sbjct: 168 YKDPN-VLASSHGNDIFVWDLRK----G-STPLCSLKGHVSSVNSIDFNRFKYSEIMSSS 221
Query: 206 EDGLLNIWDYEKVGKKVEQGPRTTNYP 232
DG + WDY K + ++ TTN+P
Sbjct: 222 NDGTVKFWDYSKSTTESKRTV-TTNFP 247
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 139 (54.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 207
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 208 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 261
Query: 208 GLLNIWD 214
++ +WD
Sbjct: 262 NVI-MWD 267
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 139 (54.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 207
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 208 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 261
Query: 208 GLLNIWD 214
++ +WD
Sbjct: 262 SVI-MWD 267
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 209
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 210 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 263
Query: 208 GLLNIWD 214
++ +WD
Sbjct: 264 NVI-MWD 269
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 209
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 210 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 263
Query: 208 GLLNIWD 214
++ +WD
Sbjct: 264 NVI-MWD 269
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 134 (52.2 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDA--RVGTSPVIKV-----EKAHDADLH 140
GH + V + C Q+F G C + +WD G V+ + E+AH+ D++
Sbjct: 430 GHSNAVGSIA-CSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVN 488
Query: 141 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200
V +P +D L+ +GS D + +++ +L GV GH V VQ+SP +
Sbjct: 489 SVCVSP-NDKLLASGSQDRTAKLWALSDLRLLGV------CRGHRRGVWSVQFSP-VDQI 540
Query: 201 FGSSAEDGLLNIWDYE 216
GS++ DG + IW +
Sbjct: 541 LGSASADGSVRIWSIQ 556
Score = 53 (23.7 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 40
+L H ALA P ++S G+DK +W +Q+
Sbjct: 187 VLESHYSPVT-ALAFSPDGHTLVSSGRDKICSVWDLQE 223
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 139 (54.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 69 GDGNDKAADGPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP 127
G+G K V P+ GH +++ V + +S + D L +WD +
Sbjct: 228 GEGTSKRMKESGVRTPKITLQGHRESISAVQWMDAST--LLTGSWDHTLKVWDLSLEG-- 283
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSA 186
IK E + + + ++ L+ +LILT SAD ++R++D R T+ G S + N + GH+A
Sbjct: 284 -IKAEISTNKSIFDASYSKLN-HLILTASADKNLRLYDSR--TNQG--SVVRNTYLGHNA 337
Query: 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246
V V WS + +F S + D +WD + P+ Y GH +KV
Sbjct: 338 WVQTVMWSTTEEFLFVSGSYDNQNKLWDC--------RSPKAPLYDL------LGHGEKV 383
Query: 247 VDFHWN 252
+D W+
Sbjct: 384 LDIDWS 389
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00066
Identities = 39/149 (26%), Positives = 62/149 (41%)
Query: 89 GHEDTVEDVTFCP--SSAQEFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVDW 144
GH ++ V + F S D +LW VG + V + V K H+ + V
Sbjct: 142 GHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSV 201
Query: 145 NPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQWS 194
+P D TGS D ++++ + + +GV +P +GH ++ VQW
Sbjct: 202 SP-DGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQWM 260
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
D S++ S D L +WD G K E
Sbjct: 261 -DASTLLTGSW-DHTLKVWDLSLEGIKAE 287
>CGD|CAL0000686 [details] [associations]
symbol:PEX7 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;ISO] [GO:0016560
"protein import into peroxisome matrix, docking" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000686 GO:GO:0005829 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/214 (28%), Positives = 92/214 (42%)
Query: 25 LSGGKDKSVVLWSI---QDHIT--SSATDPAT--AKSAGSSGSIIKQSPKPGDGNDKAAD 77
+SG D ++ LWS Q +T S+ D +T A +AGS+ + P A
Sbjct: 121 VSGSWDGNIKLWSPNRPQSLLTLNSNVMDYSTRVAPNAGSASVPLSHQP---------AH 171
Query: 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 137
P + N + + F P S S S + +WD R +P+ AH
Sbjct: 172 QPQQQQQQQVNT-ANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVR-SPNPLQLKFTAHGG 229
Query: 138 -DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT-----------SNGV--G-SPINKFE 182
+ VDWN +I +G D SVR++D R++T ++G G +P+N+
Sbjct: 230 LEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTPLNELI 289
Query: 183 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
GH AV VQWSP S++ D IW+ E
Sbjct: 290 GHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDE 323
>UNIPROTKB|Q59WW3 [details] [associations]
symbol:PEX7 "Potential intraperoxisomal protein receptor
Pex7" species:237561 "Candida albicans SC5314" [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0016560 "protein import into peroxisome matrix,
docking" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000686 GO:GO:0005829
GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/214 (28%), Positives = 92/214 (42%)
Query: 25 LSGGKDKSVVLWSI---QDHIT--SSATDPAT--AKSAGSSGSIIKQSPKPGDGNDKAAD 77
+SG D ++ LWS Q +T S+ D +T A +AGS+ + P A
Sbjct: 121 VSGSWDGNIKLWSPNRPQSLLTLNSNVMDYSTRVAPNAGSASVPLSHQP---------AH 171
Query: 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 137
P + N + + F P S S S + +WD R +P+ AH
Sbjct: 172 QPQQQQQQQVNT-ANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVR-SPNPLQLKFTAHGG 229
Query: 138 -DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT-----------SNGV--G-SPINKFE 182
+ VDWN +I +G D SVR++D R++T ++G G +P+N+
Sbjct: 230 LEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTPLNELI 289
Query: 183 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
GH AV VQWSP S++ D IW+ E
Sbjct: 290 GHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDE 323
>MGI|MGI:1917162 [details] [associations]
symbol:Nup43 "nucleoporin 43" species:10090 "Mus musculus"
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1917162 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 GO:GO:0051028 GO:GO:0000777
GO:GO:0031080 eggNOG:NOG270547 KO:K14305 CTD:348995
HOGENOM:HOG000007964 HOVERGEN:HBG052696 OMA:QWTAAHY EMBL:AK090019
EMBL:AC156391 IPI:IPI00177202 RefSeq:NP_663752.2 UniGene:Mm.299887
ProteinModelPortal:P59235 SMR:P59235 STRING:P59235
PhosphoSite:P59235 PaxDb:P59235 PRIDE:P59235
Ensembl:ENSMUST00000040135 GeneID:69912 KEGG:mmu:69912
UCSC:uc007eid.2 GeneTree:ENSGT00390000004803 InParanoid:P59235
OrthoDB:EOG4TMR2F NextBio:330593 Bgee:P59235 CleanEx:MM_NUP43
Genevestigator:P59235 GermOnline:ENSMUSG00000040034 Uniprot:P59235
Length = 380
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/179 (26%), Positives = 76/179 (42%)
Query: 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHD-ADLHC 141
R I N T+ VTF + E +V L +WD R G+ P + D LHC
Sbjct: 165 RTIDNADSSTLHAVTFLRTP--EIVTVNSIGQLKIWDFRQQGSEPCQILSLTGDRVPLHC 222
Query: 142 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 201
VD +P +++ TG D + ++D R T P++ + H A + V + P
Sbjct: 223 VDRHPDQQHVVATGGQDGMLSIWDVRQGTM-----PVSLLKAHEAEMWEVHFHPSNPDHL 277
Query: 202 GSSAEDGLLNIWDYE----KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
+ +EDG L WD + QG R++ + + AG +V W ++DP
Sbjct: 278 FTCSEDGSLWHWDASTDAPEKSSLFHQGGRSSTFLSHSLSNQAGVHQSLVS-SWLSTDP 335
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/129 (25%), Positives = 67/129 (51%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+GH + D+ + P ++ S DD + LW+ + IK+ + H + + +
Sbjct: 65 SGHTKGISDIVYSPINSNILASCSDDLTIRLWN--ITQQRCIKLLRKHTYHITTLKFTQ- 121
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
N++++GS+D ++ ++D +TSNG G + HS V + +PD S+ S++ D
Sbjct: 122 KGNILISGSSDETITIWD---ITSNG-GKILTTLAAHSDPVSSIALTPD-DSIIVSASYD 176
Query: 208 GLLNIWDYE 216
GL+ ++D +
Sbjct: 177 GLMRLFDLQ 185
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/131 (29%), Positives = 65/131 (49%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH + + +F P S+ S DS +WD GT P+ + K H + + V ++P +
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGT-PLHTL-KGHTSWVLAVSYSP-N 202
