Query 021657
Match_columns 309
No_of_seqs 468 out of 1508
Neff 12.0
Searched_HMMs 46136
Date Fri Mar 29 04:40:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021657.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021657hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0272 U4/U6 small nuclear ri 100.0 2.9E-47 6.2E-52 287.0 17.3 263 7-309 174-440 (459)
2 KOG0271 Notchless-like WD40 re 100.0 1.4E-46 3E-51 280.3 20.2 269 1-309 150-461 (480)
3 KOG0271 Notchless-like WD40 re 100.0 3.9E-44 8.5E-49 267.3 21.3 229 3-309 110-377 (480)
4 KOG0286 G-protein beta subunit 100.0 1.9E-43 4.1E-48 254.7 23.3 267 2-309 49-325 (343)
5 KOG0272 U4/U6 small nuclear ri 100.0 2.1E-44 4.5E-49 271.6 18.5 245 1-279 210-458 (459)
6 KOG0263 Transcription initiati 100.0 1.9E-43 4.1E-48 285.6 20.3 208 2-284 445-652 (707)
7 KOG0279 G protein beta subunit 100.0 9.1E-42 2E-46 244.5 23.8 231 2-309 9-243 (315)
8 KOG0284 Polyadenylation factor 100.0 5E-42 1.1E-46 257.8 14.4 226 3-309 133-360 (464)
9 KOG0279 G protein beta subunit 100.0 1.4E-39 3E-44 233.3 23.1 214 1-296 56-271 (315)
10 KOG0263 Transcription initiati 100.0 4.4E-40 9.5E-45 266.2 21.6 250 11-309 380-629 (707)
11 KOG0265 U5 snRNP-specific prot 100.0 3.3E-39 7.1E-44 233.7 20.8 235 2-309 41-318 (338)
12 KOG0284 Polyadenylation factor 100.0 3.3E-40 7.3E-45 248.0 16.1 218 11-309 98-316 (464)
13 KOG0295 WD40 repeat-containing 100.0 4.4E-39 9.4E-44 238.7 20.1 265 2-308 102-385 (406)
14 KOG0277 Peroxisomal targeting 100.0 6E-39 1.3E-43 227.3 19.9 226 11-309 62-288 (311)
15 KOG0316 Conserved WD40 repeat- 100.0 1.1E-38 2.4E-43 223.6 20.3 266 1-309 10-280 (307)
16 KOG0285 Pleiotropic regulator 100.0 6.7E-39 1.5E-43 237.5 18.5 224 2-307 145-368 (460)
17 KOG0264 Nucleosome remodeling 100.0 1.5E-38 3.2E-43 242.2 20.4 238 3-287 172-410 (422)
18 KOG0315 G-protein beta subunit 100.0 6.4E-38 1.4E-42 221.5 22.1 234 1-308 76-309 (311)
19 KOG0645 WD40 repeat protein [G 100.0 7.8E-37 1.7E-41 218.4 27.2 252 1-309 7-290 (312)
20 KOG0319 WD40-repeat-containing 100.0 8.3E-38 1.8E-42 251.2 21.0 234 2-309 359-599 (775)
21 KOG0273 Beta-transducin family 100.0 4.1E-37 8.9E-42 235.4 22.2 218 11-309 237-462 (524)
22 KOG0266 WD40 repeat-containing 100.0 1.2E-36 2.6E-41 250.7 25.2 228 2-309 197-432 (456)
23 KOG0286 G-protein beta subunit 100.0 1.1E-36 2.3E-41 220.0 21.6 235 11-279 99-343 (343)
24 KOG0282 mRNA splicing factor [ 100.0 5.8E-38 1.3E-42 240.7 15.9 243 2-309 208-484 (503)
25 KOG0276 Vesicle coat complex C 100.0 4.1E-37 8.8E-42 243.3 20.9 268 2-308 7-278 (794)
26 KOG0273 Beta-transducin family 100.0 3.5E-36 7.5E-41 230.4 22.5 245 2-281 270-523 (524)
27 KOG0315 G-protein beta subunit 100.0 6.8E-36 1.5E-40 211.3 21.9 229 7-308 38-267 (311)
28 KOG0295 WD40 repeat-containing 100.0 3.8E-36 8.2E-41 223.2 18.1 245 2-280 144-405 (406)
29 KOG0266 WD40 repeat-containing 100.0 3.9E-35 8.4E-40 241.8 25.6 225 3-302 153-379 (456)
30 PTZ00421 coronin; Provisional 100.0 1.3E-34 2.9E-39 237.7 27.8 237 3-309 70-313 (493)
31 cd00200 WD40 WD40 domain, foun 100.0 1.1E-34 2.4E-39 227.9 26.1 266 1-309 2-271 (289)
32 KOG0281 Beta-TrCP (transducin 100.0 6.6E-36 1.4E-40 221.2 14.9 254 11-308 199-458 (499)
33 KOG0292 Vesicle coat complex C 100.0 9.8E-35 2.1E-39 238.3 21.8 235 2-309 45-302 (1202)
34 PLN00181 protein SPA1-RELATED; 100.0 9.2E-34 2E-38 249.9 29.2 278 4-309 479-773 (793)
35 KOG0318 WD40 repeat stress pro 100.0 2E-33 4.3E-38 218.2 25.2 279 2-306 53-370 (603)
36 KOG0277 Peroxisomal targeting 100.0 6.1E-35 1.3E-39 207.0 15.1 211 1-280 97-308 (311)
37 KOG0772 Uncharacterized conser 100.0 3.2E-34 7E-39 222.1 20.1 278 3-309 162-467 (641)
38 KOG0313 Microtubule binding pr 100.0 3.9E-34 8.4E-39 213.6 19.7 264 7-308 104-398 (423)
39 KOG1446 Histone H3 (Lys4) meth 100.0 4.4E-33 9.6E-38 203.6 24.8 266 3-309 9-285 (311)
40 KOG0283 WD40 repeat-containing 100.0 7.4E-34 1.6E-38 232.0 23.0 264 2-299 260-544 (712)
41 PTZ00420 coronin; Provisional 100.0 4.8E-33 1E-37 229.7 27.6 239 2-309 68-316 (568)
42 KOG0645 WD40 repeat protein [G 100.0 3.8E-33 8.2E-38 199.6 22.5 225 5-281 58-311 (312)
43 KOG0264 Nucleosome remodeling 100.0 7.1E-34 1.5E-38 216.8 19.1 248 6-309 122-383 (422)
44 KOG0292 Vesicle coat complex C 100.0 8.2E-34 1.8E-38 232.9 20.3 242 4-309 5-260 (1202)
45 KOG0293 WD40 repeat-containing 100.0 1.2E-33 2.6E-38 213.4 19.2 245 2-309 218-492 (519)
46 KOG0318 WD40 repeat stress pro 100.0 6.1E-33 1.3E-37 215.5 23.4 265 6-308 233-582 (603)
47 KOG0296 Angio-associated migra 100.0 1.5E-33 3.2E-38 209.5 19.2 266 1-309 57-378 (399)
48 KOG1407 WD40 repeat protein [F 100.0 3.4E-33 7.3E-38 198.9 19.1 234 2-309 14-282 (313)
49 KOG0310 Conserved WD40 repeat- 100.0 4E-33 8.6E-38 214.5 19.8 225 5-309 65-289 (487)
50 KOG0313 Microtubule binding pr 100.0 9.6E-33 2.1E-37 206.2 19.9 231 3-281 188-418 (423)
51 KOG0281 Beta-TrCP (transducin 100.0 5.6E-34 1.2E-38 211.1 13.0 200 64-308 210-409 (499)
52 KOG0265 U5 snRNP-specific prot 100.0 2.2E-32 4.8E-37 198.4 21.0 244 3-278 85-335 (338)
53 KOG0291 WD40-repeat-containing 100.0 3.6E-32 7.8E-37 219.7 24.1 259 10-309 266-530 (893)
54 KOG0291 WD40-repeat-containing 100.0 1.4E-32 3.1E-37 222.0 21.3 207 3-284 345-553 (893)
55 KOG0306 WD40-repeat-containing 100.0 9.5E-33 2.1E-37 222.9 19.8 267 3-309 368-644 (888)
56 KOG0319 WD40-repeat-containing 100.0 1.1E-32 2.5E-37 221.8 20.0 214 2-281 405-619 (775)
57 KOG0285 Pleiotropic regulator 100.0 3.9E-33 8.4E-38 207.1 16.0 188 82-309 142-329 (460)
58 KOG0296 Angio-associated migra 100.0 1.7E-32 3.7E-37 203.9 18.0 244 2-281 100-398 (399)
59 KOG0282 mRNA splicing factor [ 100.0 2.7E-33 5.8E-38 215.2 14.2 248 1-279 251-503 (503)
60 KOG0305 Anaphase promoting com 100.0 9.5E-32 2.1E-36 213.9 19.8 241 8-282 217-462 (484)
61 KOG0640 mRNA cleavage stimulat 100.0 1.7E-32 3.6E-37 200.3 14.2 232 3-296 107-344 (430)
62 KOG0643 Translation initiation 100.0 2.7E-32 5.9E-37 195.0 14.7 259 1-281 45-317 (327)
63 KOG0647 mRNA export protein (c 100.0 5.3E-31 1.1E-35 191.5 21.5 222 10-308 28-302 (347)
64 cd00200 WD40 WD40 domain, foun 100.0 8.6E-31 1.9E-35 205.9 24.3 241 2-279 45-289 (289)
65 KOG0275 Conserved WD40 repeat- 100.0 1.3E-32 2.9E-37 202.3 12.8 242 11-309 215-489 (508)
66 KOG0302 Ribosome Assembly prot 100.0 2.5E-31 5.3E-36 198.7 18.9 221 2-265 205-430 (440)
67 KOG1332 Vesicle coat complex C 100.0 9.7E-32 2.1E-36 189.8 15.4 243 3-309 6-266 (299)
68 KOG0641 WD40 repeat protein [G 100.0 1E-29 2.2E-34 178.1 24.5 245 5-281 86-349 (350)
69 KOG0643 Translation initiation 100.0 1.8E-30 4E-35 185.7 20.4 231 3-309 5-241 (327)
70 PTZ00421 coronin; Provisional 100.0 7.9E-30 1.7E-34 209.7 27.1 216 11-282 22-246 (493)
71 KOG0308 Conserved WD40 repeat- 100.0 8.9E-32 1.9E-36 214.0 15.0 230 14-309 29-265 (735)
72 KOG0269 WD40 repeat-containing 100.0 1.5E-31 3.3E-36 216.5 15.6 227 13-308 91-318 (839)
73 KOG0293 WD40 repeat-containing 100.0 6.7E-31 1.5E-35 198.6 17.6 246 2-282 263-514 (519)
74 KOG0278 Serine/threonine kinas 100.0 6.5E-31 1.4E-35 186.4 16.0 243 2-282 53-298 (334)
75 KOG0300 WD40 repeat-containing 100.0 1.3E-30 2.9E-35 191.2 17.9 264 1-308 183-453 (481)
76 KOG0274 Cdc4 and related F-box 100.0 1.3E-30 2.8E-35 214.6 20.0 244 4-295 245-490 (537)
77 KOG0276 Vesicle coat complex C 100.0 2.1E-30 4.6E-35 205.5 18.7 205 67-309 31-237 (794)
78 KOG0302 Ribosome Assembly prot 100.0 3.6E-30 7.7E-35 192.5 18.7 229 5-282 148-379 (440)
79 KOG2096 WD40 repeat protein [G 100.0 3.7E-29 8E-34 183.5 23.0 280 2-309 80-383 (420)
80 KOG0278 Serine/threonine kinas 100.0 9.3E-31 2E-35 185.6 14.2 263 3-309 9-277 (334)
81 KOG0646 WD40 repeat protein [G 100.0 4E-29 8.7E-34 191.6 24.0 236 11-309 83-329 (476)
82 KOG4283 Transcription-coupled 100.0 1.1E-29 2.4E-34 184.4 18.9 235 5-282 40-277 (397)
83 KOG0288 WD40 repeat protein Ti 100.0 7.2E-31 1.6E-35 198.3 12.8 263 2-309 169-441 (459)
84 KOG0973 Histone transcription 100.0 6.2E-30 1.3E-34 214.5 19.6 250 4-309 8-275 (942)
85 KOG0306 WD40-repeat-containing 100.0 1.5E-29 3.3E-34 204.5 21.0 218 2-282 448-665 (888)
86 KOG0300 WD40 repeat-containing 100.0 4.7E-30 1E-34 188.4 15.3 218 1-296 141-396 (481)
87 KOG0289 mRNA splicing factor [ 100.0 5.2E-29 1.1E-33 189.5 21.3 230 1-307 254-484 (506)
88 PLN00181 protein SPA1-RELATED; 100.0 1.7E-28 3.8E-33 216.6 27.6 223 2-280 569-792 (793)
89 KOG0299 U3 snoRNP-associated p 100.0 6.2E-29 1.3E-33 190.3 19.7 237 5-309 199-435 (479)
90 KOG1036 Mitotic spindle checkp 100.0 1.6E-28 3.5E-33 179.1 20.8 259 11-308 15-283 (323)
91 KOG0269 WD40 repeat-containing 100.0 8.7E-30 1.9E-34 206.4 15.7 212 2-282 127-341 (839)
92 KOG0274 Cdc4 and related F-box 100.0 9.6E-29 2.1E-33 203.7 22.0 218 3-307 202-421 (537)
93 KOG0294 WD40 repeat-containing 100.0 3.1E-28 6.7E-33 178.2 21.7 205 3-282 38-282 (362)
94 KOG0268 Sof1-like rRNA process 100.0 3.1E-29 6.7E-34 186.7 16.7 244 2-282 103-346 (433)
95 KOG0641 WD40 repeat protein [G 100.0 1.3E-27 2.8E-32 167.6 23.8 239 11-309 34-329 (350)
96 KOG0973 Histone transcription 100.0 1.4E-28 2.9E-33 206.5 22.3 247 2-309 63-335 (942)
97 KOG0268 Sof1-like rRNA process 100.0 9.2E-30 2E-34 189.4 12.4 265 1-308 59-324 (433)
98 KOG1332 Vesicle coat complex C 100.0 1.2E-28 2.6E-33 174.3 17.1 217 1-281 49-286 (299)
99 KOG0310 Conserved WD40 repeat- 100.0 1.3E-28 2.9E-33 189.7 18.5 219 11-308 28-247 (487)
100 PTZ00420 coronin; Provisional 100.0 2.6E-27 5.6E-32 195.9 27.0 182 73-282 56-249 (568)
101 KOG0289 mRNA splicing factor [ 100.0 3E-28 6.5E-33 185.4 19.6 218 11-308 221-441 (506)
102 KOG0267 Microtubule severing p 100.0 3.2E-30 7E-35 207.5 8.9 191 79-309 58-248 (825)
103 KOG1274 WD40 repeat protein [G 100.0 1.5E-27 3.3E-32 196.9 24.1 262 5-309 10-280 (933)
104 KOG0283 WD40 repeat-containing 100.0 5.1E-28 1.1E-32 198.1 19.0 206 1-282 362-577 (712)
105 KOG0270 WD40 repeat-containing 100.0 8E-28 1.7E-32 183.5 18.4 210 5-282 240-450 (463)
106 KOG2445 Nuclear pore complex c 100.0 1.1E-26 2.4E-31 169.6 23.2 248 5-308 10-297 (361)
107 KOG0301 Phospholipase A2-activ 100.0 5.8E-28 1.2E-32 193.7 17.9 254 2-307 8-267 (745)
108 KOG0308 Conserved WD40 repeat- 100.0 2.3E-28 4.9E-33 194.7 14.9 211 2-283 67-287 (735)
109 KOG0305 Anaphase promoting com 100.0 1E-27 2.2E-32 191.1 18.5 254 15-309 183-441 (484)
110 KOG1407 WD40 repeat protein [F 100.0 5.4E-27 1.2E-31 167.5 19.0 248 3-281 59-311 (313)
111 KOG0316 Conserved WD40 repeat- 100.0 2.1E-27 4.6E-32 167.2 16.7 195 66-302 34-228 (307)
112 KOG0275 Conserved WD40 repeat- 100.0 5E-28 1.1E-32 178.3 13.8 240 7-279 262-507 (508)
113 KOG0270 WD40 repeat-containing 100.0 2.3E-27 5.1E-32 181.0 17.4 214 21-282 192-405 (463)
114 KOG0640 mRNA cleavage stimulat 100.0 2.9E-27 6.2E-32 173.1 16.8 233 1-309 165-406 (430)
115 KOG0288 WD40 repeat protein Ti 100.0 1.9E-26 4.1E-31 174.5 19.4 239 2-279 213-459 (459)
116 KOG0772 Uncharacterized conser 100.0 3E-27 6.5E-32 183.8 15.5 214 2-281 262-487 (641)
117 KOG0299 U3 snoRNP-associated p 100.0 1.7E-26 3.6E-31 177.1 18.8 221 2-282 136-357 (479)
118 KOG1446 Histone H3 (Lys4) meth 100.0 1.2E-25 2.6E-30 164.9 22.4 204 1-281 93-303 (311)
119 KOG0307 Vesicle coat complex C 99.9 1.8E-27 4E-32 200.8 12.7 231 12-309 67-306 (1049)
120 KOG4328 WD40 protein [Function 99.9 2.4E-26 5.2E-31 176.2 16.9 217 3-281 181-399 (498)
121 KOG0321 WD40 repeat-containing 99.9 8.1E-26 1.7E-30 180.0 20.4 240 3-309 95-370 (720)
122 KOG0267 Microtubule severing p 99.9 1.4E-27 3E-32 192.5 10.6 190 3-259 65-254 (825)
123 KOG0301 Phospholipase A2-activ 99.9 5.3E-26 1.1E-30 182.6 18.5 196 1-282 94-289 (745)
124 KOG0650 WD40 repeat nucleolar 99.9 3.3E-26 7.2E-31 181.0 17.1 272 3-309 395-715 (733)
125 KOG0639 Transducin-like enhanc 99.9 3.6E-26 7.8E-31 177.5 15.9 240 6-308 417-683 (705)
126 KOG1273 WD40 repeat protein [G 99.9 2E-25 4.3E-30 163.8 18.2 226 13-309 27-303 (405)
127 KOG2919 Guanine nucleotide-bin 99.9 5.7E-25 1.2E-29 161.9 20.1 263 12-309 52-350 (406)
128 KOG0290 Conserved WD40 repeat- 99.9 4.1E-25 8.8E-30 160.4 19.0 245 6-309 94-345 (364)
129 KOG2055 WD40 repeat protein [G 99.9 3E-24 6.6E-29 164.9 20.7 229 11-309 215-445 (514)
130 KOG1007 WD repeat protein TSSC 99.9 2E-24 4.3E-29 156.7 18.3 244 3-308 58-339 (370)
131 KOG1007 WD repeat protein TSSC 99.9 2.9E-24 6.2E-29 155.9 18.9 226 6-281 121-361 (370)
132 KOG4378 Nuclear protein COP1 [ 99.9 1.3E-24 2.7E-29 168.7 18.1 260 12-309 37-303 (673)
133 KOG0307 Vesicle coat complex C 99.9 1.5E-25 3.3E-30 189.4 13.7 215 1-283 109-329 (1049)
134 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.6E-23 3.6E-28 166.0 24.6 263 2-309 25-300 (300)
135 KOG0646 WD40 repeat protein [G 99.9 2.9E-24 6.2E-29 165.2 18.3 206 2-259 117-335 (476)
136 KOG2445 Nuclear pore complex c 99.9 8.4E-24 1.8E-28 154.7 17.9 236 4-282 55-319 (361)
137 KOG0303 Actin-binding protein 99.9 1.8E-23 3.9E-28 157.9 19.7 215 3-282 76-295 (472)
138 KOG1408 WD40 repeat protein [F 99.9 6.7E-24 1.4E-28 171.7 18.4 185 90-309 458-693 (1080)
139 KOG1063 RNA polymerase II elon 99.9 1.4E-23 3E-28 168.8 19.8 272 3-309 262-674 (764)
140 KOG0639 Transducin-like enhanc 99.9 4.6E-24 9.9E-29 166.0 15.3 236 9-281 465-704 (705)
141 KOG2048 WD40 repeat protein [G 99.9 5.7E-23 1.2E-27 164.9 21.4 260 10-307 26-299 (691)
142 KOG0290 Conserved WD40 repeat- 99.9 3.7E-23 7.9E-28 150.3 18.4 205 8-264 149-356 (364)
143 KOG1408 WD40 repeat protein [F 99.9 1.6E-23 3.4E-28 169.5 18.0 240 12-282 462-714 (1080)
144 KOG0647 mRNA export protein (c 99.9 5E-23 1.1E-27 150.3 18.8 238 3-266 67-316 (347)
145 KOG0642 Cell-cycle nuclear pro 99.9 5.8E-24 1.3E-28 167.2 15.0 232 3-299 289-573 (577)
146 KOG0294 WD40 repeat-containing 99.9 6.8E-23 1.5E-27 150.4 19.0 191 82-307 34-257 (362)
147 KOG2106 Uncharacterized conser 99.9 4E-23 8.6E-28 160.7 17.5 248 3-280 363-625 (626)
148 KOG2106 Uncharacterized conser 99.9 8.5E-22 1.8E-26 153.4 23.2 278 2-309 98-417 (626)
149 KOG2055 WD40 repeat protein [G 99.9 1.6E-22 3.4E-27 155.6 18.5 245 11-281 259-512 (514)
150 KOG1310 WD40 repeat protein [G 99.9 5.3E-23 1.2E-27 161.7 15.7 232 2-282 44-304 (758)
151 KOG4283 Transcription-coupled 99.9 2.4E-22 5.2E-27 146.5 17.8 248 5-281 98-365 (397)
152 KOG1539 WD repeat protein [Gen 99.9 1.3E-22 2.7E-27 166.6 15.5 265 2-309 328-627 (910)
153 KOG4227 WD40 repeat protein [G 99.9 5.5E-22 1.2E-26 150.2 17.7 178 2-221 50-230 (609)
154 KOG4328 WD40 protein [Function 99.9 1.6E-22 3.5E-27 155.4 15.0 206 76-309 171-379 (498)
155 KOG1445 Tumor-specific antigen 99.9 3.8E-23 8.3E-28 165.4 11.9 123 137-282 628-751 (1012)
156 KOG1009 Chromatin assembly com 99.9 2.7E-22 5.9E-27 151.9 15.6 257 6-309 10-292 (434)
157 KOG2096 WD40 repeat protein [G 99.9 7.3E-22 1.6E-26 145.5 16.7 173 84-281 79-308 (420)
158 KOG0321 WD40 repeat-containing 99.9 1.5E-21 3.2E-26 156.0 19.7 219 15-284 55-304 (720)
159 KOG1539 WD repeat protein [Gen 99.9 1.4E-21 3E-26 160.6 19.2 200 11-282 450-649 (910)
160 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1E-20 2.3E-25 150.0 23.5 254 21-309 1-258 (300)
161 KOG1036 Mitotic spindle checkp 99.9 1E-20 2.2E-25 138.7 20.4 233 6-263 52-294 (323)
162 KOG4378 Nuclear protein COP1 [ 99.9 5.8E-21 1.3E-25 148.6 19.3 191 2-255 115-305 (673)
163 KOG1063 RNA polymerase II elon 99.9 3.8E-21 8.2E-26 155.0 18.5 223 2-281 519-763 (764)
164 KOG1188 WD40 repeat protein [G 99.9 2.3E-21 5E-26 143.9 15.9 176 1-219 63-245 (376)
165 KOG1273 WD40 repeat protein [G 99.9 6.8E-21 1.5E-25 140.2 18.0 251 2-282 59-323 (405)
166 KOG0644 Uncharacterized conser 99.9 6.6E-23 1.4E-27 168.5 8.0 227 2-309 184-448 (1113)
167 KOG1523 Actin-related protein 99.9 2E-20 4.4E-25 137.9 19.4 222 11-282 12-237 (361)
168 KOG1587 Cytoplasmic dynein int 99.9 1.5E-20 3.3E-25 154.5 20.8 219 10-284 243-475 (555)
169 KOG1188 WD40 repeat protein [G 99.9 1.5E-20 3.2E-25 139.7 17.2 197 22-283 41-244 (376)
170 KOG0322 G-protein beta subunit 99.9 4.5E-21 9.7E-26 137.7 13.7 163 91-280 150-322 (323)
171 KOG1538 Uncharacterized conser 99.9 1.7E-20 3.7E-25 151.3 18.2 244 1-282 46-294 (1081)
172 KOG1334 WD40 repeat protein [G 99.9 3.3E-20 7.2E-25 144.0 18.9 289 2-309 136-446 (559)
173 KOG0649 WD40 repeat protein [G 99.9 2.5E-20 5.5E-25 132.5 16.7 213 11-282 12-236 (325)
174 KOG1445 Tumor-specific antigen 99.9 7.1E-21 1.5E-25 152.6 14.2 213 9-282 627-845 (1012)
175 KOG0771 Prolactin regulatory e 99.9 2.6E-20 5.7E-25 142.0 16.5 202 13-281 148-354 (398)
176 KOG2048 WD40 repeat protein [G 99.9 9.3E-20 2E-24 146.7 20.3 249 2-282 62-320 (691)
177 KOG0303 Actin-binding protein 99.9 1.1E-20 2.4E-25 142.9 14.1 172 85-284 75-252 (472)
178 COG2319 FOG: WD40 repeat [Gene 99.9 9.7E-19 2.1E-23 145.5 26.6 264 3-307 60-336 (466)
179 KOG1034 Transcriptional repres 99.9 1.1E-20 2.4E-25 139.7 12.7 218 2-281 129-383 (385)
180 KOG1274 WD40 repeat protein [G 99.9 1.2E-19 2.7E-24 150.8 19.4 180 11-260 98-287 (933)
181 KOG1524 WD40 repeat-containing 99.8 9.7E-20 2.1E-24 143.3 17.0 226 6-264 12-246 (737)
182 KOG1034 Transcriptional repres 99.8 1.7E-19 3.6E-24 133.6 16.6 221 3-281 33-279 (385)
183 KOG0650 WD40 repeat nucleolar 99.8 6.4E-20 1.4E-24 145.9 14.0 207 6-278 519-732 (733)
184 KOG1517 Guanine nucleotide bin 99.8 1.1E-18 2.3E-23 147.6 21.6 264 11-309 1066-1361(1387)
185 PRK01742 tolB translocation pr 99.8 2.8E-19 6.1E-24 147.5 17.8 223 2-309 197-425 (429)
186 KOG1009 Chromatin assembly com 99.8 1.8E-19 3.9E-24 136.8 14.7 250 2-309 59-352 (434)
187 KOG1538 Uncharacterized conser 99.8 1.8E-18 3.8E-23 139.8 21.0 217 11-309 14-273 (1081)
188 KOG1524 WD40 repeat-containing 99.8 5.9E-19 1.3E-23 138.9 16.1 175 3-260 99-273 (737)
189 KOG2919 Guanine nucleotide-bin 99.8 2.6E-18 5.7E-23 127.1 17.9 227 10-263 105-359 (406)
190 KOG0642 Cell-cycle nuclear pro 99.8 1.2E-18 2.5E-23 137.8 15.2 176 2-217 338-562 (577)
191 KOG1587 Cytoplasmic dynein int 99.8 1.3E-17 2.8E-22 137.4 19.6 226 5-287 288-522 (555)
192 KOG0649 WD40 repeat protein [G 99.8 3.4E-17 7.5E-22 116.7 19.0 208 3-281 57-274 (325)
193 COG2319 FOG: WD40 repeat [Gene 99.8 1.7E-16 3.7E-21 131.9 26.7 208 2-282 149-360 (466)
194 PRK03629 tolB translocation pr 99.8 9.4E-17 2E-21 132.3 23.2 224 4-309 194-427 (429)
195 KOG2139 WD40 repeat protein [G 99.8 5.5E-17 1.2E-21 122.0 19.0 197 11-282 100-310 (445)
196 KOG0322 G-protein beta subunit 99.8 6.6E-18 1.4E-22 121.6 13.2 166 11-215 152-322 (323)
197 KOG2394 WD40 protein DMR-N9 [G 99.8 2.1E-17 4.5E-22 130.2 16.9 163 11-195 221-384 (636)
198 KOG1310 WD40 repeat protein [G 99.8 1.4E-18 3.1E-23 137.2 10.5 186 82-281 41-231 (758)
199 KOG2110 Uncharacterized conser 99.8 5.1E-16 1.1E-20 117.0 22.7 233 11-283 7-250 (391)
200 KOG1272 WD40-repeat-containing 99.8 3.5E-18 7.5E-23 132.2 10.6 230 13-281 133-362 (545)
201 PF08662 eIF2A: Eukaryotic tra 99.8 1.6E-16 3.5E-21 116.0 18.1 158 95-281 9-179 (194)
202 PRK04922 tolB translocation pr 99.8 2E-16 4.4E-21 130.9 20.7 225 3-309 198-432 (433)
203 KOG1523 Actin-related protein 99.8 1.6E-16 3.5E-21 117.6 17.4 195 90-309 9-216 (361)
204 PRK05137 tolB translocation pr 99.8 5.5E-16 1.2E-20 128.5 22.9 226 2-309 195-432 (435)
205 PRK11028 6-phosphogluconolacto 99.7 1.9E-15 4.1E-20 121.2 23.4 210 12-281 82-304 (330)
206 KOG0771 Prolactin regulatory e 99.7 4.3E-17 9.3E-22 124.7 12.9 180 95-309 148-334 (398)
207 PRK02889 tolB translocation pr 99.7 5.5E-16 1.2E-20 127.9 20.6 227 3-309 190-424 (427)
208 KOG3881 Uncharacterized conser 99.7 1E-15 2.2E-20 116.2 19.7 200 22-295 116-328 (412)
209 KOG2321 WD40 repeat protein [G 99.7 4E-16 8.7E-21 124.1 16.5 241 7-297 50-312 (703)
210 KOG0644 Uncharacterized conser 99.7 1.4E-17 3E-22 137.7 8.5 204 82-309 181-405 (1113)
211 KOG2394 WD40 protein DMR-N9 [G 99.7 1.9E-16 4.2E-21 124.9 14.2 166 91-309 219-384 (636)
212 PRK11028 6-phosphogluconolacto 99.7 6.9E-15 1.5E-19 118.0 23.7 213 11-282 36-259 (330)
213 KOG1240 Protein kinase contain 99.7 4.3E-16 9.3E-21 133.9 17.3 267 1-283 1041-1336(1431)
214 KOG2110 Uncharacterized conser 99.7 2.4E-14 5.2E-19 108.2 23.5 135 74-219 109-251 (391)
215 KOG2139 WD40 repeat protein [G 99.7 5.6E-15 1.2E-19 111.4 20.0 230 11-282 142-384 (445)
216 PF08662 eIF2A: Eukaryotic tra 99.7 2.7E-15 5.9E-20 109.6 17.9 114 90-217 58-180 (194)
217 KOG4227 WD40 repeat protein [G 99.7 1.1E-15 2.3E-20 116.5 15.8 170 85-282 50-226 (609)
218 KOG1517 Guanine nucleotide bin 99.7 1.3E-15 2.8E-20 129.3 17.2 248 11-282 1111-1382(1387)
219 KOG1963 WD40 repeat protein [G 99.7 8.9E-15 1.9E-19 121.8 20.9 249 2-283 51-324 (792)
220 PRK00178 tolB translocation pr 99.7 5.4E-14 1.2E-18 116.9 23.0 224 4-309 194-427 (430)
221 KOG1409 Uncharacterized conser 99.7 1.2E-14 2.5E-19 108.9 16.1 209 1-218 17-272 (404)
222 PRK01742 tolB translocation pr 99.7 1E-14 2.3E-19 120.6 17.5 159 86-282 198-362 (429)
223 TIGR02800 propeller_TolB tol-p 99.7 6.6E-14 1.4E-18 116.2 21.7 223 3-307 184-416 (417)
224 KOG4547 WD40 repeat-containing 99.6 4.3E-14 9.4E-19 113.0 19.2 190 18-219 2-223 (541)
225 KOG4497 Uncharacterized conser 99.6 6.6E-14 1.4E-18 104.5 18.3 270 14-309 13-371 (447)
226 KOG1963 WD40 repeat protein [G 99.6 8.1E-14 1.8E-18 116.2 20.6 169 6-220 203-379 (792)
227 PRK04792 tolB translocation pr 99.6 7.3E-14 1.6E-18 115.8 20.5 218 11-309 219-446 (448)
228 KOG2111 Uncharacterized conser 99.6 1E-12 2.2E-17 97.7 23.2 238 11-283 7-258 (346)
229 PRK01029 tolB translocation pr 99.6 7.1E-13 1.5E-17 109.1 22.8 185 93-309 232-424 (428)
230 KOG1272 WD40-repeat-containing 99.6 4.2E-15 9.2E-20 115.4 8.8 188 3-256 205-392 (545)
231 KOG2111 Uncharacterized conser 99.6 3.8E-12 8.2E-17 94.7 23.5 102 110-219 155-259 (346)
232 KOG0280 Uncharacterized conser 99.6 1E-13 2.2E-18 101.8 15.2 176 83-281 157-333 (339)
233 KOG3881 Uncharacterized conser 99.6 1E-13 2.2E-18 105.6 15.2 166 12-217 151-321 (412)
234 PRK02889 tolB translocation pr 99.6 7.8E-13 1.7E-17 109.3 20.9 169 85-282 189-361 (427)
235 KOG1240 Protein kinase contain 99.6 1.7E-13 3.6E-18 118.4 15.9 202 80-309 1037-1248(1431)
236 KOG0280 Uncharacterized conser 99.6 5.2E-13 1.1E-17 98.2 15.8 160 94-282 124-285 (339)
237 PRK05137 tolB translocation pr 99.5 3.1E-12 6.6E-17 106.3 22.0 164 85-281 195-366 (435)
238 KOG4497 Uncharacterized conser 99.5 2.2E-13 4.7E-18 101.8 13.3 232 11-281 93-391 (447)
239 KOG1354 Serine/threonine prote 99.5 3.5E-13 7.6E-18 101.2 13.9 233 11-282 27-302 (433)
240 PF02239 Cytochrom_D1: Cytochr 99.5 1.8E-11 3.9E-16 98.5 23.4 236 13-309 40-325 (369)
241 KOG0974 WD-repeat protein WDR6 99.5 8.8E-13 1.9E-17 112.2 16.3 147 99-282 141-289 (967)
242 PRK04922 tolB translocation pr 99.5 3.2E-12 7E-17 106.1 19.2 163 86-281 198-368 (433)
243 KOG1064 RAVE (regulator of V-A 99.5 2E-13 4.4E-18 122.0 11.3 187 11-282 2210-2399(2439)
244 KOG1334 WD40 repeat protein [G 99.5 3.1E-13 6.6E-18 105.9 11.0 202 83-308 134-345 (559)
245 PRK03629 tolB translocation pr 99.5 1.9E-11 4.2E-16 101.1 21.9 165 87-282 194-364 (429)
246 KOG0309 Conserved WD40 repeat- 99.5 5.3E-13 1.1E-17 109.9 11.1 257 11-282 26-340 (1081)
247 KOG4547 WD40 repeat-containing 99.4 7E-12 1.5E-16 100.6 15.7 165 103-307 4-192 (541)
248 KOG2041 WD40 repeat protein [G 99.4 6.2E-12 1.3E-16 103.5 15.6 254 11-308 16-317 (1189)
249 KOG0974 WD-repeat protein WDR6 99.4 1.9E-12 4.2E-17 110.2 13.1 151 16-219 140-291 (967)
250 PF10282 Lactonase: Lactonase, 99.4 5.3E-10 1.1E-14 90.0 25.8 222 12-281 89-322 (345)
251 KOG1409 Uncharacterized conser 99.4 9.3E-12 2E-16 93.7 14.3 163 2-169 108-272 (404)
252 COG5170 CDC55 Serine/threonine 99.4 6.1E-12 1.3E-16 93.6 12.9 242 11-295 28-318 (460)
253 KOG2321 WD40 repeat protein [G 99.4 1.9E-11 4.2E-16 98.0 16.5 244 6-287 90-349 (703)
254 PF02239 Cytochrom_D1: Cytochr 99.4 3.1E-10 6.6E-15 91.4 21.9 170 81-282 26-203 (369)
255 PF10282 Lactonase: Lactonase, 99.4 1.4E-09 3.1E-14 87.5 25.7 213 13-281 40-275 (345)
256 KOG1354 Serine/threonine prote 99.4 1.9E-11 4E-16 92.2 13.6 252 11-282 86-360 (433)
257 COG2706 3-carboxymuconate cycl 99.3 3.7E-09 8E-14 80.7 23.9 220 13-282 92-322 (346)
258 KOG4532 WD40-like repeat conta 99.3 6.1E-10 1.3E-14 81.4 18.9 152 105-283 129-284 (344)
259 TIGR02800 propeller_TolB tol-p 99.3 4.7E-10 1E-14 93.3 21.1 165 85-282 183-355 (417)
260 KOG2315 Predicted translation 99.3 5.6E-10 1.2E-14 89.5 20.0 155 95-281 221-390 (566)
261 KOG4714 Nucleoporin [Nuclear s 99.3 2.2E-11 4.7E-16 88.3 10.1 217 5-281 32-254 (319)
262 PRK01029 tolB translocation pr 99.3 6.7E-10 1.4E-14 91.7 19.5 185 72-281 166-359 (428)
263 PRK00178 tolB translocation pr 99.3 8.9E-10 1.9E-14 91.8 20.0 177 73-282 181-364 (430)
264 KOG4190 Uncharacterized conser 99.3 9.4E-12 2E-16 99.7 7.4 173 1-217 728-907 (1034)
265 KOG3914 WD repeat protein WDR4 99.3 7.3E-11 1.6E-15 90.7 11.4 160 12-182 65-232 (390)
266 KOG2695 WD40 repeat protein [G 99.3 1.6E-11 3.5E-16 92.5 7.3 155 108-296 228-385 (425)
267 PRK04792 tolB translocation pr 99.3 2.3E-09 5E-14 89.2 20.9 163 87-281 213-382 (448)
268 PRK04043 tolB translocation pr 99.2 8.9E-09 1.9E-13 84.6 22.5 157 90-281 231-400 (419)
269 KOG4714 Nucleoporin [Nuclear s 99.2 2.4E-10 5.3E-15 83.0 11.5 97 114-217 159-255 (319)
270 KOG3914 WD repeat protein WDR4 99.2 6.5E-10 1.4E-14 85.6 13.3 158 94-282 65-224 (390)
271 KOG2314 Translation initiation 99.2 1.4E-08 3E-13 81.8 21.0 143 115-281 426-573 (698)
272 KOG1064 RAVE (regulator of V-A 99.2 4.3E-10 9.3E-15 101.6 12.6 166 90-296 2207-2375(2439)
273 PLN02919 haloacid dehalogenase 99.2 3.5E-08 7.7E-13 89.9 25.0 166 95-282 686-889 (1057)
274 PF15492 Nbas_N: Neuroblastoma 99.2 2E-08 4.4E-13 74.5 19.2 197 13-283 47-261 (282)
275 PF00400 WD40: WD domain, G-be 99.2 5.2E-11 1.1E-15 62.8 4.2 36 1-37 4-39 (39)
276 KOG2695 WD40 repeat protein [G 99.1 3.1E-10 6.7E-15 85.8 9.0 122 90-217 251-377 (425)
277 KOG2315 Predicted translation 99.1 3.8E-08 8.1E-13 79.3 21.0 260 11-309 36-364 (566)
278 TIGR02658 TTQ_MADH_Hv methylam 99.1 1E-07 2.2E-12 75.4 22.8 244 17-295 53-338 (352)
279 COG4946 Uncharacterized protei 99.1 1.4E-07 3.1E-12 74.8 22.7 117 6-168 357-478 (668)
280 COG2706 3-carboxymuconate cycl 99.1 3.2E-07 7E-12 70.3 24.0 223 7-282 38-275 (346)
281 PF04762 IKI3: IKI3 family; I 99.1 3.4E-08 7.4E-13 88.5 20.8 189 11-217 122-334 (928)
282 PF08450 SGL: SMP-30/Gluconola 99.1 2.9E-07 6.3E-12 70.7 23.1 216 14-307 4-232 (246)
283 KOG1832 HIV-1 Vpr-binding prot 99.1 1.9E-10 4E-15 97.3 5.6 201 2-296 1095-1300(1516)
284 KOG0882 Cyclophilin-related pe 99.1 9.5E-09 2.1E-13 80.6 14.2 229 7-296 8-240 (558)
285 KOG1645 RING-finger-containing 99.0 1.8E-08 3.8E-13 78.0 14.9 158 2-206 187-351 (463)
286 KOG2041 WD40 repeat protein [G 99.0 1.7E-08 3.8E-13 83.9 14.3 123 2-168 65-187 (1189)
287 PLN02919 haloacid dehalogenase 99.0 1.5E-07 3.2E-12 86.0 21.4 171 13-218 686-890 (1057)
288 KOG0309 Conserved WD40 repeat- 99.0 1.7E-09 3.8E-14 89.8 8.3 164 93-284 69-235 (1081)
289 COG4946 Uncharacterized protei 99.0 2.7E-07 5.9E-12 73.3 19.8 117 89-217 357-478 (668)
290 KOG4532 WD40-like repeat conta 99.0 6E-08 1.3E-12 71.3 14.8 176 105-309 85-260 (344)
291 KOG2114 Vacuolar assembly/sort 99.0 1.8E-07 3.9E-12 79.4 19.3 215 16-304 30-261 (933)
292 KOG4190 Uncharacterized conser 99.0 1.6E-09 3.4E-14 87.3 7.1 171 84-282 728-907 (1034)
293 PF00400 WD40: WD domain, G-be 99.0 1.6E-09 3.6E-14 56.9 4.9 38 82-120 2-39 (39)
294 COG5170 CDC55 Serine/threonine 99.0 2.8E-08 6.1E-13 74.5 12.8 205 11-223 87-316 (460)
295 KOG1008 Uncharacterized conser 98.9 8.5E-10 1.8E-14 90.1 4.2 207 12-282 59-276 (783)
296 KOG1912 WD40 repeat protein [G 98.9 3.3E-07 7.3E-12 77.1 18.8 215 1-282 48-305 (1062)
297 KOG2066 Vacuolar assembly/sort 98.9 3.2E-07 7E-12 77.3 18.4 114 90-217 111-234 (846)
298 KOG1912 WD40 repeat protein [G 98.9 1.8E-07 4E-12 78.6 16.6 155 13-217 19-187 (1062)
299 KOG1275 PAB-dependent poly(A) 98.9 8.8E-08 1.9E-12 81.8 14.8 155 93-281 179-342 (1118)
300 KOG2066 Vacuolar assembly/sort 98.9 1.5E-07 3.2E-12 79.3 15.8 189 11-281 41-233 (846)
301 COG5354 Uncharacterized protei 98.9 9.6E-07 2.1E-11 70.7 19.2 236 11-281 73-348 (561)
302 PRK04043 tolB translocation pr 98.9 9.3E-07 2E-11 72.9 19.6 179 70-281 168-357 (419)
303 PF04762 IKI3: IKI3 family; I 98.8 9.4E-07 2E-11 79.5 19.2 214 13-282 213-457 (928)
304 PF07433 DUF1513: Protein of u 98.8 5.6E-06 1.2E-10 63.6 20.1 204 13-281 8-247 (305)
305 KOG1645 RING-finger-containing 98.8 8.1E-08 1.8E-12 74.5 10.0 134 73-217 175-316 (463)
306 PF11768 DUF3312: Protein of u 98.7 9.3E-06 2E-10 66.7 21.3 151 95-255 209-369 (545)
307 TIGR02658 TTQ_MADH_Hv methylam 98.7 7.8E-06 1.7E-10 65.0 20.3 187 13-217 108-331 (352)
308 KOG1275 PAB-dependent poly(A) 98.7 2.4E-07 5.2E-12 79.2 12.2 186 20-214 146-340 (1118)
309 COG5354 Uncharacterized protei 98.7 8.9E-06 1.9E-10 65.4 19.6 138 114-282 255-396 (561)
310 PF08450 SGL: SMP-30/Gluconola 98.7 1.9E-05 4.2E-10 60.7 21.5 150 91-263 85-245 (246)
311 KOG1832 HIV-1 Vpr-binding prot 98.7 7E-08 1.5E-12 82.3 7.7 173 81-297 1091-1265(1516)
312 TIGR03300 assembly_YfgL outer 98.7 5E-06 1.1E-10 68.3 18.1 176 21-217 105-298 (377)
313 KOG2314 Translation initiation 98.6 3.5E-05 7.6E-10 62.9 20.9 261 13-309 214-502 (698)
314 KOG1920 IkappaB kinase complex 98.6 1.7E-05 3.6E-10 70.5 20.1 115 95-218 199-324 (1265)
315 KOG0882 Cyclophilin-related pe 98.6 1.1E-06 2.4E-11 69.4 11.7 205 2-217 47-306 (558)
316 PF07433 DUF1513: Protein of u 98.6 6.3E-05 1.4E-09 58.0 20.8 126 82-217 89-248 (305)
317 KOG1008 Uncharacterized conser 98.6 5.8E-08 1.3E-12 79.8 4.3 188 91-309 56-253 (783)
318 PF08596 Lgl_C: Lethal giant l 98.6 7.3E-06 1.6E-10 66.7 16.2 148 11-167 3-173 (395)
319 TIGR03300 assembly_YfgL outer 98.5 2.9E-05 6.2E-10 63.9 18.2 176 21-217 145-339 (377)
320 PF08553 VID27: VID27 cytoplas 98.5 1.6E-05 3.4E-10 69.4 16.8 137 69-216 502-647 (794)
321 PF11768 DUF3312: Protein of u 98.4 5.1E-06 1.1E-10 68.2 10.9 74 89-168 257-330 (545)
322 KOG2114 Vacuolar assembly/sort 98.4 3.1E-05 6.6E-10 66.5 15.6 181 98-309 30-224 (933)
323 PF13360 PQQ_2: PQQ-like domai 98.4 0.00017 3.6E-09 55.2 18.5 138 106-281 78-230 (238)
324 PF08553 VID27: VID27 cytoplas 98.3 6.2E-05 1.3E-09 65.9 15.7 138 111-281 501-647 (794)
325 KOG3617 WD40 and TPR repeat-co 98.3 9.7E-05 2.1E-09 63.7 16.0 109 13-122 19-131 (1416)
326 KOG2395 Protein involved in va 98.3 0.00034 7.5E-09 57.2 18.3 140 67-217 352-501 (644)
327 KOG1920 IkappaB kinase complex 98.2 0.00053 1.1E-08 61.5 20.5 205 11-283 70-324 (1265)
328 KOG3621 WD40 repeat-containing 98.2 7.6E-05 1.6E-09 62.8 14.2 160 11-217 35-198 (726)
329 smart00320 WD40 WD40 repeats. 98.2 2.6E-06 5.6E-11 44.1 3.8 35 2-37 6-40 (40)
330 PF14783 BBS2_Mid: Ciliary BBS 98.2 0.00021 4.5E-09 46.1 12.8 103 94-212 2-110 (111)
331 KOG4649 PQQ (pyrrolo-quinoline 98.1 0.00053 1.2E-08 51.0 15.7 108 98-217 17-124 (354)
332 COG0823 TolB Periplasmic compo 98.1 0.00036 7.9E-09 57.6 16.4 112 95-217 241-359 (425)
333 PF06977 SdiA-regulated: SdiA- 98.1 0.00089 1.9E-08 50.9 16.9 180 86-281 16-201 (248)
334 COG0823 TolB Periplasmic compo 98.1 0.00027 5.8E-09 58.3 15.0 156 83-263 184-345 (425)
335 KOG4640 Anaphase-promoting com 98.1 2.7E-05 5.9E-10 64.5 9.1 94 91-195 20-115 (665)
336 KOG3621 WD40 repeat-containing 98.1 4.9E-05 1.1E-09 63.8 10.2 121 92-217 34-155 (726)
337 COG3391 Uncharacterized conser 98.0 0.0053 1.1E-07 50.5 21.9 155 93-281 117-283 (381)
338 PRK11138 outer membrane biogen 98.0 0.00076 1.7E-08 55.8 16.6 181 21-217 120-313 (394)
339 PF06977 SdiA-regulated: SdiA- 98.0 0.0035 7.6E-08 47.7 21.4 196 3-260 16-238 (248)
340 PF14783 BBS2_Mid: Ciliary BBS 98.0 0.00079 1.7E-08 43.5 12.5 68 139-217 2-72 (111)
341 PRK11138 outer membrane biogen 98.0 0.0011 2.5E-08 54.8 17.0 96 106-217 258-354 (394)
342 KOG4640 Anaphase-promoting com 98.0 7.4E-05 1.6E-09 62.0 9.2 75 136-219 20-95 (665)
343 PF15492 Nbas_N: Neuroblastoma 97.9 0.0043 9.3E-08 46.9 19.2 167 97-282 3-189 (282)
344 smart00320 WD40 WD40 repeats. 97.9 2.3E-05 5E-10 40.3 4.1 37 83-120 4-40 (40)
345 PF04053 Coatomer_WDAD: Coatom 97.9 0.0043 9.3E-08 51.7 18.6 224 11-281 34-262 (443)
346 PF06433 Me-amine-dh_H: Methyl 97.9 0.0041 8.9E-08 48.9 16.8 246 14-297 40-330 (342)
347 PF08596 Lgl_C: Lethal giant l 97.8 0.0037 7.9E-08 51.3 17.3 203 4-261 82-324 (395)
348 PRK02888 nitrous-oxide reducta 97.8 0.0017 3.7E-08 55.2 15.2 86 185-282 320-405 (635)
349 COG3391 Uncharacterized conser 97.8 0.011 2.3E-07 48.7 19.0 162 94-282 76-240 (381)
350 PF13360 PQQ_2: PQQ-like domai 97.8 0.0097 2.1E-07 45.4 18.6 101 105-217 37-141 (238)
351 KOG3617 WD40 and TPR repeat-co 97.8 6.8E-05 1.5E-09 64.6 6.2 112 95-219 19-134 (1416)
352 PRK02888 nitrous-oxide reducta 97.7 0.0027 5.9E-08 54.1 14.9 100 113-217 295-405 (635)
353 PF00930 DPPIV_N: Dipeptidyl p 97.7 0.015 3.4E-07 47.3 19.0 155 90-264 182-348 (353)
354 PF04053 Coatomer_WDAD: Coatom 97.6 0.0024 5.1E-08 53.1 13.5 143 89-281 30-173 (443)
355 KOG2395 Protein involved in va 97.6 0.0013 2.9E-08 53.9 11.6 143 105-281 347-500 (644)
356 KOG3630 Nuclear pore complex, 97.6 0.0012 2.5E-08 59.1 11.9 158 3-202 94-260 (1405)
357 COG3386 Gluconolactonase [Carb 97.6 0.017 3.6E-07 45.7 17.0 111 94-217 68-194 (307)
358 KOG2444 WD40 repeat protein [G 97.5 0.00025 5.5E-09 51.6 5.5 101 106-217 32-133 (238)
359 KOG2079 Vacuolar assembly/sort 97.5 0.00087 1.9E-08 59.5 9.3 64 148-217 98-161 (1206)
360 KOG2444 WD40 repeat protein [G 97.5 0.00092 2E-08 48.8 8.0 61 105-168 115-178 (238)
361 PF03178 CPSF_A: CPSF A subuni 97.5 0.008 1.7E-07 48.3 14.4 146 104-282 42-203 (321)
362 KOG2079 Vacuolar assembly/sort 97.5 0.0015 3.2E-08 58.2 10.5 71 90-166 129-202 (1206)
363 PF12894 Apc4_WD40: Anaphase-p 97.4 0.00064 1.4E-08 36.6 4.9 30 10-39 12-41 (47)
364 PRK13616 lipoprotein LpqB; Pro 97.4 0.037 8.1E-07 48.1 17.8 141 92-258 350-511 (591)
365 PF04841 Vps16_N: Vps16, N-ter 97.4 0.059 1.3E-06 44.9 18.3 32 185-217 216-247 (410)
366 KOG4649 PQQ (pyrrolo-quinoline 97.3 0.039 8.4E-07 41.6 15.6 82 105-195 64-145 (354)
367 PF12894 Apc4_WD40: Anaphase-p 97.3 0.0013 2.7E-08 35.5 5.1 32 135-167 10-41 (47)
368 cd00216 PQQ_DH Dehydrogenases 97.3 0.035 7.5E-07 47.5 16.5 152 22-182 111-328 (488)
369 PHA02713 hypothetical protein; 97.3 0.043 9.4E-07 47.7 17.1 103 105-217 353-489 (557)
370 COG3204 Uncharacterized protei 97.3 0.054 1.2E-06 41.6 15.7 177 88-281 82-263 (316)
371 PRK13616 lipoprotein LpqB; Pro 97.3 0.074 1.6E-06 46.3 18.2 113 94-219 399-528 (591)
372 KOG4441 Proteins containing BT 97.2 0.046 1E-06 47.5 16.7 149 105-281 382-546 (571)
373 PF05096 Glu_cyclase_2: Glutam 97.2 0.041 8.9E-07 42.0 13.9 183 11-205 46-250 (264)
374 COG3386 Gluconolactonase [Carb 97.1 0.058 1.3E-06 42.7 15.2 119 81-207 152-277 (307)
375 PF15390 DUF4613: Domain of un 97.1 0.025 5.3E-07 47.6 13.2 121 90-217 55-187 (671)
376 PF04841 Vps16_N: Vps16, N-ter 97.1 0.13 2.7E-06 43.0 18.3 29 92-122 81-109 (410)
377 PF05694 SBP56: 56kDa selenium 97.1 0.13 2.8E-06 42.2 18.9 170 97-283 135-344 (461)
378 PF02897 Peptidase_S9_N: Proly 97.0 0.16 3.6E-06 42.5 24.3 246 11-281 125-404 (414)
379 PF10647 Gmad1: Lipoprotein Lp 97.0 0.11 2.3E-06 40.2 17.5 155 93-264 25-186 (253)
380 PF03178 CPSF_A: CPSF A subuni 97.0 0.11 2.5E-06 41.7 16.1 115 93-212 131-261 (321)
381 PF10647 Gmad1: Lipoprotein Lp 96.9 0.13 2.8E-06 39.7 17.1 118 93-212 67-192 (253)
382 PHA02713 hypothetical protein; 96.9 0.031 6.7E-07 48.6 12.7 93 115-217 433-534 (557)
383 cd00216 PQQ_DH Dehydrogenases 96.9 0.24 5.1E-06 42.5 18.7 185 21-217 61-320 (488)
384 PF05694 SBP56: 56kDa selenium 96.8 0.013 2.9E-07 47.6 9.2 190 70-263 156-393 (461)
385 PHA03098 kelch-like protein; P 96.8 0.29 6.4E-06 42.6 18.4 103 105-217 344-465 (534)
386 COG3490 Uncharacterized protei 96.8 0.12 2.7E-06 39.5 13.5 104 94-203 70-179 (366)
387 KOG3630 Nuclear pore complex, 96.8 0.047 1E-06 49.6 12.8 151 93-262 102-262 (1405)
388 PF00780 CNH: CNH domain; Int 96.7 0.2 4.3E-06 39.3 20.6 58 105-168 106-166 (275)
389 PF12234 Rav1p_C: RAVE protein 96.7 0.14 3E-06 44.5 15.0 122 137-281 30-156 (631)
390 KOG2247 WD40 repeat-containing 96.7 0.00018 4E-09 58.2 -1.9 147 7-207 33-179 (615)
391 PF14655 RAB3GAP2_N: Rab3 GTPa 96.6 0.32 6.8E-06 40.3 20.4 53 234-300 298-350 (415)
392 PF02897 Peptidase_S9_N: Proly 96.6 0.35 7.6E-06 40.5 18.9 117 93-217 125-261 (414)
393 PF00930 DPPIV_N: Dipeptidyl p 96.6 0.012 2.6E-07 48.0 7.7 94 113-217 22-132 (353)
394 PF14870 PSII_BNR: Photosynthe 96.5 0.31 6.7E-06 38.6 15.2 150 11-213 146-301 (302)
395 PF10313 DUF2415: Uncharacteri 96.4 0.015 3.2E-07 30.4 4.7 32 137-168 1-34 (43)
396 COG3204 Uncharacterized protei 96.3 0.34 7.3E-06 37.5 19.4 169 4-217 81-264 (316)
397 PF14870 PSII_BNR: Photosynthe 96.2 0.44 9.5E-06 37.7 17.0 112 90-210 143-255 (302)
398 PF08728 CRT10: CRT10; InterP 96.1 0.88 1.9E-05 40.3 18.1 119 93-216 102-246 (717)
399 PF12234 Rav1p_C: RAVE protein 96.1 0.26 5.6E-06 42.9 13.3 119 93-217 31-157 (631)
400 PF12657 TFIIIC_delta: Transcr 96.1 0.13 2.8E-06 37.1 10.1 31 92-122 86-121 (173)
401 COG5167 VID27 Protein involved 96.1 0.49 1.1E-05 39.6 14.0 142 105-281 481-632 (776)
402 PF10313 DUF2415: Uncharacteri 96.1 0.033 7.3E-07 29.1 5.0 32 92-123 1-34 (43)
403 COG3490 Uncharacterized protei 96.1 0.46 9.9E-06 36.6 13.7 33 185-217 279-311 (366)
404 KOG4499 Ca2+-binding protein R 96.0 0.27 5.9E-06 36.6 11.1 96 94-196 160-264 (310)
405 COG5276 Uncharacterized conser 96.0 0.51 1.1E-05 36.6 17.6 118 91-220 86-203 (370)
406 PF14761 HPS3_N: Hermansky-Pud 96.0 0.42 9.1E-06 35.3 13.0 118 150-282 29-164 (215)
407 KOG1916 Nuclear protein, conta 96.0 0.016 3.4E-07 51.2 5.4 127 85-221 126-270 (1283)
408 PF06433 Me-amine-dh_H: Methyl 96.0 0.29 6.2E-06 39.0 11.8 103 107-217 198-321 (342)
409 KOG4441 Proteins containing BT 95.9 1.1 2.3E-05 39.4 19.0 111 95-217 326-453 (571)
410 TIGR02604 Piru_Ver_Nterm putat 95.9 0.81 1.7E-05 37.7 16.8 109 92-205 14-142 (367)
411 PHA02790 Kelch-like protein; P 95.8 0.74 1.6E-05 39.5 14.8 100 105-217 364-471 (480)
412 PF05096 Glu_cyclase_2: Glutam 95.8 0.63 1.4E-05 35.8 17.1 114 93-220 46-161 (264)
413 KOG4499 Ca2+-binding protein R 95.6 0.64 1.4E-05 34.8 14.8 99 188-308 160-262 (310)
414 COG5167 VID27 Protein involved 95.4 0.48 1E-05 39.7 11.4 139 66-217 485-633 (776)
415 PF00780 CNH: CNH domain; Int 95.3 1.1 2.3E-05 35.2 15.6 147 105-281 8-165 (275)
416 PHA03098 kelch-like protein; P 95.3 1.1 2.4E-05 39.1 14.4 103 105-217 391-512 (534)
417 KOG2377 Uncharacterized conser 95.3 0.73 1.6E-05 38.1 11.9 108 89-205 64-173 (657)
418 COG4590 ABC-type uncharacteriz 95.3 0.62 1.4E-05 38.4 11.5 168 87-284 216-389 (733)
419 PRK10115 protease 2; Provision 95.2 2.3 5.1E-05 38.3 25.3 73 95-168 175-256 (686)
420 PF14761 HPS3_N: Hermansky-Pud 95.0 1 2.3E-05 33.3 11.7 106 105-217 30-164 (215)
421 KOG2377 Uncharacterized conser 95.0 1.2 2.5E-05 37.0 12.2 136 140-307 26-161 (657)
422 TIGR02604 Piru_Ver_Nterm putat 95.0 1.7 3.8E-05 35.8 16.5 101 93-205 73-202 (367)
423 PF10168 Nup88: Nuclear pore c 94.9 1 2.2E-05 40.4 13.0 82 137-221 85-184 (717)
424 PF14655 RAB3GAP2_N: Rab3 GTPa 94.8 0.58 1.3E-05 38.8 10.6 88 87-183 303-408 (415)
425 PF07569 Hira: TUP1-like enhan 94.8 0.3 6.5E-06 36.7 8.3 82 16-125 17-98 (219)
426 PF15390 DUF4613: Domain of un 94.8 2.4 5.2E-05 36.5 14.7 71 95-168 116-187 (671)
427 KOG4460 Nuclear pore complex, 94.6 0.69 1.5E-05 38.9 10.2 83 138-222 105-204 (741)
428 PF07676 PD40: WD40-like Beta 94.4 0.26 5.6E-06 25.2 5.2 30 184-213 7-38 (39)
429 KOG2247 WD40 repeat-containing 94.4 0.011 2.4E-07 48.4 -0.1 134 137-309 35-169 (615)
430 PF08728 CRT10: CRT10; InterP 94.3 1.1 2.3E-05 39.9 11.4 125 20-166 113-245 (717)
431 PHA02790 Kelch-like protein; P 94.3 3 6.4E-05 35.9 14.1 102 102-217 318-424 (480)
432 PF07569 Hira: TUP1-like enhan 94.2 0.57 1.2E-05 35.3 8.7 68 148-217 21-96 (219)
433 PF07995 GSDH: Glucose / Sorbo 94.1 2.6 5.7E-05 34.1 14.3 51 93-146 3-58 (331)
434 PF07676 PD40: WD40-like Beta 93.9 0.29 6.4E-06 25.0 4.8 33 3-36 3-38 (39)
435 PF14583 Pectate_lyase22: Olig 93.6 3.3 7.2E-05 33.9 12.3 154 98-282 42-223 (386)
436 KOG1897 Damage-specific DNA bi 93.6 5.8 0.00013 36.5 15.5 154 94-281 777-942 (1096)
437 PRK10115 protease 2; Provision 93.6 5.2 0.00011 36.2 14.8 117 138-281 128-255 (686)
438 PF10168 Nup88: Nuclear pore c 93.5 5.5 0.00012 36.0 14.6 89 185-283 84-181 (717)
439 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.3 5.2 0.00011 34.9 19.6 51 115-168 272-334 (527)
440 PF12657 TFIIIC_delta: Transcr 93.1 1.3 2.8E-05 32.0 8.7 32 186-217 86-122 (173)
441 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.0 5.7 0.00012 34.6 21.1 53 73-125 273-336 (527)
442 PF14727 PHTB1_N: PTHB1 N-term 92.9 5 0.00011 33.6 16.8 116 101-217 34-164 (418)
443 PF01731 Arylesterase: Arylest 92.8 0.82 1.8E-05 28.4 6.2 32 186-217 54-85 (86)
444 KOG4460 Nuclear pore complex, 92.7 2.7 5.9E-05 35.6 10.7 87 187-283 105-200 (741)
445 KOG1900 Nuclear pore complex, 92.6 0.87 1.9E-05 42.6 8.5 74 91-169 178-274 (1311)
446 COG4590 ABC-type uncharacteriz 92.4 3.1 6.8E-05 34.6 10.5 162 11-218 222-388 (733)
447 KOG3616 Selective LIM binding 92.0 8.7 0.00019 34.4 14.5 30 11-40 16-45 (1636)
448 KOG1916 Nuclear protein, conta 92.0 0.11 2.5E-06 46.1 2.3 155 113-300 110-283 (1283)
449 TIGR02276 beta_rpt_yvtn 40-res 91.9 0.99 2.1E-05 23.3 5.4 23 195-217 1-23 (42)
450 PF07995 GSDH: Glucose / Sorbo 91.7 5.4 0.00012 32.4 11.5 26 12-38 4-29 (331)
451 PRK13684 Ycf48-like protein; P 91.6 6.4 0.00014 32.0 16.6 112 91-215 214-330 (334)
452 PLN02153 epithiospecifier prot 91.1 7.3 0.00016 31.7 14.6 22 105-126 139-171 (341)
453 PF14727 PHTB1_N: PTHB1 N-term 91.0 8.5 0.00018 32.3 18.3 152 21-217 37-205 (418)
454 PF12768 Rax2: Cortical protei 90.8 6.7 0.00015 30.9 11.0 99 90-195 35-146 (281)
455 KOG1900 Nuclear pore complex, 90.6 5.6 0.00012 37.8 11.3 172 95-282 82-273 (1311)
456 PF02333 Phytase: Phytase; In 90.4 9 0.0002 31.6 20.3 149 114-282 127-291 (381)
457 COG5276 Uncharacterized conser 90.2 7.7 0.00017 30.5 14.0 134 118-283 68-201 (370)
458 TIGR02276 beta_rpt_yvtn 40-res 90.0 1.6 3.5E-05 22.4 6.0 31 101-133 1-31 (42)
459 PLN02193 nitrile-specifier pro 90.0 12 0.00025 32.3 13.9 62 105-169 280-353 (470)
460 PF14583 Pectate_lyase22: Olig 89.7 10 0.00022 31.2 18.4 114 97-220 86-226 (386)
461 PF11715 Nup160: Nucleoporin N 88.8 2.8 6.1E-05 36.7 8.2 71 105-181 159-256 (547)
462 PF12768 Rax2: Cortical protei 88.8 10 0.00022 29.9 11.0 52 159-217 16-73 (281)
463 PF13449 Phytase-like: Esteras 87.5 14 0.0003 30.0 18.4 169 91-281 19-249 (326)
464 TIGR03118 PEPCTERM_chp_1 conse 87.4 13 0.00028 29.5 17.9 122 93-217 24-171 (336)
465 KOG3522 Predicted guanine nucl 87.2 4.1 8.9E-05 36.6 7.9 136 106-261 549-686 (925)
466 PF14781 BBS2_N: Ciliary BBSom 86.9 7.7 0.00017 26.5 13.2 112 96-217 3-126 (136)
467 TIGR03606 non_repeat_PQQ dehyd 86.8 19 0.0004 30.7 18.6 55 91-146 29-88 (454)
468 PF07250 Glyoxal_oxid_N: Glyox 86.3 13 0.00029 28.5 10.6 95 116-215 48-147 (243)
469 PF01436 NHL: NHL repeat; Int 85.9 2.4 5.1E-05 19.8 3.5 24 13-36 5-28 (28)
470 KOG2280 Vacuolar assembly/sort 85.8 26 0.00057 31.5 15.4 33 184-217 215-247 (829)
471 TIGR03548 mutarot_permut cycli 85.3 18 0.00039 29.2 15.0 63 105-169 125-196 (323)
472 KOG1983 Tomosyn and related SN 85.1 23 0.0005 33.8 12.0 28 13-40 39-66 (993)
473 PLN00033 photosystem II stabil 85.0 22 0.00047 29.8 17.3 70 134-214 278-354 (398)
474 COG3823 Glutamine cyclotransfe 83.3 17 0.00036 27.2 10.5 173 20-204 55-247 (262)
475 PF14779 BBS1: Ciliary BBSome 83.3 16 0.00034 28.3 8.5 71 136-213 176-255 (257)
476 PRK13684 Ycf48-like protein; P 83.3 23 0.0005 28.8 17.6 108 91-211 172-283 (334)
477 PF11715 Nup160: Nucleoporin N 83.2 2.3 4.9E-05 37.3 4.8 33 11-43 216-252 (547)
478 PF03088 Str_synth: Strictosid 83.2 4.9 0.00011 25.2 5.0 54 155-215 33-86 (89)
479 smart00564 PQQ beta-propeller 83.0 3.8 8.3E-05 19.6 3.7 26 149-180 6-31 (33)
480 smart00036 CNH Domain found in 82.7 23 0.0005 28.4 12.8 63 150-219 14-76 (302)
481 TIGR03606 non_repeat_PQQ dehyd 82.6 30 0.00065 29.6 14.6 58 135-197 28-90 (454)
482 KOG3616 Selective LIM binding 80.8 5.2 0.00011 35.7 5.9 70 136-216 14-83 (1636)
483 PF13449 Phytase-like: Esteras 80.6 29 0.00063 28.2 23.4 170 93-265 86-309 (326)
484 PLN02153 epithiospecifier prot 79.9 31 0.00068 28.1 17.4 62 105-168 87-168 (341)
485 TIGR02171 Fb_sc_TIGR02171 Fibr 79.3 41 0.00088 31.3 10.9 82 113-202 328-415 (912)
486 PF01011 PQQ: PQQ enzyme repea 79.0 6.6 0.00014 19.8 4.0 27 151-183 2-28 (38)
487 PLN00033 photosystem II stabil 78.5 39 0.00085 28.4 16.4 109 91-213 280-396 (398)
488 KOG2280 Vacuolar assembly/sort 77.6 55 0.0012 29.7 14.4 76 83-163 75-151 (829)
489 PF03088 Str_synth: Strictosid 77.4 15 0.00033 23.1 7.2 40 112-155 35-74 (89)
490 PF14781 BBS2_N: Ciliary BBSom 77.0 21 0.00045 24.5 11.7 119 13-168 2-126 (136)
491 COG5308 NUP170 Nuclear pore co 76.3 48 0.001 30.8 10.3 73 92-168 182-276 (1263)
492 PLN02193 nitrile-specifier pro 76.2 50 0.0011 28.5 12.7 104 105-217 230-352 (470)
493 PF01731 Arylesterase: Arylest 76.2 16 0.00035 22.8 6.3 30 245-281 55-84 (86)
494 COG5290 IkappaB kinase complex 76.2 64 0.0014 29.6 13.8 72 139-217 249-325 (1243)
495 PF05935 Arylsulfotrans: Aryls 76.0 52 0.0011 28.5 15.1 80 112-204 126-208 (477)
496 PF11635 Med16: Mediator compl 75.1 71 0.0015 29.6 18.3 73 137-211 260-345 (753)
497 TIGR03118 PEPCTERM_chp_1 conse 74.9 41 0.0009 26.9 20.8 27 13-39 26-52 (336)
498 PF12341 DUF3639: Protein of u 74.5 7.4 0.00016 18.1 3.6 26 137-165 2-27 (27)
499 smart00036 CNH Domain found in 74.3 44 0.00094 26.8 11.8 61 105-169 14-75 (302)
500 PRK14131 N-acetylneuraminic ac 73.7 51 0.0011 27.4 15.6 42 114-157 189-230 (376)
No 1
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.9e-47 Score=286.98 Aligned_cols=263 Identities=22% Similarity=0.340 Sum_probs=231.1
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc----ccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK----SAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
-+. +|..+.|+++++.|+||+.+|.++||+..+......+...... ..........++..+.++.+++|...+..
T Consensus 174 d~r-Pis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 174 DTR-PISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET 252 (459)
T ss_pred CCC-cceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence 355 8999999999999999999999999999877433333222211 11111134456677889999999999999
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
++..+.+|...|..++|+|+| ++|+|++.|.+-++||+++.. ......+|...|.+++|.| +|.++++|+.|..-+
T Consensus 253 ~l~~l~gH~~RVs~VafHPsG-~~L~TasfD~tWRlWD~~tk~--ElL~QEGHs~~v~~iaf~~-DGSL~~tGGlD~~~R 328 (459)
T KOG0272|consen 253 PLQDLEGHLARVSRVAFHPSG-KFLGTASFDSTWRLWDLETKS--ELLLQEGHSKGVFSIAFQP-DGSLAATGGLDSLGR 328 (459)
T ss_pred chhhhhcchhhheeeeecCCC-ceeeecccccchhhcccccch--hhHhhcccccccceeEecC-CCceeeccCccchhh
Confidence 999999999999999999999 999999999999999999988 5677789999999999999 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
|||+|+ ++++..+.+|..+|.+|+|+|+|.. +|+|+.|++++|||++. ...++.+.+|
T Consensus 329 vWDlRt------gr~im~L~gH~k~I~~V~fsPNGy~-lATgs~Dnt~kVWDLR~---------------r~~ly~ipAH 386 (459)
T KOG0272|consen 329 VWDLRT------GRCIMFLAGHIKEILSVAFSPNGYH-LATGSSDNTCKVWDLRM---------------RSELYTIPAH 386 (459)
T ss_pred eeeccc------CcEEEEecccccceeeEeECCCceE-EeecCCCCcEEEeeecc---------------cccceecccc
Confidence 999999 9999999999999999999999985 78999999999999998 4457888999
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+-|+.|.|+|..+++++++|.| ++++||... +..+++.+.||.+.|.+|+.+|
T Consensus 387 ~nlVS~Vk~~p~~g~fL~TasyD-------~t~kiWs~~------~~~~~ksLaGHe~kV~s~Dis~ 440 (459)
T KOG0272|consen 387 SNLVSQVKYSPQEGYFLVTASYD-------NTVKIWSTR------TWSPLKSLAGHEGKVISLDISP 440 (459)
T ss_pred cchhhheEecccCCeEEEEcccC-------cceeeecCC------CcccchhhcCCccceEEEEecc
Confidence 99999999999888888877766 999999999 7899999999999999998875
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.4e-46 Score=280.29 Aligned_cols=269 Identities=21% Similarity=0.310 Sum_probs=228.0
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc-----c---cCCCCceeecCCCCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK-----S---AGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~ 72 (309)
+.+.+||.. -|.|++|+|||+.||+|+.||+|++||.+++...-........ . .........++....++.
T Consensus 150 ~~t~KgH~~-WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~ 228 (480)
T KOG0271|consen 150 LFTCKGHKN-WVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGS 228 (480)
T ss_pred ceeecCCcc-EEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCC
Confidence 357899999 8999999999999999999999999998887444333222211 1 111122235667788999
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEec-------
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN------- 145 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~------- 145 (309)
+++|+......+..+.+|+.+|+|++|-.+| ++++|+.|++|++|+...+. ....+++|...|+.++.+
T Consensus 229 vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g--liySgS~DrtIkvw~a~dG~--~~r~lkGHahwvN~lalsTdy~LRt 304 (480)
T KOG0271|consen 229 VRIWDTKLGTCVRTLSGHTASVTCVRWGGEG--LIYSGSQDRTIKVWRALDGK--LCRELKGHAHWVNHLALSTDYVLRT 304 (480)
T ss_pred EEEEEccCceEEEEeccCccceEEEEEcCCc--eEEecCCCceEEEEEccchh--HHHhhcccchheeeeeccchhhhhc
Confidence 9999999999999999999999999997765 89999999999999998887 788899999999999887
Q ss_pred ----c------------------------CCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC
Q 021657 146 ----P------------------------LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197 (309)
Q Consensus 146 ----~------------------------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 197 (309)
| +++..|++|+.|.++.+|+.... .+++.++.+|..-|+.+.|+||+
T Consensus 305 gaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~-----kkpi~rmtgHq~lVn~V~fSPd~ 379 (480)
T KOG0271|consen 305 GAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKS-----KKPITRMTGHQALVNHVSFSPDG 379 (480)
T ss_pred cccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccc-----ccchhhhhchhhheeeEEECCCc
Confidence 2 12346999999999999998763 56899999999999999999999
Q ss_pred CcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEE
Q 021657 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQI 277 (309)
Q Consensus 198 ~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~v 277 (309)
++ +|+++.|..|++||.++ .+.+..+.+|-.+|+.++|+.|.. |++ ||+.|.++++
T Consensus 380 r~-IASaSFDkSVkLW~g~t---------------Gk~lasfRGHv~~VYqvawsaDsR-LlV-------S~SkDsTLKv 435 (480)
T KOG0271|consen 380 RY-IASASFDKSVKLWDGRT---------------GKFLASFRGHVAAVYQVAWSADSR-LLV-------SGSKDSTLKV 435 (480)
T ss_pred cE-EEEeecccceeeeeCCC---------------cchhhhhhhccceeEEEEeccCcc-EEE-------EcCCCceEEE
Confidence 96 68999999999999998 556778999999999999999665 566 4555599999
Q ss_pred EEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 278 WRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 278 w~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|+++ +.+....+.+|.+.|.++.|+|
T Consensus 436 w~V~------tkKl~~DLpGh~DEVf~vDwsp 461 (480)
T KOG0271|consen 436 WDVR------TKKLKQDLPGHADEVFAVDWSP 461 (480)
T ss_pred EEee------eeeecccCCCCCceEEEEEecC
Confidence 9999 7888999999999999999998
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.9e-44 Score=267.26 Aligned_cols=229 Identities=25% Similarity=0.482 Sum_probs=203.1
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.||.+ +|.|+.|+|+|..|+||+.|.++|+||+. +..
T Consensus 110 S~~GH~e-~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~----------------------------------------TeT 148 (480)
T KOG0271|consen 110 SIAGHGE-AVLSVQFSPTGSRLVTGSGDTTVRLWDLD----------------------------------------TET 148 (480)
T ss_pred ccCCCCC-cEEEEEecCCCceEEecCCCceEEeeccC----------------------------------------CCC
Confidence 5789999 89999999999999999999999999997 345
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC----CCCeEEEEcCC
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL----DDNLILTGSAD 158 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d 158 (309)
+..+.++|...|.|++|+||| ..||+|+.||+|++||..+++. ....+.+|...|++++|.|. ..++|++++.|
T Consensus 149 p~~t~KgH~~WVlcvawsPDg-k~iASG~~dg~I~lwdpktg~~-~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 149 PLFTCKGHKNWVLCVAWSPDG-KKIASGSKDGSIRLWDPKTGQQ-IGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred cceeecCCccEEEEEEECCCc-chhhccccCCeEEEecCCCCCc-ccccccCcccceeEEeecccccCCCccceecccCC
Confidence 677889999999999999999 8899999999999999988874 67788999999999999762 45799999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
|.|+|||+.. +.++..+.+|..+|+|+.|--+| ++++|+.|++|++|+... ..++..
T Consensus 227 g~vrIWd~~~------~~~~~~lsgHT~~VTCvrwGG~g--liySgS~DrtIkvw~a~d---------------G~~~r~ 283 (480)
T KOG0271|consen 227 GSVRIWDTKL------GTCVRTLSGHTASVTCVRWGGEG--LIYSGSQDRTIKVWRALD---------------GKLCRE 283 (480)
T ss_pred CCEEEEEccC------ceEEEEeccCccceEEEEEcCCc--eEEecCCCceEEEEEccc---------------hhHHHh
Confidence 9999999998 89999999999999999998777 678999999999999987 556778
Q ss_pred ecCCCcceeeEEEcc-----------CCC------------------------eEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 239 HAGHRDKVVDFHWNA-----------SDP------------------------WTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~-----------~~~------------------------~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
+.+|...|+.++.+. .+. ..++++|+| .++.+|+-..
T Consensus 284 lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd-------~tlflW~p~~- 355 (480)
T KOG0271|consen 284 LKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDD-------FTLFLWNPFK- 355 (480)
T ss_pred hcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCC-------ceEEEecccc-
Confidence 899999999999882 122 246666655 9999999874
Q ss_pred ccCChhhHhHhhhcccceEEEeeeCC
Q 021657 284 IYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 284 ~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+++..+.+|+.-|..+.|+|
T Consensus 356 ----~kkpi~rmtgHq~lVn~V~fSP 377 (480)
T KOG0271|consen 356 ----SKKPITRMTGHQALVNHVSFSP 377 (480)
T ss_pred ----cccchhhhhchhhheeeEEECC
Confidence 5679999999999999999998
No 4
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.9e-43 Score=254.74 Aligned_cols=267 Identities=18% Similarity=0.303 Sum_probs=216.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
++|+||.+ .|.++.|++|.++|+++|.||.+.|||.-+.......... ..+............ .-+....+++
T Consensus 49 r~LkGH~~-Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcG--GLdN~Csiy~ 125 (343)
T KOG0286|consen 49 RTLKGHLN-KIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACG--GLDNKCSIYP 125 (343)
T ss_pred EEeccccc-ceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEec--CcCceeEEEe
Confidence 58999999 8999999999999999999999999998765333222211 112222222222222 2233333333
Q ss_pred CCCc------CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCe
Q 021657 78 GPSV------GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 78 ~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 151 (309)
+.+. +..+.+.+|++.+.|+.|.+++ .|+|++.|.+..+||+++++ ....+.+|.+.|.++.++|.+++.
T Consensus 126 ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~--~ilT~SGD~TCalWDie~g~--~~~~f~GH~gDV~slsl~p~~~nt 201 (343)
T KOG0286|consen 126 LSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN--HILTGSGDMTCALWDIETGQ--QTQVFHGHTGDVMSLSLSPSDGNT 201 (343)
T ss_pred cccccccccceeeeeecCccceeEEEEEcCCC--ceEecCCCceEEEEEcccce--EEEEecCCcccEEEEecCCCCCCe
Confidence 3322 3456689999999999998865 69999999999999999999 788999999999999999988999
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
|++|+.|+..++||+|. +..+++|.+|...|++++|.|+|.- |++|++|+++++||+|...+.
T Consensus 202 FvSg~cD~~aklWD~R~------~~c~qtF~ghesDINsv~ffP~G~a-fatGSDD~tcRlyDlRaD~~~---------- 264 (343)
T KOG0286|consen 202 FVSGGCDKSAKLWDVRS------GQCVQTFEGHESDINSVRFFPSGDA-FATGSDDATCRLYDLRADQEL---------- 264 (343)
T ss_pred EEecccccceeeeeccC------cceeEeecccccccceEEEccCCCe-eeecCCCceeEEEeecCCcEE----------
Confidence 99999999999999999 8999999999999999999999995 789999999999999983322
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.++....-..+|++++|+..|..|+ +|..|..+.+||.- .++.+..+.+|.+.|.++..+|
T Consensus 265 ---a~ys~~~~~~gitSv~FS~SGRlLf--------agy~d~~c~vWDtl------k~e~vg~L~GHeNRvScl~~s~ 325 (343)
T KOG0286|consen 265 ---AVYSHDSIICGITSVAFSKSGRLLF--------AGYDDFTCNVWDTL------KGERVGVLAGHENRVSCLGVSP 325 (343)
T ss_pred ---eeeccCcccCCceeEEEcccccEEE--------eeecCCceeEeecc------ccceEEEeeccCCeeEEEEECC
Confidence 2333344456899999999888777 66667999999998 7888999999999999998876
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.1e-44 Score=271.59 Aligned_cols=245 Identities=22% Similarity=0.314 Sum_probs=214.9
Q ss_pred CcccCCCCCcceEEEEECCC--CCEEEEecCCCcEEEEeCCccccccc--cCCccccccCCCCceeecCCCCCCCCcccC
Q 021657 1 MEILTGHQDNAEFALAMCPT--EPYVLSGGKDKSVVLWSIQDHITSSA--TDPATAKSAGSSGSIIKQSPKPGDGNDKAA 76 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~--~~~l~t~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (309)
+++|+||++ .|.++.|+|. +..||||+.||++++|++.+...... .+...............+.++..+...++|
T Consensus 210 ~~~l~gH~~-~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlW 288 (459)
T KOG0272|consen 210 LQTLRGHTS-RVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLW 288 (459)
T ss_pred eEEEecccc-ceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhc
Confidence 468999999 8999999996 56899999999999999987533222 222222333334445567778889999999
Q ss_pred CCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 77 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
|..+...+...++|...|.+++|.|+| .+++||+.|..-+|||+++++ .+..+.+|..+|.+|+|+| +|..+|+|+
T Consensus 289 D~~tk~ElL~QEGHs~~v~~iaf~~DG-SL~~tGGlD~~~RvWDlRtgr--~im~L~gH~k~I~~V~fsP-NGy~lATgs 364 (459)
T KOG0272|consen 289 DLETKSELLLQEGHSKGVFSIAFQPDG-SLAATGGLDSLGRVWDLRTGR--CIMFLAGHIKEILSVAFSP-NGYHLATGS 364 (459)
T ss_pred ccccchhhHhhcccccccceeEecCCC-ceeeccCccchhheeecccCc--EEEEecccccceeeEeECC-CceEEeecC
Confidence 999999999999999999999999999 899999999999999999999 7889999999999999999 999999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
.|++++|||++. .+.+..+.+|..-|+.+.|+|+..++|++++.|++++||..+. ..++
T Consensus 365 ~Dnt~kVWDLR~------r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~---------------~~~~ 423 (459)
T KOG0272|consen 365 SDNTCKVWDLRM------RSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRT---------------WSPL 423 (459)
T ss_pred CCCcEEEeeecc------cccceecccccchhhheEecccCCeEEEEcccCcceeeecCCC---------------cccc
Confidence 999999999999 7889999999999999999996666788999999999999988 5677
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
..+.||.+.|.++.++|++..++ |++.|.++++|.
T Consensus 424 ksLaGHe~kV~s~Dis~d~~~i~--------t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 424 KSLAGHEGKVISLDISPDSQAIA--------TSSFDRTIKLWR 458 (459)
T ss_pred hhhcCCccceEEEEeccCCceEE--------EeccCceeeecc
Confidence 88999999999999999988766 666669999995
No 6
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.9e-43 Score=285.58 Aligned_cols=208 Identities=29% Similarity=0.589 Sum_probs=190.4
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
++|-||.+ +|+.+.|+|+.++|+++|+|+++|+|.+.+ .
T Consensus 445 ~~L~GH~G-PVyg~sFsPd~rfLlScSED~svRLWsl~t----------------------------------------~ 483 (707)
T KOG0263|consen 445 RTLYGHSG-PVYGCSFSPDRRFLLSCSEDSSVRLWSLDT----------------------------------------W 483 (707)
T ss_pred EEeecCCC-ceeeeeecccccceeeccCCcceeeeeccc----------------------------------------c
Confidence 46889999 999999999999999999999999999984 3
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
..+-.+.+|..+|+++.|+|.| .+|||++.|++.++|...... ..+.+.+|-+.|.|+.|+| +.+++++|+.|.++
T Consensus 484 s~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~~--PlRifaghlsDV~cv~FHP-Ns~Y~aTGSsD~tV 559 (707)
T KOG0263|consen 484 SCLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHNK--PLRIFAGHLSDVDCVSFHP-NSNYVATGSSDRTV 559 (707)
T ss_pred eeEEEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccCC--chhhhcccccccceEEECC-cccccccCCCCceE
Confidence 3455667999999999999998 999999999999999987766 7888999999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
|+||+.+ +..++.|.+|.++|.+++|+|+|++ ||+|+.||.|.+||+.. ..++..+.+
T Consensus 560 RlWDv~~------G~~VRiF~GH~~~V~al~~Sp~Gr~-LaSg~ed~~I~iWDl~~---------------~~~v~~l~~ 617 (707)
T KOG0263|consen 560 RLWDVST------GNSVRIFTGHKGPVTALAFSPCGRY-LASGDEDGLIKIWDLAN---------------GSLVKQLKG 617 (707)
T ss_pred EEEEcCC------CcEEEEecCCCCceEEEEEcCCCce-EeecccCCcEEEEEcCC---------------Ccchhhhhc
Confidence 9999999 9999999999999999999999997 68999999999999998 556778899
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
|.+.|.++.|+.+|..|+ +||.|.+|++||+....
T Consensus 618 Ht~ti~SlsFS~dg~vLa--------sgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 618 HTGTIYSLSFSRDGNVLA--------SGGADNSVRLWDLTKVI 652 (707)
T ss_pred ccCceeEEEEecCCCEEE--------ecCCCCeEEEEEchhhc
Confidence 999999999999888666 67777999999987543
No 7
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-42 Score=244.50 Aligned_cols=231 Identities=24% Similarity=0.372 Sum_probs=203.0
Q ss_pred cccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.+|+||++ .|+.++..+. ...+++++.|.++.+|++... +...
T Consensus 9 ~tl~gh~d-~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~d-----------------------------------d~~~ 52 (315)
T KOG0279|consen 9 GTLEGHTD-WVTALAIKIKNSDILVSASRDKTIIVWKLTSD-----------------------------------DIKY 52 (315)
T ss_pred eeecCCCc-eEEEEEeecCCCceEEEcccceEEEEEEeccC-----------------------------------cccc
Confidence 47899999 9999999986 567889999999999999753 3345
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
+.+++.+.+|...|..+..+++| +++++++.|+++++||+.+++ ..+.+.+|...|.+++|+| +...+++|+.|.+
T Consensus 53 G~~~r~~~GHsH~v~dv~~s~dg-~~alS~swD~~lrlWDl~~g~--~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkT 128 (315)
T KOG0279|consen 53 GVPVRRLTGHSHFVSDVVLSSDG-NFALSASWDGTLRLWDLATGE--STRRFVGHTKDVLSVAFST-DNRQIVSGSRDKT 128 (315)
T ss_pred CceeeeeeccceEecceEEccCC-ceEEeccccceEEEEEecCCc--EEEEEEecCCceEEEEecC-CCceeecCCCcce
Confidence 66788999999999999999999 899999999999999999987 7888999999999999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccC--CCCeeEEEEecCC-CcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGH--SAAVLCVQWSPDK-SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~-~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
|.+|+... .+..++... ...|+++.|+|+. +-++++++.|+++++||+++ .+...
T Consensus 129 iklwnt~g-------~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~---------------~~l~~ 186 (315)
T KOG0279|consen 129 IKLWNTLG-------VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN---------------CQLRT 186 (315)
T ss_pred eeeeeecc-------cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC---------------cchhh
Confidence 99999884 455555433 7889999999983 33577999999999999998 45566
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+.+|+..++.++++|||...+ +||.||.+.+||++ +++.+..+. |...|.+++|+|
T Consensus 187 ~~~gh~~~v~t~~vSpDGslca--------sGgkdg~~~LwdL~------~~k~lysl~-a~~~v~sl~fsp 243 (315)
T KOG0279|consen 187 TFIGHSGYVNTVTVSPDGSLCA--------SGGKDGEAMLWDLN------EGKNLYSLE-AFDIVNSLCFSP 243 (315)
T ss_pred ccccccccEEEEEECCCCCEEe--------cCCCCceEEEEEcc------CCceeEecc-CCCeEeeEEecC
Confidence 7889999999999999998666 88888999999999 788888776 789999999998
No 8
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=5e-42 Score=257.81 Aligned_cols=226 Identities=26% Similarity=0.527 Sum_probs=199.9
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+++|.. +|+++.|++++.++++|+.+|.|++|+..- .