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG-----S 203
+I TGS DN+VR++D + +G+P+ +GH + + W P G S
Sbjct: 203 GAMIATGSMDNTVRIWDAKK--GQALGAPL---KGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 204 SAEDGLLNIWD 214
+++D + IWD
Sbjct: 258 ASKDSTVRIWD 268
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 37/125 (29%), Positives = 57/125 (45%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH+ V VTF P A S G D+ + LW+ R G I + H ++ ++ D
Sbjct: 403 GHQKEVNHVTFSPDMAY-IASAGFDNHVKLWNGRDGK--FITTLRGHVGAVYQCCFSA-D 458
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
L+++ S D ++++++ R G GH V V WSPD V GS +D
Sbjct: 459 SRLLVSSSKDTTLKVWNVRT------GKLSEDLPGHKDEVFAVDWSPDGQKV-GSGGKDK 511
Query: 209 LLNIW 213
+ IW
Sbjct: 512 AIRIW 516
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
++ S DD + LWD + PV ++ H +++ V ++P D I + DN V+++
Sbjct: 375 EKLVSASDDFTMYLWDPESSSKPVARL-LGHQKEVNHVTFSP-DMAYIASAGFDNHVKLW 432
Query: 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224
+ R+ G I GH AV +S D S + SS++D L +W+ + GK E
Sbjct: 433 NGRD------GKFITTLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVWNV-RTGKLSED 484
Query: 225 GP 226
P
Sbjct: 485 LP 486
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/219 (22%), Positives = 93/219 (42%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGS 57
++ILTGH + L + E +++G D +V +W + + ++ + A
Sbjct: 258 LKILTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC 314
Query: 58 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 117
+G ++ S A + R + GH V V F + S D +
Sbjct: 315 NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 371
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
+W T ++ H + C+ + D L+++GS+DN++R++D G+
Sbjct: 372 VWST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGAC 420
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ EGH V C+++ +K V G A DG + +WD +
Sbjct: 421 LRVLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 456
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
++ GH V + P +F S D + +W +SP +E HD ++C+D+
Sbjct: 137 VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-SSSPNFTLE-GHDKGVNCIDYY 194
Query: 146 PLDDN-LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
D +++G+ D V+++D +N T + EGH+ V CV + P+ + S
Sbjct: 195 SGGDKPYLISGADDRLVKIWDYQNKTC------VQTLEGHAQNVSCVNFHPELPIIITGS 248
Query: 205 AEDGLLNIW 213
EDG + IW
Sbjct: 249 -EDGTVRIW 256
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 53/220 (24%), Positives = 94/220 (42%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSATD-PATA-KSAGSS 58
LT D + ++ + P+EP++L+ + SV +W+ + T D P A K
Sbjct: 11 LTARSDRVK-SVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARK 69
Query: 59 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 118
+I + D + + ++ ++ H D + + P+ S DD + L
Sbjct: 70 NWVITGAD---DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTS-SDDMLIKL 125
Query: 119 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178
WD S +V + H + + NP D+N + S D +++++ G SP
Sbjct: 126 WDWEKKWS-CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL------GSSSPN 178
Query: 179 NKFEGHSAAVLCVQW--SPDKSSVFGSSAEDGLLNIWDYE 216
EGH V C+ + DK + S A+D L+ IWDY+
Sbjct: 179 FTLEGHDKGVNCIDYYSGGDKPYLI-SGADDRLVKIWDYQ 217
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/217 (23%), Positives = 92/217 (42%)
Query: 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHIT--SSATDPATAKSAGSSGSI 61
GH + + P Y+LS +D + LWS++ ++ P S G
Sbjct: 677 GHSGPV-YGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFY 735
Query: 62 IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWD 120
+ D + + P I+ GH V F P+ + + G +D LW+
Sbjct: 736 FATASH--DRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNI--NYLATGSNDKSARLWE 791
Query: 121 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 180
+ G +++ H A ++ V ++P D L+ T D SV ++D L++ G + K
Sbjct: 792 IQTGKC--VRIFMGHRAPIYTVAFSP-DGRLLATAGEDTSVILWD---LST---GKKVKK 842
Query: 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
+GH+ V + +S D S+ S + D + +WD +K
Sbjct: 843 MDGHTKCVYSLDFSCD-GSILASGSSDCTVRLWDVKK 878
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/140 (26%), Positives = 71/140 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-------SPVIKV---EKAHDA 137
NGH TV ++F ++ + + DD L +W + +P I + HD
Sbjct: 210 NGHSSTVWSISF-NAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDR 268
Query: 138 DLHCVDWNPLDDNLILTGSADNSVRMF-DRRNLTSNGVGSPI--NKFEGHSAAVLCVQWS 194
++ W+ D++I +G+ DN++R+F D ++ + +G + K + H V VQWS
Sbjct: 269 TIYSAHWSR--DDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWS 326
Query: 195 PDKSS-VFGSSAEDGLLNIW 213
P + + + S+++DG++ IW
Sbjct: 327 PGEGNRLLASASDDGMVKIW 346
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/132 (28%), Positives = 61/132 (46%)
Query: 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142
P +GH + + V + S A+E CS D + LWDA G +K + + V
Sbjct: 237 PLATLSGHTEAISSVLW--SDAEEICSASWDHTIKLWDAETGG---LKSTLTGNKVFNSV 291
Query: 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202
++PL L +GS D +R++D R+ + V + H+ V V+WSP
Sbjct: 292 SYSPLCRRLA-SGSTDRHIRLWDPRSKDGSLV---LLSLTSHTGWVTSVKWSPTHEHQLI 347
Query: 203 SSAEDGLLNIWD 214
S + D ++ +WD
Sbjct: 348 SGSLDNIVKLWD 359
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 36/154 (23%), Positives = 66/154 (42%)
Query: 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 129
D K D + G + G++ V++ P + S D + LWD R ++
Sbjct: 265 DHTIKLWDAETGGLKSTLTGNK-VFNSVSYSPL-CRRLASGSTDRHIRLWDPRSKDGSLV 322
Query: 130 KVE-KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAV 188
+ +H + V W+P ++ +++GS DN V+++D R+ + P+ H V
Sbjct: 323 LLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWDTRSCKA-----PLYDLAAHEDKV 377
Query: 189 LCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 222
LCV W+ ++ + S D L + Y V
Sbjct: 378 LCVDWT--EAGLLLSGGADNKLYCYRYPATASDV 409
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/137 (27%), Positives = 74/137 (54%)
Query: 93 TVEDVTFCPSSAQEF----CSVGDDSCLILWDA-RVGTSPVIKVEKAHDADLHCVDWNPL 147
T D + PS + + + + +++W+ R G+ V +V H ++ + W+P
Sbjct: 68 TGNDCCWHPSLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPE 127
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+ ILTGS DN++RM+D R+ ++N S I F S ++ VQ++P +++ F ++ ++
Sbjct: 128 KLDCILTGSQDNTLRMWDIRD-SANA--SKIT-FSPKSESIRDVQFNPSQANQFAAAFDN 183
Query: 208 GLLNIWDYEKVGKKVEQ 224
G + +WD K VE+
Sbjct: 184 GTIQLWDIRKPTIAVEK 200
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 36/181 (19%), Positives = 75/181 (41%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDW 144
++ H V + + P + D+ L +WD R ++ K+ + ++ + V +
Sbjct: 111 VFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIR-DSANASKITFSPKSESIRDVQF 169
Query: 145 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
NP N + +++++D R T + K H VL + W P++ ++ S
Sbjct: 170 NPSQANQFAAAFDNGTIQLWDIRKPTI-----AVEKITSHQGLVLTIDWHPEEKNIIASG 224
Query: 205 AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ-----HAGHRDKVVDF--H-WNASDP 256
D + +WD+ GK + T + + + ++ H +VDF H W+ P
Sbjct: 225 GRDRAIRVWDFSN-GKSLNN-VSTISSVSRIKWRPGNKWHIASCSSIVDFQIHIWDVKKP 282
Query: 257 W 257
+
Sbjct: 283 Y 283
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/185 (27%), Positives = 83/185 (44%)
Query: 69 GDGNDKAADGPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP 127
G+G K V P+ GH +++ V + +S + D L +WD +
Sbjct: 228 GEGTSKRMKESGVRTPKMTLQGHRESISAVQWMDAST--LLTGSWDHTLKVWDLSLEG-- 283
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSA 186
IK E + + + ++ L+ LI+T SAD ++R++D R T+ G S + N + GH+A
Sbjct: 284 -IKTEISTNKSIFDASYSNLN-RLIVTASADKNLRLYDAR--TNQG--SVVRNTYLGHNA 337
Query: 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246
V V WS + +F S A D +WD + P+ Y GH +KV
Sbjct: 338 WVQAVMWSTTEEFLFVSGAYDNQNKLWDC--------RSPKAPLYDL------LGHGEKV 383
Query: 247 VDFHW 251
+D W
Sbjct: 384 LDIDW 388
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 88 NGHEDTVEDVTFCPSSAQE--FCSVGDDSCLILWDARVG--TSPVIKVEKAHDADLHCVD 143
+GH ++ V + + F S D +LW VG T+ + V K H+ + V
Sbjct: 141 SGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDSVS 200
Query: 144 WNPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQW 193
+P D TGS D ++++ + + +GV +P +GH ++ VQW
Sbjct: 201 VSP-DGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQGHRESISAVQW 259
Query: 194 SPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
D S++ S D L +WD G K E
Sbjct: 260 M-DASTLLTGSW-DHTLKVWDLSLEGIKTE 287
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/185 (27%), Positives = 84/185 (45%)
Query: 69 GDGNDKAADGPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP 127
G+G K V P+ GH +++ V + +S + D L +WD +
Sbjct: 228 GEGTSKRMKESGVRTPKITLQGHRESISAVQWMDAST--LLTGSWDHTLKVWDLSLEG-- 283
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSA 186
IK E + + + ++ L+ +LILT SAD ++R++D R T+ G S + N + GH+A
Sbjct: 284 -IKAEISTNKSIFDASYSKLN-HLILTASADKNLRLYDSR--TNQG--SVVRNTYLGHNA 337
Query: 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246
V V WS + +F S + D +WD + P+ Y GH +KV
Sbjct: 338 WVQTVMWSTTEEFLFVSGSYDNQNKLWDC--------RSPKAPLYDL------LGHGEKV 383
Query: 247 VDFHW 251
+D W
Sbjct: 384 LDIDW 388
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00066
Identities = 39/149 (26%), Positives = 62/149 (41%)
Query: 89 GHEDTVEDVTFCP--SSAQEFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVDW 144
GH ++ V + F S D +LW VG + V + V K H+ + V
Sbjct: 142 GHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSV 201
Query: 145 NPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQWS 194
+P D TGS D ++++ + + +GV +P +GH ++ VQW
Sbjct: 202 SP-DGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQWM 260
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
D S++ S D L +WD G K E
Sbjct: 261 -DASTLLTGSW-DHTLKVWDLSLEGIKAE 287
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 59/228 (25%), Positives = 94/228 (41%)
Query: 6 GHQDNAEFALAMCPTEPY---VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
GH D PT+P ++S +DK +++W+I S A G S +I
Sbjct: 19 GHSDWV--TSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIN 76
Query: 63 KQS-PKPG----DGN-DKAAD--GPSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDD 113
S G G+ D + S+G + GH V V+F P + Q S D
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ-IVSASRD 135
Query: 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSN 172
+ LW+ I ++ H + CV ++P + I+ D V++++ +N N
Sbjct: 136 KTIKLWNTLAQCKYTI-TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220
EGH+ + V SPD S+ S +DG+ +WD K GK
Sbjct: 195 ------KNLEGHTGVLNTVTISPD-GSLCASGGKDGVAKLWDV-KEGK 234
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 59/228 (25%), Positives = 94/228 (41%)
Query: 6 GHQDNAEFALAMCPTEPY---VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
GH D PT+P ++S +DK +++W+I S A G S +I
Sbjct: 19 GHSDWV--TSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIN 76
Query: 63 KQS-PKPG----DGN-DKAAD--GPSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDD 113
S G G+ D + S+G + GH V V+F P + Q S D
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ-IVSASRD 135
Query: 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSN 172
+ LW+ I ++ H + CV ++P + I+ D V++++ +N N
Sbjct: 136 KTIKLWNTLAQCKYTI-TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220
EGH+ + V SPD S+ S +DG+ +WD K GK
Sbjct: 195 ------KNLEGHTGVLNTVTISPD-GSLCASGGKDGVAKLWDV-KEGK 234
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/235 (21%), Positives = 98/235 (41%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH-------ITSSATDPATAK 53
+ +L GH++ + +A P+ + + +DKSV +W + + + +S T
Sbjct: 98 LTVLEGHENEVK-CVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHV 156
Query: 54 SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDD 113
+ ++ + + R GH TV +TF PS Q S DD
Sbjct: 157 VWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSG-QRLASCSDD 215
Query: 114 SCLILW-DARVGTSP------VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166
+ +W + + G V + H ++ + W PL L T D+ VR+F +
Sbjct: 216 RTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALA-TACGDDGVRVF-K 273
Query: 167 RNLTSNGVGSPINKF-----EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
+ T++ P+ + HS V C+ W P ++ + S +++G + +W+Y+
Sbjct: 274 EDETADP-DQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVWNYQ 327
>UNIPROTKB|A8XL02 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 EMBL:HE600904 HAMAP:MF_03029
ProteinModelPortal:A8XL02 STRING:A8XL02 EnsemblMetazoa:CBG14922
WormBase:CBG14922 HOGENOM:HOG000154844 Uniprot:A8XL02
Length = 446
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/173 (27%), Positives = 77/173 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAG-- 56
M + GH+D ++ CP + + S D +VV W ++ S P + S
Sbjct: 279 MVTIGGHRDKVS-SVVWCPWKSGHAFSCSWDHTVVQWDLELAGEVSRIKGPKSFTSIDIH 337
Query: 57 -SSGSIIKQSPK--PGDGNDKAADGPSVGPRGIYNGHEDT-VEDVTFCPSSAQEFCSVGD 112
+S +I P + K DG V + + GH++ VE V + P +F SV
Sbjct: 338 PTSNLLISSCTDAIPRLYDPKNRDGAMV--KQSFIGHQNGWVESVKWNPVDENQFVSVST 395
Query: 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165
D +WD R S + + H+ + C WN + LI TGSAD S+++F+
Sbjct: 396 DKTAKMWDVRSSKSSLFDIH-GHEDRILCAAWN---EGLIATGSADCSIKIFE 444
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 52/215 (24%), Positives = 88/215 (40%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
+ GH+ E +++ +SG D ++ +W++ +D AT S
Sbjct: 213 VFRGHERAVE-CVSVNSDATRAISGSVDTNLKVWNLDP------SDEATIYEKEEEESSA 265
Query: 63 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122
K+ K D K P GH D V V +CP + S D ++ WD
Sbjct: 266 KKKRKK-DTRTKV-------PMVTIGGHRDKVSSVVWCPWKSGHAFSCSWDHTVVQWDLE 317
Query: 123 V-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK- 180
+ G IK K+ + +D +P NL+++ D R++D +N G+ + +
Sbjct: 318 LAGEVSRIKGPKSFTS----IDIHPTS-NLLISSCTDAIPRLYDPKNRD----GAMVKQS 368
Query: 181 FEGHSAA-VLCVQWSPDKSSVFGSSAEDGLLNIWD 214
F GH V V+W+P + F S + D +WD
Sbjct: 369 FIGHQNGWVESVKWNPVDENQFVSVSTDKTAKMWD 403
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 100 (40.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+++ I +GS D+ V ++ +R+ PI + GH+ V CV W+P S+ S+++D
Sbjct: 494 NEDFIASGSEDHKVYIWHKRSEL------PIVELTGHTRTVNCVSWNPCIPSLMASASDD 547
Query: 208 GLLNIW 213
G + IW
Sbjct: 548 GTVRIW 553
Score = 75 (31.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPL 147
GH V + + P + G D C LW V T + K+ ++H+ L V WNP
Sbjct: 311 GHAYGVSYLAWSPDDVY-LIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP- 368
Query: 148 DDNLILTG 155
D +TG
Sbjct: 369 DGKRFVTG 376
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39
+ILT H + F + +G KD +V++W ++
Sbjct: 261 QILTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQVE 297
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/226 (26%), Positives = 94/226 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 101 LKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 159
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q +
Sbjct: 160 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQILTA 213
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
GD +C LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 214 SGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 270
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G I FE H + + V++ P F S ++D ++D
Sbjct: 271 ------GQCIQSFETHDSDINSVRYYPS-GDAFASGSDDATCRLYD 309
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 118 (46.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/149 (25%), Positives = 67/149 (44%)
Query: 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD------ARVGTSPVIK----VEK 133
R GH TV +TF PS Q S DD + +W + GT K +
Sbjct: 187 RATLEGHTSTVWGLTFDPSG-QRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSG 245