T Consensus 133 ilQaHDs-~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm-----------------------------------------n 170 (464)
T KOG0284|consen 133 ILQAHDS-PVRTMKWSHNGTWMISGDKGGMIKYWQPNM-----------------------------------------N 170 (464)
T ss_pred Hhhhhcc-cceeEEEccCCCEEEEcCCCceEEecccch-----------------------------------------h
Confidence 5788999 999999999999999999999999999752 2
Q ss_pred ccccccccc-CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 83 PRGIYNGHE-DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 83 ~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.++.+..|. ..|++++|+|++ ..|++|++||+|+|||....+ ....+.+|.-.|.+++|+| ...++++|+.|..|
T Consensus 171 nVk~~~ahh~eaIRdlafSpnD-skF~t~SdDg~ikiWdf~~~k--ee~vL~GHgwdVksvdWHP-~kgLiasgskDnlV 246 (464)
T KOG0284|consen 171 NVKIIQAHHAEAIRDLAFSPND-SKFLTCSDDGTIKIWDFRMPK--EERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLV 246 (464)
T ss_pred hhHHhhHhhhhhhheeccCCCC-ceeEEecCCCeEEEEeccCCc--hhheeccCCCCcceeccCC-ccceeEEccCCcee
Confidence 344455554 899999999987 789999999999999998777 4556689999999999999 89999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++||.++ +.++.++..|+..|..+.|+|++.+ |++++.|..+++||++. ...++.+++
T Consensus 247 KlWDprS------g~cl~tlh~HKntVl~~~f~~n~N~-Llt~skD~~~kv~DiR~---------------mkEl~~~r~ 304 (464)
T KOG0284|consen 247 KLWDPRS------GSCLATLHGHKNTVLAVKFNPNGNW-LLTGSKDQSCKVFDIRT---------------MKELFTYRG 304 (464)
T ss_pred EeecCCC------cchhhhhhhccceEEEEEEcCCCCe-eEEccCCceEEEEehhH---------------hHHHHHhhc
Confidence 9999999 9999999999999999999999986 56999999999999997 345678899
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh-hcccceEEEeeeCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL-EKFKAHVISCTSKP 309 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~P 309 (309)
|...|++++|+|-...|++ +||.||.|..|.+. ..+++.++ .+|...|++++|||
T Consensus 305 Hkkdv~~~~WhP~~~~lft-------sgg~Dgsvvh~~v~------~~~p~~~i~~AHd~~iwsl~~hP 360 (464)
T KOG0284|consen 305 HKKDVTSLTWHPLNESLFT-------SGGSDGSVVHWVVG------LEEPLGEIPPAHDGEIWSLAYHP 360 (464)
T ss_pred chhhheeecccccccccee-------eccCCCceEEEecc------ccccccCCCcccccceeeeeccc
Confidence 9999999999998888887 66666999999998 45555555 48999999999998
No 9
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=233.34 Aligned_cols=214 Identities=24% Similarity=0.444 Sum_probs=180.0
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
++.|+||.- .|..+..++||++.++++.|+++|+||+.+
T Consensus 56 ~r~~~GHsH-~v~dv~~s~dg~~alS~swD~~lrlWDl~~---------------------------------------- 94 (315)
T KOG0279|consen 56 VRRLTGHSH-FVSDVVLSSDGNFALSASWDGTLRLWDLAT---------------------------------------- 94 (315)
T ss_pred eeeeeccce-EecceEEccCCceEEeccccceEEEEEecC----------------------------------------
Confidence 467999999 999999999999999999999999999984
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCC-CCeEEEEcCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLD-DNLILTGSAD 158 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~~l~~~~~d 158 (309)
+++.+.|.+|...|.+++|++++ ..+++|+.|.+|++|++-... ...... .+.+.|+|++|+|.. ..++++++.|
T Consensus 95 g~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTiklwnt~g~c--k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~D 171 (315)
T KOG0279|consen 95 GESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTIKLWNTLGVC--KYTIHEDSHREWVSCVRFSPNESNPIIVSASWD 171 (315)
T ss_pred CcEEEEEEecCCceEEEEecCCC-ceeecCCCcceeeeeeecccE--EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCC
Confidence 45567889999999999999998 789999999999999987554 222222 237899999999932 6799999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+++++||+++ .+....+.+|.+.++.++++|||. +.++|+.||.+.+||++. .+.++.
T Consensus 172 ktvKvWnl~~------~~l~~~~~gh~~~v~t~~vSpDGs-lcasGgkdg~~~LwdL~~---------------~k~lys 229 (315)
T KOG0279|consen 172 KTVKVWNLRN------CQLRTTFIGHSGYVNTVTVSPDGS-LCASGGKDGEAMLWDLNE---------------GKNLYS 229 (315)
T ss_pred ceEEEEccCC------cchhhccccccccEEEEEECCCCC-EEecCCCCceEEEEEccC---------------CceeEe
Confidence 9999999999 888899999999999999999999 688999999999999998 223333
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
.+|...|.+++|+|+..+|.+.. +..|+|||+. .+.++.+++
T Consensus 230 -l~a~~~v~sl~fspnrywL~~at---------~~sIkIwdl~------~~~~v~~l~ 271 (315)
T KOG0279|consen 230 -LEAFDIVNSLCFSPNRYWLCAAT---------ATSIKIWDLE------SKAVVEELK 271 (315)
T ss_pred -ccCCCeEeeEEecCCceeEeecc---------CCceEEEecc------chhhhhhcc
Confidence 46888999999999765544322 2469999999 666666654
No 10
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=4.4e-40 Score=266.19 Aligned_cols=250 Identities=20% Similarity=0.375 Sum_probs=212.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.++|..|++|+.+||.|-.|-.|++|.+...... .......+........+......+.........+.+|
T Consensus 380 ~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~---------~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH 450 (707)
T KOG0263|consen 380 GVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLK---------KLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGH 450 (707)
T ss_pred cceeEeecCCcchhhccccccEEEEEecchhhhc---------cccchhhhccccccccchhhhhccccCCceeEEeecC
Confidence 4899999999999999999999999999743111 0011111111222222333444555555666779999
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
.++|..+.|+|+. ++|++|++|+++++|.+.+.. .....++|..+|..++|+| .|.+||+++.|++.++|....
T Consensus 451 ~GPVyg~sFsPd~-rfLlScSED~svRLWsl~t~s--~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs~d~-- 524 (707)
T KOG0263|consen 451 SGPVYGCSFSPDR-RFLLSCSEDSSVRLWSLDTWS--CLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWSTDH-- 524 (707)
T ss_pred CCceeeeeecccc-cceeeccCCcceeeeecccce--eEEEecCCCcceeeEEecC-CceEEEecCCCceeeeeeccc--
Confidence 9999999999998 899999999999999999888 6777889999999999999 999999999999999999998
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
..+++.+.+|-+.|.|++|+|+..+ +++|+.|.++++||+.+ ...+..+.||.++|.+++
T Consensus 525 ----~~PlRifaghlsDV~cv~FHPNs~Y-~aTGSsD~tVRlWDv~~---------------G~~VRiF~GH~~~V~al~ 584 (707)
T KOG0263|consen 525 ----NKPLRIFAGHLSDVDCVSFHPNSNY-VATGSSDRTVRLWDVST---------------GNSVRIFTGHKGPVTALA 584 (707)
T ss_pred ----CCchhhhcccccccceEEECCcccc-cccCCCCceEEEEEcCC---------------CcEEEEecCCCCceEEEE
Confidence 8899999999999999999999997 57999999999999998 556778899999999999
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|+|.|.+|+ +|+.||.|++||+. .++++.++.+|.+.|.++.|+.
T Consensus 585 ~Sp~Gr~La--------Sg~ed~~I~iWDl~------~~~~v~~l~~Ht~ti~SlsFS~ 629 (707)
T KOG0263|consen 585 FSPCGRYLA--------SGDEDGLIKIWDLA------NGSLVKQLKGHTGTIYSLSFSR 629 (707)
T ss_pred EcCCCceEe--------ecccCCcEEEEEcC------CCcchhhhhcccCceeEEEEec
Confidence 999988766 77777999999999 7899999999999999999974
No 11
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=3.3e-39 Score=233.67 Aligned_cols=235 Identities=22% Similarity=0.416 Sum_probs=193.4
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
..+.||++ .|+.+.|+|+|.+||||+.|..|.+|++.. ..
T Consensus 41 m~l~gh~g-eI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g---------------------------------------dc 80 (338)
T KOG0265|consen 41 MLLPGHKG-EIYTIKFHPDGSCFASGGSDRAIVLWNVYG---------------------------------------DC 80 (338)
T ss_pred hhcCCCcc-eEEEEEECCCCCeEeecCCcceEEEEeccc---------------------------------------cc
Confidence 45789999 999999999999999999999999999763 22
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+....+++|.++|..+.|.+++ ..+++++.|.+|+.||.++++ ....++.|...|+++.-+..+..++.+++.|+++
T Consensus 81 eN~~~lkgHsgAVM~l~~~~d~-s~i~S~gtDk~v~~wD~~tG~--~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~ 157 (338)
T KOG0265|consen 81 ENFWVLKGHSGAVMELHGMRDG-SHILSCGTDKTVRGWDAETGK--RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTL 157 (338)
T ss_pred cceeeeccccceeEeeeeccCC-CEEEEecCCceEEEEecccce--eeehhccccceeeecCccccCCeEEEecCCCceE
Confidence 2345567999999999999999 889999999999999999999 7888899999999998666456688889999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++||+|+ ...++++. .+.+++++.|..++..++ +|+-|+.|++||++. ....+.+.|
T Consensus 158 kl~D~R~------k~~~~t~~-~kyqltAv~f~d~s~qv~-sggIdn~ikvWd~r~---------------~d~~~~lsG 214 (338)
T KOG0265|consen 158 KLWDIRK------KEAIKTFE-NKYQLTAVGFKDTSDQVI-SGGIDNDIKVWDLRK---------------NDGLYTLSG 214 (338)
T ss_pred EEEeecc------cchhhccc-cceeEEEEEeccccccee-eccccCceeeecccc---------------CcceEEeec
Confidence 9999998 77777776 467899999999999865 999999999999987 345677788
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCC-------------------------------------------CCCCCCeEEEE
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCD-------------------------------------------STGGGGTLQIW 278 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~-------------------------------------------s~~~dg~v~vw 278 (309)
|.++|+.+..+|++.+++ +-++|+. +|+.|..+++|
T Consensus 215 h~DtIt~lsls~~gs~ll-snsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvw 293 (338)
T KOG0265|consen 215 HADTITGLSLSRYGSFLL-SNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVW 293 (338)
T ss_pred ccCceeeEEeccCCCccc-cccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEe
Confidence 888888888888777644 3333310 34445555555
Q ss_pred EccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 279 RMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|.. ....+..+.+|.+.|.+++|+|
T Consensus 294 d~~------~r~~lyklpGh~gsvn~~~Fhp 318 (338)
T KOG0265|consen 294 DTT------SRRILYKLPGHYGSVNEVDFHP 318 (338)
T ss_pred ecc------cccEEEEcCCcceeEEEeeecC
Confidence 554 4467778899999999999998
No 12
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=3.3e-40 Score=248.01 Aligned_cols=218 Identities=20% Similarity=0.409 Sum_probs=194.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+|..+.|.|+|+.|++|+..|.+.+|+... ......++.|
T Consensus 98 ~V~~v~WtPeGRRLltgs~SGEFtLWNg~~----------------------------------------fnFEtilQaH 137 (464)
T KOG0284|consen 98 PVNVVRWTPEGRRLLTGSQSGEFTLWNGTS----------------------------------------FNFETILQAH 137 (464)
T ss_pred ceeeEEEcCCCceeEeecccccEEEecCce----------------------------------------eeHHHHhhhh
Confidence 689999999999999999999999999742 2233456789
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc-CCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH-DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
..+|.++.|++++ ..+++|+.+|.|++|+.+... ++.+.+| ...|++++|+| +...|++++.||+|+|||.+.
T Consensus 138 Ds~Vr~m~ws~~g-~wmiSgD~gG~iKyWqpnmnn---Vk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~- 211 (464)
T KOG0284|consen 138 DSPVRTMKWSHNG-TWMISGDKGGMIKYWQPNMNN---VKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRM- 211 (464)
T ss_pred cccceeEEEccCC-CEEEEcCCCceEEecccchhh---hHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccC-
Confidence 9999999999999 899999999999999987665 4444454 48999999999 899999999999999999998
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
.+.-..+.+|.-.|.+++|+|... ++|+|+.|..|++||.++ ..++.++.+|...|.++
T Consensus 212 -----~kee~vL~GHgwdVksvdWHP~kg-LiasgskDnlVKlWDprS---------------g~cl~tlh~HKntVl~~ 270 (464)
T KOG0284|consen 212 -----PKEERVLRGHGWDVKSVDWHPTKG-LIASGSKDNLVKLWDPRS---------------GSCLATLHGHKNTVLAV 270 (464)
T ss_pred -----CchhheeccCCCCcceeccCCccc-eeEEccCCceeEeecCCC---------------cchhhhhhhccceEEEE
Confidence 677777899999999999999888 688999999999999998 66788899999999999
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.|+|++++|+ |++.|..++++|++ ..+.+..+++|+..|+++.|||
T Consensus 271 ~f~~n~N~Ll--------t~skD~~~kv~DiR------~mkEl~~~r~Hkkdv~~~~WhP 316 (464)
T KOG0284|consen 271 KFNPNGNWLL--------TGSKDQSCKVFDIR------TMKELFTYRGHKKDVTSLTWHP 316 (464)
T ss_pred EEcCCCCeeE--------EccCCceEEEEehh------HhHHHHHhhcchhhheeecccc
Confidence 9999997766 66666999999999 7888999999999999999998
No 13
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.4e-39 Score=238.70 Aligned_cols=265 Identities=23% Similarity=0.374 Sum_probs=225.7
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcc----ccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT----AKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+.||.. +|+.+-|+|+-..+++++.|++|++||..++.......... .......+ ..+...+.+-.+.+|+
T Consensus 102 ~~l~g~r~-~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~G--k~l~tcSsDl~~~LWd 178 (406)
T KOG0295|consen 102 QKLAGHRS-SVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASG--KYLATCSSDLSAKLWD 178 (406)
T ss_pred hhhhcccc-ceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCc--cEEEecCCccchhhee
Confidence 46778998 89999999999999999999999999999985533222211 11222222 3334444455589999
Q ss_pred CCC-cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 78 GPS-VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 78 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
..+ .+.++.+.+|...|.+++|-|.| .++++++.|.+|+.|++.++. .+..+.+|...|..++.+. +|.++++++
T Consensus 179 ~~~~~~c~ks~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg~--cv~t~~~h~ewvr~v~v~~-DGti~As~s 254 (406)
T KOG0295|consen 179 FDTFFRCIKSLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTGY--CVKTFPGHSEWVRMVRVNQ-DGTIIASCS 254 (406)
T ss_pred HHHHHHHHHHhcCcccceeeEEEEecC-CeeeecccccceeEEecccce--eEEeccCchHhEEEEEecC-CeeEEEecC
Confidence 877 67788889999999999999998 889999999999999999999 8999999999999999999 999999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecC--------------CCcEEEEecCCCcEEEEeCCcccccc
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD--------------KSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
.|.++++|-+.+ +++...+..|.-+|.+++|.|. +..++.+++.|++|++||+..
T Consensus 255 ~dqtl~vW~~~t------~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~t----- 323 (406)
T KOG0295|consen 255 NDQTLRVWVVAT------KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVST----- 323 (406)
T ss_pred CCceEEEEEecc------chhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccC-----
Confidence 999999999999 7788889999999999999873 223577999999999999998
Q ss_pred cCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceE
Q 021657 223 EQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHV 302 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v 302 (309)
..+++++.+|..+|..++|+|.|.+ ++++.+| +++++||++ ..+|+++++.|+.-|
T Consensus 324 ----------g~cL~tL~ghdnwVr~~af~p~Gky-i~ScaDD-------ktlrvwdl~------~~~cmk~~~ah~hfv 379 (406)
T KOG0295|consen 324 ----------GMCLFTLVGHDNWVRGVAFSPGGKY-ILSCADD-------KTLRVWDLK------NLQCMKTLEAHEHFV 379 (406)
T ss_pred ----------CeEEEEEecccceeeeeEEcCCCeE-EEEEecC-------CcEEEEEec------cceeeeccCCCccee
Confidence 6789999999999999999997765 5555555 999999999 799999999999999
Q ss_pred EEeeeC
Q 021657 303 ISCTSK 308 (309)
Q Consensus 303 ~~~~~~ 308 (309)
++++|+
T Consensus 380 t~lDfh 385 (406)
T KOG0295|consen 380 TSLDFH 385 (406)
T ss_pred EEEecC
Confidence 999987
No 14
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6e-39 Score=227.27 Aligned_cols=226 Identities=22% Similarity=0.384 Sum_probs=200.8
Q ss_pred ceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
.+..++|+++ ...+++++.||++++||+.. ...|+..+++
T Consensus 62 ~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~---------------------------------------~s~Pi~~~kE 102 (311)
T KOG0277|consen 62 GLFDVAWSENHENQVIAASGDGSLRLFDLTM---------------------------------------PSKPIHKFKE 102 (311)
T ss_pred ceeEeeecCCCcceEEEEecCceEEEeccCC---------------------------------------CCcchhHHHh
Confidence 5889999996 56788999999999999652 3457889999
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
|..+|.++.|++..+..+++++.|++|++|+...++ .+.++.+|...|+..+|+|..++++++++.|+.+++||++.+
T Consensus 103 H~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~--Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~ 180 (311)
T KOG0277|consen 103 HKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN--SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP 180 (311)
T ss_pred hhhheEEeccccccceeEEeeccCCceEeecCCCCc--ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC
Confidence 999999999999887889999999999999987776 688899999999999999988999999999999999999985
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
++.+. +..|...+.++.|+.-..+++++|+.|+.|++||+++.. .+++++.+|.-.|..+
T Consensus 181 -----gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r--------------~pl~eL~gh~~AVRkv 240 (311)
T KOG0277|consen 181 -----GKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR--------------TPLFELNGHGLAVRKV 240 (311)
T ss_pred -----CceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc--------------ccceeecCCceEEEEE
Confidence 55555 888999999999999999999999999999999999844 3467889999999999
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+|+|....+++++|.| -+++|||... +...+.+...|..-|..+.|++
T Consensus 241 k~Sph~~~lLaSasYD-------mT~riw~~~~-----~ds~~e~~~~HtEFv~g~Dws~ 288 (311)
T KOG0277|consen 241 KFSPHHASLLASASYD-------MTVRIWDPER-----QDSAIETVDHHTEFVCGLDWSL 288 (311)
T ss_pred ecCcchhhHhhhcccc-------ceEEeccccc-----chhhhhhhhccceEEecccccc
Confidence 9999999999977777 9999999983 5667788889999999999875
No 15
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.1e-38 Score=223.64 Aligned_cols=266 Identities=24% Similarity=0.326 Sum_probs=217.7
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc--ccCCCCceeecCCCCCCCCcccCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK--SAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+++|..|++ +|..+.|+-+|+|.+|++.|++||+|+...+.........-.. -.........+.....+..+.+|+.
T Consensus 10 ~~~l~~~qg-aV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 10 LSILDCAQG-AVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred ceeeccccc-ceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence 357889999 9999999999999999999999999999887555444332221 1222223344556677889999999
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.+++..+.+.+|.+.|+.++|+.+. ..+++|+.|.++++||.++....+++.+......|.++.. .+..+++|+.|
T Consensus 89 ~TGkv~Rr~rgH~aqVNtV~fNees-SVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v---~~heIvaGS~D 164 (307)
T KOG0316|consen 89 NTGKVDRRFRGHLAQVNTVRFNEES-SVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV---AEHEIVAGSVD 164 (307)
T ss_pred ccCeeeeecccccceeeEEEecCcc-eEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe---cccEEEeeccC
Confidence 9999999999999999999999987 8999999999999999998887788888888899999998 56889999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
|++|.||+|. +.....+- ..+|++++|+++++++| +++.|+++++.|-.+ .+++..
T Consensus 165 GtvRtydiR~------G~l~sDy~--g~pit~vs~s~d~nc~L-a~~l~stlrLlDk~t---------------GklL~s 220 (307)
T KOG0316|consen 165 GTVRTYDIRK------GTLSSDYF--GHPITSVSFSKDGNCSL-ASSLDSTLRLLDKET---------------GKLLKS 220 (307)
T ss_pred CcEEEEEeec------ceeehhhc--CCcceeEEecCCCCEEE-Eeeccceeeecccch---------------hHHHHH
Confidence 9999999998 76655554 56899999999999876 788899999999887 456667
Q ss_pred ecCCCcc--eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccce-EEEeeeCC
Q 021657 239 HAGHRDK--VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAH-VISCTSKP 309 (309)
Q Consensus 239 ~~~~~~~--v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~P 309 (309)
+.+|... -....++..... ++ +|+.||.|++||+. ....+..++.+... |.++++||
T Consensus 221 YkGhkn~eykldc~l~qsdth-V~-------sgSEDG~Vy~wdLv------d~~~~sk~~~~~~v~v~dl~~hp 280 (307)
T KOG0316|consen 221 YKGHKNMEYKLDCCLNQSDTH-VF-------SGSEDGKVYFWDLV------DETQISKLSVVSTVIVTDLSCHP 280 (307)
T ss_pred hcccccceeeeeeeeccccee-EE-------eccCCceEEEEEec------cceeeeeeccCCceeEEeeeccc
Confidence 7888754 345566665554 55 55555999999999 67788888888877 89999998
No 16
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=6.7e-39 Score=237.53 Aligned_cols=224 Identities=21% Similarity=0.438 Sum_probs=203.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.++||.+ -|.|+++.|-.++|+||+.|++++|||+.+ +
T Consensus 145 rVi~gHlg-WVr~vavdP~n~wf~tgs~DrtikIwDlat----------------------------------------g 183 (460)
T KOG0285|consen 145 RVISGHLG-WVRSVAVDPGNEWFATGSADRTIKIWDLAT----------------------------------------G 183 (460)
T ss_pred hhhhhccc-eEEEEeeCCCceeEEecCCCceeEEEEccc----------------------------------------C
Confidence 57899999 999999999999999999999999999984 4
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+....+.+|...|..+++++-. .++++++.|+.|+-||++..+ .+....+|-+.|.|++.+| .-..|++|+.|.++
T Consensus 184 ~LkltltGhi~~vr~vavS~rH-pYlFs~gedk~VKCwDLe~nk--vIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~ 259 (460)
T KOG0285|consen 184 QLKLTLTGHIETVRGVAVSKRH-PYLFSAGEDKQVKCWDLEYNK--VIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTI 259 (460)
T ss_pred eEEEeecchhheeeeeeecccC-ceEEEecCCCeeEEEechhhh--hHHHhccccceeEEEeccc-cceeEEecCCcceE
Confidence 5556788999999999999988 789999999999999999888 7888999999999999999 89999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
|+||+|+ ...+..+.+|..+|.++.+.|-...+ ++|+.|++|++||++. ......+..
T Consensus 260 RvWDiRt------r~~V~~l~GH~~~V~~V~~~~~dpqv-it~S~D~tvrlWDl~a---------------gkt~~tlt~ 317 (460)
T KOG0285|consen 260 RVWDIRT------RASVHVLSGHTNPVASVMCQPTDPQV-ITGSHDSTVRLWDLRA---------------GKTMITLTH 317 (460)
T ss_pred EEeeecc------cceEEEecCCCCcceeEEeecCCCce-EEecCCceEEEeeecc---------------CceeEeeec
Confidence 9999999 88999999999999999999988875 5999999999999998 445677888
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
|...|.+++.+|. .+++|++|.| .++-|++. .+..++.+.+|.+.|.+++.
T Consensus 318 hkksvral~lhP~-e~~fASas~d--------nik~w~~p------~g~f~~nlsgh~~iintl~~ 368 (460)
T KOG0285|consen 318 HKKSVRALCLHPK-ENLFASASPD--------NIKQWKLP------EGEFLQNLSGHNAIINTLSV 368 (460)
T ss_pred ccceeeEEecCCc-hhhhhccCCc--------cceeccCC------ccchhhccccccceeeeeee
Confidence 9999999999994 5678877776 89999999 78889999999999988764
No 17
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=100.00 E-value=1.5e-38 Score=242.24 Aligned_cols=238 Identities=42% Similarity=0.816 Sum_probs=205.7
Q ss_pred ccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+|.||++ .=++|+|++. .-.|++|+.|++|++||+...... ....
T Consensus 172 ~L~gH~~-eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~---------------------------------~~~~ 217 (422)
T KOG0264|consen 172 RLKGHEK-EGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKE---------------------------------DKVV 217 (422)
T ss_pred EEEeecc-cccccccccccceeEeeccCCCcEEEEeccccccC---------------------------------Cccc
Confidence 6889998 4589999995 457999999999999999743111 1123
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.+...+.+|...|.+++|++....+|++++.|+.+.|||+++...+......+|..+|.|++|+|.++..||+|+.|++|
T Consensus 218 ~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV 297 (422)
T KOG0264|consen 218 DPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTV 297 (422)
T ss_pred cceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcE
Confidence 45667889999999999999988999999999999999999644447778889999999999999889999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
.+||+|++ .+++.++.+|+..|.+|.|+|....+||+++.|+.+.|||+..-++.+. .......|..+++...|
T Consensus 298 ~LwDlRnL-----~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~-~eda~dgppEllF~HgG 371 (422)
T KOG0264|consen 298 ALWDLRNL-----NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQS-PEDAEDGPPELLFIHGG 371 (422)
T ss_pred EEeechhc-----ccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccC-hhhhccCCcceeEEecC
Confidence 99999997 5689999999999999999999999999999999999999998776654 33444567888999999
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP 287 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~ 287 (309)
|...|..+.|+|+.++.++|+++| +.+.||+..+..+.+
T Consensus 372 H~~kV~DfsWnp~ePW~I~SvaeD-------N~LqIW~~s~~i~~~ 410 (422)
T KOG0264|consen 372 HTAKVSDFSWNPNEPWTIASVAED-------NILQIWQMAENIYNP 410 (422)
T ss_pred cccccccccCCCCCCeEEEEecCC-------ceEEEeeccccccCc
Confidence 999999999999999999988888 999999998655443
No 18
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=6.4e-38 Score=221.48 Aligned_cols=234 Identities=17% Similarity=0.346 Sum_probs=198.8
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+.++.+|+. -|+++.|..+|+++.|||+||++||||++...
T Consensus 76 v~t~e~h~k-NVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~-------------------------------------- 116 (311)
T KOG0315|consen 76 VATFEGHTK-NVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLS-------------------------------------- 116 (311)
T ss_pred eeEEeccCC-ceEEEEEeecCeEEEecCCCceEEEEeccCcc--------------------------------------
Confidence 357899998 69999999999999999999999999998521
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
.+....|..+|+++..+|+. ..|++|..+|.|++||+..... ...........|.++...| +|.+++.+...|+
T Consensus 117 ---~qR~~~~~spVn~vvlhpnQ-teLis~dqsg~irvWDl~~~~c-~~~liPe~~~~i~sl~v~~-dgsml~a~nnkG~ 190 (311)
T KOG0315|consen 117 ---CQRNYQHNSPVNTVVLHPNQ-TELISGDQSGNIRVWDLGENSC-THELIPEDDTSIQSLTVMP-DGSMLAAANNKGN 190 (311)
T ss_pred ---cchhccCCCCcceEEecCCc-ceEEeecCCCcEEEEEccCCcc-ccccCCCCCcceeeEEEcC-CCcEEEEecCCcc
Confidence 12334577999999999987 7799999999999999987752 1222334456899999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
.++|++-..+......++.+++.|.+.+....+|||+++ ||+++.|.+++||+.+.+ ...-..+.
T Consensus 191 cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~-lat~ssdktv~iwn~~~~--------------~kle~~l~ 255 (311)
T KOG0315|consen 191 CYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKY-LATCSSDKTVKIWNTDDF--------------FKLELVLT 255 (311)
T ss_pred EEEEEccCCCccccceEhhheecccceEEEEEECCCCcE-EEeecCCceEEEEecCCc--------------eeeEEEee
Confidence 999999876555557788899999999999999999997 679999999999999984 12345678
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
+|+.++++++||-++.+|+ ||+.|+.+++|++. .++.++...+|.....|++..
T Consensus 256 gh~rWvWdc~FS~dg~Ylv--------Tassd~~~rlW~~~------~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 256 GHQRWVWDCAFSADGEYLV--------TASSDHTARLWDLS------AGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred cCCceEEeeeeccCccEEE--------ecCCCCceeecccc------cCceeeecCCcccccEEEEee
Confidence 9999999999999999887 88888999999999 788889999999888887753
No 19
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=7.8e-37 Score=218.43 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=205.5
Q ss_pred CcccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
++.++||++ .|+.++|+|- |..||||+.|+.||+|+...+ .
T Consensus 7 ~~~~~gh~~-r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~-------------------------------------~ 48 (312)
T KOG0645|consen 7 EQKLSGHKD-RVWSVAWHPGKGVILASCGTDKAVRIWSTSSG-------------------------------------D 48 (312)
T ss_pred EEeecCCCC-cEEEEEeccCCceEEEeecCCceEEEEecCCC-------------------------------------C
Confidence 367899999 8999999997 889999999999999998732 1
Q ss_pred CcCccccc-ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 80 SVGPRGIY-NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 80 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
+..+...+ .+|+..|.+++|+|.| ++|++++.|.++.||.-..++......+.+|...|.|++|++ +|++||++++|
T Consensus 49 s~~ck~vld~~hkrsVRsvAwsp~g-~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRD 126 (312)
T KOG0645|consen 49 SWTCKTVLDDGHKRSVRSVAWSPHG-RYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRD 126 (312)
T ss_pred cEEEEEeccccchheeeeeeecCCC-cEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCC
Confidence 11112222 4799999999999999 899999999999999988888778899999999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
..|-||.+..... ..++..++.|...|..+.|+|... ||++++.|++|++|+-...+ .-.+..+
T Consensus 127 KSVWiWe~deddE---fec~aVL~~HtqDVK~V~WHPt~d-lL~S~SYDnTIk~~~~~~dd------------dW~c~~t 190 (312)
T KOG0645|consen 127 KSVWIWEIDEDDE---FECIAVLQEHTQDVKHVIWHPTED-LLFSCSYDNTIKVYRDEDDD------------DWECVQT 190 (312)
T ss_pred CeEEEEEecCCCc---EEEEeeeccccccccEEEEcCCcc-eeEEeccCCeEEEEeecCCC------------CeeEEEE
Confidence 9999999985322 667888999999999999999877 67899999999999977412 1457788
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCC-----------------------------CCCCCCeEEEEEccccccCChh
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCD-----------------------------STGGGGTLQIWRMSDLIYRPQD 289 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~-----------------------------s~~~dg~v~vw~~~~~~~~~~~ 289 (309)
+.+|...|.+++|+|.|.. ++++++|.. |++.|+.|++|.-......|.-
T Consensus 191 l~g~~~TVW~~~F~~~G~r-l~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~ 269 (312)
T KOG0645|consen 191 LDGHENTVWSLAFDNIGSR-LVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSW 269 (312)
T ss_pred ecCccceEEEEEecCCCce-EEEecCCcceEeeeeccCcchhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchH
Confidence 9999999999999998865 566776621 5666666666666544444555
Q ss_pred hHhH-hhhcccceEEEeeeCC
Q 021657 290 EVLA-ELEKFKAHVISCTSKP 309 (309)
Q Consensus 290 ~~~~-~~~~h~~~v~~~~~~P 309 (309)
+.+. .-..|...|.+++|.|
T Consensus 270 ~l~~~~~~aHe~dVNsV~w~p 290 (312)
T KOG0645|consen 270 NLLAKKEGAHEVDVNSVQWNP 290 (312)
T ss_pred HHHHhhhcccccccceEEEcC
Confidence 5554 3457888999999987
No 20
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=8.3e-38 Score=251.19 Aligned_cols=234 Identities=27% Similarity=0.525 Sum_probs=206.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+.||++ .|.+++...+|.+|+||+.|.++++|.++++. ...
T Consensus 359 ~ii~GH~e-~vlSL~~~~~g~llat~sKD~svilWr~~~~~------------------------------------~~~ 401 (775)
T KOG0319|consen 359 QIIPGHTE-AVLSLDVWSSGDLLATGSKDKSVILWRLNNNC------------------------------------SKS 401 (775)
T ss_pred EEEeCchh-heeeeeecccCcEEEEecCCceEEEEEecCCc------------------------------------chh
Confidence 36789999 89999977788899999999999999985321 122
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc---ceEE----EeeccCCceeEEEeccCCCCeEEE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS---PVIK----VEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~----~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
.++....+|+..|.+++++..+..+|+++|.|+++++|++...+. +... ....|...|+|++++| +..++++
T Consensus 402 ~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT 480 (775)
T KOG0319|consen 402 LCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIAT 480 (775)
T ss_pred hhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEe
Confidence 345667899999999999988889999999999999999976221 1122 3457999999999999 9999999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
|+.|.+.++|++.+ ......+.+|...|.++.|+|..+ ++|+++.|++|+||.+.+ ..
T Consensus 481 ~SqDktaKiW~le~------~~l~~vLsGH~RGvw~V~Fs~~dq-~laT~SgD~TvKIW~is~---------------fS 538 (775)
T KOG0319|consen 481 GSQDKTAKIWDLEQ------LRLLGVLSGHTRGVWCVSFSKNDQ-LLATCSGDKTVKIWSIST---------------FS 538 (775)
T ss_pred cccccceeeecccC------ceEEEEeeCCccceEEEEeccccc-eeEeccCCceEEEEEecc---------------ce
Confidence 99999999999997 899999999999999999999988 678999999999999998 66
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
++.++.||...|..+.|-.++.+++ |++.||.|++|+++ +.+|+.++.+|.+.|++++-.|
T Consensus 539 ClkT~eGH~~aVlra~F~~~~~qli--------S~~adGliKlWnik------t~eC~~tlD~H~DrvWaL~~~~ 599 (775)
T KOG0319|consen 539 CLKTFEGHTSAVLRASFIRNGKQLI--------SAGADGLIKLWNIK------TNECEMTLDAHNDRVWALSVSP 599 (775)
T ss_pred eeeeecCccceeEeeeeeeCCcEEE--------eccCCCcEEEEecc------chhhhhhhhhccceeEEEeecC
Confidence 7889999999999999999999988 88888999999999 8999999999999999998765
No 21
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=4.1e-37 Score=235.40 Aligned_cols=218 Identities=23% Similarity=0.443 Sum_probs=195.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|++++|+.+|.+||+|+.||.+|+|+... .....+..|
T Consensus 237 dVT~L~Wn~~G~~LatG~~~G~~riw~~~G-----------------------------------------~l~~tl~~H 275 (524)
T KOG0273|consen 237 DVTSLDWNNDGTLLATGSEDGEARIWNKDG-----------------------------------------NLISTLGQH 275 (524)
T ss_pred CcceEEecCCCCeEEEeecCcEEEEEecCc-----------------------------------------hhhhhhhcc
Confidence 589999999999999999999999999853 355677889
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
.++|.++.|+..| .+|++++-|+++.+||..+++ ....+.-|..+-..+.|- +...|++++.|+.|+++.+..
T Consensus 276 kgPI~slKWnk~G-~yilS~~vD~ttilwd~~~g~--~~q~f~~~s~~~lDVdW~--~~~~F~ts~td~~i~V~kv~~-- 348 (524)
T KOG0273|consen 276 KGPIFSLKWNKKG-TYILSGGVDGTTILWDAHTGT--VKQQFEFHSAPALDVDWQ--SNDEFATSSTDGCIHVCKVGE-- 348 (524)
T ss_pred CCceEEEEEcCCC-CEEEeccCCccEEEEeccCce--EEEeeeeccCCccceEEe--cCceEeecCCCceEEEEEecC--
Confidence 9999999999999 899999999999999999888 667777788876788886 467899999999999999998
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
..|+.++.+|.++|++|.|+|.+. ||++++.|++++||.+.. ......+.+|+..|+.+.
T Consensus 349 ----~~P~~t~~GH~g~V~alk~n~tg~-LLaS~SdD~TlkiWs~~~---------------~~~~~~l~~Hskei~t~~ 408 (524)
T KOG0273|consen 349 ----DRPVKTFIGHHGEVNALKWNPTGS-LLASCSDDGTLKIWSMGQ---------------SNSVHDLQAHSKEIYTIK 408 (524)
T ss_pred ----CCcceeeecccCceEEEEECCCCc-eEEEecCCCeeEeeecCC---------------CcchhhhhhhccceeeEe
Confidence 889999999999999999999999 688999999999999887 455677899999999999
Q ss_pred EccCCC--------eEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 251 WNASDP--------WTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 251 ~~~~~~--------~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|+|+++ ..+++++.| ++|++||+. .+.++.+|..|+.+|.+++|+|
T Consensus 409 wsp~g~v~~n~~~~~~l~sas~d-------stV~lwdv~------~gv~i~~f~kH~~pVysvafS~ 462 (524)
T KOG0273|consen 409 WSPTGPVTSNPNMNLMLASASFD-------STVKLWDVE------SGVPIHTLMKHQEPVYSVAFSP 462 (524)
T ss_pred ecCCCCccCCCcCCceEEEeecC-------CeEEEEEcc------CCceeEeeccCCCceEEEEecC
Confidence 999764 356655555 999999999 7999999999999999999997
No 22
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=250.71 Aligned_cols=228 Identities=28% Similarity=0.501 Sum_probs=195.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+.+|.. .|++++|+|+++++++++.|++|+|||+.. ..
T Consensus 197 ~~l~~h~~-~v~~~~fs~d~~~l~s~s~D~tiriwd~~~---------------------------------------~~ 236 (456)
T KOG0266|consen 197 RELSGHTR-GVSDVAFSPDGSYLLSGSDDKTLRIWDLKD---------------------------------------DG 236 (456)
T ss_pred cccccccc-ceeeeEECCCCcEEEEecCCceEEEeeccC---------------------------------------CC
Confidence 56789999 899999999999999999999999999942 34
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
..++++.+|...|++++|+|++ +++++|+.|++|+|||+++++ +...+.+|...|++++|++ ++++|++++.|+.|
T Consensus 237 ~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~--~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d~~i 312 (456)
T KOG0266|consen 237 RNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGE--CVRKLKGHSDGISGLAFSP-DGNLLVSASYDGTI 312 (456)
T ss_pred eEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCe--EEEeeeccCCceEEEEECC-CCCEEEEcCCCccE
Confidence 5577889999999999999999 999999999999999999987 8899999999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCC--ceeeeccCCCC--eeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 162 RMFDRRNLTSNGVGS--PINKFEGHSAA--VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~--~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
++||+.+ +. ++..+..+... +++++|+|++.++ +++..|+.+++||++. .....
T Consensus 313 ~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~fsp~~~~l-l~~~~d~~~~~w~l~~---------------~~~~~ 370 (456)
T KOG0266|consen 313 RVWDLET------GSKLCLKLLSGAENSAPVTSVQFSPNGKYL-LSASLDRTLKLWDLRS---------------GKSVG 370 (456)
T ss_pred EEEECCC------CceeeeecccCCCCCCceeEEEECCCCcEE-EEecCCCeEEEEEccC---------------Cccee
Confidence 9999998 66 45666665554 9999999999985 5999999999999998 33444
Q ss_pred eecCCCcc---eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc-cceEEEeeeCC
Q 021657 238 QHAGHRDK---VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF-KAHVISCTSKP 309 (309)
Q Consensus 238 ~~~~~~~~---v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~P 309 (309)
...+|... +.+...++.+.+++ +|+.|+.|++|++. ++..+..+.+| ...+..++++|
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~i~--------sg~~d~~v~~~~~~------s~~~~~~l~~h~~~~~~~~~~~~ 432 (456)
T KOG0266|consen 371 TYTGHSNLVRCIFSPTLSTGGKLIY--------SGSEDGSVYVWDSS------SGGILQRLEGHSKAAVSDLSSHP 432 (456)
T ss_pred eecccCCcceeEecccccCCCCeEE--------EEeCCceEEEEeCC------ccchhhhhcCCCCCceeccccCC
Confidence 55666553 34445566666555 56666999999999 78889999999 88999998886
No 23
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=220.03 Aligned_cols=235 Identities=22% Similarity=0.345 Sum_probs=195.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCc--------eeecCCCCCCCCcccCCCCCcC
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS--------IIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
-|..++|+|.|+++|+|+-|+...||++............. ........ ...+.+++++....+||+++++
T Consensus 99 WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r-~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~ 177 (343)
T KOG0286|consen 99 WVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSR-ELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQ 177 (343)
T ss_pred eEEEEEECCCCCeEEecCcCceeEEEecccccccccceeee-eecCccceeEEEEEcCCCceEecCCCceEEEEEcccce
Confidence 58899999999999999999999999998541111111000 00000000 2234456778899999999999
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.+..+.+|.+.|.++.++|...+.|++|+-|+..+|||++.+. ..+.+.+|...|++++|.| +|.-|++|+.|++.|
T Consensus 178 ~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~--c~qtF~ghesDINsv~ffP-~G~afatGSDD~tcR 254 (343)
T KOG0286|consen 178 QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQ--CVQTFEGHESDINSVRFFP-SGDAFATGSDDATCR 254 (343)
T ss_pred EEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcc--eeEeecccccccceEEEcc-CCCeeeecCCCceeE
Confidence 9999999999999999999444899999999999999999998 8999999999999999999 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeecc--CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 163 MFDRRNLTSNGVGSPINKFEG--HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+||+|. .+.+..+.. -..+|++++|+..|+.| .+|..|..+.+||.-+ .+.+..+.
T Consensus 255 lyDlRa------D~~~a~ys~~~~~~gitSv~FS~SGRlL-fagy~d~~c~vWDtlk---------------~e~vg~L~ 312 (343)
T KOG0286|consen 255 LYDLRA------DQELAVYSHDSIICGITSVAFSKSGRLL-FAGYDDFTCNVWDTLK---------------GERVGVLA 312 (343)
T ss_pred EEeecC------CcEEeeeccCcccCCceeEEEcccccEE-EeeecCCceeEeeccc---------------cceEEEee
Confidence 999999 677777753 34679999999999965 4888999999999877 45677888
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
+|..+|.++..+|+|.-+. ||++|..++||.
T Consensus 313 GHeNRvScl~~s~DG~av~--------TgSWDs~lriW~ 343 (343)
T KOG0286|consen 313 GHENRVSCLGVSPDGMAVA--------TGSWDSTLRIWA 343 (343)
T ss_pred ccCCeeEEEEECCCCcEEE--------ecchhHheeecC
Confidence 9999999999999887655 777889999994
No 24
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=5.8e-38 Score=240.69 Aligned_cols=243 Identities=24% Similarity=0.426 Sum_probs=204.4
Q ss_pred cccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.++.||+. .|+++.|.| .+.+|++++.|+.|+||++-. .
T Consensus 208 ~~~~gH~k-gvsai~~fp~~~hLlLS~gmD~~vklW~vy~---------------------------------------~ 247 (503)
T KOG0282|consen 208 HNLSGHTK-GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD---------------------------------------D 247 (503)
T ss_pred eeccCCcc-ccchhhhccceeeEEEecCCCceEEEEEEec---------------------------------------C
Confidence 57899999 799999999 889999999999999999873 5
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
.++++++.+|..+|.+++|+++| ..|++++.|+.|++||+++++ +...+. ....++|+.|+|++.+.|++|+.|+.
T Consensus 248 ~~~lrtf~gH~k~Vrd~~~s~~g-~~fLS~sfD~~lKlwDtETG~--~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~k 323 (503)
T KOG0282|consen 248 RRCLRTFKGHRKPVRDASFNNCG-TSFLSASFDRFLKLWDTETGQ--VLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKK 323 (503)
T ss_pred cceehhhhcchhhhhhhhccccC-Ceeeeeecceeeeeeccccce--EEEEEe-cCCCceeeecCCCCCcEEEEecCCCc
Confidence 66788999999999999999999 789999999999999999999 555553 35678999999955599999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC-------c----
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT-------T---- 229 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~---- 229 (309)
|+.||+|+ ++.++++..|-+.|+.+.|-++|++ +++.++|+.++||+.+..-......... .
T Consensus 324 i~~wDiRs------~kvvqeYd~hLg~i~~i~F~~~g~r-FissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~ 396 (503)
T KOG0282|consen 324 IRQWDIRS------GKVVQEYDRHLGAILDITFVDEGRR-FISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPN 396 (503)
T ss_pred EEEEeccc------hHHHHHHHhhhhheeeeEEccCCce-EeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCC
Confidence 99999999 9999999999999999999999998 5699999999999988733221111000 0
Q ss_pred --------------------CCCCceeeeecCCC--cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC
Q 021657 230 --------------------NYPAGLFFQHAGHR--DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP 287 (309)
Q Consensus 230 --------------------~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~ 287 (309)
..+......+.+|. +.-..+.|||++.+|+ +|..||.+.+||.+
T Consensus 397 ~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~--------SGdsdG~v~~wdwk------ 462 (503)
T KOG0282|consen 397 GKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLC--------SGDSDGKVNFWDWK------ 462 (503)
T ss_pred CCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEE--------eecCCccEEEeech------
Confidence 01111223345664 3567899999999877 88888999999999
Q ss_pred hhhHhHhhhcccceEEEeeeCC
Q 021657 288 QDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 288 ~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+.+.+..++.|.+++..+.|||
T Consensus 463 t~kl~~~lkah~~~ci~v~wHP 484 (503)
T KOG0282|consen 463 TTKLVSKLKAHDQPCIGVDWHP 484 (503)
T ss_pred hhhhhhccccCCcceEEEEecC
Confidence 8999999999999999999998
No 25
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.1e-37 Score=243.29 Aligned_cols=268 Identities=19% Similarity=0.292 Sum_probs=224.7
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc--ccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK--SAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
+++..|.+ .|.++.|+|...+++++-..|.|.|||.++......+...... ....-....-+..++.+..+++++..
T Consensus 7 rk~~~rSd-RVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn 85 (794)
T KOG0276|consen 7 RKFQSRSD-RVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN 85 (794)
T ss_pred hHhhccCC-ceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecc
Confidence 45667888 8999999999999999999999999999987444333322211 11111122234457789999999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
+.+.+..+..|..-|.+++.+|.. .+++++++|-+|++||.+.. ..+.+.+.+|..-|++++|+|.+.+.|++++.|+
T Consensus 86 t~ekV~~FeAH~DyIR~iavHPt~-P~vLtsSDDm~iKlW~we~~-wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDr 163 (794)
T KOG0276|consen 86 TGEKVKTFEAHSDYIRSIAVHPTL-PYVLTSSDDMTIKLWDWENE-WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDR 163 (794)
T ss_pred cceeeEEeeccccceeeeeecCCC-CeEEecCCccEEEEeeccCc-eeeeeEEcCcceEEEEEEecCCCccceeeeeccc
Confidence 999999999999999999999998 78999999999999999644 4578899999999999999999999999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC--CcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK--SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+|++|.+.+ ..+..++++|...|+++.+-+-| ++| ++|++|.+++|||..+ ..++.
T Consensus 164 TVKVWslgs------~~~nfTl~gHekGVN~Vdyy~~gdkpyl-IsgaDD~tiKvWDyQt---------------k~CV~ 221 (794)
T KOG0276|consen 164 TVKVWSLGS------PHPNFTLEGHEKGVNCVDYYTGGDKPYL-ISGADDLTIKVWDYQT---------------KSCVQ 221 (794)
T ss_pred cEEEEEcCC------CCCceeeeccccCcceEEeccCCCcceE-EecCCCceEEEeecch---------------HHHHH
Confidence 999999998 78889999999999999998744 665 5999999999999998 67888
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
++.||...|..+.|+|.-+.++ ||+.||+++||+.. +-+...++.---++|++++-.
T Consensus 222 TLeGHt~Nvs~v~fhp~lpiii--------sgsEDGTvriWhs~------Ty~lE~tLn~gleRvW~I~~~ 278 (794)
T KOG0276|consen 222 TLEGHTNNVSFVFFHPELPIII--------SGSEDGTVRIWNSK------TYKLEKTLNYGLERVWCIAAH 278 (794)
T ss_pred HhhcccccceEEEecCCCcEEE--------EecCCccEEEecCc------ceehhhhhhcCCceEEEEeec
Confidence 9999999999999999888655 66666999999998 566666676666788888743
No 26
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=3.5e-36 Score=230.36 Aligned_cols=245 Identities=22% Similarity=0.402 Sum_probs=208.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCC-ceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSG-SIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.+|.-|++ +|.++.|+.+|.||++++.||++.+||..++.....+........+... ....+.....++.+.++.+..
T Consensus 270 ~tl~~Hkg-PI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~ 348 (524)
T KOG0273|consen 270 STLGQHKG-PIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGE 348 (524)
T ss_pred hhhhccCC-ceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecC
Confidence 46778999 9999999999999999999999999999888666666554444332222 233455556678899999999
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC--------CCCeE
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL--------DDNLI 152 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~l 152 (309)
.+|+.++.+|.++|.++.|+|.+ .+|++++.|++++||+..... ....+.+|...|+.+.|+|. .+..+
T Consensus 349 ~~P~~t~~GH~g~V~alk~n~tg-~LLaS~SdD~TlkiWs~~~~~--~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l 425 (524)
T KOG0273|consen 349 DRPVKTFIGHHGEVNALKWNPTG-SLLASCSDDGTLKIWSMGQSN--SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLML 425 (524)
T ss_pred CCcceeeecccCceEEEEECCCC-ceEEEecCCCeeEeeecCCCc--chhhhhhhccceeeEeecCCCCccCCCcCCceE
Confidence 99999999999999999999999 899999999999999987766 78889999999999999983 24589
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
++++.|++|++||+.. +.++..|..|..+|.+++|+|+|++ +|+|+.||.|.+|+++.
T Consensus 426 ~sas~dstV~lwdv~~------gv~i~~f~kH~~pVysvafS~~g~y-lAsGs~dg~V~iws~~~--------------- 483 (524)
T KOG0273|consen 426 ASASFDSTVKLWDVES------GVPIHTLMKHQEPVYSVAFSPNGRY-LASGSLDGCVHIWSTKT--------------- 483 (524)
T ss_pred EEeecCCeEEEEEccC------CceeEeeccCCCceEEEEecCCCcE-EEecCCCCeeEeccccc---------------
Confidence 9999999999999999 9999999999999999999999997 68999999999999998
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+++..+. -...|..+.|+.+|.++.++.++ +.+++-|++
T Consensus 484 ~~l~~s~~-~~~~Ifel~Wn~~G~kl~~~~sd--------~~vcvldlr 523 (524)
T KOG0273|consen 484 GKLVKSYQ-GTGGIFELCWNAAGDKLGACASD--------GSVCVLDLR 523 (524)
T ss_pred hheeEeec-CCCeEEEEEEcCCCCEEEEEecC--------CCceEEEec
Confidence 33444444 45669999999999988866655 789998875
No 27
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=6.8e-36 Score=211.27 Aligned_cols=229 Identities=16% Similarity=0.332 Sum_probs=190.4
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
|.++.|+.+++.|+++.||+++. -.||+||+.+. +..++..
T Consensus 38 h~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~--------------------------------------np~Pv~t 78 (311)
T KOG0315|consen 38 HPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSN--------------------------------------NPNPVAT 78 (311)
T ss_pred cCccceeeEEEcCCcchhhhccC-CeeEEEEccCC--------------------------------------CCCceeE
Confidence 66668999999999999998875 58999999853 3447889
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
+.+|+..|+.+.|..+| +.+++|++||+++|||++... ......|..+|+++..+| +...|++|..+|.|++||+
T Consensus 79 ~e~h~kNVtaVgF~~dg-rWMyTgseDgt~kIWdlR~~~---~qR~~~~~spVn~vvlhp-nQteLis~dqsg~irvWDl 153 (311)
T KOG0315|consen 79 FEGHTKNVTAVGFQCDG-RWMYTGSEDGTVKIWDLRSLS---CQRNYQHNSPVNTVVLHP-NQTELISGDQSGNIRVWDL 153 (311)
T ss_pred EeccCCceEEEEEeecC-eEEEecCCCceEEEEeccCcc---cchhccCCCCcceEEecC-CcceEEeecCCCcEEEEEc
Confidence 99999999999999999 999999999999999999855 444456789999999999 9999999999999999999
Q ss_pred CCCCCCCCCCceeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcc
Q 021657 167 RNLTSNGVGSPINKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDK 245 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
++ ..+...+. .....|.++...|||.. ++++..-|.+++|++-. .+. ..+..++.+++.|+..
T Consensus 154 ~~------~~c~~~liPe~~~~i~sl~v~~dgsm-l~a~nnkG~cyvW~l~~-~~~--------~s~l~P~~k~~ah~~~ 217 (311)
T KOG0315|consen 154 GE------NSCTHELIPEDDTSIQSLTVMPDGSM-LAAANNKGNCYVWRLLN-HQT--------ASELEPVHKFQAHNGH 217 (311)
T ss_pred cC------CccccccCCCCCcceeeEEEcCCCcE-EEEecCCccEEEEEccC-CCc--------cccceEhhheecccce
Confidence 98 44444432 33568999999999996 56788889999999977 221 1235677789999999
Q ss_pred eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 246 VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 246 v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
+..+.+||++.+|+ +++.|.+++||+++++ .+....+++|+..+++++|+
T Consensus 218 il~C~lSPd~k~la--------t~ssdktv~iwn~~~~-----~kle~~l~gh~rWvWdc~FS 267 (311)
T KOG0315|consen 218 ILRCLLSPDVKYLA--------TCSSDKTVKIWNTDDF-----FKLELVLTGHQRWVWDCAFS 267 (311)
T ss_pred EEEEEECCCCcEEE--------eecCCceEEEEecCCc-----eeeEEEeecCCceEEeeeec
Confidence 99999999887655 5556699999999953 24556789999999999997
No 28
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.8e-36 Score=223.16 Aligned_cols=245 Identities=20% Similarity=0.324 Sum_probs=206.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccc---ccccCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIT---SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.|+||++ .|..++|+..|++|++++.|=.+++||.++... ..............-.....+.....+..++.|+.
T Consensus 144 ~~LrGHt~-sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~ 222 (406)
T KOG0295|consen 144 RSLRGHTD-SVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWEC 222 (406)
T ss_pred hhhhcccc-ceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEec
Confidence 57999999 799999999999999999999999999987411 11111111111111111244555667889999999
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-----------
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL----------- 147 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~----------- 147 (309)
.++.++.++.+|...|..++.+.|| .++++|+.|.+|++|-+.+.+ +...+..|.-+|-|++|.|.
T Consensus 223 ~tg~cv~t~~~h~ewvr~v~v~~DG-ti~As~s~dqtl~vW~~~t~~--~k~~lR~hEh~vEci~wap~~~~~~i~~at~ 299 (406)
T KOG0295|consen 223 DTGYCVKTFPGHSEWVRMVRVNQDG-TIIASCSNDQTLRVWVVATKQ--CKAELREHEHPVECIAWAPESSYPSISEATG 299 (406)
T ss_pred ccceeEEeccCchHhEEEEEecCCe-eEEEecCCCceEEEEEeccch--hhhhhhccccceEEEEecccccCcchhhccC
Confidence 9999999999999999999999999 999999999999999998887 56777889999999999772
Q ss_pred ---CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccC
Q 021657 148 ---DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224 (309)
Q Consensus 148 ---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~ 224 (309)
.++++.+++.|++|++||+.+ +.++.++.+|...|..++|+|.|+|| +++.+|+++++||+++
T Consensus 300 ~~~~~~~l~s~SrDktIk~wdv~t------g~cL~tL~ghdnwVr~~af~p~Gkyi-~ScaDDktlrvwdl~~------- 365 (406)
T KOG0295|consen 300 STNGGQVLGSGSRDKTIKIWDVST------GMCLFTLVGHDNWVRGVAFSPGGKYI-LSCADDKTLRVWDLKN------- 365 (406)
T ss_pred CCCCccEEEeecccceEEEEeccC------CeEEEEEecccceeeeeEEcCCCeEE-EEEecCCcEEEEEecc-------
Confidence 236999999999999999999 99999999999999999999999985 5999999999999998
Q ss_pred CCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 225 GPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
.++...+..|..-++++.|+.+.++++ ||+-|.++++|..
T Consensus 366 --------~~cmk~~~ah~hfvt~lDfh~~~p~Vv--------TGsVdqt~KvwEc 405 (406)
T KOG0295|consen 366 --------LQCMKTLEAHEHFVTSLDFHKTAPYVV--------TGSVDQTVKVWEC 405 (406)
T ss_pred --------ceeeeccCCCcceeEEEecCCCCceEE--------eccccceeeeeec
Confidence 667778889999999999999988766 7778899999974
No 29
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=3.9e-35 Score=241.77 Aligned_cols=225 Identities=25% Similarity=0.461 Sum_probs=189.3
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.+|....|.++.|+++|++|++++.|+.+++|+...... .
T Consensus 153 ~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~--------------------------------------~ 194 (456)
T KOG0266|consen 153 TLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS--------------------------------------N 194 (456)
T ss_pred eecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc--------------------------------------h
Confidence 45566445899999999999999999999999999853210 1
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
....+.+|...|.+++|+|++ .++++++.|++|+|||+.... ..++.+.+|...|++++|+| .++++++|+.|++|+
T Consensus 195 ~~~~l~~h~~~v~~~~fs~d~-~~l~s~s~D~tiriwd~~~~~-~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvr 271 (456)
T KOG0266|consen 195 LLRELSGHTRGVSDVAFSPDG-SYLLSGSDDKTLRIWDLKDDG-RNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVR 271 (456)
T ss_pred hhccccccccceeeeEECCCC-cEEEEecCCceEEEeeccCCC-eEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEE
Confidence 344557899999999999999 799999999999999994432 27888999999999999999 789999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
|||+++ ++++..+.+|...|++++|++++.. +++++.|+.|++||+.+.... +...+.++
T Consensus 272 iWd~~~------~~~~~~l~~hs~~is~~~f~~d~~~-l~s~s~d~~i~vwd~~~~~~~-------------~~~~~~~~ 331 (456)
T KOG0266|consen 272 IWDVRT------GECVRKLKGHSDGISGLAFSPDGNL-LVSASYDGTIRVWDLETGSKL-------------CLKLLSGA 331 (456)
T ss_pred EEeccC------CeEEEeeeccCCceEEEEECCCCCE-EEEcCCCccEEEEECCCCcee-------------eeecccCC
Confidence 999999 8999999999999999999999996 568899999999999982210 23344444
Q ss_pred Cc--ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceE
Q 021657 243 RD--KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHV 302 (309)
Q Consensus 243 ~~--~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v 302 (309)
.. +++.+.|+|++.+++ ++..|+.+++||+. ...++.++.+|...+
T Consensus 332 ~~~~~~~~~~fsp~~~~ll--------~~~~d~~~~~w~l~------~~~~~~~~~~~~~~~ 379 (456)
T KOG0266|consen 332 ENSAPVTSVQFSPNGKYLL--------SASLDRTLKLWDLR------SGKSVGTYTGHSNLV 379 (456)
T ss_pred CCCCceeEEEECCCCcEEE--------EecCCCeEEEEEcc------CCcceeeecccCCcc
Confidence 44 599999999988877 66666999999999 678888888887754
No 30
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=1.3e-34 Score=237.75 Aligned_cols=237 Identities=19% Similarity=0.361 Sum_probs=180.9
Q ss_pred ccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.|.||.+ .|++++|+| ++++|++|+.|++|++||+.+..... ...
T Consensus 70 ~l~GH~~-~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~---------------------------------~~~ 115 (493)
T PTZ00421 70 ILLGQEG-PIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQ---------------------------------NIS 115 (493)
T ss_pred eEeCCCC-CEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcccc---------------------------------ccC
Confidence 4789999 899999999 88999999999999999997431100 012
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.++..+.+|...|.+++|+|++..+|++++.|+.|+|||+++++ ....+..|...|.+++|+| ++.+|++++.|+.|
T Consensus 116 ~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~--~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~I 192 (493)
T PTZ00421 116 DPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK--AVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKL 192 (493)
T ss_pred cceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe--EEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEE
Confidence 34566789999999999999876789999999999999999887 6777888999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCC-eeEEEEecCCCcEEEEe---cCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAA-VLCVQWSPDKSSVFGSS---AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
++||+++ ++.+..+.+|.+. +..+.|.+++..++++| +.|+.|++||+++..... .
T Consensus 193 rIwD~rs------g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~--------------~ 252 (493)
T PTZ00421 193 NIIDPRD------GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPY--------------S 252 (493)
T ss_pred EEEECCC------CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCce--------------e
Confidence 9999998 8888888888764 45678999888666544 358999999998743321 1
Q ss_pred eec-CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc-ccceEEEeeeCC
Q 021657 238 QHA-GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK-FKAHVISCTSKP 309 (309)
Q Consensus 238 ~~~-~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~P 309 (309)
... .+...+....|++++..+++++.. |+.|++||+. +++++...+. +..++..++|.|
T Consensus 253 ~~~~d~~~~~~~~~~d~d~~~L~lggkg-------Dg~Iriwdl~------~~~~~~~~~~~s~~~~~g~~~~p 313 (493)
T PTZ00421 253 TVDLDQSSALFIPFFDEDTNLLYIGSKG-------EGNIRCFELM------NERLTFCSSYSSVEPHKGLCMMP 313 (493)
T ss_pred EeccCCCCceEEEEEcCCCCEEEEEEeC-------CCeEEEEEee------CCceEEEeeccCCCCCcceEecc
Confidence 122 223455667789988877753333 4999999998 3444333322 334555665554
No 31
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.1e-34 Score=227.95 Aligned_cols=266 Identities=22% Similarity=0.417 Sum_probs=212.9
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC--cc--ccccCCCCceeecCCCCCCCCcccC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP--AT--AKSAGSSGSIIKQSPKPGDGNDKAA 76 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (309)
+++|++|.+ +|++++|+|++++|++++.||.|++|++.+......... .. ........ ..+..+..++.+.+|
T Consensus 2 ~~~~~~h~~-~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~~~~i~i~ 78 (289)
T cd00200 2 RRTLKGHTG-GVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADG--TYLASGSSDKTIRLW 78 (289)
T ss_pred chHhcccCC-CEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCC--CEEEEEcCCCeEEEE
Confidence 467899998 899999999999999999999999999986532111111 11 11111111 122333447889999
Q ss_pred CCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 77 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
+....+....+..|...|.++.|++++ .++++++.||.|.+||+++.+ ....+..|...+.+++|+| ++.++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 154 (289)
T cd00200 79 DLETGECVRTLTGHTSYVSSVAFSPDG-RILSSSSRDKTIKVWDVETGK--CLTTLRGHTDWVNSVAFSP-DGTFVASSS 154 (289)
T ss_pred EcCcccceEEEeccCCcEEEEEEcCCC-CEEEEecCCCeEEEEECCCcE--EEEEeccCCCcEEEEEEcC-cCCEEEEEc
Confidence 999888888888999999999999986 788888889999999998766 5666778889999999999 788888888
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
.|+.|++||++. .+.+..+..+...+.+++|+|+++.+ ++++.|+.+++||++. ...+
T Consensus 155 ~~~~i~i~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~i~i~d~~~---------------~~~~ 212 (289)
T cd00200 155 QDGTIKLWDLRT------GKCVATLTGHTGEVNSVAFSPDGEKL-LSSSSDGTIKLWDLST---------------GKCL 212 (289)
T ss_pred CCCcEEEEEccc------cccceeEecCccccceEEECCCcCEE-EEecCCCcEEEEECCC---------------Ccee
Confidence 899999999998 77888888888899999999999865 5777799999999987 2334
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+..|...+.++.|+|++ .++++++. ||.|++|++. ..+++..+..|...|.+++|+|
T Consensus 213 ~~~~~~~~~i~~~~~~~~~-~~~~~~~~-------~~~i~i~~~~------~~~~~~~~~~~~~~i~~~~~~~ 271 (289)
T cd00200 213 GTLRGHENGVNSVAFSPDG-YLLASGSE-------DGTIRVWDLR------TGECVQTLSGHTNSVTSLAWSP 271 (289)
T ss_pred cchhhcCCceEEEEEcCCC-cEEEEEcC-------CCcEEEEEcC------CceeEEEccccCCcEEEEEECC
Confidence 4555788899999999984 45654444 4999999998 5677777888999999999986
No 32
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=6.6e-36 Score=221.22 Aligned_cols=254 Identities=17% Similarity=0.313 Sum_probs=203.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC--ccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP--ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
.|+|+.+ |...+++|..|++|+|||..+..+...... ....+.... ...+..++.+..+++|+..+++++.++.
T Consensus 199 gVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tli 274 (499)
T KOG0281|consen 199 GVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLI 274 (499)
T ss_pred ceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHh
Confidence 4788888 456788899999999999887643332221 111222211 1255667788888899999999999999
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
.|...|..+.|+. .++++++.|.++.+||+..... .....+.+|...|+.+.|+ .+++++++.|.+|++|++.
T Consensus 275 hHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd---~kyIVsASgDRTikvW~~s 348 (499)
T KOG0281|consen 275 HHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSASGDRTIKVWSTS 348 (499)
T ss_pred hhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc---cceEEEecCCceEEEEecc
Confidence 9999999999975 4799999999999999976541 2345678999999999995 5799999999999999999
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
+ ...++++.+|+..|.|+.+. ++ ++++|+.|.+|++||+.. +.++..+.||..-|.
T Consensus 349 t------~efvRtl~gHkRGIAClQYr--~r-lvVSGSSDntIRlwdi~~---------------G~cLRvLeGHEeLvR 404 (499)
T KOG0281|consen 349 T------CEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIEC---------------GACLRVLEGHEELVR 404 (499)
T ss_pred c------eeeehhhhcccccceehhcc--Ce-EEEecCCCceEEEEeccc---------------cHHHHHHhchHHhhh
Confidence 9 99999999999999887764 55 678999999999999998 667788999999999
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC---ChhhHhHhhhcccceEEEeeeC
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR---PQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
++.|.. ..++ +|+.||+|++||+...... ...-|+.++..|.+.|..+.|.
T Consensus 405 ciRFd~--krIV--------SGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD 458 (499)
T KOG0281|consen 405 CIRFDN--KRIV--------SGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD 458 (499)
T ss_pred heeecC--ceee--------eccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec
Confidence 999974 4455 7777799999999854322 2334788899999999999884
No 33
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.8e-35 Score=238.28 Aligned_cols=235 Identities=21% Similarity=0.392 Sum_probs=199.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
..+.+|.+ +|..++|+|++.++++|+.|..|+||+.+ +.
T Consensus 45 ~rFdeHdG-pVRgv~FH~~qplFVSGGDDykIkVWnYk----------------------------------------~r 83 (1202)
T KOG0292|consen 45 DRFDEHDG-PVRGVDFHPTQPLFVSGGDDYKIKVWNYK----------------------------------------TR 83 (1202)
T ss_pred hhhhccCC-ccceeeecCCCCeEEecCCccEEEEEecc----------------------------------------cc
Confidence 46789999 99999999999999999999999999997 45
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+++.++.+|-..|..+.|++.- -.++++|+|.+|+||+..+++ ++..+.+|..-|.|.+|+| ....+++++.|.+|
T Consensus 84 rclftL~GHlDYVRt~~FHhey-PWIlSASDDQTIrIWNwqsr~--~iavltGHnHYVMcAqFhp-tEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 84 RCLFTLLGHLDYVRTVFFHHEY-PWILSASDDQTIRIWNWQSRK--CIAVLTGHNHYVMCAQFHP-TEDLIVSASLDQTV 159 (1202)
T ss_pred eehhhhccccceeEEeeccCCC-ceEEEccCCCeEEEEeccCCc--eEEEEecCceEEEeeccCC-ccceEEEecccceE
Confidence 6677889999999999999987 789999999999999999988 8999999999999999999 99999999999999
Q ss_pred EEEecCCCCCC---CC----------------C--C--ceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 162 RMFDRRNLTSN---GV----------------G--S--PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 162 ~i~d~~~~~~~---~~----------------~--~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
|+||+...... +. + . ..+.+++|...|+-++|+|.-+ ++++|++|..|++|.+...
T Consensus 160 RVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~DDRqVKlWrmnet 238 (1202)
T KOG0292|consen 160 RVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNET 238 (1202)
T ss_pred EEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc-eEEecCCcceeeEEEeccc
Confidence 99998643210 00 0 1 1234578999999999999999 6789999999999999862
Q ss_pred cccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF 298 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h 298 (309)
+- -.+-+..+|...|.++-|+|... +++ |.|.|++|+|||+. ....+++++..
T Consensus 239 Ka-------------WEvDtcrgH~nnVssvlfhp~q~-lIl-------SnsEDksirVwDm~------kRt~v~tfrre 291 (1202)
T KOG0292|consen 239 KA-------------WEVDTCRGHYNNVSSVLFHPHQD-LIL-------SNSEDKSIRVWDMT------KRTSVQTFRRE 291 (1202)
T ss_pred cc-------------eeehhhhcccCCcceEEecCccc-eeE-------ecCCCccEEEEecc------cccceeeeecc
Confidence 21 12446689999999999999665 455 55555999999999 67788888877
Q ss_pred cceEEEeeeCC
Q 021657 299 KAHVISCTSKP 309 (309)
Q Consensus 299 ~~~v~~~~~~P 309 (309)
.+.-|.++-||
T Consensus 292 ndRFW~laahP 302 (1202)
T KOG0292|consen 292 NDRFWILAAHP 302 (1202)
T ss_pred CCeEEEEEecC
Confidence 78889988887
No 34
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=9.2e-34 Score=249.94 Aligned_cols=278 Identities=19% Similarity=0.245 Sum_probs=202.5
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc--CCccccccCC--------CCceeecCCCCCCCCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT--DPATAKSAGS--------SGSIIKQSPKPGDGND 73 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 73 (309)
+.+|.+ .|++++|+|+|++|++|+.|+.|+||++......... .+........ ......+..+..++.+
T Consensus 479 ~~~~~~-~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 479 LLNSSN-LVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVV 557 (793)
T ss_pred ccCCCC-cEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeE
Confidence 455887 8999999999999999999999999998642111000 0000000000 0001123445568999
Q ss_pred ccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 74 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
++|+..+.+.+..+.+|.+.|++++|+|.++.+|++|+.||.|++||++++. ....+.. ...+.++.|++.++.+|+
T Consensus 558 ~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~--~~~~~~~-~~~v~~v~~~~~~g~~la 634 (793)
T PLN00181 558 QVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV--SIGTIKT-KANICCVQFPSESGRSLA 634 (793)
T ss_pred EEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc--EEEEEec-CCCeEEEEEeCCCCCEEE
Confidence 9999999988899999999999999997544889999999999999998876 4555554 467999999654799999
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
+|+.||.|++||+++. ..++..+.+|...|.++.|. ++.+ +++++.|+.|++||++..... ...
T Consensus 635 tgs~dg~I~iwD~~~~-----~~~~~~~~~h~~~V~~v~f~-~~~~-lvs~s~D~~ikiWd~~~~~~~---------~~~ 698 (793)
T PLN00181 635 FGSADHKVYYYDLRNP-----KLPLCTMIGHSKTVSYVRFV-DSST-LVSSSTDNTLKLWDLSMSISG---------INE 698 (793)
T ss_pred EEeCCCeEEEEECCCC-----CccceEecCCCCCEEEEEEe-CCCE-EEEEECCCEEEEEeCCCCccc---------cCC
Confidence 9999999999999872 23567788899999999997 5664 669999999999999752110 012
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC-----ChhhHh--HhhhcccceEEEee
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR-----PQDEVL--AELEKFKAHVISCT 306 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~-----~~~~~~--~~~~~h~~~v~~~~ 306 (309)
.++..+.+|...+..+.|+|++.+ ++ +|+.|+.|++|+....... .....+ .....|...|.+++
T Consensus 699 ~~l~~~~gh~~~i~~v~~s~~~~~-la-------sgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ 770 (793)
T PLN00181 699 TPLHSFMGHTNVKNFVGLSVSDGY-IA-------TGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVC 770 (793)
T ss_pred cceEEEcCCCCCeeEEEEcCCCCE-EE-------EEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEE
Confidence 356678899999999999998875 55 4455599999997632100 000011 12244667899999
Q ss_pred eCC
Q 021657 307 SKP 309 (309)
Q Consensus 307 ~~P 309 (309)
|+|
T Consensus 771 ws~ 773 (793)
T PLN00181 771 WRG 773 (793)
T ss_pred EcC
Confidence 986
No 35
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2e-33 Score=218.16 Aligned_cols=279 Identities=17% Similarity=0.292 Sum_probs=211.4
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC------CccccccCCCCceeecCCCCCCCCccc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD------PATAKSAGSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (309)
..+.+|.- +++-..|+|.|.|+|+|...|+|||||.......+... +......+.....+.......+....+
T Consensus 53 ~iYtEH~~-~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~ 131 (603)
T KOG0318|consen 53 DIYTEHAH-QVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHV 131 (603)
T ss_pred eeeccccc-eeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEE
Confidence 35778977 89999999999999999999999999987643222221 111223333333333333333334444
Q ss_pred CCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 76 ADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
+-..++..+-.+.+|...|+++.|-|..+-.++||++|++|.+|+-.-.+ ....+..|..-|.|+.|+| ++.+|++.
T Consensus 132 F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFK--Fk~s~r~HskFV~~VRysP-DG~~Fat~ 208 (603)
T KOG0318|consen 132 FLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFK--FKSSFREHSKFVNCVRYSP-DGSRFATA 208 (603)
T ss_pred EEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCee--eeecccccccceeeEEECC-CCCeEEEe
Confidence 44456667788899999999999999998999999999999999865545 5667788999999999999 99999999
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeec---cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC--
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFE---GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN-- 230 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-- 230 (309)
+.||+|.+||-.+ ++.+..+. +|++.|.+++|+||+.++ ++++.|.+++|||+... +.....+....
T Consensus 209 gsDgki~iyDGkt------ge~vg~l~~~~aHkGsIfalsWsPDs~~~-~T~SaDkt~KIWdVs~~-slv~t~~~~~~v~ 280 (603)
T KOG0318|consen 209 GSDGKIYIYDGKT------GEKVGELEDSDAHKGSIFALSWSPDSTQF-LTVSADKTIKIWDVSTN-SLVSTWPMGSTVE 280 (603)
T ss_pred cCCccEEEEcCCC------ccEEEEecCCCCccccEEEEEECCCCceE-EEecCCceEEEEEeecc-ceEEEeecCCchh
Confidence 9999999999999 89999887 899999999999999984 69999999999999873 32222221110
Q ss_pred ---------------------------CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 231 ---------------------------YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 231 ---------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
........+.+|...|+++..+|++.+++ ||+.||.|.-|+...
T Consensus 281 dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~--------SgsyDG~I~~W~~~~- 351 (603)
T KOG0318|consen 281 DQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY--------SGSYDGHINSWDSGS- 351 (603)
T ss_pred ceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEE--------eeccCceEEEEecCC-
Confidence 11124566789999999999999998776 777779999999984
Q ss_pred ccCChhhHhHhh-hcccceEEEee
Q 021657 284 IYRPQDEVLAEL-EKFKAHVISCT 306 (309)
Q Consensus 284 ~~~~~~~~~~~~-~~h~~~v~~~~ 306 (309)
+..-+-. ++|...|.+++
T Consensus 352 -----g~~~~~~g~~h~nqI~~~~ 370 (603)
T KOG0318|consen 352 -----GTSDRLAGKGHTNQIKGMA 370 (603)
T ss_pred -----ccccccccccccceEEEEe
Confidence 3222111 45666666554
No 36
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.1e-35 Score=207.03 Aligned_cols=211 Identities=28% Similarity=0.518 Sum_probs=184.3
Q ss_pred CcccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 1 MEILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
|+.++.|+. .|.++.|++ +...++++|.|++|++|+...
T Consensus 97 i~~~kEH~~-EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r--------------------------------------- 136 (311)
T KOG0277|consen 97 IHKFKEHKR-EVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR--------------------------------------- 136 (311)
T ss_pred hhHHHhhhh-heEEeccccccceeEEeeccCCceEeecCCC---------------------------------------
Confidence 467899999 999999998 566788999999999999863
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
.+.++++.+|...|...+|+|..+++|++++.|+++++||++... ....+..|..+|.|+.|+..+.+.+++|+.|+
T Consensus 137 -~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g--k~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~ 213 (311)
T KOG0277|consen 137 -PNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG--KFMSIEAHNSEILCCDWSKYNHNVLATGGVDN 213 (311)
T ss_pred -CcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC--ceeEEEeccceeEeecccccCCcEEEecCCCc
Confidence 344677889999999999999988999999999999999998775 34447899999999999998889999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|+.||+++. ..++..+.+|.-.|+.++|+|....+||+++.|-+++|||...... .+.+.
T Consensus 214 ~vr~wDir~~-----r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds--------------~~e~~ 274 (311)
T KOG0277|consen 214 LVRGWDIRNL-----RTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDS--------------AIETV 274 (311)
T ss_pred eEEEEehhhc-----cccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchh--------------hhhhh
Confidence 9999999996 6789999999999999999999988999999999999999986322 34455
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
..|+.-+..+.|++..+..+| ++|.|..++||+.
T Consensus 275 ~~HtEFv~g~Dws~~~~~~vA-------s~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 275 DHHTEFVCGLDWSLFDPGQVA-------STGWDELLYVWNP 308 (311)
T ss_pred hccceEEeccccccccCceee-------ecccccceeeecc
Confidence 678899999999998888888 5556699999984
No 37
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=100.00 E-value=3.2e-34 Score=222.15 Aligned_cols=278 Identities=21% Similarity=0.280 Sum_probs=196.8
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc---------ccCCccccccCCCCceeecCCCCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS---------ATDPATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
.|++|+. .|.++++.|.|.+|+||+.|.+|++||++...... ..+.............+.+..+... .
T Consensus 162 ~l~hgtk-~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aq--a 238 (641)
T KOG0772|consen 162 QLKHGTK-IVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQ--A 238 (641)
T ss_pred eccCCce-EEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcc--e
Confidence 5788888 99999999999999999999999999998762221 2222222233333333333333222 2
Q ss_pred ccCCCCCc------------CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe-----eccC
Q 021657 74 KAADGPSV------------GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-----KAHD 136 (309)
Q Consensus 74 ~~~~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~ 136 (309)
++++.... .-...-++|...++|.+|+|.....|+|++.||+++|||+...+.. ...+ .+..
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q-~qVik~k~~~g~R 317 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ-LQVIKTKPAGGKR 317 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh-eeEEeeccCCCcc
Confidence 22221111 1123346899999999999999899999999999999999865532 2222 2334
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCC--CeeEEEEecCCCcEEEEecCCCcEEEEe
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA--AVLCVQWSPDKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~dg~i~iwd 214 (309)
-+++.++|+| ++..+|+|..||.|.+||.+.... ......-+.|.. .|++|.|++||++| ++-+.|+++++||
T Consensus 318 v~~tsC~~nr-dg~~iAagc~DGSIQ~W~~~~~~v---~p~~~vk~AH~~g~~Itsi~FS~dg~~L-lSRg~D~tLKvWD 392 (641)
T KOG0772|consen 318 VPVTSCAWNR-DGKLIAAGCLDGSIQIWDKGSRTV---RPVMKVKDAHLPGQDITSISFSYDGNYL-LSRGFDDTLKVWD 392 (641)
T ss_pred cCceeeecCC-CcchhhhcccCCceeeeecCCccc---ccceEeeeccCCCCceeEEEeccccchh-hhccCCCceeeee
Confidence 5789999999 999999999999999999876431 112223345655 89999999999975 5999999999999
Q ss_pred CCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHh
Q 021657 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAE 294 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~ 294 (309)
++.+++++..... .....+-+.++|+|+...++...|.- -+...|.+.+||.. +.+.+++
T Consensus 393 Lrq~kkpL~~~tg------------L~t~~~~tdc~FSPd~kli~TGtS~~--~~~~~g~L~f~d~~------t~d~v~k 452 (641)
T KOG0772|consen 393 LRQFKKPLNVRTG------------LPTPFPGTDCCFSPDDKLILTGTSAP--NGMTAGTLFFFDRM------TLDTVYK 452 (641)
T ss_pred ccccccchhhhcC------------CCccCCCCccccCCCceEEEeccccc--CCCCCceEEEEecc------ceeeEEE
Confidence 9997776442111 11223568899999776544333333 45566899999998 6677777
Q ss_pred hhcccceEEEeeeCC
Q 021657 295 LEKFKAHVISCTSKP 309 (309)
Q Consensus 295 ~~~h~~~v~~~~~~P 309 (309)
+.-....|..+.|||
T Consensus 453 i~i~~aSvv~~~Whp 467 (641)
T KOG0772|consen 453 IDISTASVVRCLWHP 467 (641)
T ss_pred ecCCCceEEEEeecc
Confidence 776788999999998
No 38
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=3.9e-34 Score=213.65 Aligned_cols=264 Identities=19% Similarity=0.340 Sum_probs=205.7
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc---CCcc-ccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT---DPAT-AKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
|.+ -|.++... +++++||++||.+|+||.......... .+.. ......+.....+..+..+..+.+|.....+
T Consensus 104 hdD-WVSsv~~~--~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~ 180 (423)
T KOG0313|consen 104 HDD-WVSSVKGA--SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGE 180 (423)
T ss_pred chh-hhhhhccc--CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCch
Confidence 555 56666665 789999999999999998865322211 1111 1111112222244555667777777665543
Q ss_pred ----cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC-----------------------CcceEEEeecc
Q 021657 83 ----PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-----------------------TSPVIKVEKAH 135 (309)
Q Consensus 83 ----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----------------------~~~~~~~~~~~ 135 (309)
.+....||...|.++...+++ ..+++|+.|.+|.||+.... ...++..+.+|
T Consensus 181 ~~~~~~~~~~GHk~~V~sVsv~~sg-tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GH 259 (423)
T KOG0313|consen 181 NKVKALKVCRGHKRSVDSVSVDSSG-TRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGH 259 (423)
T ss_pred hhhhHHhHhcccccceeEEEecCCC-CeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccc
Confidence 334456999999999999999 88999999999999993211 11355677899
Q ss_pred CCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 136 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
..+|.++.|++ ...+++++.|.+|+.||+.+ +..+.++.+ +..+++++.+|... |+++|+.|..+++||-
T Consensus 260 t~~Vs~V~w~d--~~v~yS~SwDHTIk~WDlet------g~~~~~~~~-~ksl~~i~~~~~~~-Ll~~gssdr~irl~DP 329 (423)
T KOG0313|consen 260 TEPVSSVVWSD--ATVIYSVSWDHTIKVWDLET------GGLKSTLTT-NKSLNCISYSPLSK-LLASGSSDRHIRLWDP 329 (423)
T ss_pred ccceeeEEEcC--CCceEeecccceEEEEEeec------ccceeeeec-CcceeEeecccccc-eeeecCCCCceeecCC
Confidence 99999999997 78899999999999999999 888888874 56789999999877 6889999999999999
Q ss_pred CcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh
Q 021657 216 EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL 295 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 295 (309)
++... ....+.+.+|...|.++.|+|.+.++++++|.| +++++||++. ...++..+
T Consensus 330 R~~~g------------s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D-------~t~klWDvRS-----~k~plydI 385 (423)
T KOG0313|consen 330 RTGDG------------SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD-------NTVKLWDVRS-----TKAPLYDI 385 (423)
T ss_pred CCCCC------------ceeEEeeecchhhhhheecCCCCceEEEEEecC-------CeEEEEEecc-----CCCcceee
Confidence 98433 234578899999999999999999999988877 9999999993 34499999
Q ss_pred hcccceEEEeeeC
Q 021657 296 EKFKAHVISCTSK 308 (309)
Q Consensus 296 ~~h~~~v~~~~~~ 308 (309)
.+|.+.|.++.|.
T Consensus 386 ~~h~DKvl~vdW~ 398 (423)
T KOG0313|consen 386 AGHNDKVLSVDWN 398 (423)
T ss_pred ccCCceEEEEecc
Confidence 9999999999985
No 39
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.4e-33 Score=203.56 Aligned_cols=266 Identities=15% Similarity=0.254 Sum_probs=203.6
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
.++.-.+ .|+++.|+++|.+|++++.|.+++|||..++......... ..............+....+..++..++
T Consensus 9 ~f~~~~~-~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl 87 (311)
T KOG1446|consen 9 VFRETNG-KINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSL 87 (311)
T ss_pred ccccCCC-ceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEe
Confidence 4455444 8999999999999999999999999999988544333221 2222222333333333466788999999
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.+.+.++.+.||...|++++.+|-+ ..|++++.|++|++||++..+ +...+.. ..-...+|+| +|-++|++...
T Consensus 88 ~dNkylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~--cqg~l~~--~~~pi~AfDp-~GLifA~~~~~ 161 (311)
T KOG1446|consen 88 HDNKYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKK--CQGLLNL--SGRPIAAFDP-EGLIFALANGS 161 (311)
T ss_pred ecCceEEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCC--CceEEec--CCCcceeECC-CCcEEEEecCC
Confidence 9999999999999999999999988 789999999999999999777 3333332 2334678999 99999999988
Q ss_pred CcEEEEecCCCCCCCCCCceeeecc---CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEG---HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
..|++||+|... ..+..++.. .....+.|.|+|||+++| .++..+.+++.|.-. +..
T Consensus 162 ~~IkLyD~Rs~d----kgPF~tf~i~~~~~~ew~~l~FS~dGK~iL-lsT~~s~~~~lDAf~---------------G~~ 221 (311)
T KOG1446|consen 162 ELIKLYDLRSFD----KGPFTTFSITDNDEAEWTDLEFSPDGKSIL-LSTNASFIYLLDAFD---------------GTV 221 (311)
T ss_pred CeEEEEEecccC----CCCceeEccCCCCccceeeeEEcCCCCEEE-EEeCCCcEEEEEccC---------------CcE
Confidence 899999999865 345555543 366789999999999876 667788999999766 233
Q ss_pred eeeecCCCcc---eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc-ccceEEEeeeCC
Q 021657 236 FFQHAGHRDK---VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK-FKAHVISCTSKP 309 (309)
Q Consensus 236 ~~~~~~~~~~---v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~P 309 (309)
...+.++... -.+..|+|++.+++ +|+.||+|.+|+++ +++.+..+++ +.+++.++.|.|
T Consensus 222 ~~tfs~~~~~~~~~~~a~ftPds~Fvl--------~gs~dg~i~vw~~~------tg~~v~~~~~~~~~~~~~~~fnP 285 (311)
T KOG1446|consen 222 KSTFSGYPNAGNLPLSATFTPDSKFVL--------SGSDDGTIHVWNLE------TGKKVAVLRGPNGGPVSCVRFNP 285 (311)
T ss_pred eeeEeeccCCCCcceeEEECCCCcEEE--------EecCCCcEEEEEcC------CCcEeeEecCCCCCCccccccCC
Confidence 3444444332 26788999998766 66666999999998 7888888877 688999999987
No 40
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=7.4e-34 Score=231.99 Aligned_cols=264 Identities=18% Similarity=0.318 Sum_probs=183.9
Q ss_pred cccC-CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----c-----------ccccC--CCCceee
Q 021657 2 EILT-GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----T-----------AKSAG--SSGSIIK 63 (309)
Q Consensus 2 ~~l~-~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~-----------~~~~~--~~~~~~~ 63 (309)
|.+. +|.+ +|+++.||+||+|||+||+||.||||.+............ . ..... .......
T Consensus 260 Qe~~~ah~g-aIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 260 QEISNAHKG-AIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eccccccCC-cEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 4456 8999 8999999999999999999999999998763111000000 0 00000 0000001
Q ss_pred cCCCCCCCCcccCC---CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCcee
Q 021657 64 QSPKPGDGNDKAAD---GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 140 (309)
Q Consensus 64 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 140 (309)
.........+.+-. ....+++..+.+|.+.|.++.|+.++ +|++++.|.+|+||++...+ +...+ .|.+-|+
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~--fLLSSSMDKTVRLWh~~~~~--CL~~F-~HndfVT 413 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN--FLLSSSMDKTVRLWHPGRKE--CLKVF-SHNDFVT 413 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccCC--eeEeccccccEEeecCCCcc--eeeEE-ecCCeeE
Confidence 11111111111111 22457888999999999999999875 89999999999999998666 56665 6999999
Q ss_pred EEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccc
Q 021657 141 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 141 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
|++|+|.+.++|++|+.||.||||++.. .+.+. ...-..-|++++|.|||++. +.|+.+|.+++|+......
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d------~~Vv~-W~Dl~~lITAvcy~PdGk~a-vIGt~~G~C~fY~t~~lk~ 485 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISD------KKVVD-WNDLRDLITAVCYSPDGKGA-VIGTFNGYCRFYDTEGLKL 485 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCc------CeeEe-ehhhhhhheeEEeccCCceE-EEEEeccEEEEEEccCCeE
Confidence 9999999999999999999999999986 44444 43345789999999999974 5999999999999987333
Q ss_pred cccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhccc
Q 021657 221 KVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFK 299 (309)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~ 299 (309)
.....-...+.. . ..|. .|+++.|.|...--++..| .|..|+|+|.+ +.+++..++++.