Query: 134 AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN------GVGSPINKFEGHSAA 187
H ++ + W PL L T D+ VR+F + + T++ + + + K H+
Sbjct: 246 FHGRTVYDIAWCPLTGALA-TACGDDGVRVF-KEDETADPDQPAFSLSAHVPK--AHTQD 301
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
V C+ W P ++ + S +++G + +W+Y+
Sbjct: 302 VNCIAWHPKEAGLLVSCSDNGEIAVWNYQ 330
Score = 57 (25.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 40
+ +L GH++ + +A P+ + + +DKSV +W + +
Sbjct: 98 LTVLEGHENEVK-CVAWAPSGNLLATCSRDKSVWIWEVDE 136
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/226 (26%), Positives = 94/226 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 59 LKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 117
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q +
Sbjct: 118 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQILTA 171
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
GD +C LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 172 SGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 228
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G + FE H + V V++ P F S ++D ++D
Sbjct: 229 ------GQCVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYD 267
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH+ + V F P S + S D + LWD R G + + H A ++ + W+ D
Sbjct: 370 GHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQIAWSA-D 425
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
L+++GS+D++++++D + + P GH+ V V WSPD V S +D
Sbjct: 426 SRLLVSGSSDSTLKVWDVK-AQKLAMDLP-----GHADEVYAVDWSPDGQRV-ASGGKDK 478
Query: 209 LLNIW 213
L IW
Sbjct: 479 CLRIW 483
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
+ S DD L LW P+ ++ H A ++ V ++P D ++ + S D S++++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLTRMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 399
Query: 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 42 ITSSATDPATAKSA-GSSGSIIK----QSPKPGDGNDKAADGPSVG-PRGIYNGHEDTVE 95
+ S + P + A GS +++K + +G+ K V P+ GH ++V
Sbjct: 197 VDSVSVSPDGLRFATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPKITLQGHRESVS 256
Query: 96 DVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155
V + +S + D L +WD + IK E + + + ++ L+ LILT
Sbjct: 257 AVQWMDAST--LLTGSWDHTLKVWDLSLEG---IKTEISTNKSIFDASYSKLN-RLILTA 310
Query: 156 SADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
SAD ++R++D R T+ G S + N + GH+A V V WS + +F S A D +WD
Sbjct: 311 SADKNLRLYDPR--TNQG--SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWD 366
Query: 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ P+ Y GH +KV+D W+
Sbjct: 367 C--------RSPKAPLYDL------LGHGEKVLDIDWS 390
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 40/150 (26%), Positives = 65/150 (43%)
Query: 88 NGHEDTVEDVTFCPSSAQ--EFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVD 143
+GH ++ V + + F S D +LW VG++ V + V K H+ + V
Sbjct: 142 SGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVS 201
Query: 144 WNPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQW 193
+P D TGS D ++++ + + +GV +P +GH +V VQW
Sbjct: 202 VSP-DGLRFATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 194 SPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
D S++ S D L +WD G K E
Sbjct: 261 M-DASTLLTGSW-DHTLKVWDLSLEGIKTE 288
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/185 (28%), Positives = 83/185 (44%)
Query: 70 DGNDKAADGPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
+G+ K V P+ GH ++V V + A + D L +WD +
Sbjct: 230 EGSSKRMKESGVRTPKITLQGHRESVSAVQWM--DATTLLTGSWDYTLKVWDLSLEG--- 284
Query: 129 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAA 187
IK E + + + ++ L+ LILT SAD ++R++D R T+ G S + N + GH+A
Sbjct: 285 IKTEISTNKSIFDASYSKLN-RLILTASADKNLRLYDPR--TNQG--SVVRNTYLGHNAW 339
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
V V WS + +F S A D +WD + P+ Y GH DKV+
Sbjct: 340 VQTVMWSTTEEFLFVSGAYDNQNKLWDC--------RSPKAPLYDL------LGHGDKVL 385
Query: 248 DFHWN 252
D W+
Sbjct: 386 DIDWS 390
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 88 NGHEDTVEDVTFCPSSAQ--EFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVD 143
+GH ++ V + + F S D +LW VG++ V + V K H+ + V
Sbjct: 142 SGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVS 201
Query: 144 WNPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQW 193
+P D TGS D ++++ + + +GV +P +GH +V VQW
Sbjct: 202 VSP-DGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 194 SPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
+ + GS D L +WD G K E
Sbjct: 261 MDATTLLTGSW--DYTLKVWDLSLEGIKTE 288
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/185 (28%), Positives = 83/185 (44%)
Query: 70 DGNDKAADGPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
+G+ K V P+ GH ++V V + A + D L +WD +
Sbjct: 230 EGSSKRMKESGVRTPKITLQGHRESVSAVQWM--DATTLLTGSWDYTLKVWDLSLEG--- 284
Query: 129 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAA 187
IK E + + + ++ L+ LILT SAD ++R++D R T+ G S + N + GH+A
Sbjct: 285 IKTEISTNKSIFDASYSKLN-RLILTASADKNLRLYDPR--TNQG--SVVRNTYLGHNAW 339
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
V V WS + +F S A D +WD + P+ Y GH DKV+
Sbjct: 340 VQTVMWSTTEEFLFVSGAYDNQNKLWDC--------RSPKAPLYDL------LGHGDKVL 385
Query: 248 DFHWN 252
D W+
Sbjct: 386 DIDWS 390
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 88 NGHEDTVEDVTFCPSSAQ--EFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVD 143
+GH ++ V + + F S D +LW VG++ V + V K H+ + V
Sbjct: 142 SGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVS 201
Query: 144 WNPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQW 193
+P D TGS D ++++ + + +GV +P +GH +V VQW
Sbjct: 202 VSP-DGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 194 SPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
+ + GS D L +WD G K E
Sbjct: 261 MDATTLLTGSW--DYTLKVWDLSLEGIKTE 288
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 14 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 68
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 129 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 241
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 14 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 68
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVF-SASP 284
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 129 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 241
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 14 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 68
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 129 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 241
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|Q8NFH3 [details] [associations]
symbol:NUP43 "Nucleoporin Nup43" species:9606 "Homo
sapiens" [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0007059
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
GO:GO:0015031 GO:GO:0005975 GO:GO:0019221 GO:GO:0015758
GO:GO:0010827 GO:GO:0055085 GO:GO:0051028 GO:GO:0000236
GO:GO:0000777 GO:GO:0031080 eggNOG:NOG270547 KO:K14305
EMBL:AF514997 EMBL:BC065028 EMBL:AK023349 IPI:IPI00742943
RefSeq:NP_942590.1 UniGene:Hs.510375 ProteinModelPortal:Q8NFH3
SMR:Q8NFH3 IntAct:Q8NFH3 STRING:Q8NFH3 PhosphoSite:Q8NFH3
DMDM:27923819 PaxDb:Q8NFH3 PRIDE:Q8NFH3 DNASU:348995
Ensembl:ENST00000340413 Ensembl:ENST00000460354 GeneID:348995
KEGG:hsa:348995 UCSC:uc003qmz.3 CTD:348995 GeneCards:GC06M150087
HGNC:HGNC:21182 HPA:HPA027126 HPA:HPA027291 HPA:HPA028500
MIM:608141 neXtProt:NX_Q8NFH3 PharmGKB:PA134930788
HOGENOM:HOG000007964 HOVERGEN:HBG052696 InParanoid:Q8NFH3
OMA:QWTAAHY PhylomeDB:Q8NFH3 GenomeRNAi:348995 NextBio:99471
ArrayExpress:Q8NFH3 Bgee:Q8NFH3 CleanEx:HS_NUP43
Genevestigator:Q8NFH3 GermOnline:ENSG00000120253 Uniprot:Q8NFH3
Length = 380
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/179 (27%), Positives = 76/179 (42%)
Query: 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHD-ADLHC 141
R I N T+ VTF + E +V L +WD R G P + D LHC
Sbjct: 165 RTIDNADSSTLHAVTFLRTP--EILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHC 222
Query: 142 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 201
VD +P +++ TG D + ++D R T P++ + H A + V + P
Sbjct: 223 VDRHPNQQHVVATGGQDGMLSIWDVRQGTM-----PVSLLKAHEAEMWEVHFHPSNPEHL 277
Query: 202 GSSAEDGLLNIWDYEK-VGKK---VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256
+ +EDG L WD V +K QG R++ + + A V+ W ++DP
Sbjct: 278 FTCSEDGSLWHWDASTDVPEKSSLFHQGGRSSTFLSHSISNQANVHQSVIS-SWLSTDP 335
>MGI|MGI:1289332 [details] [associations]
symbol:Tssc1 "tumor suppressing subtransferable candidate 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1289332 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
eggNOG:NOG314403 HOGENOM:HOG000264967 OMA:ACVAWEP EMBL:AC136986
CTD:7260 HOVERGEN:HBG052937 OrthoDB:EOG4C5CJP EMBL:CT010449
EMBL:BC031458 IPI:IPI00321310 RefSeq:NP_958745.2 UniGene:Mm.273724
ProteinModelPortal:Q8K0G5 SMR:Q8K0G5 STRING:Q8K0G5
PhosphoSite:Q8K0G5 PaxDb:Q8K0G5 PRIDE:Q8K0G5
Ensembl:ENSMUST00000035657 GeneID:380752 KEGG:mmu:380752
UCSC:uc007ngb.2 InParanoid:Q8K0G5 NextBio:401194 Bgee:Q8K0G5
CleanEx:MM_TSSC1 Genevestigator:Q8K0G5
GermOnline:ENSMUSG00000036613 Uniprot:Q8K0G5
Length = 386
Score = 127 (49.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 56/192 (29%), Positives = 83/192 (43%)
Query: 1 MEILTGHQDNAEFALAMCPT-EPYVLSGGK-----DKSVVLWSIQDH-----ITSSATDP 49
+E+L H DN+ C EP + G K D ++LW +Q + SSAT
Sbjct: 123 LELLC-HLDNSAQGNVACVVWEP-MGDGKKVISLADSHILLWDLQPSSSQAVLASSATLE 180
Query: 50 ATAK---SAG--SSGSIIKQSPKPGDGNDKAADGPSVGP-RGIYNGHEDTVEDVTFCPSS 103
+ +AG S Q D + D S+ I N H V D+ F P+
Sbjct: 181 GRGQLKFTAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNK 240
Query: 104 AQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163
S GDD + WD R T PV +E+ H + V +N D L+LTGS+D+ V +
Sbjct: 241 QYYLASCGDDCKVKFWDTRNVTEPVKTLEE-HSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299
Query: 164 FDRRNLTSNGVG 175
+ +++S G
Sbjct: 300 SNMVSISSEPFG 311
Score = 48 (22.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI 212
I +E H +V V W+ +F S + DG L I
Sbjct: 339 IATYEEHEDSVYAVDWASADPWLFASLSYDGRLVI 373
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/226 (26%), Positives = 94/226 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 101 LKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 159
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q +
Sbjct: 160 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQILTA 213
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
GD +C LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 214 SGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 270
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G + FE H + V V++ P F S ++D ++D
Sbjct: 271 ------GQCVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYD 309
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 58/226 (25%), Positives = 94/226 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 59 LKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 117
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q +
Sbjct: 118 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQILTA 171
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
GD +C LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 172 SGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 228
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G + FE H + + V++ P F S ++D ++D
Sbjct: 229 ------GQCVQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYD 267
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 136 (52.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 44/155 (28%), Positives = 69/155 (44%)
Query: 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146
Y GH V DV F P F S D LW ++ ++V H +D+ CV ++P
Sbjct: 488 YRGHVYPVWDVRFAPHGYY-FVSCSYDKTARLW--ATDSNQALRVFVGHLSDVDCVQFHP 544
Query: 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206
+ N + TGS+D +VR++D N+T G + GH +V + +S + S +
Sbjct: 545 -NSNYVATGSSDRTVRLWD--NMT----GQSVRLMTGHKGSVSSLAFSACGRYLASGSVD 597
Query: 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241
++ IWD G V R T+ + F G
Sbjct: 598 HNII-IWDLSN-GSLVTTLLRHTSTVTTITFSRDG 630
Score = 45 (20.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSI 38
L GH + A P +LS +D ++ LWS+
Sbjct: 446 LMGHTGPV-YRCAFAPEMNLLLSCSEDSTIRLWSL 479
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/137 (28%), Positives = 62/137 (45%)
Query: 79 PSVG--PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 136
PSV P+ GH+ V V F P + S D + LW+ G + V + H
Sbjct: 346 PSVSKQPKKRLTGHQQLVNHVYFSPDG-KWIASASFDKSVRLWNGITGQ--FVTVFRGHV 402
Query: 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 196
++ V W+ D L+L+GS D+++++++ R GH+ V V WSPD
Sbjct: 403 GPVYQVSWSA-DSRLLLSGSKDSTLKIWEIRTKKLK------QDLPGHADEVFAVDWSPD 455
Query: 197 KSSVFGSSAEDGLLNIW 213
V S +D +L +W
Sbjct: 456 GEKVV-SGGKDRVLKLW 471
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 103 SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162
S + S DD + LW+ V P ++ H ++ V ++P D I + S D SVR
Sbjct: 328 SPERLVSGSDDFTMFLWEPSVSKQPKKRLT-GHQQLVNHVYFSP-DGKWIASASFDKSVR 385
Query: 163 MFDRRNLTSNGV-GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221
++ NG+ G + F GH V V WS D S + S ++D L IW+ KK
Sbjct: 386 LW-------NGITGQFVTVFRGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRT--KK 435
Query: 222 VEQ 224
++Q
Sbjct: 436 LKQ 438
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 52/185 (28%), Positives = 84/185 (45%)
Query: 70 DGNDKAADGPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
+G+ K V P+ GH ++V V + +S + D L +WD +
Sbjct: 230 EGSSKRMKESGVRTPKITLQGHRESVSAVQWMDAST--LLTGSWDHTLKVWDLSLEG--- 284
Query: 129 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAA 187
IK E + + + ++ L+ LILT SAD ++R++D R T+ G S + N + GH+A
Sbjct: 285 IKTEISTNKSIFDASYSKLN-RLILTASADKNLRLYDPR--TNQG--SVVRNTYLGHNAW 339
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
V V WS + +F S A D +WD + P+ Y GH +KV+
Sbjct: 340 VQTVMWSTTEEFLFVSGAYDNQNKLWDC--------RSPKAPLYDL------LGHGEKVL 385
Query: 248 DFHWN 252
D W+
Sbjct: 386 DIDWS 390
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 40/150 (26%), Positives = 65/150 (43%)
Query: 88 NGHEDTVEDVTFCPSSAQ--EFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVD 143
+GH ++ V + + F S D +LW VG++ V + V K H+ + V
Sbjct: 142 SGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVS 201
Query: 144 WNPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQW 193
+P D TGS D ++++ + + +GV +P +GH +V VQW
Sbjct: 202 VSP-DGLRFATGSWDTMLKVWSAEVEDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 194 SPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
D S++ S D L +WD G K E
Sbjct: 261 M-DASTLLTGSW-DHTLKVWDLSLEGIKTE 288
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 14 ALAMCPTEPY-VLSGGKDKSVVLWSIQ-DHITSSA---TDPATAKSAGSSGSIIKQSPKP 68
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNTSCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 129 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 241
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 14 ALAMCPTEPY-VLSGGKDKSVVLWSIQ-DHITSSA---TDPATAKSAGSSGSIIKQSPKP 68
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNTSCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 129 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 241
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 14 ALAMCPTEPY-VLSGGKDKSVVLWSIQ-DHITSSA---TDPATAKSAGSSGSIIKQSPKP 68
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNTSCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 129 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 241
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 53/235 (22%), Positives = 100/235 (42%)
Query: 14 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 68