T Consensus 486 ~~~~~I~~~~~K-----k-~~~~-rITG~Q~~p~~~~~vLVTS-------nDSrIRI~d~~------~~~lv~KfKG~~ 544 (712)
T KOG0283|consen 486 VSDFHIRLHNKK-----K-KQGK-RITGLQFFPGDPDEVLVTS-------NDSRIRIYDGR------DKDLVHKFKGFR 544 (712)
T ss_pred EEeeeEeeccCc-----c-ccCc-eeeeeEecCCCCCeEEEec-------CCCceEEEecc------chhhhhhhcccc
Confidence 222111110000 0 1123 8999999986664333333 44899999998 567777777654
No 41
>PTZ00420 coronin; Provisional
Probab=100.00 E-value=4.8e-33 Score=229.71 Aligned_cols=239 Identities=18% Similarity=0.283 Sum_probs=171.9
Q ss_pred cccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
..|.+|.+ +|++++|+|+ +.+|+||+.||+|+|||+.+...... ..
T Consensus 68 ~~L~gH~~-~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~--------------------------------~i 114 (568)
T PTZ00420 68 IKLKGHTS-SILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVK--------------------------------EI 114 (568)
T ss_pred EEEcCCCC-CEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccc--------------------------------cc
Confidence 46889998 8999999996 78999999999999999974311000 00
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
..++..+.+|...|.+++|+|++..+|++++.|++|+|||+++++ ....+. |...|.+++|+| ++.+|++++.|+.
T Consensus 115 ~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--~~~~i~-~~~~V~Slswsp-dG~lLat~s~D~~ 190 (568)
T PTZ00420 115 KDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--RAFQIN-MPKKLSSLKWNI-KGNLLSGTCVGKH 190 (568)
T ss_pred ccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--EEEEEe-cCCcEEEEEECC-CCCEEEEEecCCE
Confidence 123445678999999999999986667899999999999999887 344443 567899999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEE-----EEecCCCcEEEEecCC----CcEEEEeCCcccccccCCCCCcCC
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCV-----QWSPDKSSVFGSSAED----GLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~l~~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
|++||+++ ++.+.++.+|.+.+.+. .|++++.+++ +++.| +.|+|||++....+..
T Consensus 191 IrIwD~Rs------g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~Il-TtG~d~~~~R~VkLWDlr~~~~pl~-------- 255 (568)
T PTZ00420 191 MHIIDPRK------QEIASSFHIHDGGKNTKNIWIDGLGGDDNYIL-STGFSKNNMREMKLWDLKNTTSALV-------- 255 (568)
T ss_pred EEEEECCC------CcEEEEEecccCCceeEEEEeeeEcCCCCEEE-EEEcCCCCccEEEEEECCCCCCceE--------
Confidence 99999999 88888999998765433 3457888765 55544 4799999997333211
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
...+..+...+.. .|.++...++++|+ .|+.|++|++... ....+.++. +..++.+++|.|
T Consensus 256 ----~~~ld~~~~~L~p-~~D~~tg~l~lsGk-------GD~tIr~~e~~~~----~~~~l~~~~-s~~p~~g~~f~P 316 (568)
T PTZ00420 256 ----TMSIDNASAPLIP-HYDESTGLIYLIGK-------GDGNCRYYQHSLG----SIRKVNEYK-SCSPFRSFGFLP 316 (568)
T ss_pred ----EEEecCCccceEE-eeeCCCCCEEEEEE-------CCCeEEEEEccCC----cEEeecccc-cCCCccceEEcc
Confidence 1223333333333 34455555666554 4499999999731 122233333 556777788776
No 42
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=3.8e-33 Score=199.65 Aligned_cols=225 Identities=23% Similarity=0.439 Sum_probs=180.1
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
.+|+. .|++++|+|.|++|++||.|.++.||.-.. ...+.+
T Consensus 58 ~~hkr-sVRsvAwsp~g~~La~aSFD~t~~Iw~k~~--------------------------------------~efecv 98 (312)
T KOG0645|consen 58 DGHKR-SVRSVAWSPHGRYLASASFDATVVIWKKED--------------------------------------GEFECV 98 (312)
T ss_pred ccchh-eeeeeeecCCCcEEEEeeccceEEEeecCC--------------------------------------CceeEE
Confidence 37898 899999999999999999999999998764 255678
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC-CcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
..+++|...|.+++|+++| ++||+|++|..|-||.+..+ +..+...+..|...|..+.|+| ...+|++++.|.+|++
T Consensus 99 ~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP-t~dlL~S~SYDnTIk~ 176 (312)
T KOG0645|consen 99 ATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP-TEDLLFSCSYDNTIKV 176 (312)
T ss_pred eeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC-CcceeEEeccCCeEEE
Confidence 8899999999999999999 99999999999999998743 3456778899999999999999 9999999999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccc-----ccCCCCC----------
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK-----VEQGPRT---------- 228 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~-----~~~~~~~---------- 228 (309)
|+-..... ..+++++.+|...|.+++|++.|.. ++++++|++++||.....-.. ....+..
T Consensus 177 ~~~~~ddd---W~c~~tl~g~~~TVW~~~F~~~G~r-l~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~~~~IaS~ggD 252 (312)
T KOG0645|consen 177 YRDEDDDD---WECVQTLDGHENTVWSLAFDNIGSR-LVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWDNGVIASGGGD 252 (312)
T ss_pred EeecCCCC---eeEEEEecCccceEEEEEecCCCce-EEEecCCcceEeeeeccCcchhcccceEeeeecccceEeccCC
Confidence 98763211 7889999999999999999999987 579999999999994421111 0000000
Q ss_pred --------cCCC----Ccee-eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 229 --------TNYP----AGLF-FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 229 --------~~~~----~~~~-~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...+ ...+ .....|...|+++.|+|....+++++|+| |.|++|.+.
T Consensus 253 ~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DD-------G~v~~W~l~ 311 (312)
T KOG0645|consen 253 DAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDD-------GIVNFWELE 311 (312)
T ss_pred CEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCC-------ceEEEEEec
Confidence 0001 1111 13456888999999999766677755555 999999975
No 43
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=100.00 E-value=7.1e-34 Score=216.81 Aligned_cols=248 Identities=21% Similarity=0.377 Sum_probs=203.0
Q ss_pred CCCCcceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 6 GHQDNAEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
-|.+ .|+.+.+-|.. ..+|+++..+.|.|||..+........ ....+-
T Consensus 122 ~h~g-EVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~------------------------------~~~~Pd 170 (422)
T KOG0264|consen 122 NHDG-EVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKAS------------------------------GECRPD 170 (422)
T ss_pred cCCc-cchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCccccc------------------------------ccCCCc
Confidence 3777 78999999965 567788999999999987542221110 023455
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-----ceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-----PVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
..+.+|.+.-.+++|++.....|++++.|++|++||+..... .....+.+|...|..++|++....+|++++.|+
T Consensus 171 l~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~ 250 (422)
T KOG0264|consen 171 LRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDG 250 (422)
T ss_pred eEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCC
Confidence 678899988889999998878899999999999999975432 356678899999999999998889999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.+.|||+|+.. .++....++|.+.|++++|+|-+.++||+|+.|++|++||+|+..+ ++..+
T Consensus 251 ~L~iwD~R~~~----~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--------------~lh~~ 312 (422)
T KOG0264|consen 251 KLMIWDTRSNT----SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK--------------PLHTF 312 (422)
T ss_pred eEEEEEcCCCC----CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc--------------Cceec
Confidence 99999999521 6777888999999999999999999999999999999999998443 56788
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC--------ChhhHhHhhhcccceEEEeeeCC
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR--------PQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+|...|..|.|+|+...++|+++.| +.+.|||+...... ...+++..-.||...|....|+|
T Consensus 313 e~H~dev~~V~WSPh~etvLASSg~D-------~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp 383 (422)
T KOG0264|consen 313 EGHEDEVFQVEWSPHNETVLASSGTD-------RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNP 383 (422)
T ss_pred cCCCcceEEEEeCCCCCceeEecccC-------CcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCC
Confidence 99999999999999999999965555 99999999854322 12234556678999999999987
No 44
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.2e-34 Score=232.92 Aligned_cols=242 Identities=21% Similarity=0.344 Sum_probs=202.6
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
++.-+. .|.+++|+|...+++++--.|.|++||.+ ....
T Consensus 5 fEskSs-RvKglsFHP~rPwILtslHsG~IQlWDYR----------------------------------------M~tl 43 (1202)
T KOG0292|consen 5 FESKSS-RVKGLSFHPKRPWILTSLHSGVIQLWDYR----------------------------------------MGTL 43 (1202)
T ss_pred hhcccc-cccceecCCCCCEEEEeecCceeeeehhh----------------------------------------hhhH
Confidence 444444 78999999999999999999999999987 3345
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
+..|.+|.++|..+.|+|+. .+|++|++|-.|++|+..+.+ +..++.+|-+-|+.+.|++ .-.++++++.|.+|+|
T Consensus 44 i~rFdeHdGpVRgv~FH~~q-plFVSGGDDykIkVWnYk~rr--clftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrI 119 (1202)
T KOG0292|consen 44 IDRFDEHDGPVRGVDFHPTQ-PLFVSGGDDYKIKVWNYKTRR--CLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRI 119 (1202)
T ss_pred HhhhhccCCccceeeecCCC-CeEEecCCccEEEEEecccce--ehhhhccccceeEEeeccC-CCceEEEccCCCeEEE
Confidence 67788999999999999998 789999999999999998888 8889999999999999999 8999999999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC----CcC--------C
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR----TTN--------Y 231 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~--------~ 231 (309)
|+..+ .+++..+.+|...|.|.+|+|... ++++++-|.+|+|||+....+....... ... .
T Consensus 120 WNwqs------r~~iavltGHnHYVMcAqFhptED-lIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg 192 (1202)
T KOG0292|consen 120 WNWQS------RKCIAVLTGHNHYVMCAQFHPTED-LIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFG 192 (1202)
T ss_pred EeccC------CceEEEEecCceEEEeeccCCccc-eEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcC
Confidence 99999 999999999999999999999877 5789999999999999764333221110 000 0
Q ss_pred --CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 232 --PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 232 --~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
-.-..+.+.||...|+-++|+|.-+.++ ||+.|..|++|.++.. ..-.+-+..+|.+.|.++.|||
T Consensus 193 ~~DaVVK~VLEGHDRGVNwaAfhpTlpliV--------SG~DDRqVKlWrmnet----KaWEvDtcrgH~nnVssvlfhp 260 (1202)
T KOG0292|consen 193 QTDAVVKHVLEGHDRGVNWAAFHPTLPLIV--------SGADDRQVKLWRMNET----KAWEVDTCRGHYNNVSSVLFHP 260 (1202)
T ss_pred CcCeeeeeeecccccccceEEecCCcceEE--------ecCCcceeeEEEeccc----cceeehhhhcccCCcceEEecC
Confidence 1113356789999999999999888555 5666699999999842 2334567889999999999998
No 45
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-33 Score=213.41 Aligned_cols=245 Identities=21% Similarity=0.355 Sum_probs=187.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
++|..|++ .|+-+.||++|++|||++.|.+..+|++... ...
T Consensus 218 qil~~htd-EVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d-------------------------------------~~~ 259 (519)
T KOG0293|consen 218 QILQDHTD-EVWFLQFSHNGKYLASASKDSTAIIWIVVYD-------------------------------------VHF 259 (519)
T ss_pred hhHhhCCC-cEEEEEEcCCCeeEeeccCCceEEEEEEecC-------------------------------------cce
Confidence 57889999 9999999999999999999999999998632 113
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe-eccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
+...++.+|..+|.-+.|+||+ ++|++|+.|..+.+||+.++.. ...+ .++...+.+++|.| ++..+++|+.|+.
T Consensus 260 kl~~tlvgh~~~V~yi~wSPDd-ryLlaCg~~e~~~lwDv~tgd~--~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~ 335 (519)
T KOG0293|consen 260 KLKKTLVGHSQPVSYIMWSPDD-RYLLACGFDEVLSLWDVDTGDL--RHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRT 335 (519)
T ss_pred eeeeeeecccCceEEEEECCCC-CeEEecCchHheeeccCCcchh--hhhcccCcCCCcceeEEcc-CCceeEecCCCCc
Confidence 4567888999999999999998 8899999999999999999983 3332 23567899999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCC-CCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccc---ccCCCCCc-----C-
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHS-AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK---VEQGPRTT-----N- 230 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~---~~~~~~~~-----~- 230 (309)
|..||+. +..+...++.. ..|.+++..+||++++ +.+.|..|++|+....-.. .++.+-.+ .
T Consensus 336 i~~wdlD-------gn~~~~W~gvr~~~v~dlait~Dgk~vl-~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~ 407 (519)
T KOG0293|consen 336 IIMWDLD-------GNILGNWEGVRDPKVHDLAITYDGKYVL-LVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDG 407 (519)
T ss_pred EEEecCC-------cchhhcccccccceeEEEEEcCCCcEEE-EEecccceeeechhhhhhhccccccCceeEEEEcCCC
Confidence 9999998 45566665543 4589999999999977 5557999999998762221 01000000 0
Q ss_pred -----------------CCCceeeeecCCCc--ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhH
Q 021657 231 -----------------YPAGLFFQHAGHRD--KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEV 291 (309)
Q Consensus 231 -----------------~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~ 291 (309)
.....+..+.||.. .+..-+|--.+..++++| +.|+.|+||+.. ++++
T Consensus 408 k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSG-------SED~kvyIWhr~------sgkl 474 (519)
T KOG0293|consen 408 KLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASG-------SEDSKVYIWHRI------SGKL 474 (519)
T ss_pred cEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEec-------CCCceEEEEEcc------CCce
Confidence 01112334445543 344445554444566644 455999999999 8999
Q ss_pred hHhhhcccceEEEeeeCC
Q 021657 292 LAELEKFKAHVISCTSKP 309 (309)
Q Consensus 292 ~~~~~~h~~~v~~~~~~P 309 (309)
+.++.||...|.+|+|+|
T Consensus 475 l~~LsGHs~~vNcVswNP 492 (519)
T KOG0293|consen 475 LAVLSGHSKTVNCVSWNP 492 (519)
T ss_pred eEeecCCcceeeEEecCC
Confidence 999999999999999998
No 46
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=6.1e-33 Score=215.46 Aligned_cols=265 Identities=17% Similarity=0.214 Sum_probs=199.7
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceee------cCCCCCCCCcccCCCC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIK------QSPKPGDGNDKAADGP 79 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 79 (309)
+|++ .|++++|+||++.++|++.|.+++|||+.+............. ....+-. +..-...+.+.+++..
T Consensus 233 aHkG-sIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v---~dqqvG~lWqkd~lItVSl~G~in~ln~~ 308 (603)
T KOG0318|consen 233 AHKG-SIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTV---EDQQVGCLWQKDHLITVSLSGTINYLNPS 308 (603)
T ss_pred Cccc-cEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCch---hceEEEEEEeCCeEEEEEcCcEEEEeccc
Confidence 8999 7999999999999999999999999999987444433322221 1111111 1222346778888888
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--------------------------------
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-------------------------------- 127 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------------------- 127 (309)
...++..+.+|...|+++..+|++ .+|++|+.||.|.-||..++...
T Consensus 309 d~~~~~~i~GHnK~ITaLtv~~d~-~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~ 387 (603)
T KOG0318|consen 309 DPSVLKVISGHNKSITALTVSPDG-KTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLR 387 (603)
T ss_pred CCChhheecccccceeEEEEcCCC-CEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEE
Confidence 888999999999999999999999 89999999999999998654210
Q ss_pred ---------------------------------------eEEEeec--------cCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 128 ---------------------------------------VIKVEKA--------HDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 128 ---------------------------------------~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
-+..+.. -.-...+++++| ++..+++|+.|+.
T Consensus 388 ~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~-~~~~vaVGG~Dgk 466 (603)
T KOG0318|consen 388 VISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSP-DGSEVAVGGQDGK 466 (603)
T ss_pred EEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcC-CCCEEEEecccce
Confidence 0000000 112345888899 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|++|.+.... .........|.++|++++++||+.+ ||+|...+.+.+||+..... ......
T Consensus 467 vhvysl~g~~----l~ee~~~~~h~a~iT~vaySpd~~y-la~~Da~rkvv~yd~~s~~~--------------~~~~w~ 527 (603)
T KOG0318|consen 467 VHVYSLSGDE----LKEEAKLLEHRAAITDVAYSPDGAY-LAAGDASRKVVLYDVASREV--------------KTNRWA 527 (603)
T ss_pred EEEEEecCCc----ccceeeeecccCCceEEEECCCCcE-EEEeccCCcEEEEEcccCce--------------ecceee
Confidence 9999998632 2233345668999999999999997 68999999999999987222 122334
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
-|...|.+++|+|++. ++|++ +.|-.|.||+++. ..+.+....+|...|..+.|-
T Consensus 528 FHtakI~~~aWsP~n~-~vATG-------SlDt~Viiysv~k-----P~~~i~iknAH~~gVn~v~wl 582 (603)
T KOG0318|consen 528 FHTAKINCVAWSPNNK-LVATG-------SLDTNVIIYSVKK-----PAKHIIIKNAHLGGVNSVAWL 582 (603)
T ss_pred eeeeeEEEEEeCCCce-EEEec-------cccceEEEEEccC-----hhhheEeccccccCceeEEEe
Confidence 5999999999999765 56654 4559999999995 334466667899999999884
No 47
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.5e-33 Score=209.51 Aligned_cols=266 Identities=17% Similarity=0.322 Sum_probs=212.9
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccc--cCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA--TDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.+|..|++ .|.+++.+|+.++++||+.|....||++.++..... .+..............+++++.-.+.+.+|..
T Consensus 57 ~~tF~~H~~-svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~ 135 (399)
T KOG0296|consen 57 LVTFDKHTD-SVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV 135 (399)
T ss_pred eeehhhcCC-ceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence 357899999 899999999999999999999999999998853222 22222233344444556777788899999999
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.++.....+..--..|.-+.|+|.+ .+|+.|+.||.+.+|.+.++. ..+.+.+|..++++=.|.| +|+.++++..|
T Consensus 136 stg~~~~~~~~e~~dieWl~WHp~a-~illAG~~DGsvWmw~ip~~~--~~kv~~Gh~~~ct~G~f~p-dGKr~~tgy~d 211 (399)
T KOG0296|consen 136 STGGEQWKLDQEVEDIEWLKWHPRA-HILLAGSTDGSVWMWQIPSQA--LCKVMSGHNSPCTCGEFIP-DGKRILTGYDD 211 (399)
T ss_pred ccCceEEEeecccCceEEEEecccc-cEEEeecCCCcEEEEECCCcc--eeeEecCCCCCcccccccC-CCceEEEEecC
Confidence 9998888887667788999999987 899999999999999998865 6888999999999999999 89999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeecc---------------------------------------------------CCCC
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEG---------------------------------------------------HSAA 187 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~ 187 (309)
|+|++||+.+ +.++..+.. +...
T Consensus 212 gti~~Wn~kt------g~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~ 285 (399)
T KOG0296|consen 212 GTIIVWNPKT------GQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEEL 285 (399)
T ss_pred ceEEEEecCC------CceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhh
Confidence 9999999998 555544430 1111
Q ss_pred eeEE---EEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecC
Q 021657 188 VLCV---QWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 188 v~~~---~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 264 (309)
+.++ .++..-+ |+|+|+.||+|.|||+... .+...-.|..+|+.+.|.+ ..+++
T Consensus 286 ~esve~~~~ss~lp-L~A~G~vdG~i~iyD~a~~----------------~~R~~c~he~~V~~l~w~~-t~~l~----- 342 (399)
T KOG0296|consen 286 DESVESIPSSSKLP-LAACGSVDGTIAIYDLAAS----------------TLRHICEHEDGVTKLKWLN-TDYLL----- 342 (399)
T ss_pred hhhhhhcccccccc-hhhcccccceEEEEecccc----------------hhheeccCCCceEEEEEcC-cchhe-----
Confidence 1222 2222334 6789999999999999872 1223346888999999999 67777
Q ss_pred CCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 265 DCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 265 d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+++.||.|+.||.+ +++++.++.+|..+|.+.+.+|
T Consensus 343 ---t~c~~g~v~~wDaR------tG~l~~~y~GH~~~Il~f~ls~ 378 (399)
T KOG0296|consen 343 ---TACANGKVRQWDAR------TGQLKFTYTGHQMGILDFALSP 378 (399)
T ss_pred ---eeccCceEEeeecc------ccceEEEEecCchheeEEEEcC
Confidence 66777999999999 8999999999999999999876
No 48
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=3.4e-33 Score=198.93 Aligned_cols=234 Identities=19% Similarity=0.390 Sum_probs=195.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+++|.. .|.+++|+.+|..|++|+.|+++++|+++....
T Consensus 14 r~~~~~~~-~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~-------------------------------------- 54 (313)
T KOG1407|consen 14 RELQGHVQ-KVHSVAWNCDGTKLASGSFDKTVSVWNLERDRF-------------------------------------- 54 (313)
T ss_pred HHhhhhhh-cceEEEEcccCceeeecccCCceEEEEecchhh--------------------------------------
Confidence 35788999 899999999999999999999999999985311
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.......+|.+.|..++|+|..+.+|++++.|.+|++||.+.++ +....... ..-.-+.|+| ++.+++++..|..|
T Consensus 55 ~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k--~~~~i~~~-~eni~i~wsp-~g~~~~~~~kdD~i 130 (313)
T KOG1407|consen 55 RKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGK--CTARIETK-GENINITWSP-DGEYIAVGNKDDRI 130 (313)
T ss_pred hhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCc--EEEEeecc-CcceEEEEcC-CCCEEEEecCcccE
Confidence 11234568999999999999988999999999999999999988 44444333 3344678999 99999999999999
Q ss_pred EEEecCCCCC-----------------------------------CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC
Q 021657 162 RMFDRRNLTS-----------------------------------NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206 (309)
Q Consensus 162 ~i~d~~~~~~-----------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 206 (309)
.+.|.++.+. -+..+++..++.|.....||.|+|+|++ ||+|+.
T Consensus 131 t~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~Gry-fA~GsA 209 (313)
T KOG1407|consen 131 TFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRY-FATGSA 209 (313)
T ss_pred EEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCce-Eeeccc
Confidence 9999887421 1226777888899999999999999997 789999
Q ss_pred CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 207 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
|..+.+||+.. ..+...+.-+.-+|..+.|+.++.+ +| +|+.|-.|-|=++.
T Consensus 210 DAlvSLWD~~E---------------LiC~R~isRldwpVRTlSFS~dg~~-lA-------SaSEDh~IDIA~ve----- 261 (313)
T KOG1407|consen 210 DALVSLWDVDE---------------LICERCISRLDWPVRTLSFSHDGRM-LA-------SASEDHFIDIAEVE----- 261 (313)
T ss_pred cceeeccChhH---------------hhhheeeccccCceEEEEeccCcce-ee-------ccCccceEEeEecc-----
Confidence 99999999987 5566777888899999999998875 55 55555899888888
Q ss_pred ChhhHhHhhhcccceEEEeeeCC
Q 021657 287 PQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 287 ~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
++..+.+++ +.++...|+|||
T Consensus 262 -tGd~~~eI~-~~~~t~tVAWHP 282 (313)
T KOG1407|consen 262 -TGDRVWEIP-CEGPTFTVAWHP 282 (313)
T ss_pred -cCCeEEEee-ccCCceeEEecC
Confidence 788888887 889999999998
No 49
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4e-33 Score=214.50 Aligned_cols=225 Identities=20% Similarity=0.354 Sum_probs=191.7
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
...++ .|++++|-.||++||.|...|.|+|+|+.+ ...+
T Consensus 65 srFk~-~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~----------------------------------------r~iL 103 (487)
T KOG0310|consen 65 SRFKD-VVYSVDFRSDGRLLAAGDESGHVKVFDMKS----------------------------------------RVIL 103 (487)
T ss_pred Hhhcc-ceeEEEeecCCeEEEccCCcCcEEEecccc----------------------------------------HHHH
Confidence 33455 789999999999999999999999999652 2346
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
..+.+|+.+|..+.|+|++...|++|++|+.+++||+.+.. ....+.+|.+.|.|.+|+|.++..+++|+.||.|++|
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~--v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~ 181 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY--VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLW 181 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE--EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEE
Confidence 77889999999999999998999999999999999999887 5668899999999999999778899999999999999
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
|.+.. ...+.++. |..+|.++.+-|.|. ++|+++ ...+++||+-..++ .+..+..|..
T Consensus 182 DtR~~-----~~~v~eln-hg~pVe~vl~lpsgs-~iasAg-Gn~vkVWDl~~G~q--------------ll~~~~~H~K 239 (487)
T KOG0310|consen 182 DTRSL-----TSRVVELN-HGCPVESVLALPSGS-LIASAG-GNSVKVWDLTTGGQ--------------LLTSMFNHNK 239 (487)
T ss_pred EeccC-----CceeEEec-CCCceeeEEEcCCCC-EEEEcC-CCeEEEEEecCCce--------------ehhhhhcccc
Confidence 99983 36677776 889999999999988 466776 56899999986333 3344555999
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.|+++.+..++..|+ |||-|+.|++||+. +-+.+..+. ..++|.+++.+|
T Consensus 240 tVTcL~l~s~~~rLl--------S~sLD~~VKVfd~t------~~Kvv~s~~-~~~pvLsiavs~ 289 (487)
T KOG0310|consen 240 TVTCLRLASDSTRLL--------SGSLDRHVKVFDTT------NYKVVHSWK-YPGPVLSIAVSP 289 (487)
T ss_pred eEEEEEeecCCceEe--------ecccccceEEEEcc------ceEEEEeee-cccceeeEEecC
Confidence 999999999888877 88888999999988 566666665 678999998876
No 50
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=9.6e-33 Score=206.25 Aligned_cols=231 Identities=23% Similarity=0.461 Sum_probs=182.2
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.-+||+. +|-+++..++|..+++|+.|..|+||+........ ...... ......-+--...+..
T Consensus 188 ~~~GHk~-~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~-~E~~s~--------------~rrk~~~~~~~~~~r~ 251 (423)
T KOG0313|consen 188 VCRGHKR-SVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDE-LESSSN--------------RRRKKQKREKEGGTRT 251 (423)
T ss_pred Hhccccc-ceeEEEecCCCCeEEeecccceeeecccCCCcccc-ccccch--------------hhhhhhhhhhcccccC
Confidence 3459999 89999999999999999999999999943321100 000000 0000001111223456
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
++..+.+|+++|.++.|++. ..+++++.|.+|+.||+.++. ....+. ....+.++.++| ..++|++|+.|..|+
T Consensus 252 P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDHTIk~WDletg~--~~~~~~-~~ksl~~i~~~~-~~~Ll~~gssdr~ir 325 (423)
T KOG0313|consen 252 PLVTLEGHTEPVSSVVWSDA--TVIYSVSWDHTIKVWDLETGG--LKSTLT-TNKSLNCISYSP-LSKLLASGSSDRHIR 325 (423)
T ss_pred ceEEecccccceeeEEEcCC--CceEeecccceEEEEEeeccc--ceeeee-cCcceeEeeccc-ccceeeecCCCCcee
Confidence 77889999999999999984 579999999999999999988 444443 467899999999 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+||.|+... .-..+++.+|++.|.++.|+|...++|++|+.|+++++||+|.. ..+++.+.+|
T Consensus 326 l~DPR~~~g---s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~--------------k~plydI~~h 388 (423)
T KOG0313|consen 326 LWDPRTGDG---SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST--------------KAPLYDIAGH 388 (423)
T ss_pred ecCCCCCCC---ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccC--------------CCcceeeccC
Confidence 999998642 34567889999999999999999999999999999999999983 2367889999
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...|.++.|+. +..++ |||.|++|+++.-.
T Consensus 389 ~DKvl~vdW~~-~~~Iv--------SGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 389 NDKVLSVDWNE-GGLIV--------SGGADNKLRIFKGS 418 (423)
T ss_pred CceEEEEeccC-CceEE--------eccCcceEEEeccc
Confidence 99999999996 44444 77777999999876
No 51
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=5.6e-34 Score=211.09 Aligned_cols=200 Identities=21% Similarity=0.283 Sum_probs=174.6
Q ss_pred cCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEE
Q 021657 64 QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 143 (309)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 143 (309)
+..+..+..+.+|+..+...+..+.+|++.|.|+.|.. +.+++|+.|.+|++||+++++ ....+..|...|..+.
T Consensus 210 iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~---rviisGSSDsTvrvWDv~tge--~l~tlihHceaVLhlr 284 (499)
T KOG0281|consen 210 IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE---RVIVSGSSDSTVRVWDVNTGE--PLNTLIHHCEAVLHLR 284 (499)
T ss_pred hhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc---eEEEecCCCceEEEEeccCCc--hhhHHhhhcceeEEEE
Confidence 44567788999999999999999999999999999954 689999999999999999999 7888889999999999
Q ss_pred eccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 144 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
|+ ..++++++.|.+|.+||+..+.. -.+.+.+.+|...|+.+.|+.. ++++++.|.+|++|++.+
T Consensus 285 f~---ng~mvtcSkDrsiaVWdm~sps~---it~rrVLvGHrAaVNvVdfd~k---yIVsASgDRTikvW~~st------ 349 (499)
T KOG0281|consen 285 FS---NGYMVTCSKDRSIAVWDMASPTD---ITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTST------ 349 (499)
T ss_pred Ee---CCEEEEecCCceeEEEeccCchH---HHHHHHHhhhhhheeeeccccc---eEEEecCCceEEEEeccc------
Confidence 95 58999999999999999998542 3455677899999999999754 467999999999999998
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEE
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVI 303 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~ 303 (309)
..++..+.+|...|.++.+. ..+++ +|+.|.+|++||+. .+.++..++||++-|.
T Consensus 350 ---------~efvRtl~gHkRGIAClQYr---~rlvV-------SGSSDntIRlwdi~------~G~cLRvLeGHEeLvR 404 (499)
T KOG0281|consen 350 ---------CEFVRTLNGHKRGIACLQYR---DRLVV-------SGSSDNTIRLWDIE------CGACLRVLEGHEELVR 404 (499)
T ss_pred ---------eeeehhhhcccccceehhcc---CeEEE-------ecCCCceEEEEecc------ccHHHHHHhchHHhhh
Confidence 66788899999999888875 45666 55555999999999 8999999999999999
Q ss_pred EeeeC
Q 021657 304 SCTSK 308 (309)
Q Consensus 304 ~~~~~ 308 (309)
++.|.
T Consensus 405 ciRFd 409 (499)
T KOG0281|consen 405 CIRFD 409 (499)
T ss_pred heeec
Confidence 98875
No 52
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=2.2e-32 Score=198.43 Aligned_cols=244 Identities=21% Similarity=0.336 Sum_probs=202.6
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc---ccCCCCceeecCCCCCCCCcccCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK---SAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
+++||++ +|..+.|.+|++.+++++.|++|+.||++++............ ..........+..+..++.+++||.+
T Consensus 85 ~lkgHsg-AVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 85 VLKGHSG-AVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred eeccccc-eeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 6789999 9999999999999999999999999999999666555443322 11233344566677889999999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
+...++.+. .+-+++++.|..++ ..+.+|+-|+.|++||++.+. ....+.+|.++|+.+..+| ++.++.+-+.|.
T Consensus 164 ~k~~~~t~~-~kyqltAv~f~d~s-~qv~sggIdn~ikvWd~r~~d--~~~~lsGh~DtIt~lsls~-~gs~llsnsMd~ 238 (338)
T KOG0265|consen 164 KKEAIKTFE-NKYQLTAVGFKDTS-DQVISGGIDNDIKVWDLRKND--GLYTLSGHADTITGLSLSR-YGSFLLSNSMDN 238 (338)
T ss_pred ccchhhccc-cceeEEEEEecccc-cceeeccccCceeeeccccCc--ceEEeecccCceeeEEecc-CCCccccccccc
Confidence 998888775 35679999999988 679999999999999999888 7899999999999999999 999999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCC----CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSA----AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
++++||++-.... .+++..+.++.. .....+|+|++++ +.+|+.|..+++||... ...
T Consensus 239 tvrvwd~rp~~p~--~R~v~if~g~~hnfeknlL~cswsp~~~~-i~ags~dr~vyvwd~~~---------------r~~ 300 (338)
T KOG0265|consen 239 TVRVWDVRPFAPS--QRCVKIFQGHIHNFEKNLLKCSWSPNGTK-ITAGSADRFVYVWDTTS---------------RRI 300 (338)
T ss_pred eEEEEEecccCCC--CceEEEeecchhhhhhhcceeeccCCCCc-cccccccceEEEeeccc---------------ccE
Confidence 9999999964321 334666665532 3456789999997 57999999999999887 567
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEE
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIW 278 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw 278 (309)
++.+.||...|+.+.|+|..+.++ +++.|.+|++=
T Consensus 301 lyklpGh~gsvn~~~Fhp~e~iil--------s~~sdk~i~lg 335 (338)
T KOG0265|consen 301 LYKLPGHYGSVNEVDFHPTEPIIL--------SCSSDKTIYLG 335 (338)
T ss_pred EEEcCCcceeEEEeeecCCCcEEE--------EeccCceeEee
Confidence 899999999999999999988766 66666898863
No 53
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.6e-32 Score=219.65 Aligned_cols=259 Identities=18% Similarity=0.285 Sum_probs=208.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 10 NAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 10 ~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
..|++.+|++....|++|-..|...+|++........... .........+.-.. ......+.+.+|+......+.
T Consensus 266 ~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA-~g~~klgQLlVweWqsEsYVl 344 (893)
T KOG0291|consen 266 SKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIA-FGCSKLGQLLVWEWQSESYVL 344 (893)
T ss_pred cceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEE-EcCCccceEEEEEeeccceee
Confidence 3699999999999999999999999999987533322221 11112222222221 123346788999999999999
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
..++|...+++++++||| ++++||++||.|+|||...+- +..++..|.+.|+.++|+. .++.+++.+.||+||.||
T Consensus 345 KQQgH~~~i~~l~YSpDg-q~iaTG~eDgKVKvWn~~Sgf--C~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVRAwD 420 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDG-QLIATGAEDGKVKVWNTQSGF--CFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVRAWD 420 (893)
T ss_pred eccccccceeeEEECCCC-cEEEeccCCCcEEEEeccCce--EEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEEeee
Confidence 999999999999999999 899999999999999998888 8899999999999999999 999999999999999999
Q ss_pred cCCCCCCCCCCceeeeccCC-CCeeEEEEecCCCcEEEEecCCC-cEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 166 RRNLTSNGVGSPINKFEGHS-AAVLCVQWSPDKSSVFGSSAEDG-LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
+.. .+..++|.... ....+++..|.|. ++.+|+.|. .|.+|++.+ ++++-.+.||.
T Consensus 421 lkR------YrNfRTft~P~p~QfscvavD~sGe-lV~AG~~d~F~IfvWS~qT---------------GqllDiLsGHE 478 (893)
T KOG0291|consen 421 LKR------YRNFRTFTSPEPIQFSCVAVDPSGE-LVCAGAQDSFEIFVWSVQT---------------GQLLDILSGHE 478 (893)
T ss_pred ecc------cceeeeecCCCceeeeEEEEcCCCC-EEEeeccceEEEEEEEeec---------------CeeeehhcCCC
Confidence 998 88888887543 3467888999999 455777665 499999998 56677889999
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
++|.+++|+|.+..|+ ||++|.+|++||+-. ......+++ +...++.++|+|
T Consensus 479 gPVs~l~f~~~~~~La--------S~SWDkTVRiW~if~-----s~~~vEtl~-i~sdvl~vsfrP 530 (893)
T KOG0291|consen 479 GPVSGLSFSPDGSLLA--------SGSWDKTVRIWDIFS-----SSGTVETLE-IRSDVLAVSFRP 530 (893)
T ss_pred CcceeeEEccccCeEE--------eccccceEEEEEeec-----cCceeeeEe-eccceeEEEEcC
Confidence 9999999999988655 777779999999973 223344444 677889999987
No 54
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.4e-32 Score=221.97 Aligned_cols=207 Identities=20% Similarity=0.370 Sum_probs=174.5
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
..+||.. .+++++++|||+++|||+.||+|+|||..++.
T Consensus 345 KQQgH~~-~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf---------------------------------------- 383 (893)
T KOG0291|consen 345 KQQGHSD-RITSLAYSPDGQLIATGAEDGKVKVWNTQSGF---------------------------------------- 383 (893)
T ss_pred ecccccc-ceeeEEECCCCcEEEeccCCCcEEEEeccCce----------------------------------------
Confidence 4679999 89999999999999999999999999998543
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-cCCceeEEEeccCCCCeEEEEcCCC-c
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTGSADN-S 160 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg-~ 160 (309)
+..++..|+..|+.++|+..+ +.+++.+-||+|+.||+...+ ..+++.. .+-...|++..| .|..+.+|+.|. .
T Consensus 384 C~vTFteHts~Vt~v~f~~~g-~~llssSLDGtVRAwDlkRYr--NfRTft~P~p~QfscvavD~-sGelV~AG~~d~F~ 459 (893)
T KOG0291|consen 384 CFVTFTEHTSGVTAVQFTARG-NVLLSSSLDGTVRAWDLKRYR--NFRTFTSPEPIQFSCVAVDP-SGELVCAGAQDSFE 459 (893)
T ss_pred EEEEeccCCCceEEEEEEecC-CEEEEeecCCeEEeeeecccc--eeeeecCCCceeeeEEEEcC-CCCEEEeeccceEE
Confidence 445677899999999999998 889999999999999998766 3444433 345678999999 999999999886 7
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|.+|++++ ++.+-.+.+|.++|.+++|+|++. +||+++.|.+|++||+-..... .+--
T Consensus 460 IfvWS~qT------GqllDiLsGHEgPVs~l~f~~~~~-~LaS~SWDkTVRiW~if~s~~~---------------vEtl 517 (893)
T KOG0291|consen 460 IFVWSVQT------GQLLDILSGHEGPVSGLSFSPDGS-LLASGSWDKTVRIWDIFSSSGT---------------VETL 517 (893)
T ss_pred EEEEEeec------CeeeehhcCCCCcceeeEEccccC-eEEeccccceEEEEEeeccCce---------------eeeE
Confidence 99999999 999999999999999999999999 5789999999999999762211 1122
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
.+...+.+++|.|+|..+.+ +.-||.|.+||..+..
T Consensus 518 ~i~sdvl~vsfrPdG~elaV--------aTldgqItf~d~~~~~ 553 (893)
T KOG0291|consen 518 EIRSDVLAVSFRPDGKELAV--------ATLDGQITFFDIKEAV 553 (893)
T ss_pred eeccceeEEEEcCCCCeEEE--------EEecceEEEEEhhhce
Confidence 35667999999999998773 3445999999998654
No 55
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=9.5e-33 Score=222.85 Aligned_cols=267 Identities=18% Similarity=0.286 Sum_probs=220.8
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.||.. .|.+++++.+...+++|+ .+.++||+..+..+....................+..+...+.+.+++..+..
T Consensus 368 ~~~GHR~-dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~ 445 (888)
T KOG0306|consen 368 EIGGHRS-DVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASAS 445 (888)
T ss_pred eeccchh-heeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhh
Confidence 4678998 899999999888788776 46999999998877766665544433333333445556778889999999999
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-----CCcceEEE-----eeccCCceeEEEeccCCCCeE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-----GTSPVIKV-----EKAHDADLHCVDWNPLDDNLI 152 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l 152 (309)
.+...+.|.+.|++++..|++ ..+++|+.|.+|++||..- +.+..... ...-...|.|+.++| ++.+|
T Consensus 446 l~Eti~AHdgaIWsi~~~pD~-~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp-dgk~L 523 (888)
T KOG0306|consen 446 LVETIRAHDGAIWSISLSPDN-KGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP-DGKLL 523 (888)
T ss_pred hhhhhhccccceeeeeecCCC-CceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC-CCcEE
Confidence 999999999999999999998 7899999999999999742 11101111 112356899999999 99999
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
+++-.|.++++|-+.+ .+..-++.+|+-||.||.++||+. ++++|+.|..|+||-++-
T Consensus 524 aVsLLdnTVkVyflDt------lKFflsLYGHkLPV~smDIS~DSk-livTgSADKnVKiWGLdF--------------- 581 (888)
T KOG0306|consen 524 AVSLLDNTVKVYFLDT------LKFFLSLYGHKLPVLSMDISPDSK-LIVTGSADKNVKIWGLDF--------------- 581 (888)
T ss_pred EEEeccCeEEEEEecc------eeeeeeecccccceeEEeccCCcC-eEEeccCCCceEEecccc---------------
Confidence 9999999999999999 788889999999999999999999 678999999999999987
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+.+...+.+|.+.|.++.|.|... ++. |+|.|+.|+-||-. ..++++.+.+|...|++++..|
T Consensus 582 GDCHKS~fAHdDSvm~V~F~P~~~-~FF-------t~gKD~kvKqWDg~------kFe~iq~L~~H~~ev~cLav~~ 644 (888)
T KOG0306|consen 582 GDCHKSFFAHDDSVMSVQFLPKTH-LFF-------TCGKDGKVKQWDGE------KFEEIQKLDGHHSEVWCLAVSP 644 (888)
T ss_pred chhhhhhhcccCceeEEEEcccce-eEE-------EecCcceEEeechh------hhhhheeeccchheeeeeEEcC
Confidence 445567889999999999999555 455 55566999999999 7899999999999999999887
No 56
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.1e-32 Score=221.85 Aligned_cols=214 Identities=22% Similarity=0.394 Sum_probs=185.1
Q ss_pred cccCCCCCcceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+...||+. .|.+++++..+ .+|+++|.|+++++|++........ + ..
T Consensus 405 a~~~gH~~-svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~--~-----------------------------~~ 452 (775)
T KOG0319|consen 405 AQANGHTN-SVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF--P-----------------------------IV 452 (775)
T ss_pred hhhccccc-ccceeeecccCccEEEEecCCceEEEecCCCcccccc--c-----------------------------ce
Confidence 45689999 89999997644 6899999999999999985211100 0 01
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
.........|...|++++.+|++ .++||||.|.+.+||+++..+ ....+.+|...|.++.|+| ..+.+++++.|.+
T Consensus 453 ~~~~~t~~aHdKdIN~Vaia~nd-kLiAT~SqDktaKiW~le~~~--l~~vLsGH~RGvw~V~Fs~-~dq~laT~SgD~T 528 (775)
T KOG0319|consen 453 LTCRYTERAHDKDINCVAIAPND-KLIATGSQDKTAKIWDLEQLR--LLGVLSGHTRGVWCVSFSK-NDQLLATCSGDKT 528 (775)
T ss_pred ehhhHHHHhhcccccceEecCCC-ceEEecccccceeeecccCce--EEEEeeCCccceEEEEecc-ccceeEeccCCce
Confidence 12223456799999999999998 899999999999999999666 8899999999999999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|+||.+.+ ..++.+|.+|...|..+.|-.++++| ++++.||.+++|++++ ..+..++.
T Consensus 529 vKIW~is~------fSClkT~eGH~~aVlra~F~~~~~ql-iS~~adGliKlWnikt---------------~eC~~tlD 586 (775)
T KOG0319|consen 529 VKIWSIST------FSCLKTFEGHTSAVLRASFIRNGKQL-ISAGADGLIKLWNIKT---------------NECEMTLD 586 (775)
T ss_pred EEEEEecc------ceeeeeecCccceeEeeeeeeCCcEE-EeccCCCcEEEEeccc---------------hhhhhhhh
Confidence 99999999 99999999999999999999999985 5999999999999998 56788899
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+|++.|++++-+|....++ |||.||.|.+|.=.
T Consensus 587 ~H~DrvWaL~~~~~~~~~~--------tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 587 AHNDRVWALSVSPLLDMFV--------TGGGDGRIIFWKDV 619 (775)
T ss_pred hccceeEEEeecCccceeE--------ecCCCeEEEEeecC
Confidence 9999999999999888555 77788999999854
No 57
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3.9e-33 Score=207.11 Aligned_cols=188 Identities=19% Similarity=0.388 Sum_probs=173.9
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+..+.+.+|.+.|.|+++.|-+ ..|++|+.|++|+|||+.+++ ....+.+|...|..+++++ ...++++++.|+.|
T Consensus 142 Kl~rVi~gHlgWVr~vavdP~n-~wf~tgs~DrtikIwDlatg~--LkltltGhi~~vr~vavS~-rHpYlFs~gedk~V 217 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDPGN-EWFATGSADRTIKIWDLATGQ--LKLTLTGHIETVRGVAVSK-RHPYLFSAGEDKQV 217 (460)
T ss_pred eehhhhhhccceEEEEeeCCCc-eeEEecCCCceeEEEEcccCe--EEEeecchhheeeeeeecc-cCceEEEecCCCee
Confidence 4456778999999999999986 899999999999999999999 7888999999999999999 88999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+-||+.. .+.++.+.+|-..|.+++.+|.-. ++++|+.|..++|||+++ ...+..+.+
T Consensus 218 KCwDLe~------nkvIR~YhGHlS~V~~L~lhPTld-vl~t~grDst~RvWDiRt---------------r~~V~~l~G 275 (460)
T KOG0285|consen 218 KCWDLEY------NKVIRHYHGHLSGVYCLDLHPTLD-VLVTGGRDSTIRVWDIRT---------------RASVHVLSG 275 (460)
T ss_pred EEEechh------hhhHHHhccccceeEEEeccccce-eEEecCCcceEEEeeecc---------------cceEEEecC
Confidence 9999999 899999999999999999999888 467999999999999998 556788999
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|..+|.++.+.|.++.++ ||+.|++|++||+. .++...++..|+..|.+++.||
T Consensus 276 H~~~V~~V~~~~~dpqvi--------t~S~D~tvrlWDl~------agkt~~tlt~hkksvral~lhP 329 (460)
T KOG0285|consen 276 HTNPVASVMCQPTDPQVI--------TGSHDSTVRLWDLR------AGKTMITLTHHKKSVRALCLHP 329 (460)
T ss_pred CCCcceeEEeecCCCceE--------EecCCceEEEeeec------cCceeEeeecccceeeEEecCC
Confidence 999999999999999877 77777999999999 7888899999999999999987
No 58
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.7e-32 Score=203.91 Aligned_cols=244 Identities=19% Similarity=0.280 Sum_probs=192.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc--CCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT--DPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
-.+.||++ .|+++.|+-+|.+||||+.+|.|+||+..++...... .........-......+..+..++.+..|.+.
T Consensus 100 ~eltgHKD-SVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip 178 (399)
T KOG0296|consen 100 GELTGHKD-SVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP 178 (399)
T ss_pred eEecCCCC-ceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECC
Confidence 35789999 8999999999999999999999999999988544443 22223333333456677778899999999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee--------------------------
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-------------------------- 133 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------------- 133 (309)
+....+.+.+|+.++++=.|.|+| +.++++..||+|++||+.++.. .....
T Consensus 179 ~~~~~kv~~Gh~~~ct~G~f~pdG-Kr~~tgy~dgti~~Wn~ktg~p--~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~ 255 (399)
T KOG0296|consen 179 SQALCKVMSGHNSPCTCGEFIPDG-KRILTGYDDGTIIVWNPKTGQP--LHKITQAEGLELPCISLNLAGSTLTKGNSEG 255 (399)
T ss_pred CcceeeEecCCCCCcccccccCCC-ceEEEEecCceEEEEecCCCce--eEEecccccCcCCccccccccceeEeccCCc
Confidence 988999999999999999999998 7899999999999999987642 11111
Q ss_pred -------------------------ccCCceeEEEeccC--CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCC
Q 021657 134 -------------------------AHDADLHCVDWNPL--DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA 186 (309)
Q Consensus 134 -------------------------~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 186 (309)
.+...+.|+.+.|. .-.++|+|+.||+|.|||+.. .++...+. |..
T Consensus 256 ~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~------~~~R~~c~-he~ 328 (399)
T KOG0296|consen 256 VACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAA------STLRHICE-HED 328 (399)
T ss_pred cEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEeccc------chhheecc-CCC
Confidence 12222333443331 335789999999999999997 55555554 888
Q ss_pred CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCC
Q 021657 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDC 266 (309)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~ 266 (309)
+|..+.|-+ ..+| ++++.||.|+.||.|+ .++++.+.+|...|.+++++|+.++ ++++|+
T Consensus 329 ~V~~l~w~~-t~~l-~t~c~~g~v~~wDaRt---------------G~l~~~y~GH~~~Il~f~ls~~~~~-vvT~s~-- 388 (399)
T KOG0296|consen 329 GVTKLKWLN-TDYL-LTACANGKVRQWDART---------------GQLKFTYTGHQMGILDFALSPQKRL-VVTVSD-- 388 (399)
T ss_pred ceEEEEEcC-cchh-eeeccCceEEeeeccc---------------cceEEEEecCchheeEEEEcCCCcE-EEEecC--
Confidence 899999999 5655 4888999999999999 7788999999999999999997775 555554
Q ss_pred CCCCCCCeEEEEEcc
Q 021657 267 DSTGGGGTLQIWRMS 281 (309)
Q Consensus 267 ~s~~~dg~v~vw~~~ 281 (309)
|++.+||++.
T Consensus 389 -----D~~a~VF~v~ 398 (399)
T KOG0296|consen 389 -----DNTALVFEVP 398 (399)
T ss_pred -----CCeEEEEecC
Confidence 4999999875
No 59
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=2.7e-33 Score=215.22 Aligned_cols=248 Identities=21% Similarity=0.356 Sum_probs=203.3
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc---ccCCCCceeecCCCCCCCCcccCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK---SAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
|+++.||.. +|..++|+.+|..++|+|.|+.|++||++++.+...+...... ...... -..+..+..++.+..||
T Consensus 251 lrtf~gH~k-~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~-~n~fl~G~sd~ki~~wD 328 (503)
T KOG0282|consen 251 LRTFKGHRK-PVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDN-QNIFLVGGSDKKIRQWD 328 (503)
T ss_pred ehhhhcchh-hhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCC-CcEEEEecCCCcEEEEe
Confidence 588999999 9999999999999999999999999999999777666543332 111122 34556678899999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
.++.+.++.+..|-+.|..+.|-++| ..|++.++|+.++||+.+..-. .......+.-...++..+| ++.++++-+.
T Consensus 329 iRs~kvvqeYd~hLg~i~~i~F~~~g-~rFissSDdks~riWe~~~~v~-ik~i~~~~~hsmP~~~~~P-~~~~~~aQs~ 405 (503)
T KOG0282|consen 329 IRSGKVVQEYDRHLGAILDITFVDEG-RRFISSSDDKSVRIWENRIPVP-IKNIADPEMHTMPCLTLHP-NGKWFAAQSM 405 (503)
T ss_pred ccchHHHHHHHhhhhheeeeEEccCC-ceEeeeccCccEEEEEcCCCcc-chhhcchhhccCcceecCC-CCCeehhhcc
Confidence 99999999999999999999999998 8899999999999999876651 2223333445677999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCC--CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHS--AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
|+.|.+|.+...-. ......+++|. +.-..+.|||||++ |++|+.||.+.+||.++ ..+
T Consensus 406 dN~i~ifs~~~~~r---~nkkK~feGh~vaGys~~v~fSpDG~~-l~SGdsdG~v~~wdwkt---------------~kl 466 (503)
T KOG0282|consen 406 DNYIAIFSTVPPFR---LNKKKRFEGHSVAGYSCQVDFSPDGRT-LCSGDSDGKVNFWDWKT---------------TKL 466 (503)
T ss_pred CceEEEEecccccc---cCHhhhhcceeccCceeeEEEcCCCCe-EEeecCCccEEEeechh---------------hhh
Confidence 99999998765322 23344566664 45667899999997 56999999999999998 556
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
+..+.+|.+++..+.|+|..+..+| |||.||.|++|+
T Consensus 467 ~~~lkah~~~ci~v~wHP~e~Skva-------t~~w~G~Ikiwd 503 (503)
T KOG0282|consen 467 VSKLKAHDQPCIGVDWHPVEPSKVA-------TCGWDGLIKIWD 503 (503)
T ss_pred hhccccCCcceEEEEecCCCcceeE-------ecccCceeEecC
Confidence 7788999999999999998887787 555669999996
No 60
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.5e-32 Score=213.91 Aligned_cols=241 Identities=18% Similarity=0.369 Sum_probs=199.7
Q ss_pred CCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC-ccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 8 QDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 8 ~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
.. .|+++.|+++|.+|++|..+|.|.|||..+......... .......-......+..+..++.+..++.+..+....
T Consensus 217 ~~-~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~ 295 (484)
T KOG0305|consen 217 EE-LVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVS 295 (484)
T ss_pred CC-ceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhh
Confidence 44 799999999999999999999999999987755554444 2222222333355666778888898898888776655
Q ss_pred -cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc--CCCcEEE
Q 021657 87 -YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS--ADNSVRM 163 (309)
Q Consensus 87 -~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~i 163 (309)
+.+|...|..++|++++ .+||+|+.|+.+.|||..... ....+..|...|.+++|+|-...+||+|+ .|+.|++
T Consensus 296 ~~~~H~qeVCgLkws~d~-~~lASGgnDN~~~Iwd~~~~~--p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~f 372 (484)
T KOG0305|consen 296 TLQGHRQEVCGLKWSPDG-NQLASGGNDNVVFIWDGLSPE--PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKF 372 (484)
T ss_pred hhhcccceeeeeEECCCC-CeeccCCCccceEeccCCCcc--ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEE
Confidence 88999999999999999 899999999999999996655 67788899999999999998888999975 4899999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEE-EecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG-SSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
||..+ +..+..+. ....|.+|.|++..+.++. .|..++.|.||+... ...+..+.+|
T Consensus 373 wn~~~------g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps---------------~~~~~~l~gH 430 (484)
T KOG0305|consen 373 WNTNT------GARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS---------------MKLVAELLGH 430 (484)
T ss_pred EEcCC------CcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc---------------cceeeeecCC
Confidence 99998 88888887 4678999999998865553 345678899999988 4556788999
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...|..++++|++..++ +|+.|.++++|++-+
T Consensus 431 ~~RVl~la~SPdg~~i~--------t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 431 TSRVLYLALSPDGETIV--------TGAADETLRFWNLFD 462 (484)
T ss_pred cceeEEEEECCCCCEEE--------EecccCcEEeccccC
Confidence 99999999999998877 666668999999985
No 61
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=100.00 E-value=1.7e-32 Score=200.34 Aligned_cols=232 Identities=20% Similarity=0.338 Sum_probs=177.7
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc-
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV- 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (309)
.|..|++ ++.+.+|+|||.++|||+.|..|+|.|++.......... .... +....
T Consensus 107 ylt~HK~-~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~e--m~~~---------------------~~qa~h 162 (430)
T KOG0640|consen 107 YLTSHKS-PCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKE--MISG---------------------DTQARH 162 (430)
T ss_pred EEeeccc-ceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhh--hccC---------------------CcccCC
Confidence 4678999 899999999999999999999999999985422211000 0000 00111
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
-.++++..|..+|+++.|+|.. .+|++|+.|++|+++|.................+|.++.|+| .|.++++|...-++
T Consensus 163 PvIRTlYDH~devn~l~FHPre-~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~ 240 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRE-TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTL 240 (430)
T ss_pred ceEeehhhccCcccceeecchh-heEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecC-CCceEEEecCCCce
Confidence 2357788899999999999988 999999999999999997654222222223457899999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceee---eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 162 RMFDRRNLTSNGVGSPINK---FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
++||+.+ .++... -..|.+.|+++.+++.++ ++++++.||.|++||--. ..++.+
T Consensus 241 rlYdv~T------~QcfvsanPd~qht~ai~~V~Ys~t~~-lYvTaSkDG~IklwDGVS---------------~rCv~t 298 (430)
T KOG0640|consen 241 RLYDVNT------YQCFVSANPDDQHTGAITQVRYSSTGS-LYVTASKDGAIKLWDGVS---------------NRCVRT 298 (430)
T ss_pred eEEeccc------eeEeeecCcccccccceeEEEecCCcc-EEEEeccCCcEEeecccc---------------HHHHHH
Confidence 9999998 443322 245788999999999999 688999999999999765 223333
Q ss_pred e-cCCC-cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 239 H-AGHR-DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 239 ~-~~~~-~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
+ ..|. ..|.+..|..++.+++ +.|.|..+++|.+. +++++.++.
T Consensus 299 ~~~AH~gsevcSa~Ftkn~kyiL--------sSG~DS~vkLWEi~------t~R~l~~Yt 344 (430)
T KOG0640|consen 299 IGNAHGGSEVCSAVFTKNGKYIL--------SSGKDSTVKLWEIS------TGRMLKEYT 344 (430)
T ss_pred HHhhcCCceeeeEEEccCCeEEe--------ecCCcceeeeeeec------CCceEEEEe
Confidence 3 2344 5799999999999888 88888999999999 566655544
No 62
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-32 Score=195.01 Aligned_cols=259 Identities=15% Similarity=0.212 Sum_probs=192.5
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc---ccCCCCceeecCCC---CCCCCcc
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK---SAGSSGSIIKQSPK---PGDGNDK 74 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~ 74 (309)
|-+++||++ +|+|++.+.+.++|+||+.|.++++||++++...........+ ..........+... ...+.+.
T Consensus 45 lGty~GHtG-avW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~ 123 (327)
T KOG0643|consen 45 LGTYDGHTG-AVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVS 123 (327)
T ss_pred eeeecCCCc-eEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEE
Confidence 347899999 9999999999999999999999999999999665554433222 22223333332222 2233444
Q ss_pred cCCCC-------CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC
Q 021657 75 AADGP-------SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147 (309)
Q Consensus 75 ~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 147 (309)
+++.+ ..++...+..+...++.+-|.|.+ ..|++|.+||.|.+||+++++. .+.....|...|+.|+++|
T Consensus 124 ~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~-~~ii~Ghe~G~is~~da~~g~~-~v~s~~~h~~~Ind~q~s~- 200 (327)
T KOG0643|consen 124 VFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLG-ETIIAGHEDGSISIYDARTGKE-LVDSDEEHSSKINDLQFSR- 200 (327)
T ss_pred EEEccCChhhhcccCceEEecCCccceeeeeecccC-CEEEEecCCCcEEEEEcccCce-eeechhhhccccccccccC-
Confidence 45444 556677788888999999999998 8899999999999999998863 5666678999999999999
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc-EEEEeCCcccccccCCC
Q 021657 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 148 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~-i~iwd~~~~~~~~~~~~ 226 (309)
+..++++++.|.+-++||.++ .+.+.++. ...+|++.+++|...+++..|+.+-. |.-=+.+. ++-...+.
T Consensus 201 d~T~FiT~s~Dttakl~D~~t------l~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~-GKFEArFy 272 (327)
T KOG0643|consen 201 DRTYFITGSKDTTAKLVDVRT------LEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRA-GKFEARFY 272 (327)
T ss_pred CcceEEecccCccceeeeccc------eeeEEEee-ecccccceecccccceEEecCCceeeeeeeecccc-cchhhhHH
Confidence 999999999999999999999 88888887 57899999999998887655554421 11111111 10000000
Q ss_pred CCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 227 RTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
. ....+.+...++|-++|++++|+|+|..+. |||.||.|++..+.
T Consensus 273 h--~i~eEEigrvkGHFGPINsvAfhPdGksYs--------SGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 273 H--LIFEEEIGRVKGHFGPINSVAFHPDGKSYS--------SGGEDGYVRLHHFD 317 (327)
T ss_pred H--HHHHHHhccccccccCcceeEECCCCcccc--------cCCCCceEEEEEec
Confidence 0 000124567789999999999999988766 88888999999876
No 63
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=5.3e-31 Score=191.48 Aligned_cols=222 Identities=24% Similarity=0.402 Sum_probs=171.5
Q ss_pred cceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 10 NAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 10 ~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
+.|.+|+||| ...+|+.+|.||+||+|+++..- ...+ +...
T Consensus 28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-------------------------------------~~~~-ka~~ 69 (347)
T KOG0647|consen 28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-------------------------------------QLVP-KAQQ 69 (347)
T ss_pred cchheeEeccccCceEEecccCCceEEEEEecCC-------------------------------------cccc-hhhh
Confidence 3799999999 45566799999999999998420 0111 3456
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCC--eEEEEcCCCcEEEEec
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN--LILTGSADNSVRMFDR 166 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~dg~i~i~d~ 166 (309)
.|.++|.+++|+.+| ..+++|+.|+.+++||+.+++ ...+..|..+|.++.|-+ ... .|++|+.|.+|++||.
T Consensus 70 ~~~~PvL~v~Wsddg-skVf~g~~Dk~~k~wDL~S~Q---~~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~ 144 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDG-SKVFSGGCDKQAKLWDLASGQ---VSQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDT 144 (347)
T ss_pred ccCCCeEEEEEccCC-ceEEeeccCCceEEEEccCCC---eeeeeecccceeEEEEec-CCCcceeEecccccceeeccc
Confidence 799999999999999 889999999999999999987 556678999999999987 555 8999999999999999
Q ss_pred CCCCCCCCCCceeeecc-----------------------------------------CCCCeeEEEEecCCCcEEEEec
Q 021657 167 RNLTSNGVGSPINKFEG-----------------------------------------HSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~-----------------------------------------~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
|.. .++.++.- .+-.+++|+..+|... +|.|+
T Consensus 145 R~~------~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~-~alGs 217 (347)
T KOG0647|consen 145 RSS------NPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDG-FALGS 217 (347)
T ss_pred CCC------CeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCc-eEeee
Confidence 983 33333321 1224567777777664 46777
Q ss_pred CCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC---------cceeeEEEccCCCeEEEEecCCCCCCCCCCeEE
Q 021657 206 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR---------DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQ 276 (309)
Q Consensus 206 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~ 276 (309)
-+|.+-|..+....+ ..-+.++.|. ..|++++|+|.-+.++ |.|.||+..
T Consensus 218 iEGrv~iq~id~~~~-------------~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlv--------TaGsDGtf~ 276 (347)
T KOG0647|consen 218 IEGRVAIQYIDDPNP-------------KDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLV--------TAGSDGTFS 276 (347)
T ss_pred ecceEEEEecCCCCc-------------cCceeEEEeccCCCCCCceEEecceEeecccceEE--------EecCCceEE
Confidence 778777777766222 1223444554 2688999999877766 777779999
Q ss_pred EEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 277 IWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 277 vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
+||-. ....+++.+.|..+|.++.|+
T Consensus 277 FWDkd------ar~kLk~s~~~~qpItcc~fn 302 (347)
T KOG0647|consen 277 FWDKD------ARTKLKTSETHPQPITCCSFN 302 (347)
T ss_pred Eecch------hhhhhhccCcCCCccceeEec
Confidence 99998 778889999999999999986
No 64
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=8.6e-31 Score=205.85 Aligned_cols=241 Identities=25% Similarity=0.474 Sum_probs=192.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+.+|.. .+..+.|+|++++|++++.||.|++||+.+.......... ......... ..+..+..++.+.+|+
T Consensus 45 ~~~~~~~~-~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~i~~~~ 121 (289)
T cd00200 45 RTLKGHTG-PVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDG--RILSSSSRDKTIKVWD 121 (289)
T ss_pred EEEecCCc-ceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCC--CEEEEecCCCeEEEEE
Confidence 35678888 7899999999999999999999999999875322222111 111111111 1222233578899999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..+.+....+..|...|.++.|+|++ .++++++.|+.|++||++.++ ....+..|...+.+++|+| +++.+++++.
T Consensus 122 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 197 (289)
T cd00200 122 VETGKCLTTLRGHTDWVNSVAFSPDG-TFVASSSQDGTIKLWDLRTGK--CVATLTGHTGEVNSVAFSP-DGEKLLSSSS 197 (289)
T ss_pred CCCcEEEEEeccCCCcEEEEEEcCcC-CEEEEEcCCCcEEEEEccccc--cceeEecCccccceEEECC-CcCEEEEecC
Confidence 98888888888899999999999986 788888889999999998776 5666778888999999999 8889999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
++.|++||++. ++.+..+..+...+.+++|+|++. ++++++.||.+++||+.. .....
T Consensus 198 ~~~i~i~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~i~~~~~---------------~~~~~ 255 (289)
T cd00200 198 DGTIKLWDLST------GKCLGTLRGHENGVNSVAFSPDGY-LLASGSEDGTIRVWDLRT---------------GECVQ 255 (289)
T ss_pred CCcEEEEECCC------CceecchhhcCCceEEEEEcCCCc-EEEEEcCCCcEEEEEcCC---------------ceeEE
Confidence 99999999998 778888878888999999999966 566777899999999986 23445
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
.+..|...|.+++|+|++..++ +++.||.+++|+
T Consensus 256 ~~~~~~~~i~~~~~~~~~~~l~--------~~~~d~~i~iw~ 289 (289)
T cd00200 256 TLSGHTNSVTSLAWSPDGKRLA--------SGSADGTIRIWD 289 (289)
T ss_pred EccccCCcEEEEEECCCCCEEE--------EecCCCeEEecC
Confidence 5668888999999999877665 555669999996
No 65
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.3e-32 Score=202.26 Aligned_cols=242 Identities=19% Similarity=0.350 Sum_probs=191.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+-|..|+|||++|++|+.||.|.|||..++....... .+....+.-+
T Consensus 215 h~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLk--------------------------------YQAqd~fMMm 262 (508)
T KOG0275|consen 215 HVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLK--------------------------------YQAQDNFMMM 262 (508)
T ss_pred chhheeeCCCCceEeeccccceeeeehhccchhhhhhh--------------------------------hhhhcceeec
Confidence 67799999999999999999999999998663222111 1112234557
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
..+|.|+.|+.|. .++++|+.||.|++|.++++. +...+. +|...|+|+.|+. ++..+++++.|.++|+.-++.
T Consensus 263 d~aVlci~FSRDs-EMlAsGsqDGkIKvWri~tG~--ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKS- 337 (508)
T KOG0275|consen 263 DDAVLCISFSRDS-EMLASGSQDGKIKVWRIETGQ--CLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKS- 337 (508)
T ss_pred ccceEEEeecccH-HHhhccCcCCcEEEEEEecch--HHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEecccc-
Confidence 8899999999998 889999999999999999998 555554 8999999999999 999999999999999999999
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC-------------------
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN------------------- 230 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------------------- 230 (309)
++.+..+.+|.+.|+...|.++|.+++ +++.||+|++|+.++.......-+....
T Consensus 338 -----GK~LKEfrGHsSyvn~a~ft~dG~~ii-saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVC 411 (508)
T KOG0275|consen 338 -----GKCLKEFRGHSSYVNEATFTDDGHHII-SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVC 411 (508)
T ss_pred -----chhHHHhcCccccccceEEcCCCCeEE-EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEE
Confidence 999999999999999999999999865 9999999999999874433222211111
Q ss_pred ----------CCCceeeeecC---CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc
Q 021657 231 ----------YPAGLFFQHAG---HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK 297 (309)
Q Consensus 231 ----------~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~ 297 (309)
.+.+.+..+.. ..+...+...+|.|.++. ..|.|+.++.|.+. +++...++.-
T Consensus 412 Nrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiY--------cigED~vlYCF~~~------sG~LE~tl~V 477 (508)
T KOG0275|consen 412 NRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIY--------CIGEDGVLYCFSVL------SGKLERTLPV 477 (508)
T ss_pred cCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEE--------EEccCcEEEEEEee------cCceeeeeec
Confidence 01112222211 123456677889888877 55666999999999 7888888999
Q ss_pred ccceEEEeeeCC
Q 021657 298 FKAHVISCTSKP 309 (309)
Q Consensus 298 h~~~v~~~~~~P 309 (309)
|...|..++-||
T Consensus 478 hEkdvIGl~HHP 489 (508)
T KOG0275|consen 478 HEKDVIGLTHHP 489 (508)
T ss_pred ccccccccccCc
Confidence 999999988887
No 66
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=198.69 Aligned_cols=221 Identities=29% Similarity=0.576 Sum_probs=179.6
Q ss_pred cccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
-++.+|.+ .=++|+|||- ...|+||..-+.|++|...++.-...
T Consensus 205 ~t~~ghk~-EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd---------------------------------- 249 (440)
T KOG0302|consen 205 FTFNGHKG-EGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVD---------------------------------- 249 (440)
T ss_pred EEecccCc-cceeeecccccccccccCccccceEeeeeccCceeec----------------------------------
Confidence 46788988 6699999993 34589999999999999876422111
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
...+.+|+..|.+++|+|.....|++|+-||+|+|||++.+........++|.+.|+.+.|+. ...+|++|+.||+
T Consensus 250 ---~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr-~~~lLasG~DdGt 325 (440)
T KOG0302|consen 250 ---QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNR-REPLLASGGDDGT 325 (440)
T ss_pred ---CccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccC-CcceeeecCCCce
Confidence 133567999999999999988999999999999999999986555556689999999999998 6669999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccC----CCCCcCCCCcee
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ----GPRTTNYPAGLF 236 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~~ 236 (309)
++|||+|+.+. ++++..|+.|+.+|++|.|+|....+|++++.|.+|.|||+.......+. .+.....|++++
T Consensus 326 ~~iwDLR~~~~---~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLL 402 (440)
T KOG0302|consen 326 LSIWDLRQFKS---GQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLL 402 (440)
T ss_pred EEEEEhhhccC---CCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeE
Confidence 99999998765 68999999999999999999988888999999999999999764432111 112223566777
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCC
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDD 265 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d 265 (309)
+...+. ..+..+.|++.-+-++++.+.|
T Consensus 403 FVHqGQ-ke~KevhWH~QiPG~lvsTa~d 430 (440)
T KOG0302|consen 403 FVHQGQ-KEVKEVHWHRQIPGLLVSTAID 430 (440)
T ss_pred EEecch-hHhhhheeccCCCCeEEEeccc
Confidence 776653 4789999999988888877766
No 67
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.7e-32 Score=189.80 Aligned_cols=243 Identities=23% Similarity=0.306 Sum_probs=189.4
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.-.+|.+ .|..+..+--|++|||++.|++|+|+.+++.. ...
T Consensus 6 idt~H~D-~IHda~lDyygkrlATcsSD~tVkIf~v~~n~-------------------------------------~s~ 47 (299)
T KOG1332|consen 6 IDTQHED-MIHDAQLDYYGKRLATCSSDGTVKIFEVRNNG-------------------------------------QSK 47 (299)
T ss_pred hhhhhhh-hhhHhhhhhhcceeeeecCCccEEEEEEcCCC-------------------------------------Cce
Confidence 3467888 89999998899999999999999999998531 124
Q ss_pred cccccccccCCeEEEEEec-CCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-CCCeEEEEcCCCc
Q 021657 83 PRGIYNGHEDTVEDVTFCP-SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDNLILTGSADNS 160 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~ 160 (309)
.+..+.+|.++|+.++|.. .-+.+||+++.||.|.||.-..++.........|...|++++|.|. -+-.|++++.||.
T Consensus 48 ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~ 127 (299)
T KOG1332|consen 48 LLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGK 127 (299)
T ss_pred eeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCc
Confidence 5678899999999999964 3338999999999999999888877677778899999999999983 2458899999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecC---CC----------cEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD---KS----------SVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~----------~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
|.+.+.+.... ...-.....|.-.|++++|.|. |. +-|++|+.|+.|+||+.....
T Consensus 128 vsvl~~~~~g~---w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~-------- 196 (299)
T KOG1332|consen 128 VSVLTYDSSGG---WTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDS-------- 196 (299)
T ss_pred EEEEEEcCCCC---ccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcc--------
Confidence 99999987421 2333445678999999999986 41 126799999999999998731
Q ss_pred CcCCCCceeeeecCCCcceeeEEEccCC---CeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEE
Q 021657 228 TTNYPAGLFFQHAGHRDKVVDFHWNASD---PWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVIS 304 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~ 304 (309)
..+-..+.+|.+.|.+++|.|.- ...+|++|.| |++.||........-+..+ ++.....++.
T Consensus 197 -----w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqD-------g~viIwt~~~e~e~wk~tl---l~~f~~~~w~ 261 (299)
T KOG1332|consen 197 -----WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQD-------GTVIIWTKDEEYEPWKKTL---LEEFPDVVWR 261 (299)
T ss_pred -----hhhhhhhhhcchhhhhhhhccccCCCceeeEEecCC-------CcEEEEEecCccCcccccc---cccCCcceEE
Confidence 12234578999999999999964 3457766665 9999999984222222333 3445688999
Q ss_pred eeeCC
Q 021657 305 CTSKP 309 (309)
Q Consensus 305 ~~~~P 309 (309)
+.|++
T Consensus 262 vSWS~ 266 (299)
T KOG1332|consen 262 VSWSL 266 (299)
T ss_pred EEEec
Confidence 98875
No 68
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1e-29 Score=178.14 Aligned_cols=245 Identities=21% Similarity=0.350 Sum_probs=194.2
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccc----------c--ccCCCCceeecCCCCCCCC
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATA----------K--SAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~ 72 (309)
+.|++ .|+|.+|+|+|++|+||+.|++|++.-.....+......... . ...........+.+..+..
T Consensus 86 khhkg-siyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~ 164 (350)
T KOG0641|consen 86 KHHKG-SIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCK 164 (350)
T ss_pred cccCc-cEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcce
Confidence 45666 899999999999999999999999987765433222221111 1 1223345667777888999
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee--c-----cCCceeEEEec
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK--A-----HDADLHCVDWN 145 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~-----~~~~v~~~~~~ 145 (309)
+++-+...++..+.+.+|++.|.++- +-++ .+|++|+.|.+|+.||++-.. .+..+. - ..+.|.+++..
T Consensus 165 iy~tdc~~g~~~~a~sghtghilaly-swn~-~m~~sgsqdktirfwdlrv~~--~v~~l~~~~~~~glessavaav~vd 240 (350)
T KOG0641|consen 165 IYITDCGRGQGFHALSGHTGHILALY-SWNG-AMFASGSQDKTIRFWDLRVNS--CVNTLDNDFHDGGLESSAVAAVAVD 240 (350)
T ss_pred EEEeecCCCCcceeecCCcccEEEEE-EecC-cEEEccCCCceEEEEeeeccc--eeeeccCcccCCCcccceeEEEEEC
Confidence 99999999999999999999998874 2334 789999999999999998766 343332 1 22579999999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
| .+++|++|..|....+||++. +++++.+..|...|.++.|+|.-.+++ +++.|..|++-|+...-..
T Consensus 241 p-sgrll~sg~~dssc~lydirg------~r~iq~f~phsadir~vrfsp~a~yll-t~syd~~ikltdlqgdla~---- 308 (350)
T KOG0641|consen 241 P-SGRLLASGHADSSCMLYDIRG------GRMIQRFHPHSADIRCVRFSPGAHYLL-TCSYDMKIKLTDLQGDLAH---- 308 (350)
T ss_pred C-CcceeeeccCCCceEEEEeeC------CceeeeeCCCccceeEEEeCCCceEEE-EecccceEEEeecccchhh----
Confidence 9 999999999999999999999 999999999999999999999888765 9999999999998752111
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..++.....|...+..+.|+|.+-.++ +.+.|.++.+|-++
T Consensus 309 -------el~~~vv~ehkdk~i~~rwh~~d~sfi--------sssadkt~tlwa~~ 349 (350)
T KOG0641|consen 309 -------ELPIMVVAEHKDKAIQCRWHPQDFSFI--------SSSADKTATLWALN 349 (350)
T ss_pred -------cCceEEEEeccCceEEEEecCccceee--------eccCcceEEEeccC
Confidence 224556678999999999999765544 55556999999875
No 69
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-30 Score=185.68 Aligned_cols=231 Identities=21% Similarity=0.310 Sum_probs=192.2
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.|+||+. +++.+.++.+|.+|++++.|.+..||-.. +++
T Consensus 5 ~l~GHER-plTqiKyN~eGDLlFscaKD~~~~vw~s~----------------------------------------nGe 43 (327)
T KOG0643|consen 5 LLQGHER-PLTQIKYNREGDLLFSCAKDSTPTVWYSL----------------------------------------NGE 43 (327)
T ss_pred ccccCcc-ccceEEecCCCcEEEEecCCCCceEEEec----------------------------------------CCc
Confidence 4789999 99999999999999999999999999865 345
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC----
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD---- 158 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---- 158 (309)
.+-.+.+|++.|+++..+.+. ..+++|+.|.++++||+.+++ ....+ ....+|..+.|++ ++++++....+
T Consensus 44 rlGty~GHtGavW~~Did~~s-~~liTGSAD~t~kLWDv~tGk--~la~~-k~~~~Vk~~~F~~-~gn~~l~~tD~~mg~ 118 (327)
T KOG0643|consen 44 RLGTYDGHTGAVWCCDIDWDS-KHLITGSADQTAKLWDVETGK--QLATW-KTNSPVKRVDFSF-GGNLILASTDKQMGY 118 (327)
T ss_pred eeeeecCCCceEEEEEecCCc-ceeeeccccceeEEEEcCCCc--EEEEe-ecCCeeEEEeecc-CCcEEEEEehhhcCc
Confidence 567889999999999998887 789999999999999999999 45554 3567899999999 88887776543
Q ss_pred -CcEEEEecCCCCCCC-CCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 159 -NSVRMFDRRNLTSNG-VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 159 -g~i~i~d~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
+.|.++|++...... ..++...+..+...++.+-|.|-++++ ++|.+||.|.+||+++..+ .+
T Consensus 119 ~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i-i~Ghe~G~is~~da~~g~~--------------~v 183 (327)
T KOG0643|consen 119 TCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI-IAGHEDGSISIYDARTGKE--------------LV 183 (327)
T ss_pred ceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE-EEecCCCcEEEEEcccCce--------------ee
Confidence 679999999543111 155688888888999999999999975 5999999999999998222 33
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.....|...|+++.++|+..+++ |++.|.+-++||+. +.++++++. ...||.+.+++|
T Consensus 184 ~s~~~h~~~Ind~q~s~d~T~Fi--------T~s~Dttakl~D~~------tl~v~Kty~-te~PvN~aaisP 241 (327)
T KOG0643|consen 184 DSDEEHSSKINDLQFSRDRTYFI--------TGSKDTTAKLVDVR------TLEVLKTYT-TERPVNTAAISP 241 (327)
T ss_pred echhhhccccccccccCCcceEE--------ecccCccceeeecc------ceeeEEEee-ecccccceeccc
Confidence 45567889999999999888766 77777999999999 677777776 467888888877
No 70
>PTZ00421 coronin; Provisional
Probab=99.98 E-value=7.9e-30 Score=209.72 Aligned_cols=216 Identities=17% Similarity=0.241 Sum_probs=168.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC---ccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG---PRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 87 (309)
-|.....++++..+++++.+..+..|+...+...... ...++ ....+
T Consensus 22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~------------------------------~~~G~~~~~~~~l 71 (493)
T PTZ00421 22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKH------------------------------TDYGKLASNPPIL 71 (493)
T ss_pred ccccccccCCCCCcEeECCceEEEEEecCCceEEeec------------------------------cccccCCCCCceE
Confidence 3566677788888999999999999987643211100 00111 12346
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-----ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-----PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.+|.+.|++++|+|.++.+|++|+.|++|++||+..+.. .....+.+|...|.+++|+|...++|++++.|+.|+
T Consensus 72 ~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVr 151 (493)
T PTZ00421 72 LGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVN 151 (493)
T ss_pred eCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEE
Confidence 789999999999994337899999999999999976431 245667899999999999993357999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+||+++ ++.+..+..|...|.+++|+|++.. |++++.|+.|++||++. ...+..+.+|
T Consensus 152 IWDl~t------g~~~~~l~~h~~~V~sla~spdG~l-Latgs~Dg~IrIwD~rs---------------g~~v~tl~~H 209 (493)
T PTZ00421 152 VWDVER------GKAVEVIKCHSDQITSLEWNLDGSL-LCTTSKDKKLNIIDPRD---------------GTIVSSVEAH 209 (493)
T ss_pred EEECCC------CeEEEEEcCCCCceEEEEEECCCCE-EEEecCCCEEEEEECCC---------------CcEEEEEecC
Confidence 999998 7888899999999999999999994 67999999999999997 3345566777
Q ss_pred Ccc-eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 243 RDK-VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 243 ~~~-v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
... +..+.|.+++..++.++. +++.|+.|++||++.
T Consensus 210 ~~~~~~~~~w~~~~~~ivt~G~----s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 210 ASAKSQRCLWAKRKDLIITLGC----SKSQQRQIMLWDTRK 246 (493)
T ss_pred CCCcceEEEEcCCCCeEEEEec----CCCCCCeEEEEeCCC
Confidence 754 457789998776664432 345679999999985
No 71
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=8.9e-32 Score=213.96 Aligned_cols=230 Identities=21% Similarity=0.414 Sum_probs=189.3
Q ss_pred EEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 14 ALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 14 ~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
.+..++ .+++|+|||.||.|++|++....... +......++.|..
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~----------------------------------s~~~~asme~HsD 74 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEP----------------------------------STPYIASMEHHSD 74 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCc----------------------------------ccchhhhhhhhHh
Confidence 445554 57789999999999999987431111 1123567888999
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEe-ccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDW-NPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
.|+++....++ +.|++++.|-+|++|+...+..-+...+..|.+.|.|+++ .+ +..++|+|+.|+.|.+||+.+...
T Consensus 75 WVNDiiL~~~~-~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~ 152 (735)
T KOG0308|consen 75 WVNDIILCGNG-KTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTA 152 (735)
T ss_pred HHhhHHhhcCC-CceEEecCCceEEEeecccCcchhHhhhhcccchheeeeeccc-CceeEEecCCCccEEEEEccCcch
Confidence 99999999888 6899999999999999987753467778899999999999 66 889999999999999999997311
Q ss_pred --CCC--CCceeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 172 --NGV--GSPINKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 172 --~~~--~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
... ......+. +++..|++++.++.|. ++++|+.++.+++||.+. ...+..+.||...|
T Consensus 153 ~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t-~ivsGgtek~lr~wDprt---------------~~kimkLrGHTdNV 216 (735)
T KOG0308|consen 153 TLVASFNNVTVNSLGSGPKDSIYSLAMNQTGT-IIVSGGTEKDLRLWDPRT---------------CKKIMKLRGHTDNV 216 (735)
T ss_pred hhhhhccccccccCCCCCccceeeeecCCcce-EEEecCcccceEEecccc---------------ccceeeeeccccce
Confidence 000 11122233 7788999999999996 688999999999999998 44567788999999
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+..+++|..++ |++.||+|++||+. ..+|+.++..|+..|+++..+|
T Consensus 217 r~ll~~dDGt~~l--------s~sSDgtIrlWdLg------qQrCl~T~~vH~e~VWaL~~~~ 265 (735)
T KOG0308|consen 217 RVLLVNDDGTRLL--------SASSDGTIRLWDLG------QQRCLATYIVHKEGVWALQSSP 265 (735)
T ss_pred EEEEEcCCCCeEe--------ecCCCceEEeeecc------ccceeeeEEeccCceEEEeeCC
Confidence 9999999999988 88888999999999 8999999999999999998765
No 72
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=1.5e-31 Score=216.52 Aligned_cols=227 Identities=15% Similarity=0.287 Sum_probs=189.2
Q ss_pred EEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 13 FALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 13 ~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
..+.|+. +.++|||++..|.|.+||+... ...+.+..+..|.
T Consensus 91 ~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~-------------------------------------~rnk~l~~f~EH~ 133 (839)
T KOG0269|consen 91 ADVKWGQLYSNLIATCSTNGVISVWDLNKS-------------------------------------IRNKLLTVFNEHE 133 (839)
T ss_pred hhcccccchhhhheeecCCCcEEEEecCcc-------------------------------------ccchhhhHhhhhc
Confidence 3456664 4678999999999999999742 1233456788999
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..++++.|++..+++|++|+.||+|++||++..+ ....+.+....|+.+.|+|..++.|+++...|.+++||+|.+
T Consensus 134 Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~--S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp-- 209 (839)
T KOG0269|consen 134 RSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK--SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQP-- 209 (839)
T ss_pred cceeeeeeccCCccEEEecCCCceEEEEeeeccc--ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCc--
Confidence 9999999999999999999999999999999877 456666788899999999988899999999999999999986
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 251 (309)
.++...+.+|.++|.++.|+|++.+ ||+|+.|+.|+|||+...... ..... ....+|..++|
T Consensus 210 ---~r~~~k~~AH~GpV~c~nwhPnr~~-lATGGRDK~vkiWd~t~~~~~-------------~~~tI-nTiapv~rVkW 271 (839)
T KOG0269|consen 210 ---DRCEKKLTAHNGPVLCLNWHPNREW-LATGGRDKMVKIWDMTDSRAK-------------PKHTI-NTIAPVGRVKW 271 (839)
T ss_pred ---hhHHHHhhcccCceEEEeecCCCce-eeecCCCccEEEEeccCCCcc-------------ceeEE-eecceeeeeee
Confidence 6778889999999999999998885 789999999999999862211 11111 23468999999
Q ss_pred ccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 252 NASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 252 ~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
-|..++.+++++. ..|-.|+|||++. .--+..++..|...++.++|.
T Consensus 272 RP~~~~hLAtcsm-----v~dtsV~VWDvrR-----PYIP~~t~~eH~~~vt~i~W~ 318 (839)
T KOG0269|consen 272 RPARSYHLATCSM-----VVDTSVHVWDVRR-----PYIPYATFLEHTDSVTGIAWD 318 (839)
T ss_pred ccCccchhhhhhc-----cccceEEEEeecc-----ccccceeeeccCccccceecc
Confidence 9999999998854 4678999999984 456778889999999999884
No 73
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=6.7e-31 Score=198.65 Aligned_cols=246 Identities=21% Similarity=0.303 Sum_probs=191.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccC---CCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAG---SSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
++|.||.. +|.-+.||||.++|++|+.|..+++||+.++.....+......+.. -......+..+..+..+..|+.
T Consensus 263 ~tlvgh~~-~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdl 341 (519)
T KOG0293|consen 263 KTLVGHSQ-PVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDL 341 (519)
T ss_pred eeeecccC-ceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecC
Confidence 57899999 8999999999999999999999999999998655544433111000 0111122455666677777776
Q ss_pred CCcCcccccccc-cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 79 PSVGPRGIYNGH-EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 79 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
.... ....++- ...|.+++..+|| ..+++.+.|..|++++.++.. ... +.....+|++++.+. +++++++.-.
T Consensus 342 Dgn~-~~~W~gvr~~~v~dlait~Dg-k~vl~v~~d~~i~l~~~e~~~--dr~-lise~~~its~~iS~-d~k~~LvnL~ 415 (519)
T KOG0293|consen 342 DGNI-LGNWEGVRDPKVHDLAITYDG-KYVLLVTVDKKIRLYNREARV--DRG-LISEEQPITSFSISK-DGKLALVNLQ 415 (519)
T ss_pred Ccch-hhcccccccceeEEEEEcCCC-cEEEEEecccceeeechhhhh--hhc-cccccCceeEEEEcC-CCcEEEEEcc
Confidence 5432 2233332 2569999999999 667777799999999987665 222 233457899999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCC--eeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAA--VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+..|++||+.. .+.++.+.+|+.. +-.-+|..-...++|+|++|+.|+||+... ..+
T Consensus 416 ~qei~LWDl~e------~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s---------------gkl 474 (519)
T KOG0293|consen 416 DQEIHLWDLEE------NKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS---------------GKL 474 (519)
T ss_pred cCeeEEeecch------hhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccC---------------Cce
Confidence 99999999997 8889999998765 334456655544789999999999999988 667
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+..+.||...|++++|+|.++.++|++|+| |+|+||....
T Consensus 475 l~~LsGHs~~vNcVswNP~~p~m~ASasDD-------gtIRIWg~~~ 514 (519)
T KOG0293|consen 475 LAVLSGHSKTVNCVSWNPADPEMFASASDD-------GTIRIWGPSD 514 (519)
T ss_pred eEeecCCcceeeEEecCCCCHHHhhccCCC-------CeEEEecCCc
Confidence 889999999999999999999999977777 9999999874
No 74
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.98 E-value=6.5e-31 Score=186.40 Aligned_cols=243 Identities=17% Similarity=0.262 Sum_probs=193.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc-ccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK-SAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
-++.||++ +|++..++.+..+-|+++.|=+.+|||.-++.....+.....+ ..........+..+.....+++++...
T Consensus 53 gtfeghkg-avw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~ 131 (334)
T KOG0278|consen 53 GTFEGHKG-AVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNR 131 (334)
T ss_pred EeeeccCc-ceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccC
Confidence 47899999 9999999999999999999999999999888655555443333 112222233444555666777777765
Q ss_pred c-CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 81 V-GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 81 ~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
. .+...+.+|.+.|..+.|+..+ +.+++...|++|++||.+++. .++.+. .+.+|+++.+++ +++++.++ ..+
T Consensus 132 p~App~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRLWD~rTgt--~v~sL~-~~s~VtSlEvs~-dG~ilTia-~gs 205 (334)
T KOG0278|consen 132 PKAPPKEISGHTGGIRTVLWCHED-KCILSSADDKTVRLWDHRTGT--EVQSLE-FNSPVTSLEVSQ-DGRILTIA-YGS 205 (334)
T ss_pred CCCCchhhcCCCCcceeEEEeccC-ceEEeeccCCceEEEEeccCc--EEEEEe-cCCCCcceeecc-CCCEEEEe-cCc
Confidence 4 4678889999999999999887 778888999999999999998 555553 467899999999 88877776 467
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee-
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ- 238 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~- 238 (309)
.|.+||..+ ..++..++ ....|.+.+++|+.. ++++|++|..++.||..+. ..+..