AL +CP + +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 235 ALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVF-SASP 293
Query: 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 294 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 351
Query: 129 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 352 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 403
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 241
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 404 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 456
>WB|WBGene00018893 [details] [associations]
symbol:tag-345 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005654 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035
GO:GO:0040019 GO:GO:0070545 GO:GO:0000463 GO:GO:0007276
InterPro:IPR012972 Pfam:PF08154 EMBL:FO081477 KO:K14863
HAMAP:MF_03029 GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844
PIR:T29587 RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 48/173 (27%), Positives = 75/173 (43%)
Query: 1 MEILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAG-- 56
M + GH+D A+ CP + S D ++V W ++ S P + S
Sbjct: 272 MVTIGGHRDKVS-AVEWCPWNSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSFTSIDLH 330
Query: 57 -SSGSIIKQSPK--PGDGNDKAADGPSVGPRGIYNGHEDT-VEDVTFCPSSAQEFCSVGD 112
S +I P + K DG V + + GH++ VE V + P +F SV
Sbjct: 331 PKSDLLISSCTDAIPRLYDPKNRDGSMV--KQSFIGHQNGWVEAVKWNPLDTNQFVSVST 388
Query: 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165
D +WD R S + + HD + C WN + LI TGSAD ++++F+
Sbjct: 389 DKTAKMWDVRSSKSSLFDIH-GHDDRILCATWN---EGLIATGSADCTIKIFE 437
Score = 131 (51.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 54/215 (25%), Positives = 92/215 (42%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
IL GH+ E +++ +SG D ++ +W++ A+D AT
Sbjct: 206 ILRGHERAVE-CVSVNSDSTRAISGSVDTNLKIWNLD------ASDEATTYEKEEE---- 254
Query: 63 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122
++S K + P V GH D V V +CP ++ S D ++ WD
Sbjct: 255 EESAKKRRKKETKTKVPMV----TIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLE 310
Query: 123 V-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK- 180
+ G IK K+ + +D +P D L+++ D R++D +N GS + +
Sbjct: 311 LAGEISRIKGPKSFTS----IDLHPKSD-LLISSCTDAIPRLYDPKNRD----GSMVKQS 361
Query: 181 FEGHSAA-VLCVQWSPDKSSVFGSSAEDGLLNIWD 214
F GH V V+W+P ++ F S + D +WD
Sbjct: 362 FIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWD 396
>UNIPROTKB|P91343 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6239 "Caenorhabditis elegans" [GO:0070545 "PeBoW complex"
evidence=ISS] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0005654
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040019
GO:GO:0070545 GO:GO:0000463 GO:GO:0007276 InterPro:IPR012972
Pfam:PF08154 EMBL:FO081477 KO:K14863 HAMAP:MF_03029
GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844 PIR:T29587
RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 48/173 (27%), Positives = 75/173 (43%)
Query: 1 MEILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAG-- 56
M + GH+D A+ CP + S D ++V W ++ S P + S
Sbjct: 272 MVTIGGHRDKVS-AVEWCPWNSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSFTSIDLH 330
Query: 57 -SSGSIIKQSPK--PGDGNDKAADGPSVGPRGIYNGHEDT-VEDVTFCPSSAQEFCSVGD 112
S +I P + K DG V + + GH++ VE V + P +F SV
Sbjct: 331 PKSDLLISSCTDAIPRLYDPKNRDGSMV--KQSFIGHQNGWVEAVKWNPLDTNQFVSVST 388
Query: 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165
D +WD R S + + HD + C WN + LI TGSAD ++++F+
Sbjct: 389 DKTAKMWDVRSSKSSLFDIH-GHDDRILCATWN---EGLIATGSADCTIKIFE 437
Score = 131 (51.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 54/215 (25%), Positives = 92/215 (42%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
IL GH+ E +++ +SG D ++ +W++ A+D AT
Sbjct: 206 ILRGHERAVE-CVSVNSDSTRAISGSVDTNLKIWNLD------ASDEATTYEKEEE---- 254
Query: 63 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122
++S K + P V GH D V V +CP ++ S D ++ WD
Sbjct: 255 EESAKKRRKKETKTKVPMV----TIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLE 310
Query: 123 V-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK- 180
+ G IK K+ + +D +P D L+++ D R++D +N GS + +
Sbjct: 311 LAGEISRIKGPKSFTS----IDLHPKSD-LLISSCTDAIPRLYDPKNRD----GSMVKQS 361
Query: 181 FEGHSAA-VLCVQWSPDKSSVFGSSAEDGLLNIWD 214
F GH V V+W+P ++ F S + D +WD
Sbjct: 362 FIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWD 396
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 48/166 (28%), Positives = 71/166 (42%)
Query: 53 KSAGSSGSIIKQSPKPGDGN-----DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEF 107
K+A G I+++ D D DG R I GH+ V VTF P +
Sbjct: 372 KAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMI--GHQKQVNHVTFSPDGSM-I 428
Query: 108 CSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167
S G D+ LW+AR G I + H A ++ ++ D L++T S D ++++++ R
Sbjct: 429 ASAGWDNATKLWNARDGK--FINTLRGHVAPVYQCSFSA-DSRLLVTASKDTTLKVWNVR 485
Query: 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213
G GH V V WSPD V GS D + +W
Sbjct: 486 T------GKLATDLPGHEDEVYGVDWSPDGQRV-GSGGRDKAVRLW 524
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 194
H + C ++P + TGS DN+ R++D G+P + +GH+ VL V WS
Sbjct: 151 HGEPILCAQFSPASSARLATGSGDNTARIWDAET------GTPKHTLKGHAGWVLGVSWS 204
Query: 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKV 222
PD + + + + D + IWD E GK+V
Sbjct: 205 PDGTRL-ATCSMDKTVRIWDPE-TGKQV 230
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH + + F P+S+ + D+ +WDA GT P + K H + V W+P D
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGT-PKHTL-KGHAGWVLGVSWSP-D 206
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-----DKSSVFGS 203
+ T S D +VR++D T VGS + +GH+ V + W P D + S
Sbjct: 207 GTRLATCSMDKTVRIWDPE--TGKQVGSEL---KGHAKWVQGIAWEPLHLWRDGTPRLVS 261
Query: 204 SAEDGLLNIW 213
+++D IW
Sbjct: 262 ASKDFTARIW 271
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/226 (25%), Positives = 94/226 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 101 LKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 159
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q +
Sbjct: 160 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQILTA 213
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
GD +C LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 214 SGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 270
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G + FE H + + V++ P F S ++D ++D
Sbjct: 271 ------GQCVQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYD 309
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+ H + V D+ F P+ ++ F + GDDS + +W+ G + H ++ DW+P
Sbjct: 215 SAHANGVRDIAFSPNDSK-FLTCGDDSAIKIWNFNNGKEE--RTLSGHHWEVKSADWHP- 270
Query: 148 DDNLILTGSADNSVRMFDRRNL----TSNGVGSPINK--FEGHSAAVLCVQWSPDKSS-V 200
+ LI++GS DN V+++D R+ T +G +NK F+ + A L S D+S +
Sbjct: 271 NLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRI 330
Query: 201 FGSSAEDGLLNIWDYE 216
F +L I D E
Sbjct: 331 FDLRTMKDMLVIRDSE 346
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
+ H + V D+ F P+ ++ F + GDDS + +W+ G + H ++ DW+P
Sbjct: 215 SAHANGVRDIAFSPNDSK-FLTCGDDSAIKIWNFNNGKEE--RTLSGHHWEVKSADWHP- 270
Query: 148 DDNLILTGSADNSVRMFDRRNL----TSNGVGSPINK--FEGHSAAVLCVQWSPDKSS-V 200
+ LI++GS DN V+++D R+ T +G +NK F+ + A L S D+S +
Sbjct: 271 NLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRI 330
Query: 201 FGSSAEDGLLNIWDYE 216
F +L I D E
Sbjct: 331 FDLRTMKDMLVIRDSE 346
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 104 (41.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+++ I +GS D+ V ++ +R+ PI + GH+ V CV W+P S+ S+++D
Sbjct: 435 NEDFIASGSEDHKVYIWHKRSEL------PIAELTGHTRTVNCVSWNPQIPSMMASASDD 488
Query: 208 GLLNIW 213
G + IW
Sbjct: 489 GTVRIW 494
Score = 76 (31.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPL 147
GH V + + P + G D C LW V T + K+ ++H+ L V WNP