T Consensus 206 sV~Fwdaks------f~~lKs~k-~P~nV~SASL~P~k~-~fVaGged~~~~kfDy~Tg---------------eEi~~~ 262 (334)
T KOG0278|consen 206 SVKFWDAKS------FGLLKSYK-MPCNVESASLHPKKE-FFVAGGEDFKVYKFDYNTG---------------EEIGSY 262 (334)
T ss_pred eeEEecccc------ccceeecc-CccccccccccCCCc-eEEecCcceEEEEEeccCC---------------ceeeec
Confidence 899999999 77888877 456799999999997 5789999999999999982 22333
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+|.++|.++.|+|+|.. .+ +|+.||+|++|.+..
T Consensus 263 nkgh~gpVhcVrFSPdGE~-yA-------sGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 263 NKGHFGPVHCVRFSPDGEL-YA-------SGSEDGTIRLWQTTP 298 (334)
T ss_pred ccCCCCceEEEEECCCCce-ee-------ccCCCceEEEEEecC
Confidence 3789999999999998875 44 566669999999984
No 75
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.3e-30 Score=191.20 Aligned_cols=264 Identities=18% Similarity=0.337 Sum_probs=194.3
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecC--CCCCCCCcccCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQS--PKPGDGNDKAADG 78 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (309)
|.++.||.+ .|+++.|++.+.+++|++.|++..||...-.-........... .......... ....++....-..
T Consensus 183 L~~Y~GH~G-SVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~h--SsEeE~e~sDe~~~d~d~~~~sD~~ 259 (481)
T KOG0300|consen 183 LATYTGHTG-SVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDH--SSEEEEEHSDEHNRDTDSSEKSDGH 259 (481)
T ss_pred eeeeccccc-ceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCC--CchhhhhcccccccccccccccCCc
Confidence 357899999 8999999999999999999999999984422111110000000 0000000000 0000111111111
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.-.-++..+.+|.+.|.+..|...| ..+++++.|.+..+||+++++ .+..+.+|....+-++-+| ..+++++.+.|
T Consensus 260 tiRvPl~~ltgH~~vV~a~dWL~gg-~Q~vTaSWDRTAnlwDVEtge--~v~~LtGHd~ELtHcstHp-tQrLVvTsSrD 335 (481)
T KOG0300|consen 260 TIRVPLMRLTGHRAVVSACDWLAGG-QQMVTASWDRTANLWDVETGE--VVNILTGHDSELTHCSTHP-TQRLVVTSSRD 335 (481)
T ss_pred eeeeeeeeeeccccceEehhhhcCc-ceeeeeeccccceeeeeccCc--eeccccCcchhccccccCC-cceEEEEeccC
Confidence 2234677889999999999999877 789999999999999999999 8999999999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.+.++||++.. -..+..|++|...|+++.|..+.+ +++|++|.+|++||++++..++ .+
T Consensus 336 tTFRLWDFRea-----I~sV~VFQGHtdtVTS~vF~~dd~--vVSgSDDrTvKvWdLrNMRspl--------------AT 394 (481)
T KOG0300|consen 336 TTFRLWDFREA-----IQSVAVFQGHTDTVTSVVFNTDDR--VVSGSDDRTVKVWDLRNMRSPL--------------AT 394 (481)
T ss_pred ceeEeccchhh-----cceeeeecccccceeEEEEecCCc--eeecCCCceEEEeeeccccCcc--------------ee
Confidence 99999999963 567888999999999999999887 4699999999999999855432 22
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhH-----hhhcccceEEEeeeC
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLA-----ELEKFKAHVISCTSK 308 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~ 308 (309)
.. ...+++.++.+..++ +++.--++ ..|++||++ +..+. .-.+|..-|.|++|.
T Consensus 395 IR-tdS~~NRvavs~g~~-iIAiPhDN-------RqvRlfDln-------G~RlaRlPrtsRqgHrRMV~c~AW~ 453 (481)
T KOG0300|consen 395 IR-TDSPANRVAVSKGHP-IIAIPHDN-------RQVRLFDLN-------GNRLARLPRTSRQGHRRMVTCCAWL 453 (481)
T ss_pred ee-cCCccceeEeecCCc-eEEeccCC-------ceEEEEecC-------CCccccCCcccccccceeeeeeecc
Confidence 22 356788888887444 55544444 899999998 33333 335899999999995
No 76
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=1.3e-30 Score=214.64 Aligned_cols=244 Identities=21% Similarity=0.351 Sum_probs=198.6
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
|.||.+ .|++++|..-+.+|++|+.|.+++|||..++.+.......................+..+..+++|+..+...
T Consensus 245 l~GH~g-~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~ 323 (537)
T KOG0274|consen 245 LVGHFG-GVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGAC 323 (537)
T ss_pred ccCCCC-CceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcce
Confidence 899999 8999999887889999999999999999998766655533222221222222333377899999999999999
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
+..+.+|..+|.++..+ + .++++|+.|++|++||+.+++ +...+.+|...|+++.+.+ . ..+++|+.|+.|++
T Consensus 324 l~l~~~h~~~V~~v~~~--~-~~lvsgs~d~~v~VW~~~~~~--cl~sl~gH~~~V~sl~~~~-~-~~~~Sgs~D~~Ikv 396 (537)
T KOG0274|consen 324 LNLLRGHTGPVNCVQLD--E-PLLVSGSYDGTVKVWDPRTGK--CLKSLSGHTGRVYSLIVDS-E-NRLLSGSLDTTIKV 396 (537)
T ss_pred EEEeccccccEEEEEec--C-CEEEEEecCceEEEEEhhhce--eeeeecCCcceEEEEEecC-c-ceEEeeeeccceEe
Confidence 99999999999999997 3 689999999999999999888 8999999999999998866 4 99999999999999
Q ss_pred EecCCCCCCCCC-CceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC-
Q 021657 164 FDRRNLTSNGVG-SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG- 241 (309)
Q Consensus 164 ~d~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (309)
||+++ . +++..+.+|..-+..+.+. +. ++++++.|+.|++||... .+++..+.+
T Consensus 397 Wdl~~------~~~c~~tl~~h~~~v~~l~~~--~~-~Lvs~~aD~~Ik~WD~~~---------------~~~~~~~~~~ 452 (537)
T KOG0274|consen 397 WDLRT------KRKCIHTLQGHTSLVSSLLLR--DN-FLVSSSADGTIKLWDAEE---------------GECLRTLEGR 452 (537)
T ss_pred ecCCc------hhhhhhhhcCCcccccccccc--cc-eeEeccccccEEEeeccc---------------CceeeeeccC
Confidence 99999 7 8999999999888766654 44 456999999999999988 455666677
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL 295 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 295 (309)
|...|..+++. .+ .+++++. ||.+++||++ ++.+...+
T Consensus 453 ~~~~v~~l~~~--~~-~il~s~~-------~~~~~l~dl~------~~~~~~~l 490 (537)
T KOG0274|consen 453 HVGGVSALALG--KE-EILCSSD-------DGSVKLWDLR------SGTLIRTL 490 (537)
T ss_pred CcccEEEeecC--cc-eEEEEec-------CCeeEEEecc------cCchhhhh
Confidence 67888888886 23 3554444 4999999999 56555554
No 77
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.1e-30 Score=205.50 Aligned_cols=205 Identities=20% Similarity=0.307 Sum_probs=188.4
Q ss_pred CCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEecc
Q 021657 67 KPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146 (309)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 146 (309)
+...+.+.+|+..+...++.+.-..-+|.+..|-+.. +.+++|++|..|++|+.++.+ .++.+.+|.+-|++++.+|
T Consensus 31 ~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRk-nWiv~GsDD~~IrVfnynt~e--kV~~FeAH~DyIR~iavHP 107 (794)
T KOG0276|consen 31 ALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARK-NWIVTGSDDMQIRVFNYNTGE--KVKTFEAHSDYIRSIAVHP 107 (794)
T ss_pred eeecCeeEEEecccceeeeeeeecccchhhheeeecc-ceEEEecCCceEEEEecccce--eeEEeeccccceeeeeecC
Confidence 4457889999999999999999899999999999876 899999999999999999998 7899999999999999999
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCC
Q 021657 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 147 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~ 226 (309)
...++++++.|-.|++||.+.. ..+.++|++|...|.+++|+|....-||+++-|++|++|.+..
T Consensus 108 -t~P~vLtsSDDm~iKlW~we~~-----wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs--------- 172 (794)
T KOG0276|consen 108 -TLPYVLTSSDDMTIKLWDWENE-----WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGS--------- 172 (794)
T ss_pred -CCCeEEecCCccEEEEeeccCc-----eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCC---------
Confidence 8999999999999999999875 7888999999999999999998888899999999999999987
Q ss_pred CCcCCCCceeeeecCCCcceeeEEEccC--CCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEE
Q 021657 227 RTTNYPAGLFFQHAGHRDKVVDFHWNAS--DPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVIS 304 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~ 304 (309)
..+.+++.+|...|+++.+-+- .++++ ||+.|.+++|||.+ +..|+++++||...|..
T Consensus 173 ------~~~nfTl~gHekGVN~Vdyy~~gdkpylI--------sgaDD~tiKvWDyQ------tk~CV~TLeGHt~Nvs~ 232 (794)
T KOG0276|consen 173 ------PHPNFTLEGHEKGVNCVDYYTGGDKPYLI--------SGADDLTIKVWDYQ------TKSCVQTLEGHTNNVSF 232 (794)
T ss_pred ------CCCceeeeccccCcceEEeccCCCcceEE--------ecCCCceEEEeecc------hHHHHHHhhcccccceE
Confidence 5567889999999999999764 35666 66666999999999 89999999999999999
Q ss_pred eeeCC
Q 021657 305 CTSKP 309 (309)
Q Consensus 305 ~~~~P 309 (309)
+.|||
T Consensus 233 v~fhp 237 (794)
T KOG0276|consen 233 VFFHP 237 (794)
T ss_pred EEecC
Confidence 99998
No 78
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.97 E-value=3.6e-30 Score=192.53 Aligned_cols=229 Identities=18% Similarity=0.370 Sum_probs=181.5
Q ss_pred CCCCCcceEEEEECCCC--CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 5 TGHQDNAEFALAMCPTE--PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~--~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
-+|.+ .|+.+..++-+ .+.++-+..|.|+||++............. ......+
T Consensus 148 i~h~g-~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~------------------------~~~s~~~ 202 (440)
T KOG0302|consen 148 IPHYG-GINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLE------------------------VKDSEFR 202 (440)
T ss_pred ccccc-ccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCcccc------------------------ccccccC
Confidence 35777 78888887754 567788899999999997643322211100 0114567
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce-EEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
++..+.+|...=..++|+|.....|++|.--+.|++|...++.... ...+.+|...|-.++|+|.....|++|+.||+|
T Consensus 203 Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsI 282 (440)
T KOG0302|consen 203 PLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSI 282 (440)
T ss_pred ceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceE
Confidence 8889999999999999999654468898888999999998876432 234567999999999999888899999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+|||+|... .+.....+.|.+.|+.|.|+..-. +||+|+.||+++|||+|.... .+++..+.-
T Consensus 283 rIWDiRs~~----~~~~~~~kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~~~~------------~~pVA~fk~ 345 (440)
T KOG0302|consen 283 RIWDIRSGP----KKAAVSTKAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQFKS------------GQPVATFKY 345 (440)
T ss_pred EEEEecCCC----ccceeEeeccCCceeeEEccCCcc-eeeecCCCceEEEEEhhhccC------------CCcceeEEe
Confidence 999999843 233334488999999999999888 789999999999999998432 357788899
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|..+|+++.|+|.....++++|.| ..|.+||+.-
T Consensus 346 Hk~pItsieW~p~e~s~iaasg~D-------~QitiWDlsv 379 (440)
T KOG0302|consen 346 HKAPITSIEWHPHEDSVIAASGED-------NQITIWDLSV 379 (440)
T ss_pred ccCCeeEEEeccccCceEEeccCC-------CcEEEEEeec
Confidence 999999999999988888755544 9999999973
No 79
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=3.7e-29 Score=183.49 Aligned_cols=280 Identities=16% Similarity=0.214 Sum_probs=188.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC---------ccccccCCCCceeecCCCCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP---------ATAKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.+|+||.+ .|++++|+.||++|+|++.|++||||++++-....+... ...........+..... .+..
T Consensus 80 ~~LKgH~~-~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~--~g~~ 156 (420)
T KOG2096|consen 80 SVLKGHKK-EVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVK--RGNK 156 (420)
T ss_pred hhhhccCC-ceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEc--cCCE
Confidence 57999999 899999999999999999999999999987532222111 11111111111111111 2222
Q ss_pred cccCCCCCc------------CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCcee
Q 021657 73 DKAADGPSV------------GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 140 (309)
Q Consensus 73 ~~~~~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 140 (309)
++++..... ..+..-+.|+-.|..+-....+ .++++++.|..|.+|++. ++ ...........-+
T Consensus 157 l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~-k~imsas~dt~i~lw~lk-Gq--~L~~idtnq~~n~ 232 (420)
T KOG2096|consen 157 LCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNA-KYIMSASLDTKICLWDLK-GQ--LLQSIDTNQSSNY 232 (420)
T ss_pred EEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCc-eEEEEecCCCcEEEEecC-Cc--eeeeecccccccc
Confidence 333321110 1111223466666666665555 899999999999999997 66 5666666677778
Q ss_pred EEEeccCCCCeEEEEcCCCcEEEEecCCCCCC--CCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 141 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSN--GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 141 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
..+.+| +|+++++++..-.+++|.+--.... .....+.++++|...|..++|+++.+. +++.+.||.++|||++-
T Consensus 233 ~aavSP-~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r-~vtvSkDG~wriwdtdV- 309 (420)
T KOG2096|consen 233 DAAVSP-DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTR-AVTVSKDGKWRIWDTDV- 309 (420)
T ss_pred ceeeCC-CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcce-eEEEecCCcEEEeeccc-
Confidence 889999 9999999999999999987432110 003456778999999999999999998 56999999999999876
Q ss_pred cccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh-c
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE-K 297 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-~ 297 (309)
.....+.+.....-..+ +..-...-..++++|++..|+++.+ ..++++..+ .++.+.+++ .
T Consensus 310 rY~~~qDpk~Lk~g~~p---l~aag~~p~RL~lsP~g~~lA~s~g---------s~l~~~~se------~g~~~~~~e~~ 371 (420)
T KOG2096|consen 310 RYEAGQDPKILKEGSAP---LHAAGSEPVRLELSPSGDSLAVSFG---------SDLKVFASE------DGKDYPELEDI 371 (420)
T ss_pred eEecCCCchHhhcCCcc---hhhcCCCceEEEeCCCCcEEEeecC---------CceEEEEcc------cCccchhHHHh
Confidence 32222222221111111 1122233448999999997777655 469999998 455554544 6
Q ss_pred ccceEEEeeeCC
Q 021657 298 FKAHVISCTSKP 309 (309)
Q Consensus 298 h~~~v~~~~~~P 309 (309)
|...|.+++|+|
T Consensus 372 h~~~Is~is~~~ 383 (420)
T KOG2096|consen 372 HSTTISSISYSS 383 (420)
T ss_pred hcCceeeEEecC
Confidence 889999999986
No 80
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=9.3e-31 Score=185.63 Aligned_cols=263 Identities=19% Similarity=0.245 Sum_probs=209.8
Q ss_pred ccCCCCCcceEEEEECC---CCCEEEEecCCCcEEEEeCCccccccccCCcccc--ccCCCCceeecCCCCCCCCcccCC
Q 021657 3 ILTGHQDNAEFALAMCP---TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK--SAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~---~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+..||+. +|-.++|+| +|-+|++++.|+.--+-+=+++.-.-.+...... ...-+......+.+..+-..++|+
T Consensus 9 ~c~ghtr-pvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~ 87 (334)
T KOG0278|consen 9 TCHGHTR-PVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWD 87 (334)
T ss_pred EEcCCCc-ceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhh
Confidence 4579999 888999986 7888999999998766665555333333332222 222233344555566778889999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
.-++..+..+. |..-|..++|+.|. ++|++|+.+..++|||++..+. ....+.+|.+.|..+.|.. ..+.+++++.
T Consensus 88 a~tgdelhsf~-hkhivk~~af~~ds-~~lltgg~ekllrvfdln~p~A-pp~E~~ghtg~Ir~v~wc~-eD~~iLSSad 163 (334)
T KOG0278|consen 88 AVTGDELHSFE-HKHIVKAVAFSQDS-NYLLTGGQEKLLRVFDLNRPKA-PPKEISGHTGGIRTVLWCH-EDKCILSSAD 163 (334)
T ss_pred hhhhhhhhhhh-hhheeeeEEecccc-hhhhccchHHHhhhhhccCCCC-CchhhcCCCCcceeEEEec-cCceEEeecc
Confidence 99999888876 88899999999998 8899999999999999988775 4566789999999999999 8899999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
|++||+||.++ +..++++. .+.+|+++.++++|++ + +-...+.|.+||....+.. .
T Consensus 164 d~tVRLWD~rT------gt~v~sL~-~~s~VtSlEvs~dG~i-l-Tia~gssV~Fwdaksf~~l---------------K 219 (334)
T KOG0278|consen 164 DKTVRLWDHRT------GTEVQSLE-FNSPVTSLEVSQDGRI-L-TIAYGSSVKFWDAKSFGLL---------------K 219 (334)
T ss_pred CCceEEEEecc------CcEEEEEe-cCCCCcceeeccCCCE-E-EEecCceeEEeccccccce---------------e
Confidence 99999999999 89999998 5788999999999995 4 4555788999999984432 2
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh-hcccceEEEeeeCC
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL-EKFKAHVISCTSKP 309 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~P 309 (309)
.+ .-...|.+..++|+...++ .|+.|+.++.||+. +++.+..+ ++|.++|.|+.|+|
T Consensus 220 s~-k~P~nV~SASL~P~k~~fV--------aGged~~~~kfDy~------TgeEi~~~nkgh~gpVhcVrFSP 277 (334)
T KOG0278|consen 220 SY-KMPCNVESASLHPKKEFFV--------AGGEDFKVYKFDYN------TGEEIGSYNKGHFGPVHCVRFSP 277 (334)
T ss_pred ec-cCccccccccccCCCceEE--------ecCcceEEEEEecc------CCceeeecccCCCCceEEEEECC
Confidence 22 2234688999999886555 67777999999999 67777775 89999999999998
No 81
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=4e-29 Score=191.62 Aligned_cols=236 Identities=14% Similarity=0.226 Sum_probs=194.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+|.+++-+|+|.+|+.|+..|.|++|.+. ++..+..+.+|
T Consensus 83 ~v~al~s~n~G~~l~ag~i~g~lYlWels----------------------------------------sG~LL~v~~aH 122 (476)
T KOG0646|consen 83 PVHALASSNLGYFLLAGTISGNLYLWELS----------------------------------------SGILLNVLSAH 122 (476)
T ss_pred ceeeeecCCCceEEEeecccCcEEEEEec----------------------------------------cccHHHHHHhh
Confidence 79999999999999999999999999997 45667778899
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-------CCcceEEEeeccCCceeEEEeccC-CCCeEEEEcCCCcEE
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-------GTSPVIKVEKAHDADLHCVDWNPL-DDNLILTGSADNSVR 162 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~ 162 (309)
-..|+++.|+.|| .+|+||+.||.|.+|++.. ........+..|.-+|+.+...+. ...++++++.|.+++
T Consensus 123 YQ~ITcL~fs~dg-s~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k 201 (476)
T KOG0646|consen 123 YQSITCLKFSDDG-SHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK 201 (476)
T ss_pred ccceeEEEEeCCC-cEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence 9999999999999 8899999999999998632 223367788899999999998772 246899999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccccc-CCCCCcCCCCceeeeecC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE-QGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 241 (309)
+||+.. +..+.++. ....+.+++.+|.++.+ ..|+.+|.|.+.++........ ...+........+..+.+
T Consensus 202 ~wdlS~------g~LLlti~-fp~si~av~lDpae~~~-yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~G 273 (476)
T KOG0646|consen 202 LWDLSL------GVLLLTIT-FPSSIKAVALDPAERVV-YIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVG 273 (476)
T ss_pred EEEecc------ceeeEEEe-cCCcceeEEEcccccEE-EecCCcceEEeeehhcCCcccccccccccccccceeeeecc
Confidence 999998 88887776 57789999999999965 4999999999998876431111 111112223445667889
Q ss_pred CCc--ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 242 HRD--KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 242 ~~~--~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|.. .|++++.+-|+..|+ +|+.||.|+|||+. +.++++++....++|+.+.+.|
T Consensus 274 h~~~~~ITcLais~DgtlLl--------SGd~dg~VcvWdi~------S~Q~iRtl~~~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 274 HENESAITCLAISTDGTLLL--------SGDEDGKVCVWDIY------SKQCIRTLQTSKGPVTNLQINP 329 (476)
T ss_pred ccCCcceeEEEEecCccEEE--------eeCCCCCEEEEecc------hHHHHHHHhhhccccceeEeec
Confidence 988 999999999888766 77777999999999 8899999987788999888744
No 82
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.97 E-value=1.1e-29 Score=184.37 Aligned_cols=235 Identities=23% Similarity=0.394 Sum_probs=179.1
Q ss_pred CCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 5 TGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+.|.+ .|+++.+.+ .|+++++|+.||.|.|||+++......... +.+....-.
T Consensus 40 r~HgG-svNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~l-------------------------i~k~~c~v~ 93 (397)
T KOG4283|consen 40 RPHGG-SVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGL-------------------------IAKHKCIVA 93 (397)
T ss_pred ccCCC-ccceeeeccccceEEeecCCCccEEEEEeccccchhhccc-------------------------eeheeeecc
Confidence 45777 899999998 689999999999999999986421100000 000000001
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC--CeEEEEcCCCcE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD--NLILTGSADNSV 161 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~i 161 (309)
...-.+|.-.|.++.|.|-+..+|.+++.|.++++||.++.+ ....+ ..++.|++-+++|-.. .++|+|..|-.|
T Consensus 94 ~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ--~a~~F-~me~~VYshamSp~a~sHcLiA~gtr~~~V 170 (397)
T KOG4283|consen 94 KQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQ--EAVDF-KMEGKVYSHAMSPMAMSHCLIAAGTRDVQV 170 (397)
T ss_pred ccCCccceeeeeeeEEeeecCceeecccccceEEEeecccce--eeEEe-ecCceeehhhcChhhhcceEEEEecCCCcE
Confidence 122356889999999999877899999999999999998877 33333 4567899999988322 377888889999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++.|+.. +..-+.+.+|...|.++.|+|..+++|++|+.||.|++||++...................+..-..
T Consensus 171 rLCDi~S------Gs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~a 244 (397)
T KOG4283|consen 171 RLCDIAS------GSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTA 244 (397)
T ss_pred EEEeccC------CcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccccccc
Confidence 9999999 9999999999999999999999999999999999999999998532222111111122223345678
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|.+.|+.++|+.++.+++ ++|.|..+++|+..+
T Consensus 245 h~gkvngla~tSd~~~l~--------~~gtd~r~r~wn~~~ 277 (397)
T KOG4283|consen 245 HYGKVNGLAWTSDARYLA--------SCGTDDRIRVWNMES 277 (397)
T ss_pred ccceeeeeeecccchhhh--------hccCccceEEeeccc
Confidence 999999999999999887 777889999999885
No 83
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.97 E-value=7.2e-31 Score=198.27 Aligned_cols=263 Identities=17% Similarity=0.219 Sum_probs=202.8
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccc----cCCccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA----TDPATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
..|..|.+ .|..+.|-++...|+||+.|..|++|++........ .......................+...++|+
T Consensus 169 ~~ld~h~g-ev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wn 247 (459)
T KOG0288|consen 169 FVLDAHEG-EVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWN 247 (459)
T ss_pred hhhhcccc-ccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeee
Confidence 35778999 899999999989999999999999999876642211 1111122223333344455567788999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
....+...++.+|++.|+++.|.... ..+++|+.|.+|++||+.... +..... ..+.+..+... ...+++|..
T Consensus 248 vd~~r~~~TLsGHtdkVt~ak~~~~~-~~vVsgs~DRtiK~WDl~k~~--C~kt~l-~~S~cnDI~~~---~~~~~SgH~ 320 (459)
T KOG0288|consen 248 VDSLRLRHTLSGHTDKVTAAKFKLSH-SRVVSGSADRTIKLWDLQKAY--CSKTVL-PGSQCNDIVCS---ISDVISGHF 320 (459)
T ss_pred ccchhhhhhhcccccceeeehhhccc-cceeeccccchhhhhhhhhhh--eecccc-ccccccceEec---ceeeeeccc
Confidence 99999999999999999999998876 459999999999999998866 444332 23445566653 578899999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
|++||+||++. ..+......+. .|+++..++++..++ +++.|.++.+.|++...- ..
T Consensus 321 DkkvRfwD~Rs------~~~~~sv~~gg-~vtSl~ls~~g~~lL-sssRDdtl~viDlRt~eI---------------~~ 377 (459)
T KOG0288|consen 321 DKKVRFWDIRS------ADKTRSVPLGG-RVTSLDLSMDGLELL-SSSRDDTLKVIDLRTKEI---------------RQ 377 (459)
T ss_pred ccceEEEeccC------CceeeEeecCc-ceeeEeeccCCeEEe-eecCCCceeeeecccccE---------------EE
Confidence 99999999999 77888887654 899999999999876 779999999999998322 22
Q ss_pred eecC----CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccc--eEEEeeeCC
Q 021657 238 QHAG----HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKA--HVISCTSKP 309 (309)
Q Consensus 238 ~~~~----~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~P 309 (309)
.+.+ .....+.+.|||++.|++ +|+.||.|+||++. ++++...+..... .|++++|.|
T Consensus 378 ~~sA~g~k~asDwtrvvfSpd~~Yva--------AGS~dgsv~iW~v~------tgKlE~~l~~s~s~~aI~s~~W~~ 441 (459)
T KOG0288|consen 378 TFSAEGFKCASDWTRVVFSPDGSYVA--------AGSADGSVYIWSVF------TGKLEKVLSLSTSNAAITSLSWNP 441 (459)
T ss_pred EeeccccccccccceeEECCCCceee--------eccCCCcEEEEEcc------CceEEEEeccCCCCcceEEEEEcC
Confidence 2111 122489999999888766 77777999999999 7887777765444 599999987
No 84
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=6.2e-30 Score=214.49 Aligned_cols=250 Identities=23% Similarity=0.413 Sum_probs=197.6
Q ss_pred cCCCCCcceEEEEECCCCCEEEEec--CCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGG--KDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+-+|.+..|.+++.+|+|..++||+ .||.++||+.+.-... ...++..-.
T Consensus 8 wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~----------------------------~~~~~~~l~ 59 (942)
T KOG0973|consen 8 WVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDE----------------------------KEEKNENLP 59 (942)
T ss_pred ccccCCeeEEEEEecCCceeEecCCccccccceeeccccccch----------------------------hhhhhcccc
Confidence 4567777899999999999999999 9999999998632100 011111123
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC----------C------CcceEEEeeccCCceeEEEec
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV----------G------TSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~------~~~~~~~~~~~~~~v~~~~~~ 145 (309)
+.+..+..|.+.|+|+.|+|+| .+||+|++|+.|.||+... + .......+.+|...|..++|+
T Consensus 60 k~l~~m~~h~~sv~CVR~S~dG-~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Ws 138 (942)
T KOG0973|consen 60 KHLCTMDDHDGSVNCVRFSPDG-SYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWS 138 (942)
T ss_pred hhheeeccccCceeEEEECCCC-CeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccC
Confidence 4566778899999999999999 8999999999999999872 0 123567788999999999999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
| ++.+|++++.|++|.+|+.++ .+.+..+.+|.+.|-.+.|.|-|+| ||+-+.|++|+||++..++-....
T Consensus 139 p-~~~~lvS~s~DnsViiwn~~t------F~~~~vl~~H~s~VKGvs~DP~Gky-~ASqsdDrtikvwrt~dw~i~k~I- 209 (942)
T KOG0973|consen 139 P-DDSLLVSVSLDNSVIIWNAKT------FELLKVLRGHQSLVKGVSWDPIGKY-FASQSDDRTLKVWRTSDWGIEKSI- 209 (942)
T ss_pred C-CccEEEEecccceEEEEcccc------ceeeeeeecccccccceEECCccCe-eeeecCCceEEEEEcccceeeEee-
Confidence 9 999999999999999999999 8899999999999999999999997 789999999999998774332111
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEe
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISC 305 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~ 305 (309)
..-+....-......+.|+|+|.+|++..+.+ +.-.++.|.+-. +-+.-..|-||.+++.++
T Consensus 210 --------t~pf~~~~~~T~f~RlSWSPDG~~las~nA~n----~~~~~~~IieR~------tWk~~~~LvGH~~p~evv 271 (942)
T KOG0973|consen 210 --------TKPFEESPLTTFFLRLSWSPDGHHLASPNAVN----GGKSTIAIIERG------TWKVDKDLVGHSAPVEVV 271 (942)
T ss_pred --------ccchhhCCCcceeeecccCCCcCeecchhhcc----CCcceeEEEecC------CceeeeeeecCCCceEEE
Confidence 00111112234678999999999887665543 333567777766 555667788999999999
Q ss_pred eeCC
Q 021657 306 TSKP 309 (309)
Q Consensus 306 ~~~P 309 (309)
.|+|
T Consensus 272 rFnP 275 (942)
T KOG0973|consen 272 RFNP 275 (942)
T ss_pred EeCh
Confidence 9998
No 85
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.5e-29 Score=204.51 Aligned_cols=218 Identities=23% Similarity=0.384 Sum_probs=182.7
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+.++|.+ +|++++.+||+..++|||.|.+|++||..-........ . ++. ..
T Consensus 448 Eti~AHdg-aIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~---------------------~---k~l---sl 499 (888)
T KOG0306|consen 448 ETIRAHDG-AIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQ---------------------K---KVL---SL 499 (888)
T ss_pred hhhhcccc-ceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCccc---------------------c---eee---ee
Confidence 46789999 99999999999999999999999999986321100000 0 000 00
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
....++ .-...|.|+.++||+ .+|+.+--|.+++||-+.+-+ ....+.+|.-||.||..+| +++.+++|+.|.+|
T Consensus 500 ~~~rtL-el~ddvL~v~~Spdg-k~LaVsLLdnTVkVyflDtlK--FflsLYGHkLPV~smDIS~-DSklivTgSADKnV 574 (888)
T KOG0306|consen 500 KHTRTL-ELEDDVLCVSVSPDG-KLLAVSLLDNTVKVYFLDTLK--FFLSLYGHKLPVLSMDISP-DSKLIVTGSADKNV 574 (888)
T ss_pred ccceEE-eccccEEEEEEcCCC-cEEEEEeccCeEEEEEeccee--eeeeecccccceeEEeccC-CcCeEEeccCCCce
Confidence 011111 235679999999999 899999999999999999888 7888999999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++|-+.- |.+-..+.+|...|.++.|.|... +|.+++.|+.|+-||-.+ ...+..+.+
T Consensus 575 KiWGLdF------GDCHKS~fAHdDSvm~V~F~P~~~-~FFt~gKD~kvKqWDg~k---------------Fe~iq~L~~ 632 (888)
T KOG0306|consen 575 KIWGLDF------GDCHKSFFAHDDSVMSVQFLPKTH-LFFTCGKDGKVKQWDGEK---------------FEEIQKLDG 632 (888)
T ss_pred EEecccc------chhhhhhhcccCceeEEEEcccce-eEEEecCcceEEeechhh---------------hhhheeecc
Confidence 9999998 899999999999999999999766 566999999999999887 556788999
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|...|++++.+|+|.+++ |++.|.+|++|...+
T Consensus 633 H~~ev~cLav~~~G~~vv--------s~shD~sIRlwE~td 665 (888)
T KOG0306|consen 633 HHSEVWCLAVSPNGSFVV--------SSSHDKSIRLWERTD 665 (888)
T ss_pred chheeeeeEEcCCCCeEE--------eccCCceeEeeeccC
Confidence 999999999999998766 666669999999775
No 86
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=4.7e-30 Score=188.36 Aligned_cols=218 Identities=23% Similarity=0.437 Sum_probs=184.8
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
++.|.||++ .|+.++.....+.+.+++.|.+.+||.++ +
T Consensus 141 vre~~GHkD-GiW~Vaa~~tqpi~gtASADhTA~iWs~E----------------------------------------s 179 (481)
T KOG0300|consen 141 VRELEGHKD-GIWHVAADSTQPICGTASADHTARIWSLE----------------------------------------S 179 (481)
T ss_pred hhhhccccc-ceeeehhhcCCcceeecccccceeEEeec----------------------------------------c
Confidence 367899999 79999998888899999999999999998 4
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEc------CCC--------------------------C---
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA------RVG--------------------------T--- 125 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~------~~~--------------------------~--- 125 (309)
+.++..+.+|.+.|++++|++.+ .++++++.|++..||.. .+. +
T Consensus 180 g~CL~~Y~GH~GSVNsikfh~s~-~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~ 258 (481)
T KOG0300|consen 180 GACLATYTGHTGSVNSIKFHNSG-LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDG 258 (481)
T ss_pred ccceeeecccccceeeEEecccc-ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCC
Confidence 56677788999999999999998 89999999999999962 110 0
Q ss_pred ---cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEE
Q 021657 126 ---SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 202 (309)
Q Consensus 126 ---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 202 (309)
..+...+.+|...|.+..|.. .++.+++++.|.+..+||+++ +.++..+.+|....+.++-+|..+ |++
T Consensus 259 ~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEt------ge~v~~LtGHd~ELtHcstHptQr-LVv 330 (481)
T KOG0300|consen 259 HTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVET------GEVVNILTGHDSELTHCSTHPTQR-LVV 330 (481)
T ss_pred ceeeeeeeeeeccccceEehhhhc-Ccceeeeeeccccceeeeecc------CceeccccCcchhccccccCCcce-EEE
Confidence 024456789999999999999 999999999999999999999 999999999999999999999988 677
Q ss_pred EecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 203 SSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 203 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.+.|.+.++||++.. .+.+..+++|...|+++.|..++. ++++| .|.+|++||+++
T Consensus 331 TsSrDtTFRLWDFRea--------------I~sV~VFQGHtdtVTS~vF~~dd~--vVSgS-------DDrTvKvWdLrN 387 (481)
T KOG0300|consen 331 TSSRDTTFRLWDFREA--------------IQSVAVFQGHTDTVTSVVFNTDDR--VVSGS-------DDRTVKVWDLRN 387 (481)
T ss_pred EeccCceeEeccchhh--------------cceeeeecccccceeEEEEecCCc--eeecC-------CCceEEEeeecc
Confidence 9999999999999862 345678899999999999998654 55455 459999999997
Q ss_pred cccCChhhHhHhhh
Q 021657 283 LIYRPQDEVLAELE 296 (309)
Q Consensus 283 ~~~~~~~~~~~~~~ 296 (309)
+ ..++.++.
T Consensus 388 M-----RsplATIR 396 (481)
T KOG0300|consen 388 M-----RSPLATIR 396 (481)
T ss_pred c-----cCcceeee
Confidence 3 44455443
No 87
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.97 E-value=5.2e-29 Score=189.49 Aligned_cols=230 Identities=18% Similarity=0.356 Sum_probs=182.4
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
|++|+||.. .|+.+.|+|+...+++++.|-.|+||.....
T Consensus 254 l~~~~Gh~k-ki~~v~~~~~~~~v~~aSad~~i~vws~~~~--------------------------------------- 293 (506)
T KOG0289|consen 254 LATLKGHTK-KITSVKFHKDLDTVITASADEIIRVWSVPLS--------------------------------------- 293 (506)
T ss_pred hhhccCcce-EEEEEEeccchhheeecCCcceEEeeccccc---------------------------------------
Confidence 468999999 8999999999999999999999999998632
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
........|..+|+.+..+|.| .+|+++++||+....|++++.......-....-.+++.+|+| +|.+|.+|..||.
T Consensus 294 -s~~~~~~~h~~~V~~ls~h~tg-eYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~ 370 (506)
T KOG0289|consen 294 -SEPTSSRPHEEPVTGLSLHPTG-EYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGV 370 (506)
T ss_pred -cCccccccccccceeeeeccCC-cEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCce
Confidence 1234566799999999999999 889999999999999999998432222222345699999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
++|||+.. ...+..|.+|.++|..|+|+.+|-+ +|++++|+.|++||+|+... +.++.
T Consensus 371 vkiwdlks------~~~~a~Fpght~~vk~i~FsENGY~-Lat~add~~V~lwDLRKl~n---------------~kt~~ 428 (506)
T KOG0289|consen 371 VKIWDLKS------QTNVAKFPGHTGPVKAISFSENGYW-LATAADDGSVKLWDLRKLKN---------------FKTIQ 428 (506)
T ss_pred EEEEEcCC------ccccccCCCCCCceeEEEeccCceE-EEEEecCCeEEEEEehhhcc---------------cceee
Confidence 99999999 7789999999999999999999997 57999999999999998331 11111
Q ss_pred -CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 241 -GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 241 -~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
.....+.++.|.+.|.+|.+. |.|=.|++++-.. .+-.++.++.-|.+..+++.|
T Consensus 429 l~~~~~v~s~~fD~SGt~L~~~--------g~~l~Vy~~~k~~----k~W~~~~~~~~~sg~st~v~F 484 (506)
T KOG0289|consen 429 LDEKKEVNSLSFDQSGTYLGIA--------GSDLQVYICKKKT----KSWTEIKELADHSGLSTGVRF 484 (506)
T ss_pred ccccccceeEEEcCCCCeEEee--------cceeEEEEEeccc----ccceeeehhhhcccccceeee
Confidence 123379999999999987744 3333444444221 134566777777777777665
No 88
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=1.7e-28 Score=216.64 Aligned_cols=223 Identities=17% Similarity=0.231 Sum_probs=167.8
Q ss_pred cccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+.+.+|.+ .|++++|+| ++.+|+||+.||+|++||+.++
T Consensus 569 ~~~~~H~~-~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~--------------------------------------- 608 (793)
T PLN00181 569 TEMKEHEK-RVWSIDYSSADPTLLASGSDDGSVKLWSINQG--------------------------------------- 608 (793)
T ss_pred EEecCCCC-CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC---------------------------------------
Confidence 46789998 899999997 7899999999999999999743
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
..+..+.. ...|.++.|++..+.+|++|+.||.|++||++..+. ....+.+|...|.+++|. ++.+|++++.|++
T Consensus 609 -~~~~~~~~-~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~-~~~~~~~h~~~V~~v~f~--~~~~lvs~s~D~~ 683 (793)
T PLN00181 609 -VSIGTIKT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL-PLCTMIGHSKTVSYVRFV--DSSTLVSSSTDNT 683 (793)
T ss_pred -cEEEEEec-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc-cceEecCCCCCEEEEEEe--CCCEEEEEECCCE
Confidence 12233333 357899999765448999999999999999987653 345667899999999996 4788999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|++||++.........++..+.+|...+..++|+|++.+ +++|+.|+.|++|+............... . ...-....
T Consensus 684 ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~-lasgs~D~~v~iw~~~~~~~~~s~~~~~~-~-~~~~~~~~ 760 (793)
T PLN00181 684 LKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGY-IATGSETNEVFVYHKAFPMPVLSYKFKTI-D-PVSGLEVD 760 (793)
T ss_pred EEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCE-EEEEeCCCEEEEEECCCCCceEEEecccC-C-cccccccC
Confidence 999999853211114678889999999999999999985 68999999999999865321110000000 0 00001224
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
.|...|.+++|+|++..++ +|+.||.|+||++
T Consensus 761 ~~~~~V~~v~ws~~~~~lv--------a~~~dG~I~i~~~ 792 (793)
T PLN00181 761 DASQFISSVCWRGQSSTLV--------AANSTGNIKILEM 792 (793)
T ss_pred CCCcEEEEEEEcCCCCeEE--------EecCCCcEEEEec
Confidence 5667899999999888766 5555699999996
No 89
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=6.2e-29 Score=190.29 Aligned_cols=237 Identities=18% Similarity=0.347 Sum_probs=184.5
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
++|.+ .|.+++.++||+||++|+.|..|.||+.+ +.+++
T Consensus 199 ~~h~k-eil~~avS~Dgkylatgg~d~~v~Iw~~~----------------------------------------t~ehv 237 (479)
T KOG0299|consen 199 KGHVK-EILTLAVSSDGKYLATGGRDRHVQIWDCD----------------------------------------TLEHV 237 (479)
T ss_pred ccccc-eeEEEEEcCCCcEEEecCCCceEEEecCc----------------------------------------ccchh
Confidence 37888 89999999999999999999999999997 55667
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
+.+.+|.+.|.+++|-..- ..+++++.|+.|++|++.... .+.++.+|++.|.++.... -++.+-+|+.|+++++|
T Consensus 238 ~~~~ghr~~V~~L~fr~gt-~~lys~s~Drsvkvw~~~~~s--~vetlyGHqd~v~~IdaL~-reR~vtVGgrDrT~rlw 313 (479)
T KOG0299|consen 238 KVFKGHRGAVSSLAFRKGT-SELYSASADRSVKVWSIDQLS--YVETLYGHQDGVLGIDALS-RERCVTVGGRDRTVRLW 313 (479)
T ss_pred hcccccccceeeeeeecCc-cceeeeecCCceEEEehhHhH--HHHHHhCCccceeeechhc-ccceEEeccccceeEEE
Confidence 7889999999999997644 779999999999999998877 7888999999999999887 77888888899999999
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
++.. .....+.++.+.+.|++|-.+.. |++|+.||.|.+|++.+.+............+ ......+..
T Consensus 314 Ki~e-------esqlifrg~~~sidcv~~In~~H--fvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~---~~~~~~~~~ 381 (479)
T KOG0299|consen 314 KIPE-------ESQLIFRGGEGSIDCVAFINDEH--FVSGSDNGSIALWSLLKKKPLFTSRLAHGVIP---ELDPVNGNF 381 (479)
T ss_pred eccc-------cceeeeeCCCCCeeeEEEecccc--eeeccCCceEEEeeecccCceeEeeccccccC---Ccccccccc
Confidence 9954 44456777888999999988776 56999999999999988433322111110000 001112335
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+|++++..|..+ |++ +|+.+|.|++|.+.+... ...++..+. ..+.|.+++|++
T Consensus 382 Witsla~i~~sd-L~a-------sGS~~G~vrLW~i~~g~r--~i~~l~~ls-~~GfVNsl~f~~ 435 (479)
T KOG0299|consen 382 WITSLAVIPGSD-LLA-------SGSWSGCVRLWKIEDGLR--AINLLYSLS-LVGFVNSLAFSN 435 (479)
T ss_pred ceeeeEecccCc-eEE-------ecCCCCceEEEEecCCcc--ccceeeecc-cccEEEEEEEcc
Confidence 899999999554 666 555669999999985321 245556665 668899998864
No 90
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.6e-28 Score=179.09 Aligned_cols=259 Identities=16% Similarity=0.245 Sum_probs=193.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.++.|+|.+..|+.++.||++++||+........+........-.-........+..++.++.+|..+.... .+..|
T Consensus 15 ~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~-~igth 93 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNED-QIGTH 93 (323)
T ss_pred ceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCcce-eeccC
Confidence 79999999999999999999999999998764433333222221111111233445667888899888877654 45679
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
..+|.||.+++.. ..+++|+.|++|++||.+... ....+. ....|.++.. .++.|++|+.+..+.+||+|++.
T Consensus 94 ~~~i~ci~~~~~~-~~vIsgsWD~~ik~wD~R~~~--~~~~~d-~~kkVy~~~v---~g~~LvVg~~~r~v~iyDLRn~~ 166 (323)
T KOG1036|consen 94 DEGIRCIEYSYEV-GCVISGSWDKTIKFWDPRNKV--VVGTFD-QGKKVYCMDV---SGNRLVVGTSDRKVLIYDLRNLD 166 (323)
T ss_pred CCceEEEEeeccC-CeEEEcccCccEEEEeccccc--cccccc-cCceEEEEec---cCCEEEEeecCceEEEEEccccc
Confidence 9999999999866 789999999999999998643 233332 3447888877 67899999999999999999953
Q ss_pred CCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC------
Q 021657 171 SNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR------ 243 (309)
Q Consensus 171 ~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 243 (309)
.+.+. -...+-.++++++-|++.- +++++-||.|.+=.++...+. ....+.++.|.
T Consensus 167 -----~~~q~reS~lkyqtR~v~~~pn~eG-y~~sSieGRVavE~~d~s~~~-----------~skkyaFkCHr~~~~~~ 229 (323)
T KOG1036|consen 167 -----EPFQRRESSLKYQTRCVALVPNGEG-YVVSSIEGRVAVEYFDDSEEA-----------QSKKYAFKCHRLSEKDT 229 (323)
T ss_pred -----chhhhccccceeEEEEEEEecCCCc-eEEEeecceEEEEccCCchHH-----------hhhceeEEeeecccCCc
Confidence 22211 1234567899999998876 679999999998777663111 12345556664
Q ss_pred ---cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 244 ---DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 244 ---~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
-+|++++|+|-.+.++ |||.||.|.+||+. +.+.+.++.+.+..|.+++|+
T Consensus 230 ~~~yPVNai~Fhp~~~tfa--------TgGsDG~V~~Wd~~------~rKrl~q~~~~~~SI~slsfs 283 (323)
T KOG1036|consen 230 EIIYPVNAIAFHPIHGTFA--------TGGSDGIVNIWDLF------NRKRLKQLAKYETSISSLSFS 283 (323)
T ss_pred eEEEEeceeEeccccceEE--------ecCCCceEEEccCc------chhhhhhccCCCCceEEEEec
Confidence 3799999999877666 88888999999999 788899998888889999885
No 91
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=8.7e-30 Score=206.43 Aligned_cols=212 Identities=25% Similarity=0.521 Sum_probs=176.5
Q ss_pred cccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
..|..|+. .|++++|++. ..+|++||+||+|++||++..
T Consensus 127 ~~f~EH~R-s~~~ldfh~tep~iliSGSQDg~vK~~DlR~~--------------------------------------- 166 (839)
T KOG0269|consen 127 TVFNEHER-SANKLDFHSTEPNILISGSQDGTVKCWDLRSK--------------------------------------- 166 (839)
T ss_pred hHhhhhcc-ceeeeeeccCCccEEEecCCCceEEEEeeecc---------------------------------------
Confidence 46789999 8999999995 567889999999999999843
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
+....+.+....|.++.|+|..+..|+++.+.|.+++||++.... ....+.+|.++|.|+.|+| ++.+||+|+.|+.
T Consensus 167 -~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r-~~~k~~AH~GpV~c~nwhP-nr~~lATGGRDK~ 243 (839)
T KOG0269|consen 167 -KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR-CEKKLTAHNGPVLCLNWHP-NREWLATGGRDKM 243 (839)
T ss_pred -cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh-HHHHhhcccCceEEEeecC-CCceeeecCCCcc
Confidence 334455667789999999998779999999999999999998764 5667789999999999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec--CCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA--EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
|+|||+.... .+++.++. ...++.+++|-|+.++.||+++ .|-.|+|||++. |..+...
T Consensus 244 vkiWd~t~~~----~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR--------------PYIP~~t 304 (839)
T KOG0269|consen 244 VKIWDMTDSR----AKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRR--------------PYIPYAT 304 (839)
T ss_pred EEEEeccCCC----ccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeecc--------------cccccee
Confidence 9999998643 45555665 4678999999999999898876 478899999987 3456778
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+..|...++.++|...+..++.++|.| |+|..-.+++
T Consensus 305 ~~eH~~~vt~i~W~~~d~~~l~s~sKD-------~tv~qh~~kn 341 (839)
T KOG0269|consen 305 FLEHTDSVTGIAWDSGDRINLWSCSKD-------GTVLQHLFKN 341 (839)
T ss_pred eeccCccccceeccCCCceeeEeecCc-------cHHHHhhhhc
Confidence 899999999999988667777766666 6665555543
No 92
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=9.6e-29 Score=203.68 Aligned_cols=218 Identities=23% Similarity=0.431 Sum_probs=187.0
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.+|....+.+..|+ +.++++++.|++|++||..+. .
T Consensus 202 ~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~----------------------------------------~ 239 (537)
T KOG0274|consen 202 VLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNG----------------------------------------Y 239 (537)
T ss_pred eecccCcchhhhheee--cCeEEecCCCceeEEeecccc----------------------------------------e
Confidence 3455555578888887 678999999999999998743 3
Q ss_pred cccc-cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 83 PRGI-YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 83 ~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.+.. +.+|.+.|+++++.. +..++++|+.|.++++||..+++ +...+.+|.+.+.++... +..+++|+.|.+|
T Consensus 240 ~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~--C~~~l~gh~stv~~~~~~---~~~~~sgs~D~tV 313 (537)
T KOG0274|consen 240 LILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGE--CTHSLQGHTSSVRCLTID---PFLLVSGSRDNTV 313 (537)
T ss_pred EEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCc--EEEEecCCCceEEEEEcc---CceEeeccCCceE
Confidence 3334 889999999999976 44889999999999999999999 899999999999999874 4788889999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++|++.+ +..+..+.+|..+|+++..+ +. ++++|+.|+.|++||+.. .+++..+.+
T Consensus 314 kVW~v~n------~~~l~l~~~h~~~V~~v~~~--~~-~lvsgs~d~~v~VW~~~~---------------~~cl~sl~g 369 (537)
T KOG0274|consen 314 KVWDVTN------GACLNLLRGHTGPVNCVQLD--EP-LLVSGSYDGTVKVWDPRT---------------GKCLKSLSG 369 (537)
T ss_pred EEEeccC------cceEEEeccccccEEEEEec--CC-EEEEEecCceEEEEEhhh---------------ceeeeeecC
Confidence 9999999 89999999999999999998 44 467999999999999997 677889999
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChh-hHhHhhhcccceEEEeee
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQD-EVLAELEKFKAHVISCTS 307 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~ 307 (309)
|..+|+++.+.+. ..++ +|+.|++|++||+. +. +++.++.+|..-|..+.+
T Consensus 370 H~~~V~sl~~~~~-~~~~--------Sgs~D~~IkvWdl~------~~~~c~~tl~~h~~~v~~l~~ 421 (537)
T KOG0274|consen 370 HTGRVYSLIVDSE-NRLL--------SGSLDTTIKVWDLR------TKRKCIHTLQGHTSLVSSLLL 421 (537)
T ss_pred CcceEEEEEecCc-ceEE--------eeeeccceEeecCC------chhhhhhhhcCCccccccccc
Confidence 9999999988864 4444 55666999999999 66 899999999988876654
No 93
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.1e-28 Score=178.18 Aligned_cols=205 Identities=20% Similarity=0.388 Sum_probs=155.5
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.+|.+ +|++++. ++.++|+||.|-+|+|||+... .
T Consensus 38 ~~~aH~~-sitavAV--s~~~~aSGssDetI~IYDm~k~----------------------------------------~ 74 (362)
T KOG0294|consen 38 AFSAHAG-SITALAV--SGPYVASGSSDETIHIYDMRKR----------------------------------------K 74 (362)
T ss_pred ccccccc-ceeEEEe--cceeEeccCCCCcEEEEeccch----------------------------------------h
Confidence 4678999 8999999 5899999999999999999842 3
Q ss_pred cccccccccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.+..+-.|.+.|+++.|.+.- ...|++|+.||.|.+|+...-. ....+++|...|+.++.+| .+++.++.+.|+.+
T Consensus 75 qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~--~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~l 151 (362)
T KOG0294|consen 75 QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWE--LLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVL 151 (362)
T ss_pred hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeE--EeeeecccccccceeEecC-CCceEEEEcCCcee
Confidence 345566799999999998764 2379999999999999986655 8999999999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCc--------------------------------------EEEE
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS--------------------------------------VFGS 203 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------------------------------l~~~ 203 (309)
+.||+-.. +.-..+.- ....+.+.|+|.|.+ .+++
T Consensus 152 r~WNLV~G------r~a~v~~L-~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~v 224 (362)
T KOG0294|consen 152 RTWNLVRG------RVAFVLNL-KNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLV 224 (362)
T ss_pred eeehhhcC------ccceeecc-CCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEE
Confidence 99999773 22221110 111122344443332 1346
Q ss_pred ecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE-EccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH-WNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 204 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|++|+.|.+||... ..+...+.+|..+|.++. +.....++++++|.| |.|+|||++.
T Consensus 225 G~d~~~i~~~D~ds---------------~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSD-------G~I~vWd~~~ 282 (362)
T KOG0294|consen 225 GGDNEWISLKDTDS---------------DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSD-------GFIKVWDIDM 282 (362)
T ss_pred ecCCceEEEeccCC---------------CccceeeecchhheeeeEEEecCCceEEEEeccC-------ceEEEEEccc
Confidence 66667777777665 345677899999999998 443345667755554 9999999984
No 94
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=3.1e-29 Score=186.69 Aligned_cols=244 Identities=19% Similarity=0.324 Sum_probs=190.5
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+++++|.+ .|..|+++. ..+++++.|++|+.|.++.+ ............+....-........+..+.+|+....
T Consensus 103 ~~f~AH~G-~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~--p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~ 177 (433)
T KOG0268|consen 103 RTFKAHEG-LVRGICVTQ--TSFFTVGDDKTVKQWKIDGP--PLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRD 177 (433)
T ss_pred heeecccC-ceeeEEecc--cceEEecCCcceeeeeccCC--cceeeeccccccccccccccccccccCceeeecccccC
Confidence 57899999 999999976 77999999999999998763 11111111112222222223334556778999999999
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.|+..+.--...|.++.|+|....+|++|+.|+.|.|||+++... .+... ..-.-+.++|+| +...|++|+.|..+
T Consensus 178 ~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~P--l~KVi-~~mRTN~IswnP-eafnF~~a~ED~nl 253 (433)
T KOG0268|consen 178 NPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASP--LKKVI-LTMRTNTICWNP-EAFNFVAANEDHNL 253 (433)
T ss_pred CccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCc--cceee-eeccccceecCc-cccceeeccccccc
Confidence 999999988899999999999888999999999999999998873 32221 123456899999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+.||++.. ..++....+|.+.|.+++|+|.|+- |++|+.|.+|+||..+.... .. ++ ..-
T Consensus 254 Y~~DmR~l-----~~p~~v~~dhvsAV~dVdfsptG~E-fvsgsyDksIRIf~~~~~~S-Rd------------iY-htk 313 (433)
T KOG0268|consen 254 YTYDMRNL-----SRPLNVHKDHVSAVMDVDFSPTGQE-FVSGSYDKSIRIFPVNHGHS-RD------------IY-HTK 313 (433)
T ss_pred eehhhhhh-----cccchhhcccceeEEEeccCCCcch-hccccccceEEEeecCCCcc-hh------------hh-hHh
Confidence 99999996 6788899999999999999999996 67999999999999987211 10 10 112
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+.|.++.|+-|..+++ ||+.|+.|++|....
T Consensus 314 RMq~V~~Vk~S~Dskyi~--------SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 314 RMQHVFCVKYSMDSKYII--------SGSDDGNVRLWKAKA 346 (433)
T ss_pred hhheeeEEEEeccccEEE--------ecCCCcceeeeecch
Confidence 345799999999888766 666669999999774
No 95
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=1.3e-27 Score=167.61 Aligned_cols=239 Identities=15% Similarity=0.227 Sum_probs=167.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+|.+++|+|.|.+.+.|+..+++||-....-............ . ..-..+.-+.|
T Consensus 34 airav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~----p---------------------p~v~~kr~khh 88 (350)
T KOG0641|consen 34 AIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQ----P---------------------PSVLCKRNKHH 88 (350)
T ss_pred heeeEEecCCCceEEeccCCceEEEEccccccCcccccccccC----C---------------------CeEEeeecccc
Confidence 6999999999999999999999998765432211111100000 0 00001223457
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-------------------------------------------
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP------------------------------------------- 127 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------------------------------------- 127 (309)
.+.|.|.+|+|.| .++++|++|.+|++.-++.....
T Consensus 89 kgsiyc~~ws~~g-eliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~ 167 (350)
T KOG0641|consen 89 KGSIYCTAWSPCG-ELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYI 167 (350)
T ss_pred CccEEEEEecCcc-CeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEE
Confidence 8888888888888 78888888888888765432210
Q ss_pred -------eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc-------CCCCeeEEEE
Q 021657 128 -------VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG-------HSAAVLCVQW 193 (309)
Q Consensus 128 -------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~ 193 (309)
...-+.+|.+.|.++- +- ++-++++|+.|.+|++||++. ..++.++.. ....|.+++.
T Consensus 168 tdc~~g~~~~a~sghtghilaly-sw-n~~m~~sgsqdktirfwdlrv------~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 168 TDCGRGQGFHALSGHTGHILALY-SW-NGAMFASGSQDKTIRFWDLRV------NSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred eecCCCCcceeecCCcccEEEEE-Ee-cCcEEEccCCCceEEEEeeec------cceeeeccCcccCCCcccceeEEEEE
Confidence 1222334555444441 22 577899999999999999998 555655532 2367999999
Q ss_pred ecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCC
Q 021657 194 SPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGG 273 (309)
Q Consensus 194 ~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg 273 (309)
.|.|+ |+++|-.|....+||++. ..++..+..|...|.++.|+|. .++++++|.| .
T Consensus 240 dpsgr-ll~sg~~dssc~lydirg---------------~r~iq~f~phsadir~vrfsp~-a~yllt~syd-------~ 295 (350)
T KOG0641|consen 240 DPSGR-LLASGHADSSCMLYDIRG---------------GRMIQRFHPHSADIRCVRFSPG-AHYLLTCSYD-------M 295 (350)
T ss_pred CCCcc-eeeeccCCCceEEEEeeC---------------CceeeeeCCCccceeEEEeCCC-ceEEEEeccc-------c
Confidence 99999 688999999999999998 5677888999999999999995 4555555555 9
Q ss_pred eEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 274 TLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 274 ~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.|++-|+.... ...-++..+..|++.+..+.|||
T Consensus 296 ~ikltdlqgdl--a~el~~~vv~ehkdk~i~~rwh~ 329 (350)
T KOG0641|consen 296 KIKLTDLQGDL--AHELPIMVVAEHKDKAIQCRWHP 329 (350)
T ss_pred eEEEeecccch--hhcCceEEEEeccCceEEEEecC
Confidence 99999997211 01122334457999999999997
No 96
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.4e-28 Score=206.52 Aligned_cols=247 Identities=20% Similarity=0.350 Sum_probs=188.8
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.++..|.+ .|+|+.|+|||++||+|+.|+.|.||+... ... ..........-+.+..
T Consensus 63 ~~m~~h~~-sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~-~~~---------------------~~~fgs~g~~~~vE~w 119 (942)
T KOG0973|consen 63 CTMDDHDG-SVNCVRFSPDGSYLASGSDDRLVMIWERAE-IGS---------------------GTVFGSTGGAKNVESW 119 (942)
T ss_pred eeeccccC-ceeEEEECCCCCeEeeccCcceEEEeeecc-cCC---------------------ccccccccccccccee
Confidence 45678998 899999999999999999999999999863 100 0000111122244566
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+.+..+.+|...|.+++|+|++ .+|++++.|++|.|||..+.+ ....+.+|...|-.+.|+| -|++|++-+.|++|
T Consensus 120 k~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsViiwn~~tF~--~~~vl~~H~s~VKGvs~DP-~Gky~ASqsdDrti 195 (942)
T KOG0973|consen 120 KVVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVIIWNAKTFE--LLKVLRGHQSLVKGVSWDP-IGKYFASQSDDRTL 195 (942)
T ss_pred eEEEEEecCCCccceeccCCCc-cEEEEecccceEEEEccccce--eeeeeecccccccceEECC-ccCeeeeecCCceE
Confidence 7788899999999999999988 999999999999999999986 8899999999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccC------CCCeeEEEEecCCCcEEEEecCC---CcEEEEeCCcccccccCCCCCcCCC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGH------SAAVLCVQWSPDKSSVFGSSAED---GLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
+||+..+ ....+.+..+ ...+..+.|+|||.+|.+.-+.+ .++.|.+..+
T Consensus 196 kvwrt~d------w~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~t--------------- 254 (942)
T KOG0973|consen 196 KVWRTSD------WGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGT--------------- 254 (942)
T ss_pred EEEEccc------ceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCC---------------
Confidence 9999776 4455554432 34578999999999854333333 3466666655
Q ss_pred CceeeeecCCCcceeeEEEccC------C---------Ce-EEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 233 AGLFFQHAGHRDKVVDFHWNAS------D---------PW-TVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~------~---------~~-~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
...-..+-||..++..+.|+|. . .+ ++|+|| .|++|.||... ..+++....
T Consensus 255 Wk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgS-------qDrSlSVW~T~------~~RPl~vi~ 321 (942)
T KOG0973|consen 255 WKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGS-------QDRSLSVWNTA------LPRPLFVIH 321 (942)
T ss_pred ceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEec-------CCccEEEEecC------CCCchhhhh
Confidence 2334567899999999999982 1 12 566444 55999999997 455544332
Q ss_pred -cccceEEEeeeCC
Q 021657 297 -KFKAHVISCTSKP 309 (309)
Q Consensus 297 -~h~~~v~~~~~~P 309 (309)
-....|.++.|+|
T Consensus 322 ~lf~~SI~DmsWsp 335 (942)
T KOG0973|consen 322 NLFNKSIVDMSWSP 335 (942)
T ss_pred hhhcCceeeeeEcC
Confidence 3456899999987
No 97
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=9.2e-30 Score=189.44 Aligned_cols=265 Identities=18% Similarity=0.287 Sum_probs=180.8
Q ss_pred CcccCCCCCcceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
|..|.||.+ -|.|++=+|.. ..+++|+.||.|+|||+....+...+........+-......+.....+..++.|...
T Consensus 59 v~~L~gHrd-GV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~ 137 (433)
T KOG0268|consen 59 VGSLDGHRD-GVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKID 137 (433)
T ss_pred hhhcccccc-ccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeecc
Confidence 356899999 69999999977 7799999999999999987654444433221111100000122222334445555433
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
. .+..++.+ ...+..+.-+..+ ..|+|||.+ |.|||.+-.. ++..+.-....|.++.|+|.....|++++.|+
T Consensus 138 ~-~p~~tilg-~s~~~gIdh~~~~-~~FaTcGe~--i~IWD~~R~~--Pv~smswG~Dti~svkfNpvETsILas~~sDr 210 (433)
T KOG0268|consen 138 G-PPLHTILG-KSVYLGIDHHRKN-SVFATCGEQ--IDIWDEQRDN--PVSSMSWGADSISSVKFNPVETSILASCASDR 210 (433)
T ss_pred C-Ccceeeec-ccccccccccccc-ccccccCce--eeecccccCC--ccceeecCCCceeEEecCCCcchheeeeccCC
Confidence 3 13333332 2334455544444 567776653 6777765544 45555556678999999997788999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|.+||+|+ ..++..... .-.-+.|+|+|.. +.|++|++|..++.||++.... ++..+
T Consensus 211 sIvLyD~R~------~~Pl~KVi~-~mRTN~IswnPea-fnF~~a~ED~nlY~~DmR~l~~--------------p~~v~ 268 (433)
T KOG0268|consen 211 SIVLYDLRQ------ASPLKKVIL-TMRTNTICWNPEA-FNFVAANEDHNLYTYDMRNLSR--------------PLNVH 268 (433)
T ss_pred ceEEEeccc------CCccceeee-eccccceecCccc-cceeeccccccceehhhhhhcc--------------cchhh
Confidence 999999999 777776652 3456789999954 4688999999999999998433 45677
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
.+|.+.|.++.|+|.|..++ ||+.|.+|+||.++... +.+...+ .--..|.++.|+
T Consensus 269 ~dhvsAV~dVdfsptG~Efv--------sgsyDksIRIf~~~~~~---SRdiYht--kRMq~V~~Vk~S 324 (433)
T KOG0268|consen 269 KDHVSAVMDVDFSPTGQEFV--------SGSYDKSIRIFPVNHGH---SRDIYHT--KRMQHVFCVKYS 324 (433)
T ss_pred cccceeEEEeccCCCcchhc--------cccccceEEEeecCCCc---chhhhhH--hhhheeeEEEEe
Confidence 89999999999999999877 77777999999999532 1111111 112467777765
No 98
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.2e-28 Score=174.30 Aligned_cols=217 Identities=21% Similarity=0.345 Sum_probs=171.8
Q ss_pred CcccCCCCCcceEEEEECC--CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 1 MEILTGHQDNAEFALAMCP--TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.+|+||.+ ||+.++|.- .|.+||++++||.|.||.-+++
T Consensus 49 l~~L~Gh~G-PVwqv~wahPk~G~iLAScsYDgkVIiWke~~g------------------------------------- 90 (299)
T KOG1332|consen 49 LAELTGHSG-PVWKVAWAHPKFGTILASCSYDGKVIIWKEENG------------------------------------- 90 (299)
T ss_pred eeEecCCCC-CeeEEeecccccCcEeeEeecCceEEEEecCCC-------------------------------------
Confidence 457999999 999999964 7999999999999999997754
Q ss_pred CCcCcccccccccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCC-CcceEEEeeccCCceeEEEeccCC---C----
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLD---D---- 149 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~---~---- 149 (309)
..........|...|++++|.|.+ +..|++++.||.|.|.+.+.. ..........|.-.|++++|.| . +
T Consensus 91 -~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswap-a~~~g~~~~ 168 (299)
T KOG1332|consen 91 -RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAP-ASAPGSLVD 168 (299)
T ss_pred -chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecC-cCCCccccc
Confidence 222345567799999999999874 367899999999999998765 4445566778999999999998 4 2
Q ss_pred -------CeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC---CcEEEEecCCCcEEEEeCCccc
Q 021657 150 -------NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK---SSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 150 -------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
+.|++|+.|..|+||+..+.. ...-+++.+|...|+.++|.|.- +..+|++++||++.||-.+...
T Consensus 169 ~~~~~~~krlvSgGcDn~VkiW~~~~~~----w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~ 244 (299)
T KOG1332|consen 169 QGPAAKVKRLVSGGCDNLVKIWKFDSDS----WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY 244 (299)
T ss_pred cCcccccceeeccCCccceeeeecCCcc----hhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc
Confidence 569999999999999998742 45556689999999999999964 3457899999999999987522
Q ss_pred ccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 220 KKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+. +...+ +......++.+.|++.+..|.++++ |+.|.+|.-+
T Consensus 245 e~---------wk~tl---l~~f~~~~w~vSWS~sGn~LaVs~G--------dNkvtlwke~ 286 (299)
T KOG1332|consen 245 EP---------WKKTL---LEEFPDVVWRVSWSLSGNILAVSGG--------DNKVTLWKEN 286 (299)
T ss_pred Cc---------ccccc---cccCCcceEEEEEeccccEEEEecC--------CcEEEEEEeC
Confidence 21 11222 2335578999999999987775443 4799999876
No 99
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.3e-28 Score=189.74 Aligned_cols=219 Identities=19% Similarity=0.357 Sum_probs=179.4
Q ss_pred ceEEEEECCCCCE-EEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPTEPY-VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~-l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
+|.+++|+|..++ +|+.+ .-.+.||+..+ ....+.+..
T Consensus 28 ~vssl~fsp~~P~d~aVt~-S~rvqly~~~~----------------------------------------~~~~k~~sr 66 (487)
T KOG0310|consen 28 SVSSLCFSPKHPYDFAVTS-SVRVQLYSSVT----------------------------------------RSVRKTFSR 66 (487)
T ss_pred cceeEecCCCCCCceEEec-ccEEEEEecch----------------------------------------hhhhhhHHh
Confidence 6999999997665 44333 35888998763 233444556
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
....+.++.|-.|| .+|++|...|.|+|+|..+.. ....+.+|+.++..+.|+|+++..|++|+.|+.+++||+.+
T Consensus 67 Fk~~v~s~~fR~DG-~LlaaGD~sG~V~vfD~k~r~--iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~- 142 (487)
T KOG0310|consen 67 FKDVVYSVDFRSDG-RLLAAGDESGHVKVFDMKSRV--ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST- 142 (487)
T ss_pred hccceeEEEeecCC-eEEEccCCcCcEEEeccccHH--HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC-
Confidence 67889999999999 899999999999999965543 67788899999999999998888999999999999999998
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
......+.+|...|.+.+|+|...+++++|+.||.|++||++... ..+.+ ..|..+|..+
T Consensus 143 -----a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~--------------~~v~e-lnhg~pVe~v 202 (487)
T KOG0310|consen 143 -----AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT--------------SRVVE-LNHGCPVESV 202 (487)
T ss_pred -----cEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC--------------ceeEE-ecCCCceeeE
Confidence 565668899999999999999999899999999999999999832 12333 3589999999
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
.+-|.|.. +++++- +.|++||+.. .++.+..+..|...|+|+.+.
T Consensus 203 l~lpsgs~-iasAgG--------n~vkVWDl~~-----G~qll~~~~~H~KtVTcL~l~ 247 (487)
T KOG0310|consen 203 LALPSGSL-IASAGG--------NSVKVWDLTT-----GGQLLTSMFNHNKTVTCLRLA 247 (487)
T ss_pred EEcCCCCE-EEEcCC--------CeEEEEEecC-----CceehhhhhcccceEEEEEee
Confidence 99997775 444443 4899999984 466677777799999999864
No 100
>PTZ00420 coronin; Provisional
Probab=99.96 E-value=2.6e-27 Score=195.95 Aligned_cols=182 Identities=14% Similarity=0.260 Sum_probs=139.4
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc------ceEEEeeccCCceeEEEecc
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS------PVIKVEKAHDADLHCVDWNP 146 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~v~~~~~~~ 146 (309)
+.+|+.....++..+.+|.+.|.+++|+|+.+.+|++|+.||.|+|||+.++.. .....+.+|...|.+++|+|
T Consensus 56 I~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P 135 (568)
T PTZ00420 56 IRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNP 135 (568)
T ss_pred EEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECC
Confidence 344444444566778899999999999998548999999999999999976431 12345678999999999999
Q ss_pred CCCC-eEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 147 LDDN-LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 147 ~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
++. +|++++.|+.|++||+++ ++.+..+. +...|.+++|+|+|.. |++++.|+.|+|||++.
T Consensus 136 -~g~~iLaSgS~DgtIrIWDl~t------g~~~~~i~-~~~~V~SlswspdG~l-Lat~s~D~~IrIwD~Rs-------- 198 (568)
T PTZ00420 136 -MNYYIMCSSGFDSFVNIWDIEN------EKRAFQIN-MPKKLSSLKWNIKGNL-LSGTCVGKHMHIIDPRK-------- 198 (568)
T ss_pred -CCCeEEEEEeCCCeEEEEECCC------CcEEEEEe-cCCcEEEEEECCCCCE-EEEEecCCEEEEEECCC--------
Confidence 665 567899999999999998 66666665 5678999999999995 67888999999999997
Q ss_pred CCCcCCCCceeeeecCCCcceee-----EEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVD-----FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...+..+.+|.+.+.. ..|++++.+++.++.+ ...++.|+|||++.
T Consensus 199 -------g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d----~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 199 -------QEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFS----KNNMREMKLWDLKN 249 (568)
T ss_pred -------CcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcC----CCCccEEEEEECCC
Confidence 3445667788765433 2345777766644332 12345899999984
No 101
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=3e-28 Score=185.38 Aligned_cols=218 Identities=20% Similarity=0.409 Sum_probs=180.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.++++...|....++||+.|..+.++|.. ..+.+..+.||
T Consensus 221 gi~ald~~~s~~~ilTGG~d~~av~~d~~----------------------------------------s~q~l~~~~Gh 260 (506)
T KOG0289|consen 221 GITALDIIPSSSKILTGGEDKTAVLFDKP----------------------------------------SNQILATLKGH 260 (506)
T ss_pred CeeEEeecCCCCcceecCCCCceEEEecc----------------------------------------hhhhhhhccCc
Confidence 47888888887899999999999999986 45567889999
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
+..|+.+.|+|+. ..+++++.|..|+||...... .......|..+|+.+..+| ++.||++++.|+++.+.|+++
T Consensus 261 ~kki~~v~~~~~~-~~v~~aSad~~i~vws~~~~s--~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~-- 334 (506)
T KOG0289|consen 261 TKKITSVKFHKDL-DTVITASADEIIRVWSVPLSS--EPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISS-- 334 (506)
T ss_pred ceEEEEEEeccch-hheeecCCcceEEeecccccc--Cccccccccccceeeeecc-CCcEEEEecCCceEEEEEccC--
Confidence 9999999999998 789999999999999987666 5666778999999999999 999999999999999999999
Q ss_pred CCCCCCceeeecc--CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee
Q 021657 171 SNGVGSPINKFEG--HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD 248 (309)
Q Consensus 171 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 248 (309)
+..+..... ..-.+++.+|+|||- +|++|..|+.++|||+.. ...+..+.+|.++|..
T Consensus 335 ----g~~lt~vs~~~s~v~~ts~~fHpDgL-ifgtgt~d~~vkiwdlks---------------~~~~a~Fpght~~vk~ 394 (506)
T KOG0289|consen 335 ----GSQLTVVSDETSDVEYTSAAFHPDGL-IFGTGTPDGVVKIWDLKS---------------QTNVAKFPGHTGPVKA 394 (506)
T ss_pred ----CcEEEEEeeccccceeEEeeEcCCce-EEeccCCCceEEEEEcCC---------------ccccccCCCCCCceeE
Confidence 776665543 234589999999998 789999999999999998 3346678999999999
Q ss_pred EEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc-cceEEEeeeC
Q 021657 249 FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF-KAHVISCTSK 308 (309)
Q Consensus 249 ~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~ 308 (309)
++|+.+| |.++++.+| +.|++||++. .+..+++.-. ..+|.++.|.
T Consensus 395 i~FsENG-Y~Lat~add-------~~V~lwDLRK------l~n~kt~~l~~~~~v~s~~fD 441 (506)
T KOG0289|consen 395 ISFSENG-YWLATAADD-------GSVKLWDLRK------LKNFKTIQLDEKKEVNSLSFD 441 (506)
T ss_pred EEeccCc-eEEEEEecC-------CeEEEEEehh------hcccceeeccccccceeEEEc
Confidence 9999965 556655555 8999999994 4444444321 1256666654
No 102
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.2e-30 Score=207.49 Aligned_cols=191 Identities=21% Similarity=0.373 Sum_probs=167.3
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.....+..+.+|..+|.++.|++.. .+|++|+.+|+|++||++..+ .+..+.+|...+.++.|+| -+.+++.|+.|
T Consensus 58 ~kp~~i~S~~~hespIeSl~f~~~E-~LlaagsasgtiK~wDleeAk--~vrtLtgh~~~~~sv~f~P-~~~~~a~gStd 133 (825)
T KOG0267|consen 58 GKPNAITSLTGHESPIESLTFDTSE-RLLAAGSASGTIKVWDLEEAK--IVRTLTGHLLNITSVDFHP-YGEFFASGSTD 133 (825)
T ss_pred cCCchhheeeccCCcceeeecCcch-hhhcccccCCceeeeehhhhh--hhhhhhccccCcceeeecc-ceEEecccccc
Confidence 3444555688999999999999987 889999999999999999888 7889999999999999999 89999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
..+.+||++. ..+...+.+|...+..+.|+|+|++ ++.|++|..++|||+.. ......
T Consensus 134 td~~iwD~Rk------~Gc~~~~~s~~~vv~~l~lsP~Gr~-v~~g~ed~tvki~d~~a---------------gk~~~e 191 (825)
T KOG0267|consen 134 TDLKIWDIRK------KGCSHTYKSHTRVVDVLRLSPDGRW-VASGGEDNTVKIWDLTA---------------GKLSKE 191 (825)
T ss_pred ccceehhhhc------cCceeeecCCcceeEEEeecCCCce-eeccCCcceeeeecccc---------------cccccc
Confidence 9999999998 7889999999999999999999996 67999999999999987 455677
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+..|...+..+.|+|. .+|++ +||.|+++++||++ +.+.+...+.....|.+++|.|
T Consensus 192 f~~~e~~v~sle~hp~-e~Lla-------~Gs~d~tv~f~dle------tfe~I~s~~~~~~~v~~~~fn~ 248 (825)
T KOG0267|consen 192 FKSHEGKVQSLEFHPL-EVLLA-------PGSSDRTVRFWDLE------TFEVISSGKPETDGVRSLAFNP 248 (825)
T ss_pred cccccccccccccCch-hhhhc-------cCCCCceeeeeccc------eeEEeeccCCccCCceeeeecC
Confidence 8899999999999995 45666 66666999999999 5666666666678888888876
No 103
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.5e-27 Score=196.90 Aligned_cols=262 Identities=16% Similarity=0.263 Sum_probs=197.8
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC-ccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
-+|++ --+.++|.|+|++|.+++.||.|++|+............ ..............+..+..+..+.++....+..
T Consensus 10 yaht~-G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~ 88 (933)
T KOG1274|consen 10 YAHTG-GLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEE 88 (933)
T ss_pred hhccC-ceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCc
Confidence 37888 479999999999999999999999999876522211111 1111111111111444556677777887777777
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
-..+...+-++.+++|+.+| .++|.|+.|-.|++-++.... ....+.+|..+|.++.|+| ++++||+.+.||.|++
T Consensus 89 ~~iL~Rftlp~r~~~v~g~g-~~iaagsdD~~vK~~~~~D~s--~~~~lrgh~apVl~l~~~p-~~~fLAvss~dG~v~i 164 (933)
T KOG1274|consen 89 DTILARFTLPIRDLAVSGSG-KMIAAGSDDTAVKLLNLDDSS--QEKVLRGHDAPVLQLSYDP-KGNFLAVSSCDGKVQI 164 (933)
T ss_pred cceeeeeeccceEEEEecCC-cEEEeecCceeEEEEeccccc--hheeecccCCceeeeeEcC-CCCEEEEEecCceEEE
Confidence 76777778899999999998 889999999999999998877 6788899999999999999 9999999999999999
Q ss_pred EecCCCCCCCCCCceeeeccC--------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 164 FDRRNLTSNGVGSPINKFEGH--------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
||+.+ +....++.+. ...+..++|+|++..+ +..+.|+.|++|+....... .
T Consensus 165 w~~~~------~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~l-a~~~~d~~Vkvy~r~~we~~-------------f 224 (933)
T KOG1274|consen 165 WDLQD------GILSKTLTGVDKDNEFILSRICTRLAWHPKGGTL-AVPPVDNTVKVYSRKGWELQ-------------F 224 (933)
T ss_pred EEccc------chhhhhcccCCccccccccceeeeeeecCCCCeE-EeeccCCeEEEEccCCceeh-------------e
Confidence 99998 5555554321 3456789999998765 46677999999999883322 2
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
......+...+..+.|+|.|.||+ +++.||.|.|||.. +- +.......|.+++|+|
T Consensus 225 ~Lr~~~~ss~~~~~~wsPnG~YiA--------As~~~g~I~vWnv~------t~----~~~~~~~~Vc~~aw~p 280 (933)
T KOG1274|consen 225 KLRDKLSSSKFSDLQWSPNGKYIA--------ASTLDGQILVWNVD------TH----ERHEFKRAVCCEAWKP 280 (933)
T ss_pred eecccccccceEEEEEcCCCcEEe--------eeccCCcEEEEecc------cc----hhccccceeEEEecCC
Confidence 223334555699999999988766 66667999999999 31 1133457899999987
No 104
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=5.1e-28 Score=198.11 Aligned_cols=206 Identities=20% Similarity=0.321 Sum_probs=160.8
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
++.|.||.+ .|..|.||.++ +|++++.|++||+|++...
T Consensus 362 ~~ef~GHt~-DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~--------------------------------------- 400 (712)
T KOG0283|consen 362 FCEFKGHTA-DILDLSWSKNN-FLLSSSMDKTVRLWHPGRK--------------------------------------- 400 (712)
T ss_pred hhhhhccch-hheecccccCC-eeEeccccccEEeecCCCc---------------------------------------
Confidence 357899999 89999999654 8999999999999999743
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
.++.. ..|..-|+|++|+|-+.++|++|+-||.|+||++...+ +.... .-..-|++++|.| +|+..++|+.+|.
T Consensus 401 -~CL~~-F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~--Vv~W~-Dl~~lITAvcy~P-dGk~avIGt~~G~ 474 (712)
T KOG0283|consen 401 -ECLKV-FSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK--VVDWN-DLRDLITAVCYSP-DGKGAVIGTFNGY 474 (712)
T ss_pred -ceeeE-EecCCeeEEEEecccCCCcEeecccccceEEeecCcCe--eEeeh-hhhhhheeEEecc-CCceEEEEEeccE
Confidence 23333 35999999999999988999999999999999998766 44443 4458899999999 8999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeecc--------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEG--------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
+++|+.+. .+....+.. ....|+.+.|.|....-+.+.+.|..|+|||.+.
T Consensus 475 C~fY~t~~------lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~--------------- 533 (712)
T KOG0283|consen 475 CRFYDTEG------LKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRD--------------- 533 (712)
T ss_pred EEEEEccC------CeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccc---------------
Confidence 99999987 444444321 1237999999986554234677899999999976
Q ss_pred CceeeeecCCCc--ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 233 AGLFFQHAGHRD--KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 233 ~~~~~~~~~~~~--~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..++..+.|+.. .-....|+.+|.+++ +++.|..|++|++..
T Consensus 534 ~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IV--------s~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 534 KDLVHKFKGFRNTSSQISASFSSDGKHIV--------SASEDSWVYIWKNDS 577 (712)
T ss_pred hhhhhhhcccccCCcceeeeEccCCCEEE--------EeecCceEEEEeCCC
Confidence 334555555432 335678889888766 455559999999864
No 105
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=8e-28 Score=183.48 Aligned_cols=210 Identities=21% Similarity=0.399 Sum_probs=172.1
Q ss_pred CCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 5 TGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
.||++ +|..|+|+.. ...||+||.|.+|++||+. ++++
T Consensus 240 ~gHTd-avl~Ls~n~~~~nVLaSgsaD~TV~lWD~~----------------------------------------~g~p 278 (463)
T KOG0270|consen 240 SGHTD-AVLALSWNRNFRNVLASGSADKTVKLWDVD----------------------------------------TGKP 278 (463)
T ss_pred ccchH-HHHHHHhccccceeEEecCCCceEEEEEcC----------------------------------------CCCc
Confidence 57998 8999999885 4578999999999999998 4556
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
...+..|.+.|.++.|+|..+..|++|+.|++|.+.|.+.... .-..+ ...+.|-.++|.|.....++++..||+++-
T Consensus 279 ~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~-s~~~w-k~~g~VEkv~w~~~se~~f~~~tddG~v~~ 356 (463)
T KOG0270|consen 279 KSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSN-SGKEW-KFDGEVEKVAWDPHSENSFFVSTDDGTVYY 356 (463)
T ss_pred ceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccc-cCceE-EeccceEEEEecCCCceeEEEecCCceEEe
Confidence 6677789999999999999889999999999999999985331 11111 235789999999988889999999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
+|+|++ ++++.+++.|..+|.+|++++.-+.++++++.|+.|++|++...... .+....-.-
T Consensus 357 ~D~R~~-----~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~-------------~v~~~~~~~ 418 (463)
T KOG0270|consen 357 FDIRNP-----GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPK-------------SVKEHSFKL 418 (463)
T ss_pred eecCCC-----CCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCc-------------ccccccccc
Confidence 999996 69999999999999999999999999999999999999999873321 111111122
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+...+.++.|+-.++++.++.. +.++|||+..
T Consensus 419 ~rl~c~~~~~~~a~~la~GG~k-------~~~~vwd~~~ 450 (463)
T KOG0270|consen 419 GRLHCFALDPDVAFTLAFGGEK-------AVLRVWDIFT 450 (463)
T ss_pred cceeecccCCCcceEEEecCcc-------ceEEEeeccc
Confidence 3467888999999888855544 8999999983
No 106
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.1e-26 Score=169.58 Aligned_cols=248 Identities=15% Similarity=0.290 Sum_probs=184.4
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
.+|.+ -|+++.|++.|+++|||+.|++|+|||.++. ..+....
T Consensus 10 s~h~D-lihdVs~D~~GRRmAtCSsDq~vkI~d~~~~------------------------------------s~~W~~T 52 (361)
T KOG2445|consen 10 SGHKD-LIHDVSFDFYGRRMATCSSDQTVKIWDSTSD------------------------------------SGTWSCT 52 (361)
T ss_pred cCCcc-eeeeeeecccCceeeeccCCCcEEEEeccCC------------------------------------CCceEEe
Confidence 46887 9999999999999999999999999997542 1234455
Q ss_pred cccccccCCeEEEEEe-cCCCcEEEEEcCCCeEEEEEcCC-------CCcceEEEeeccCCceeEEEeccC-CCCeEEEE
Q 021657 85 GIYNGHEDTVEDVTFC-PSSAQEFCSVGDDSCLILWDARV-------GTSPVIKVEKAHDADLHCVDWNPL-DDNLILTG 155 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~ 155 (309)
...+.|.+.|..+.|. |.-++.+|+++.|+++.||.-.. .+......+......|+.++|.|. -|-.|+++
T Consensus 53 s~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~ 132 (361)
T KOG2445|consen 53 SSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAA 132 (361)
T ss_pred eeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEe
Confidence 6678899999999995 44448999999999999997521 123345667778889999999983 24589999
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeec-------cCCCCeeEEEEecCC--CcEEEEecCC-----CcEEEEeCCccccc
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFE-------GHSAAVLCVQWSPDK--SSVFGSSAED-----GLLNIWDYEKVGKK 221 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~--~~l~~~~~~d-----g~i~iwd~~~~~~~ 221 (309)
+.||.+|||+.-.+..........+++ .+..+..|+.|+|.. +.+||.|+.+ +.+.||.....+..
T Consensus 133 ~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rK 212 (361)
T KOG2445|consen 133 SADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRK 212 (361)
T ss_pred ccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcce
Confidence 999999999877653322244444444 456678899999743 3367888866 58999998774432
Q ss_pred ccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC---eEEEEecCCCCCCCCCCeEEEEEccccc--------------
Q 021657 222 VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP---WTVVSVSDDCDSTGGGGTLQIWRMSDLI-------------- 284 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~s~s~d~~s~~~dg~v~vw~~~~~~-------------- 284 (309)
...+.++.+|..+|++++|.|+-. +++|+++.| | |+||++....
T Consensus 213 -----------w~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kD-------g-v~I~~v~~~~s~i~~ee~~~~~~~ 273 (361)
T KOG2445|consen 213 -----------WLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKD-------G-VRIFKVKVARSAIEEEEVLAPDLM 273 (361)
T ss_pred -----------eeeehhcCCCCCcceeeeeccccCCceeeEEEeecC-------c-EEEEEEeeccchhhhhcccCCCCc
Confidence 234567779999999999999743 467755554 8 9999998421
Q ss_pred cCChhhHhHhhhcccceEEEeeeC
Q 021657 285 YRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 285 ~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
..-.-+.+.++..|++.|+.+.|.
T Consensus 274 ~~l~v~~vs~~~~H~~~VWrv~wN 297 (361)
T KOG2445|consen 274 TDLPVEKVSELDDHNGEVWRVRWN 297 (361)
T ss_pred cccceEEeeeccCCCCceEEEEEe
Confidence 011123456678999999999884
No 107
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.96 E-value=5.8e-28 Score=193.73 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=195.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC---ccccccCC-C--CceeecCCCCCCCCccc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP---ATAKSAGS-S--GSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~-~--~~~~~~~~~~~~~~~~~ 75 (309)
+.|.||.. -|..+++.+ +..++++|.||++++|+-........... ........ . ...-....+..+..+.+
T Consensus 8 ~~l~gH~~-DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v 85 (745)
T KOG0301|consen 8 HELEGHKS-DVRAVAVTD-GVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIV 85 (745)
T ss_pred EEeccCcc-chheeEecC-CeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEE
Confidence 57899999 688888765 44899999999999999865533321111 11111100 0 11112334566788889
Q ss_pred CCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 76 ADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
+......+...+++|...|.++....++ . +++|+.|.++++|-... ....+.+|...|+++..-| ++ .+++|
T Consensus 86 ~~~~~~~P~~~LkgH~snVC~ls~~~~~-~-~iSgSWD~TakvW~~~~----l~~~l~gH~asVWAv~~l~-e~-~~vTg 157 (745)
T KOG0301|consen 86 FKLSQAEPLYTLKGHKSNVCSLSIGEDG-T-LISGSWDSTAKVWRIGE----LVYSLQGHTASVWAVASLP-EN-TYVTG 157 (745)
T ss_pred EecCCCCchhhhhccccceeeeecCCcC-c-eEecccccceEEecchh----hhcccCCcchheeeeeecC-CC-cEEec
Confidence 9999999999999999999999987776 4 99999999999997643 3455889999999999998 55 99999
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+.|.+|++|.- ++.+++|.+|...|+.+++-+++. |++++.||.|++|++.. ..
T Consensus 158 saDKtIklWk~--------~~~l~tf~gHtD~VRgL~vl~~~~--flScsNDg~Ir~w~~~g----------------e~ 211 (745)
T KOG0301|consen 158 SADKTIKLWKG--------GTLLKTFSGHTDCVRGLAVLDDSH--FLSCSNDGSIRLWDLDG----------------EV 211 (745)
T ss_pred cCcceeeeccC--------CchhhhhccchhheeeeEEecCCC--eEeecCCceEEEEeccC----------------ce
Confidence 99999999975 457889999999999999999987 35999999999999953 57
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
+.++.+|+..|++++..++++ +++ |+|.|++++||+.. ++.+.+.-..-.||++.+
T Consensus 212 l~~~~ghtn~vYsis~~~~~~-~Iv-------s~gEDrtlriW~~~--------e~~q~I~lPttsiWsa~~ 267 (745)
T KOG0301|consen 212 LLEMHGHTNFVYSISMALSDG-LIV-------STGEDRTLRIWKKD--------ECVQVITLPTTSIWSAKV 267 (745)
T ss_pred eeeeeccceEEEEEEecCCCC-eEE-------EecCCceEEEeecC--------ceEEEEecCccceEEEEE
Confidence 788999999999999777666 455 55555999999986 455555533346777654
No 108
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.3e-28 Score=194.74 Aligned_cols=211 Identities=19% Similarity=0.341 Sum_probs=183.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
..++.|.+ -|..+...-+++.|+++|.|-+|++|+..... .
T Consensus 67 asme~HsD-WVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~--------------------------------------~ 107 (735)
T KOG0308|consen 67 ASMEHHSD-WVNDIILCGNGKTLISASSDTTVKVWNAHKDN--------------------------------------T 107 (735)
T ss_pred hhhhhhHh-HHhhHHhhcCCCceEEecCCceEEEeecccCc--------------------------------------c
Confidence 46778888 89999999999999999999999999987431 1
Q ss_pred CcccccccccCCeEEEEE-ecCCCcEEEEEcCCCeEEEEEcCCCCc--------ceEEEee-ccCCceeEEEeccCCCCe
Q 021657 82 GPRGIYNGHEDTVEDVTF-CPSSAQEFCSVGDDSCLILWDARVGTS--------PVIKVEK-AHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~-~~~~~v~~~~~~~~~~~~ 151 (309)
-+...+..|...|.|+++ .++. .++|+||-|+.|.+||++++.. .....+. ++..+|++++.++ ++..
T Consensus 108 ~c~stir~H~DYVkcla~~ak~~-~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~t~ 185 (735)
T KOG0308|consen 108 FCMSTIRTHKDYVKCLAYIAKNN-ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TGTI 185 (735)
T ss_pred hhHhhhhcccchheeeeecccCc-eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cceE
Confidence 345677889999999999 5555 8899999999999999997632 1122233 7889999999999 8999
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
+++|+..+.+++||.++ .+.+..+.+|...|..+..++||..++ +++.||+|++||+..
T Consensus 186 ivsGgtek~lr~wDprt------~~kimkLrGHTdNVr~ll~~dDGt~~l-s~sSDgtIrlWdLgq-------------- 244 (735)
T KOG0308|consen 186 IVSGGTEKDLRLWDPRT------CKKIMKLRGHTDNVRVLLVNDDGTRLL-SASSDGTIRLWDLGQ-------------- 244 (735)
T ss_pred EEecCcccceEEecccc------ccceeeeeccccceEEEEEcCCCCeEe-ecCCCceEEeeeccc--------------
Confidence 99999999999999999 889999999999999999999999865 999999999999997
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
..++.++..|...|+++..+|+-..++ +|+.||.|..=|++++
T Consensus 245 -QrCl~T~~vH~e~VWaL~~~~sf~~vY--------sG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 245 -QRCLATYIVHKEGVWALQSSPSFTHVY--------SGGRDGNIYRTDLRNP 287 (735)
T ss_pred -cceeeeEEeccCceEEEeeCCCcceEE--------ecCCCCcEEecccCCc
Confidence 678888999999999999999888877 8888899999999864
No 109
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1e-27 Score=191.12 Aligned_cols=254 Identities=19% Similarity=0.310 Sum_probs=204.0
Q ss_pred EEECCCCCEEEEecCCCcEEEEeCCccccccccC--CccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc-cc
Q 021657 15 LAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD--PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG-HE 91 (309)
Q Consensus 15 ~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 91 (309)
++|+ ..+.|+.|. ...|.+|+-.++....-.. ........-......++.+...+.+.+||..+.+.+..+.+ |.
T Consensus 183 ldWs-s~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~ 260 (484)
T KOG0305|consen 183 LDWS-SANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHA 260 (484)
T ss_pred hhcc-cCCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcC
Confidence 4666 344566654 4589999988774222111 12222222333344556677899999999999999999998 99
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..|-+++|+. ..+.+|+.|+.|..+|++..+.... .+.+|...|..+.|++ ++.++|+|+.|+.+.|||...
T Consensus 261 ~rvg~laW~~---~~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~--- 332 (484)
T KOG0305|consen 261 SRVGSLAWNS---SVLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFIWDGLS--- 332 (484)
T ss_pred ceeEEEeccC---ceEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECC-CCCeeccCCCccceEeccCCC---
Confidence 9999999983 6799999999999999998774333 5889999999999999 999999999999999999977
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEec--CCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA--EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
..++..+..|...|.+++|+|-...|||+|+ .|++|++||... +. .+.. ......|..|
T Consensus 333 ---~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~-g~--------------~i~~-vdtgsQVcsL 393 (484)
T KOG0305|consen 333 ---PEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNT-GA--------------RIDS-VDTGSQVCSL 393 (484)
T ss_pred ---ccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCC-Cc--------------Eecc-cccCCceeeE
Confidence 7889999999999999999998888999875 689999999997 22 2222 2345679999
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.|++....++.+.+ -.++.|.||++. +.+++..+.+|...|..++++|
T Consensus 394 ~Wsk~~kEi~sthG------~s~n~i~lw~~p------s~~~~~~l~gH~~RVl~la~SP 441 (484)
T KOG0305|consen 394 IWSKKYKELLSTHG------YSENQITLWKYP------SMKLVAELLGHTSRVLYLALSP 441 (484)
T ss_pred EEcCCCCEEEEecC------CCCCcEEEEecc------ccceeeeecCCcceeEEEEECC
Confidence 99999888887644 456899999999 7888999999999999999998
No 110
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.96 E-value=5.4e-27 Score=167.49 Aligned_cols=248 Identities=18% Similarity=0.258 Sum_probs=184.3
Q ss_pred ccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccc---cccCCCCceeecCCCCCCCCcccCCC
Q 021657 3 ILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATA---KSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
..+||.+ .|-.++|+| ...+|++++.|.+|++||++...+......... ....... ..+..+..+..+...+.
T Consensus 59 ~~~gh~~-svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g--~~~~~~~kdD~it~id~ 135 (313)
T KOG1407|consen 59 VYRGHTD-SVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDG--EYIAVGNKDDRITFIDA 135 (313)
T ss_pred cccCCCc-chhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCC--CEEEEecCcccEEEEEe
Confidence 4678998 677889988 567899999999999999998754443322110 0111111 12222344555666666
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
++.+.....+ ..-.+..++|+.++ .+|+.....|+|.|.....-+ .+..+++|.....|+.|+| +|++||+|+.|
T Consensus 136 r~~~~~~~~~-~~~e~ne~~w~~~n-d~Fflt~GlG~v~ILsypsLk--pv~si~AH~snCicI~f~p-~GryfA~GsAD 210 (313)
T KOG1407|consen 136 RTYKIVNEEQ-FKFEVNEISWNNSN-DLFFLTNGLGCVEILSYPSLK--PVQSIKAHPSNCICIEFDP-DGRYFATGSAD 210 (313)
T ss_pred cccceeehhc-ccceeeeeeecCCC-CEEEEecCCceEEEEeccccc--cccccccCCcceEEEEECC-CCceEeecccc
Confidence 6665554433 34567888998766 666666777999999987666 7889999999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
..+.+||+.. .-+++.+..+.-+|+.++|+.+|++ ||+|++|..|-|=++.+. ..+..
T Consensus 211 AlvSLWD~~E------LiC~R~isRldwpVRTlSFS~dg~~-lASaSEDh~IDIA~vetG---------------d~~~e 268 (313)
T KOG1407|consen 211 ALVSLWDVDE------LICERCISRLDWPVRTLSFSHDGRM-LASASEDHFIDIAEVETG---------------DRVWE 268 (313)
T ss_pred ceeeccChhH------hhhheeeccccCceEEEEeccCcce-eeccCccceEEeEecccC---------------CeEEE
Confidence 9999999998 7888899999999999999999995 789999999999888872 22333
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCC-CCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCD-STGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~-s~~~dg~v~vw~~~ 281 (309)
. .+.++...++|+|....|+.++++.-. +.-..|.+++|-+.
T Consensus 269 I-~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 269 I-PCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred e-eccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 3 367789999999987766666654300 22234788888765
No 111
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.1e-27 Score=167.23 Aligned_cols=195 Identities=19% Similarity=0.309 Sum_probs=171.2
Q ss_pred CCCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEec
Q 021657 66 PKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (309)
+...+..+++|+...+..++++.+|...|.+++.+.++ ..|++|+.|..+.+||+++++ ....+.+|...|+.++|+
T Consensus 34 tcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dn-skf~s~GgDk~v~vwDV~TGk--v~Rr~rgH~aqVNtV~fN 110 (307)
T KOG0316|consen 34 TCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDN-SKFASCGGDKAVQVWDVNTGK--VDRRFRGHLAQVNTVRFN 110 (307)
T ss_pred EcCCCceEEeecccccceeeeecCCCceeeeccccccc-cccccCCCCceEEEEEcccCe--eeeecccccceeeEEEec
Confidence 34567889999999999999999999999999999988 779999999999999999999 889999999999999999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
. +...+++|+.|..+++||.|... .+|++.+......|.++..+.. .+++|+.||+++.||++.
T Consensus 111 e-esSVv~SgsfD~s~r~wDCRS~s----~ePiQildea~D~V~Si~v~~h---eIvaGS~DGtvRtydiR~-------- 174 (307)
T KOG0316|consen 111 E-ESSVVASGSFDSSVRLWDCRSRS----FEPIQILDEAKDGVSSIDVAEH---EIVAGSVDGTVRTYDIRK-------- 174 (307)
T ss_pred C-cceEEEeccccceeEEEEcccCC----CCccchhhhhcCceeEEEeccc---EEEeeccCCcEEEEEeec--------
Confidence 9 99999999999999999999865 7889999888889999988754 467999999999999998
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceE
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHV 302 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v 302 (309)
.++.... -..+|+++.|+++++..+ .++.|+++++-|-. +++.++.+++|+..=
T Consensus 175 -------G~l~sDy--~g~pit~vs~s~d~nc~L--------a~~l~stlrLlDk~------tGklL~sYkGhkn~e 228 (307)
T KOG0316|consen 175 -------GTLSSDY--FGHPITSVSFSKDGNCSL--------ASSLDSTLRLLDKE------TGKLLKSYKGHKNME 228 (307)
T ss_pred -------ceeehhh--cCCcceeEEecCCCCEEE--------Eeeccceeeecccc------hhHHHHHhcccccce
Confidence 2233223 345899999999999877 44555999999999 899999999998643
No 112
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=5e-28 Score=178.34 Aligned_cols=240 Identities=18% Similarity=0.261 Sum_probs=193.2
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc---ccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK---SAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
|.+ +|.|++|+.|...||+|+.||.|+||.++++.+...+...... +.........+..+..+..+++....+++.
T Consensus 262 md~-aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~ 340 (508)
T KOG0275|consen 262 MDD-AVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKC 340 (508)
T ss_pred ccc-ceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchh
Confidence 566 8999999999999999999999999999999777666543222 222222233344556778889999999999
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
++.+++|..-|+...|.++| +.+++++.||+|++|+..+.+........+...+|.++-.-|.+...++++...+++++
T Consensus 341 LKEfrGHsSyvn~a~ft~dG-~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~i 419 (508)
T KOG0275|consen 341 LKEFRGHSSYVNEATFTDDG-HHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYI 419 (508)
T ss_pred HHHhcCccccccceEEcCCC-CeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEE
Confidence 99999999999999999999 88999999999999999888732222333456689999988888899999999999999
Q ss_pred EecCCCCCCCCCCceeeeccC---CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 164 FDRRNLTSNGVGSPINKFEGH---SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
.++. ++.++.+... .+...+.+.+|.|.+++ +.++|+.++.|.+.. ..+-..+.
T Consensus 420 mn~q-------GQvVrsfsSGkREgGdFi~~~lSpkGewiY-cigED~vlYCF~~~s---------------G~LE~tl~ 476 (508)
T KOG0275|consen 420 MNMQ-------GQVVRSFSSGKREGGDFINAILSPKGEWIY-CIGEDGVLYCFSVLS---------------GKLERTLP 476 (508)
T ss_pred Eecc-------ceEEeeeccCCccCCceEEEEecCCCcEEE-EEccCcEEEEEEeec---------------Cceeeeee
Confidence 9987 6788888543 34556678999999865 778899999999887 44556678
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
.|...+..++-+|.. .++++-|+| |.+++|.
T Consensus 477 VhEkdvIGl~HHPHq-NllAsYsED-------gllKLWk 507 (508)
T KOG0275|consen 477 VHEKDVIGLTHHPHQ-NLLASYSED-------GLLKLWK 507 (508)
T ss_pred cccccccccccCccc-chhhhhccc-------chhhhcC
Confidence 899999999999965 467766666 9999995
No 113
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.3e-27 Score=180.97 Aligned_cols=214 Identities=20% Similarity=0.371 Sum_probs=165.7
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEe
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFC 100 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 100 (309)
|+++|.|..|..|.|||+.-....... +..+...... .....+.-....+|+..|.++.|+
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~----------------~~LGs~~sk~---~~k~~k~~~~~~gHTdavl~Ls~n 252 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPC----------------VTLGSKASKK---KKKKGKRSNSASGHTDAVLALSWN 252 (463)
T ss_pred cceEEEeccCceeEEeccccccccccc----------------eeechhhhhh---hhhhcccccccccchHHHHHHHhc
Confidence 679999999999999998732110000 0000000000 000011112234799999999999
Q ss_pred cCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceee
Q 021657 101 PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 180 (309)
Q Consensus 101 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 180 (309)
..-.+.||+||.|.+|++||+.+++ +..++..|...|.+++|+|..+.+|++|+.|+++.+.|.|.+. ..-..
T Consensus 253 ~~~~nVLaSgsaD~TV~lWD~~~g~--p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~-----~s~~~ 325 (463)
T KOG0270|consen 253 RNFRNVLASGSADKTVKLWDVDTGK--PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPS-----NSGKE 325 (463)
T ss_pred cccceeEEecCCCceEEEEEcCCCC--cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcc-----ccCce
Confidence 8877899999999999999999999 6778888999999999999889999999999999999999632 22222
Q ss_pred eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEE
Q 021657 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 181 ~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 260 (309)
++ ..+.|..++|.|...+.+.++..||+++-+|+|..+ .+++++..|.++|.++.+++..+.+++
T Consensus 326 wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~--------------~~vwt~~AHd~~ISgl~~n~~~p~~l~ 390 (463)
T KOG0270|consen 326 WK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG--------------KPVWTLKAHDDEISGLSVNIQTPGLLS 390 (463)
T ss_pred EE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCC--------------CceeEEEeccCCcceEEecCCCCccee
Confidence 32 356899999999999888899999999999999844 467889999999999999999999998
Q ss_pred EecCCCCCCCCCCeEEEEEccc
Q 021657 261 SVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 261 s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++|.| +.|++|++..
T Consensus 391 t~s~d-------~~Vklw~~~~ 405 (463)
T KOG0270|consen 391 TASTD-------KVVKLWKFDV 405 (463)
T ss_pred ecccc-------ceEEEEeecC
Confidence 55554 9999999985
No 114
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=2.9e-27 Score=173.10 Aligned_cols=233 Identities=18% Similarity=0.329 Sum_probs=176.7
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+++|-.|.+ +|+++.|+|....|++|+.|++|++||+......
T Consensus 165 IRTlYDH~d-evn~l~FHPre~ILiS~srD~tvKlFDfsK~saK------------------------------------ 207 (430)
T KOG0640|consen 165 IRTLYDHVD-EVNDLDFHPRETILISGSRDNTVKLFDFSKTSAK------------------------------------ 207 (430)
T ss_pred EeehhhccC-cccceeecchhheEEeccCCCeEEEEecccHHHH------------------------------------
Confidence 478888999 8999999999999999999999999999753111
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce-EEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
+..+.+ ....+|.++.|+|.| .+|+.|....++++||+++.+.-. ......|.+.|+++.+++ ++++.++++.||
T Consensus 208 -rA~K~~-qd~~~vrsiSfHPsG-efllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG 283 (430)
T KOG0640|consen 208 -RAFKVF-QDTEPVRSISFHPSG-EFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDG 283 (430)
T ss_pred -HHHHHh-hccceeeeEeecCCC-ceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecC-CccEEEEeccCC
Confidence 111222 245689999999999 889999999999999999876211 112356889999999999 999999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeec-cC-CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFE-GH-SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
.|++||--. .+++.++. .| ...|.+..|..+++++| +.+.|..+++|.+.+. .++.
T Consensus 284 ~IklwDGVS------~rCv~t~~~AH~gsevcSa~Ftkn~kyiL-sSG~DS~vkLWEi~t~---------------R~l~ 341 (430)
T KOG0640|consen 284 AIKLWDGVS------NRCVRTIGNAHGGSEVCSAVFTKNGKYIL-SSGKDSTVKLWEISTG---------------RMLK 341 (430)
T ss_pred cEEeecccc------HHHHHHHHhhcCCceeeeEEEccCCeEEe-ecCCcceeeeeeecCC---------------ceEE
Confidence 999999888 88888885 34 45699999999999876 8889999999999982 2333
Q ss_pred eecCC-----CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh-hcccceEEEeeeCC
Q 021657 238 QHAGH-----RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL-EKFKAHVISCTSKP 309 (309)
Q Consensus 238 ~~~~~-----~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~P 309 (309)
.+.|- ...-+...|+.+..+++.--- ..+.+.-||.+ +...+.-+ .+|.+.+..+.-+|
T Consensus 342 ~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDE-------as~slcsWdaR------tadr~~l~slgHn~a~R~i~HSP 406 (430)
T KOG0640|consen 342 EYTGAGTTGRQKHRTQAVFNHTEDYVLFPDE-------ASNSLCSWDAR------TADRVALLSLGHNGAVRWIVHSP 406 (430)
T ss_pred EEecCCcccchhhhhhhhhcCccceEEcccc-------ccCceeecccc------chhhhhhcccCCCCCceEEEeCC
Confidence 33222 112244556666666553211 12789999998 44444333 47999999888776
No 115
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.95 E-value=1.9e-26 Score=174.53 Aligned_cols=239 Identities=17% Similarity=0.211 Sum_probs=183.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC--ccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP--ATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
.+|.|-.+ .|+++.|.+++..+++++.|+.+++|++........... ...........-..+..++.+..++.|++.
T Consensus 213 ~tLaGs~g-~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~ 291 (459)
T KOG0288|consen 213 STLAGSLG-NITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQ 291 (459)
T ss_pred hhhhccCC-CcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhh
Confidence 45666666 799999999999999999999999999998744333332 222222222222226678889999999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
...+.+.+.. ...+.+|..++ ..+++|-.|+.|++||.++.. .......+. .|+++..++ ++..+.+++.|.
T Consensus 292 k~~C~kt~l~-~S~cnDI~~~~---~~~~SgH~DkkvRfwD~Rs~~--~~~sv~~gg-~vtSl~ls~-~g~~lLsssRDd 363 (459)
T KOG0288|consen 292 KAYCSKTVLP-GSQCNDIVCSI---SDVISGHFDKKVRFWDIRSAD--KTRSVPLGG-RVTSLDLSM-DGLELLSSSRDD 363 (459)
T ss_pred hhheeccccc-cccccceEecc---eeeeecccccceEEEeccCCc--eeeEeecCc-ceeeEeecc-CCeEEeeecCCC
Confidence 9877766553 34567777663 569999999999999999888 566655554 899999999 999999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccC----CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGH----SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
++.++|+++ ......+... ....+.+.|+|++.| +|+|+.||.|+||++.+ .++
T Consensus 364 tl~viDlRt------~eI~~~~sA~g~k~asDwtrvvfSpd~~Y-vaAGS~dgsv~iW~v~t---------------gKl 421 (459)
T KOG0288|consen 364 TLKVIDLRT------KEIRQTFSAEGFKCASDWTRVVFSPDGSY-VAAGSADGSVYIWSVFT---------------GKL 421 (459)
T ss_pred ceeeeeccc------ccEEEEeeccccccccccceeEECCCCce-eeeccCCCcEEEEEccC---------------ceE
Confidence 999999999 6667666532 234789999999997 57999999999999988 223
Q ss_pred eeeecCC--CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 236 FFQHAGH--RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 236 ~~~~~~~--~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
...+... ...|++++|+|.|..++ +++.++.+.+|.
T Consensus 422 E~~l~~s~s~~aI~s~~W~~sG~~Ll--------sadk~~~v~lW~ 459 (459)
T KOG0288|consen 422 EKVLSLSTSNAAITSLSWNPSGSGLL--------SADKQKAVTLWT 459 (459)
T ss_pred EEEeccCCCCcceEEEEEcCCCchhh--------cccCCcceEecC
Confidence 3333332 23699999999998877 777779999993
No 116
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.95 E-value=3e-27 Score=183.78 Aligned_cols=214 Identities=19% Similarity=0.290 Sum_probs=162.7
Q ss_pred cccCCCCCcceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
..-+||.. .++|.+|+|+. ..++|++.||++||||+.+.........
T Consensus 262 ~nTKGHia-~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik------------------------------- 309 (641)
T KOG0772|consen 262 YNTKGHIA-ELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIK------------------------------- 309 (641)
T ss_pred hccCCcee-eeeccccccCcccceEEecCCCcEEEEecCCchhheeEEe-------------------------------
Confidence 34579999 89999999964 5799999999999999985421111000
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC-cceEEEeeccCC--ceeEEEeccCCCCeEEEEcC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDA--DLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~ 157 (309)
.....+..-+++.++|++++ .+||+|+.||.|.+|+..... .+....-.+|.. .|+|+.|++ +|++|++-+.
T Consensus 310 ---~k~~~g~Rv~~tsC~~nrdg-~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg~~LlSRg~ 384 (641)
T KOG0772|consen 310 ---TKPAGGKRVPVTSCAWNRDG-KLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DGNYLLSRGF 384 (641)
T ss_pred ---eccCCCcccCceeeecCCCc-chhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecc-ccchhhhccC
Confidence 00112344578999999999 779999999999999975443 345566678887 899999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCC--CCeeEEEEecCCCcEEEEec------CCCcEEEEeCCcccccccCCCCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHS--AAVLCVQWSPDKSSVFGSSA------EDGLLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~------~dg~i~iwd~~~~~~~~~~~~~~~ 229 (309)
|+++++||+++. .+++....+.. -+-+.++|+|+.+ |+++|+ ..|.+.+||..+
T Consensus 385 D~tLKvWDLrq~-----kkpL~~~tgL~t~~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d~~t------------ 446 (641)
T KOG0772|consen 385 DDTLKVWDLRQF-----KKPLNVRTGLPTPFPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFDRMT------------ 446 (641)
T ss_pred CCceeeeecccc-----ccchhhhcCCCccCCCCccccCCCce-EEEecccccCCCCCceEEEEeccc------------
Confidence 999999999996 55666655432 3456789999999 555775 357899999887
Q ss_pred CCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 230 NYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...++.+.-....|..+.|+|.=+.++ .|+.||.+++|==.
T Consensus 447 ---~d~v~ki~i~~aSvv~~~WhpkLNQi~--------~gsgdG~~~vyYdp 487 (641)
T KOG0772|consen 447 ---LDTVYKIDISTASVVRCLWHPKLNQIF--------AGSGDGTAHVYYDP 487 (641)
T ss_pred ---eeeEEEecCCCceEEEEeecchhhhee--------eecCCCceEEEECc
Confidence 344555566678899999999888888 45556888876443
No 117
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=1.7e-26 Score=177.06 Aligned_cols=221 Identities=17% Similarity=0.302 Sum_probs=177.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+..|.- +|.+++++|++++.++++.||+|.=|++.++.......+..... . ...
T Consensus 136 ~~~~~H~~-s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~-------------------k----~~~ 191 (479)
T KOG0299|consen 136 RVIGKHQL-SVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVL-------------------K----SHG 191 (479)
T ss_pred eeeccccC-cceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhh-------------------h----hcc
Confidence 45678988 78999999999999999999999999998764332221110000 0 001
Q ss_pred Cccccc-ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 82 GPRGIY-NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 82 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
.+...- ..|...+.+++.++++ .+|++|+.|..|.||+.++.+ .++.+.+|.+.|.+++|-. ....+++++.|+.
T Consensus 192 ~~~k~~r~~h~keil~~avS~Dg-kylatgg~d~~v~Iw~~~t~e--hv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drs 267 (479)
T KOG0299|consen 192 NPLKESRKGHVKEILTLAVSSDG-KYLATGGRDRHVQIWDCDTLE--HVKVFKGHRGAVSSLAFRK-GTSELYSASADRS 267 (479)
T ss_pred CCCCcccccccceeEEEEEcCCC-cEEEecCCCceEEEecCcccc--hhhcccccccceeeeeeec-CccceeeeecCCc
Confidence 111111 3799999999999999 899999999999999999988 6778999999999999998 8889999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|++|++.. ...+.++.+|...|.+|....-++ ++.+|+.|+++++|++... .-..+.
T Consensus 268 vkvw~~~~------~s~vetlyGHqd~v~~IdaL~reR-~vtVGgrDrT~rlwKi~ee----------------sqlifr 324 (479)
T KOG0299|consen 268 VKVWSIDQ------LSYVETLYGHQDGVLGIDALSRER-CVTVGGRDRTVRLWKIPEE----------------SQLIFR 324 (479)
T ss_pred eEEEehhH------hHHHHHHhCCccceeeechhcccc-eEEeccccceeEEEecccc----------------ceeeee
Confidence 99999999 888999999999999999888887 4667889999999999552 123457
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+|...+-+++|-.+. . ++ ||+.||.|.+|++..
T Consensus 325 g~~~sidcv~~In~~-H-fv-------sGSdnG~IaLWs~~K 357 (479)
T KOG0299|consen 325 GGEGSIDCVAFINDE-H-FV-------SGSDNGSIALWSLLK 357 (479)
T ss_pred CCCCCeeeEEEeccc-c-ee-------eccCCceEEEeeecc
Confidence 788899999998644 3 44 555559999999984
No 118
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.2e-25 Score=164.86 Aligned_cols=204 Identities=23% Similarity=0.383 Sum_probs=159.7
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
||.+.||+. .|.+|+.+|-+..+++++.|++||+||++...+
T Consensus 93 lRYF~GH~~-~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~c------------------------------------- 134 (311)
T KOG1446|consen 93 LRYFPGHKK-RVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKC------------------------------------- 134 (311)
T ss_pred EEEcCCCCc-eEEEEEecCCCCeEEecccCCeEEeeEecCCCC-------------------------------------
Confidence 578899999 999999999999999999999999999984321
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee---ccCCceeEEEeccCCCCeEEEEcC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK---AHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
...+. ...-..++|.|+| .+||++.....|++||++.-...+...+. +.....+.|.|+| +|++++.+..
T Consensus 135 ---qg~l~--~~~~pi~AfDp~G-LifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~-dGK~iLlsT~ 207 (311)
T KOG1446|consen 135 ---QGLLN--LSGRPIAAFDPEG-LIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSP-DGKSILLSTN 207 (311)
T ss_pred ---ceEEe--cCCCcceeECCCC-cEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcC-CCCEEEEEeC
Confidence 11111 1222356899999 88888888889999999976433344433 3367889999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCe---eEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAV---LCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
.+.+++.|.-. |..+.++..+...- ...+|.||+++++ +|+.||+|.+|++++ ..
T Consensus 208 ~s~~~~lDAf~------G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl-~gs~dg~i~vw~~~t---------------g~ 265 (311)
T KOG1446|consen 208 ASFIYLLDAFD------GTVKSTFSGYPNAGNLPLSATFTPDSKFVL-SGSDDGTIHVWNLET---------------GK 265 (311)
T ss_pred CCcEEEEEccC------CcEeeeEeeccCCCCcceeEEECCCCcEEE-EecCCCcEEEEEcCC---------------Cc
Confidence 99999999988 88888887654432 5678999999754 999999999999987 34
Q ss_pred eeeeecC-CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 235 LFFQHAG-HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 235 ~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+..+.+ +..++.++.|+|... ++++++ ..+.+|=..
T Consensus 266 ~v~~~~~~~~~~~~~~~fnP~~~-mf~sa~---------s~l~fw~p~ 303 (311)
T KOG1446|consen 266 KVAVLRGPNGGPVSCVRFNPRYA-MFVSAS---------SNLVFWLPD 303 (311)
T ss_pred EeeEecCCCCCCccccccCCcee-eeeecC---------ceEEEEecc
Confidence 4556666 688999999999543 454443 578899766
No 119
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.8e-27 Score=200.84 Aligned_cols=231 Identities=21% Similarity=0.394 Sum_probs=185.7
Q ss_pred eEEEEECCCCCE----EEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 12 EFALAMCPTEPY----VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 12 V~~~~~~~~~~~----l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
-+.|+|.+.+.. |+.|..||.|.+||..... .......+...
T Consensus 67 F~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~----------------------------------~~~~~~~la~~ 112 (1049)
T KOG0307|consen 67 FNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASII----------------------------------ANASEEVLATK 112 (1049)
T ss_pred ceeeeecccCCCccceeeccccCCceEEecchhhc----------------------------------cCcchHHHhhh
Confidence 467899887665 8899999999999987421 01233346677
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
..|.+.|..+.|++..+++||+|+.||.|.|||+...+.+....-....+.|.+++|+......|++++.+|.+.|||+|
T Consensus 113 ~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr 192 (1049)
T KOG0307|consen 113 SKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR 192 (1049)
T ss_pred cccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc
Confidence 88999999999999987899999999999999998866433222233567899999998777899999999999999999
Q ss_pred CCCCCCCCCceeeeccCCC--CeeEEEEecCCCcEEEEecCC---CcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 168 NLTSNGVGSPINKFEGHSA--AVLCVQWSPDKSSVFGSSAED---GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
. .+++..+..+.. .+..++|+|+...-++++++| -.|.+||+|.... ++..+.+|
T Consensus 193 ~------~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ass--------------P~k~~~~H 252 (1049)
T KOG0307|consen 193 K------KKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASS--------------PLKILEGH 252 (1049)
T ss_pred C------CCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCC--------------chhhhccc
Confidence 8 777777765544 478999999987656666655 3599999997433 34566899
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
...|.++.|++.++.+++ |+|.|+.|.+|+.+ +++.+.++....+.+..+.|.|
T Consensus 253 ~~GilslsWc~~D~~lll-------SsgkD~~ii~wN~~------tgEvl~~~p~~~nW~fdv~w~p 306 (1049)
T KOG0307|consen 253 QRGILSLSWCPQDPRLLL-------SSGKDNRIICWNPN------TGEVLGELPAQGNWCFDVQWCP 306 (1049)
T ss_pred ccceeeeccCCCCchhhh-------cccCCCCeeEecCC------CceEeeecCCCCcceeeeeecC
Confidence 999999999999977777 45555999999999 8999999988788899999986
No 120
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.95 E-value=2.4e-26 Score=176.16 Aligned_cols=217 Identities=19% Similarity=0.277 Sum_probs=174.7
Q ss_pred ccCCCCCcceEEEEECCCC--CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTE--PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~--~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
..+-|.+ .|++++|+|.. +++|+|..-|+|-+||+.+.+ ..
T Consensus 181 v~kv~~~-Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~------------------------------------~d 223 (498)
T KOG4328|consen 181 VAKVTDR-RITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE------------------------------------KD 223 (498)
T ss_pred eeEeccc-ceEEEEecccCcceEEEEccCCCcEEEEecCCCC------------------------------------Cc
Confidence 3455677 89999999965 478899999999999996211 12
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
...+..+..|..+|.++.|+|.+...+++.+.||+|++-|++......+.........+.++.|+. +...++.+..=|.
T Consensus 224 ~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~-e~~~vl~~~~~G~ 302 (498)
T KOG4328|consen 224 KDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSA-ESRSVLFGDNVGN 302 (498)
T ss_pred cCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccC-CCccEEEeecccc
Confidence 233566788999999999999988899999999999999998876444444444566788889988 6666666666679
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
..+||+|+. +.....+..|+..|++|+++|..++++|+++.|++.+|||++....... ++....
T Consensus 303 f~~iD~R~~-----~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s-----------p~lst~ 366 (498)
T KOG4328|consen 303 FNVIDLRTD-----GSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS-----------PFLSTL 366 (498)
T ss_pred eEEEEeecC-----CccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC-----------cceecc
Confidence 999999995 4446677778889999999999999999999999999999998544321 244556
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.|...|.+..|||.+..|+ |.+.|..|+|||..
T Consensus 367 ~HrrsV~sAyFSPs~gtl~--------TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 367 PHRRSVNSAYFSPSGGTLL--------TTCQDNEIRVFDSS 399 (498)
T ss_pred cccceeeeeEEcCCCCceE--------eeccCCceEEeecc
Confidence 7999999999999999866 66666899999995
No 121
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.95 E-value=8.1e-26 Score=180.00 Aligned_cols=240 Identities=20% Similarity=0.310 Sum_probs=175.4
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
....|.. +|..+.|.|-...|++++.|.++++||++.... .
T Consensus 95 ~~~aH~n-AifDl~wapge~~lVsasGDsT~r~Wdvk~s~l--------------------------------------~ 135 (720)
T KOG0321|consen 95 KPLAHKN-AIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL--------------------------------------V 135 (720)
T ss_pred ccccccc-eeEeeccCCCceeEEEccCCceeeeeeecccee--------------------------------------e
Confidence 4567998 999999999667899999999999999985321 1
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-------------------------ceEEEeeccCC
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-------------------------PVIKVEKAHDA 137 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-------------------------~~~~~~~~~~~ 137 (309)
-...+.+|.+.|.+++|.|+++..|++|+.||.|.|||++.... .......++..
T Consensus 136 G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ 215 (720)
T KOG0321|consen 136 GGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASN 215 (720)
T ss_pred cceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccC
Confidence 12347799999999999999999999999999999999864320 01111233444
Q ss_pred ceeE---EEeccCCCCeEEEEcC-CCcEEEEecCCCCCCCCCCceeeec--cC---CCCeeEEEEecCCCcEEEEecCCC
Q 021657 138 DLHC---VDWNPLDDNLILTGSA-DNSVRMFDRRNLTSNGVGSPINKFE--GH---SAAVLCVQWSPDKSSVFGSSAEDG 208 (309)
Q Consensus 138 ~v~~---~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~--~~---~~~v~~~~~~~~~~~l~~~~~~dg 208 (309)
.|.+ +.+.. +...||+++. |+.|+|||++........++..... .+ ...+.++.....|.+|+|+|. |+
T Consensus 216 ti~ssvTvv~fk-De~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt-D~ 293 (720)
T KOG0321|consen 216 TIFSSVTVVLFK-DESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT-DN 293 (720)
T ss_pred ceeeeeEEEEEe-ccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEec-CC
Confidence 4444 44455 7888888888 9999999999865443334433332 22 335777888888999987776 99
Q ss_pred cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcc--eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 209 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDK--VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 209 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
.|++|++...+. .++..+.++... -..-..+|++.+++ +|+.|...++|.+..
T Consensus 294 sIy~ynm~s~s~-------------sP~~~~sg~~~~sf~vks~lSpd~~~l~--------SgSsd~~ayiw~vs~---- 348 (720)
T KOG0321|consen 294 SIYFYNMRSLSI-------------SPVAEFSGKLNSSFYVKSELSPDDCSLL--------SGSSDEQAYIWVVSS---- 348 (720)
T ss_pred cEEEEeccccCc-------------CchhhccCcccceeeeeeecCCCCceEe--------ccCCCcceeeeeecC----
Confidence 999999987333 233334443221 12334688888877 888889999999995
Q ss_pred ChhhHhHhhhcccceEEEeeeCC
Q 021657 287 PQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 287 ~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.......+.+|.-.|+++.|.|
T Consensus 349 -~e~~~~~l~Ght~eVt~V~w~p 370 (720)
T KOG0321|consen 349 -PEAPPALLLGHTREVTTVRWLP 370 (720)
T ss_pred -ccCChhhhhCcceEEEEEeecc
Confidence 3455677889999999999987
No 122
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.4e-27 Score=192.47 Aligned_cols=190 Identities=22% Similarity=0.407 Sum_probs=170.0
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.|.+|.. +|.++.|+++..+|++|+.+|+|++||++ ..+
T Consensus 65 S~~~hes-pIeSl~f~~~E~LlaagsasgtiK~wDle----------------------------------------eAk 103 (825)
T KOG0267|consen 65 SLTGHES-PIESLTFDTSERLLAAGSASGTIKVWDLE----------------------------------------EAK 103 (825)
T ss_pred eeeccCC-cceeeecCcchhhhcccccCCceeeeehh----------------------------------------hhh
Confidence 4789999 99999999999999999999999999997 344
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.++.+.+|...+..+.|+|-+ .++++|+.|+.+++||.+... +...+.+|...+.+++|+| +|.+++.|+.|.+++
T Consensus 104 ~vrtLtgh~~~~~sv~f~P~~-~~~a~gStdtd~~iwD~Rk~G--c~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvk 179 (825)
T KOG0267|consen 104 IVRTLTGHLLNITSVDFHPYG-EFFASGSTDTDLKIWDIRKKG--CSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVK 179 (825)
T ss_pred hhhhhhccccCcceeeeccce-EEeccccccccceehhhhccC--ceeeecCCcceeEEEeecC-CCceeeccCCcceee
Confidence 567889999999999999998 888999999999999998665 6888889999999999999 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+||+.. ++.+..|..|.+.+.++.|+|..- |+++|+.|+++++||+++ .+.+......
T Consensus 180 i~d~~a------gk~~~ef~~~e~~v~sle~hp~e~-Lla~Gs~d~tv~f~dlet---------------fe~I~s~~~~ 237 (825)
T KOG0267|consen 180 IWDLTA------GKLSKEFKSHEGKVQSLEFHPLEV-LLAPGSSDRTVRFWDLET---------------FEVISSGKPE 237 (825)
T ss_pred eecccc------cccccccccccccccccccCchhh-hhccCCCCceeeeeccce---------------eEEeeccCCc
Confidence 999999 999999999999999999999776 789999999999999997 3444555555
Q ss_pred CcceeeEEEccCCCeEE
Q 021657 243 RDKVVDFHWNASDPWTV 259 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~ 259 (309)
...|.+.+|+|++..++
T Consensus 238 ~~~v~~~~fn~~~~~~~ 254 (825)
T KOG0267|consen 238 TDGVRSLAFNPDGKIVL 254 (825)
T ss_pred cCCceeeeecCCceeee
Confidence 77899999999876443
No 123
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.95 E-value=5.3e-26 Score=182.60 Aligned_cols=196 Identities=21% Similarity=0.356 Sum_probs=165.7
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+.+|+||+. .|.|++...++. |++||.|.+++||-...
T Consensus 94 ~~~LkgH~s-nVC~ls~~~~~~-~iSgSWD~TakvW~~~~---------------------------------------- 131 (745)
T KOG0301|consen 94 LYTLKGHKS-NVCSLSIGEDGT-LISGSWDSTAKVWRIGE---------------------------------------- 131 (745)
T ss_pred hhhhhcccc-ceeeeecCCcCc-eEecccccceEEecchh----------------------------------------
Confidence 357999999 789999877777 99999999999998763
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
....+.+|+..|+++..-|.+ .++||+.|.+|++|.- ++ ...++.+|.+.|+.+++-+ ...|++++.||.
T Consensus 132 --l~~~l~gH~asVWAv~~l~e~--~~vTgsaDKtIklWk~--~~--~l~tf~gHtD~VRgL~vl~--~~~flScsNDg~ 201 (745)
T KOG0301|consen 132 --LVYSLQGHTASVWAVASLPEN--TYVTGSADKTIKLWKG--GT--LLKTFSGHTDCVRGLAVLD--DSHFLSCSNDGS 201 (745)
T ss_pred --hhcccCCcchheeeeeecCCC--cEEeccCcceeeeccC--Cc--hhhhhccchhheeeeEEec--CCCeEeecCCce
Confidence 345588999999999999976 7999999999999974 45 6788999999999999987 567899999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|++|++. +..+.++.+|...+.+++...++. +++++++|++++||+... +...+.
T Consensus 202 Ir~w~~~-------ge~l~~~~ghtn~vYsis~~~~~~-~Ivs~gEDrtlriW~~~e-----------------~~q~I~ 256 (745)
T KOG0301|consen 202 IRLWDLD-------GEVLLEMHGHTNFVYSISMALSDG-LIVSTGEDRTLRIWKKDE-----------------CVQVIT 256 (745)
T ss_pred EEEEecc-------CceeeeeeccceEEEEEEecCCCC-eEEEecCCceEEEeecCc-----------------eEEEEe
Confidence 9999994 889999999999999999666666 577999999999999874 333444
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
-....|+++.+-+++. ++ +|+.||.|+||....
T Consensus 257 lPttsiWsa~~L~NgD-Iv--------vg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 257 LPTTSIWSAKVLLNGD-IV--------VGGSDGRVRVFTVDK 289 (745)
T ss_pred cCccceEEEEEeeCCC-EE--------EeccCceEEEEEecc
Confidence 4455789999988777 45 566779999999874
No 124
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=3.3e-26 Score=181.02 Aligned_cols=272 Identities=17% Similarity=0.228 Sum_probs=200.0
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc-----ccCCCCceeecCCC----------
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK-----SAGSSGSIIKQSPK---------- 67 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---------- 67 (309)
.++||++ .|.+|..+|.|.+|++|+.||+||||.+.++.+.......... .+.....+..++.+
T Consensus 395 vyrGHtg-~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~ 473 (733)
T KOG0650|consen 395 VYRGHTG-LVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIF 473 (733)
T ss_pred eEeccCC-eEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccc
Confidence 5789999 9999999999999999999999999999998554433221110 11111111111111
Q ss_pred --------------------CCCCCcccCCCCCcC----cccccccccCCeEEEEEecCCCcEEEEEcC---CCeEEEEE
Q 021657 68 --------------------PGDGNDKAADGPSVG----PRGIYNGHEDTVEDVTFCPSSAQEFCSVGD---DSCLILWD 120 (309)
Q Consensus 68 --------------------~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd 120 (309)
..+..+..|.....+ -+...-.|...|..+.|+..| .+|++... ...|.|.+
T Consensus 474 G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkG-DYlatV~~~~~~~~VliHQ 552 (733)
T KOG0650|consen 474 GDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKG-DYLATVMPDSGNKSVLIHQ 552 (733)
T ss_pred cchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCC-ceEEEeccCCCcceEEEEe
Confidence 111223344333111 123455688999999999999 78887664 35789999
Q ss_pred cCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcE
Q 021657 121 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 200 (309)
+.... ....+....+.|.++.|+| ...+|++++. ..|++||+.. ...+..+......|.+++++|.|.+|
T Consensus 553 LSK~~--sQ~PF~kskG~vq~v~FHP-s~p~lfVaTq-~~vRiYdL~k------qelvKkL~tg~kwiS~msihp~GDnl 622 (733)
T KOG0650|consen 553 LSKRK--SQSPFRKSKGLVQRVKFHP-SKPYLFVATQ-RSVRIYDLSK------QELVKKLLTGSKWISSMSIHPNGDNL 622 (733)
T ss_pred ccccc--ccCchhhcCCceeEEEecC-CCceEEEEec-cceEEEehhH------HHHHHHHhcCCeeeeeeeecCCCCeE
Confidence 98776 3455656678899999999 7777777764 5799999988 77788887778889999999999986
Q ss_pred EEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 201 FGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 201 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
+ .|+.|+.+..||+....+ +...+.-|...+++++|++.-+ |++++|+| |++.|+.-
T Consensus 623 i-~gs~d~k~~WfDldlssk--------------Pyk~lr~H~~avr~Va~H~ryP-Lfas~sdD-------gtv~Vfhg 679 (733)
T KOG0650|consen 623 I-LGSYDKKMCWFDLDLSSK--------------PYKTLRLHEKAVRSVAFHKRYP-LFASGSDD-------GTVIVFHG 679 (733)
T ss_pred E-EecCCCeeEEEEcccCcc--------------hhHHhhhhhhhhhhhhhccccc-eeeeecCC-------CcEEEEee
Confidence 5 899999999999987433 3456778999999999999766 67766666 99999984
Q ss_pred c---ccccCChhhHhHhhhcccce----EEEeeeCC
Q 021657 281 S---DLIYRPQDEVLAELEKFKAH----VISCTSKP 309 (309)
Q Consensus 281 ~---~~~~~~~~~~~~~~~~h~~~----v~~~~~~P 309 (309)
. ++.+.+.--+++.+.+|... |..+.|||
T Consensus 680 ~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP 715 (733)
T KOG0650|consen 680 MVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHP 715 (733)
T ss_pred eeehhhhcCCceEeeeeccCceeecccceEeecccC
Confidence 3 33444556678899999876 99999998
No 125
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.94 E-value=3.6e-26 Score=177.52 Aligned_cols=240 Identities=19% Similarity=0.364 Sum_probs=184.7
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
.|.. .|.++.++...+++.||+. |.|+|||+.... ...++.
T Consensus 417 ~HGE-vVcAvtIS~~trhVyTgGk-gcVKVWdis~pg-------------------------------------~k~Pvs 457 (705)
T KOG0639|consen 417 AHGE-VVCAVTISNPTRHVYTGGK-GCVKVWDISQPG-------------------------------------NKSPVS 457 (705)
T ss_pred ccCc-EEEEEEecCCcceeEecCC-CeEEEeeccCCC-------------------------------------CCCccc
Confidence 4777 8999999999999999985 899999997541 111222
Q ss_pred ccc--cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 86 IYN--GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 86 ~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
.+. .....|.++...|+| +.|++|++-.++.|||+......+...+....-..++++.+| +.+..+++..||.|.|
T Consensus 458 qLdcl~rdnyiRSckL~pdg-rtLivGGeastlsiWDLAapTprikaeltssapaCyALa~sp-DakvcFsccsdGnI~v 535 (705)
T KOG0639|consen 458 QLDCLNRDNYIRSCKLLPDG-RTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAV 535 (705)
T ss_pred cccccCcccceeeeEecCCC-ceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEE
Confidence 222 234578999999999 779999999999999998877444444444445678899999 9999999999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC-------------
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN------------- 230 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------------- 230 (309)
||+++ ...++.|++|...+.||.+++||..| .+|+-|++|+.||++...+..+......-
T Consensus 536 wDLhn------q~~VrqfqGhtDGascIdis~dGtkl-WTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWla 608 (705)
T KOG0639|consen 536 WDLHN------QTLVRQFQGHTDGASCIDISKDGTKL-WTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLA 608 (705)
T ss_pred EEccc------ceeeecccCCCCCceeEEecCCCcee-ecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCcccee
Confidence 99999 88999999999999999999999985 69999999999999986655444322210
Q ss_pred ------------CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc
Q 021657 231 ------------YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF 298 (309)
Q Consensus 231 ------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h 298 (309)
......+.+.-|..-|.++.|.+-|.+++ +.|.|+.+..|.+. -+..+.+.+.
T Consensus 609 vGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfv--------StGkDnlLnawrtP------yGasiFqskE- 673 (705)
T KOG0639|consen 609 VGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFV--------STGKDNLLNAWRTP------YGASIFQSKE- 673 (705)
T ss_pred eecccCcEEEEecCCccceeecccccEEEEEEecccCceee--------ecCchhhhhhccCc------cccceeeccc-
Confidence 01112344556788999999999999877 77777999999998 4555555542
Q ss_pred cceEEEeeeC
Q 021657 299 KAHVISCTSK 308 (309)
Q Consensus 299 ~~~v~~~~~~ 308 (309)
..+|++|..+
T Consensus 674 ~SsVlsCDIS 683 (705)
T KOG0639|consen 674 SSSVLSCDIS 683 (705)
T ss_pred cCcceeeeec
Confidence 4567666543
No 126
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=2e-25 Score=163.80 Aligned_cols=226 Identities=12% Similarity=0.215 Sum_probs=171.1
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
.|+.|++.|.+||+|..||.|.|||+.+ ...-+.+.+|..
T Consensus 27 ~~~~Fs~~G~~lAvGc~nG~vvI~D~~T----------------------------------------~~iar~lsaH~~ 66 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCANGRVVIYDFDT----------------------------------------FRIARMLSAHVR 66 (405)
T ss_pred ceEEeccCcceeeeeccCCcEEEEEccc----------------------------------------cchhhhhhcccc
Confidence 6999999999999999999999999974 334566788999
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEE------------------------------
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV------------------------------ 142 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~------------------------------ 142 (309)
+|++++|+++| +.|+|++.|..|.+||+..+.. .+.+. ..++|+..
T Consensus 67 pi~sl~WS~dg-r~LltsS~D~si~lwDl~~gs~--l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~ 142 (405)
T KOG1273|consen 67 PITSLCWSRDG-RKLLTSSRDWSIKLWDLLKGSP--LKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS 142 (405)
T ss_pred ceeEEEecCCC-CEeeeecCCceeEEEeccCCCc--eeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee
Confidence 99999999999 8899999999999999988762 11110 11222222
Q ss_pred -----------------EeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCC-CCeeEEEEecCCCcEEEEe
Q 021657 143 -----------------DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS-AAVLCVQWSPDKSSVFGSS 204 (309)
Q Consensus 143 -----------------~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~ 204 (309)
.|.+ .|+++++|...|.+.++|..+ .+++..++-.. ..|.++-++..|+++ +.-
T Consensus 143 ~Lp~d~d~dln~sas~~~fdr-~g~yIitGtsKGkllv~~a~t------~e~vas~rits~~~IK~I~~s~~g~~l-iiN 214 (405)
T KOG1273|consen 143 VLPKDDDGDLNSSASHGVFDR-RGKYIITGTSKGKLLVYDAET------LECVASFRITSVQAIKQIIVSRKGRFL-IIN 214 (405)
T ss_pred eccCCCccccccccccccccC-CCCEEEEecCcceEEEEecch------heeeeeeeechheeeeEEEEeccCcEE-EEe
Confidence 2444 688999999999999999999 88888887666 789999999999974 588
Q ss_pred cCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC--CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 205 AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG--HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 205 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.|..|+.|+++.-...-.. ....+...++. ....-.++.|+.+|.++.++.+.- ..++||.-.
T Consensus 215 tsDRvIR~ye~~di~~~~r~------~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~a-------HaLYIWE~~- 280 (405)
T KOG1273|consen 215 TSDRVIRTYEISDIDDEGRD------GEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARA-------HALYIWEKS- 280 (405)
T ss_pred cCCceEEEEehhhhcccCcc------CCcChhHHHHHHHhhhhhhheeecCCccEEEeccccc-------eeEEEEecC-
Confidence 88999999998742111000 00111111111 123457788999999888754433 899999999
Q ss_pred cccCChhhHhHhhhccc-ceEEEeeeCC
Q 021657 283 LIYRPQDEVLAELEKFK-AHVISCTSKP 309 (309)
Q Consensus 283 ~~~~~~~~~~~~~~~h~-~~v~~~~~~P 309 (309)
.+.+++.+.|.+ ....++.|||
T Consensus 281 -----~GsLVKILhG~kgE~l~DV~whp 303 (405)
T KOG1273|consen 281 -----IGSLVKILHGTKGEELLDVNWHP 303 (405)
T ss_pred -----CcceeeeecCCchhheeeccccc
Confidence 788999998888 5678888887
No 127
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.94 E-value=5.7e-25 Score=161.89 Aligned_cols=263 Identities=17% Similarity=0.327 Sum_probs=189.7
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc------CCcccc----------------ccCCCCceeecCCCCC
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT------DPATAK----------------SAGSSGSIIKQSPKPG 69 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~------~~~~~~----------------~~~~~~~~~~~~~~~~ 69 (309)
...+.|+|||..|++-+.|..+++|++......... ...... ..........+.....
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 457899999999999999999999998654211110 000000 0111122233444566
Q ss_pred CCCcccCCCCCcCccccccc--ccC---CeEEEEEecCCCcEEEEEcCCCeEEEEEc-CCCCcceEEEe-----eccCCc
Q 021657 70 DGNDKAADGPSVGPRGIYNG--HED---TVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVGTSPVIKVE-----KAHDAD 138 (309)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-----~~~~~~ 138 (309)
+.-|.+|+..+++....+.+ |.. ...+++|+||| ..|++| ....|+++|+ +.++....... .+..+-
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DG-eqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gi 209 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDG-EQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGI 209 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCC-CeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccce
Confidence 78899999998887766654 333 34589999999 556655 5678999999 44442222222 233678
Q ss_pred eeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 139 LHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 139 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
+.+++|+|.+...++.|+....+-||.-.. ..++..+.+|.+.|+.++|.++|+.++..+-.|-.|..||+|..
T Consensus 210 isc~a~sP~~~~~~a~gsY~q~~giy~~~~------~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~ 283 (406)
T KOG2919|consen 210 ISCFAFSPMDSKTLAVGSYGQRVGIYNDDG------RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYS 283 (406)
T ss_pred eeeeeccCCCCcceeeecccceeeeEecCC------CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhc
Confidence 999999997778999999999999998887 88999999999999999999999998855556889999999985
Q ss_pred cccccCCCCCcCCCCceeeeecCCCc---ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGHRD---KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL 295 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 295 (309)
+.+ ++.+..|.. .=.-....|++++|+ +|+.||.|++||++. -+..+..+
T Consensus 284 ~~p--------------v~~L~rhv~~TNQRI~FDld~~~~~La--------sG~tdG~V~vwdlk~-----~gn~~sv~ 336 (406)
T KOG2919|consen 284 RDP--------------VYALERHVGDTNQRILFDLDPKGEILA--------SGDTDGSVRVWDLKD-----LGNEVSVT 336 (406)
T ss_pred cch--------------hhhhhhhccCccceEEEecCCCCceee--------ccCCCccEEEEecCC-----CCCccccc
Confidence 554 344444433 112345568777666 777889999999995 25566777
Q ss_pred hcccceEEEeeeCC
Q 021657 296 EKFKAHVISCTSKP 309 (309)
Q Consensus 296 ~~h~~~v~~~~~~P 309 (309)
..|...|..++++|
T Consensus 337 ~~~sd~vNgvslnP 350 (406)
T KOG2919|consen 337 GNYSDTVNGVSLNP 350 (406)
T ss_pred ccccccccceecCc
Confidence 88899999999987
No 128
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.94 E-value=4.1e-25 Score=160.37 Aligned_cols=245 Identities=17% Similarity=0.234 Sum_probs=183.0
Q ss_pred CCCCcceEEEEECCCC-----CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 6 GHQDNAEFALAMCPTE-----PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~-----~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.|.- +++.+.|.|+. .+|||.+ ..+|+|.+............ +.
T Consensus 94 d~~Y-P~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~---------------------------L~- 142 (364)
T KOG0290|consen 94 DHPY-PVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSV---------------------------LN- 142 (364)
T ss_pred CCCC-CccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhh---------------------------hc-
Confidence 4666 78999999976 3466554 48999998743111111000 00
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC-cceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
...-..+..++++..|+.-+.+++.+++-|-+..|||++++. ..+...+.+|..+|..++|.....+.|++.+.||
T Consensus 143 ---~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDG 219 (364)
T KOG0290|consen 143 ---NNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADG 219 (364)
T ss_pred ---cCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCC
Confidence 001123567999999998888999999999999999999873 2245667799999999999985567999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-CcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.+|+||+|...- ...+.+-.....+...++|+++..+++|+-..| ..|.|.|+|.+ ..++..
T Consensus 220 SvRmFDLR~leH---STIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P--------------~tpva~ 282 (364)
T KOG0290|consen 220 SVRMFDLRSLEH---STIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVP--------------CTPVAR 282 (364)
T ss_pred cEEEEEeccccc---ceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCC--------------Ccceeh
Confidence 999999998432 223333333356889999999888777765554 56999999983 446778
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+.+|...|++++|.|.....++++++| ..+.+||+......+...++-... -.+.|..++|+|
T Consensus 283 L~~H~a~VNgIaWaPhS~~hictaGDD-------~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~ 345 (364)
T KOG0290|consen 283 LRNHQASVNGIAWAPHSSSHICTAGDD-------CQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSS 345 (364)
T ss_pred hhcCcccccceEecCCCCceeeecCCc-------ceEEEEecccccccCCCCchhhhh-ccceeeeeeecc
Confidence 999999999999999998888866666 899999999766544555666565 567899998875
No 129
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=3e-24 Score=164.94 Aligned_cols=229 Identities=11% Similarity=0.237 Sum_probs=183.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|+++.|+|..++|++|+.||+++||.++.. ....++.+.-.
T Consensus 215 ~I~sv~FHp~~plllvaG~d~~lrifqvDGk--------------------------------------~N~~lqS~~l~ 256 (514)
T KOG2055|consen 215 GITSVQFHPTAPLLLVAGLDGTLRIFQVDGK--------------------------------------VNPKLQSIHLE 256 (514)
T ss_pred CceEEEecCCCceEEEecCCCcEEEEEecCc--------------------------------------cChhheeeeec
Confidence 6999999999999999999999999999753 22234444445
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC-CceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD-ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
..+|.+.+|.|+|...+++++....++.||+.+.+...+....++. ..+.....+| ++++++..+..|.|.+....+
T Consensus 257 ~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT- 334 (514)
T KOG2055|consen 257 KFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKT- 334 (514)
T ss_pred cCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhhh-
Confidence 6789999999999658999999999999999988854455555544 3577888999 999999999999999999998
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC-cceee
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR-DKVVD 248 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~ 248 (309)
++.+..++ -.+.|..++|+.+++.|+ +.+.+|.|.+||++.. .++..+.... -.-++
T Consensus 335 -----~eli~s~K-ieG~v~~~~fsSdsk~l~-~~~~~GeV~v~nl~~~---------------~~~~rf~D~G~v~gts 392 (514)
T KOG2055|consen 335 -----KELITSFK-IEGVVSDFTFSSDSKELL-ASGGTGEVYVWNLRQN---------------SCLHRFVDDGSVHGTS 392 (514)
T ss_pred -----hhhhheee-eccEEeeEEEecCCcEEE-EEcCCceEEEEecCCc---------------ceEEEEeecCccceee
Confidence 88888887 467899999999999766 5556899999999983 2333333211 12366
Q ss_pred EEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 249 FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 249 ~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
++.++++.+ +| +|+..|.|.|||.++-......++++++..-...|.++.|+|
T Consensus 393 ~~~S~ng~y-lA-------~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~ 445 (514)
T KOG2055|consen 393 LCISLNGSY-LA-------TGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNH 445 (514)
T ss_pred eeecCCCce-EE-------eccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCc
Confidence 777887775 55 444559999999888777778899999999999999999986
No 130
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.93 E-value=2e-24 Score=156.71 Aligned_cols=244 Identities=20% Similarity=0.356 Sum_probs=175.3
Q ss_pred ccCCCCCcceEEEEECCCC-CEEEEecCC-------CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcc
Q 021657 3 ILTGHQDNAEFALAMCPTE-PYVLSGGKD-------KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDK 74 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~-~~l~t~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (309)
.|..|.+ .|+.++-+|.. +.|+|+..+ -.+-||.+.......
T Consensus 58 vf~h~ag-Evw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S----------------------------- 107 (370)
T KOG1007|consen 58 VFFHHAG-EVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS----------------------------- 107 (370)
T ss_pred hhhcCCc-ceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc-----------------------------
Confidence 4555666 89999999954 456665442 246788887542221
Q ss_pred cCCCCCcCcccccc-cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE----eeccCCceeEEEecc-CC
Q 021657 75 AADGPSVGPRGIYN-GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV----EKAHDADLHCVDWNP-LD 148 (309)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~-~~ 148 (309)
...+.+.+..+. .+-+.|.|+.|.|++ ..+++-. |..|.+|++.......... -..+....++-+|+| .+
T Consensus 108 --~~~tlE~v~~Ldteavg~i~cvew~Pns-~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHd 183 (370)
T KOG1007|consen 108 --NSSTLECVASLDTEAVGKINCVEWEPNS-DKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHD 183 (370)
T ss_pred --ccchhhHhhcCCHHHhCceeeEEEcCCC-CeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCc
Confidence 112334444454 455689999999988 5566544 7899999998766311111 123456778889998 46
Q ss_pred CCeEEEEcCCCcEEEEecCCCCCCCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 149 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
++.+++. .|+++..||+|++ .....+ ..|...|..+.|+|+.+++|++|++||.|+|||.|+.+
T Consensus 184 gnqv~tt-~d~tl~~~D~RT~------~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk-------- 248 (370)
T KOG1007|consen 184 GNQVATT-SDSTLQFWDLRTM------KKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK-------- 248 (370)
T ss_pred cceEEEe-CCCcEEEEEccch------hhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC--------
Confidence 6777765 6899999999984 444444 56788899999999999999999999999999999843
Q ss_pred CcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccccc--------------------C-
Q 021657 228 TTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIY--------------------R- 286 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~--------------------~- 286 (309)
.+++++.+|..+|+++.|+|.-..|++++ |.|..|.+|....-.- +
T Consensus 249 ------~pv~el~~HsHWvW~VRfn~~hdqLiLs~-------~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~ 315 (370)
T KOG1007|consen 249 ------FPVQELPGHSHWVWAVRFNPEHDQLILSG-------GSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERV 315 (370)
T ss_pred ------ccccccCCCceEEEEEEecCccceEEEec-------CCCceeEEEeccccccccccccccccccCcchhhHHhc
Confidence 35678899999999999999888888854 4558898887654310 0
Q ss_pred --ChhhHhHhhhcccceEEEeeeC
Q 021657 287 --PQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 287 --~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
-....+.++..|.+.|++++|+
T Consensus 316 kpL~dg~l~tydehEDSVY~~aWS 339 (370)
T KOG1007|consen 316 KPLQDGQLETYDEHEDSVYALAWS 339 (370)
T ss_pred ccccccccccccccccceEEEeec
Confidence 0112455788999999999997
No 131
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.93 E-value=2.9e-24 Score=155.90 Aligned_cols=226 Identities=23% Similarity=0.385 Sum_probs=173.3
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
.|.+ .|.|+.|.|++..|++-. |..|.+|+++.......... ..
T Consensus 121 eavg-~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~----------------------------------ss 164 (370)
T KOG1007|consen 121 EAVG-KINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVL----------------------------------SS 164 (370)
T ss_pred HHhC-ceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeec----------------------------------cc
Confidence 4555 789999999999998877 88999999986432111000 00
Q ss_pred ccccccCCeEEEEEecC-CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 86 IYNGHEDTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
.-.++....++-+|+|. ..+.+++ ..|+++..||+++..+ ......+|...|..+.|+|+...+|++++.||.|+||
T Consensus 165 ~s~e~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~~~-~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriW 242 (370)
T KOG1007|consen 165 ESAEMRHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTMKK-NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIW 242 (370)
T ss_pred ccccccceecccccCCCCccceEEE-eCCCcEEEEEccchhh-hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEE
Confidence 11125667788899983 2255555 4688999999998763 4455568889999999999666789999999999999
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC--------------CCCcC
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG--------------PRTTN 230 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~--------------~~~~~ 230 (309)
|.|+. ..++.++.+|...|.++.|+|....|+.+|+.|..|.+|....-....+.. ++..+
T Consensus 243 D~R~t-----k~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kp 317 (370)
T KOG1007|consen 243 DTRKT-----KFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKP 317 (370)
T ss_pred eccCC-----CccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccc
Confidence 99985 678999999999999999999888899999999999999876533111111 01111
Q ss_pred CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 231 YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
-+...+.++..|...|++++|+.-+++++|+-|.| |.+.|=++.
T Consensus 318 L~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD-------GRviIs~V~ 361 (370)
T KOG1007|consen 318 LQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD-------GRVIISSVP 361 (370)
T ss_pred ccccccccccccccceEEEeeccCCCeeEEEeccC-------ceEEeecCC
Confidence 23345667889999999999999999999999888 999988876
No 132
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-24 Score=168.73 Aligned_cols=260 Identities=17% Similarity=0.186 Sum_probs=197.1
Q ss_pred eEEEEECCCCCE-EEEecCCCcEEEEeCCccc---ccccc-CCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 12 EFALAMCPTEPY-VLSGGKDKSVVLWSIQDHI---TSSAT-DPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 12 V~~~~~~~~~~~-l~t~~~dg~i~vwd~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
|.+++|+....+ +++.+.|..+++|.-.... ..... ......+......-.....+...+.+.+|+.......+.
T Consensus 37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~ 116 (673)
T KOG4378|consen 37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRF 116 (673)
T ss_pred ceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhh
Confidence 788999876643 4456679999999866541 11111 011111222222234555566788999999998888899
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc-CCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH-DADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
+++|+..|+++.++..+ .+||+++..|.|.|..+.++. ....+... ...|.-+.|+|....+|.+++.+|.|.+||
T Consensus 117 lkdh~stvt~v~YN~~D-eyiAsvs~gGdiiih~~~t~~--~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwD 193 (673)
T KOG4378|consen 117 LKDHQSTVTYVDYNNTD-EYIASVSDGGDIIIHGTKTKQ--KTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWD 193 (673)
T ss_pred ccCCcceeEEEEecCCc-ceeEEeccCCcEEEEecccCc--cccceecCCCCeEEEeecccccceeeEeeccCCeEEEEe
Confidence 99999999999999887 889999999999999998877 34444333 345678999995556778889999999999
Q ss_pred cCCCCCCCCCCcee-eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 166 RRNLTSNGVGSPIN-KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 166 ~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
... ..++. ..+.|+.+...|+|+|..+.||++-+.|..|.+||++.... ........
T Consensus 194 v~g------~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s----------------~~~l~y~~ 251 (673)
T KOG4378|consen 194 VQG------MSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAS----------------TDRLTYSH 251 (673)
T ss_pred ccC------CCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccc----------------cceeeecC
Confidence 997 44444 44679999999999999999999999999999999986211 11122455
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+...++|.++|.+|. .|...|.|..||++. ...++..+..|...|++++|.|
T Consensus 252 Plstvaf~~~G~~L~--------aG~s~G~~i~YD~R~-----~k~Pv~v~sah~~sVt~vafq~ 303 (673)
T KOG4378|consen 252 PLSTVAFSECGTYLC--------AGNSKGELIAYDMRS-----TKAPVAVRSAHDASVTRVAFQP 303 (673)
T ss_pred CcceeeecCCceEEE--------eecCCceEEEEeccc-----CCCCceEeeecccceeEEEeee
Confidence 789999999887665 445559999999995 6788999999999999999976
No 133
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.5e-25 Score=189.37 Aligned_cols=215 Identities=18% Similarity=0.395 Sum_probs=176.0
Q ss_pred CcccCCCCCcceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
|.+++-|++ +|..+.|++.+. +||+|+.||.|.|||+.+........
T Consensus 109 la~~~~h~G-~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~------------------------------- 156 (1049)
T KOG0307|consen 109 LATKSKHTG-PVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG------------------------------- 156 (1049)
T ss_pred HhhhcccCC-ceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-------------------------------
Confidence 356788999 899999999755 99999999999999998642222111
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC--CceeEEEeccCCCCeEEEEcC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD--ADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~ 157 (309)
-....+.|.+++|+..-.++|++++.+|.+.|||++..+ .+..+..+. ..+..++|+|.....+++++.
T Consensus 157 -------~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~--pii~ls~~~~~~~~S~l~WhP~~aTql~~As~ 227 (1049)
T KOG0307|consen 157 -------SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK--PIIKLSDTPGRMHCSVLAWHPDHATQLLVASG 227 (1049)
T ss_pred -------CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC--cccccccCCCccceeeeeeCCCCceeeeeecC
Confidence 112356899999998877899999999999999999876 333443333 358899999966677888777
Q ss_pred CC---cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 158 DN---SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 158 dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
|. .|.+||+|.. ..+++.+++|...|.++.|++.+..++++++.|+.|.+|+.++ .+
T Consensus 228 dd~~PviqlWDlR~a-----ssP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t---------------gE 287 (1049)
T KOG0307|consen 228 DDSAPVIQLWDLRFA-----SSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT---------------GE 287 (1049)
T ss_pred CCCCceeEeeccccc-----CCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC---------------ce
Confidence 64 6899999985 6788899999999999999999977788999999999999998 45
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
.+..+....+++..+.|+|..+.+++.+|.| |.|.|+.+...
T Consensus 288 vl~~~p~~~nW~fdv~w~pr~P~~~A~asfd-------gkI~I~sl~~~ 329 (1049)
T KOG0307|consen 288 VLGELPAQGNWCFDVQWCPRNPSVMAAASFD-------GKISIYSLQGT 329 (1049)
T ss_pred EeeecCCCCcceeeeeecCCCcchhhhheec-------cceeeeeeecC
Confidence 6667777888999999999999899877777 99999999853
No 134
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.93 E-value=1.6e-23 Score=166.00 Aligned_cols=263 Identities=8% Similarity=0.082 Sum_probs=176.4
Q ss_pred cccCCCCCcceEEEEECCCCCEE-EEecCCCcEEEEeCCccccccccCC---ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYV-LSGGKDKSVVLWSIQDHITSSATDP---ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l-~t~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+.+|.. +.+++|+|+++.+ ++++.++.|++||..++........ ............. +.....++.+.+|+
T Consensus 25 ~~~~~~~~--~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~~~~~~~~~l~~~d 101 (300)
T TIGR03866 25 RTFPVGQR--PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKIL-YIANEDDNLVTVID 101 (300)
T ss_pred EEEECCCC--CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEE-EEEcCCCCeEEEEE
Confidence 34555544 5689999999876 5778899999999987643322111 1111111222222 22223456889999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCC-eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE-
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS-CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG- 155 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~- 155 (309)
..+.+.+..+.. ...+.+++|+|++ .+++++..++ .+.+||..+++ ...... ....+.+++|+| ++++++++
T Consensus 102 ~~~~~~~~~~~~-~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~d~~~~~--~~~~~~-~~~~~~~~~~s~-dg~~l~~~~ 175 (300)
T TIGR03866 102 IETRKVLAEIPV-GVEPEGMAVSPDG-KIVVNTSETTNMAHFIDTKTYE--IVDNVL-VDQRPRFAEFTA-DGKELWVSS 175 (300)
T ss_pred CCCCeEEeEeeC-CCCcceEEECCCC-CEEEEEecCCCeEEEEeCCCCe--EEEEEE-cCCCccEEEECC-CCCEEEEEc
Confidence 887766655542 3346889999998 6777777664 56778987765 333222 234567899999 88877544
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCC-------CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHS-------AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
..++.|++||+++ ++.+..+..+. .....++|+|++++++++.+.++.+.+||+++ .+
T Consensus 176 ~~~~~v~i~d~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~-~~-------- 240 (300)
T TIGR03866 176 EIGGTVSVIDVAT------RKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT-YE-------- 240 (300)
T ss_pred CCCCEEEEEEcCc------ceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC-Cc--------
Confidence 5689999999998 66555543211 12346889999998666666678899999976 21
Q ss_pred cCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 229 TNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
..... .+...+.+++|+|++.+++++.+.+ |.|++||+. +++++.+++. ....+.++++
T Consensus 241 ------~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~-------~~i~v~d~~------~~~~~~~~~~-~~~~~~~~~~ 299 (300)
T TIGR03866 241 ------VLDYL-LVGQRVWQLAFTPDEKYLLTTNGVS-------NDVSVIDVA------ALKVIKSIKV-GRLPWGVVVR 299 (300)
T ss_pred ------EEEEE-EeCCCcceEEECCCCCEEEEEcCCC-------CeEEEEECC------CCcEEEEEEc-ccccceeEeC
Confidence 12111 2344688999999999887544444 999999999 7888888874 4566999988
Q ss_pred C
Q 021657 309 P 309 (309)
Q Consensus 309 P 309 (309)
|
T Consensus 300 ~ 300 (300)
T TIGR03866 300 P 300 (300)
T ss_pred C
Confidence 7
No 135
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=2.9e-24 Score=165.20 Aligned_cols=206 Identities=19% Similarity=0.399 Sum_probs=163.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
..+.+|.. .|+|+.|+-||.+|+|||.||.|.+|++-...... +..+.
T Consensus 117 ~v~~aHYQ-~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~-------------------------------~~~~~ 164 (476)
T KOG0646|consen 117 NVLSAHYQ-SITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD-------------------------------NDHSV 164 (476)
T ss_pred HHHHhhcc-ceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc-------------------------------cCCCc
Confidence 46789999 89999999999999999999999999986421110 11145
Q ss_pred CcccccccccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
+++..+..|+-+|+++...+-+ ..+++|++.|.++++||+..+. ....+ ..+..+.+++.+| .+..+++|+.+|.
T Consensus 165 ~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~--LLlti-~fp~si~av~lDp-ae~~~yiGt~~G~ 240 (476)
T KOG0646|consen 165 KPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV--LLLTI-TFPSSIKAVALDP-AERVVYIGTEEGK 240 (476)
T ss_pred cceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccce--eeEEE-ecCCcceeEEEcc-cccEEEecCCcce
Confidence 6788899999999999987642 3579999999999999999887 44443 4578899999999 9999999999999
Q ss_pred EEEEecCCCCC--C--------CCCCceeeeccCCC--CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 161 VRMFDRRNLTS--N--------GVGSPINKFEGHSA--AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 161 i~i~d~~~~~~--~--------~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
|.+.++.+... . ..+..+..+.+|.+ +|+|++++-||. +|++|+.||.++|||+..
T Consensus 241 I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~Dgt-lLlSGd~dg~VcvWdi~S----------- 308 (476)
T KOG0646|consen 241 IFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGT-LLLSGDEDGKVCVWDIYS----------- 308 (476)
T ss_pred EEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCcc-EEEeeCCCCCEEEEecch-----------
Confidence 99988876431 1 11344566778877 999999999999 577999999999999988
Q ss_pred cCCCCceeeeecCCCcceeeEEEccCCCeEE
Q 021657 229 TNYPAGLFFQHAGHRDKVVDFHWNASDPWTV 259 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 259 (309)
.+++.++....++|+.+.+.|-.+..+
T Consensus 309 ----~Q~iRtl~~~kgpVtnL~i~~~~~~~~ 335 (476)
T KOG0646|consen 309 ----KQCIRTLQTSKGPVTNLQINPLERGII 335 (476)
T ss_pred ----HHHHHHHhhhccccceeEeecccccee
Confidence 455556555677899888876544333
No 136
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=8.4e-24 Score=154.68 Aligned_cols=236 Identities=19% Similarity=0.378 Sum_probs=166.9
Q ss_pred cCCCCCcceEEEEECC--CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 4 LTGHQDNAEFALAMCP--TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+.|.+ .|..+.|.+ -|+.+|+++.|++++||.=........ ....
T Consensus 55 Wrah~~-Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~-------------------------------~~~W 102 (361)
T KOG2445|consen 55 WRAHDG-SIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAH-------------------------------GRRW 102 (361)
T ss_pred EEecCC-cEEEEEecCccccceEEEEecCCceeeeeecccccccc-------------------------------ccee
Confidence 467888 789999965 589999999999999998532100000 0122
Q ss_pred CcccccccccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCC----cceEEEe-------eccCCceeEEEeccC--
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGT----SPVIKVE-------KAHDADLHCVDWNPL-- 147 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~-------~~~~~~v~~~~~~~~-- 147 (309)
.....+......|++++|.|.. +..+++++.||.++||+.-... ......+ ..+..+..|+.|+|.
T Consensus 103 v~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~ 182 (361)
T KOG2445|consen 103 VRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRM 182 (361)
T ss_pred EEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccc
Confidence 2345566677899999999863 2679999999999999875432 1112222 245667889999872
Q ss_pred CCCeEEEEcCC-----CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC---CcEEEEecCCCcEEEEeCCccc
Q 021657 148 DDNLILTGSAD-----NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK---SSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 148 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
...+|++|+.+ +.+.||....... ....+.++.+|..+|+.|+|.|+- -+++|+++.|| |+||.++...
T Consensus 183 ~~p~iAvgs~e~a~~~~~~~Iye~~e~~r--Kw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~ 259 (361)
T KOG2445|consen 183 HEPLIAVGSDEDAPHLNKVKIYEYNENGR--KWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVAR 259 (361)
T ss_pred cCceEEEEcccCCccccceEEEEecCCcc--eeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeecc
Confidence 23578888766 4788887654210 045667778999999999999963 34789999999 9999998644
Q ss_pred ccccCCC-----CCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 220 KKVEQGP-----RTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 220 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
....+.+ .....+.+.+..+..|+..|..+.|+-.|..|. |.|.||+|++|....
T Consensus 260 s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLs--------StGdDG~VRLWkany 319 (361)
T KOG2445|consen 260 SAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILS--------STGDDGCVRLWKANY 319 (361)
T ss_pred chhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEe--------ecCCCceeeehhhhh
Confidence 3332222 112244566778899999999999999877544 566669999999764
No 137
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.92 E-value=1.8e-23 Score=157.86 Aligned_cols=215 Identities=18% Similarity=0.393 Sum_probs=170.4
Q ss_pred ccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+.||++ +|..++|+| +...+|+||.|.+|.||++..+-.... -.
T Consensus 76 ~v~GHt~-~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~---------------------------------lt 121 (472)
T KOG0303|consen 76 LVCGHTA-PVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRD---------------------------------LT 121 (472)
T ss_pred CccCccc-cccccccCccCCceeecCCCCceEEEEECCCcccccC---------------------------------cc
Confidence 4679999 899999999 567799999999999999975422111 12
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+++..+.+|+..|--++|+|.-.+.|++++.|.+|.+||+.+++ ....+. |...|+++.|+. +|.+|++.+.|..|
T Consensus 122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tge--ali~l~-hpd~i~S~sfn~-dGs~l~TtckDKkv 197 (472)
T KOG0303|consen 122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGE--ALITLD-HPDMVYSMSFNR-DGSLLCTTCKDKKV 197 (472)
T ss_pred cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCc--eeeecC-CCCeEEEEEecc-CCceeeeeccccee
Confidence 56788999999999999999988999999999999999999998 455554 999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCC-eeEEEEecCCCcEEEEec---CCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAA-VLCVQWSPDKSSVFGSSA---EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
||||.++ ++.+..-.+|.+. -..+-|-.++. ++.+|- .+.++-+||-.+..++. .+.
T Consensus 198 Rv~dpr~------~~~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~------------~~~ 258 (472)
T KOG0303|consen 198 RVIDPRR------GTVVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPI------------ALQ 258 (472)
T ss_pred EEEcCCC------CcEeeecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccccCcc------------eeE
Confidence 9999999 8888888777653 44566888887 565553 46889999988744432 233
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++. .++.|.---|.|+...+.+ .|-.|+.|+.|.+.+
T Consensus 259 elD-tSnGvl~PFyD~dt~ivYl-------~GKGD~~IRYyEit~ 295 (472)
T KOG0303|consen 259 ELD-TSNGVLLPFYDPDTSIVYL-------CGKGDSSIRYFEITN 295 (472)
T ss_pred Eec-cCCceEEeeecCCCCEEEE-------EecCCcceEEEEecC
Confidence 333 3445555567887777776 444569999999875
No 138
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.92 E-value=6.7e-24 Score=171.69 Aligned_cols=185 Identities=16% Similarity=0.249 Sum_probs=147.1
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC--CCCeEEEEcCCCcEEEEecC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL--DDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~ 167 (309)
..-.+.+++.+|+| ++||+|..-|.+++|++..-+ ....+.+|...|.|+.|+.. ..++|++++.|.-|++||..
T Consensus 458 ~r~G~R~~~vSp~g-qhLAsGDr~GnlrVy~Lq~l~--~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~ 534 (1080)
T KOG1408|consen 458 SRFGFRALAVSPDG-QHLASGDRGGNLRVYDLQELE--YTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVK 534 (1080)
T ss_pred cccceEEEEECCCc-ceecccCccCceEEEEehhhh--hhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecc
Confidence 34568999999999 889999999999999998777 67788899999999999751 24689999999999999987
Q ss_pred CCCCCCCCCceeeeccCCCCeeEE-------------------------------------------------EEecCCC
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCV-------------------------------------------------QWSPDKS 198 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~-------------------------------------------------~~~~~~~ 198 (309)
.. ..+++++.+|...|+++ +..|..+
T Consensus 535 rn-----y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k 609 (1080)
T KOG1408|consen 535 RN-----YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSK 609 (1080)
T ss_pred cc-----cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcc
Confidence 53 44555555555555554 4444445
Q ss_pred cEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEE
Q 021657 199 SVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIW 278 (309)
Q Consensus 199 ~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw 278 (309)
+ +++++.|..|+|||+...++. +.+....+|.+....+...|.+-|++.++ .|.++.++
T Consensus 610 ~-v~t~cQDrnirif~i~sgKq~------------k~FKgs~~~eG~lIKv~lDPSgiY~atSc--------sdktl~~~ 668 (1080)
T KOG1408|consen 610 L-VVTVCQDRNIRIFDIESGKQV------------KSFKGSRDHEGDLIKVILDPSGIYLATSC--------SDKTLCFV 668 (1080)
T ss_pred e-EEEEecccceEEEecccccee------------eeecccccCCCceEEEEECCCccEEEEee--------cCCceEEE
Confidence 4 568889999999999883322 23444456778889999999999888444 45799999
Q ss_pred EccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 279 RMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|+. +++++.++.+|...|+.+.|.|
T Consensus 669 Df~------sgEcvA~m~GHsE~VTG~kF~n 693 (1080)
T KOG1408|consen 669 DFV------SGECVAQMTGHSEAVTGVKFLN 693 (1080)
T ss_pred Eec------cchhhhhhcCcchheeeeeecc
Confidence 999 8999999999999999999975
No 139
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.92 E-value=1.4e-23 Score=168.85 Aligned_cols=272 Identities=21% Similarity=0.315 Sum_probs=193.7
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccc----cccccCCcc--c-----cccCCCCceeecCCCCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI----TSSATDPAT--A-----KSAGSSGSIIKQSPKPGDG 71 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~----~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~ 71 (309)
.|.||++ -|+++.|+|.+..|++++.|.++.+|...+.. ......... . .....+. ..+......+
T Consensus 262 ll~GHeD-WV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~--~~ii~~g~~G 338 (764)
T KOG1063|consen 262 LLMGHED-WVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNS--NVIIAHGRTG 338 (764)
T ss_pred hhcCccc-ceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCC--CEEEEecccC
Confidence 4569999 89999999999999999999999999987641 111111100 0 0000011 1122223345
Q ss_pred CcccCCCC---CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC------------------------
Q 021657 72 NDKAADGP---SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG------------------------ 124 (309)
Q Consensus 72 ~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~------------------------ 124 (309)
...+|... .......+.+|.+.|.++.|.|.| .+|++.+.|-+-|++-.-..
T Consensus 339 g~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psG-eflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn 417 (764)
T KOG1063|consen 339 GFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSG-EFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVN 417 (764)
T ss_pred cEEEEeccCccceeeccccccccccceeeeecCCC-CEEEEeccccceeeecccccccceeeecccccccccceeeehcc
Confidence 56666521 223445567899999999999988 67888888877777643200
Q ss_pred --------------------------------------------------------------------------------
Q 021657 125 -------------------------------------------------------------------------------- 124 (309)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (309)
T Consensus 418 ~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p 497 (764)
T KOG1063|consen 418 EDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAP 497 (764)
T ss_pred CCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCc
Confidence
Q ss_pred ----------------CcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC-----cEEEEecCCCCCCCCCCceeeecc
Q 021657 125 ----------------TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN-----SVRMFDRRNLTSNGVGSPINKFEG 183 (309)
Q Consensus 125 ----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~ 183 (309)
-.|.++.+.+|...|++++.+| +++++|++.... .|++|+..+ ...+..+.+
T Consensus 498 ~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~------W~~~~~L~~ 570 (764)
T KOG1063|consen 498 CELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISP-TGNLIASACKSSLKEHAVIRLWNTAN------WLQVQELEG 570 (764)
T ss_pred hhccCCChHHHHHHhccchhhHHhccCceeEEEEEecC-CCCEEeehhhhCCccceEEEEEeccc------hhhhheecc
Confidence 0012233568889999999999 999999998653 599999998 888889999
Q ss_pred CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEec
Q 021657 184 HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 184 ~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 263 (309)
|.-.|+.|+|+|||++|+ +.+.|.++.+|.......... .+.....|+.-|.++.|+|++.+ ++++|
T Consensus 571 HsLTVT~l~FSpdg~~LL-svsRDRt~sl~~~~~~~~~e~-----------~fa~~k~HtRIIWdcsW~pde~~-FaTaS 637 (764)
T KOG1063|consen 571 HSLTVTRLAFSPDGRYLL-SVSRDRTVSLYEVQEDIKDEF-----------RFACLKAHTRIIWDCSWSPDEKY-FATAS 637 (764)
T ss_pred cceEEEEEEECCCCcEEE-EeecCceEEeeeeecccchhh-----------hhccccccceEEEEcccCcccce-eEEec
Confidence 999999999999999865 899999999999865322211 12236789999999999998776 66666
Q ss_pred CCCCCCCCCCeEEEEEccccccCChhhHhH--hhhcccceEEEeeeCC
Q 021657 264 DDCDSTGGGGTLQIWRMSDLIYRPQDEVLA--ELEKFKAHVISCTSKP 309 (309)
Q Consensus 264 ~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~P 309 (309)
+| .+|++|...+.. .+.+. ....+...|+.+++.|
T Consensus 638 RD-------K~VkVW~~~~~~----d~~i~~~a~~~~~~aVTAv~~~~ 674 (764)
T KOG1063|consen 638 RD-------KKVKVWEEPDLR----DKYISRFACLKFSLAVTAVAYLP 674 (764)
T ss_pred CC-------ceEEEEeccCch----hhhhhhhchhccCCceeeEEeec
Confidence 66 999999998531 13333 2346888999999876
No 140
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.92 E-value=4.6e-24 Score=165.95 Aligned_cols=236 Identities=17% Similarity=0.274 Sum_probs=187.4
Q ss_pred CcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcc----ccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 9 DNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT----AKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 9 ~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
++.|.++.+.|||+.|++|++-.++.|||+............. ..................++++.+||+.+...+
T Consensus 465 dnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V 544 (705)
T KOG0639|consen 465 DNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV 544 (705)
T ss_pred ccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee
Confidence 3478999999999999999999999999998763322221111 111122222333444567899999999999999
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
+.|++|+..+.||..+++| ..|-||+-|.+|+-||++++++.... ...+.|.++.++| ++.++++|-.++.+.+.
T Consensus 545 rqfqGhtDGascIdis~dG-tklWTGGlDntvRcWDlregrqlqqh---dF~SQIfSLg~cP-~~dWlavGMens~vevl 619 (705)
T KOG0639|consen 545 RQFQGHTDGASCIDISKDG-TKLWTGGLDNTVRCWDLREGRQLQQH---DFSSQIFSLGYCP-TGDWLAVGMENSNVEVL 619 (705)
T ss_pred ecccCCCCCceeEEecCCC-ceeecCCCccceeehhhhhhhhhhhh---hhhhhheecccCC-CccceeeecccCcEEEE
Confidence 9999999999999999999 88999999999999999998843333 3457899999999 99999999999999998
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
.... .....+.-|.+-|.++.|.+.|++ +++.+.|+.+..|.+.- ...++... ...
T Consensus 620 h~sk-------p~kyqlhlheScVLSlKFa~cGkw-fvStGkDnlLnawrtPy---------------GasiFqsk-E~S 675 (705)
T KOG0639|consen 620 HTSK-------PEKYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPY---------------GASIFQSK-ESS 675 (705)
T ss_pred ecCC-------ccceeecccccEEEEEEecccCce-eeecCchhhhhhccCcc---------------ccceeecc-ccC
Confidence 8764 445667778999999999999997 67999999999999876 33444443 456
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.|.++..+-++.+++ ||+.|....||.+.
T Consensus 676 sVlsCDIS~ddkyIV--------TGSGdkkATVYeV~ 704 (705)
T KOG0639|consen 676 SVLSCDISFDDKYIV--------TGSGDKKATVYEVI 704 (705)
T ss_pred cceeeeeccCceEEE--------ecCCCcceEEEEEe
Confidence 899999999877666 77777999998763
No 141
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=5.7e-23 Score=164.91 Aligned_cols=260 Identities=14% Similarity=0.185 Sum_probs=194.5
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecC------CCCCCCCcccCCCCCcCc
Q 021657 10 NAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQS------PKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 10 ~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 83 (309)
++|.++||+.+.+.||.+-.||.|.||++...-........ ..+......+++ .....+.+..||+.+.++
T Consensus 26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g---~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~ 102 (691)
T KOG2048|consen 26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHG---PEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQ 102 (691)
T ss_pred cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEec---CCCCceeeEEEccCCeEEeecCCceEEEEecccCce
Confidence 37999999999999999999999999999875221111110 111112222222 224568899999999999
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
...+....+.|++++.+|.+ ..++.|++||.+..++...++......+...++.|.++.|+| ++..+++|+.||.|++
T Consensus 103 ~~~~d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~-~~~~i~~Gs~Dg~Iri 180 (691)
T KOG2048|consen 103 KYNIDSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNP-TGTKIAGGSIDGVIRI 180 (691)
T ss_pred eEEecCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecC-CccEEEecccCceEEE
Confidence 99999999999999999998 789999999988888887776444455556678999999999 9999999999999999
Q ss_pred EecCCCCCCCCCCceeee-------cc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 164 FDRRNLTSNGVGSPINKF-------EG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~-------~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
||... +..+... .. ...-|.++.|-.++. +++|..-|+|.+||-.. ..+
T Consensus 181 wd~~~------~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t--I~sgDS~G~V~FWd~~~---------------gTL 237 (691)
T KOG2048|consen 181 WDVKS------GQTLHIITMQLDRLSKREPTIVWSVLFLRDST--IASGDSAGTVTFWDSIF---------------GTL 237 (691)
T ss_pred EEcCC------CceEEEeeecccccccCCceEEEEEEEeecCc--EEEecCCceEEEEcccC---------------cch
Confidence 99998 4444411 11 233467888887775 67999999999999987 556
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
+..+..|...|.+++-.+++.+++ ++|.|+.|..|........ -........|...|.+++.