Sbjct: 252 GHAYGVSYIAWSPDD-NYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP- 309
Query: 148 DDNLILTG 155
D +TG
Sbjct: 310 DGKRFVTG 317
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 104 (41.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207
+++ I +GS D+ V ++ +R+ PI + GH+ V CV W+P S+ S+++D
Sbjct: 435 NEDFIASGSEDHKVYIWHKRSEL------PIAELTGHTRTVNCVSWNPQIPSMMASASDD 488
Query: 208 GLLNIW 213
G + IW
Sbjct: 489 GTVRIW 494
Score = 76 (31.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPL 147
GH V + + P + G D C LW V T + K+ ++H+ L V WNP
Sbjct: 252 GHAYGVSYIAWSPDD-NYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP- 309
Query: 148 DDNLILTG 155
D +TG
Sbjct: 310 DGKRFVTG 317
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 57/226 (25%), Positives = 92/226 (40%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 59 LKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 117
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q+ +
Sbjct: 118 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQQILT 171
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
D LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 172 ASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G I FE H + + V++ P F S ++D ++D
Sbjct: 230 ------GQCIQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYD 268
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 53/219 (24%), Positives = 93/219 (42%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSATDPAT---AKSAGSSG 59
L GH + ++ +E V +G ++ LW +++ I + T + + G
Sbjct: 55 LYGHSSGID-SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
D N K D G Y GH V + F P + S G+D+ + +W
Sbjct: 114 EFFASGSL--DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG-RWVVSGGEDNIVKVW 170
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G ++ K+H+ + +D++P + L+ TGSAD +V+ +D G G P
Sbjct: 171 DLTAGK--LLTEFKSHEGQIQSLDFHP-HEFLLATGSADRTVKFWDLETFELIGSGGP-- 225
Query: 180 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218
+A V C+ ++PD +V E L I+ +E +
Sbjct: 226 ----ETAGVRCLSFNPDGKTVLCGLQES--LKIFSWEPI 258
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 52/208 (25%), Positives = 84/208 (40%)
Query: 24 VLSGGKDKSVVLWSI--QDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81
+++GG+D V LW+I + I S + S S + + G K D
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEA 91
Query: 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAHDADLH 140
GH V F P EF + G D+ L +WD R I K H ++
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFG--EFFASGSLDTNLKIWDIR--KKGCIHTYKGHTRGVN 147
Query: 141 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200
+ + P D +++G DN V+++D LT+ G + +F+ H + + + P + +
Sbjct: 148 VLRFTP-DGRWVVSGGEDNIVKVWD---LTA---GKLLTEFKSHEGQIQSLDFHPHEFLL 200
Query: 201 FGSSAEDGLLNIWDYEKVGKKVEQGPRT 228
SA D + WD E GP T
Sbjct: 201 ATGSA-DRTVKFWDLETFELIGSGGPET 227
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 57/221 (25%), Positives = 92/221 (41%)
Query: 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQS 65
G FAL Y+LS G DK+ ++W D T T SA + + Q+
Sbjct: 448 GQHKGPIFALKWNKCGNYILSAGVDKTTIIW---DASTGQCTQQFAFHSAPAL-DVDWQT 503
Query: 66 PKP--GDGNDKAADGPSVG---PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 120
+ D+ +G P + GH + V + +CP Q S DD L +W
Sbjct: 504 NQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQG-QLLASCSDDMTLKIWS 562
Query: 121 ARVGTSPVIKVEKAHDADLHCVDWNPL-------DDNLIL-TGSADNSVRMFDRRNLTSN 172
+ +AH +++ + W+P + NLIL + S D++VR++D
Sbjct: 563 --MNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVER---- 616
Query: 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213
GS I+ H+ V V +SPD + S + D ++IW
Sbjct: 617 --GSCIHTLTKHTEPVYSVAFSPDGKHL-ASGSFDKCVHIW 654
Score = 126 (49.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 59/231 (25%), Positives = 87/231 (37%)
Query: 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 62
+L GH+ F A P+ + SG D + +W + D T+S + + G
Sbjct: 350 VLRGHESEV-FICAWNPSRDLLASGSGDSTARIWDMSDANTNS--NQLVLRHCIQKGGAE 406
Query: 63 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVE-DVTFCPSSAQE----F------C--- 108
S K D DG S+ G Y+G+ + D + Q F C
Sbjct: 407 VPSNKDVTSLDWNCDG-SLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNY 465
Query: 109 --SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166
S G D I+WDA G + H A VDW T A S R
Sbjct: 466 ILSAGVDKTTIIWDASTGQCT--QQFAFHSAPALDVDWQ--------TNQAFASCSTDQR 515
Query: 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
++ GV PI F+GH+ V ++W P + + S ++D L IW +
Sbjct: 516 IHVCRLGVNEPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNR 565
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145
++ GH V + P +F S D + +W +SP +E H+ ++C+D+
Sbjct: 137 VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-SSSPNFTLE-GHEKGVNCIDYY 194
Query: 146 PLDDN-LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204
D +++G+ D V+++D +N T + EGH+ V CV + P+ + S
Sbjct: 195 SGGDKPYLISGADDRLVKIWDYQNKTC------VQTLEGHAQNVSCVSFHPELPIIITGS 248
Query: 205 AEDGLLNIW 213
EDG + IW
Sbjct: 249 -EDGTVRIW 256
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 55/221 (24%), Positives = 95/221 (42%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSATD-PA-TAKSAGSS 58
LT D + ++ + PTEP++L+ + SV +W+ + T D P AK
Sbjct: 11 LTARSDRVK-SVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 59 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI- 117
++ + D + + ++ ++ H D + + P+ Q F D LI
Sbjct: 70 NWVVTGAD---DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPT--QPFILTSSDDMLIK 124
Query: 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177
LWD S +V + H + + NP D+N + S D +++++ G SP
Sbjct: 125 LWDWDKKWS-CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL------GSSSP 177
Query: 178 INKFEGHSAAVLCVQW--SPDKSSVFGSSAEDGLLNIWDYE 216
EGH V C+ + DK + S A+D L+ IWDY+
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDKPYLI-SGADDRLVKIWDYQ 217
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 135 (52.6 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 56/216 (25%), Positives = 94/216 (43%)
Query: 45 SATDPATAKSAGSSGSIIKQ-SPKPGDGNDKAADGPSVGPRGI------YNGHEDTVEDV 97
S + AT + GS +++K S D AA G+ GH +++ V
Sbjct: 202 SVSPDATRFATGSWDTMLKVWSAAEDDAGGDAASSKRPKENGVRTPIMTLQGHRESISAV 261
Query: 98 TFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157
+ +S + D + +WD + IK E + + + ++ L+ LI+T SA
Sbjct: 262 QWIDTST--LLTTSWDHTMKIWDLSLEG---IKTEISTNKSIFDASYSNLN-RLIVTASA 315
Query: 158 DNSVRMFDRRNLTSNGVGSPI-NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216
D ++R++D R T+ G S + N + GH+A V V WS + +F S A D +WD
Sbjct: 316 DKNLRLYDPR--TNQG--SIVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDC- 370
Query: 217 KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252
+ P+ Y GH +KV+D W+
Sbjct: 371 -------RSPKAPLYDL------LGHGEKVLDIDWS 393
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 25 LSGGKDKSVVLWSIQDHITSSATD 48
+S +D++V+LW Q ++ S+A +
Sbjct: 165 VSSSQDQTVMLW--QWNVDSNAVE 186
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 57/226 (25%), Positives = 92/226 (40%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 101 LKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 159
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q+ +
Sbjct: 160 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQQILT 213
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
D LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 214 ASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 271
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G I FE H + + V++ P F S ++D ++D
Sbjct: 272 ------GQCIQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYD 310
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 52/227 (22%), Positives = 105/227 (46%)
Query: 36 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 92
W +Q+ I + +++ ++ S+G ++ G+D + SV P + + GH