T Consensus 238 iqS~~~h~adVl~Lav~~~~d~vf--------saGvd~~ii~~~~~~~~~~--wv~~~~r~~h~hdvrs~av 299 (691)
T KOG2048|consen 238 IQSHSCHDADVLALAVADNEDRVF--------SAGVDPKIIQYSLTTNKSE--WVINSRRDLHAHDVRSMAV 299 (691)
T ss_pred hhhhhhhhcceeEEEEcCCCCeEE--------EccCCCceEEEEecCCccc--eeeeccccCCcccceeeee
Confidence 777889999999999999989888 7888899999998742100 0011223455556666553
No 142
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.92 E-value=3.7e-23 Score=150.32 Aligned_cols=205 Identities=22% Similarity=0.353 Sum_probs=161.9
Q ss_pred CCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 8 QDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 8 ~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
...++++..|+. +.+++.++|-|-+..|||++++. .+.....
T Consensus 149 ~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~-------------------------------------~~~vkTQ 191 (364)
T KOG0290|consen 149 FCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGV-------------------------------------SGTVKTQ 191 (364)
T ss_pred cCCcccccccccCCcceeEeecccCeEEEEEEeecc-------------------------------------ccceeeE
Confidence 334899999987 67889999999999999998641 1112345
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc-CCceeEEEeccCCCCeEEEEcCC-CcEEEE
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH-DADLHCVDWNPLDDNLILTGSAD-NSVRMF 164 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~ 164 (309)
+-.|..+|.+++|...+...||+.+.||.++++|++.-+...+...... ..+...++|++++.+++|+-..| ..|.+.
T Consensus 192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iL 271 (364)
T KOG0290|consen 192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVIL 271 (364)
T ss_pred EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEE
Confidence 6789999999999998888999999999999999998764333333333 56889999999888999987765 579999
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
|+|.+ ..++.++.+|.+.|+.|+|.|.....++++++|..+.+||+........ ..++..+. -.+
T Consensus 272 DiR~P-----~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~---------~dPilay~-a~~ 336 (364)
T KOG0290|consen 272 DIRVP-----CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENG---------EDPILAYT-AGG 336 (364)
T ss_pred EecCC-----CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCC---------CCchhhhh-ccc
Confidence 99997 7899999999999999999999888899999999999999987444111 11222233 456
Q ss_pred ceeeEEEccCCCeEEEEecC
Q 021657 245 KVVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~ 264 (309)
.|+.+.|++..+-.++.+..
T Consensus 337 EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 337 EVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred eeeeeeecccCCCEEEEEec
Confidence 89999999876666655544
No 143
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.92 E-value=1.6e-23 Score=169.55 Aligned_cols=240 Identities=18% Similarity=0.273 Sum_probs=185.7
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccc--c---ccCCCCceeecCCCCCCCCcccCCCC-CcCccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATA--K---SAGSSGSIIKQSPKPGDGNDKAADGP-SVGPRG 85 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 85 (309)
+.+++++|+|++||+|..-|.+|||++.+............ . ..........++.+..+..+.++|.. +..+++
T Consensus 462 ~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~q 541 (1080)
T KOG1408|consen 462 FRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQ 541 (1080)
T ss_pred eEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhh
Confidence 89999999999999999999999999987644333222111 1 11122234556666777888888865 467788
Q ss_pred ccccccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCC---CCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 86 IYNGHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARV---GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
++.+|...|+++.|...| ...+++++.|..|..--.+. +..-........+..++.|+..| +..++++++.|..|
T Consensus 542 tld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp-~~k~v~t~cQDrni 620 (1080)
T KOG1408|consen 542 TLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDP-TSKLVVTVCQDRNI 620 (1080)
T ss_pred hhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCC-CcceEEEEecccce
Confidence 999999999999998765 35688999998776533221 11111111122345789999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeecc---CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 162 RMFDRRNLTSNGVGSPINKFEG---HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+|||+.+ ++..+.|++ |.+..-.+...|.|-| +|+.+.|.++.++|+-. .+++..
T Consensus 621 rif~i~s------gKq~k~FKgs~~~eG~lIKv~lDPSgiY-~atScsdktl~~~Df~s---------------gEcvA~ 678 (1080)
T KOG1408|consen 621 RIFDIES------GKQVKSFKGSRDHEGDLIKVILDPSGIY-LATSCSDKTLCFVDFVS---------------GECVAQ 678 (1080)
T ss_pred EEEeccc------cceeeeecccccCCCceEEEEECCCccE-EEEeecCCceEEEEecc---------------chhhhh
Confidence 9999999 888888875 5567778999999997 57888899999999988 567788
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.||...|+.+.|.+|-..|+ +.+.||.|.||.+..
T Consensus 679 m~GHsE~VTG~kF~nDCkHlI--------SvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 679 MTGHSEAVTGVKFLNDCKHLI--------SVSGDGCIFVWKLPL 714 (1080)
T ss_pred hcCcchheeeeeecccchhhe--------eecCCceEEEEECch
Confidence 899999999999999988877 666779999999974
No 144
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=5e-23 Score=150.27 Aligned_cols=238 Identities=15% Similarity=0.166 Sum_probs=181.4
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccc---cccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITS---SATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
....|.+ +|.+++|+.||..+++|+.|+.+++||+.++... .+..+.............++.+++-+..+++||.+
T Consensus 67 a~~~~~~-PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R 145 (347)
T KOG0647|consen 67 AQQSHDG-PVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR 145 (347)
T ss_pred hhhccCC-CeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccC
Confidence 3456888 9999999999999999999999999999987322 22333333444444446778888999999999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
...++..+.- .+++.++..-. .+++.+..+..|.+|+++.+..........-+-.++|++..+ +....+.|+-+|
T Consensus 146 ~~~pv~t~~L-PeRvYa~Dv~~---pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~-d~~~~alGsiEG 220 (347)
T KOG0647|consen 146 SSNPVATLQL-PERVYAADVLY---PMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQ-DKDGFALGSIEG 220 (347)
T ss_pred CCCeeeeeec-cceeeehhccC---ceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEe-cCCceEeeeecc
Confidence 9888877663 45677666533 467888889999999997765333333333455789999998 788889999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCC---------CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHS---------AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 230 (309)
.+-+..+..+. .+.-..|+.|. -.|++|+|+|.... |++++.||++.+||-..
T Consensus 221 rv~iq~id~~~----~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgt-lvTaGsDGtf~FWDkda------------- 282 (347)
T KOG0647|consen 221 RVAIQYIDDPN----PKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGT-LVTAGSDGTFSFWDKDA------------- 282 (347)
T ss_pred eEEEEecCCCC----ccCceeEEEeccCCCCCCceEEecceEeecccce-EEEecCCceEEEecchh-------------
Confidence 99999888732 13334455554 25789999998775 67999999999999876
Q ss_pred CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCC
Q 021657 231 YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDC 266 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~ 266 (309)
...+.....|..+|++..|+.+|..++.+.+.|.
T Consensus 283 --r~kLk~s~~~~qpItcc~fn~~G~ifaYA~gYDW 316 (347)
T KOG0647|consen 283 --RTKLKTSETHPQPITCCSFNRNGSIFAYALGYDW 316 (347)
T ss_pred --hhhhhccCcCCCccceeEecCCCCEEEEEeeccc
Confidence 3345566789999999999999999888888884
No 145
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=5.8e-24 Score=167.24 Aligned_cols=232 Identities=21% Similarity=0.345 Sum_probs=179.7
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
+|+.|.+ .|+.++|+|....|++++.||+|++|+++..... .....+
T Consensus 289 tl~s~~d-~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s--------------------------------~~~~~e 335 (577)
T KOG0642|consen 289 TLRSHDD-CIRALAFHPSEPVLITASEDGTLKLWNLQKAKKS--------------------------------AEKDVE 335 (577)
T ss_pred eeecchh-hhhhhhcCCCCCeEEEeccccchhhhhhcccCCc--------------------------------ccccee
Confidence 5677888 8999999999999999999999999999541110 112456
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC--------cceEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT--------SPVIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
++..+.+|.++|.|+++.+++ ..+++|+.||+|+.|++.... ......+.+|.+.++.+++++ ....|++
T Consensus 336 pi~tfraH~gPVl~v~v~~n~-~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~-~~~~Lls 413 (577)
T KOG0642|consen 336 PILTFRAHEGPVLCVVVPSNG-EHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSS-TKDRLLS 413 (577)
T ss_pred eeEEEecccCceEEEEecCCc-eEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecc-cccceee
Confidence 788999999999999999988 889999999999999764211 123456789999999999999 8889999
Q ss_pred EcCCCcEEEEecCCCCC--CCC------------------------------------CCceeeec-------cCCCCee
Q 021657 155 GSADNSVRMFDRRNLTS--NGV------------------------------------GSPINKFE-------GHSAAVL 189 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~--~~~------------------------------------~~~~~~~~-------~~~~~v~ 189 (309)
++.||++|.|+...... .+. ...+..+. .....++
T Consensus 414 cs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in 493 (577)
T KOG0642|consen 414 CSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQIN 493 (577)
T ss_pred ecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccc
Confidence 99999999999765322 000 00000000 0113466
Q ss_pred EEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCC
Q 021657 190 CVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDST 269 (309)
Q Consensus 190 ~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~ 269 (309)
.+.++|.+.. ..++..|+.|+++|... ..++.....|...++++++.|++.+++ +|
T Consensus 494 ~vVs~~~~~~-~~~~hed~~Ir~~dn~~---------------~~~l~s~~a~~~svtslai~~ng~~l~--------s~ 549 (577)
T KOG0642|consen 494 KVVSHPTADI-TFTAHEDRSIRFFDNKT---------------GKILHSMVAHKDSVTSLAIDPNGPYLM--------SG 549 (577)
T ss_pred eEEecCCCCe-eEecccCCceecccccc---------------cccchheeeccceecceeecCCCceEE--------ee
Confidence 7888888885 45999999999999988 556778889999999999999999877 77
Q ss_pred CCCCeEEEEEccccccCChhhHhHhhhccc
Q 021657 270 GGGGTLQIWRMSDLIYRPQDEVLAELEKFK 299 (309)
Q Consensus 270 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~ 299 (309)
+.|+.+++|.+. ...++.+...|+
T Consensus 550 s~d~sv~l~kld------~k~~~~es~~~r 573 (577)
T KOG0642|consen 550 SHDGSVRLWKLD------VKTCVLESTAHR 573 (577)
T ss_pred cCCceeehhhcc------chheeecccccc
Confidence 777999999998 456666666554
No 146
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=6.8e-23 Score=150.42 Aligned_cols=191 Identities=16% Similarity=0.246 Sum_probs=147.5
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCC--eEEEEcCCC
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN--LILTGSADN 159 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~dg 159 (309)
.++..+..|.+.|++++.+ + .++++|+.|-+|+|||++... ....+..|.+.|+++.|.+ ... .|++|+.||
T Consensus 34 ~~lF~~~aH~~sitavAVs--~-~~~aSGssDetI~IYDm~k~~--qlg~ll~HagsitaL~F~~-~~S~shLlS~sdDG 107 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVS--G-PYVASGSSDETIHIYDMRKRK--QLGILLSHAGSITALKFYP-PLSKSHLLSGSDDG 107 (362)
T ss_pred eccccccccccceeEEEec--c-eeEeccCCCCcEEEEeccchh--hhcceeccccceEEEEecC-CcchhheeeecCCC
Confidence 4456678899999999985 3 789999999999999998877 5677778999999999988 443 899999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|.+|+... ...+.++++|.+.|+.++++|.++ |..+.+.|+.+++||+-..... .+..+
T Consensus 108 ~i~iw~~~~------W~~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~~lr~WNLV~Gr~a-------------~v~~L 167 (362)
T KOG0294|consen 108 HIIIWRVGS------WELLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQVLRTWNLVRGRVA-------------FVLNL 167 (362)
T ss_pred cEEEEEcCC------eEEeeeecccccccceeEecCCCc-eEEEEcCCceeeeehhhcCccc-------------eeecc
Confidence 999999999 999999999999999999999999 4557788999999998662111 01111
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCC-------------------------------CCCCCCCCeEEEEEccccccCCh
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDD-------------------------------CDSTGGGGTLQIWRMSDLIYRPQ 288 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d-------------------------------~~s~~~dg~v~vw~~~~~~~~~~ 288 (309)
. + .-..+.|+|.|.++++.+.+- +.+|+.|+.|.+||.+ .
T Consensus 168 ~-~--~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~d------s 238 (362)
T KOG0294|consen 168 K-N--KATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTD------S 238 (362)
T ss_pred C-C--cceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccC------C
Confidence 1 1 112245555544433333211 0177788999999999 6
Q ss_pred hhHhHhhhcccceEEEeee
Q 021657 289 DEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 289 ~~~~~~~~~h~~~v~~~~~ 307 (309)
..++..+.+|..+|-++.+
T Consensus 239 ~~~~~~~~AH~~RVK~i~~ 257 (362)
T KOG0294|consen 239 DTPLTEFLAHENRVKDIAS 257 (362)
T ss_pred CccceeeecchhheeeeEE
Confidence 7888899999998877763
No 147
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.91 E-value=4e-23 Score=160.68 Aligned_cols=248 Identities=18% Similarity=0.294 Sum_probs=181.1
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
+..||.+ ..+.++.+|+.+.++|++.|+.+++|+-...+-... ......+.+..... .++.+...+...+.+.++..
T Consensus 363 ~v~gh~d-elwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~ 439 (626)
T KOG2106|consen 363 TVQGHGD-ELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQD 439 (626)
T ss_pred EEEeccc-ceeeEEcCCChhheeeccCcceEEEccCCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccce
Confidence 3468988 899999999999999999999999999222211111 11111122222222 45556667777788888866
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.+..-.. +.++++++|+|+| .+||.|+.|+.|+||-+..........-+.+..+|+.+.|++ +++++.+-+.|-.|.
T Consensus 440 lv~~~~d-~~~ls~v~ysp~G-~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~-Ds~~~~~~S~d~eiL 516 (626)
T KOG2106|consen 440 LVTIHTD-NEQLSVVRYSPDG-AFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSS-DSQFLVSNSGDYEIL 516 (626)
T ss_pred eEEEEec-CCceEEEEEcCCC-CEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecC-CCceEEeccCceEEE
Confidence 5554444 8899999999999 899999999999999998776545555455668999999999 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeec---------------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 163 MFDRRNLTSNGVGSPINKFE---------------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
+|......+ ...++.++ .+...|+.++-+.+.+ ++|+|.+.|.|++|...-.
T Consensus 517 yW~~~~~~~---~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~-~lA~gdd~g~v~lf~yPc~--------- 583 (626)
T KOG2106|consen 517 YWKPSECKQ---ITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEK-LLASGDDFGKVHLFSYPCS--------- 583 (626)
T ss_pred EEccccCcc---cceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhh-hhhccccCceEEEEccccC---------
Confidence 994433111 11111111 2344566666666666 6889999999999998751
Q ss_pred CcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 228 TTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
.+.....++.+|+..|++++|..++..++ +.+.|..|..|++
T Consensus 584 ---s~rA~~he~~ghs~~vt~V~Fl~~d~~li--------~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 584 ---SPRAPSHEYGGHSSHVTNVAFLCKDSHLI--------STGKDTSIMQWRL 625 (626)
T ss_pred ---CCcccceeeccccceeEEEEEeeCCceEE--------ecCCCceEEEEEe
Confidence 23456778899999999999999888777 4447799999987
No 148
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.91 E-value=8.5e-22 Score=153.38 Aligned_cols=278 Identities=17% Similarity=0.228 Sum_probs=193.8
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCC--------cEEEEeCCccccccc---cCCc---cccccCCCCceeecCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDK--------SVVLWSIQDHITSSA---TDPA---TAKSAGSSGSIIKQSPK 67 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg--------~i~vwd~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~ 67 (309)
|-+.||.. .|.|++.+|+.-++++|-.-| .+|+||..+...... +... ...+....+........
T Consensus 98 r~y~GH~d-dikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~ 176 (626)
T KOG2106|consen 98 RHYLGHND-DIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDD 176 (626)
T ss_pred ccccCCCC-ceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecC
Confidence 35678999 799999999998888776555 499999554321111 1111 01123344555666666
Q ss_pred CCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceE-EEee-ccCCceeEEEec
Q 021657 68 PGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI-KVEK-AHDADLHCVDWN 145 (309)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~-~~~~~v~~~~~~ 145 (309)
.....+.+|+............-+..|....|+|.+++++++++. |.+..|+++.+..... -.+. ..+..|.|++|.
T Consensus 177 s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~ 255 (626)
T KOG2106|consen 177 SNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFL 255 (626)
T ss_pred CCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEeeccccccceEEEEEEEc
Confidence 777888899988888887788888889999999999887777764 7899999987762111 1122 233679999999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
+ ++ -+++|..+|.|.||+.++ .+..+....|.+.|.+++...+|. |+ +|+.|..|..||- ...+.....
T Consensus 256 e-ng-dviTgDS~G~i~Iw~~~~------~~~~k~~~aH~ggv~~L~~lr~Gt-ll-SGgKDRki~~Wd~-~y~k~r~~e 324 (626)
T KOG2106|consen 256 E-NG-DVITGDSGGNILIWSKGT------NRISKQVHAHDGGVFSLCMLRDGT-LL-SGGKDRKIILWDD-NYRKLRETE 324 (626)
T ss_pred C-CC-CEEeecCCceEEEEeCCC------ceEEeEeeecCCceEEEEEecCcc-Ee-ecCccceEEeccc-ccccccccc
Confidence 8 55 478999999999999987 666666669999999999999998 45 7999999999993 222221111
Q ss_pred CCCcCC--------------------------CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 226 PRTTNY--------------------------PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 226 ~~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
-..... ....-....+|......++.+|+.+.++ |++.|+.+++|+
T Consensus 325 lPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~--------T~gqdk~v~lW~ 396 (626)
T KOG2106|consen 325 LPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLL--------TCGQDKHVRLWN 396 (626)
T ss_pred CchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhhee--------eccCcceEEEcc
Confidence 111000 0011223467888999999999888766 777779999999
Q ss_pred ccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 280 MSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
. .+++.+. ...+++.++.|||
T Consensus 397 -~-------~k~~wt~-~~~d~~~~~~fhp 417 (626)
T KOG2106|consen 397 -D-------HKLEWTK-IIEDPAECADFHP 417 (626)
T ss_pred -C-------CceeEEE-EecCceeEeeccC
Confidence 3 1222222 2346677777776
No 149
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.6e-22 Score=155.61 Aligned_cols=245 Identities=12% Similarity=0.222 Sum_probs=176.4
Q ss_pred ceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCcccc-----ccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 11 AEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAK-----SAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 11 ~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
+|.+.+|+|+|. .+++++....++.||+.+.....-..+.... ..........+......+.+.+....+++.+
T Consensus 259 Pi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli 338 (514)
T KOG2055|consen 259 PIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELI 338 (514)
T ss_pred ccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhh
Confidence 899999999998 8999999999999999876332221111111 1111111124444556677888888888777
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC-CceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD-ADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
..++ -.+.|.+++|+.++ ..|++++.+|.|.+||+++.. +...+.... -.-+++|.++ ++.+||+|+..|.|.|
T Consensus 339 ~s~K-ieG~v~~~~fsSds-k~l~~~~~~GeV~v~nl~~~~--~~~rf~D~G~v~gts~~~S~-ng~ylA~GS~~GiVNI 413 (514)
T KOG2055|consen 339 TSFK-IEGVVSDFTFSSDS-KELLASGGTGEVYVWNLRQNS--CLHRFVDDGSVHGTSLCISL-NGSYLATGSDSGIVNI 413 (514)
T ss_pred heee-eccEEeeEEEecCC-cEEEEEcCCceEEEEecCCcc--eEEEEeecCccceeeeeecC-CCceEEeccCcceEEE
Confidence 7665 46789999999998 677777889999999999886 566554322 2346777788 9999999999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC--CCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE--DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
||..+.......+++..+......|++|+|+++.+ +||.++. ...+++-.+... ..... +|. ...
T Consensus 414 Yd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q-iLAiaS~~~knalrLVHvPS~-TVFsN------fP~-----~n~ 480 (514)
T KOG2055|consen 414 YDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ-ILAIASRVKKNALRLVHVPSC-TVFSN------FPT-----SNT 480 (514)
T ss_pred eccchhhccCCCCchhhhhhhheeeeeeeeCcchh-hhhhhhhccccceEEEeccce-eeecc------CCC-----CCC
Confidence 99876555445788888888888999999999999 5666663 567888777651 11111 110 122
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.-+.|++++|+|.+.+++ .|..+|.+.+|.+.
T Consensus 481 ~vg~vtc~aFSP~sG~lA--------vGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 481 KVGHVTCMAFSPNSGYLA--------VGNEAGRVHLFKLH 512 (514)
T ss_pred cccceEEEEecCCCceEE--------eecCCCceeeEeec
Confidence 335689999999888765 55566999999986
No 150
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=5.3e-23 Score=161.75 Aligned_cols=232 Identities=17% Similarity=0.267 Sum_probs=169.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.|.||++ .|.|++|+.+|.+|++||.|-.+.|||.-. .
T Consensus 44 ~eL~GH~G-CVN~LeWn~dG~lL~SGSDD~r~ivWd~~~----------------------------------------~ 82 (758)
T KOG1310|consen 44 AELTGHTG-CVNCLEWNADGELLASGSDDTRLIVWDPFE----------------------------------------Y 82 (758)
T ss_pred hhhccccc-eecceeecCCCCEEeecCCcceEEeecchh----------------------------------------c
Confidence 46899999 999999999999999999999999999863 2
Q ss_pred Cccc-ccccccCCeEEEEEecC-CCcEEEEEcCCCeEEEEEcCCCC--------cceEEEeeccCCceeEEEeccCCCCe
Q 021657 82 GPRG-IYNGHEDTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGT--------SPVIKVEKAHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 82 ~~~~-~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~ 151 (309)
+++. .-.+|...|.++.|-|. +..++++|..|..|+++|+...+ ......+..|...|..++-.|...+.
T Consensus 83 KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Pht 162 (758)
T KOG1310|consen 83 KLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHT 162 (758)
T ss_pred ceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCce
Confidence 2222 23589999999999985 34789999999999999997421 12344556788899999999955599
Q ss_pred EEEEcCCCcEEEEecCCCCCCCC----CCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGV----GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
+.+++.||+|+-+|+|.+..... ...+..+...--...++.++|..+++||+|+.|-..++||.+...+.......
T Consensus 163 fwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~ 242 (758)
T KOG1310|consen 163 FWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGT 242 (758)
T ss_pred EEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCcc
Confidence 99999999999999998532111 11122222223456789999999999999999999999997654443333222
Q ss_pred CcCCCC---ceeeee-cCCC-----------cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 228 TTNYPA---GLFFQH-AGHR-----------DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 228 ~~~~~~---~~~~~~-~~~~-----------~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
....+. .++..+ .+|. ..++-++|+|+|..++++-+.+ .|+++|+..
T Consensus 243 ~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gE--------hVYlfdvn~ 304 (758)
T KOG1310|consen 243 MNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGE--------HVYLFDVNE 304 (758)
T ss_pred ccCCCCcccchhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCe--------EEEEEeecC
Confidence 221111 111111 1121 1257789999999999987776 899999985
No 151
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.91 E-value=2.4e-22 Score=146.50 Aligned_cols=248 Identities=19% Similarity=0.266 Sum_probs=181.0
Q ss_pred CCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCcccc---c-cCCCCceeecCCCCCCCCcccCCCC
Q 021657 5 TGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK---S-AGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
.+|+- .|.++.|.| |...+.+++.|.+++|||..+......+.-.... . ......-..++.+..+..+++-|+.
T Consensus 98 ~~Hky-~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~ 176 (397)
T KOG4283|consen 98 NGHKY-AISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA 176 (397)
T ss_pred cccee-eeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence 57888 899999999 6678889999999999999887544444332222 1 1112223456667888999999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC-------------cceEEEeeccCCceeEEEecc
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-------------SPVIKVEKAHDADLHCVDWNP 146 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-------------~~~~~~~~~~~~~v~~~~~~~ 146 (309)
.+...+.+.+|.+.|.++.|+|..+..|++|+.||.|++||++... .+..+...+|.+.+..++|..
T Consensus 177 SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tS 256 (397)
T KOG4283|consen 177 SGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTS 256 (397)
T ss_pred CCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecc
Confidence 9999999999999999999999988899999999999999997541 122333457888999999999
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCCCC--CCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccC
Q 021657 147 LDDNLILTGSADNSVRMFDRRNLTSNG--VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224 (309)
Q Consensus 147 ~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~ 224 (309)
++.++++.+.|..+++|+..+..... .++.+..-.. .-.+. +. +-+.. +++---.++.+.++.+-.
T Consensus 257 -d~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~-~~~~~-~~-~~~s~-vfv~~p~~~~lall~~~s------- 324 (397)
T KOG4283|consen 257 -DARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTT-SFAVH-IQ-SMDSD-VFVLFPNDGSLALLNLLE------- 324 (397)
T ss_pred -cchhhhhccCccceEEeecccCcccccccccccccccc-cceEE-Ee-ecccc-eEEEEecCCeEEEEEccC-------
Confidence 99999999999999999998732100 0111111111 11111 22 22222 333334458888888876
Q ss_pred CCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 225 GPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...+..+..|...|.+.++-|+-+... +|..|+.+..|-..
T Consensus 325 --------gs~ir~l~~h~k~i~c~~~~~~fq~~~--------tg~~d~ni~~w~p~ 365 (397)
T KOG4283|consen 325 --------GSFVRRLSTHLKRINCAAYRPDFEQCF--------TGDMNGNIYMWSPA 365 (397)
T ss_pred --------ceEEEeeecccceeeEEeecCchhhhh--------ccccCCcccccccc
Confidence 455667788888999999999888877 88888999999874
No 152
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.90 E-value=1.3e-22 Score=166.61 Aligned_cols=265 Identities=12% Similarity=0.200 Sum_probs=193.1
Q ss_pred cccCCCCCcceEEEEEC-CCCCEEEEecCCCcEEEEeCCccccccccCC---------ccccccCC--CCcee-------
Q 021657 2 EILTGHQDNAEFALAMC-PTEPYVLSGGKDKSVVLWSIQDHITSSATDP---------ATAKSAGS--SGSII------- 62 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~-~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---------~~~~~~~~--~~~~~------- 62 (309)
|.-.||.. |-.|+.|. .+|..+.+++.|++.+.+++........... ........ ...+.
T Consensus 328 R~R~GHs~-Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~ 406 (910)
T KOG1539|consen 328 RSRGGHSA-PPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENA 406 (910)
T ss_pred eeccCCCC-CchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccc
Confidence 44468999 77999998 5788999999999999998764311111100 00000000 00000
Q ss_pred -------ecCCCCCCCCcccCCCCCcCc-cccc-----ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceE
Q 021657 63 -------KQSPKPGDGNDKAADGPSVGP-RGIY-----NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 129 (309)
Q Consensus 63 -------~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 129 (309)
....-.+....+.|+..+... ...+ +.....+++++.++-| ++.+.|+..|.|-+|++.++- ..
T Consensus 407 RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CG-NF~~IG~S~G~Id~fNmQSGi--~r 483 (910)
T KOG1539|consen 407 REKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCG-NFVFIGYSKGTIDRFNMQSGI--HR 483 (910)
T ss_pred hhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccC-ceEEEeccCCeEEEEEcccCe--ee
Confidence 111112234455666555443 1112 2234678999999998 889999999999999999887 45
Q ss_pred EEe---eccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC
Q 021657 130 KVE---KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206 (309)
Q Consensus 130 ~~~---~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 206 (309)
..+ ..|..+|+.++.+. .++.+++++.+|.+.+||... ..++..+. ....+..+..+.... ++|.+.+
T Consensus 484 ~sf~~~~ah~~~V~gla~D~-~n~~~vsa~~~Gilkfw~f~~------k~l~~~l~-l~~~~~~iv~hr~s~-l~a~~~d 554 (910)
T KOG1539|consen 484 KSFGDSPAHKGEVTGLAVDG-TNRLLVSAGADGILKFWDFKK------KVLKKSLR-LGSSITGIVYHRVSD-LLAIALD 554 (910)
T ss_pred cccccCccccCceeEEEecC-CCceEEEccCcceEEEEecCC------cceeeeec-cCCCcceeeeeehhh-hhhhhcC
Confidence 555 58999999999998 888999999999999999998 66666666 356678888888777 5789999
Q ss_pred CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 207 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
|-.|+++|+.+ ...+..+.+|...|++++|||++.+++ +++.|++|++||+.
T Consensus 555 df~I~vvD~~t---------------~kvvR~f~gh~nritd~~FS~DgrWli--------sasmD~tIr~wDlp----- 606 (910)
T KOG1539|consen 555 DFSIRVVDVVT---------------RKVVREFWGHGNRITDMTFSPDGRWLI--------SASMDSTIRTWDLP----- 606 (910)
T ss_pred ceeEEEEEchh---------------hhhhHHhhccccceeeeEeCCCCcEEE--------EeecCCcEEEEecc-----
Confidence 99999999987 456778899999999999999999877 66667999999998
Q ss_pred ChhhHhHhhhcccceEEEeeeCC
Q 021657 287 PQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 287 ~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
++.++-.+. -..+..++.|+|
T Consensus 607 -t~~lID~~~-vd~~~~sls~SP 627 (910)
T KOG1539|consen 607 -TGTLIDGLL-VDSPCTSLSFSP 627 (910)
T ss_pred -CcceeeeEe-cCCcceeeEECC
Confidence 566655443 456777888777
No 153
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=5.5e-22 Score=150.19 Aligned_cols=178 Identities=17% Similarity=0.271 Sum_probs=139.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+.+|.+ .|.++.|+.++++|++|+.|..++||+++...... +.
T Consensus 50 KD~~~H~G-CiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k----------------------------------~~ 94 (609)
T KOG4227|consen 50 KDVREHTG-CINALQFSHNDRFLASGGDDMHGRVWNVDELMVRK----------------------------------TP 94 (609)
T ss_pred hhhhhhcc-ccceeeeccCCeEEeecCCcceeeeechHHHHhhc----------------------------------CC
Confidence 35789999 99999999999999999999999999998542221 22
Q ss_pred Ccccccc-cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe--eccCCceeEEEeccCCCCeEEEEcCC
Q 021657 82 GPRGIYN-GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE--KAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 82 ~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
+++.... .|...|.|++|...+ ..+.+|..+++|.+.|+++.+ .+..+ ....+.|+.|..+| ..+.|++.+.+
T Consensus 95 KPI~~~~~~H~SNIF~L~F~~~N-~~~~SG~~~~~VI~HDiEt~q--si~V~~~~~~~~~VY~m~~~P-~DN~~~~~t~~ 170 (609)
T KOG4227|consen 95 KPIGVMEHPHRSNIFSLEFDLEN-RFLYSGERWGTVIKHDIETKQ--SIYVANENNNRGDVYHMDQHP-TDNTLIVVTRA 170 (609)
T ss_pred CCceeccCccccceEEEEEccCC-eeEecCCCcceeEeeecccce--eeeeecccCcccceeecccCC-CCceEEEEecC
Confidence 3344433 356899999998876 889999999999999999877 33332 22335899999999 78999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccc
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~ 221 (309)
+.|.+||.+..+.. +.++. .........++.|+|..+.|+++.+..+-+-+||++....+
T Consensus 171 ~~V~~~D~Rd~~~~--~~~~~-~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~ 230 (609)
T KOG4227|consen 171 KLVSFIDNRDRQNP--ISLVL-PANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARP 230 (609)
T ss_pred ceEEEEeccCCCCC--Cceee-ecCCCccceeeeecCCCceeEEeccccCCCCceeeccccch
Confidence 99999999974311 22221 22234567889999999999999999999999999986544
No 154
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.90 E-value=1.6e-22 Score=155.36 Aligned_cols=206 Identities=16% Similarity=0.237 Sum_probs=162.0
Q ss_pred CCCCCcCcccccccccCCeEEEEEecCCC-cEEEEEcCCCeEEEEEcCCCC--cceEEEeeccCCceeEEEeccCCCCeE
Q 021657 76 ADGPSVGPRGIYNGHEDTVEDVTFCPSSA-QEFCSVGDDSCLILWDARVGT--SPVIKVEKAHDADLHCVDWNPLDDNLI 152 (309)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l 152 (309)
.++.........+-+.++|++++|+|... .++++|..-|.|-+||+.+.+ ...+..+..|..+|.+|.|+|.+...+
T Consensus 171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i 250 (498)
T KOG4328|consen 171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQI 250 (498)
T ss_pred cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhe
Confidence 34444555566677899999999999876 788999999999999996332 335667788999999999999888999
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
++.+.||+|++-|+.... .+.+.........+.++.|+.+...++ .+..=|.+.+||++..+..+
T Consensus 251 ~ssSyDGtiR~~D~~~~i----~e~v~s~~~d~~~fs~~d~~~e~~~vl-~~~~~G~f~~iD~R~~~s~~---------- 315 (498)
T KOG4328|consen 251 YSSSYDGTIRLQDFEGNI----SEEVLSLDTDNIWFSSLDFSAESRSVL-FGDNVGNFNVIDLRTDGSEY---------- 315 (498)
T ss_pred eeeccCceeeeeeecchh----hHHHhhcCccceeeeeccccCCCccEE-EeecccceEEEEeecCCccc----------
Confidence 999999999999998743 344444444456678889998888665 66666799999999855533
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+.-|...|.+|+++|..+++++++|.| ++++|||++.+..+++ ++-....|...|.++.|+|
T Consensus 316 ----~~~~lh~kKI~sv~~NP~~p~~laT~s~D-------~T~kIWD~R~l~~K~s--p~lst~~HrrsV~sAyFSP 379 (498)
T KOG4328|consen 316 ----ENLRLHKKKITSVALNPVCPWFLATASLD-------QTAKIWDLRQLRGKAS--PFLSTLPHRRSVNSAYFSP 379 (498)
T ss_pred ----hhhhhhhcccceeecCCCCchheeecccC-------cceeeeehhhhcCCCC--cceecccccceeeeeEEcC
Confidence 34456788999999999999999966666 9999999997764443 2333446999999999998
No 155
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.90 E-value=3.8e-23 Score=165.38 Aligned_cols=123 Identities=17% Similarity=0.417 Sum_probs=103.8
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC-CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS-NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
..|+.+.|+|.+...|++++.||.|++|.+..... +....+-..+..|...|+++.|+|--..+|++++.|-+|++||+
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl 707 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDL 707 (1012)
T ss_pred ceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeeh
Confidence 45778999999999999999999999999876432 22244556778899999999999977778999999999999999
Q ss_pred CcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 216 EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++ ......+.+|.+.|.+++|+|+|..++ |.+.||+|++|+-+.
T Consensus 708 ~~---------------~~~~~~l~gHtdqIf~~AWSpdGr~~A--------tVcKDg~~rVy~Prs 751 (1012)
T KOG1445|consen 708 AN---------------AKLYSRLVGHTDQIFGIAWSPDGRRIA--------TVCKDGTLRVYEPRS 751 (1012)
T ss_pred hh---------------hhhhheeccCcCceeEEEECCCCccee--------eeecCceEEEeCCCC
Confidence 98 445567899999999999999988766 666779999999885
No 156
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.90 E-value=2.7e-22 Score=151.95 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=180.8
Q ss_pred CCCCcceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 6 GHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
-|...+|.++.|.++.. .|+||+.|..|++|.+......... .+.+.+
T Consensus 10 wH~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~-------------------------------~~V~y~ 58 (434)
T KOG1009|consen 10 WHDHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGD-------------------------------MKVEYL 58 (434)
T ss_pred ecCCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCc-------------------------------eeEEEe
Confidence 35556899999999766 9999999999999998753211100 122345
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcC--------C------CCcceEEEeeccCCceeEEEeccCCCC
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR--------V------GTSPVIKVEKAHDADLHCVDWNPLDDN 150 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~--------~------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 150 (309)
..+..|...|+++.|+|+| .+|++|+++|.|.+|-.. + ......+.+.+|...|..++|+| +++
T Consensus 59 s~Ls~H~~aVN~vRf~p~g-elLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~-d~~ 136 (434)
T KOG1009|consen 59 SSLSRHTRAVNVVRFSPDG-ELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP-DSN 136 (434)
T ss_pred ecccCCcceeEEEEEcCCc-CeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC-CCc
Confidence 6778899999999999999 899999999999999765 1 22345566778999999999999 999
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC----C
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG----P 226 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~----~ 226 (309)
++++++.|..+++||+.. +.....+..|...+..++|.|-+++ +++-+.|...+.+.+.......... +
T Consensus 137 ~l~s~s~dns~~l~Dv~~------G~l~~~~~dh~~yvqgvawDpl~qy-v~s~s~dr~~~~~~~~~~~~~~~~~~~~m~ 209 (434)
T KOG1009|consen 137 FLVSGSVDNSVRLWDVHA------GQLLAILDDHEHYVQGVAWDPLNQY-VASKSSDRHPEGFSAKLKQVIKRHGLDIMP 209 (434)
T ss_pred eeeeeeccceEEEEEecc------ceeEeeccccccccceeecchhhhh-hhhhccCcccceeeeeeeeeeeeeeeeEee
Confidence 999999999999999999 9999999999999999999999997 5688888877777765522111110 0
Q ss_pred -CCcCCCCceeeeec---CCCcceeeEEEccCCCeEEEEec-CCCCCCCCC--CeEEEEEccccccCChhhHhHhhhccc
Q 021657 227 -RTTNYPAGLFFQHA---GHRDKVVDFHWNASDPWTVVSVS-DDCDSTGGG--GTLQIWRMSDLIYRPQDEVLAELEKFK 299 (309)
Q Consensus 227 -~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~s~s-~d~~s~~~d--g~v~vw~~~~~~~~~~~~~~~~~~~h~ 299 (309)
...+........+. .-..-...++|+|+|..++.-++ .+ +|+.- +..++|+-.. ..+++..+....
T Consensus 210 ~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~--~g~~~~~n~tYvfsrk~-----l~rP~~~lp~~~ 282 (434)
T KOG1009|consen 210 AKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFK--VGGGVFRNTSYVFSRKD-----LKRPAARLPSPK 282 (434)
T ss_pred ecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceee--eCCceeeceeEeecccc-----ccCceeecCCCC
Confidence 00000001111111 11223567899998876553221 11 22221 3445555443 455666777777
Q ss_pred ceEEEeeeCC
Q 021657 300 AHVISCTSKP 309 (309)
Q Consensus 300 ~~v~~~~~~P 309 (309)
.++..+.|+|
T Consensus 283 k~~lavr~~p 292 (434)
T KOG1009|consen 283 KPALAVRFSP 292 (434)
T ss_pred cceEEEEeee
Confidence 7888887776
No 157
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=7.3e-22 Score=145.46 Aligned_cols=173 Identities=20% Similarity=0.376 Sum_probs=129.4
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc------------------------------------
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP------------------------------------ 127 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------------------------------ 127 (309)
+..+++|.+.|++++|+.+| ..|++++.|+.|++|+++.....
T Consensus 79 ~~~LKgH~~~vt~~~FsSdG-K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDG-KKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhccCCceeeeEEcCCC-ceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 35678999999999999999 88999999999999998643210
Q ss_pred eEE---------------------EeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCC
Q 021657 128 VIK---------------------VEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA 186 (309)
Q Consensus 128 ~~~---------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 186 (309)
.+. ....|...+..+-... ++.++++++.|..|.+|+++ ++.+..+.....
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-------Gq~L~~idtnq~ 229 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-------GQLLQSIDTNQS 229 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-------Cceeeeeccccc
Confidence 000 0011223334444444 67899999999999999998 678888887777
Q ss_pred CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCC
Q 021657 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDC 266 (309)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~ 266 (309)
.-+..+.+|+|++ +|+++.---|++|.+--.+.-. -.....++.+.+|...|..++|+|+...+ +++|
T Consensus 230 ~n~~aavSP~GRF-ia~~gFTpDVkVwE~~f~kdG~-------fqev~rvf~LkGH~saV~~~aFsn~S~r~-vtvS--- 297 (420)
T KOG2096|consen 230 SNYDAAVSPDGRF-IAVSGFTPDVKVWEPIFTKDGT-------FQEVKRVFSLKGHQSAVLAAAFSNSSTRA-VTVS--- 297 (420)
T ss_pred cccceeeCCCCcE-EEEecCCCCceEEEEEeccCcc-------hhhhhhhheeccchhheeeeeeCCCccee-EEEe---
Confidence 7788899999997 5677777889999975422110 01134578899999999999999987764 4444
Q ss_pred CCCCCCCeEEEEEcc
Q 021657 267 DSTGGGGTLQIWRMS 281 (309)
Q Consensus 267 ~s~~~dg~v~vw~~~ 281 (309)
.||++++||++
T Consensus 298 ----kDG~wriwdtd 308 (420)
T KOG2096|consen 298 ----KDGKWRIWDTD 308 (420)
T ss_pred ----cCCcEEEeecc
Confidence 55999999987
No 158
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.89 E-value=1.5e-21 Score=155.98 Aligned_cols=219 Identities=18% Similarity=0.303 Sum_probs=157.1
Q ss_pred EEECCC---CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 15 LAMCPT---EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 15 ~~~~~~---~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
..|++. ...|+.+.+||.|.++|........ ....+.....|.
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~----------------------------------ee~~lk~~~aH~ 100 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRL----------------------------------EERQLKKPLAHK 100 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcch----------------------------------hhhhhccccccc
Confidence 566653 3468899999999999987532110 112245566799
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..|.++.|-| ++..|++++.|.+++.||+.+.+..-...+.+|...|.+++|.|.+...|++|+.||.|.|||++-...
T Consensus 101 nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~ 179 (720)
T KOG0321|consen 101 NAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGV 179 (720)
T ss_pred ceeEeeccCC-CceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccch
Confidence 9999999999 668999999999999999998884444458899999999999998899999999999999999985320
Q ss_pred --------------CC-------CCCceeeeccCCCCeeE---EEEecCCCcEEEEecC-CCcEEEEeCCcccccccCCC
Q 021657 172 --------------NG-------VGSPINKFEGHSAAVLC---VQWSPDKSSVFGSSAE-DGLLNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 172 --------------~~-------~~~~~~~~~~~~~~v~~---~~~~~~~~~l~~~~~~-dg~i~iwd~~~~~~~~~~~~ 226 (309)
.. ..+.+.....+...|.+ +.+..|... ||+++. |+.|+|||+++........+
T Consensus 180 d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~t-laSaga~D~~iKVWDLRk~~~~~r~ep 258 (720)
T KOG0321|consen 180 DALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDEST-LASAGAADSTIKVWDLRKNYTAYRQEP 258 (720)
T ss_pred hhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccce-eeeccCCCcceEEEeecccccccccCC
Confidence 00 01122222334444544 445556664 567766 99999999998655544333
Q ss_pred CCcCCCCceeeeecCC---CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 227 RTTNYPAGLFFQHAGH---RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
... ..+..| ...+.++.....|.+|+|+|.+ +.|++|++....
T Consensus 259 ~~~-------~~~~t~skrs~G~~nL~lDssGt~L~AsCtD--------~sIy~ynm~s~s 304 (720)
T KOG0321|consen 259 RGS-------DKYPTHSKRSVGQVNLILDSSGTYLFASCTD--------NSIYFYNMRSLS 304 (720)
T ss_pred Ccc-------cCccCcccceeeeEEEEecCCCCeEEEEecC--------CcEEEEeccccC
Confidence 222 112222 3467888888889999987763 799999998653
No 159
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.89 E-value=1.4e-21 Score=160.60 Aligned_cols=200 Identities=16% Similarity=0.268 Sum_probs=164.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+++++.++.|++.+.|+..|.|-+|++++++....+. .-..|
T Consensus 450 ~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~-------------------------------------~~~ah 492 (910)
T KOG1539|consen 450 NATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFG-------------------------------------DSPAH 492 (910)
T ss_pred ceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccc-------------------------------------cCccc
Confidence 68999999999999999999999999999775443331 11469
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
.++|++++....+ +.+++++.+|.++.||..... ....+. -..++.++.++. ....++++..|-.|+++|..+
T Consensus 493 ~~~V~gla~D~~n-~~~vsa~~~Gilkfw~f~~k~--l~~~l~-l~~~~~~iv~hr-~s~l~a~~~ddf~I~vvD~~t-- 565 (910)
T KOG1539|consen 493 KGEVTGLAVDGTN-RLLVSAGADGILKFWDFKKKV--LKKSLR-LGSSITGIVYHR-VSDLLAIALDDFSIRVVDVVT-- 565 (910)
T ss_pred cCceeEEEecCCC-ceEEEccCcceEEEEecCCcc--eeeeec-cCCCcceeeeee-hhhhhhhhcCceeEEEEEchh--
Confidence 9999999998887 889999999999999997665 344432 356788888888 888999999999999999999
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
.+.++.|.+|...|++++|||||+++ ++++.|++|++||+.+ ..++ ..-.-..+++++.
T Consensus 566 ----~kvvR~f~gh~nritd~~FS~DgrWl-isasmD~tIr~wDlpt---------------~~lI-D~~~vd~~~~sls 624 (910)
T KOG1539|consen 566 ----RKVVREFWGHGNRITDMTFSPDGRWL-ISASMDSTIRTWDLPT---------------GTLI-DGLLVDSPCTSLS 624 (910)
T ss_pred ----hhhhHHhhccccceeeeEeCCCCcEE-EEeecCCcEEEEeccC---------------ccee-eeEecCCcceeeE
Confidence 88999999999999999999999985 5999999999999998 2222 2223456889999
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|+|++++|+.+..+. .-|++|--..
T Consensus 625 ~SPngD~LAT~Hvd~-------~gIylWsNks 649 (910)
T KOG1539|consen 625 FSPNGDFLATVHVDQ-------NGIYLWSNKS 649 (910)
T ss_pred ECCCCCEEEEEEecC-------ceEEEEEchh
Confidence 999999877544443 7899998653
No 160
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.89 E-value=1e-20 Score=149.96 Aligned_cols=254 Identities=12% Similarity=0.108 Sum_probs=162.5
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCc---cccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEE
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPA---TAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDV 97 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 97 (309)
+..+++++.|+.|++||+.++......... ............ +.....++.+.+|+..+.+....+..+.. +..+
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l-~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~ 78 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLL-YVCASDSDTIQVIDLATGEVIGTLPSGPD-PELF 78 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEE-EEEECCCCeEEEEECCCCcEEEeccCCCC-ccEE
Confidence 357889999999999999876432222211 111111222211 12233467788899888777666655443 5678
Q ss_pred EEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC-cEEEEecCCCCCCCCCC
Q 021657 98 TFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN-SVRMFDRRNLTSNGVGS 176 (309)
Q Consensus 98 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~ 176 (309)
.|+|++..++++++.++.|++||+.+.+ ....+. +...+.+++|+| ++.+++++..++ .+.+||.++ ++
T Consensus 79 ~~~~~g~~l~~~~~~~~~l~~~d~~~~~--~~~~~~-~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~d~~~------~~ 148 (300)
T TIGR03866 79 ALHPNGKILYIANEDDNLVTVIDIETRK--VLAEIP-VGVEPEGMAVSP-DGKIVVNTSETTNMAHFIDTKT------YE 148 (300)
T ss_pred EECCCCCEEEEEcCCCCeEEEEECCCCe--EEeEee-CCCCcceEEECC-CCCEEEEEecCCCeEEEEeCCC------Ce
Confidence 9999985455666778999999998765 444443 234568899999 999999888765 567789887 55
Q ss_pred ceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC
Q 021657 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256 (309)
Q Consensus 177 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 256 (309)
.+..... ...+..++|+|+++++++++..++.|++||++.... ........ ............++|+|++.
T Consensus 149 ~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~-~~~~~~~~-------~~~~~~~~~~~~i~~s~dg~ 219 (300)
T TIGR03866 149 IVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV-IKKITFEI-------PGVHPEAVQPVGIKLTKDGK 219 (300)
T ss_pred EEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee-eeeeeecc-------cccccccCCccceEECCCCC
Confidence 5544432 334578999999998766766799999999987321 11000000 00000011235688999999
Q ss_pred eEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 257 WTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 257 ~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.++++.+.+ +.+.+||+. +.+.+..+ .+...+.+++|+|
T Consensus 220 ~~~~~~~~~-------~~i~v~d~~------~~~~~~~~-~~~~~~~~~~~~~ 258 (300)
T TIGR03866 220 TAFVALGPA-------NRVAVVDAK------TYEVLDYL-LVGQRVWQLAFTP 258 (300)
T ss_pred EEEEEcCCC-------CeEEEEECC------CCcEEEEE-EeCCCcceEEECC
Confidence 877644333 689999998 44444333 2445788888886
No 161
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1e-20 Score=138.69 Aligned_cols=233 Identities=16% Similarity=0.189 Sum_probs=167.6
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC-CccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD-PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
-|.. ++.+++|.+ ...+++|+.||.|+.+|+.++....... ...............+..+.-+..+++||.+.....
T Consensus 52 ~~~~-plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~ 129 (323)
T KOG1036|consen 52 KHGA-PLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVV 129 (323)
T ss_pred ecCC-ceeeeeccC-CceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccc
Confidence 3676 899999987 4578999999999999998774332221 111122222233445556777899999999975555
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
..+.. ...|.++.... +.|+.|+.|..+.+||++....+.......-+-.++|+++-| ++.-+++++-||.|.+=
T Consensus 130 ~~~d~-~kkVy~~~v~g---~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~p-n~eGy~~sSieGRVavE 204 (323)
T KOG1036|consen 130 GTFDQ-GKKVYCMDVSG---NRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVP-NGEGYVVSSIEGRVAVE 204 (323)
T ss_pred ccccc-CceEEEEeccC---CEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEec-CCCceEEEeecceEEEE
Confidence 55543 34788887643 568899999999999999887555444445566899999999 89999999999998875
Q ss_pred ecCCCCCCCCCCceeeeccCC---------CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 165 DRRNLTSNGVGSPINKFEGHS---------AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
.+...+.. .+....|+.|. -+|++|+|+|-... ||+|+.||.|.+||+.+. +.
T Consensus 205 ~~d~s~~~--~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~t-faTgGsDG~V~~Wd~~~r---------------Kr 266 (323)
T KOG1036|consen 205 YFDDSEEA--QSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGT-FATGGSDGIVNIWDLFNR---------------KR 266 (323)
T ss_pred ccCCchHH--hhhceeEEeeecccCCceEEEEeceeEeccccce-EEecCCCceEEEccCcch---------------hh
Confidence 55542110 23344555553 36999999998764 789999999999999872 23
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEec
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s 263 (309)
+..+......|.+++|+.+|..|+++.|
T Consensus 267 l~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 267 LKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred hhhccCCCCceEEEEeccCCCeEEEEec
Confidence 3445555667999999999987776655
No 162
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.88 E-value=5.8e-21 Score=148.63 Aligned_cols=191 Identities=17% Similarity=0.317 Sum_probs=158.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.|++|++ .|+++.++-...+||+++..|.|.|..+.++.....+.
T Consensus 115 r~lkdh~s-tvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~--------------------------------- 160 (673)
T KOG4378|consen 115 RFLKDHQS-TVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT--------------------------------- 160 (673)
T ss_pred hhccCCcc-eeEEEEecCCcceeEEeccCCcEEEEecccCcccccee---------------------------------
Confidence 57899998 89999999999999999999999999998643322211
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.+....|.-+.|+|..+.+|.+++.+|.|.+||+. +..+.......|..+...++|+|.+..+|++.+.|..|
T Consensus 161 ------~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~-g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki 233 (673)
T KOG4378|consen 161 ------IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQ-GMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKI 233 (673)
T ss_pred ------cCCCCeEEEeecccccceeeEeeccCCeEEEEecc-CCCcccchhhhccCCcCcceecCCccceEEEecccceE
Confidence 11234567899999988889999999999999996 44456777789999999999999777899999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
.+||.+. .+....+. -..+...++|.++|.+ |++|...|.|..||++... .++.....
T Consensus 234 ~~yD~~s------~~s~~~l~-y~~Plstvaf~~~G~~-L~aG~s~G~~i~YD~R~~k--------------~Pv~v~sa 291 (673)
T KOG4378|consen 234 NIYDIRS------QASTDRLT-YSHPLSTVAFSECGTY-LCAGNSKGELIAYDMRSTK--------------APVAVRSA 291 (673)
T ss_pred EEeeccc------ccccceee-ecCCcceeeecCCceE-EEeecCCceEEEEecccCC--------------CCceEeee
Confidence 9999997 55555554 3568899999999996 6799999999999999843 35667788
Q ss_pred CCcceeeEEEccCC
Q 021657 242 HRDKVVDFHWNASD 255 (309)
Q Consensus 242 ~~~~v~~~~~~~~~ 255 (309)
|...|++++|-|..
T Consensus 292 h~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 292 HDASVTRVAFQPSP 305 (673)
T ss_pred cccceeEEEeeecc
Confidence 99999999998843
No 163
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.88 E-value=3.8e-21 Score=155.03 Aligned_cols=223 Identities=23% Similarity=0.375 Sum_probs=166.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCC-----cEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDK-----SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 76 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (309)
+.|-||.- .|++++.+|+|+++||+.... .|++|+..
T Consensus 519 ~KLYGHGy-Ev~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~------------------------------------- 560 (764)
T KOG1063|consen 519 HKLYGHGY-EVYALAISPTGNLIASACKSSLKEHAVIRLWNTA------------------------------------- 560 (764)
T ss_pred HHhccCce-eEEEEEecCCCCEEeehhhhCCccceEEEEEecc-------------------------------------
Confidence 56789998 899999999999999998754 47888876
Q ss_pred CCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 77 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
+....+.+.+|.-.|+.++|+|+| ++|++.+.|.++.+|........ .....+.|..-|....|+| ++.+|++
T Consensus 561 ---~W~~~~~L~~HsLTVT~l~FSpdg-~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~p-de~~FaT 635 (764)
T KOG1063|consen 561 ---NWLQVQELEGHSLTVTRLAFSPDG-RYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSP-DEKYFAT 635 (764)
T ss_pred ---chhhhheecccceEEEEEEECCCC-cEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCc-ccceeEE
Confidence 344456788999999999999999 89999999999999997543321 1223678999999999999 9999999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceee--eccCCCCeeEEEEecC----CCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINK--FEGHSAAVLCVQWSPD----KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~----~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
+++|.+|.+|...... .+.+.. ...+...|+++++.|- ...+++.|-+.|.|.+|......+........
T Consensus 636 aSRDK~VkVW~~~~~~----d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~ 711 (764)
T KOG1063|consen 636 ASRDKKVKVWEEPDLR----DKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFN 711 (764)
T ss_pred ecCCceEEEEeccCch----hhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeee
Confidence 9999999999988731 133333 2346788999998763 33478999999999999977433222111111
Q ss_pred cCCCCceeeeecCCCcceeeEEEccC--------CC-eEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 229 TNYPAGLFFQHAGHRDKVVDFHWNAS--------DP-WTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~-~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.........+|...|+.+.|.|. .. +-+++| +.|..++++++.
T Consensus 712 ---~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~la~~-------g~D~~vri~nv~ 763 (764)
T KOG1063|consen 712 ---LDTRLCATIGPDSAVNRLLWRPTCSDDWVEDKEWLNLAVG-------GDDESVRIFNVD 763 (764)
T ss_pred ---eccccccccChHHhhheeEeccccccccccccceeEEeee-------cccceeEEeecc
Confidence 01122344567889999999975 22 335544 445999999875
No 164
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2.3e-21 Score=143.93 Aligned_cols=176 Identities=19% Similarity=0.343 Sum_probs=132.0
Q ss_pred CcccCCCCCcceEEEEECC--CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 1 MEILTGHQDNAEFALAMCP--TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
++.+++|.. .+..+.|.. ....+.+|+.||+||+||++.....
T Consensus 63 l~~fk~~~~-~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~---------------------------------- 107 (376)
T KOG1188|consen 63 LEEFKGPPA-TTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES---------------------------------- 107 (376)
T ss_pred hheecCCCC-cccceEEecCCCCCeeEEeccCCeEEEEEeecchhh----------------------------------
Confidence 356788888 889999977 3567889999999999999853211
Q ss_pred CCcCccccccccc-CCeEEEEEecCCCcEEEEEc----CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 79 PSVGPRGIYNGHE-DTVEDVTFCPSSAQEFCSVG----DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 79 ~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
.......+. .+..+++.+..+ +++++|. .+-.|.+||++..+++.......|.+.|++++|+|.+.++|+
T Consensus 108 ----a~~~~~~~~~~~f~~ld~nck~-~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLl 182 (376)
T KOG1188|consen 108 ----ARISWTQQSGTPFICLDLNCKK-NIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLL 182 (376)
T ss_pred ----hheeccCCCCCcceEeeccCcC-CeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEE
Confidence 122233343 455666665555 6677765 467899999998886666777889999999999999999999
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
+|+.||-|.+||+..... ...+...-.+...|.++.|..++-.-+.+-+......+|+++...
T Consensus 183 SGSvDGLvnlfD~~~d~E---eDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 183 SGSVDGLVNLFDTKKDNE---EDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred eecccceEEeeecCCCcc---hhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence 999999999999987533 223333334677899999998882224477788999999998744
No 165
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=6.8e-21 Score=140.20 Aligned_cols=251 Identities=14% Similarity=0.232 Sum_probs=163.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccc---cccCCC--CceeecCCCCCCCCcccC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATA---KSAGSS--GSIIKQSPKPGDGNDKAA 76 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~ 76 (309)
++|.+|.. +|++++||+||+.|+|+|.|..|.+||+..+........... ...... ........... ..+...
T Consensus 59 r~lsaH~~-pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~s-p~vi~~ 136 (405)
T KOG1273|consen 59 RMLSAHVR-PITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEES-PVVIDF 136 (405)
T ss_pred hhhhcccc-ceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCC-cEEEEe
Confidence 57889999 999999999999999999999999999998743332221111 111111 11111110000 111101
Q ss_pred CCCCcCccccc-cc-ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC-CceeEEEeccCCCCeEE
Q 021657 77 DGPSVGPRGIY-NG-HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD-ADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 77 ~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~ 153 (309)
.......+..- .+ -+..-.+..|.+.| +++++|...|.+.++|..+.+ ++..++-.. ..|..+.++. .+..|+
T Consensus 137 s~~~h~~Lp~d~d~dln~sas~~~fdr~g-~yIitGtsKGkllv~~a~t~e--~vas~rits~~~IK~I~~s~-~g~~li 212 (405)
T KOG1273|consen 137 SDPKHSVLPKDDDGDLNSSASHGVFDRRG-KYIITGTSKGKLLVYDAETLE--CVASFRITSVQAIKQIIVSR-KGRFLI 212 (405)
T ss_pred cCCceeeccCCCccccccccccccccCCC-CEEEEecCcceEEEEecchhe--eeeeeeechheeeeEEEEec-cCcEEE
Confidence 00000000000 00 01111223577877 899999999999999999887 666665555 6889999998 999999
Q ss_pred EEcCCCcEEEEecCCCCCCCC---CCceeeecc--CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGV---GSPINKFEG--HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
.-+.|+.||.|+++.....+. .++.++++. .+..-.+++|+.+|.|++|+...-..++||.-..
T Consensus 213 iNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~----------- 281 (405)
T KOG1273|consen 213 INTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSI----------- 281 (405)
T ss_pred EecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCC-----------
Confidence 999999999999874221111 122223321 2344567899999999887777778899999877
Q ss_pred cCCCCceeeeecCCC-cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 229 TNYPAGLFFQHAGHR-DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.++..+.|.. ....++.|+|-.+.++ +.. .|.+++|....
T Consensus 282 ----GsLVKILhG~kgE~l~DV~whp~rp~i~-si~--------sg~v~iw~~~~ 323 (405)
T KOG1273|consen 282 ----GSLVKILHGTKGEELLDVNWHPVRPIIA-SIA--------SGVVYIWAVVQ 323 (405)
T ss_pred ----cceeeeecCCchhheeecccccceeeee-ecc--------CCceEEEEeec
Confidence 55666777766 5788999999777544 332 28999999764
No 166
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.88 E-value=6.6e-23 Score=168.45 Aligned_cols=227 Identities=20% Similarity=0.394 Sum_probs=166.8
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.|.||.. +|+|+.|+..|.+++||+.|..++||.++ +.
T Consensus 184 krLlgH~n-aVyca~fDrtg~~Iitgsdd~lvKiwS~e----------------------------------------t~ 222 (1113)
T KOG0644|consen 184 KRLLGHRN-AVYCAIFDRTGRYIITGSDDRLVKIWSME----------------------------------------TA 222 (1113)
T ss_pred HHHHhhhh-heeeeeeccccceEeecCccceeeeeecc----------------------------------------ch
Confidence 56889999 99999999999999999999999999987 44
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.++..+.||.+.|+.++.+..+ .++++++.|..|++|-+..+. .+..+.+|.+.|++++|+| - .+.+.||++
T Consensus 223 ~~lAs~rGhs~ditdlavs~~n-~~iaaaS~D~vIrvWrl~~~~--pvsvLrghtgavtaiafsP-~----~sss~dgt~ 294 (1113)
T KOG0644|consen 223 RCLASCRGHSGDITDLAVSSNN-TMIAAASNDKVIRVWRLPDGA--PVSVLRGHTGAVTAIAFSP-R----ASSSDDGTC 294 (1113)
T ss_pred hhhccCCCCccccchhccchhh-hhhhhcccCceEEEEecCCCc--hHHHHhccccceeeeccCc-c----ccCCCCCce
Confidence 5667788999999999998877 889999999999999999988 7888899999999999999 3 377889999
Q ss_pred EEEecCC-CCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--------------------------------
Q 021657 162 RMFDRRN-LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG-------------------------------- 208 (309)
Q Consensus 162 ~i~d~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg-------------------------------- 208 (309)
++||.+- +.... ..+. .+. .+..+.++.|..++.. +++++.|+
T Consensus 295 ~~wd~r~~~~~y~-prp~-~~~-~~~~~~s~~~~~~~~~-f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ 370 (1113)
T KOG0644|consen 295 RIWDARLEPRIYV-PRPL-KFT-EKDLVDSILFENNGDR-FLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVT 370 (1113)
T ss_pred EeccccccccccC-CCCC-Ccc-cccceeeeeccccccc-cccccCCcccccchhhHhhhhccceEEEecccccccccee
Confidence 9999882 10000 0000 011 1122333334333332 23444443
Q ss_pred -----cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 209 -----LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 209 -----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
.+++|++.. ..+...+.+|...+..+.++|-++.+..+++.| |...|||+-
T Consensus 371 ar~~~~~~vwnl~~---------------g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~d-------gst~iwdi~-- 426 (1113)
T KOG0644|consen 371 ARNDHRLCVWNLYT---------------GQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYD-------GSTIIWDIW-- 426 (1113)
T ss_pred eeeeeEeeeeeccc---------------chhhhhhcccccceeeeeecCCCcHhhhhccCC-------CceEeeecc--
Confidence 444555444 344556778999999999999999888855555 999999998
Q ss_pred ccCChhhHhHhhhcccceEEEeeeCC
Q 021657 284 IYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 284 ~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+.+++....-.+.+....|++
T Consensus 427 ----eg~pik~y~~gh~kl~d~kFSq 448 (1113)
T KOG0644|consen 427 ----EGIPIKHYFIGHGKLVDGKFSQ 448 (1113)
T ss_pred ----cCCcceeeecccceeeccccCC
Confidence 4555554443345666666654
No 167
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.88 E-value=2e-20 Score=137.89 Aligned_cols=222 Identities=16% Similarity=0.236 Sum_probs=170.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+|+|.+|++|...+|.+-....|.||..... .-.++.+++..|
T Consensus 12 pitchAwn~drt~iAv~~~~~evhiy~~~~~-------------------------------------~~w~~~htls~H 54 (361)
T KOG1523|consen 12 PITCHAWNSDRTQIAVSPNNHEVHIYSMLGA-------------------------------------DLWEPAHTLSEH 54 (361)
T ss_pred ceeeeeecCCCceEEeccCCceEEEEEecCC-------------------------------------CCceeceehhhh
Confidence 8999999999999999999999999998742 114566788899
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEc-CCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
...|+.+.|+|.. +.|++|+.|..-++|.. ..++......+..+....+++.|+| .++.|++|+....|.||-++..
T Consensus 55 d~~vtgvdWap~s-nrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP-~enkFAVgSgar~isVcy~E~E 132 (361)
T KOG1523|consen 55 DKIVTGVDWAPKS-NRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSP-KENKFAVGSGARLISVCYYEQE 132 (361)
T ss_pred CcceeEEeecCCC-CceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecC-cCceEEeccCccEEEEEEEecc
Confidence 9999999999998 77999999999999998 5566666677778899999999999 9999999999999999988764
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc--ccccccCCCCCcCCCC-ceeeeecCCCcce
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVEQGPRTTNYPA-GLFFQHAGHRDKV 246 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v 246 (309)
...-..+ +.-+.+.+.|++++|+|++- |+++|+.|+.+++|..-- -.+.....+.....|. +++.++....+.+
T Consensus 133 NdWWVsK--hikkPirStv~sldWhpnnV-LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwv 209 (361)
T KOG1523|consen 133 NDWWVSK--HIKKPIRSTVTSLDWHPNNV-LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWV 209 (361)
T ss_pred cceehhh--hhCCccccceeeeeccCCcc-eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCce
Confidence 3211111 11233567899999999998 688999999999998533 1122222222222332 2344444667899
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+.|+|+|..|. -.+. |+.+.+=|...
T Consensus 210 h~v~fs~sG~~la-wv~H-------ds~v~~~da~~ 237 (361)
T KOG1523|consen 210 HGVLFSPSGNRLA-WVGH-------DSTVSFVDAAG 237 (361)
T ss_pred eeeEeCCCCCEee-EecC-------CCceEEeecCC
Confidence 9999999988755 3444 48999988874
No 168
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.88 E-value=1.5e-20 Score=154.47 Aligned_cols=219 Identities=23% Similarity=0.387 Sum_probs=160.5
Q ss_pred cceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 10 NAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 10 ~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
++|+|++|+| +..+|+.|..+|+|.+||+..+...... .......
T Consensus 243 s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s----------------------------------~ls~~~~ 288 (555)
T KOG1587|consen 243 SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPS----------------------------------GLSALEV 288 (555)
T ss_pred CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCc----------------------------------ccccccc
Confidence 4799999999 5677889999999999999865332100 0012234
Q ss_pred cccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCcceEEEe----e------ccCCceeEEEeccCCCCeEEEEcC
Q 021657 89 GHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTSPVIKVE----K------AHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~------~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
.|..+++.+.|..+- +.-|++++.||.|..|+++.-..+..... . .....+++++|.+.+.+.|++|+.
T Consensus 289 sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe 368 (555)
T KOG1587|consen 289 SHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTE 368 (555)
T ss_pred cCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcC
Confidence 689999999997643 14489999999999999875443211111 1 122468999999988899999999
Q ss_pred CCcEEEEecCCCCCC--CCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 158 DNSVRMFDRRNLTSN--GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 158 dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+|.|.--+....... -..+.+..+..|.++|+++.++|-+..+|.+++ |.+++||..... ..+
T Consensus 369 ~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~--------------~~P 433 (555)
T KOG1587|consen 369 EGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVI--------------ASP 433 (555)
T ss_pred CcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCC--------------CCc
Confidence 999987443332110 001335566778999999999999988787777 999999998731 234
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
++.+..+...+++++|||..+.+++++..| |.|.+||+....
T Consensus 434 l~~~~~~~~~v~~vaWSptrpavF~~~d~~-------G~l~iWDLl~~~ 475 (555)
T KOG1587|consen 434 LLSLDSSPDYVTDVAWSPTRPAVFATVDGD-------GNLDIWDLLQDD 475 (555)
T ss_pred chhhhhccceeeeeEEcCcCceEEEEEcCC-------Cceehhhhhccc
Confidence 566677778899999999999999966666 999999998543
No 169
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.5e-20 Score=139.73 Aligned_cols=197 Identities=21% Similarity=0.329 Sum_probs=150.3
Q ss_pred CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEec
Q 021657 22 PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCP 101 (309)
Q Consensus 22 ~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 101 (309)
..+|++-..|.|++||.. +++.+..+.++...++.+.|..
T Consensus 41 ~~vav~lSngsv~lyd~~----------------------------------------tg~~l~~fk~~~~~~N~vrf~~ 80 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKG----------------------------------------TGQLLEEFKGPPATTNGVRFIS 80 (376)
T ss_pred eeEEEEecCCeEEEEecc----------------------------------------chhhhheecCCCCcccceEEec
Confidence 458888889999999987 3455677788888999999976
Q ss_pred C-CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC-CceeEEEeccCCCCeEEEEcC----CCcEEEEecCCCCCCCCC
Q 021657 102 S-SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD-ADLHCVDWNPLDDNLILTGSA----DNSVRMFDRRNLTSNGVG 175 (309)
Q Consensus 102 ~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~ 175 (309)
. +++.+.+|+.||+|++||++............+. .+..+++..- ..+.+++|.. +..+.+||+|..+
T Consensus 81 ~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nc-k~~ii~~GtE~~~s~A~v~lwDvR~~q----- 154 (376)
T KOG1188|consen 81 CDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNC-KKNIIACGTELTRSDASVVLWDVRSEQ----- 154 (376)
T ss_pred CCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccC-cCCeEEeccccccCceEEEEEEecccc-----
Confidence 4 5688999999999999999987765555666665 5677777765 6778888753 5689999999842
Q ss_pred Cceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccC
Q 021657 176 SPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS 254 (309)
Q Consensus 176 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 254 (309)
+++.. ...|...|++++|+|..+.+|++|+.||.|.+||+....+. ..+.....|...|..+.|..+
T Consensus 155 q~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~Ee------------DaL~~viN~~sSI~~igw~~~ 222 (376)
T KOG1188|consen 155 QLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEE------------DALLHVINHGSSIHLIGWLSK 222 (376)
T ss_pred chhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcch------------hhHHHhhcccceeeeeeeecC
Confidence 22444 46799999999999999999999999999999999874221 123333457788999999876
Q ss_pred CCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 255 DPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 255 ~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
+=.-+..-+.. .+..+|++++.
T Consensus 223 ~ykrI~clTH~-------Etf~~~ele~~ 244 (376)
T KOG1188|consen 223 KYKRIMCLTHM-------ETFAIYELEDG 244 (376)
T ss_pred CcceEEEEEcc-------CceeEEEccCC
Confidence 62223333333 78999999954
No 170
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.87 E-value=4.5e-21 Score=137.70 Aligned_cols=163 Identities=12% Similarity=0.210 Sum_probs=121.2
Q ss_pred cCCeEEEEEecC-C-CcEEEEEcCCCeEEEEEcCCCCc--------ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 91 EDTVEDVTFCPS-S-AQEFCSVGDDSCLILWDARVGTS--------PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 91 ~~~v~~~~~~~~-~-~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
.+.+.+..+..+ + .-++++|.++|.+.+||+.++.. +.......|..+|.++.|.+ .-..=++|+.+..
T Consensus 150 lgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas-~~~rGisgga~dk 228 (323)
T KOG0322|consen 150 LGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYAS-SCDRGISGGADDK 228 (323)
T ss_pred cCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeech-hhcCCcCCCcccc
Confidence 345666654322 2 23577888999999999998731 13334457889999999988 6666788888888
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+..|.+...... .+...+..-....+..+.+-||++ ++|+++.|+.|+||..++ .+++..+.
T Consensus 229 l~~~Sl~~s~gs--lq~~~e~~lknpGv~gvrIRpD~K-IlATAGWD~RiRVyswrt---------------l~pLAVLk 290 (323)
T KOG0322|consen 229 LVMYSLNHSTGS--LQIRKEITLKNPGVSGVRIRPDGK-ILATAGWDHRIRVYSWRT---------------LNPLAVLK 290 (323)
T ss_pred ceeeeeccccCc--ccccceEEecCCCccceEEccCCc-EEeecccCCcEEEEEecc---------------CCchhhhh
Confidence 999988753210 222223333455688899999999 789999999999999998 56677788
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
-|...|++++|+|+.+ ++|+ ++.|++|.+|++
T Consensus 291 yHsagvn~vAfspd~~-lmAa-------askD~rISLWkL 322 (323)
T KOG0322|consen 291 YHSAGVNAVAFSPDCE-LMAA-------ASKDARISLWKL 322 (323)
T ss_pred hhhcceeEEEeCCCCc-hhhh-------ccCCceEEeeec
Confidence 8999999999999755 5664 445599999987
No 171
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.87 E-value=1.7e-20 Score=151.26 Aligned_cols=244 Identities=11% Similarity=0.154 Sum_probs=167.8
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC-ccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-ATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
|++|+||++ .|+|++|+.||+++|+|+.|+.|.+|+-+-.- ...... ....+...+. ..............+|...
T Consensus 46 lqtLKgHKD-tVycVAys~dGkrFASG~aDK~VI~W~~klEG-~LkYSH~D~IQCMsFNP-~~h~LasCsLsdFglWS~~ 122 (1081)
T KOG1538|consen 46 LQPLKGHKD-TVYCVAYAKDGKRFASGSADKSVIIWTSKLEG-ILKYSHNDAIQCMSFNP-ITHQLASCSLSDFGLWSPE 122 (1081)
T ss_pred ccccccccc-eEEEEEEccCCceeccCCCceeEEEecccccc-eeeeccCCeeeEeecCc-hHHHhhhcchhhccccChh
Confidence 578999999 89999999999999999999999999865320 000000 0000000000 0000011122333445444
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC----CeEEEE
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD----NLILTG 155 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~l~~~ 155 (309)
.....+ .....+|.+++|..|| ++|+.|-.||+|.|-+....+...+....+..++|.+++|+|..+ ..+++.
T Consensus 123 qK~V~K--~kss~R~~~CsWtnDG-qylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~ 199 (1081)
T KOG1538|consen 123 QKSVSK--HKSSSRIICCSWTNDG-QYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVA 199 (1081)
T ss_pred hhhHHh--hhhheeEEEeeecCCC-cEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEE
Confidence 332211 1134578899999999 999999999999999765444333334445778999999999433 477888
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
....++.+|.+. ++.+..-+...-...|+++.++|++++ .|+.|+.+++|-.+. ..
T Consensus 200 DW~qTLSFy~Ls-------G~~Igk~r~L~FdP~CisYf~NGEy~L-iGGsdk~L~~fTR~G----------------vr 255 (1081)
T KOG1538|consen 200 DWGQTLSFYQLS-------GKQIGKDRALNFDPCCISYFTNGEYIL-LGGSDKQLSLFTRDG----------------VR 255 (1081)
T ss_pred eccceeEEEEec-------ceeecccccCCCCchhheeccCCcEEE-EccCCCceEEEeecC----------------eE
Confidence 888888888876 455554444455667999999999876 777799999997654 33
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.+......+|+.++..|+++++. .|+.||+|--|++..
T Consensus 256 LGTvg~~D~WIWtV~~~PNsQ~v~--------~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 256 LGTVGEQDSWIWTVQAKPNSQYVV--------VGCQDGTIACYNLIF 294 (1081)
T ss_pred EeeccccceeEEEEEEccCCceEE--------EEEccCeeehhhhHH
Confidence 445555678999999999998877 677779999999863
No 172
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=3.3e-20 Score=144.00 Aligned_cols=289 Identities=20% Similarity=0.272 Sum_probs=198.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCce-----eecCCCCCCCCcccC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-----IKQSPKPGDGNDKAA 76 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 76 (309)
..|.+|.+ .|..|.|+..|..|++|+.|.+|.+||+........+.........+...+ ..+.....++.+++.
T Consensus 136 ~kL~~H~G-cVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 136 KKLNKHKG-CVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVS 214 (559)
T ss_pred hcccCCCC-ccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeee
Confidence 46889999 999999999999999999999999999998866666655444332222211 112223445555555
Q ss_pred CCCCcC---cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEE-EeeccCC---ceeEEEeccCCC
Q 021657 77 DGPSVG---PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK-VEKAHDA---DLHCVDWNPLDD 149 (309)
Q Consensus 77 ~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~---~v~~~~~~~~~~ 149 (309)
...... ....+..|.++|.-++.-|+.+..|.+++.|+.+.-.|++++...... ....+.. ....++..|.+.
T Consensus 215 ~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt 294 (559)
T KOG1334|consen 215 EILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNT 294 (559)
T ss_pred eeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCc
Confidence 443322 245567899999999999999899999999999999999876532222 2223333 578899999777
Q ss_pred CeEEEEcCCCcEEEEecCCCCCCCCCCceeeec------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFE------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
+.+++|+.|..+++||.+....+.....+..+. .....|++++++.++.-++ +...|-.|+++.-.. +.-..
T Consensus 295 ~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElL-aSYnDe~IYLF~~~~-~~G~~ 372 (559)
T KOG1334|consen 295 NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELL-ASYNDEDIYLFNKSM-GDGSE 372 (559)
T ss_pred cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCcccee-eeecccceEEecccc-ccCCC
Confidence 899999999999999998765432222233332 2345699999998777777 455577889983322 22211
Q ss_pred CCCCCcCCCCcee-eeecCCCc--ceeeEEEc-cCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhccc
Q 021657 224 QGPRTTNYPAGLF-FQHAGHRD--KVVDFHWN-ASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFK 299 (309)
Q Consensus 224 ~~~~~~~~~~~~~-~~~~~~~~--~v~~~~~~-~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~ 299 (309)
. .........+ ..+++|.. .|..+-|- |. ..++++||+- |.|.||+-. +++.+.-+++-.
T Consensus 373 p--~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPr-sEyVvSGSDC-------GhIFiW~K~------t~eii~~MegDr 436 (559)
T KOG1334|consen 373 P--DPSSPREQYVKRVYKGHRNSRTVKGVNFFGPR-SEYVVSGSDC-------GHIFIWDKK------TGEIIRFMEGDR 436 (559)
T ss_pred C--CCCcchhhccchhhcccccccccceeeeccCc-cceEEecCcc-------ceEEEEecc------hhHHHHHhhccc
Confidence 1 1111001111 22677754 57777764 54 4456666555 999999999 899999999988
Q ss_pred ceEEEeeeCC
Q 021657 300 AHVISCTSKP 309 (309)
Q Consensus 300 ~~v~~~~~~P 309 (309)
..|.|+.-||
T Consensus 437 ~VVNCLEpHP 446 (559)
T KOG1334|consen 437 HVVNCLEPHP 446 (559)
T ss_pred ceEeccCCCC
Confidence 8999998887
No 173
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=2.5e-20 Score=132.47 Aligned_cols=213 Identities=21% Similarity=0.337 Sum_probs=145.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.+-+++|.+++|+.|..+|.|-+..+.+........+ ...++-..++|
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~------------------------------gk~~iv~eqah 61 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPP------------------------------GKLKIVPEQAH 61 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCC------------------------------CCcceeecccc
Confidence 467788999999999999999999999975432222111 22233445789
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-----------ceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-----------PVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
.++|+.++|.. .+|++|+ ||.|+-|..+.... +..+.-...-..|++|...| ..+-++.++.|+
T Consensus 62 dgpiy~~~f~d---~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP-~enSi~~AgGD~ 136 (325)
T KOG0649|consen 62 DGPIYYLAFHD---DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDP-SENSILFAGGDG 136 (325)
T ss_pred CCCeeeeeeeh---hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEecc-CCCcEEEecCCe
Confidence 99999999983 4577765 49999998765331 01111111224689999999 555555566899
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.++-||+++ ++..+++++|...|.++.-......+| +|++||++++||.++.+......+... -..+
T Consensus 137 ~~y~~dlE~------G~i~r~~rGHtDYvH~vv~R~~~~qil-sG~EDGtvRvWd~kt~k~v~~ie~yk~------~~~l 203 (325)
T KOG0649|consen 137 VIYQVDLED------GRIQREYRGHTDYVHSVVGRNANGQIL-SGAEDGTVRVWDTKTQKHVSMIEPYKN------PNLL 203 (325)
T ss_pred EEEEEEecC------CEEEEEEcCCcceeeeeeecccCccee-ecCCCccEEEEeccccceeEEeccccC------hhhc
Confidence 999999999 999999999999999999844444455 999999999999998443322111111 0011
Q ss_pred cCC-CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 240 AGH-RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 240 ~~~-~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..| ..+|-+++-+ ..+++. |....+.+|+++.
T Consensus 204 Rp~~g~wigala~~--edWlvC---------GgGp~lslwhLrs 236 (325)
T KOG0649|consen 204 RPDWGKWIGALAVN--EDWLVC---------GGGPKLSLWHLRS 236 (325)
T ss_pred CcccCceeEEEecc--CceEEe---------cCCCceeEEeccC
Confidence 222 2356666655 446553 3336899999993
No 174
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.86 E-value=7.1e-21 Score=152.57 Aligned_cols=213 Identities=15% Similarity=0.286 Sum_probs=157.0
Q ss_pred CcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 9 DNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 9 ~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
+..|+.+.|+| |...||.++.||.|++|.+..+-.. .....+...+
T Consensus 627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~---------------------------------e~~~tPe~~l 673 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLP---------------------------------ENEMTPEKIL 673 (1012)
T ss_pred CceeeecccCCCChHHeeecccCceEEEEEeccCCCC---------------------------------cccCCcceee
Confidence 34699999999 7789999999999999999753111 1233456678
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
..|...|+++.|+|--...|++++.|-+|++||+.+.+ ....+.+|.+.|..++|+| +|+.+++.+.||+|++|+.+
T Consensus 674 t~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~--~~~~l~gHtdqIf~~AWSp-dGr~~AtVcKDg~~rVy~Pr 750 (1012)
T KOG1445|consen 674 TIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAK--LYSRLVGHTDQIFGIAWSP-DGRRIATVCKDGTLRVYEPR 750 (1012)
T ss_pred ecccceEEEEEecchhhhHhhhhhccceeeeeehhhhh--hhheeccCcCceeEEEECC-CCcceeeeecCceEEEeCCC
Confidence 89999999999999877899999999999999999988 6778889999999999999 99999999999999999998
Q ss_pred CCCCCCCCCceeeeccCC-CCeeEEEEecCCCcEEEEecC---CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC-
Q 021657 168 NLTSNGVGSPINKFEGHS-AAVLCVQWSPDKSSVFGSSAE---DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH- 242 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (309)
.. .+++++-.+.. ..-..|.|.-+|++++++|-+ ..+|.+||..+..- ..++...-.
T Consensus 751 s~-----e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~-------------~pl~t~~lDv 812 (1012)
T KOG1445|consen 751 SR-----EQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDL-------------RPLYTQVLDV 812 (1012)
T ss_pred CC-----CCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccC-------------Ccceeeeecc
Confidence 74 34454443322 223468899999987766642 35688888766220 111111100
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...+.--.+.+|.+.+++ ||-.|..|.+|.+-.
T Consensus 813 aps~LvP~YD~Ds~~lfl-------tGKGD~~v~~yEv~~ 845 (1012)
T KOG1445|consen 813 APSPLVPHYDYDSNVLFL-------TGKGDRFVNMYEVIY 845 (1012)
T ss_pred cCccccccccCCCceEEE-------ecCCCceEEEEEecC
Confidence 001111234566677777 555669999999863
No 175
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=2.6e-20 Score=142.04 Aligned_cols=202 Identities=16% Similarity=0.259 Sum_probs=146.6
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
.+++|+++|..|++|+.||++|||++.+ ...+.....|.+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps----------------------------------------~~t~l~e~~~~~ 187 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPS----------------------------------------MLTILEEIAHHA 187 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCc----------------------------------------chhhhhhHhhcC
Confidence 5899999999999999999999999763 333445567899
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC-----CeEEEEcCCCcEEEEecC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-----NLILTGSADNSVRMFDRR 167 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~l~~~~~dg~i~i~d~~ 167 (309)
.|.++.|+||| .+|++-+.| ..+||+++++...........+.....+.|+. ++ ..++.....+.|+.||+.
T Consensus 188 eV~DL~FS~dg-k~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~-d~~~~~l~laa~~~~~~~v~~~~~~ 264 (398)
T KOG0771|consen 188 EVKDLDFSPDG-KFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSV-DNAQETLRLAASQFPGGGVRLCDIS 264 (398)
T ss_pred ccccceeCCCC-cEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecc-cCCCceEEEEEecCCCCceeEEEee
Confidence 99999999999 889999999 89999999885222222233345567778876 54 233334445678888776
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
........ +.++.......|++++.+++|++ +|.|+.||.|.|++...... ..+.-..|...|+
T Consensus 265 ~w~~~~~l-~~~~~~~~~~siSsl~VS~dGkf-~AlGT~dGsVai~~~~~lq~--------------~~~vk~aH~~~VT 328 (398)
T KOG0771|consen 265 LWSGSNFL-RLRKKIKRFKSISSLAVSDDGKF-LALGTMDGSVAIYDAKSLQR--------------LQYVKEAHLGFVT 328 (398)
T ss_pred eecccccc-chhhhhhccCcceeEEEcCCCcE-EEEeccCCcEEEEEeceeee--------------eEeehhhheeeee
Confidence 53211001 12222223457999999999995 78999999999999987222 2344567999999
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+.|+|+.+++. +.+.|....|..+.
T Consensus 329 ~ltF~Pdsr~~~--------svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 329 GLTFSPDSRYLA--------SVSSDNEAAVTKLA 354 (398)
T ss_pred eEEEcCCcCccc--------ccccCCceeEEEEe
Confidence 999999888766 44444788888776
No 176
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=9.3e-20 Score=146.71 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=176.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccc--cCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKS--AGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
..+.||++..|-+++|+ ++.+|++.+.+|.|.-||+.+.............. ............+..++.+......
T Consensus 62 ~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~ 140 (691)
T KOG2048|consen 62 PVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIG 140 (691)
T ss_pred EEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecC
Confidence 35788988899999999 56679999999999999999875444333322211 1111111222223344444444444
Q ss_pred CcC--cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe-----e-ccCCceeEEEeccCCCCe
Q 021657 80 SVG--PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-----K-AHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 80 ~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~-~~~~~v~~~~~~~~~~~~ 151 (309)
... ....+...+++|.++.|+|++ ..+++|+.||.|++||+.++....+... . ....-|+++.|-. ...
T Consensus 141 p~~I~~~r~l~rq~sRvLslsw~~~~-~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr--d~t 217 (691)
T KOG2048|consen 141 PDKITYKRSLMRQKSRVLSLSWNPTG-TKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR--DST 217 (691)
T ss_pred CceEEEEeecccccceEEEEEecCCc-cEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee--cCc
Confidence 333 334455567899999999999 7799999999999999988873221111 1 1233577888775 678
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
+++|...|+|.+||... +..++.+..|...|.+++..+++.+++ +++.|+.|..|.....+..
T Consensus 218 I~sgDS~G~V~FWd~~~------gTLiqS~~~h~adVl~Lav~~~~d~vf-saGvd~~ii~~~~~~~~~~---------- 280 (691)
T KOG2048|consen 218 IASGDSAGTVTFWDSIF------GTLIQSHSCHDADVLALAVADNEDRVF-SAGVDPKIIQYSLTTNKSE---------- 280 (691)
T ss_pred EEEecCCceEEEEcccC------cchhhhhhhhhcceeEEEEcCCCCeEE-EccCCCceEEEEecCCccc----------
Confidence 99999999999999999 999999999999999999999988765 8889999988887763331
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.........|...|.+++..++ .++ +||.|..+.+-....
T Consensus 281 -wv~~~~r~~h~hdvrs~av~~~--~l~--------sgG~d~~l~i~~s~~ 320 (691)
T KOG2048|consen 281 -WVINSRRDLHAHDVRSMAVIEN--ALI--------SGGRDFTLAICSSRE 320 (691)
T ss_pred -eeeeccccCCcccceeeeeecc--eEE--------ecceeeEEEEccccc
Confidence 1122344668888999998875 344 566667777766653
No 177
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.86 E-value=1.1e-20 Score=142.94 Aligned_cols=172 Identities=19% Similarity=0.360 Sum_probs=141.0
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-----ceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-----PVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
-.+.+|+++|.++.|+|.+.+.+|+|++|.+|.||++..+.. ..+..+.+|...|--++|+|.-.+.|++++.|.
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 346799999999999999889999999999999999865431 246678899999999999998889999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
+|.+|++.+ ++.+.++. |...|.+++|+.||.. +++.+.|..|+|||.+. ...+...
T Consensus 155 ~v~iWnv~t------geali~l~-hpd~i~S~sfn~dGs~-l~TtckDKkvRv~dpr~---------------~~~v~e~ 211 (472)
T KOG0303|consen 155 TVSIWNVGT------GEALITLD-HPDMVYSMSFNRDGSL-LCTTCKDKKVRVIDPRR---------------GTVVSEG 211 (472)
T ss_pred eEEEEeccC------CceeeecC-CCCeEEEEEeccCCce-eeeecccceeEEEcCCC---------------CcEeeec
Confidence 999999999 88888888 9999999999999995 78999999999999998 3334444
Q ss_pred cCCCc-ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 240 AGHRD-KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 240 ~~~~~-~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
.+|.+ .-..+.|-.++. +++.+. +--.+..+-+||..++.
T Consensus 212 ~~heG~k~~Raifl~~g~--i~tTGf---sr~seRq~aLwdp~nl~ 252 (472)
T KOG0303|consen 212 VAHEGAKPARAIFLASGK--IFTTGF---SRMSERQIALWDPNNLE 252 (472)
T ss_pred ccccCCCcceeEEeccCc--eeeecc---ccccccceeccCccccc
Confidence 55654 334555666565 444443 55678999999988653
No 178
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.86 E-value=9.7e-19 Score=145.46 Aligned_cols=264 Identities=25% Similarity=0.482 Sum_probs=194.8
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccc-cccccCC-----cccccc-CCCCceeecCCCCCCCCccc
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI-TSSATDP-----ATAKSA-GSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~-~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~ 75 (309)
.+.+|.. .|.++.+.+.+..++.++.|+.+.+|+..... ....... ...... ..............++.+.+
T Consensus 60 ~~~~~~~-~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 138 (466)
T COG2319 60 LLRGHED-SITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKL 138 (466)
T ss_pred eeeeccc-eEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEE
Confidence 3567887 89999999999999999999999999998774 2221111 111111 11122233333444778889
Q ss_pred CCCCC-cCcccccccccCCeEEEEEecCCCcEEEEEcC-CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCC-eE
Q 021657 76 ADGPS-VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN-LI 152 (309)
Q Consensus 76 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l 152 (309)
|+... ......+..|...|..+.|+|++ ..+++++. |+.+++|++.... ....+..|...+.+++|+| ++. .+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~~ 214 (466)
T COG2319 139 WDLSTPGKLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIKLWDLRTGK--PLSTLAGHTDPVSSLAFSP-DGGLLI 214 (466)
T ss_pred EEecCCCeEEEEEecCcccEEEEEECCCC-CEEEecCCCCCceEEEEcCCCc--eEEeeccCCCceEEEEEcC-CcceEE
Confidence 98887 77788889999999999999998 57777775 9999999998755 6777777999999999998 777 55
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCcee-eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPIN-KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
++++.|+.|++||... +..+. .+..|.... ...|+|++. ++++++.|+.+++|+++....
T Consensus 215 ~~~~~d~~i~~wd~~~------~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~----------- 275 (466)
T COG2319 215 ASGSSDGTIRLWDLST------GKLLRSTLSGHSDSV-VSSFSPDGS-LLASGSSDGTIRLWDLRSSSS----------- 275 (466)
T ss_pred EEecCCCcEEEEECCC------CcEEeeecCCCCcce-eEeECCCCC-EEEEecCCCcEEEeeecCCCc-----------
Confidence 5558999999998886 66776 677777765 348999996 456999999999999987332
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh--hcccceEEEeee
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL--EKFKAHVISCTS 307 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~ 307 (309)
.+....+|...+.++.|+|++..+++ ++. |+.+.+|++.. ....... ..|...+..+.|
T Consensus 276 ---~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~-------d~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 336 (466)
T COG2319 276 ---LLRTLSGHSSSVLSVAFSPDGKLLAS-GSS-------DGTVRLWDLET------GKLLSSLTLKGHEGPVSSLSF 336 (466)
T ss_pred ---EEEEEecCCccEEEEEECCCCCEEEE-eeC-------CCcEEEEEcCC------CceEEEeeecccCCceEEEEE
Confidence 12222678899999999997777663 444 47899998873 3322333 366666776665
No 179
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.86 E-value=1.1e-20 Score=139.68 Aligned_cols=218 Identities=22% Similarity=0.389 Sum_probs=155.8
Q ss_pred cccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+.+.||.+ +|+.+.++|+ .++++++|.|..||+|++++..+...+.
T Consensus 129 ~~~~ghG~-sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfG-------------------------------- 175 (385)
T KOG1034|consen 129 KNYRGHGG-SINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFG-------------------------------- 175 (385)
T ss_pred cceeccCc-cchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEec--------------------------------
Confidence 45789998 8999999996 4788999999999999999765443332
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc--------------------------ceEEEeec
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--------------------------PVIKVEKA 134 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------------------~~~~~~~~ 134 (309)
-+.+|...|.++.|+++| .+|++|+.|.+|++|++...+. +...+..-
T Consensus 176 -----G~egHrdeVLSvD~~~~g-d~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~di 249 (385)
T KOG1034|consen 176 -----GVEGHRDEVLSVDFSLDG-DRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDI 249 (385)
T ss_pred -----ccccccCcEEEEEEcCCC-CeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccccccc
Confidence 256899999999999999 6899999999999999973210 01112345
Q ss_pred cCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC--------CCCCCceeeeccCCCCeeEE--EEecCCCcEEEEe
Q 021657 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS--------NGVGSPINKFEGHSAAVLCV--QWSPDKSSVFGSS 204 (309)
Q Consensus 135 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~ 204 (309)
|...|.|+.| -++++++-+.++.|..|....... +.....+.++......|.-| +|.|-++. ||.|
T Consensus 250 HrnyVDCvrw---~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~-la~g 325 (385)
T KOG1034|consen 250 HRNYVDCVRW---FGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKM-LALG 325 (385)
T ss_pred ccchHHHHHH---HhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHH-Hhhc
Confidence 7778888888 468999999999999998732211 11122334444444444444 45676774 6899
Q ss_pred cCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 205 AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 205 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...|.+.+||++...++.. .-....-....|...+|+.++..+++.+. |++|.-||..
T Consensus 326 nq~g~v~vwdL~~~ep~~~-----------ttl~~s~~~~tVRQ~sfS~dgs~lv~vcd--------d~~Vwrwdrv 383 (385)
T KOG1034|consen 326 NQSGKVYVWDLDNNEPPKC-----------TTLTHSKSGSTVRQTSFSRDGSILVLVCD--------DGTVWRWDRV 383 (385)
T ss_pred cCCCcEEEEECCCCCCccC-----------ceEEeccccceeeeeeecccCcEEEEEeC--------CCcEEEEEee
Confidence 9999999999998443211 11122223467999999999987775443 3899888864
No 180
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=1.2e-19 Score=150.76 Aligned_cols=180 Identities=19% Similarity=0.355 Sum_probs=145.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
++++++|+-+|+++|.||.|-.|++-++.+ ......+++|
T Consensus 98 p~r~~~v~g~g~~iaagsdD~~vK~~~~~D----------------------------------------~s~~~~lrgh 137 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDTAVKLLNLDD----------------------------------------SSQEKVLRGH 137 (933)
T ss_pred cceEEEEecCCcEEEeecCceeEEEEeccc----------------------------------------cchheeeccc
Confidence 789999999999999999999999999874 2335678899
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-------c-CCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-------H-DADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~-~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.++|.++.|+|.+ .+||+.+-||.|++||+.++. ....+.+ . ...+..++|+| .+..|+....|+.|.
T Consensus 138 ~apVl~l~~~p~~-~fLAvss~dG~v~iw~~~~~~--~~~tl~~v~k~n~~~~s~i~~~~aW~P-k~g~la~~~~d~~Vk 213 (933)
T KOG1274|consen 138 DAPVLQLSYDPKG-NFLAVSSCDGKVQIWDLQDGI--LSKTLTGVDKDNEFILSRICTRLAWHP-KGGTLAVPPVDNTVK 213 (933)
T ss_pred CCceeeeeEcCCC-CEEEEEecCceEEEEEcccch--hhhhcccCCccccccccceeeeeeecC-CCCeEEeeccCCeEE
Confidence 9999999999999 899999999999999998776 2222211 1 35677899999 777777778899999
Q ss_pred EEecCCCCCCCCCCceeeecc--CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 163 MFDRRNLTSNGVGSPINKFEG--HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+|+... +.....+.. +...+..++|+|+|.| +|+++.||.|.|||..+.. ..
T Consensus 214 vy~r~~------we~~f~Lr~~~~ss~~~~~~wsPnG~Y-iAAs~~~g~I~vWnv~t~~-------------------~~ 267 (933)
T KOG1274|consen 214 VYSRKG------WELQFKLRDKLSSSKFSDLQWSPNGKY-IAASTLDGQILVWNVDTHE-------------------RH 267 (933)
T ss_pred EEccCC------ceeheeecccccccceEEEEEcCCCcE-EeeeccCCcEEEEecccch-------------------hc
Confidence 999988 777666643 3445899999999998 6899999999999998710 02
Q ss_pred CCCcceeeEEEccCCCeEEE
Q 021657 241 GHRDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~ 260 (309)
.....|++++|.|+.+.+-+
T Consensus 268 ~~~~~Vc~~aw~p~~n~it~ 287 (933)
T KOG1274|consen 268 EFKRAVCCEAWKPNANAITL 287 (933)
T ss_pred cccceeEEEecCCCCCeeEE
Confidence 23457999999998875443
No 181
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.85 E-value=9.7e-20 Score=143.26 Aligned_cols=226 Identities=14% Similarity=0.267 Sum_probs=153.0
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCC---------CceeecCCCCCCCCcccC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSS---------GSIIKQSPKPGDGNDKAA 76 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 76 (309)
.|.. .|.|+.|+.+...+.+++.+-.+.-||+.+........+......... .....+...++++.+.+.
T Consensus 12 r~~e-~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSE-KVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccce-eEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 4666 688999998887777777666666666655432222222221111111 000111111222222222
Q ss_pred CCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 77 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
. ..++....+..|.+.+.+-.|+|+| .-|+++++||.|++|.- ++. ....+.....+|+|++|.|++.+.+++.+
T Consensus 91 ~-k~~rVE~sv~AH~~A~~~gRW~~dG-tgLlt~GEDG~iKiWSr-sGM--LRStl~Q~~~~v~c~~W~p~S~~vl~c~g 165 (737)
T KOG1524|consen 91 N-KSARVERSISAHAAAISSGRWSPDG-AGLLTAGEDGVIKIWSR-SGM--LRSTVVQNEESIRCARWAPNSNSIVFCQG 165 (737)
T ss_pred c-ccchhhhhhhhhhhhhhhcccCCCC-ceeeeecCCceEEEEec-cch--HHHHHhhcCceeEEEEECCCCCceEEecC
Confidence 1 2334456678899999999999999 77999999999999985 455 34445556789999999995555555543
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
+.+.|=-+.. ...+...+.|.+-|.++.|++... ++++|++|-..+|||-.. +.+
T Consensus 166 --~h~~IKpL~~------n~k~i~WkAHDGiiL~~~W~~~s~-lI~sgGED~kfKvWD~~G----------------~~L 220 (737)
T KOG1524|consen 166 --GHISIKPLAA------NSKIIRWRAHDGLVLSLSWSTQSN-IIASGGEDFRFKIWDAQG----------------ANL 220 (737)
T ss_pred --CeEEEeeccc------ccceeEEeccCcEEEEeecCcccc-ceeecCCceeEEeecccC----------------ccc
Confidence 4566655655 556677889999999999999998 678999999999999764 456
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecC
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 264 (309)
+....|..+|++++|+|+. +++.+|.
T Consensus 221 f~S~~~ey~ITSva~npd~--~~~v~S~ 246 (737)
T KOG1524|consen 221 FTSAAEEYAITSVAFNPEK--DYLLWSY 246 (737)
T ss_pred ccCChhccceeeeeecccc--ceeeeee
Confidence 7778899999999999973 4444443
No 182
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.85 E-value=1.7e-19 Score=133.58 Aligned_cols=221 Identities=20% Similarity=0.341 Sum_probs=161.4
Q ss_pred ccCCCCCcceEEEEECC----C-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCC
Q 021657 3 ILTGHQDNAEFALAMCP----T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~----~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
...+|+. +|..++|++ + -..++|.+. ..+.+|........
T Consensus 33 l~ed~~~-~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~i--------------------------------- 77 (385)
T KOG1034|consen 33 LKEDHNK-PIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGI--------------------------------- 77 (385)
T ss_pred hhccCCC-ccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccce---------------------------------
Confidence 4567877 899999985 2 245666665 47888887642100
Q ss_pred CCCcCccccc--ccccCCeEEEEEecC---CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE
Q 021657 78 GPSVGPRGIY--NGHEDTVEDVTFCPS---SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI 152 (309)
Q Consensus 78 ~~~~~~~~~~--~~~~~~v~~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 152 (309)
+.++.. ..|......++|+-+ +.-++|.|+.-|.|+|.|+.+++ ....+.+|...|+.+.++|...+++
T Consensus 78 ----r~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~--~~~~~~ghG~sINeik~~p~~~qlv 151 (385)
T KOG1034|consen 78 ----RLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQ--CSKNYRGHGGSINEIKFHPDRPQLV 151 (385)
T ss_pred ----eeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhh--hccceeccCccchhhhcCCCCCcEE
Confidence 011111 136667778888643 34678999999999999999988 7888999999999999999888999
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCceeee---ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc--cccccCC--
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPINKF---EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV--GKKVEQG-- 225 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~--~~~~~~~-- 225 (309)
++++.|..||+|++++ ..++..| .+|...|.++.|+++|.+ +++++.|.++++|++... ...++..
T Consensus 152 ls~SkD~svRlwnI~~------~~Cv~VfGG~egHrdeVLSvD~~~~gd~-i~ScGmDhslk~W~l~~~~f~~~lE~s~~ 224 (385)
T KOG1034|consen 152 LSASKDHSVRLWNIQT------DVCVAVFGGVEGHRDEVLSVDFSLDGDR-IASCGMDHSLKLWRLNVKEFKNKLELSIT 224 (385)
T ss_pred EEecCCceEEEEeccC------CeEEEEecccccccCcEEEEEEcCCCCe-eeccCCcceEEEEecChhHHhhhhhhhcc
Confidence 9999999999999999 7888777 568999999999999997 679999999999999842 2111111
Q ss_pred --CCCc--CCC--Cc--e-eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 226 --PRTT--NYP--AG--L-FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 226 --~~~~--~~~--~~--~-~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+... +.| .. + +.+-.-|..+|-++.|- +++++ |-+.++.|..|..-
T Consensus 225 ~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~il--------SkscenaI~~w~pg 279 (385)
T KOG1034|consen 225 YSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFIL--------SKSCENAIVCWKPG 279 (385)
T ss_pred cCCCCccCcCCccccccccccccccccchHHHHHHH--hhhee--------ecccCceEEEEecc
Confidence 0000 011 11 1 12445688899999887 45555 55666899999983
No 183
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.84 E-value=6.4e-20 Score=145.88 Aligned_cols=207 Identities=19% Similarity=0.326 Sum_probs=164.2
Q ss_pred CCCCcceEEEEECCCCCEEEEecCC---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.|.. .|..+.|+..|.||+|...+ ..|.|.++.....
T Consensus 519 ~~~k-~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~s--------------------------------------- 558 (733)
T KOG0650|consen 519 KHPK-SIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKS--------------------------------------- 558 (733)
T ss_pred ecCC-ccceeeeecCCceEEEeccCCCcceEEEEecccccc---------------------------------------
Confidence 4666 79999999999999987653 5688888874321
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
...|....+.|.++.|+|.. .+|+.++. ..|+|||+..+. .++.+......|.+|+.+| .|.-|+.|+.|+.+.
T Consensus 559 -Q~PF~kskG~vq~v~FHPs~-p~lfVaTq-~~vRiYdL~kqe--lvKkL~tg~kwiS~msihp-~GDnli~gs~d~k~~ 632 (733)
T KOG0650|consen 559 -QSPFRKSKGLVQRVKFHPSK-PYLFVATQ-RSVRIYDLSKQE--LVKKLLTGSKWISSMSIHP-NGDNLILGSYDKKMC 632 (733)
T ss_pred -cCchhhcCCceeEEEecCCC-ceEEEEec-cceEEEehhHHH--HHHHHhcCCeeeeeeeecC-CCCeEEEecCCCeeE
Confidence 22344456789999999998 45555544 579999998766 5666666677899999999 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
.||+.-. .++.+++..|...+++++|++.-. ||++|+.||.+.||--.-.....+ +...-++..+.+|
T Consensus 633 WfDldls-----skPyk~lr~H~~avr~Va~H~ryP-Lfas~sdDgtv~Vfhg~VY~Dl~q------npliVPlK~L~gH 700 (733)
T KOG0650|consen 633 WFDLDLS-----SKPYKTLRLHEKAVRSVAFHKRYP-LFASGSDDGTVIVFHGMVYNDLLQ------NPLIVPLKRLRGH 700 (733)
T ss_pred EEEcccC-----cchhHHhhhhhhhhhhhhhccccc-eeeeecCCCcEEEEeeeeehhhhc------CCceEeeeeccCc
Confidence 9999864 578889999999999999999888 799999999999986544332222 1223456677888
Q ss_pred Ccc----eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEE
Q 021657 243 RDK----VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIW 278 (309)
Q Consensus 243 ~~~----v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw 278 (309)
... |..+.|+|..++|+ |+|.||+|++|
T Consensus 701 ~~~~~~gVLd~~wHP~qpWLf--------sAGAd~tirlf 732 (733)
T KOG0650|consen 701 EKTNDLGVLDTIWHPRQPWLF--------SAGADGTIRLF 732 (733)
T ss_pred eeecccceEeecccCCCceEE--------ecCCCceEEee
Confidence 765 99999999999999 88888999998
No 184
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.1e-18 Score=147.57 Aligned_cols=264 Identities=17% Similarity=0.227 Sum_probs=178.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCC-------CCceeecCCCCCCCCcccCCCCCcC-
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGS-------SGSIIKQSPKPGDGNDKAADGPSVG- 82 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (309)
+-..+.|+|-...++++...-.|+|||.+.+.....+.......... .........+..++.+++|+.....
T Consensus 1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence 44678999999999999988899999999886666555544332211 1222234445678889998754331
Q ss_pred ----cccccc-------cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE-eeccCCceeEEEeccCCCC
Q 021657 83 ----PRGIYN-------GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV-EKAHDADLHCVDWNPLDDN 150 (309)
Q Consensus 83 ----~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 150 (309)
.+..+. +-.+.-.-+.|.... .+|+++|+-..|+|||..... .... ..+....|+++.-+-..++
T Consensus 1146 ~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~-G~Ll~tGd~r~IRIWDa~~E~--~~~diP~~s~t~vTaLS~~~~~gn 1222 (1387)
T KOG1517|consen 1146 KKPELVTAWSSLSDQLPGARGTGLVVDWQQQS-GHLLVTGDVRSIRIWDAHKEQ--VVADIPYGSSTLVTALSADLVHGN 1222 (1387)
T ss_pred CCceeEEeeccccccCccCCCCCeeeehhhhC-CeEEecCCeeEEEEEecccce--eEeecccCCCccceeecccccCCc
Confidence 121111 111111335677666 345555668899999997666 3333 3345567888876654789
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCC--eeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA--VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
.+++|..||.|++||.|.... ...+...+.|... |..+.+.+.|-.-+++|+.||.|++||++.. ...
T Consensus 1223 ~i~AGfaDGsvRvyD~R~a~~---ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~-~~e------ 1292 (1387)
T KOG1517|consen 1223 IIAAGFADGSVRVYDRRMAPP---DSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS-SKE------ 1292 (1387)
T ss_pred eEEEeecCCceEEeecccCCc---cccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccC-ccc------
Confidence 999999999999999998543 3467777778776 9999999877654679999999999999983 111
Q ss_pred cCCCCceeeeecCCC---cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc-------c
Q 021657 229 TNYPAGLFFQHAGHR---DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK-------F 298 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-------h 298 (309)
.......|. +.++++..+++.+.++ +|+. +.|+||++. ++.+..++. -
T Consensus 1293 ------~~~~iv~~~~yGs~lTal~VH~hapiiA--------sGs~-q~ikIy~~~-------G~~l~~~k~n~~F~~q~ 1350 (1387)
T KOG1517|consen 1293 ------TFLTIVAHWEYGSALTALTVHEHAPIIA--------SGSA-QLIKIYSLS-------GEQLNIIKYNPGFMGQR 1350 (1387)
T ss_pred ------ccceeeeccccCccceeeeeccCCCeee--------ecCc-ceEEEEecC-------hhhhcccccCcccccCc
Confidence 112222222 3589999999887544 5555 899999997 444444332 2
Q ss_pred cceEEEeeeCC
Q 021657 299 KAHVISCTSKP 309 (309)
Q Consensus 299 ~~~v~~~~~~P 309 (309)
.+.+.+++|||
T Consensus 1351 ~gs~scL~FHP 1361 (1387)
T KOG1517|consen 1351 IGSVSCLAFHP 1361 (1387)
T ss_pred CCCcceeeecc
Confidence 35789999998
No 185
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=2.8e-19 Score=147.51 Aligned_cols=223 Identities=14% Similarity=0.145 Sum_probs=143.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCC---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.+..|.. .|...+|+|||+.|+..+.+ ..|++||+.++..
T Consensus 197 ~~lt~~~~-~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~----------------------------------- 240 (429)
T PRK01742 197 FIVNRSSQ-PLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGAR----------------------------------- 240 (429)
T ss_pred eEeccCCC-ccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCce-----------------------------------
Confidence 34566776 78999999999999887654 3699999875311
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEE--EcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE-
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW--DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG- 155 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~- 155 (309)
+.+..+.+| ...++|+|+|..++++.+.+|.+.|| |+.+++ ...+..+...+....|+| +++.|+..
T Consensus 241 ---~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSp-DG~~i~f~s 310 (429)
T PRK01742 241 ---KVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT---PSQLTSGAGNNTEPSWSP-DGQSILFTS 310 (429)
T ss_pred ---EEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCCC---eEeeccCCCCcCCEEECC-CCCEEEEEE
Confidence 111222233 33579999994444445578876655 555544 344455667788999999 88866654
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
..+|...+|++... +.....+ .+.. ...+|+|+|++++ ..+.++ +.+||+... +.. .
T Consensus 311 ~~~g~~~I~~~~~~-----~~~~~~l-~~~~--~~~~~SpDG~~ia-~~~~~~-i~~~Dl~~g-~~~------------~ 367 (429)
T PRK01742 311 DRSGSPQVYRMSAS-----GGGASLV-GGRG--YSAQISADGKTLV-MINGDN-VVKQDLTSG-STE------------V 367 (429)
T ss_pred CCCCCceEEEEECC-----CCCeEEe-cCCC--CCccCCCCCCEEE-EEcCCC-EEEEECCCC-CeE------------E
Confidence 46788889987652 2222223 2333 4578999999754 455454 566898762 110 0
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+ ...+ ....+.|+|++..++.+. . ++...+|.+... .+..++.+..|.+.+...+|+|
T Consensus 368 l--t~~~--~~~~~~~sPdG~~i~~~s-~-------~g~~~~l~~~~~----~G~~~~~l~~~~g~~~~p~wsp 425 (429)
T PRK01742 368 L--SSTF--LDESPSISPNGIMIIYSS-T-------QGLGKVLQLVSA----DGRFKARLPGSDGQVKFPAWSP 425 (429)
T ss_pred e--cCCC--CCCCceECCCCCEEEEEE-c-------CCCceEEEEEEC----CCCceEEccCCCCCCCCcccCC
Confidence 1 0111 234678999988766433 2 367777776421 4667788888888899999998
No 186
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.83 E-value=1.8e-19 Score=136.82 Aligned_cols=250 Identities=16% Similarity=0.268 Sum_probs=167.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
..|..|+. +|+++.|+|+|++||+|+.+|.|.+|....- ... .. +. -.-.+.+..
T Consensus 59 s~Ls~H~~-aVN~vRf~p~gelLASg~D~g~v~lWk~~~~-~~~--~~--------------------d~-e~~~~ke~w 113 (434)
T KOG1009|consen 59 SSLSRHTR-AVNVVRFSPDGELLASGGDGGEVFLWKQGDV-RIF--DA--------------------DT-EADLNKEKW 113 (434)
T ss_pred ecccCCcc-eeEEEEEcCCcCeeeecCCCceEEEEEecCc-CCc--cc--------------------cc-hhhhCccce
Confidence 46888999 9999999999999999999999999987631 000 00 00 000001123
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
...+.+.+|...|..++|+|++ .++++++.|..+++||+..+. ....+..|...+..++|.| ..+++++-+.|...
T Consensus 114 ~v~k~lr~h~~diydL~Ws~d~-~~l~s~s~dns~~l~Dv~~G~--l~~~~~dh~~yvqgvawDp-l~qyv~s~s~dr~~ 189 (434)
T KOG1009|consen 114 VVKKVLRGHRDDIYDLAWSPDS-NFLVSGSVDNSVRLWDVHAGQ--LLAILDDHEHYVQGVAWDP-LNQYVASKSSDRHP 189 (434)
T ss_pred EEEEEecccccchhhhhccCCC-ceeeeeeccceEEEEEeccce--eEeeccccccccceeecch-hhhhhhhhccCccc
Confidence 3456678899999999999999 899999999999999999999 7888899999999999999 89999999999877
Q ss_pred EEEecCCCCCC---------------CCCCceeeec--cCCCCeeEEEEecCCCcEEEEecC----C-----CcEEEEeC
Q 021657 162 RMFDRRNLTSN---------------GVGSPINKFE--GHSAAVLCVQWSPDKSSVFGSSAE----D-----GLLNIWDY 215 (309)
Q Consensus 162 ~i~d~~~~~~~---------------~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~----d-----g~i~iwd~ 215 (309)
+.+++...+.. ..++..+-+. ..+.....++|+|+|.. +++... . +..++|+-
T Consensus 190 ~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~l-lvtPag~~~~g~~~~~n~tYvfsr 268 (434)
T KOG1009|consen 190 EGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSL-LVTPAGLFKVGGGVFRNTSYVFSR 268 (434)
T ss_pred ceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcE-EEcccceeeeCCceeeceeEeecc
Confidence 77776542100 0011111110 11233567889999984 445431 1 22344443
Q ss_pred CcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccC-----------------CCeEEEEecCCCCCCCCCCeEEEE
Q 021657 216 EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS-----------------DPWTVVSVSDDCDSTGGGGTLQIW 278 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~~~~s~s~d~~s~~~dg~v~vw 278 (309)
+.. .+++..+.+...+...+.++|- ...+++.+.. +.|+||
T Consensus 269 k~l--------------~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~--------~svyvy 326 (434)
T KOG1009|consen 269 KDL--------------KRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK--------NSVYVY 326 (434)
T ss_pred ccc--------------cCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeec--------ceEEEe
Confidence 332 2233444444555555555541 2234555555 489999
Q ss_pred EccccccCChhhHhHhhh-cccceEEEeeeCC
Q 021657 279 RMSDLIYRPQDEVLAELE-KFKAHVISCTSKP 309 (309)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~P 309 (309)
|.+ ...++..+. -|-..|++++|++
T Consensus 327 dtq------~~~P~~~v~nihy~~iTDiaws~ 352 (434)
T KOG1009|consen 327 DTQ------TLEPLAVVDNIHYSAITDIAWSD 352 (434)
T ss_pred ccc------cccceEEEeeeeeeeecceeecC
Confidence 999 666665554 3667889999875
No 187
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.83 E-value=1.8e-18 Score=139.82 Aligned_cols=217 Identities=13% Similarity=0.301 Sum_probs=158.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|+.++|-|||..|+.+.. ..+.+||.. .+..++.+++|
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~n----------------------------------------dG~llqtLKgH 52 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTS----------------------------------------DGTLLQPLKGH 52 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCC----------------------------------------Ccccccccccc
Confidence 5899999999998887764 478899987 44567788999
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCce-------------------------------
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL------------------------------- 139 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v------------------------------- 139 (309)
...|.+++|+.+| ..|++|+.|..|.+|+..-.. . ....|.+.|
T Consensus 53 KDtVycVAys~dG-krFASG~aDK~VI~W~~klEG--~--LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~ 127 (1081)
T KOG1538|consen 53 KDTVYCVAYAKDG-KRFASGSADKSVIIWTSKLEG--I--LKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVS 127 (1081)
T ss_pred cceEEEEEEccCC-ceeccCCCceeEEEecccccc--e--eeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHH
Confidence 9999999999999 889999999999999854221 1 111334444
Q ss_pred --------eEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCC----cEEEEecCC
Q 021657 140 --------HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS----SVFGSSAED 207 (309)
Q Consensus 140 --------~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~l~~~~~~d 207 (309)
.+++|.. +|++|+.|-.+|+|.+-+-.... .-.+.+-.+.+.+|.+++|+|... -++++...+
T Consensus 128 K~kss~R~~~CsWtn-DGqylalG~~nGTIsiRNk~gEe----k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~ 202 (1081)
T KOG1538|consen 128 KHKSSSRIICCSWTN-DGQYLALGMFNGTISIRNKNGEE----KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWG 202 (1081)
T ss_pred hhhhheeEEEeeecC-CCcEEEEeccCceEEeecCCCCc----ceEEeCCCCCCCCceEEEecCCCCCCccceEEEEecc
Confidence 4555555 89999999999999887543210 112333345678999999999642 256777778
Q ss_pred CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC
Q 021657 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP 287 (309)
Q Consensus 208 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~ 287 (309)
.++.+|.+.. +.+..-..-.-...++.+.|+|.+++ .||.|+.+++|--.
T Consensus 203 qTLSFy~LsG----------------~~Igk~r~L~FdP~CisYf~NGEy~L--------iGGsdk~L~~fTR~------ 252 (1081)
T KOG1538|consen 203 QTLSFYQLSG----------------KQIGKDRALNFDPCCISYFTNGEYIL--------LGGSDKQLSLFTRD------ 252 (1081)
T ss_pred ceeEEEEecc----------------eeecccccCCCCchhheeccCCcEEE--------EccCCCceEEEeec------
Confidence 8888888764 12222223334457888999999998 67777999999775
Q ss_pred hhhHhHhhhcccceEEEeeeCC
Q 021657 288 QDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 288 ~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+..+.++-.....|++++.+|
T Consensus 253 -GvrLGTvg~~D~WIWtV~~~P 273 (1081)
T KOG1538|consen 253 -GVRLGTVGEQDSWIWTVQAKP 273 (1081)
T ss_pred -CeEEeeccccceeEEEEEEcc
Confidence 667777777778999999887
No 188
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.82 E-value=5.9e-19 Score=138.91 Aligned_cols=175 Identities=17% Similarity=0.313 Sum_probs=140.5
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.+|.+ +|.+-.|+|||.-|+|+++||.|++|.-...
T Consensus 99 sv~AH~~-A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM----------------------------------------- 136 (737)
T KOG1524|consen 99 SISAHAA-AISSGRWSPDGAGLLTAGEDGVIKIWSRSGM----------------------------------------- 136 (737)
T ss_pred hhhhhhh-hhhhcccCCCCceeeeecCCceEEEEeccch-----------------------------------------
Confidence 4678999 8999999999999999999999999985422
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
...++.....+|.|++|.|+..+.+.+.+ +.+.|=.+.... .+...++|.+-|.++.|++ ..+++++|+.|-..+
T Consensus 137 LRStl~Q~~~~v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n~--k~i~WkAHDGiiL~~~W~~-~s~lI~sgGED~kfK 211 (737)
T KOG1524|consen 137 LRSTVVQNEESIRCARWAPNSNSIVFCQG--GHISIKPLAANS--KIIRWRAHDGLVLSLSWST-QSNIIASGGEDFRFK 211 (737)
T ss_pred HHHHHhhcCceeEEEEECCCCCceEEecC--CeEEEeeccccc--ceeEEeccCcEEEEeecCc-cccceeecCCceeEE
Confidence 22334456678999999999877676654 567776766555 4667789999999999999 899999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+||.. +.++.+-..|.-+|++++|+|+. +++.++. ++++ +.+ ..
T Consensus 212 vWD~~-------G~~Lf~S~~~ey~ITSva~npd~--~~~v~S~-nt~R---~~~-----------------------p~ 255 (737)
T KOG1524|consen 212 IWDAQ-------GANLFTSAAEEYAITSVAFNPEK--DYLLWSY-NTAR---FSS-----------------------PR 255 (737)
T ss_pred eeccc-------CcccccCChhccceeeeeecccc--ceeeeee-eeee---ecC-----------------------CC
Confidence 99977 78888888899999999999993 5666663 3444 121 23
Q ss_pred CcceeeEEEccCCCeEEE
Q 021657 243 RDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~ 260 (309)
.+.|..++|++||..+.+
T Consensus 256 ~GSifnlsWS~DGTQ~a~ 273 (737)
T KOG1524|consen 256 VGSIFNLSWSADGTQATC 273 (737)
T ss_pred ccceEEEEEcCCCceeec
Confidence 467899999999998763
No 189
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.82 E-value=2.6e-18 Score=127.13 Aligned_cols=227 Identities=14% Similarity=0.249 Sum_probs=159.6
Q ss_pred cceEEEEEC-------CCCCEEEEecCCCcEEEEeCCccccccccCCcccc---------ccCCCCceeecCCCCCCCCc
Q 021657 10 NAEFALAMC-------PTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK---------SAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 10 ~~V~~~~~~-------~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 73 (309)
..|+..+|. |+..++|+.+.|.-|++||.-++.....+..-... .....+...+. .....+
T Consensus 105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfa---Gykrci 181 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFA---GYKRCI 181 (406)
T ss_pred CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEee---cccceE
Confidence 357777775 56778888888999999998877554443322111 11111111111 123344
Q ss_pred ccCCC-CCcCc--cccc-----ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEec
Q 021657 74 KAADG-PSVGP--RGIY-----NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 74 ~~~~~-~~~~~--~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (309)
++++. +.++. +... .+..+.|.+++|+|.....++.|+....+-||.-..+. ....+.+|.+.|+.++|.
T Consensus 182 rvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~--pl~llggh~gGvThL~~~ 259 (406)
T KOG2919|consen 182 RVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR--PLQLLGGHGGGVTHLQWC 259 (406)
T ss_pred EEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCC--ceeeecccCCCeeeEEec
Confidence 45544 22221 1111 23467899999999987799999999999999876666 677778999999999999
Q ss_pred cCCCCeEEEEcC-CCcEEEEecCCCCCCCCCCceeeeccCCC-CeeEE--EEecCCCcEEEEecCCCcEEEEeCCccccc
Q 021657 146 PLDDNLILTGSA-DNSVRMFDRRNLTSNGVGSPINKFEGHSA-AVLCV--QWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221 (309)
Q Consensus 146 ~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-~v~~~--~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~ 221 (309)
+ +|+.|++|+. |..|..||+|.. ..++..+..|.. .-..| ...|++++ ||+|+.||.|++||++..+..
T Consensus 260 e-dGn~lfsGaRk~dkIl~WDiR~~-----~~pv~~L~rhv~~TNQRI~FDld~~~~~-LasG~tdG~V~vwdlk~~gn~ 332 (406)
T KOG2919|consen 260 E-DGNKLFSGARKDDKILCWDIRYS-----RDPVYALERHVGDTNQRILFDLDPKGEI-LASGDTDGSVRVWDLKDLGNE 332 (406)
T ss_pred c-CcCeecccccCCCeEEEEeehhc-----cchhhhhhhhccCccceEEEecCCCCce-eeccCCCccEEEEecCCCCCc
Confidence 9 9999999987 779999999985 667777876655 33334 45688995 789999999999999985442
Q ss_pred ccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEec
Q 021657 222 VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 263 (309)
...+..|...++.++++|--+ +++++|
T Consensus 333 --------------~sv~~~~sd~vNgvslnP~mp-ilatss 359 (406)
T KOG2919|consen 333 --------------VSVTGNYSDTVNGVSLNPIMP-ILATSS 359 (406)
T ss_pred --------------ccccccccccccceecCcccc-eeeecc
Confidence 345567888999999999755 566554
No 190
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.2e-18 Score=137.76 Aligned_cols=176 Identities=19% Similarity=0.377 Sum_probs=138.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
-+|++|.+ +|.|+++.+++..+.+|+-||+|+.|++....-... .++ ..
T Consensus 338 ~tfraH~g-PVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~d----------------------------s~d--p~ 386 (577)
T KOG0642|consen 338 LTFRAHEG-PVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDD----------------------------SYD--PS 386 (577)
T ss_pred EEEecccC-ceEEEEecCCceEEEeeccCceeeeeccCCCCCccc----------------------------ccC--cc
Confidence 47899999 999999999999999999999999998762100000 000 11
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-----------c-----------------------
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-----------P----------------------- 127 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----------~----------------------- 127 (309)
.....+.||.+.|+.+++++.. ..|++++.||++++|+...... +
T Consensus 387 vl~~~l~Ghtdavw~l~~s~~~-~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~ 465 (577)
T KOG0642|consen 387 VLSGTLLGHTDAVWLLALSSTK-DRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTS 465 (577)
T ss_pred hhccceeccccceeeeeecccc-cceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhccccccc
Confidence 1234678999999999999987 6799999999999998753321 0
Q ss_pred --------eEEEee-------ccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEE
Q 021657 128 --------VIKVEK-------AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQ 192 (309)
Q Consensus 128 --------~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~ 192 (309)
....+. .....+..+.++| +..+.+++..|+.|+++|..+ ++++.....|...+++++
T Consensus 466 ~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~-~~~~~~~~hed~~Ir~~dn~~------~~~l~s~~a~~~svtsla 538 (577)
T KOG0642|consen 466 IDDMEVVSDLLIFESSASPGPRRYPQINKVVSHP-TADITFTAHEDRSIRFFDNKT------GKILHSMVAHKDSVTSLA 538 (577)
T ss_pred chhhhhhhheeeccccCCCcccccCccceEEecC-CCCeeEecccCCceecccccc------cccchheeeccceeccee
Confidence 000000 0013456677788 789999999999999999999 999999999999999999
Q ss_pred EecCCCcEEEEecCCCcEEEEeCCc
Q 021657 193 WSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 193 ~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+.|+|.+ |++++.||.+++|.+..
T Consensus 539 i~~ng~~-l~s~s~d~sv~l~kld~ 562 (577)
T KOG0642|consen 539 IDPNGPY-LMSGSHDGSVRLWKLDV 562 (577)
T ss_pred ecCCCce-EEeecCCceeehhhccc
Confidence 9999997 56999999999999976
No 191
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.80 E-value=1.3e-17 Score=137.41 Aligned_cols=226 Identities=19% Similarity=0.252 Sum_probs=159.3
Q ss_pred CCCCCcceEEEEECCCC--CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 5 TGHQDNAEFALAMCPTE--PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~--~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
-.|.. +|+.+.|-.+. .-+++++.||.|..|+++............ ...
T Consensus 288 ~sh~~-~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~----------------------------~~~ 338 (555)
T KOG1587|consen 288 VSHSE-PVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLE----------------------------SKK 338 (555)
T ss_pred ccCCc-CeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccc----------------------------ccc
Confidence 35777 89999997654 449999999999999887432211111100 000
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc------eEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP------VIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
....-......+++++|.+..+..|+.|+++|.|.--+....+.. .......|.++|+++.++|.....|++++
T Consensus 339 ~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g 418 (555)
T KOG1587|consen 339 HKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG 418 (555)
T ss_pred ccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec
Confidence 000001123468899999998899999999999887443222211 13345678899999999996666666666
Q ss_pred CCCcEEEEecC-CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 157 ADNSVRMFDRR-NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 157 ~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
|.+++||... . ..++..+..+...+++++|||....+|+++..||.+.+||+..... .+
T Consensus 419 -DW~vriWs~~~~------~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~-------------~P 478 (555)
T KOG1587|consen 419 -DWTVRIWSEDVI------ASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDE-------------EP 478 (555)
T ss_pred -cceeEeccccCC------CCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcccc-------------CC
Confidence 9999999988 5 6788888888888999999999999999999999999999987322 23
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP 287 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~ 287 (309)
+....-+....+.+.|++.+..+. .|...|.+.+|++......+
T Consensus 479 v~s~~~~~~~l~~~~~s~~g~~la--------vGd~~G~~~~~~l~~~l~~~ 522 (555)
T KOG1587|consen 479 VLSQKVCSPALTRVRWSPNGKLLA--------VGDANGTTHILKLSESLAVP 522 (555)
T ss_pred cccccccccccceeecCCCCcEEE--------EecCCCcEEEEEcCchhhcc
Confidence 333444456677888888777544 45555999999997544333
No 192
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=3.4e-17 Score=116.70 Aligned_cols=208 Identities=18% Similarity=0.253 Sum_probs=140.5
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
..++|.+ +|+.++|+ ..+|++|+ ||.|+=|............ .+|+.....
T Consensus 57 ~eqahdg-piy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K-------------------------~lwe~~~P~ 107 (325)
T KOG0649|consen 57 PEQAHDG-PIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATK-------------------------RLWEVKIPM 107 (325)
T ss_pred eccccCC-Ceeeeeee--hhheeecc-CceEEEeeehhhhhhccch-------------------------hhhhhcCcc
Confidence 3579999 99999998 45677776 5999999987643322111 112111111
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
... ...-..|++|-..|..+. ++.++.|+.++-||+++++ +...+.+|.+.|.++.-.. ....+++|+.||++|
T Consensus 108 ~~~--~~evPeINam~ldP~enS-i~~AgGD~~~y~~dlE~G~--i~r~~rGHtDYvH~vv~R~-~~~qilsG~EDGtvR 181 (325)
T KOG0649|consen 108 QVD--AVEVPEINAMWLDPSENS-ILFAGGDGVIYQVDLEDGR--IQREYRGHTDYVHSVVGRN-ANGQILSGAEDGTVR 181 (325)
T ss_pred ccC--cccCCccceeEeccCCCc-EEEecCCeEEEEEEecCCE--EEEEEcCCcceeeeeeecc-cCcceeecCCCccEE
Confidence 110 011246899999988745 5555689999999999999 8899999999999999865 667899999999999
Q ss_pred EEecCCCCCCCCCCceeeeccC----------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGH----------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
+||.++ .+.+..+..- ...|-+++. +..++ .++....+.+|.++...
T Consensus 182 vWd~kt------~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWl--vCGgGp~lslwhLrsse------------- 238 (325)
T KOG0649|consen 182 VWDTKT------QKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWL--VCGGGPKLSLWHLRSSE------------- 238 (325)
T ss_pred EEeccc------cceeEEeccccChhhcCcccCceeEEEec--cCceE--EecCCCceeEEeccCCC-------------
Confidence 999999 6666666432 223545554 44554 34446789999999822
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+++.+.+ ++..+.|.. ..++ ++|..+.|.-|.+.
T Consensus 239 ~t~vfpipa---~v~~v~F~~--d~vl--------~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 239 STCVFPIPA---RVHLVDFVD--DCVL--------IGGEGNHVQSYTLN 274 (325)
T ss_pred ceEEEeccc---ceeEeeeec--ceEE--------Eeccccceeeeeec
Confidence 223444444 456667764 2334 34444788888876
No 193
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.80 E-value=1.7e-16 Score=131.94 Aligned_cols=208 Identities=28% Similarity=0.572 Sum_probs=157.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecC-CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGK-DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
..+.+|.. .|..++|+|++..+++++. |+.+++|++..
T Consensus 149 ~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------- 187 (466)
T COG2319 149 RTLEGHSE-SVTSLAFSPDGKLLASGSSLDGTIKLWDLRT---------------------------------------- 187 (466)
T ss_pred EEEecCcc-cEEEEEECCCCCEEEecCCCCCceEEEEcCC----------------------------------------
Confidence 35678888 8999999999999998886 99999999973
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEE-EeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK-VEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
...+..+.+|...|.+++|+|++...+++++.|+.|++||...+. ... .+..|.... ...|+| ++..+++++.|+
T Consensus 188 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~d~ 263 (466)
T COG2319 188 GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK--LLRSTLSGHSDSV-VSSFSP-DGSLLASGSSDG 263 (466)
T ss_pred CceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCc--EEeeecCCCCcce-eEeECC-CCCEEEEecCCC
Confidence 233455666999999999999884356666999999999887555 444 577777775 448999 778888999999
Q ss_pred cEEEEecCCCCCCCCCCc-eeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 160 SVRMFDRRNLTSNGVGSP-INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.+++||++.. .. +..+..|...+.++.|.|++..++ +++.|+.+.+||+........ ..
T Consensus 264 ~~~~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~-------------~~ 323 (466)
T COG2319 264 TIRLWDLRSS------SSLLRTLSGHSSSVLSVAFSPDGKLLA-SGSSDGTVRLWDLETGKLLSS-------------LT 323 (466)
T ss_pred cEEEeeecCC------CcEEEEEecCCccEEEEEECCCCCEEE-EeeCCCcEEEEEcCCCceEEE-------------ee
Confidence 9999999973 32 444466788999999999888655 588888899998877222111 01
Q ss_pred ecCCCcceeeEEEccCC-CeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 239 HAGHRDKVVDFHWNASD-PWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~-~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...|...+..+.| +.. ..++.++ ..|+.+.+|++..
T Consensus 324 ~~~~~~~~~~~~~-~~~~~~~~~~~-------~~d~~~~~~~~~~ 360 (466)
T COG2319 324 LKGHEGPVSSLSF-SPDGSLLVSGG-------SDDGTIRLWDLRT 360 (466)
T ss_pred ecccCCceEEEEE-CCCCCEEEEee-------cCCCcEEeeecCC
Confidence 2367778999999 433 4555432 3448999999984
No 194
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=9.4e-17 Score=132.30 Aligned_cols=224 Identities=12% Similarity=0.086 Sum_probs=141.6
Q ss_pred cCCCCCcceEEEEECCCCCEEEEec---CCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGG---KDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+..+.. .+.+.+|+|||+.|+..+ .+..|.+|++.++..
T Consensus 194 lt~~~~-~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~------------------------------------- 235 (429)
T PRK03629 194 VHRSPQ-PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV------------------------------------- 235 (429)
T ss_pred eecCCC-ceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCe-------------------------------------
Confidence 344454 688999999999988643 345788888865311
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA- 157 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~- 157 (309)
+.+..+.+ .+....|+|+|..++++.+.+| .|.+||+.+++ . ..+..+...+....|+| +++.|+..+.
T Consensus 236 -~~l~~~~~---~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~--~-~~lt~~~~~~~~~~wSP-DG~~I~f~s~~ 307 (429)
T PRK03629 236 -RQVASFPR---HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--I-RQVTDGRSNNTEPTWFP-DSQNLAYTSDQ 307 (429)
T ss_pred -EEccCCCC---CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC--E-EEccCCCCCcCceEECC-CCCEEEEEeCC
Confidence 11111222 2345799999955555555555 58899998776 2 33344455678999999 8887776655
Q ss_pred CCcEEEE--ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCCC
Q 021657 158 DNSVRMF--DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 158 dg~i~i~--d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
++...+| |+.. +. ...+...........|+|||++++.++..++ .|.+||+... ..
T Consensus 308 ~g~~~Iy~~d~~~------g~-~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g-~~------------ 367 (429)
T PRK03629 308 AGRPQVYKVNING------GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG-GV------------ 367 (429)
T ss_pred CCCceEEEEECCC------CC-eEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCC-Ce------------
Confidence 4444555 5554 32 3344333445567899999998765555443 4778888652 11
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+.. ........|+|++..++.+..+. ....+.++++. +.....+.+|.+.+...+|+|
T Consensus 368 ---~~Lt~-~~~~~~p~~SpDG~~i~~~s~~~-----~~~~l~~~~~~-------G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 368 ---QVLTD-TFLDETPSIAPNGTMVIYSSSQG-----MGSVLNLVSTD-------GRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred ---EEeCC-CCCCCCceECCCCCEEEEEEcCC-----CceEEEEEECC-------CCCeEECccCCCCcCCcccCC
Confidence 11111 11234678999998877654422 12457777876 445566777888999999998
No 195
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=5.5e-17 Score=121.98 Aligned_cols=197 Identities=15% Similarity=0.271 Sum_probs=139.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc-c
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN-G 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 89 (309)
.+..++|++.-..+|++..|-.||+||-... ....++ .
T Consensus 100 dlr~~aWhqH~~~fava~nddvVriy~ksst-----------------------------------------~pt~Lks~ 138 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSST-----------------------------------------CPTKLKSV 138 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEEeccCCC-----------------------------------------CCceecch
Confidence 4678999997777899999999999997631 111111 2
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc------------ceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS------------PVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
.+..|++++|-|.+...|+.|+..| |.+|.....-. ..+....+| .+|++|+|.+ ++..+++++.
T Consensus 139 sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~-dgt~l~tAS~ 215 (445)
T KOG2139|consen 139 SQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNE-DGTILVTASF 215 (445)
T ss_pred hhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcC-CCCEEeeccc
Confidence 3467999999999888899998866 99998643110 011122333 6899999999 8988888876
Q ss_pred -CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 158 -DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 158 -dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|..|.|||..+.+ +.++. ....+.++-+.|+||+.++| +++-|+..++|+....-..
T Consensus 216 gsssi~iWdpdtg~----~~pL~--~~glgg~slLkwSPdgd~lf-aAt~davfrlw~e~q~wt~--------------- 273 (445)
T KOG2139|consen 216 GSSSIMIWDPDTGQ----KIPLI--PKGLGGFSLLKWSPDGDVLF-AATCDAVFRLWQENQSWTK--------------- 273 (445)
T ss_pred CcceEEEEcCCCCC----ccccc--ccCCCceeeEEEcCCCCEEE-Eecccceeeeehhccccee---------------
Confidence 6789999999843 33333 23456788899999999877 6677999999966541111
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.....-.+.|....|+|.|.+|+.+++ |.-++|.+..
T Consensus 274 erw~lgsgrvqtacWspcGsfLLf~~s---------gsp~lysl~f 310 (445)
T KOG2139|consen 274 ERWILGSGRVQTACWSPCGSFLLFACS---------GSPRLYSLTF 310 (445)
T ss_pred cceeccCCceeeeeecCCCCEEEEEEc---------CCceEEEEee
Confidence 011122348999999999999999887 3455565543
No 196
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.78 E-value=6.6e-18 Score=121.62 Aligned_cols=166 Identities=19% Similarity=0.321 Sum_probs=128.6
Q ss_pred ceEEEEECC-CCC--EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCP-TEP--YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~-~~~--~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
.|.|..+.- ++. +|+.|-++|.+.+||+.++.....+.. ..+.....
T Consensus 152 svmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~------------------------------~~kv~~~~ 201 (323)
T KOG0322|consen 152 SVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQ------------------------------SSKVESPN 201 (323)
T ss_pred ceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecccc------------------------------ccccccch
Confidence 566776533 333 466888999999999987533322221 22334455
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC--CcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG--TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
..|.++|.++.|.+.- ..=++|+.+..+..|++... ..+...........|..+.+.| +++.+|+++.|+.||+|.
T Consensus 202 ash~qpvlsldyas~~-~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRp-D~KIlATAGWD~RiRVys 279 (323)
T KOG0322|consen 202 ASHKQPVLSLDYASSC-DRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRP-DGKILATAGWDHRIRVYS 279 (323)
T ss_pred hhccCcceeeeechhh-cCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEcc-CCcEEeecccCCcEEEEE
Confidence 6799999999998764 44567888888999988643 3223333344456789999999 999999999999999999
Q ss_pred cCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
.++ ..++..++-|+..|++++|+|+.+ ++|+++.|++|.+|++
T Consensus 280 wrt------l~pLAVLkyHsagvn~vAfspd~~-lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 280 WRT------LNPLAVLKYHSAGVNAVAFSPDCE-LMAAASKDARISLWKL 322 (323)
T ss_pred ecc------CCchhhhhhhhcceeEEEeCCCCc-hhhhccCCceEEeeec
Confidence 999 899999999999999999999977 6899999999999986
No 197
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.78 E-value=2.1e-17 Score=130.23 Aligned_cols=163 Identities=21% Similarity=0.351 Sum_probs=120.0
Q ss_pred ceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
.|+|+.|-|. ...++.+-.+|.+.++|..-. .....+................. ...+..++..+.-
T Consensus 221 svT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~--~~~t~p~~~~~k~~~~f~i~t~k----------sk~~rNPv~~w~~ 288 (636)
T KOG2394|consen 221 SVTCIKWVPGSDSLFLVAHASGNLYLYDKEIV--CGATAPSYQALKDGDQFAILTSK----------SKKTRNPVARWHI 288 (636)
T ss_pred ceEEEEEEeCCCceEEEEEecCceEEeecccc--ccCCCCcccccCCCCeeEEeeee----------ccccCCccceeEe
Confidence 6999999994 456777888999999997321 11111111111111111111110 0011244555554
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
-.+.|+..+|+||| ++||+.+.||.++|+|..+.+ ....++.--+...|++|+| +++++++|+.|.-|.||.+..
T Consensus 289 ~~g~in~f~FS~DG-~~LA~VSqDGfLRvF~fdt~e--Llg~mkSYFGGLLCvcWSP-DGKyIvtGGEDDLVtVwSf~e- 363 (636)
T KOG2394|consen 289 GEGSINEFAFSPDG-KYLATVSQDGFLRIFDFDTQE--LLGVMKSYFGGLLCVCWSP-DGKYIVTGGEDDLVTVWSFEE- 363 (636)
T ss_pred ccccccceeEcCCC-ceEEEEecCceEEEeeccHHH--HHHHHHhhccceEEEEEcC-CccEEEecCCcceEEEEEecc-
Confidence 56689999999998 899999999999999998877 5555555667899999999 999999999999999999998
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEec
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSP 195 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~ 195 (309)
.+.+..-++|+.+|+.++|.|
T Consensus 364 -----rRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 364 -----RRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred -----ceEEEeccccccceeeEeecc
Confidence 899999999999999999997
No 198
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=1.4e-18 Score=137.20 Aligned_cols=186 Identities=17% Similarity=0.309 Sum_probs=140.7
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC-CCeEEEEcCCCc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD-DNLILTGSADNS 160 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~ 160 (309)
...+.+.+|++.|+++.|+.+| .+|++|++|-.+.|||.-..+ ..-..-.+|...|.++.|-|.. ..++++|..|..
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~dG-~lL~SGSDD~r~ivWd~~~~K-llhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~ 118 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNADG-ELLASGSDDTRLIVWDPFEYK-LLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKL 118 (758)
T ss_pred chhhhhccccceecceeecCCC-CEEeecCCcceEEeecchhcc-eeeeeecccccceeEEeeeccCCCeEEEeccCcce
Confidence 4456789999999999999999 899999999999999987555 2334456899999999999843 357889999999
Q ss_pred EEEEecCCCCC----CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 161 VRMFDRRNLTS----NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 161 i~i~d~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++||+..... .+.......+..|...|..|+..|++++.|.++++||+|+-||++........... ...+
T Consensus 119 i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~-----~~~l 193 (758)
T KOG1310|consen 119 IKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDC-----PSIL 193 (758)
T ss_pred EEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccc-----cHHH
Confidence 99999985221 11134555667788889999999999889999999999999999974332221100 1111
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+...--...++.++|..+++++ .|+.|-..++||.+
T Consensus 194 ~ny~~~lielk~ltisp~rp~~la-------VGgsdpfarLYD~R 231 (758)
T KOG1310|consen 194 VNYNPQLIELKCLTISPSRPYYLA-------VGGSDPFARLYDRR 231 (758)
T ss_pred HHhchhhheeeeeeecCCCCceEE-------ecCCCchhhhhhhh
Confidence 222222345689999999999998 45555999999954
No 199
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.77 E-value=5.1e-16 Score=117.04 Aligned_cols=233 Identities=12% Similarity=0.183 Sum_probs=149.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcc--cccc-CCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT--AKSA-GSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
.+..+.|+.+...|..|+.||. ++|+.+............ .... -....+..+.. ......++.+......+..+
T Consensus 7 ti~~~~~Nqd~~~lsvGs~~Gy-k~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~-~qpr~Lkv~~~Kk~~~ICe~ 84 (391)
T KOG2110|consen 7 TINFIGFNQDSTLLSVGSKDGY-KIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSI-KQPRKLKVVHFKKKTTICEI 84 (391)
T ss_pred ceeeeeeccceeEEEccCCCce-eEEecCchHHhhcccCCCeEEEEeecccceeEEEec-CCCceEEEEEcccCceEEEE
Confidence 6788889999989999999875 577776542211111110 0000 11111111111 11122333332222222211
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec---cCCceeEEEeccCCCCeEEEEc--CCCcEE
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA---HDADLHCVDWNPLDDNLILTGS--ADNSVR 162 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~--~dg~i~ 162 (309)
. ...+|.++.++.+ .|+.+-.+. |+|||++..+ ...++.. +...+.++.+++ .+.+++--+ ..|.|.
T Consensus 85 ~-fpt~IL~VrmNr~---RLvV~Lee~-IyIydI~~Mk--lLhTI~t~~~n~~gl~AlS~n~-~n~ylAyp~s~t~GdV~ 156 (391)
T KOG2110|consen 85 F-FPTSILAVRMNRK---RLVVCLEES-IYIYDIKDMK--LLHTIETTPPNPKGLCALSPNN-ANCYLAYPGSTTSGDVV 156 (391)
T ss_pred e-cCCceEEEEEccc---eEEEEEccc-EEEEecccce--eehhhhccCCCccceEeeccCC-CCceEEecCCCCCceEE
Confidence 1 3456788888653 466665554 9999999887 5555433 344455666655 455666533 358999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc-EEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+||..+ .+++..+..|++++.+++|+++|. ++|++++.|+ ||||.+.. .+.+++++-
T Consensus 157 l~d~~n------l~~v~~I~aH~~~lAalafs~~G~-llATASeKGTVIRVf~v~~---------------G~kl~eFRR 214 (391)
T KOG2110|consen 157 LFDTIN------LQPVNTINAHKGPLAALAFSPDGT-LLATASEKGTVIRVFSVPE---------------GQKLYEFRR 214 (391)
T ss_pred EEEccc------ceeeeEEEecCCceeEEEECCCCC-EEEEeccCceEEEEEEcCC---------------ccEeeeeeC
Confidence 999999 899999999999999999999999 6899999988 79999987 333444432
Q ss_pred C--CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 242 H--RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 242 ~--~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
- -..|.+++|+|+.++|.++++. ++|++|.+..-
T Consensus 215 G~~~~~IySL~Fs~ds~~L~~sS~T--------eTVHiFKL~~~ 250 (391)
T KOG2110|consen 215 GTYPVSIYSLSFSPDSQFLAASSNT--------ETVHIFKLEKV 250 (391)
T ss_pred CceeeEEEEEEECCCCCeEEEecCC--------CeEEEEEeccc
Confidence 2 3468999999999977755444 69999999853
No 200
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.77 E-value=3.5e-18 Score=132.21 Aligned_cols=230 Identities=13% Similarity=0.157 Sum_probs=169.5
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
+.+.++.+|+.|+.|+..|.|-.+|+.+............+....-.....+...+....++++|... ..++.++.| .
T Consensus 133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~G-tElHClk~~-~ 210 (545)
T KOG1272|consen 133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNG-TELHCLKRH-I 210 (545)
T ss_pred eeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCC-cEEeehhhc-C
Confidence 58899999999999999999999999987555444433322221111111222222334445555433 233445544 4
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN 172 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 172 (309)
.|..+.|.|.. .+|++++..|.++.-|+.+++ .+..+....+.+..|+-+| -...+-+|...|+|.+|....
T Consensus 211 ~v~rLeFLPyH-fLL~~~~~~G~L~Y~DVS~Gk--lVa~~~t~~G~~~vm~qNP-~NaVih~GhsnGtVSlWSP~s---- 282 (545)
T KOG1272|consen 211 RVARLEFLPYH-FLLVAASEAGFLKYQDVSTGK--LVASIRTGAGRTDVMKQNP-YNAVIHLGHSNGTVSLWSPNS---- 282 (545)
T ss_pred chhhhcccchh-heeeecccCCceEEEeechhh--hhHHHHccCCccchhhcCC-ccceEEEcCCCceEEecCCCC----
Confidence 68899999998 889999999999999999999 6666767778899999999 888999999999999999998
Q ss_pred CCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEc
Q 021657 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252 (309)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 252 (309)
.+++..+-.|.++|.+|++.++|.+ +|+.+.|..++|||+++..++. ++.. ..+...+++|
T Consensus 283 --kePLvKiLcH~g~V~siAv~~~G~Y-MaTtG~Dr~~kIWDlR~~~ql~---------------t~~t-p~~a~~ls~S 343 (545)
T KOG1272|consen 283 --KEPLVKILCHRGPVSSIAVDRGGRY-MATTGLDRKVKIWDLRNFYQLH---------------TYRT-PHPASNLSLS 343 (545)
T ss_pred --cchHHHHHhcCCCcceEEECCCCcE-EeecccccceeEeeeccccccc---------------eeec-CCCccccccc
Confidence 8899999999999999999999997 5799999999999999954322 1111 2356778888
Q ss_pred cCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 253 ASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 253 ~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+ .|+++-+ ..|.||.=.
T Consensus 344 qkg-lLA~~~G---------~~v~iw~d~ 362 (545)
T KOG1272|consen 344 QKG-LLALSYG---------DHVQIWKDA 362 (545)
T ss_pred ccc-ceeeecC---------Ceeeeehhh
Confidence 643 2333222 589999744
No 201
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.76 E-value=1.6e-16 Score=115.99 Aligned_cols=158 Identities=20% Similarity=0.374 Sum_probs=108.7
Q ss_pred EEEEEecCCCcEEEEEcC---------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE--cCCCcEEE
Q 021657 95 EDVTFCPSSAQEFCSVGD---------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG--SADNSVRM 163 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~--~~dg~i~i 163 (309)
..+.|+|+|..+++.... -|...+|.++....+.........++|.+++|+| +++.|++. ..++.|.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP-~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSP-NGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECc-CCCEEEEEEccCCcccEE
Confidence 467899998665555541 2456677665444333333333455799999999 88876554 45789999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec--CCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA--EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
||++ .+.+..+. ...++.+.|+|+|++++++|. ..|.|.+||+++ ...+....
T Consensus 88 yd~~-------~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~---------------~~~i~~~~- 142 (194)
T PF08662_consen 88 YDVK-------GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK---------------KKKISTFE- 142 (194)
T ss_pred EcCc-------ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC---------------CEEeeccc-
Confidence 9996 56677775 467889999999997654432 347799999996 22333322
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
| ..++.++|+|+|.+++.+.+.- --..|+.++||++.
T Consensus 143 ~-~~~t~~~WsPdGr~~~ta~t~~--r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 143 H-SDATDVEWSPDGRYLATATTSP--RLRVDNGFKIWSFQ 179 (194)
T ss_pred c-CcEEEEEEcCCCCEEEEEEecc--ceeccccEEEEEec
Confidence 3 3478999999999888765431 23356999999997
No 202
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=2e-16 Score=130.89 Aligned_cols=225 Identities=12% Similarity=0.111 Sum_probs=142.5
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCC---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
.+..|.. .+.+.+|+|||+.|+..+.+ ..|.+||+.++..
T Consensus 198 ~lt~~~~-~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~------------------------------------ 240 (433)
T PRK04922 198 TILRSAE-PILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQR------------------------------------ 240 (433)
T ss_pred EeecCCC-ccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCE------------------------------------
Confidence 4555665 68899999999998877643 4689999875321
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS- 156 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~- 156 (309)
..+....+......|+|+|..++++.+.+| .|.+||+.+++ ...+..+.......+|+| +++.|+..+
T Consensus 241 -----~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~---~~~lt~~~~~~~~~~~sp-DG~~l~f~sd 311 (433)
T PRK04922 241 -----ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ---LTRLTNHFGIDTEPTWAP-DGKSIYFTSD 311 (433)
T ss_pred -----EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC---eEECccCCCCccceEECC-CCCEEEEEEC
Confidence 111122333457799999965556666665 59999998776 333444555567889999 888777665
Q ss_pred CCCc--EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCC
Q 021657 157 ADNS--VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 157 ~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
.+|. |+++|+.+ ++ ...+..........+|+|+|++++++...++ .|.+||+.. ++..
T Consensus 312 ~~g~~~iy~~dl~~------g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~-g~~~---------- 373 (433)
T PRK04922 312 RGGRPQIYRVAASG------GS-AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLST-GSVR---------- 373 (433)
T ss_pred CCCCceEEEEECCC------CC-eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCC-CCeE----------
Confidence 4555 66666655 33 2223222334557899999998665544333 588999865 2111
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+. +........|+|++..++.+.... ..+.|.++++. +.....+..+.+.+...+|+|
T Consensus 374 -----~Lt-~~~~~~~p~~spdG~~i~~~s~~~-----g~~~L~~~~~~-------g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 374 -----TLT-PGSLDESPSFAPNGSMVLYATREG-----GRGVLAAVSTD-------GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred -----ECC-CCCCCCCceECCCCCEEEEEEecC-----CceEEEEEECC-------CCceEEcccCCCCCCCCccCC
Confidence 111 222345678999999877654321 23567777775 333455555667788888887
No 203
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.76 E-value=1.6e-16 Score=117.57 Aligned_cols=195 Identities=15% Similarity=0.227 Sum_probs=151.0
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC-cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
-..+|+|.+|++++ ..+|.+-....|.||...... ......+..|...|++++|+| ..+.|++++.|..-++|....
T Consensus 9 ~~~pitchAwn~dr-t~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap-~snrIvtcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 9 LLEPITCHAWNSDR-TQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAP-KSNRIVTCSHDRNAYVWTQPS 86 (361)
T ss_pred ccCceeeeeecCCC-ceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecC-CCCceeEccCCCCccccccCC
Confidence 45789999999998 789999999999999988776 667888999999999999999 999999999999999999854
Q ss_pred CCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee
Q 021657 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD 248 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 248 (309)
... .++.-.+..++...+++.|+|.+.. ||+|+.-..|.||-+.....- --....-..+...|++
T Consensus 87 ~~~---WkptlvLlRiNrAAt~V~WsP~enk-FAVgSgar~isVcy~E~ENdW-----------WVsKhikkPirStv~s 151 (361)
T KOG1523|consen 87 GGT---WKPTLVLLRINRAATCVKWSPKENK-FAVGSGARLISVCYYEQENDW-----------WVSKHIKKPIRSTVTS 151 (361)
T ss_pred CCe---eccceeEEEeccceeeEeecCcCce-EEeccCccEEEEEEEecccce-----------ehhhhhCCccccceee
Confidence 222 5666677778899999999999984 889999999999988762211 0001122346678999
Q ss_pred EEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc------------ccCChhhHhHhhhcccceEEEeeeCC
Q 021657 249 FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL------------IYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 249 ~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~------------~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+.|+|++- +++ +|+.|+..+|+..--. ...|-++++.++..-.+.|..+.|+|
T Consensus 152 ldWhpnnV-Lla-------aGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~ 216 (361)
T KOG1523|consen 152 LDWHPNNV-LLA-------AGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSP 216 (361)
T ss_pred eeccCCcc-eec-------ccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCC
Confidence 99999654 555 5556699999984321 12334566677766678899998886
No 204
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=5.5e-16 Score=128.48 Aligned_cols=226 Identities=12% Similarity=0.112 Sum_probs=144.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecC---CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGK---DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.+..|.. .+.+.+|+|||+.|+..+. +..|.+||+.++..
T Consensus 195 ~~lt~~~~-~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~----------------------------------- 238 (435)
T PRK05137 195 RYLTDGSS-LVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR----------------------------------- 238 (435)
T ss_pred EEEecCCC-CeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-----------------------------------
Confidence 34666777 7899999999999887653 46899999875311
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCe--EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC--LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
..+..+.+.+....|+|+|..++++.+.++. |.+||+.+++ ...+..+........|+| +++.++..+
T Consensus 239 ------~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~---~~~Lt~~~~~~~~~~~sp-DG~~i~f~s 308 (435)
T PRK05137 239 ------ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT---TTRLTDSPAIDTSPSYSP-DGSQIVFES 308 (435)
T ss_pred ------EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc---eEEccCCCCccCceeEcC-CCCEEEEEE
Confidence 1223344566788999999666667766665 7777887766 334445556677899999 888777665
Q ss_pred C-CC--cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCC
Q 021657 157 A-DN--SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 157 ~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
. +| .|+++|+.. +. ...+......+....|+|+|++++.+....+ .|.+||+... ..
T Consensus 309 ~~~g~~~Iy~~d~~g------~~-~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~-~~---------- 370 (435)
T PRK05137 309 DRSGSPQLYVMNADG------SN-PRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGS-GE---------- 370 (435)
T ss_pred CCCCCCeEEEEECCC------CC-eEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCC-ce----------
Confidence 3 33 577888765 33 3344334455677899999998665543333 5777776441 11
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCC--CeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGG--GTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~d--g~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+. ....+....|+|++..++.+.... +.+ ..|.++++.. .. ...+. ..+.+...+|+|
T Consensus 371 -----~~lt-~~~~~~~p~~spDG~~i~~~~~~~----~~~~~~~L~~~dl~g------~~-~~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 371 -----RILT-SGFLVEGPTWAPNGRVIMFFRQTP----GSGGAPKLYTVDLTG------RN-EREVP-TPGDASDPAWSP 432 (435)
T ss_pred -----Eecc-CCCCCCCCeECCCCCEEEEEEccC----CCCCcceEEEEECCC------Cc-eEEcc-CCCCccCcccCC
Confidence 0111 112367789999999877665432 221 3677777762 22 23333 234566777776
No 205
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.74 E-value=1.9e-15 Score=121.23 Aligned_cols=210 Identities=8% Similarity=0.146 Sum_probs=135.2
Q ss_pred eEEEEECCCCCEEEEecC-CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 12 EFALAMCPTEPYVLSGGK-DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
...++|+|++++|++++. ++.|.+|++++..... ..+..+. +
T Consensus 82 p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~------------------------------------~~~~~~~-~ 124 (330)
T PRK11028 82 PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPV------------------------------------APIQIIE-G 124 (330)
T ss_pred ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCC------------------------------------Cceeecc-C
Confidence 468999999998887764 8899999986321000 0011111 1
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce-----EEEeeccCCceeEEEeccCCCCeEEEEcC-CCcEEEE
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-----IKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMF 164 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~ 164 (309)
......++++|+++.++++...++.|.+||+.+..... .... ........+.|+| ++++++++.. ++.|.+|
T Consensus 125 ~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~-~~g~~p~~~~~~p-dg~~lyv~~~~~~~v~v~ 202 (330)
T PRK11028 125 LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTT-VEGAGPRHMVFHP-NQQYAYCVNELNSSVDVW 202 (330)
T ss_pred CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceec-CCCCCCceEEECC-CCCEEEEEecCCCEEEEE
Confidence 23356788999995666777788999999997633110 0111 1234567899999 8998877766 8999999
Q ss_pred ecCCCCCCCCCCceeeeccC------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 165 DRRNLTSNGVGSPINKFEGH------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
|+..... ..+.+..+... ......+.++|++++++++...++.|.+|++...+... ..+..
T Consensus 203 ~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~-----------~~~~~ 269 (330)
T PRK11028 203 QLKDPHG--EIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVL-----------SFEGH 269 (330)
T ss_pred EEeCCCC--CEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeE-----------EEeEE
Confidence 9974210 02233333221 12234688999999887665668999999997632211 11111
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
... ......+.++|++.+++++...+ ++|.+|+++
T Consensus 270 ~~~-~~~p~~~~~~~dg~~l~va~~~~-------~~v~v~~~~ 304 (330)
T PRK11028 270 QPT-ETQPRGFNIDHSGKYLIAAGQKS-------HHISVYEID 304 (330)
T ss_pred Eec-cccCCceEECCCCCEEEEEEccC-------CcEEEEEEc
Confidence 111 12456789999999999865544 899999986
No 206
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=4.3e-17 Score=124.70 Aligned_cols=180 Identities=17% Similarity=0.226 Sum_probs=133.8
Q ss_pred EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCC
Q 021657 95 EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGV 174 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 174 (309)
..++|+++| ..+++|+.||++|+|+..... .......|...|.++.|+| ++++|++-+.| ..+||+.++
T Consensus 148 k~vaf~~~g-s~latgg~dg~lRv~~~Ps~~--t~l~e~~~~~eV~DL~FS~-dgk~lasig~d-~~~VW~~~~------ 216 (398)
T KOG0771|consen 148 KVVAFNGDG-SKLATGGTDGTLRVWEWPSML--TILEEIAHHAEVKDLDFSP-DGKFLASIGAD-SARVWSVNT------ 216 (398)
T ss_pred eEEEEcCCC-CEeeeccccceEEEEecCcch--hhhhhHhhcCccccceeCC-CCcEEEEecCC-ceEEEEecc------
Confidence 678999998 889999999999999977666 5667778999999999999 99999999999 899999999
Q ss_pred CCceeeecc--CCCCeeEEEEecCC---C-cEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee
Q 021657 175 GSPINKFEG--HSAAVLCVQWSPDK---S-SVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD 248 (309)
Q Consensus 175 ~~~~~~~~~--~~~~v~~~~~~~~~---~-~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 248 (309)
+..+.+... .+.....+.|+.|+ . ++++.-..-+.|+.||+...... . .....+.......|.+
T Consensus 217 g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~-~---------~l~~~~~~~~~~siSs 286 (398)
T KOG0771|consen 217 GAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGS-N---------FLRLRKKIKRFKSISS 286 (398)
T ss_pred CchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccc-c---------ccchhhhhhccCccee
Confidence 666655542 23345667787776 2 24444455677888887664331 1 0111122233457999
Q ss_pred EEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhH-hhhcccceEEEeeeCC
Q 021657 249 FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLA-ELEKFKAHVISCTSKP 309 (309)
Q Consensus 249 ~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~P 309 (309)
++.+++|.+++ -|+.||.|-|++..+ .++++ .-+.|...|+.+.|+|
T Consensus 287 l~VS~dGkf~A--------lGT~dGsVai~~~~~------lq~~~~vk~aH~~~VT~ltF~P 334 (398)
T KOG0771|consen 287 LAVSDDGKFLA--------LGTMDGSVAIYDAKS------LQRLQYVKEAHLGFVTGLTFSP 334 (398)
T ss_pred EEEcCCCcEEE--------EeccCCcEEEEEece------eeeeEeehhhheeeeeeEEEcC
Confidence 99999888655 455569999999984 44433 3457999999999998
No 207
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=5.5e-16 Score=127.93 Aligned_cols=227 Identities=10% Similarity=0.061 Sum_probs=137.9
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCC---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
.+..+.. .+.+.+|+|||+.|+..+.+ ..|.+||+.++...
T Consensus 190 ~l~~~~~-~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~----------------------------------- 233 (427)
T PRK02889 190 SALSSPE-PIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR----------------------------------- 233 (427)
T ss_pred EeccCCC-CcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-----------------------------------
Confidence 3445666 78899999999998876643 35999998754211
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcC--CCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR--VGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS- 156 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~- 156 (309)
.+....+.+....|+|+|..++++.+.+|...||.+. .+. ...+..+........|+| +++.++..+
T Consensus 234 ------~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSp-DG~~l~f~s~ 303 (427)
T PRK02889 234 ------VVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG---LRRLTQSSGIDTEPFFSP-DGRSIYFTSD 303 (427)
T ss_pred ------EeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC---cEECCCCCCCCcCeEEcC-CCCEEEEEec
Confidence 1112233456789999995555677888876766553 333 333444555567789999 888777554
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCCCc
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
.+|...+|.+.... +. ...+..........+|+|+|++++.+...++ .|.+||+... +..
T Consensus 304 ~~g~~~Iy~~~~~~----g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g-~~~------------ 365 (427)
T PRK02889 304 RGGAPQIYRMPASG----GA-AQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATG-QVT------------ 365 (427)
T ss_pred CCCCcEEEEEECCC----Cc-eEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCC-CeE------------
Confidence 35666677654311 22 2222222233446789999998654443333 6899998762 111
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+.. ........|+|++..++.+.... + ...+.+-++. +.....+..+.+.+...+|+|
T Consensus 366 ---~lt~-~~~~~~p~~spdg~~l~~~~~~~----g-~~~l~~~~~~-------g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 366 ---ALTD-TTRDESPSFAPNGRYILYATQQG----G-RSVLAAVSSD-------GRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred ---EccC-CCCccCceECCCCCEEEEEEecC----C-CEEEEEEECC-------CCceEEeecCCCCCCCCccCC
Confidence 1111 12336789999999877765433 1 1234444443 334444555667788888887
No 208
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.74 E-value=1e-15 Score=116.23 Aligned_cols=200 Identities=15% Similarity=0.162 Sum_probs=149.5
Q ss_pred CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEec
Q 021657 22 PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCP 101 (309)
Q Consensus 22 ~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 101 (309)
..|++|-.+|.+.+|..+.+... ..++..+..+ ..+..+.-++
T Consensus 116 g~Litc~~sG~l~~~~~k~~d~h------------------------------------ss~l~~la~g-~g~~~~r~~~ 158 (412)
T KOG3881|consen 116 GTLITCVSSGNLQVRHDKSGDLH------------------------------------SSKLIKLATG-PGLYDVRQTD 158 (412)
T ss_pred CEEEEEecCCcEEEEeccCCccc------------------------------------cccceeeecC-CceeeeccCC
Confidence 46888899999999998743211 1112222323 4566777777
Q ss_pred CCCcEEEEEcCC--CeEEEEEcCCCCcceEEEeecc---------CCceeEEEeccCC--CCeEEEEcCCCcEEEEecCC
Q 021657 102 SSAQEFCSVGDD--SCLILWDARVGTSPVIKVEKAH---------DADLHCVDWNPLD--DNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 102 ~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~--~~~l~~~~~dg~i~i~d~~~ 168 (309)
..+.++++|+.. ..+.|||+++.+ .+..-+.- .-.++.+.|-+ . ...|++++.-+.+|+||.+.
T Consensus 159 ~~p~Iva~GGke~~n~lkiwdle~~~--qiw~aKNvpnD~L~LrVPvW~tdi~Fl~-g~~~~~fat~T~~hqvR~YDt~~ 235 (412)
T KOG3881|consen 159 TDPYIVATGGKENINELKIWDLEQSK--QIWSAKNVPNDRLGLRVPVWITDIRFLE-GSPNYKFATITRYHQVRLYDTRH 235 (412)
T ss_pred CCCceEecCchhcccceeeeecccce--eeeeccCCCCccccceeeeeeccceecC-CCCCceEEEEecceeEEEecCcc
Confidence 777888889988 899999998764 22221111 12467888887 6 78999999999999999996
Q ss_pred CCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee
Q 021657 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD 248 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 248 (309)
. .+|+..+.-...+++++...|.+.++ .+|..-|.+..||++. ++. ....+.+-.+.|.+
T Consensus 236 q-----RRPV~~fd~~E~~is~~~l~p~gn~I-y~gn~~g~l~~FD~r~-~kl-------------~g~~~kg~tGsirs 295 (412)
T KOG3881|consen 236 Q-----RRPVAQFDFLENPISSTGLTPSGNFI-YTGNTKGQLAKFDLRG-GKL-------------LGCGLKGITGSIRS 295 (412)
T ss_pred c-----CcceeEeccccCcceeeeecCCCcEE-EEecccchhheecccC-cee-------------eccccCCccCCcce
Confidence 4 78999999889999999999999975 5898999999999998 221 12336778899999
Q ss_pred EEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh
Q 021657 249 FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL 295 (309)
Q Consensus 249 ~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 295 (309)
+..+|..++++ ++|-|..|+|+|+. +.+++...
T Consensus 296 ih~hp~~~~la--------s~GLDRyvRIhD~k------trkll~kv 328 (412)
T KOG3881|consen 296 IHCHPTHPVLA--------SCGLDRYVRIHDIK------TRKLLHKV 328 (412)
T ss_pred EEEcCCCceEE--------eeccceeEEEeecc------cchhhhhh
Confidence 99999877655 66666999999999 55555443
No 209
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.73 E-value=4e-16 Score=124.08 Aligned_cols=241 Identities=17% Similarity=0.302 Sum_probs=153.5
Q ss_pred CCCcceEEEEECCCCCEE-EEecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 7 HQDNAEFALAMCPTEPYV-LSGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l-~t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
|.. +-+.|..+|||+|+ |||.+--.|++||+.+......-+ ............ ..+.+-.-++.
T Consensus 50 ~p~-ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~S----------K~v~L~~DR~I 118 (703)
T KOG2321|consen 50 MPT-ASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYS----------KSVFLQNDRTI 118 (703)
T ss_pred Ccc-ccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchh----------hheEeecCcee
Confidence 555 56899999999985 688889999999998652222111 111111111111 00111111111
Q ss_pred Ccccccccc-----cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 82 GPRGIYNGH-----EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 82 ~~~~~~~~~-----~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
+.....--| ...-.+++++..... |..++....|+=.+++.++ ....+......++++..++ ...+|++|+
T Consensus 119 efHak~G~hy~~RIP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGr--fL~P~~~~~~~lN~v~in~-~hgLla~Gt 194 (703)
T KOG2321|consen 119 EFHAKYGRHYRTRIPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGR--FLNPFETDSGELNVVSINE-EHGLLACGT 194 (703)
T ss_pred eehhhcCeeeeeecCcCCccccccCCCcc-EEEeecCcceEEEEccccc--cccccccccccceeeeecC-ccceEEecc
Confidence 111111111 122345666644424 4444445568888999988 6777777778999999999 889999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeec------cCCC-----CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFE------GHSA-----AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~------~~~~-----~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
.+|.|.+||.|. ...+..+. .+.+ .|+++.|+.+|-. +++|+.+|.+.|||++...+
T Consensus 195 ~~g~VEfwDpR~------ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~-~aVGts~G~v~iyDLRa~~p----- 262 (703)
T KOG2321|consen 195 EDGVVEFWDPRD------KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLH-VAVGTSTGSVLIYDLRASKP----- 262 (703)
T ss_pred cCceEEEecchh------hhhheeeecccccCCCccccccCcceEEEecCCcee-EEeeccCCcEEEEEcccCCc-----
Confidence 999999999998 44444443 2222 4999999999886 68999999999999998322
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCCCe-EEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPW-TVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK 297 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~ 297 (309)
.+..-.+..-+|..+.|.+.++. .+++... ..++|||-. .+++...++.
T Consensus 263 ---------l~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk--------~~~kiWd~~------~Gk~~asiEp 312 (703)
T KOG2321|consen 263 ---------LLVKDHGYELPIKKLDWQDTDQQNKVVSMDK--------RILKIWDEC------TGKPMASIEP 312 (703)
T ss_pred ---------eeecccCCccceeeecccccCCCceEEecch--------HHhhhcccc------cCCceeeccc
Confidence 23333445668999999876332 3433322 689999998 5666655553
No 210
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.72 E-value=1.4e-17 Score=137.70 Aligned_cols=204 Identities=20% Similarity=0.388 Sum_probs=151.8
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+.+..+.+|...|.|+.|...| .++++|++|..++||...+.. +.....+|...|+.++.+. +..++++++.|..|
T Consensus 181 k~ikrLlgH~naVyca~fDrtg-~~Iitgsdd~lvKiwS~et~~--~lAs~rGhs~ditdlavs~-~n~~iaaaS~D~vI 256 (1113)
T KOG0644|consen 181 KNIKRLLGHRNAVYCAIFDRTG-RYIITGSDDRLVKIWSMETAR--CLASCRGHSGDITDLAVSS-NNTMIAAASNDKVI 256 (1113)
T ss_pred HHHHHHHhhhhheeeeeecccc-ceEeecCccceeeeeeccchh--hhccCCCCccccchhccch-hhhhhhhcccCceE
Confidence 3456677999999999999998 899999999999999988887 7888899999999999998 88899999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC-ceeee--
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQ-- 238 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~-- 238 (309)
++|.+.. +.++..+.+|.+.|++|+|+|- ++.+.||++++||.+-...... +++..... .++..
T Consensus 257 rvWrl~~------~~pvsvLrghtgavtaiafsP~-----~sss~dgt~~~wd~r~~~~~y~--prp~~~~~~~~~~s~~ 323 (1113)
T KOG0644|consen 257 RVWRLPD------GAPVSVLRGHTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPRIYV--PRPLKFTEKDLVDSIL 323 (1113)
T ss_pred EEEecCC------CchHHHHhccccceeeeccCcc-----ccCCCCCceEeccccccccccC--CCCCCcccccceeeee
Confidence 9999999 9999999999999999999995 3778899999999982111111 11100000 00000
Q ss_pred --------------ecCCCcceeeEEEccCCCeEEEEecCCCC----CCCCCCeEEEEEccccccCChhhHhHhhhcccc
Q 021657 239 --------------HAGHRDKVVDFHWNASDPWTVVSVSDDCD----STGGGGTLQIWRMSDLIYRPQDEVLAELEKFKA 300 (309)
Q Consensus 239 --------------~~~~~~~v~~~~~~~~~~~~~~s~s~d~~----s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~ 300 (309)
........-.++|.. ...++++.+.|.. ++-.+-.+++|++. .+..+..+.+|.+
T Consensus 324 ~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~-~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~------~g~l~H~l~ghsd 396 (1113)
T KOG0644|consen 324 FENNGDRFLTGSRDGEARNHEFEQLAWRS-NLLIFVTRSSDLSSIVVTARNDHRLCVWNLY------TGQLLHNLMGHSD 396 (1113)
T ss_pred ccccccccccccCCcccccchhhHhhhhc-cceEEEeccccccccceeeeeeeEeeeeecc------cchhhhhhccccc
Confidence 000111223334433 2334444443311 24455788999999 7888999999999
Q ss_pred eEEEeeeCC
Q 021657 301 HVISCTSKP 309 (309)
Q Consensus 301 ~v~~~~~~P 309 (309)
.+..+.+||
T Consensus 397 ~~yvLd~Hp 405 (1113)
T KOG0644|consen 397 EVYVLDVHP 405 (1113)
T ss_pred ceeeeeecC
Confidence 999999998
No 211
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.72 E-value=1.9e-16 Score=124.85 Aligned_cols=166 Identities=17% Similarity=0.325 Sum_probs=124.6
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
+..|+++.|-|.++..|+.+-.+|.+.+||..-.. +-.. .+....+ ++..|.....-+ ..+
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~--------~~t~--p~~~~~k-~~~~f~i~t~ks------k~~-- 279 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVC--------GATA--PSYQALK-DGDQFAILTSKS------KKT-- 279 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccc--------cCCC--CcccccC-CCCeeEEeeeec------ccc--
Confidence 36899999999888889999999999999972111 0011 1122233 455554432211 111
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
..++..+.-..+.|+.++|+|||++ ||+.+.||.++|||+.+ ..++..++..-+...+++
T Consensus 280 ----rNPv~~w~~~~g~in~f~FS~DG~~-LA~VSqDGfLRvF~fdt---------------~eLlg~mkSYFGGLLCvc 339 (636)
T KOG2394|consen 280 ----RNPVARWHIGEGSINEFAFSPDGKY-LATVSQDGFLRIFDFDT---------------QELLGVMKSYFGGLLCVC 339 (636)
T ss_pred ----CCccceeEeccccccceeEcCCCce-EEEEecCceEEEeeccH---------------HHHHHHHHhhccceEEEE
Confidence 3456666656679999999999997 68999999999999998 344445555567899999
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
|+||+.+++ +||.|-.|.||.+. ..+.+..=++|+..|..|+|.|
T Consensus 340 WSPDGKyIv--------tGGEDDLVtVwSf~------erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 340 WSPDGKYIV--------TGGEDDLVTVWSFE------ERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EcCCccEEE--------ecCCcceEEEEEec------cceEEEeccccccceeeEeecc
Confidence 999999877 88888999999999 7888888899999999999987
No 212
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.72 E-value=6.9e-15 Score=117.96 Aligned_cols=213 Identities=9% Similarity=0.132 Sum_probs=130.6
Q ss_pred ceEEEEECCCCCEEEEe-cCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPTEPYVLSG-GKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
....++++|++++|+++ ..++.|.+|+++..-. ....... .
T Consensus 36 ~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~-------------------------------------l~~~~~~-~ 77 (330)
T PRK11028 36 QVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGA-------------------------------------LTFAAES-P 77 (330)
T ss_pred CCccEEECCCCCEEEEEECCCCcEEEEEECCCCc-------------------------------------eEEeeee-c
Confidence 35688999999988765 4588999999862100 0000101 1
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCCceeEEEeccCCCCeEE-EEcCCCcEEEEec
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDR 166 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~i~d~ 166 (309)
..+....+.|+|+++.++++...++.|.+|++.+.... ..... .+.....+++++| ++++++ +...++.|.+||+
T Consensus 78 ~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~ 155 (330)
T PRK11028 78 LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQII-EGLEGCHSANIDP-DNRTLWVPCLKEDRIRLFTL 155 (330)
T ss_pred CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeec-cCCCcccEeEeCC-CCCEEEEeeCCCCEEEEEEE
Confidence 12245689999999544555556899999999743211 12222 2334567889999 887775 4555799999999
Q ss_pred CCCCCCCC-CCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC----
Q 021657 167 RNLTSNGV-GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG---- 241 (309)
Q Consensus 167 ~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 241 (309)
.+...... ........ .......++|+|++++++++...++.|.+|+++...... ..+.....
T Consensus 156 ~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~-----------~~~~~~~~~p~~ 223 (330)
T PRK11028 156 SDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEI-----------ECVQTLDMMPAD 223 (330)
T ss_pred CCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCE-----------EEEEEEecCCCc
Confidence 76210000 00001122 133467899999999877666669999999997421110 01111111
Q ss_pred --CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 242 --HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 242 --~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+......+.++|++.+++++... ++.|.+|++..