Sbjct: 11 WKLQE-IVAHSSNVSSLVLGKSTGRLLATG-----GDDCRVNVWSVNKPNCVMSLTGHTT 64
Query: 93 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151
+E + S+ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PIESLQI--SAKEELIVAGSQSGSIRVWDLEA--AKILRTLLGHKANICSLDFHPYG-SF 119
Query: 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211
+ +GS D ++++D R G I K++ H+ AV C+++SPD S+A+D +
Sbjct: 120 VASGSLDTDIKLWDVRR---KGC---IFKYKSHTQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 212 IWDYEKVGKKV-----EQGP-RTTNYPAGLFFQHAGHRDKVVDFHWN 252
+WD GK + GP + + +G D+ + F W+
Sbjct: 173 LWDLT-AGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRF-WD 217
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 51/222 (22%), Positives = 98/222 (44%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAG 56
++ + H N + T + +GG D V +WS+ + + S T P +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 57 SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 115
+ +I + G+ + D + GH+ + + F P + F + G D+
Sbjct: 73 AKEELIVAGSQ--SGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS--FVASGSLDTD 128
Query: 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175
+ LWD R + K K+H + C+ ++P D + + + D++V+++D LT+ G
Sbjct: 129 IKLWDVR-RKGCIFKY-KSHTQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---G 179
Query: 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
+ +F GHS V V++ P + + S + D + WD EK
Sbjct: 180 KVMFEFTGHSGPVNVVEFHPSEY-LLASGSSDRTIRFWDLEK 220
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 52/218 (23%), Positives = 92/218 (42%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAKSAGSS--G 59
LTGH E +L + E +++G + S+ +W ++ + + A S G
Sbjct: 59 LTGHTTPIE-SLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG 117
Query: 60 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119
S + D + K D G Y H V + F P + S DD + LW
Sbjct: 118 SFVASGSL--DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDG-KWLASAADDHTVKLW 174
Query: 120 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 179
D G V+ H ++ V+++P + L+ +GS+D ++R +D L V S I
Sbjct: 175 DLTAGK--VMFEFTGHSGPVNVVEFHP-SEYLLASGSSDRTIRFWD---LEKFHVVSCI- 227
Query: 180 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217
E + V C+ ++PD ++G + + W+ E+
Sbjct: 228 --EEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPER 263
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 58/226 (25%), Positives = 94/226 (41%)
Query: 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPAT---AKSAGSSG 59
L GH N + C + ++S +D V++W S + + T P T A + SG
Sbjct: 59 LKGH-GNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG 117
Query: 60 SII-------KQS--PKPGDGNDK-AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCS 109
I K S P D N+ AA SV H + + +F S Q +
Sbjct: 118 CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM------HTNYLSACSFTNSDMQILTA 171
Query: 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRN 168
GD +C LWD G +++ H AD+ C+D P + N ++G D ++D R+
Sbjct: 172 SGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 228
Query: 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214
G + FE H + + V++ P F S ++D ++D
Sbjct: 229 ------GQCVQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYD 267
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 53/205 (25%), Positives = 87/205 (42%)
Query: 24 VLSGGKDKSVVLWSIQDHI---TSSATDPATAKSAGSSGSIIKQSP-KPGDGNDKAADGP 79
+ + KD++V +W D I T S A S+ +++ P P D++
Sbjct: 265 IYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPV--KDRSKSHL 322
Query: 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL 139
S+ + + V CP + S DD+ L LW R + ++ H +
Sbjct: 323 SLSTEELQESALKRYQAV--CPDEVESLVSCSDDNTLYLW--RNNQNKCVERMTGHQNVV 378
Query: 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 199
+ V ++P D LI + S D SVR++ + G + F GH AV V WS D S
Sbjct: 379 NDVKYSP-DVKLIASASFDKSVRLWRASD------GQYMATFRGHVQAVYTVAWSAD-SR 430
Query: 200 VFGSSAEDGLLNIWDYEKVGKKVEQ 224
+ S ++D L +W + KK+ Q
Sbjct: 431 LIVSGSKDSTLKVWSVQT--KKLAQ 453
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148
GH++ V DV + P + S D + LW A G + + H ++ V W+ D
Sbjct: 373 GHQNVVNDVKYSPD-VKLIASASFDKSVRLWRASDGQ--YMATFRGHVQAVYTVAWSA-D 428
Query: 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208
LI++GS D++++++ ++ + + + GH+ V V W+PD S V S +D
Sbjct: 429 SRLIVSGSKDSTLKVW---SVQTKKLAQEL---PGHADEVFGVDWAPDGSRV-ASGGKDK 481
Query: 209 LLNIWDY 215
++ +W Y
Sbjct: 482 VIKLWAY 488
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 52/185 (28%), Positives = 83/185 (44%)
Query: 70 DGNDKAADGPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 128
+G+ K V P+ GH ++V V + A + D L +WD +
Sbjct: 230 EGSSKRMKESGVRTPKITLQGHRESVSAVQWM--DATTLLTGSWDHTLKVWDLSLEG--- 284
Query: 129 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAA 187
IK E + + + ++ L+ LILT SAD ++R++D R T+ G S + N + GH+A
Sbjct: 285 IKTEISTNKSIFDASYSKLN-RLILTASADKNLRLYDPR--TNQG--SVVRNTYLGHNAW 339
Query: 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247
V V WS + +F S A D +WD + P+ Y GH +KV+
Sbjct: 340 VQTVMWSTTEEFLFVSGAYDNQNKLWDC--------RSPKAPLYDL------LGHGEKVL 385
Query: 248 DFHWN 252
D W+
Sbjct: 386 DIDWS 390
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 88 NGHEDTVEDVTFCPSSAQ--EFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVD 143
+GH ++ V + + F S D +LW VG++ V + V K H+ + V
Sbjct: 142 SGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVS 201
Query: 144 WNPLDDNLILTGSADNSVRMFDR----------RNLTSNGVGSPINKFEGHSAAVLCVQW 193
+P D TGS D ++++ + + +GV +P +GH +V VQW
Sbjct: 202 VSP-DGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 194 SPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223
+ + GS D L +WD G K E
Sbjct: 261 MDATTLLTGSW--DHTLKVWDLSLEGIKTE 288
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147
N V DVT+ P+ F + + + + L D R + + HD ++ +N
Sbjct: 248 NSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFN-Y 306
Query: 148 DDNLILTGSADNSVRM--FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205
++LIL SAD++ R+ +D RN+ SPI E H +V ++WSP+ +V ++
Sbjct: 307 KNSLILA-SADSNGRLNLWDIRNMNK----SPIATME-HGTSVSTLEWSPNFDTVLATAG 360
Query: 206 -EDGLLNIWD 214
EDGL+ +WD
Sbjct: 361 QEDGLVKLWD 370
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 69 GDGNDKAAD-GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP 127
GDG P++ I HE V DV F P+ ++ F + DD L +W+ + T
Sbjct: 141 GDGGGMVKYFEPNLNNVKIVQAHEMEVRDVAFSPNDSK-FVTASDDGSLKVWNFHMSTEE 199
Query: 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187
+K+ H D+ VDW+P L+ +GS DN V+ +D R G+ I GH
Sbjct: 200 -LKLT-GHGWDVKTVDWHP-SKGLLASGSKDNLVKFWDPRT------GTCIATLHGHKNT 250
Query: 188 VLCVQWSPD-KSSVFGSSAEDGLLNIWD 214
++ + + S+ + + D ++D
Sbjct: 251 IMQASFQKNFGSNYLATVSRDSTCRVFD 278
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 43/171 (25%), Positives = 77/171 (45%)
Query: 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW----SIQD-HITSSATDPATAKSA 55
++I+ H+ +A P + ++ D S+ +W S ++ +T D T
Sbjct: 157 VKIVQAHEMEVR-DVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWH 215
Query: 56 GSSGSIIKQSPKPGDGNDKAADGPSVGPR-GIYNGHEDTVEDVTFCPSSAQEF-CSVGDD 113
S G + S D K D P G +GH++T+ +F + + +V D
Sbjct: 216 PSKGLLASGSK---DNLVKFWD-PRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRD 271
Query: 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164
S ++D R ++V + H+ D++CV W+PL NL+ TG +D SV +
Sbjct: 272 STCRVFDLRAMKD--VRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHY 320
WARNING: HSPs involving 395 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 309 292 0.00090 115 3 11 23 0.43 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 645
No. of states in DFA: 618 (66 KB)
Total size of DFA: 244 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.69u 0.21s 25.90t Elapsed: 00:00:01
Total cpu time: 25.74u 0.21s 25.95t Elapsed: 00:00:01
Start: Fri May 10 05:27:18 2013 End: Fri May 10 05:27:19 2013
WARNINGS ISSUED: 2