T Consensus 224 ~~~~~~~~~i~~~pdg~~lyv~~~~-------~~~I~v~~i~~ 259 (330)
T PRK11028 224 FSDTRWAADIHITPDGRHLYACDRT-------ASLISVFSVSE 259 (330)
T ss_pred CCCCccceeEEECCCCCEEEEecCC-------CCeEEEEEEeC
Confidence 11234568999999988875433 38999999963
No 213
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.72 E-value=4.3e-16 Score=133.93 Aligned_cols=267 Identities=14% Similarity=0.178 Sum_probs=156.9
Q ss_pred CcccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCcccccc-ccCCccccc--------cCCCCceeecCCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSS-ATDPATAKS--------AGSSGSIIKQSPKPGD 70 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~ 70 (309)
|..|..|.. .|..++.++. +.+|+|||.||+|++||..+.+... ......... ...-.....++.+..+
T Consensus 1041 VAhL~Ehs~-~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1041 VAHLHEHSS-AVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKD 1119 (1431)
T ss_pred eehhhhccc-cccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCC
Confidence 356778998 6778888775 5999999999999999998653321 111111111 0011111122223556
Q ss_pred CCcccCCCCCcC-------ccccccc-ccCCeEEE-EEecCCCc-EEEEEcCCCeEEEEEcCCCCcceEEEeeccCCcee
Q 021657 71 GNDKAADGPSVG-------PRGIYNG-HEDTVEDV-TFCPSSAQ-EFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 140 (309)
Q Consensus 71 ~~~~~~~~~~~~-------~~~~~~~-~~~~v~~~-~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 140 (309)
|.+.+.+..... ....... ..+.+.+| +|...... .++.+...+.|..||+++...--........+.|+
T Consensus 1120 G~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vT 1199 (1431)
T KOG1240|consen 1120 GSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVT 1199 (1431)
T ss_pred CeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccccee
Confidence 666655544311 1111111 12334444 34333223 68888888999999998765322233334557899
Q ss_pred EEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec-cCCCCeeEEEEecCCC---cEEEEec-CCCcEEEEeC
Q 021657 141 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE-GHSAAVLCVQWSPDKS---SVFGSSA-EDGLLNIWDY 215 (309)
Q Consensus 141 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~---~l~~~~~-~dg~i~iwd~ 215 (309)
+++.+| .++++++|+..|.+.+||+|- ..++..+. .+..+++.+..+|-.+ ..+.+++ ..+.|.+|++
T Consensus 1200 Si~idp-~~~WlviGts~G~l~lWDLRF------~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~ 1272 (1431)
T KOG1240|consen 1200 SIVIDP-WCNWLVIGTSRGQLVLWDLRF------RVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNM 1272 (1431)
T ss_pred EEEecC-CceEEEEecCCceEEEEEeec------CceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeec
Confidence 999999 999999999999999999998 67777664 3456788888876443 3444444 5788999999
Q ss_pred CcccccccCCCCCcCCCCceee----eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 216 EKVGKKVEQGPRTTNYPAGLFF----QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
.+.................-.. ....+.-......+...++.++ +||.|+.|+.||...+
T Consensus 1273 ~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~l--------tggsd~kIR~wD~~~p 1336 (1431)
T KOG1240|consen 1273 ETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLL--------TGGSDMKIRKWDPTRP 1336 (1431)
T ss_pred ccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceee--------ecCCccceeeccCCCc
Confidence 8832221111110000000000 0001222233344444455556 7788899999998754
No 214
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.71 E-value=2.4e-14 Score=108.18 Aligned_cols=135 Identities=17% Similarity=0.266 Sum_probs=104.1
Q ss_pred ccCCCCCcCcccccc---cccCCeEEEEEecCCCcEEEE-E-cCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC
Q 021657 74 KAADGPSVGPRGIYN---GHEDTVEDVTFCPSSAQEFCS-V-GDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s-~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 148 (309)
+++++..++.+.++. .+...+.++.+++.+ .+++- + ...|.|.|||+.+-+ ....+..|++++-+++|++ +
T Consensus 109 yIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n-~ylAyp~s~t~GdV~l~d~~nl~--~v~~I~aH~~~lAalafs~-~ 184 (391)
T KOG2110|consen 109 YIYDIKDMKLLHTIETTPPNPKGLCALSPNNAN-CYLAYPGSTTSGDVVLFDTINLQ--PVNTINAHKGPLAALAFSP-D 184 (391)
T ss_pred EEEecccceeehhhhccCCCccceEeeccCCCC-ceEEecCCCCCceEEEEEcccce--eeeEEEecCCceeEEEECC-C
Confidence 333334555555443 345557767776665 55553 2 246899999998877 6788889999999999999 9
Q ss_pred CCeEEEEcCCCc-EEEEecCCCCCCCCCCceeeeccCC--CCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 149 DNLILTGSADNS-VRMFDRRNLTSNGVGSPINKFEGHS--AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 149 ~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
|.+||+++..|+ |||+.+.+ ++.+.+|.... ..|.+++|+|++.+ |++.+..++|++|.+....
T Consensus 185 G~llATASeKGTVIRVf~v~~------G~kl~eFRRG~~~~~IySL~Fs~ds~~-L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 185 GTLLATASEKGTVIRVFSVPE------GQKLYEFRRGTYPVSIYSLSFSPDSQF-LAASSNTETVHIFKLEKVS 251 (391)
T ss_pred CCEEEEeccCceEEEEEEcCC------ccEeeeeeCCceeeEEEEEEECCCCCe-EEEecCCCeEEEEEecccc
Confidence 999999999886 78999988 88998887443 45889999999996 5677888999999998743
No 215
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=5.6e-15 Score=111.37 Aligned_cols=230 Identities=14% Similarity=0.187 Sum_probs=143.4
Q ss_pred ceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc--cccc
Q 021657 11 AEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP--RGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 87 (309)
-|+|++|-|.+ .-|+.|.. +-|.+|............. .-+..+ +..-
T Consensus 142 nvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~----------------------------~~s~~~~qvl~~ 192 (445)
T KOG2139|consen 142 NVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIR----------------------------MMSTHHLQVLQD 192 (445)
T ss_pred ceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccc----------------------------cccccchhheeC
Confidence 58999999954 55666665 5688999764311111000 001111 1222
Q ss_pred ccccCCeEEEEEecCCCcEEEEEc-CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
.+| .+|++|+|++|| ..+++++ .|..|.|||..++...... ....+.++-+.|+| ++.+|+++..|+..++|..
T Consensus 193 pgh-~pVtsmqwn~dg-t~l~tAS~gsssi~iWdpdtg~~~pL~--~~glgg~slLkwSP-dgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 193 PGH-NPVTSMQWNEDG-TILVTASFGSSSIMIWDPDTGQKIPLI--PKGLGGFSLLKWSP-DGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred CCC-ceeeEEEEcCCC-CEEeecccCcceEEEEcCCCCCccccc--ccCCCceeeEEEcC-CCCEEEEecccceeeeehh
Confidence 345 689999999999 6677666 5788999999998843333 23456788999999 9999999999999999965
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee------c
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH------A 240 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------~ 240 (309)
... ....+ .....+.|...+|+|+|++||.+.+. .-++|.+...++..............++..+ .
T Consensus 268 ~q~-----wt~er-w~lgsgrvqtacWspcGsfLLf~~sg--sp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~a 339 (445)
T KOG2139|consen 268 NQS-----WTKER-WILGSGRVQTACWSPCGSFLLFACSG--SPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICA 339 (445)
T ss_pred ccc-----ceecc-eeccCCceeeeeecCCCCEEEEEEcC--CceEEEEeecCCCccccCcccceeeeeeccchhhhhhc
Confidence 542 33222 22345589999999999998877764 4556776654444332211111111111111 1
Q ss_pred C---CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 G---HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~---~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+ -.+++.+++|.|.|.+++++--...-.--.-..|.+||.+.
T Consensus 340 g~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~ 384 (445)
T KOG2139|consen 340 GQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRK 384 (445)
T ss_pred CcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccc
Confidence 1 13578899999999998875432100011124566777764
No 216
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.71 E-value=2.7e-15 Score=109.57 Aligned_cols=114 Identities=21% Similarity=0.432 Sum_probs=86.7
Q ss_pred ccCCeEEEEEecCCCcEEEE-EcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC---CcEEEEe
Q 021657 90 HEDTVEDVTFCPSSAQEFCS-VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD---NSVRMFD 165 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~i~d 165 (309)
..++|.+++|+|++..++++ |..++.|.+||++ .+ .+..+ +...+..+.|+| +|+++++++.+ |.|.+||
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~--~i~~~--~~~~~n~i~wsP-~G~~l~~~g~~n~~G~l~~wd 131 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GK--KIFSF--GTQPRNTISWSP-DGRFLVLAGFGNLNGDLEFWD 131 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-cc--EeEee--cCCCceEEEECC-CCCEEEEEEccCCCcEEEEEE
Confidence 34579999999999444333 4467899999996 33 34444 356778999999 99999998754 6799999
Q ss_pred cCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec-----CCCcEEEEeCCc
Q 021657 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA-----EDGLLNIWDYEK 217 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~dg~i~iwd~~~ 217 (309)
.++ .+.+...+. ..++.++|+|+|++++.+.+ .|+.++||++..
T Consensus 132 ~~~------~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 132 VRK------KKKISTFEH--SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred CCC------CEEeecccc--CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecC
Confidence 998 777877763 34789999999998765444 378899999864
No 217
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=1.1e-15 Score=116.50 Aligned_cols=170 Identities=13% Similarity=0.213 Sum_probs=133.7
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC-----cceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-----SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
+.+.+|.+.|+++.|+.++ ++|++|+.|..+++|++...- +++...-..|...|.|++|.. ...++++|..++
T Consensus 50 KD~~~H~GCiNAlqFS~N~-~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~-~N~~~~SG~~~~ 127 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHND-RFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL-ENRFLYSGERWG 127 (609)
T ss_pred hhhhhhccccceeeeccCC-eEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc-CCeeEecCCCcc
Confidence 4567899999999999997 999999999999999985421 122223345668999999998 888999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeecc--CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEG--HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+|...|+.+ .+.+..+.. ..+.|+.+..+|... +|++.+.++.|.+||.+....+ .. .+
T Consensus 128 ~VI~HDiEt------~qsi~V~~~~~~~~~VY~m~~~P~DN-~~~~~t~~~~V~~~D~Rd~~~~-----------~~-~~ 188 (609)
T KOG4227|consen 128 TVIKHDIET------KQSIYVANENNNRGDVYHMDQHPTDN-TLIVVTRAKLVSFIDNRDRQNP-----------IS-LV 188 (609)
T ss_pred eeEeeeccc------ceeeeeecccCcccceeecccCCCCc-eEEEEecCceEEEEeccCCCCC-----------Cc-ee
Confidence 999999998 666665542 345899999999876 5779999999999999973222 11 22
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...........+.|+|..+.|+++.+.. +-+.+||.+.
T Consensus 189 ~~AN~~~~F~t~~F~P~~P~Li~~~~~~-------~G~~~~D~R~ 226 (609)
T KOG4227|consen 189 LPANSGKNFYTAEFHPETPALILVNSET-------GGPNVFDRRM 226 (609)
T ss_pred eecCCCccceeeeecCCCceeEEecccc-------CCCCceeecc
Confidence 2233445678899999999999987776 8899999985
No 218
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=1.3e-15 Score=129.32 Aligned_cols=248 Identities=12% Similarity=0.161 Sum_probs=158.6
Q ss_pred ceEEEEECC--CCCEEEEecCCCcEEEEeCCccc-----cccccCCc--cccccCCCCceeecC-------CCCCCCCcc
Q 021657 11 AEFALAMCP--TEPYVLSGGKDKSVVLWSIQDHI-----TSSATDPA--TAKSAGSSGSIIKQS-------PKPGDGNDK 74 (309)
Q Consensus 11 ~V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~ 74 (309)
.|+.+.+-. |..++++|+.||.||||+--... ........ ......+.+.+..+- ....-..++
T Consensus 1111 ~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IR 1190 (1387)
T KOG1517|consen 1111 RVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIR 1190 (1387)
T ss_pred ccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEE
Confidence 477777754 45689999999999999843221 11111111 011111112111111 112246788
Q ss_pred cCCCCCcCcccccc-cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-eEEEeeccCCc--eeEEEeccCCCC
Q 021657 75 AADGPSVGPRGIYN-GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-VIKVEKAHDAD--LHCVDWNPLDDN 150 (309)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~--v~~~~~~~~~~~ 150 (309)
+||......+..+. +....|+++.-+..+++++++|..||.|++||.+..... .+...+.|... |..+.+.+ .|-
T Consensus 1191 IWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~-~G~ 1269 (1387)
T KOG1517|consen 1191 IWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQR-QGL 1269 (1387)
T ss_pred EEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeec-CCC
Confidence 99988877666554 344567777766555589999999999999999865421 34556678776 99999988 554
Q ss_pred -eEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC---CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCC
Q 021657 151 -LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH---SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 151 -~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~ 226 (309)
.|++|+.+|.|++||+|.... ....++..| .+..+++..+++.+ ++|+|+. +.|+||++.......- .
T Consensus 1270 ~elvSgs~~G~I~~~DlR~~~~----e~~~~iv~~~~yGs~lTal~VH~hap-iiAsGs~-q~ikIy~~~G~~l~~~--k 1341 (1387)
T KOG1517|consen 1270 GELVSGSQDGDIQLLDLRMSSK----ETFLTIVAHWEYGSALTALTVHEHAP-IIASGSA-QLIKIYSLSGEQLNII--K 1341 (1387)
T ss_pred cceeeeccCCeEEEEecccCcc----cccceeeeccccCccceeeeeccCCC-eeeecCc-ceEEEEecChhhhccc--c
Confidence 599999999999999998421 222222222 23589999999998 6888887 9999999976221110 0
Q ss_pred CCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 227 RTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
. ....+ .-....+.+++|+|... ++| .|..|..|.||...+
T Consensus 1342 ~----n~~F~---~q~~gs~scL~FHP~~~-llA-------aG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1342 Y----NPGFM---GQRIGSVSCLAFHPHRL-LLA-------AGSADSTVSIYSCEK 1382 (1387)
T ss_pred c----Ccccc---cCcCCCcceeeecchhH-hhh-------hccCCceEEEeecCC
Confidence 0 00011 11234569999999655 455 444559999999873
No 219
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=8.9e-15 Score=121.82 Aligned_cols=249 Identities=14% Similarity=0.195 Sum_probs=161.0
Q ss_pred cccCCCCCcceEEEEECCCC---CEEEEecCCCcEEEEeCCccccccccCCcccc--------ccCCCCceeecCC----
Q 021657 2 EILTGHQDNAEFALAMCPTE---PYVLSGGKDKSVVLWSIQDHITSSATDPATAK--------SAGSSGSIIKQSP---- 66 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~---~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---- 66 (309)
+.|.+|.. +++.+.+.|.. .++++++.||.|++||...+.....+...... ....... .....
T Consensus 51 ~~l~~~~a-~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~-~~~s~~~~~ 128 (792)
T KOG1963|consen 51 TSLEDHTA-PLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISAN-VYVSVEDYS 128 (792)
T ss_pred hhcccccC-ccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccce-eEeecccce
Confidence 56889999 89999999864 46789999999999999887433322211110 0000000 00000
Q ss_pred ------CCCCCCcccCC--CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce--EEEeeccC
Q 021657 67 ------KPGDGNDKAAD--GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV--IKVEKAHD 136 (309)
Q Consensus 67 ------~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~ 136 (309)
.......+-.. .........+.+|.. -..+.+++.+ .+.. ...+..+.+|+..+..+.. ...-..|.
T Consensus 129 ~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~g-e~~~-i~~~~~~~~~~v~~~~~~~~~~~~~~~Ht 205 (792)
T KOG1963|consen 129 ILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSG-EFKG-IVHMCKIHIYFVPKHTKHTSSRDITVHHT 205 (792)
T ss_pred eeeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEcCCc-eEEE-EEEeeeEEEEEecccceeeccchhhhhhc
Confidence 00001111111 111112222333433 4567788877 5443 3456679999987744111 11223566
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
..+++.+++| +++++++|..||.|.+|.--.. .........+..|...|++++|+++|.+|+ +|+..|.+.+|.+.
T Consensus 206 f~~t~~~~sp-n~~~~Aa~d~dGrI~vw~d~~~--~~~~~t~t~lHWH~~~V~~L~fS~~G~~Ll-SGG~E~VLv~Wq~~ 281 (792)
T KOG1963|consen 206 FNITCVALSP-NERYLAAGDSDGRILVWRDFGS--SDDSETCTLLHWHHDEVNSLSFSSDGAYLL-SGGREGVLVLWQLE 281 (792)
T ss_pred ccceeEEecc-ccceEEEeccCCcEEEEecccc--ccccccceEEEecccccceeEEecCCceEe-ecccceEEEEEeec
Confidence 7799999999 9999999999999999953320 011455677888999999999999999865 99999999999999
Q ss_pred cccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
+.++. -+.--.++|..+.++|++....+... |+.|.+-...++
T Consensus 282 T~~kq----------------fLPRLgs~I~~i~vS~ds~~~sl~~~--------DNqI~li~~~dl 324 (792)
T KOG1963|consen 282 TGKKQ----------------FLPRLGSPILHIVVSPDSDLYSLVLE--------DNQIHLIKASDL 324 (792)
T ss_pred CCCcc----------------cccccCCeeEEEEEcCCCCeEEEEec--------CceEEEEeccch
Confidence 84422 12334578999999999987775444 479999998754
No 220
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=5.4e-14 Score=116.88 Aligned_cols=224 Identities=11% Similarity=0.089 Sum_probs=134.2
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCC---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+..|.. .+....|+|||+.|+..+.+ ..|.+||+.++...
T Consensus 194 l~~~~~-~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~------------------------------------ 236 (430)
T PRK00178 194 LLQSRE-PILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE------------------------------------ 236 (430)
T ss_pred EecCCC-ceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE------------------------------------
Confidence 444555 67889999999988765543 35888888753111
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-C
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS-A 157 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~ 157 (309)
.+....+.+....|+|+|..++++...+| .|.+||+.+++ ...+..+........|+| +++.++..+ .
T Consensus 237 -----~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~~sp-Dg~~i~f~s~~ 307 (430)
T PRK00178 237 -----QITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ---LSRVTNHPAIDTEPFWGK-DGRTLYFTSDR 307 (430)
T ss_pred -----EccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC---eEEcccCCCCcCCeEECC-CCCEEEEEECC
Confidence 11112233446899999955555665555 68888988776 233444555667789999 887666554 3
Q ss_pred CC--cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCCC
Q 021657 158 DN--SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 158 dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
+| .|+++|+.+ ++. ..+...........|+|+|++++.+...++ .|.+||+... +..
T Consensus 308 ~g~~~iy~~d~~~------g~~-~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg-~~~----------- 368 (430)
T PRK00178 308 GGKPQIYKVNVNG------GRA-ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRG-SVR----------- 368 (430)
T ss_pred CCCceEEEEECCC------CCE-EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCC-CEE-----------
Confidence 44 577777765 432 222212223345789999998765554444 4777887652 111
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+. +........|+|++..++.+...+ ....|.++++. +.....+..+.+.+...+|+|
T Consensus 369 -~lt----~~~~~~~p~~spdg~~i~~~~~~~-----g~~~l~~~~~~-------g~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 369 -ILT----DTSLDESPSVAPNGTMLIYATRQQ-----GRGVLMLVSIN-------GRVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred -Ecc----CCCCCCCceECCCCCEEEEEEecC-----CceEEEEEECC-------CCceEECcCCCCCcCCCccCC
Confidence 111 111223468999999887765432 12456666665 222334444556677777876
No 221
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.66 E-value=1.2e-14 Score=108.93 Aligned_cols=209 Identities=20% Similarity=0.350 Sum_probs=136.9
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcc-cccc---ccCCccccccCCCCceeecCCCCCCCCcc--
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH-ITSS---ATDPATAKSAGSSGSIIKQSPKPGDGNDK-- 74 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 74 (309)
++.++||.+ .|+....-|-.+-+++.+.|.++|||--.+. .... ...+..............+..+...+.+.
T Consensus 17 l~~~eG~~d-~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtef 95 (404)
T KOG1409|consen 17 LSKIEGSQD-DVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEF 95 (404)
T ss_pred hhhhcCchh-hhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEE
Confidence 357889999 8899888888888999999999999975543 1111 11111111111111111111111111111
Q ss_pred --cCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEE-----------------------------------
Q 021657 75 --AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI----------------------------------- 117 (309)
Q Consensus 75 --~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~----------------------------------- 117 (309)
.-+.+.....+....|...|..+-|+... ..+++.+.|..+.
T Consensus 96 s~sedfnkm~~~r~~~~h~~~v~~~if~~~~-e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~ 174 (404)
T KOG1409|consen 96 ALSEDFNKMTFLKDYLAHQARVSAIVFSLTH-EWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHS 174 (404)
T ss_pred EhhhhhhhcchhhhhhhhhcceeeEEecCCc-eeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccc
Confidence 11233444555666788888888777655 4566666554332
Q ss_pred ----EEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEE
Q 021657 118 ----LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQW 193 (309)
Q Consensus 118 ----iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 193 (309)
+-.+.......+..+.+|.+++.+++|.| ....|++|..|..+.+||+.-. ......+.+|...|..+..
T Consensus 175 gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~-~~~~LfSg~~d~~vi~wdigg~-----~g~~~el~gh~~kV~~l~~ 248 (404)
T KOG1409|consen 175 GQITMLKLEQNGCQLITTFNGHTGEVTCLKWDP-GQRLLFSGASDHSVIMWDIGGR-----KGTAYELQGHNDKVQALSY 248 (404)
T ss_pred cceEEEEEeecCCceEEEEcCcccceEEEEEcC-CCcEEEeccccCceEEEeccCC-----cceeeeeccchhhhhhhhh
Confidence 11111122235667789999999999999 8999999999999999999863 3456677889999999988
Q ss_pred ecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 194 SPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 194 ~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
.+--+.++ +++.||.|.+|+++..
T Consensus 249 ~~~t~~l~-S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 249 AQHTRQLI-SCGEDGGIVVWNMNVK 272 (404)
T ss_pred hhhheeee-eccCCCeEEEEeccce
Confidence 88777654 8999999999999873
No 222
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=1e-14 Score=120.55 Aligned_cols=159 Identities=18% Similarity=0.267 Sum_probs=106.6
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCC---CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-CCCcE
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDD---SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS-ADNSV 161 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i 161 (309)
.+..|...+.+..|+|+| +.|+..+.+ ..|++||+.+++......+. .....++|+| +++.|+.+. .+|.+
T Consensus 198 ~lt~~~~~v~~p~wSPDG-~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~---g~~~~~~wSP-DG~~La~~~~~~g~~ 272 (429)
T PRK01742 198 IVNRSSQPLMSPAWSPDG-SKLAYVSFENKKSQLVVHDLRSGARKVVASFR---GHNGAPAFSP-DGSRLAFASSKDGVL 272 (429)
T ss_pred EeccCCCccccceEcCCC-CEEEEEEecCCCcEEEEEeCCCCceEEEecCC---CccCceeECC-CCCEEEEEEecCCcE
Confidence 445677789999999999 556655432 47999999877632333333 3345789999 898877764 68876
Q ss_pred EEE--ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 162 RMF--DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 162 ~i~--d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|| |+.+ + .+..+..+...+...+|+|||+.++.++..++...||+++..+... ..+
T Consensus 273 ~Iy~~d~~~------~-~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~--------------~~l 331 (429)
T PRK01742 273 NIYVMGANG------G-TPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA--------------SLV 331 (429)
T ss_pred EEEEEECCC------C-CeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe--------------EEe
Confidence 665 5543 3 3455666666788999999999877676678889999886522211 111
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+.. ....|+|++.++++++. + .+.+||+..
T Consensus 332 -~~~~--~~~~~SpDG~~ia~~~~-~--------~i~~~Dl~~ 362 (429)
T PRK01742 332 -GGRG--YSAQISADGKTLVMING-D--------NVVKQDLTS 362 (429)
T ss_pred -cCCC--CCccCCCCCCEEEEEcC-C--------CEEEEECCC
Confidence 2222 45789999998765433 2 456689873
No 223
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.65 E-value=6.6e-14 Score=116.19 Aligned_cols=223 Identities=13% Similarity=0.151 Sum_probs=135.9
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCC---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
.|..+.. .+.+.+|+|||++|+.++.+ ..|++||+.++..
T Consensus 184 ~l~~~~~-~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~------------------------------------ 226 (417)
T TIGR02800 184 TITRSRE-PILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQR------------------------------------ 226 (417)
T ss_pred EeecCCC-ceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE------------------------------------
Confidence 3444555 67889999999999876643 4799999875311
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..+..+...+.++.|+|++..++++.+.++ .|.+||+.++. ...+..+........|+| +++.|+..+.
T Consensus 227 -----~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~s~-dg~~l~~~s~ 297 (417)
T TIGR02800 227 -----EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ---LTRLTNGPGIDTEPSWSP-DGKSIAFTSD 297 (417)
T ss_pred -----EEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCC---EEECCCCCCCCCCEEECC-CCCEEEEEEC
Confidence 112223445567899999955556666554 58888987765 233334445556789999 8887766544
Q ss_pred -CC--cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCC
Q 021657 158 -DN--SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 158 -dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
++ .|+++|+.. ++ ...+..+......+.|+|++++++.+....+ .|.+||+.. +..
T Consensus 298 ~~g~~~iy~~d~~~------~~-~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~-~~~----------- 358 (417)
T TIGR02800 298 RGGSPQIYMMDADG------GE-VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG-GGE----------- 358 (417)
T ss_pred CCCCceEEEEECCC------CC-EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC-CCe-----------
Confidence 33 577778765 33 3344434556778899999997654443332 677888765 111
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
..+ .. ........|+|++..++++...+ ....+.+.+.. ++....+..+.+.+...+|
T Consensus 359 -~~l---~~-~~~~~~p~~spdg~~l~~~~~~~-----~~~~l~~~~~~-------g~~~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 359 -RVL---TD-TGLDESPSFAPNGRMILYATTRG-----GRGVLGLVSTD-------GRFRARLPLGNGDVREPAW 416 (417)
T ss_pred -EEc---cC-CCCCCCceECCCCCEEEEEEeCC-----CcEEEEEEECC-------CceeeECCCCCCCcCCCCC
Confidence 011 11 11234568999999877766543 12356666654 3333444444455555555
No 224
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.65 E-value=4.3e-14 Score=113.00 Aligned_cols=190 Identities=16% Similarity=0.212 Sum_probs=152.2
Q ss_pred CCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCc-------------------------eeecCCCCCCCC
Q 021657 18 CPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGS-------------------------IIKQSPKPGDGN 72 (309)
Q Consensus 18 ~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~ 72 (309)
.|-..++|....||.+|+|+...+.....+.+........... ...+..+...+.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 3456799999999999999999886666555543332222111 122333455677
Q ss_pred cccCCCCCcCcccccc--cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCC
Q 021657 73 DKAADGPSVGPRGIYN--GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN 150 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 150 (309)
+.+++...++....+. .|.+.|+++.++.+- ..|.+++.|+.+..|+....+ ........+..+.+++++| ++.
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~-~ciyS~~ad~~v~~~~~~~~~--~~~~~~~~~~~~~sl~is~-D~~ 157 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRL-GCIYSVGADLKVVYILEKEKV--IIRIWKEQKPLVSSLCISP-DGK 157 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeeccccc-CceEecCCceeEEEEecccce--eeeeeccCCCccceEEEcC-CCC
Confidence 7888877777766664 689999999998876 789999999999999998877 7788888889999999999 899
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecC-----CCcEEEEecCCCcEEEEeCCccc
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD-----KSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
.+++++ ++|.+||+.+ ++.+..|.+|.++|++++|--+ |.++|.+...+.-+.+|-+....
T Consensus 158 ~l~~as--~~ik~~~~~~------kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~ 223 (541)
T KOG4547|consen 158 ILLTAS--RQIKVLDIET------KEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKED 223 (541)
T ss_pred EEEecc--ceEEEEEccC------ceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEccc
Confidence 999876 6899999999 9999999999999999999887 88888777778889999887733
No 225
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.64 E-value=6.6e-14 Score=104.50 Aligned_cols=270 Identities=10% Similarity=0.079 Sum_probs=162.7
Q ss_pred EEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc--ccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 14 ALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK--SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
-++|||+|+++|+++.- .+.|=|.++.....-+...... ..-.......+-....+..+.+|+....+-...+....
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~ 91 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQ 91 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCC
Confidence 46899999999999876 7778787764222111110000 00001111122223345678888888877777788888
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC------------
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN------------ 159 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------------ 159 (309)
..+..++|+|+|+.+|.+...|-.|.+|.+.+.+ ...+.-.+..+..++|+| ++++.+..++-.
T Consensus 92 agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~---~~~~~~pK~~~kg~~f~~-dg~f~ai~sRrDCkdyv~i~~c~~ 167 (447)
T KOG4497|consen 92 AGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK---GYLLPHPKTNVKGYAFHP-DGQFCAILSRRDCKDYVQISSCKA 167 (447)
T ss_pred CcceeeeECCCcceEeeeecceeEEEEEEeccce---eEEecccccCceeEEECC-CCceeeeeecccHHHHHHHHhhHH
Confidence 8999999999998888888899999999998876 223333345668889999 888888776421
Q ss_pred ------------------------cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 160 ------------------------SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 160 ------------------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
.+-+||--- .-.+..++ ..-.+..++|+|.+++ ++.|+.|+.+++-+-
T Consensus 168 W~ll~~f~~dT~DltgieWsPdg~~laVwd~~L------eykv~aYe-~~lG~k~v~wsP~~qf-lavGsyD~~lrvlnh 239 (447)
T KOG4497|consen 168 WILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVL------EYKVYAYE-RGLGLKFVEWSPCNQF-LAVGSYDQMLRVLNH 239 (447)
T ss_pred HHHHHhcCCCcccccCceECCCCcEEEEecchh------hheeeeee-eccceeEEEeccccce-EEeeccchhhhhhce
Confidence 122222111 11111111 2346788999999984 789999999887543
Q ss_pred Cccc---ccccCC----CC-----------------CcC-----------CC----------Cceee------eecCCCc
Q 021657 216 EKVG---KKVEQG----PR-----------------TTN-----------YP----------AGLFF------QHAGHRD 244 (309)
Q Consensus 216 ~~~~---~~~~~~----~~-----------------~~~-----------~~----------~~~~~------~~~~~~~ 244 (309)
-+.+ +-.... +. ... .. ...+. .+.....
T Consensus 240 ~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~ 319 (447)
T KOG4497|consen 240 FTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKC 319 (447)
T ss_pred eeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCccc
Confidence 2211 100000 00 000 00 00111 1112234
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+--++|++|.. ++++-.+ ..-+.+-+||++ ..+....+ ....+|....|+|
T Consensus 320 g~g~lafs~Ds~-y~aTrnd-----~~PnalW~Wdlq------~l~l~avL-iQk~piraf~WdP 371 (447)
T KOG4497|consen 320 GAGKLAFSCDST-YAATRND-----KYPNALWLWDLQ------NLKLHAVL-IQKHPIRAFEWDP 371 (447)
T ss_pred ccceeeecCCce-EEeeecC-----CCCceEEEEech------hhhhhhhh-hhccceeEEEeCC
Confidence 577899999665 4555433 245789999998 44444444 3567899888887
No 226
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.64 E-value=8.1e-14 Score=116.24 Aligned_cols=169 Identities=18% Similarity=0.298 Sum_probs=126.7
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
.|.- .++|.++||+++++|+|..||+|.+|.--.. -.......
T Consensus 203 ~Htf-~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~------------------------------------~~~~~t~t 245 (792)
T KOG1963|consen 203 HHTF-NITCVALSPNERYLAAGDSDGRILVWRDFGS------------------------------------SDDSETCT 245 (792)
T ss_pred hhcc-cceeEEeccccceEEEeccCCcEEEEecccc------------------------------------ccccccce
Confidence 3666 5899999999999999999999999974320 00112234
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
.+.-|...|+++.|+++| .+|.+|+..|.+.+|.+.+++ .+.+..-.++|..+.++| ++.+.+....|+.|.+..
T Consensus 246 ~lHWH~~~V~~L~fS~~G-~~LlSGG~E~VLv~Wq~~T~~---kqfLPRLgs~I~~i~vS~-ds~~~sl~~~DNqI~li~ 320 (792)
T KOG1963|consen 246 LLHWHHDEVNSLSFSSDG-AYLLSGGREGVLVLWQLETGK---KQFLPRLGSPILHIVVSP-DSDLYSLVLEDNQIHLIK 320 (792)
T ss_pred EEEecccccceeEEecCC-ceEeecccceEEEEEeecCCC---cccccccCCeeEEEEEcC-CCCeEEEEecCceEEEEe
Confidence 567788999999999999 889999999999999999888 344555678999999999 999999999999999998
Q ss_pred cCCCCCCCCCCceeeecc--------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccc
Q 021657 166 RRNLTSNGVGSPINKFEG--------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
..++.. ...+..+.. ..+-.+.++++|.-+ .++-.+..|.|.+||+-+...
T Consensus 321 ~~dl~~---k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~-~~vln~~~g~vQ~ydl~td~~ 379 (792)
T KOG1963|consen 321 ASDLEI---KSTISGIKPPTPSTKTRPQSLTTGVSIDPRTN-SLVLNGHPGHVQFYDLYTDST 379 (792)
T ss_pred ccchhh---hhhccCccCCCccccccccccceeEEEcCCCC-ceeecCCCceEEEEeccccce
Confidence 765321 111111111 133456788888444 355778899999999876443
No 227
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.64 E-value=7.3e-14 Score=115.77 Aligned_cols=218 Identities=15% Similarity=0.150 Sum_probs=130.2
Q ss_pred ceEEEEECCCCCEEEEecC-CC--cEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCPTEPYVLSGGK-DK--SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
.+.+..|+|||+.|+..+. ++ .|.+||+.++... .+..+
T Consensus 219 ~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~--------------------------------------~lt~~ 260 (448)
T PRK04792 219 PLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE--------------------------------------KVTSF 260 (448)
T ss_pred cccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeE--------------------------------------EecCC
Confidence 5678899999998886543 33 5777787643110 11111
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCe--EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-CC--cEE
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSC--LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DN--SVR 162 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg--~i~ 162 (309)
.+......|+|+|..++++.+.+|. |.++|+.+++ ...+..+.......+|+| +++.++..+. ++ .|+
T Consensus 261 ---~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~---~~~lt~~~~~~~~p~wSp-DG~~I~f~s~~~g~~~Iy 333 (448)
T PRK04792 261 ---PGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA---LTRITRHRAIDTEPSWHP-DGKSLIFTSERGGKPQIY 333 (448)
T ss_pred ---CCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC---eEECccCCCCccceEECC-CCCEEEEEECCCCCceEE
Confidence 1223467899999656566667775 7777887665 333444555667889999 8887765543 44 466
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEE--EeCCcccccccCCCCCcCCCCceeeeec
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI--WDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
++|+.+ ++. ..+..........+|+|||++++.+...++...| +|+.. ++. ..+ .
T Consensus 334 ~~dl~~------g~~-~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~-g~~------------~~l---t 390 (448)
T PRK04792 334 RVNLAS------GKV-SRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLET-GAM------------QVL---T 390 (448)
T ss_pred EEECCC------CCE-EEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCC-CCe------------EEc---c
Confidence 667765 432 2222122233457899999987766655665555 55544 111 011 1
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.. .......|+|++..++.+...+ ....+.+++.. +.....+..+.+.+...+|+|
T Consensus 391 ~~-~~d~~ps~spdG~~I~~~~~~~-----g~~~l~~~~~~-------G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 391 ST-RLDESPSVAPNGTMVIYSTTYQ-----GKQVLAAVSID-------GRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred CC-CCCCCceECCCCCEEEEEEecC-----CceEEEEEECC-------CCceEECcCCCCCcCCCccCC
Confidence 11 1122457999999887766543 12346666664 444555665666778888887
No 228
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.63 E-value=1e-12 Score=97.69 Aligned_cols=238 Identities=12% Similarity=0.179 Sum_probs=149.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC--Cccc--cccCCCCceeecCCCC-----CCCCcccCCCCCc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD--PATA--KSAGSSGSIIKQSPKP-----GDGNDKAADGPSV 81 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 81 (309)
...+++|+.|..-++.|..+ -.|||+++.-....... .... ...-....+..+..+. ....+.+||-...
T Consensus 7 ~~lsvs~NQD~ScFava~~~-Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~ 85 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDT-GFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE 85 (346)
T ss_pred ceeEEEEccCCceEEEEecC-ceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence 45679999999888887765 57899987532111110 0000 0000111111111121 2356788887777
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC-CeEEE-EcCCC
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILT-GSADN 159 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~-~~~dg 159 (309)
+++..+. ...+|.++.+.++. +++. ..+.|.||.....-+ ....+.....+---++..|... .+||. |-.-|
T Consensus 86 ~~i~el~-f~~~I~~V~l~r~r---iVvv-l~~~I~VytF~~n~k-~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~G 159 (346)
T KOG2111|consen 86 RCIIELS-FNSEIKAVKLRRDR---IVVV-LENKIYVYTFPDNPK-LLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTG 159 (346)
T ss_pred cEEEEEE-eccceeeEEEcCCe---EEEE-ecCeEEEEEcCCChh-heeeeecccCCCceEeecCCCCceEEEcCCCccc
Confidence 7766654 56789999998753 4444 457899999874332 3333322221211333444223 34443 34569
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc-EEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.|.|-|+.... ......+.+|.+.|.+++++.+|. ++|+++..|+ |||||..+ +. ++.+
T Consensus 160 qvQi~dL~~~~----~~~p~~I~AH~s~Iacv~Ln~~Gt-~vATaStkGTLIRIFdt~~-g~--------------~l~E 219 (346)
T KOG2111|consen 160 QVQIVDLASTK----PNAPSIINAHDSDIACVALNLQGT-LVATASTKGTLIRIFDTED-GT--------------LLQE 219 (346)
T ss_pred eEEEEEhhhcC----cCCceEEEcccCceeEEEEcCCcc-EEEEeccCcEEEEEEEcCC-Cc--------------Eeee
Confidence 99999998732 113467889999999999999999 6899999998 89999998 32 3333
Q ss_pred ec--CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 239 HA--GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 239 ~~--~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
+. .....|++++|+|+..+ ++.+|+. |+|+||.+.+.
T Consensus 220 ~RRG~d~A~iy~iaFSp~~s~-LavsSdK-------gTlHiF~l~~~ 258 (346)
T KOG2111|consen 220 LRRGVDRADIYCIAFSPNSSW-LAVSSDK-------GTLHIFSLRDT 258 (346)
T ss_pred eecCCchheEEEEEeCCCccE-EEEEcCC-------CeEEEEEeecC
Confidence 32 24457999999998775 5555655 99999999863
No 229
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=7.1e-13 Score=109.09 Aligned_cols=185 Identities=12% Similarity=0.110 Sum_probs=106.6
Q ss_pred CeEEEEEecCCCcEEEEEcCCC----eEEEEEcCCCC-cceEEEeeccCCceeEEEeccCCCCeEEEEc-CCCcEEEEec
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDS----CLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDDNLILTGS-ADNSVRMFDR 166 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~ 166 (309)
......|+|||..++++...+| .+.+|++..+. .................+|+| +++.|+..+ .+|...+|.+
T Consensus 232 ~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSP-DG~~Laf~s~~~g~~~ly~~ 310 (428)
T PRK01029 232 NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSP-DGTRLVFVSNKDGRPRIYIM 310 (428)
T ss_pred CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECC-CCCEEEEEECCCCCceEEEE
Confidence 3446799999955555544333 34457766532 112222222233456789999 888766554 4675555543
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC--CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED--GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
..... +.....+......+....|+|||++++.+...+ ..|.+||+... +. ..+.....
T Consensus 311 ~~~~~---g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g-~~---------------~~Lt~~~~ 371 (428)
T PRK01029 311 QIDPE---GQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATG-RD---------------YQLTTSPE 371 (428)
T ss_pred ECccc---ccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCC-Ce---------------EEccCCCC
Confidence 32100 223344444445667889999999866555443 36888998762 11 11122223
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+....|+|++..++.+...+ .+..|.+||+.. ++. ..+....+.+...+|+|
T Consensus 372 ~~~~p~wSpDG~~L~f~~~~~-----g~~~L~~vdl~~------g~~-~~Lt~~~g~~~~p~Ws~ 424 (428)
T PRK01029 372 NKESPSWAIDSLHLVYSAGNS-----NESELYLISLIT------KKT-RKIVIGSGEKRFPSWGA 424 (428)
T ss_pred CccceEECCCCCEEEEEECCC-----CCceEEEEECCC------CCE-EEeecCCCcccCceecC
Confidence 456789999999887765432 346788889872 322 22333445566677766
No 230
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.60 E-value=4.2e-15 Score=115.43 Aligned_cols=188 Identities=11% Similarity=0.145 Sum_probs=136.2
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.|+.|.. |..+.|-|.--+|++++..|.++.-|+. .++
T Consensus 205 Clk~~~~--v~rLeFLPyHfLL~~~~~~G~L~Y~DVS----------------------------------------~Gk 242 (545)
T KOG1272|consen 205 CLKRHIR--VARLEFLPYHFLLVAASEAGFLKYQDVS----------------------------------------TGK 242 (545)
T ss_pred ehhhcCc--hhhhcccchhheeeecccCCceEEEeec----------------------------------------hhh
Confidence 4444443 5666676666666677777777666665 566
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.+..+....+.+..|+-+|-+ ..+-+|...|+|.+|.....+ ....+..|.++|.++++.+ +|+++++.+.|..++
T Consensus 243 lVa~~~t~~G~~~vm~qNP~N-aVih~GhsnGtVSlWSP~ske--PLvKiLcH~g~V~siAv~~-~G~YMaTtG~Dr~~k 318 (545)
T KOG1272|consen 243 LVASIRTGAGRTDVMKQNPYN-AVIHLGHSNGTVSLWSPNSKE--PLVKILCHRGPVSSIAVDR-GGRYMATTGLDRKVK 318 (545)
T ss_pred hhHHHHccCCccchhhcCCcc-ceEEEcCCCceEEecCCCCcc--hHHHHHhcCCCcceEEECC-CCcEEeeccccccee
Confidence 677777778889999999987 789999999999999987766 4555668999999999999 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
|||+|+ ...+.++.. ..+...+++|..| +||. +....+.||.=...+.... ..+..... -
T Consensus 319 IWDlR~------~~ql~t~~t-p~~a~~ls~Sqkg--lLA~-~~G~~v~iw~d~~~~s~~~---------~~pYm~H~-~ 378 (545)
T KOG1272|consen 319 IWDLRN------FYQLHTYRT-PHPASNLSLSQKG--LLAL-SYGDHVQIWKDALKGSGHG---------ETPYMNHR-C 378 (545)
T ss_pred Eeeecc------ccccceeec-CCCcccccccccc--ceee-ecCCeeeeehhhhcCCCCC---------Ccchhhhc-c
Confidence 999999 666666664 5667889999888 4644 4456799996433221111 11111111 1
Q ss_pred CcceeeEEEccCCC
Q 021657 243 RDKVVDFHWNASDP 256 (309)
Q Consensus 243 ~~~v~~~~~~~~~~ 256 (309)
..+|..+.|.|-.+
T Consensus 379 ~~~V~~l~FcP~ED 392 (545)
T KOG1272|consen 379 GGPVEDLRFCPYED 392 (545)
T ss_pred CcccccceeccHHH
Confidence 23788888888654
No 231
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.60 E-value=3.8e-12 Score=94.71 Aligned_cols=102 Identities=24% Similarity=0.448 Sum_probs=87.5
Q ss_pred EcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc-EEEEecCCCCCCCCCCceeeeccC--CC
Q 021657 110 VGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS-VRMFDRRNLTSNGVGSPINKFEGH--SA 186 (309)
Q Consensus 110 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~--~~ 186 (309)
|-.-|.|.|-|+...+........+|...|.|++.+. +|..+|+++..|+ |||||..+ +.++.++... ..
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~-~Gt~vATaStkGTLIRIFdt~~------g~~l~E~RRG~d~A 227 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNL-QGTLVATASTKGTLIRIFDTED------GTLLQELRRGVDRA 227 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcC-CccEEEEeccCcEEEEEEEcCC------CcEeeeeecCCchh
Confidence 4456999999998776433577789999999999999 9999999999996 78999999 8999988643 45
Q ss_pred CeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
.|.+|+|+|+..+ +|++++.|+++||.++...
T Consensus 228 ~iy~iaFSp~~s~-LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 228 DIYCIAFSPNSSW-LAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred eEEEEEeCCCccE-EEEEcCCCeEEEEEeecCC
Confidence 6999999999996 6799999999999998743
No 232
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.60 E-value=1e-13 Score=101.84 Aligned_cols=176 Identities=19% Similarity=0.248 Sum_probs=130.1
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.++.++.|.-+++...|+...++++.+|++|+.+.-||++..+.-.....+-|...|.++.-+|..+.++++|+.|-.|+
T Consensus 157 ~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~ 236 (339)
T KOG0280|consen 157 KVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIR 236 (339)
T ss_pred ecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEecccccee
Confidence 35578889999999999988889999999999999999995543233445678899999999886788999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+||.|++ ++++..-. ..+.|..+.++|.-...+..++.-+-.+|-++....... ...+.....|
T Consensus 237 ~~DtRnm-----~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~----------~~~~~s~~~h 300 (339)
T KOG0280|consen 237 VLDTRNM-----GKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEF----------QIVLPSDKIH 300 (339)
T ss_pred eeehhcc-----cCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEEEecccccch----------heeeeccccc
Confidence 9999976 67766554 347899999999655433455555567888877632221 1234556778
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEE-EEEcc
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQ-IWRMS 281 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~-vw~~~ 281 (309)
.+-++.-.|... ..++++||. .|+.++ +|-.-
T Consensus 301 dSl~YG~DWd~~-~~~lATCsF------YDk~~~~~Wl~~ 333 (339)
T KOG0280|consen 301 DSLCYGGDWDSK-DSFLATCSF------YDKKIRQLWLHI 333 (339)
T ss_pred cceeeccccccc-cceeeeeec------cccceeeeeeec
Confidence 888888888654 346776552 356755 77544
No 233
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.59 E-value=1e-13 Score=105.60 Aligned_cols=166 Identities=19% Similarity=0.347 Sum_probs=124.9
Q ss_pred eEEEEECCCCC-EEEEecCC--CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 12 EFALAMCPTEP-YVLSGGKD--KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 12 V~~~~~~~~~~-~l~t~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
+..+.-++..+ .+++|+.. ..++|||++.......... ...-..--
T Consensus 151 ~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKN-------------------------------vpnD~L~L 199 (412)
T KOG3881|consen 151 LYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKN-------------------------------VPNDRLGL 199 (412)
T ss_pred eeeeccCCCCCceEecCchhcccceeeeecccceeeeeccC-------------------------------CCCccccc
Confidence 45566666444 45678888 8899999986522221111 00000000
Q ss_pred cccCCeEEEEEecC-CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 89 GHEDTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 89 ~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
.-.-.++++.|-+. ....|++++.-+.+++||.+.++.| +..+.-...+++++...| .++++++|..-|.+..||++
T Consensus 200 rVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP-V~~fd~~E~~is~~~l~p-~gn~Iy~gn~~g~l~~FD~r 277 (412)
T KOG3881|consen 200 RVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP-VAQFDFLENPISSTGLTP-SGNFIYTGNTKGQLAKFDLR 277 (412)
T ss_pred eeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc-eeEeccccCcceeeeecC-CCcEEEEecccchhheeccc
Confidence 01224677888775 1378999999999999999988764 455556678999999999 99999999999999999999
Q ss_pred CCCCCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 168 NLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 168 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
. ++.+.. +++..+.|++|..+|.++ ++|+++-|..++|+|+.+
T Consensus 278 ~------~kl~g~~~kg~tGsirsih~hp~~~-~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 278 G------GKLLGCGLKGITGSIRSIHCHPTHP-VLASCGLDRYVRIHDIKT 321 (412)
T ss_pred C------ceeeccccCCccCCcceEEEcCCCc-eEEeeccceeEEEeeccc
Confidence 9 666655 888899999999999999 578999999999999998
No 234
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=7.8e-13 Score=109.34 Aligned_cols=169 Identities=14% Similarity=0.174 Sum_probs=107.6
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcC-C--CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE-EEcCCCc
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGD-D--SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL-TGSADNS 160 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~ 160 (309)
..+..+...+.+.+|+|+| +.|+..+. + ..|.+||+.+++. ..+......+.+.+|+| +++.|+ +.+.+|.
T Consensus 189 ~~l~~~~~~v~~p~wSPDG-~~la~~s~~~~~~~I~~~dl~~g~~---~~l~~~~g~~~~~~~SP-DG~~la~~~~~~g~ 263 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDG-TKLAYVSFESKKPVVYVHDLATGRR---RVVANFKGSNSAPAWSP-DGRTLAVALSRDGN 263 (427)
T ss_pred eEeccCCCCcccceEcCCC-CEEEEEEccCCCcEEEEEECCCCCE---EEeecCCCCccceEECC-CCCEEEEEEccCCC
Confidence 3344567789999999999 55555443 2 4699999988772 22333345567899999 887776 5677887
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
..+|.+... +.....+..+........|+|||++++.+...+|...||.+...+... ..+ .+.
T Consensus 264 ~~Iy~~d~~-----~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-----------~~l-t~~ 326 (427)
T PRK02889 264 SQIYTVNAD-----GSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-----------QRV-TFT 326 (427)
T ss_pred ceEEEEECC-----CCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-----------EEE-ecC
Confidence 777665431 233455554555566789999999876565556777777765322110 111 111
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
........|+|++.+++.+...+ .+..|.+||+..
T Consensus 327 --g~~~~~~~~SpDG~~Ia~~s~~~-----g~~~I~v~d~~~ 361 (427)
T PRK02889 327 --GSYNTSPRISPDGKLLAYISRVG-----GAFKLYVQDLAT 361 (427)
T ss_pred --CCCcCceEECCCCCEEEEEEccC-----CcEEEEEEECCC
Confidence 22344678999999877544321 124799999873
No 235
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.56 E-value=1.7e-13 Score=118.42 Aligned_cols=202 Identities=13% Similarity=0.135 Sum_probs=133.7
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-----eEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-----VIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
.+..+..+..|...+..++.++....+|++|+.||+|++||.+.-... ...+.......+.++.+.+ +++.+|+
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~-~~~~~Av 1115 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG-NGDQFAV 1115 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc-CCCeEEE
Confidence 345567788899999999998876689999999999999998753321 2233334567899999999 9999999
Q ss_pred EcCCCcEEEEecCCCCCCCC-CCceeeeccC-CCCee-EEEEecC-CCcEEEEecCCCcEEEEeCCcccccccCCCCCcC
Q 021657 155 GSADNSVRMFDRRNLTSNGV-GSPINKFEGH-SAAVL-CVQWSPD-KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~-~~~v~-~~~~~~~-~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 230 (309)
++.||.|++.++........ ....+....+ .+.+. .-++... +..+++.+...+.|..||++.....
T Consensus 1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~--------- 1186 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDA--------- 1186 (1431)
T ss_pred EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhH---------
Confidence 99999999999876211000 1111111111 22333 3334332 2336778888999999999983221
Q ss_pred CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh-cccceEEEeeeCC
Q 021657 231 YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE-KFKAHVISCTSKP 309 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~P 309 (309)
.........+.|++++.+|.+.+++ .|..-|.+.+||++- ..++.... ++..+|..+..+|
T Consensus 1187 ----w~lk~~~~hG~vTSi~idp~~~Wlv--------iGts~G~l~lWDLRF------~~~i~sw~~P~~~~i~~v~~~~ 1248 (1431)
T KOG1240|consen 1187 ----WRLKNQLRHGLVTSIVIDPWCNWLV--------IGTSRGQLVLWDLRF------RVPILSWEHPARAPIRHVWLCP 1248 (1431)
T ss_pred ----HhhhcCccccceeEEEecCCceEEE--------EecCCceEEEEEeec------CceeecccCcccCCcceEEeec
Confidence 1112233457899999999888776 566669999999993 33443332 2335555555443
No 236
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.56 E-value=5.2e-13 Score=98.17 Aligned_cols=160 Identities=16% Similarity=0.152 Sum_probs=120.7
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNG 173 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 173 (309)
..++.|++.+ ..++++..+|.+.+-+.........+..+.|..++....|+..+.+++.+|+.|+.+..||+|.+
T Consensus 124 ~lslD~~~~~-~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p---- 198 (339)
T KOG0280|consen 124 ALSLDISTSG-TKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIP---- 198 (339)
T ss_pred eeEEEeeccC-ceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCC----
Confidence 4577888887 66888889999986665445433445788999999999999878899999999999999999964
Q ss_pred CCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEc
Q 021657 174 VGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252 (309)
Q Consensus 174 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 252 (309)
.+.+.. .+.|...|.+|.-+|..++.+++|+.|-.|++||.|+.++++.. ..-.+.|+.+.++
T Consensus 199 -~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~---------------~~v~GGVWRi~~~ 262 (339)
T KOG0280|consen 199 -KTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFK---------------AKVGGGVWRIKHH 262 (339)
T ss_pred -cceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcccc---------------CccccceEEEEec
Confidence 444443 56788899999999887777899999999999999987776432 1123679999999
Q ss_pred cCCCe-EEEEecCCCCCCCCCCeEEEEEccc
Q 021657 253 ASDPW-TVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 253 ~~~~~-~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|.... ++++| .-+-.+|-+.++
T Consensus 263 p~~~~~lL~~C--------Mh~G~ki~~~~~ 285 (339)
T KOG0280|consen 263 PEIFHRLLAAC--------MHNGAKILDSSD 285 (339)
T ss_pred chhhhHHHHHH--------HhcCceEEEecc
Confidence 86542 33222 224566666664
No 237
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=3.1e-12 Score=106.33 Aligned_cols=164 Identities=15% Similarity=0.201 Sum_probs=108.7
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEc---CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE-EEcCCCc
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVG---DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL-TGSADNS 160 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~ 160 (309)
..+..|...+.+..|+|+| +.|+..+ .+..|.+||+.+++. ..+..+...+...+|+| +++.|+ +.+.++.
T Consensus 195 ~~lt~~~~~v~~p~wSpDG-~~lay~s~~~g~~~i~~~dl~~g~~---~~l~~~~g~~~~~~~SP-DG~~la~~~~~~g~ 269 (435)
T PRK05137 195 RYLTDGSSLVLTPRFSPNR-QEITYMSYANGRPRVYLLDLETGQR---ELVGNFPGMTFAPRFSP-DGRKVVMSLSQGGN 269 (435)
T ss_pred EEEecCCCCeEeeEECCCC-CEEEEEEecCCCCEEEEEECCCCcE---EEeecCCCcccCcEECC-CCCEEEEEEecCCC
Confidence 3455677889999999999 4555443 346899999988772 33445566778899999 887665 5555655
Q ss_pred --EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 161 --VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 161 --i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|++||+.+ +. +..+..+.......+|+|||++++.+...+| .|+++|+.. ++ .
T Consensus 270 ~~Iy~~d~~~------~~-~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g-~~---------------~ 326 (435)
T PRK05137 270 TDIYTMDLRS------GT-TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG-SN---------------P 326 (435)
T ss_pred ceEEEEECCC------Cc-eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCC-CC---------------e
Confidence 77778876 43 3455555556678899999998665554444 566777654 11 1
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+..+...+....|+|++.+++.+.... .+..|.+||+.
T Consensus 327 ~~lt~~~~~~~~~~~SpdG~~ia~~~~~~-----~~~~i~~~d~~ 366 (435)
T PRK05137 327 RRISFGGGRYSTPVWSPRGDLIAFTKQGG-----GQFSIGVMKPD 366 (435)
T ss_pred EEeecCCCcccCeEECCCCCEEEEEEcCC-----CceEEEEEECC
Confidence 11222234566788999999877654321 23478888875
No 238
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.55 E-value=2.2e-13 Score=101.80 Aligned_cols=232 Identities=16% Similarity=0.269 Sum_probs=138.7
Q ss_pred ceEEEEECCCCCE-EEEecCCCcEEEEeCCccccccccCCcccc---ccCCCCceeecCC-CCCCCCcccCCCCCcCccc
Q 021657 11 AEFALAMCPTEPY-VLSGGKDKSVVLWSIQDHITSSATDPATAK---SAGSSGSIIKQSP-KPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 11 ~V~~~~~~~~~~~-l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 85 (309)
.+.+++|||||+. |.+...|-+|.||.+.+.....-..++... ....++....+.. ......+.+........+.
T Consensus 93 gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~ 172 (447)
T KOG4497|consen 93 GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLK 172 (447)
T ss_pred cceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHH
Confidence 5789999999965 557778999999999876433332222211 1222222221111 1112222222233334445
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
.+.-.+...+.+.|+|+| +.| .+||---.. .+. .....-.+..++|+| .+++|++|+.|+.+|+.+
T Consensus 173 ~f~~dT~DltgieWsPdg-~~l---------aVwd~~Ley--kv~-aYe~~lG~k~v~wsP-~~qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 173 EFKLDTIDLTGIEWSPDG-NWL---------AVWDNVLEY--KVY-AYERGLGLKFVEWSP-CNQFLAVGSYDQMLRVLN 238 (447)
T ss_pred hcCCCcccccCceECCCC-cEE---------EEecchhhh--eee-eeeeccceeEEEecc-ccceEEeeccchhhhhhc
Confidence 555566778999999998 544 457643222 111 122235788999999 999999999999998865
Q ss_pred cCC---------------CC---------------------------------C------------CCCCCceeeeccCC
Q 021657 166 RRN---------------LT---------------------------------S------------NGVGSPINKFEGHS 185 (309)
Q Consensus 166 ~~~---------------~~---------------------------------~------------~~~~~~~~~~~~~~ 185 (309)
--+ +. . ....++...+...+
T Consensus 239 h~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk 318 (447)
T KOG4497|consen 239 HFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPK 318 (447)
T ss_pred eeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcc
Confidence 322 00 0 00011111111223
Q ss_pred CCeeEEEEecCCCcEEEEecCC--CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEec
Q 021657 186 AAVLCVQWSPDKSSVFGSSAED--GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 186 ~~v~~~~~~~~~~~l~~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 263 (309)
..+--++|++|..+ +|+-.+. +.+.+||+++. .+...-....+|....|+|..+.|++..+
T Consensus 319 ~g~g~lafs~Ds~y-~aTrnd~~PnalW~Wdlq~l----------------~l~avLiQk~piraf~WdP~~prL~vctg 381 (447)
T KOG4497|consen 319 CGAGKLAFSCDSTY-AATRNDKYPNALWLWDLQNL----------------KLHAVLIQKHPIRAFEWDPGRPRLVVCTG 381 (447)
T ss_pred cccceeeecCCceE-EeeecCCCCceEEEEechhh----------------hhhhhhhhccceeEEEeCCCCceEEEEcC
Confidence 45667999999986 4454422 56999999971 12233345678999999999888775433
Q ss_pred CCCCCCCCCCeEEEEEcc
Q 021657 264 DDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 264 ~d~~s~~~dg~v~vw~~~ 281 (309)
. ..+++|...
T Consensus 382 ~--------srLY~W~ps 391 (447)
T KOG4497|consen 382 K--------SRLYFWAPS 391 (447)
T ss_pred C--------ceEEEEcCC
Confidence 2 579999987
No 239
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.54 E-value=3.5e-13 Score=101.22 Aligned_cols=233 Identities=15% Similarity=0.206 Sum_probs=143.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.++.|+-.|.+|+||..+|.|.++.-...... .... ... ..........+..+. -
T Consensus 27 iis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~-ey~~--------------~t~-------fqshepEFDYLkSle-i 83 (433)
T KOG1354|consen 27 IISAVEFDHYGERLATGDKGGRVVLFEREKLYKG-EYNF--------------QTE-------FQSHEPEFDYLKSLE-I 83 (433)
T ss_pred ceeeEEeecccceEeecCCCCeEEEeeccccccc-ceee--------------eee-------eeccCcccchhhhhh-h
Confidence 6899999999999999999999999975532110 0000 000 000000111122222 2
Q ss_pred cCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCcce----------------------------------EEEeecc
Q 021657 91 EDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTSPV----------------------------------IKVEKAH 135 (309)
Q Consensus 91 ~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~----------------------------------~~~~~~~ 135 (309)
...|+.+.|.+++ ...|+..+.|.+|++|-++...... ...-.+|
T Consensus 84 eEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaH 163 (433)
T KOG1354|consen 84 EEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAH 163 (433)
T ss_pred hhhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccc
Confidence 4568889998764 3457777899999999876432110 1112367
Q ss_pred CCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC-----CCCeeEEEEecCCCcEEEEecCCCcE
Q 021657 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH-----SAAVLCVQWSPDKSSVFGSSAEDGLL 210 (309)
Q Consensus 136 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~dg~i 210 (309)
.-.|.++.++. +...++++ .|=.|.+|.+.-..+ .-.+..++.+ ..-|++..|+|..-.+|+-.+..|+|
T Consensus 164 tyhiNSIS~Ns-D~Et~lSA-DdLRINLWnlei~d~---sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtI 238 (433)
T KOG1354|consen 164 TYHINSISVNS-DKETFLSA-DDLRINLWNLEIIDQ---SFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTI 238 (433)
T ss_pred eeEeeeeeecC-ccceEeec-cceeeeeccccccCC---ceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcE
Confidence 77899999998 78888776 577899999876321 1222233322 23588999999887788888889999
Q ss_pred EEEeCCcccccccC---CCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 211 NIWDYEKVGKKVEQ---GPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 211 ~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++-|++...-.... .+.+.. +....-+.+--..|.++.|+++|.+++ +-.. -+|++||++.
T Consensus 239 rLcDmR~~aLCd~hsKlfEeped--p~~rsffseiIsSISDvKFs~sGryil-sRDy--------ltvk~wD~nm 302 (433)
T KOG1354|consen 239 RLCDMRQSALCDAHSKLFEEPED--PSSRSFFSEIISSISDVKFSHSGRYIL-SRDY--------LTVKLWDLNM 302 (433)
T ss_pred EEeechhhhhhcchhhhhccccC--CcchhhHHHHhhhhhceEEccCCcEEE-Eecc--------ceeEEEeccc
Confidence 99999952211110 000000 000111122235789999999888755 3333 5999999963
No 240
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.52 E-value=1.8e-11 Score=98.45 Aligned_cols=236 Identities=9% Similarity=0.077 Sum_probs=132.6
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
..+.|+|||+++.+++.||.|.++|+.+. +.+..+.. ..
T Consensus 40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~----------------------------------------~~v~~i~~-G~ 78 (369)
T PF02239_consen 40 AGLKFSPDGRYLYVANRDGTVSVIDLATG----------------------------------------KVVATIKV-GG 78 (369)
T ss_dssp EEEE-TT-SSEEEEEETTSEEEEEETTSS----------------------------------------SEEEEEE--SS
T ss_pred eEEEecCCCCEEEEEcCCCeEEEEECCcc----------------------------------------cEEEEEec-CC
Confidence 45789999999999999999999999853 33344433 23
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-------cCCceeEEEeccCCCCeE-EEEcCCCcEEEE
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-------HDADLHCVDWNPLDDNLI-LTGSADNSVRMF 164 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l-~~~~~dg~i~i~ 164 (309)
...+++++++|+.++++...++.+.++|.++.+ .+..+.. ....+.++..+| ....+ ++--..+.|.+.
T Consensus 79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle--~v~~I~~~~~~~~~~~~Rv~aIv~s~-~~~~fVv~lkd~~~I~vV 155 (369)
T PF02239_consen 79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLE--PVKTIPTGGMPVDGPESRVAAIVASP-GRPEFVVNLKDTGEIWVV 155 (369)
T ss_dssp EEEEEEE--TTTEEEEEEEETTEEEEEETTT----EEEEEE--EE-TTTS---EEEEEE-S-SSSEEEEEETTTTEEEEE
T ss_pred CcceEEEcCCCCEEEEEecCCCceeEecccccc--ceeecccccccccccCCCceeEEecC-CCCEEEEEEccCCeEEEE
Confidence 457899999995555566689999999998877 4544432 234567787788 56644 444555889888
Q ss_pred ecCCCCCCCCCCce-eeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC----CC---------Cc-
Q 021657 165 DRRNLTSNGVGSPI-NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG----PR---------TT- 229 (309)
Q Consensus 165 d~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~----~~---------~~- 229 (309)
|... .+.+ .+............|+|++++++++...++.|-++|.++.+...... +. ..
T Consensus 156 dy~d------~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~ 229 (369)
T PF02239_consen 156 DYSD------PKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGF 229 (369)
T ss_dssp ETTT------SSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTT
T ss_pred Eecc------ccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCc
Confidence 9877 3322 22322455678899999999988777777888888887632221100 00 00
Q ss_pred --------------------------CCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 230 --------------------------NYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 230 --------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
....+.+..+.....+ .-+..+|+++++.+... .+...+.|.++|.++
T Consensus 230 g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~----~~~~~~~v~viD~~t- 303 (369)
T PF02239_consen 230 GPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTF----LNPDADTVQVIDKKT- 303 (369)
T ss_dssp EEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-T----T-SSHT-EEEEECCG-
T ss_pred ceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeecc----CCCCCceEEEEECcC-
Confidence 0011122233333334 66778999998887621 122348999999994
Q ss_pred ccCChhhHhHhhhccc-ceEEEeeeCC
Q 021657 284 IYRPQDEVLAELEKFK-AHVISCTSKP 309 (309)
Q Consensus 284 ~~~~~~~~~~~~~~h~-~~v~~~~~~P 309 (309)
.+.+.++.... ..+..+.|+|
T Consensus 304 -----l~~~~~i~~~~~~~~~h~ef~~ 325 (369)
T PF02239_consen 304 -----LKVVKTITPGPGKRVVHMEFNP 325 (369)
T ss_dssp -----TEEEE-HHHHHT--EEEEEE-T
T ss_pred -----cceeEEEeccCCCcEeccEECC
Confidence 44444443222 2355555543
No 241
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.52 E-value=8.8e-13 Score=112.17 Aligned_cols=147 Identities=18% Similarity=0.224 Sum_probs=117.8
Q ss_pred EecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCce
Q 021657 99 FCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178 (309)
Q Consensus 99 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 178 (309)
++++. -++++|+--+.|.+|+....+. ...+.+|.+.|.++.|+- ++.++++.+.|..+|+|++.+ .+..
T Consensus 141 ~s~~~-~~i~~gsv~~~iivW~~~~dn~--p~~l~GHeG~iF~i~~s~-dg~~i~s~SdDRsiRlW~i~s------~~~~ 210 (967)
T KOG0974|consen 141 DSAEE-LYIASGSVFGEIIVWKPHEDNK--PIRLKGHEGSIFSIVTSL-DGRYIASVSDDRSIRLWPIDS------REVL 210 (967)
T ss_pred ccCcE-EEEEeccccccEEEEeccccCC--cceecccCCceEEEEEcc-CCcEEEEEecCcceeeeeccc------cccc
Confidence 34444 7899999999999999985553 236789999999999999 999999999999999999998 4433
Q ss_pred e-eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC-cceeeEEEccCCC
Q 021657 179 N-KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR-DKVVDFHWNASDP 256 (309)
Q Consensus 179 ~-~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 256 (309)
. ..-+|...+..+.|.|+ . +++++.|.+.++|+... ..+..+.+|. ..+..++..+...
T Consensus 211 ~~~~fgHsaRvw~~~~~~n--~-i~t~gedctcrvW~~~~----------------~~l~~y~~h~g~~iw~~~~~~~~~ 271 (967)
T KOG0974|consen 211 GCTGFGHSARVWACCFLPN--R-IITVGEDCTCRVWGVNG----------------TQLEVYDEHSGKGIWKIAVPIGVI 271 (967)
T ss_pred CcccccccceeEEEEeccc--e-eEEeccceEEEEEeccc----------------ceehhhhhhhhcceeEEEEcCCce
Confidence 3 66679999999999999 3 56999999999997654 1223556665 4688999988665
Q ss_pred eEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 257 WTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 257 ~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+ |++.|+.+++|++..
T Consensus 272 ~~v--------T~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 272 IKV--------TGGNDSTLKLWDLNG 289 (967)
T ss_pred EEE--------eeccCcchhhhhhhc
Confidence 544 666679999999874
No 242
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=3.2e-12 Score=106.06 Aligned_cols=163 Identities=13% Similarity=0.162 Sum_probs=105.0
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcC---CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE-EEcCCC--
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGD---DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL-TGSADN-- 159 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg-- 159 (309)
.+..+...+.+..|+|+| +.|+..+. +..|.+||+.+++. ..+........+..|+| +++.++ +.+.+|
T Consensus 198 ~lt~~~~~v~~p~wSpDg-~~la~~s~~~~~~~l~~~dl~~g~~---~~l~~~~g~~~~~~~Sp-DG~~l~~~~s~~g~~ 272 (433)
T PRK04922 198 TILRSAEPILSPAWSPDG-KKLAYVSFERGRSAIYVQDLATGQR---ELVASFRGINGAPSFSP-DGRRLALTLSRDGNP 272 (433)
T ss_pred EeecCCCccccccCCCCC-CEEEEEecCCCCcEEEEEECCCCCE---EEeccCCCCccCceECC-CCCEEEEEEeCCCCc
Confidence 344566788999999999 55665543 34699999987763 22333344556889999 887665 445555
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc--EEEEeCCcccccccCCCCCcCCCCceee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL--LNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
.|++||+.+ ++ +..+..+.......+|+|||++++.+...+|. |+++|+.. ++. .
T Consensus 273 ~Iy~~d~~~------g~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~-g~~---------------~ 329 (433)
T PRK04922 273 EIYVMDLGS------RQ-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG-GSA---------------E 329 (433)
T ss_pred eEEEEECCC------CC-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC-CCe---------------E
Confidence 599999986 44 34455455555678999999987656555665 44455543 111 1
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+..+.......+|+|++.+++++...+ .+..|.+||+.
T Consensus 330 ~lt~~g~~~~~~~~SpDG~~Ia~~~~~~-----~~~~I~v~d~~ 368 (433)
T PRK04922 330 RLTFQGNYNARASVSPDGKKIAMVHGSG-----GQYRIAVMDLS 368 (433)
T ss_pred EeecCCCCccCEEECCCCCEEEEEECCC-----CceeEEEEECC
Confidence 1111223345789999999877654322 22479999987
No 243
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.50 E-value=2e-13 Score=122.00 Aligned_cols=187 Identities=20% Similarity=0.344 Sum_probs=139.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.++.=+|...+.+||+.||.|++|....+.....+ ...+
T Consensus 2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~--------------------------------------rt~g- 2250 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCF--------------------------------------RTAG- 2250 (2439)
T ss_pred ceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEe--------------------------------------eccC-
Confidence 5788888999999999999999999998743221111 0112
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc---CCCcEEEEecC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS---ADNSVRMFDRR 167 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~ 167 (309)
+..|+.+.|+.+| +.+..+..||.+.+|... .+ .....+.|....+.+.|-. ..+++++ .++.+.+||..
T Consensus 2251 ~s~vtr~~f~~qG-nk~~i~d~dg~l~l~q~~-pk--~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl 2323 (2439)
T KOG1064|consen 2251 NSRVTRSRFNHQG-NKFGIVDGDGDLSLWQAS-PK--PYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTL 2323 (2439)
T ss_pred cchhhhhhhcccC-CceeeeccCCceeecccC-Cc--ceeccccCCccccceeeee---hhhhccccCCCCCcccchhcc
Confidence 3778999999999 778899999999999986 33 5677788998888888853 5566654 46899999976
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
.+.. ...+. ..|.+.++++++.|... +|.+|+.+|.|++||++. .++...++.
T Consensus 2324 ~~~~---~s~v~--~~H~~gaT~l~~~P~~q-llisggr~G~v~l~D~rq---------------rql~h~~~~------ 2376 (2439)
T KOG1064|consen 2324 LPPM---NSLVH--TCHDGGATVLAYAPKHQ-LLISGGRKGEVCLFDIRQ---------------RQLRHTFQA------ 2376 (2439)
T ss_pred cCcc---cceee--eecCCCceEEEEcCcce-EEEecCCcCcEEEeehHH---------------HHHHHHhhh------
Confidence 5321 23344 77999999999999988 567999999999999997 222222221
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++ ...+++ +|+..|.++||++..
T Consensus 2377 ---~~-~~~~f~--------~~ss~g~ikIw~~s~ 2399 (2439)
T KOG1064|consen 2377 ---LD-TREYFV--------TGSSEGNIKIWRLSE 2399 (2439)
T ss_pred ---hh-hhheee--------ccCcccceEEEEccc
Confidence 33 344444 666679999999993
No 244
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.49 E-value=3.1e-13 Score=105.90 Aligned_cols=202 Identities=17% Similarity=0.221 Sum_probs=150.7
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC-CeEEEEcCCCcE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSV 161 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i 161 (309)
....|..|.+.|+.+.|+..| ..|++|+.|..|.+||...+.. ......+|...|..-.|-|+.+ ..+++++.||.+
T Consensus 134 l~~kL~~H~GcVntV~FN~~G-d~l~SgSDD~~vv~WdW~~~~~-~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv 211 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRG-DVLASGSDDLQVVVWDWVSGSP-KLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQV 211 (559)
T ss_pred hhhcccCCCCccceeeecccC-ceeeccCccceEEeehhhccCc-ccccccccccchhhhhccCCCCCcCceeccccCce
Confidence 345677899999999999998 8999999999999999987773 3445568888888888988544 578889999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++=.+..... .+....+..|.++|..++.-|+..+-|.+++.|+.+.-+|++.... ...+.....
T Consensus 212 r~s~i~~t~~---~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~p------------a~~~~cr~~ 276 (559)
T KOG1334|consen 212 RVSEILETGY---VENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVP------------AEKFVCREA 276 (559)
T ss_pred eeeeeccccc---eecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCc------------cceeeeecc
Confidence 9877655211 2224456678999999999999999889999999999999987222 222223333
Q ss_pred CCc---ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc------cceEEEeeeC
Q 021657 242 HRD---KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF------KAHVISCTSK 308 (309)
Q Consensus 242 ~~~---~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~ 308 (309)
+.. ...+++.+|-..+.++ +||.|..+++||.+..........+..+-.| .-.|++++++
T Consensus 277 ~~~~~v~L~~Ia~~P~nt~~fa-------VgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ys 345 (559)
T KOG1334|consen 277 DEKERVGLYTIAVDPRNTNEFA-------VGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYS 345 (559)
T ss_pred CCccceeeeeEecCCCCccccc-------cCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEec
Confidence 333 5789999999988887 5555699999999876544444444544333 2356777664
No 245
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=1.9e-11 Score=101.07 Aligned_cols=165 Identities=12% Similarity=0.173 Sum_probs=105.1
Q ss_pred cccccCCeEEEEEecCCCcEEEEEc---CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE-cCCC--c
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVG---DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG-SADN--S 160 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg--~ 160 (309)
+..+...+...+|+|+| +.|+..+ .+..|.+||+.+++...+ ......+..++|+| +++.|+.. ..+| .
T Consensus 194 lt~~~~~~~~p~wSPDG-~~la~~s~~~g~~~i~i~dl~~G~~~~l---~~~~~~~~~~~~SP-DG~~La~~~~~~g~~~ 268 (429)
T PRK03629 194 VHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVRQV---ASFPRHNGAPAFSP-DGSKLAFALSKTGSLN 268 (429)
T ss_pred eecCCCceeeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCCeEEc---cCCCCCcCCeEECC-CCCEEEEEEcCCCCcE
Confidence 34456789999999999 4455432 345799999987763222 22334456789999 88877754 4455 5
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|++||+.+ ++. ..+..+...+....|+|||+.++.+...++...||.++..+.. ...+.
T Consensus 269 I~~~d~~t------g~~-~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~--------------~~~lt 327 (429)
T PRK03629 269 LYVMDLAS------GQI-RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA--------------PQRIT 327 (429)
T ss_pred EEEEECCC------CCE-EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC--------------eEEee
Confidence 88899986 443 3444444567889999999987655555566666654331111 11122
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+........|+|++.+++.+...+ ....|.+||+..
T Consensus 328 ~~~~~~~~~~~SpDG~~Ia~~~~~~-----g~~~I~~~dl~~ 364 (429)
T PRK03629 328 WEGSQNQDADVSSDGKFMVMVSSNG-----GQQHIAKQDLAT 364 (429)
T ss_pred cCCCCccCEEECCCCCEEEEEEccC-----CCceEEEEECCC
Confidence 2333456789999999877655432 234688899873
No 246
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.47 E-value=5.3e-13 Score=109.89 Aligned_cols=257 Identities=20% Similarity=0.316 Sum_probs=174.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC------ccccccCCCCceeecCCCCCCCCcccCCCC---Cc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP------ATAKSAGSSGSIIKQSPKPGDGNDKAADGP---SV 81 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 81 (309)
.+..+.++|.|+-++.++.-|.+ +-|+........... ..............+..........+|... ..
T Consensus 26 ~~~a~si~p~grdi~lAsr~gl~-i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~ 104 (1081)
T KOG0309|consen 26 GFNAVSINPSGRDIVLASRQGLY-IIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSN 104 (1081)
T ss_pred cccceeeccccchhhhhhhcCeE-EEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCCcc
Confidence 46788999999999999987765 457765422111111 000111111111122222233333444432 22
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.....+.+|...|+++.|+|+.+..+++++-|..+..||+++...+ +............++|+..+++.+|+ +....|
T Consensus 105 aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p-~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i 182 (1081)
T KOG0309|consen 105 AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRP-FYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDI 182 (1081)
T ss_pred ceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcc-eeeeecccccCceeeecccCcchhhh-ccCCce
Confidence 3334567899999999999999899999999999999999988754 44555556677899999866666665 456789
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC-c-----------
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT-T----------- 229 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~-~----------- 229 (309)
++||.+.. ..++..+++|-..|+.++|..--...+.+++.|++|+.||..+..+........ .
T Consensus 183 ~vwd~r~g-----s~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg 257 (1081)
T KOG0309|consen 183 FVWDLRKG-----STPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFG 257 (1081)
T ss_pred EEEeccCC-----CcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccC
Confidence 99999985 678999999999999999987544456699999999999987633221110000 0
Q ss_pred ----------------------------CCCCceeeeecCCCcceeeEEEccC---------CCeEEEEecCCCCCCCCC
Q 021657 230 ----------------------------NYPAGLFFQHAGHRDKVVDFHWNAS---------DPWTVVSVSDDCDSTGGG 272 (309)
Q Consensus 230 ----------------------------~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~~s~s~d~~s~~~d 272 (309)
....+++..+.||.+.|....|-.. ..+-+++-|.|
T Consensus 258 ~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD------- 330 (1081)
T KOG0309|consen 258 EGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKD------- 330 (1081)
T ss_pred ceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecC-------
Confidence 0123467888999999888877532 24677777777
Q ss_pred CeEEEEEccc
Q 021657 273 GTLQIWRMSD 282 (309)
Q Consensus 273 g~v~vw~~~~ 282 (309)
..+++|.+.+
T Consensus 331 ~~lrlWpI~~ 340 (1081)
T KOG0309|consen 331 QTLRLWPIDS 340 (1081)
T ss_pred CceEeeeccH
Confidence 8999999975
No 247
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.45 E-value=7e-12 Score=100.62 Aligned_cols=165 Identities=14% Similarity=0.185 Sum_probs=130.0
Q ss_pred CCcEEEEEcCCCeEEEEEcCCCCcceEEEeec--c-CCceeEEEe------cc-------------CCCCeEEEEcCCCc
Q 021657 103 SAQEFCSVGDDSCLILWDARVGTSPVIKVEKA--H-DADLHCVDW------NP-------------LDDNLILTGSADNS 160 (309)
Q Consensus 103 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~-~~~v~~~~~------~~-------------~~~~~l~~~~~dg~ 160 (309)
+..+||....||.+++||...++. ...+.. + .+..++..| +| .+...++-|...|.
T Consensus 4 ~~~~~A~~~~~g~l~iw~t~~~~~--~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 4 ALDYFALSTGDGRLRIWDTAKNQL--QQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred hhheEeecCCCCeEEEEEccCcee--eeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 337899999999999999988773 332221 1 233344444 22 13457888999999
Q ss_pred EEEEecCCCCCCCCCCceeeec--cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 161 VRMFDRRNLTSNGVGSPINKFE--GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
|.+|+... ++.-..+. .|.+.|+++.++.+-.++ .+++.|+.+..|+... ...+..
T Consensus 82 v~~ys~~~------g~it~~~st~~h~~~v~~~~~~~~~~ci-yS~~ad~~v~~~~~~~---------------~~~~~~ 139 (541)
T KOG4547|consen 82 VLLYSVAG------GEITAKLSTDKHYGNVNEILDAQRLGCI-YSVGADLKVVYILEKE---------------KVIIRI 139 (541)
T ss_pred EEEEEecC------CeEEEEEecCCCCCcceeeecccccCce-EecCCceeEEEEeccc---------------ceeeee
Confidence 99999998 77777664 688999999999988864 5999999999999987 456667
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
..+....+.++..+||+. +++++| +.|++||++ +.+.+.+|++|.++|.+++|
T Consensus 140 ~~~~~~~~~sl~is~D~~-~l~~as---------~~ik~~~~~------~kevv~~ftgh~s~v~t~~f 192 (541)
T KOG4547|consen 140 WKEQKPLVSSLCISPDGK-ILLTAS---------RQIKVLDIE------TKEVVITFTGHGSPVRTLSF 192 (541)
T ss_pred eccCCCccceEEEcCCCC-EEEecc---------ceEEEEEcc------CceEEEEecCCCcceEEEEE
Confidence 778888899999999865 455555 689999999 89999999999999999987
No 248
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.45 E-value=6.2e-12 Score=103.55 Aligned_cols=254 Identities=15% Similarity=0.198 Sum_probs=167.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
...|++|+....++|.|+.||.++|-.+.+........+ +....+...-+.+.+|
T Consensus 16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~g-------------------------laa~snLsmNQtLeGH 70 (1189)
T KOG2041|consen 16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSG-------------------------LAAASNLSMNQTLEGH 70 (1189)
T ss_pred eEEEEEEcccCCeEEeccccceeEEEEccccCCcccccc-------------------------cccccccchhhhhccC
Confidence 578999999999999999999999999876422211111 1122334455788999
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
+..|.-+.|+.+. +.|-+...+|.|.+|-+-.+.+-....-...++-|.+|+|+. +|..+.....||.|.+=.+.
T Consensus 71 ~~sV~vvTWNe~~-QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~-dG~kIcIvYeDGavIVGsvd--- 145 (1189)
T KOG2041|consen 71 NASVMVVTWNENN-QKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNL-DGTKICIVYEDGAVIVGSVD--- 145 (1189)
T ss_pred cceEEEEEecccc-ccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcC-CCcEEEEEEccCCEEEEeec---
Confidence 9999999999887 779999999999999998877433333344567899999999 99999999999999887766
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccc-c------------cCCCCCc--------
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK-V------------EQGPRTT-------- 229 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~-~------------~~~~~~~-------- 229 (309)
+..+.--.-.......+.|++|.+.++ .+-.+|.+.+||....-.. + ...+...
T Consensus 146 ----GNRIwgKeLkg~~l~hv~ws~D~~~~L-f~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g 220 (1189)
T KOG2041|consen 146 ----GNRIWGKELKGQLLAHVLWSEDLEQAL-FKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTG 220 (1189)
T ss_pred ----cceecchhcchheccceeecccHHHHH-hhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccC
Confidence 333433222233455788999998654 6777899999987542110 0 0000000
Q ss_pred ----CCCCceeee----------ec----------CCCcceeeEEEccCCCeEEEEecCCCCCCC--CC-CeEEEEEccc
Q 021657 230 ----NYPAGLFFQ----------HA----------GHRDKVVDFHWNASDPWTVVSVSDDCDSTG--GG-GTLQIWRMSD 282 (309)
Q Consensus 230 ----~~~~~~~~~----------~~----------~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~--~d-g~v~vw~~~~ 282 (309)
..|..+... +. ...-.+....|+++|..| +.++.|. ... .| +.|.+|..-
T Consensus 221 ~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vL-AvcG~~~-da~~~~d~n~v~Fysp~- 297 (1189)
T KOG2041|consen 221 PYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVL-AVCGNDS-DADEPTDSNKVHFYSPY- 297 (1189)
T ss_pred ccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEE-EEccCcc-cccCccccceEEEeccc-
Confidence 000111000 00 111357889999988754 4555441 111 12 366666554
Q ss_pred cccCChhhHhHhhhcccceEEEeeeC
Q 021657 283 LIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 283 ~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
++.+.+++-....|+++.|-
T Consensus 298 ------G~i~gtlkvpg~~It~lsWE 317 (1189)
T KOG2041|consen 298 ------GHIVGTLKVPGSCITGLSWE 317 (1189)
T ss_pred ------hhheEEEecCCceeeeeEEc
Confidence 77788888777888888873
No 249
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.44 E-value=1.9e-12 Score=110.16 Aligned_cols=151 Identities=20% Similarity=0.350 Sum_probs=123.2
Q ss_pred EECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeE
Q 021657 16 AMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVE 95 (309)
Q Consensus 16 ~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 95 (309)
-++++.-++++|+.-+.|.+|+... ...+. .+.+|.+.|.
T Consensus 140 g~s~~~~~i~~gsv~~~iivW~~~~---------------------------------------dn~p~-~l~GHeG~iF 179 (967)
T KOG0974|consen 140 GDSAEELYIASGSVFGEIIVWKPHE---------------------------------------DNKPI-RLKGHEGSIF 179 (967)
T ss_pred eccCcEEEEEeccccccEEEEeccc---------------------------------------cCCcc-eecccCCceE
Confidence 3456667888888889999998751 11122 5789999999
Q ss_pred EEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCC
Q 021657 96 DVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175 (309)
Q Consensus 96 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 175 (309)
++.|+.+| .++++.++|.++++|++.+.+... ....+|...+..++|.| + .+++++.|-+.++|+.. +
T Consensus 180 ~i~~s~dg-~~i~s~SdDRsiRlW~i~s~~~~~-~~~fgHsaRvw~~~~~~-n--~i~t~gedctcrvW~~~-------~ 247 (967)
T KOG0974|consen 180 SIVTSLDG-RYIASVSDDRSIRLWPIDSREVLG-CTGFGHSARVWACCFLP-N--RIITVGEDCTCRVWGVN-------G 247 (967)
T ss_pred EEEEccCC-cEEEEEecCcceeeeecccccccC-cccccccceeEEEEecc-c--eeEEeccceEEEEEecc-------c
Confidence 99999999 899999999999999999988533 35568999999999998 5 99999999999999766 4
Q ss_pred CceeeeccCC-CCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 176 SPINKFEGHS-AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 176 ~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
..+..+..|. ..+..++..++.. +.++++.|+.+++||+...+
T Consensus 248 ~~l~~y~~h~g~~iw~~~~~~~~~-~~vT~g~Ds~lk~~~l~~r~ 291 (967)
T KOG0974|consen 248 TQLEVYDEHSGKGIWKIAVPIGVI-IKVTGGNDSTLKLWDLNGRG 291 (967)
T ss_pred ceehhhhhhhhcceeEEEEcCCce-EEEeeccCcchhhhhhhccc
Confidence 5566777775 4588888888777 46799999999999987643
No 250
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.43 E-value=5.3e-10 Score=90.04 Aligned_cols=222 Identities=13% Similarity=0.177 Sum_probs=136.7
Q ss_pred eEEEEECCCCCEEEEecC-CCcEEEEeCCcc-ccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 12 EFALAMCPTEPYVLSGGK-DKSVVLWSIQDH-ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~-dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
...++++|++++|+++.. +|.|.++++... .......... . ...-......
T Consensus 89 p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~---~------------------------~g~g~~~~rq 141 (345)
T PF10282_consen 89 PCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVR---H------------------------EGSGPNPDRQ 141 (345)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEE---S------------------------EEEESSTTTT
T ss_pred cEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecc---c------------------------CCCCCccccc
Confidence 357899999999988764 899999999853 1100000000 0 0000000011
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce--EEEe-eccCCceeEEEeccCCCCeEE-EEcCCCcEEEEe
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV--IKVE-KAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFD 165 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~-~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~i~d 165 (309)
......++.|+|+++.++++.-....|.+|++....... ...+ .......+.+.|+| +++++. +...++.|.+++
T Consensus 142 ~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~p-dg~~~Yv~~e~s~~v~v~~ 220 (345)
T PF10282_consen 142 EGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSP-DGKYAYVVNELSNTVSVFD 220 (345)
T ss_dssp SSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-T-TSSEEEEEETTTTEEEEEE
T ss_pred ccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcC-CcCEEEEecCCCCcEEEEe
Confidence 234567899999995555555556689999997665212 1222 23445678999999 777664 455688999999
Q ss_pred cCCCCCCCCCCceeeeccC------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 166 RRNLTSNGVGSPINKFEGH------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
+..... ..+.+..+... ......|+++|||++|+++...++.|.+|+++..... ...+...
T Consensus 221 ~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~-----------l~~~~~~ 287 (345)
T PF10282_consen 221 YDPSDG--SLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGT-----------LTLVQTV 287 (345)
T ss_dssp EETTTT--EEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTT-----------EEEEEEE
T ss_pred ecccCC--ceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCc-----------eEEEEEE
Confidence 983210 01222222211 1257889999999999988888999999999542211 1223333
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.........++++|++.+|+++.-.+ +.|.+|+++
T Consensus 288 ~~~G~~Pr~~~~s~~g~~l~Va~~~s-------~~v~vf~~d 322 (345)
T PF10282_consen 288 PTGGKFPRHFAFSPDGRYLYVANQDS-------NTVSVFDID 322 (345)
T ss_dssp EESSSSEEEEEE-TTSSEEEEEETTT-------TEEEEEEEE
T ss_pred eCCCCCccEEEEeCCCCEEEEEecCC-------CeEEEEEEe
Confidence 33344578999999999999866655 899999986
No 251
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.43 E-value=9.3e-12 Score=93.68 Aligned_cols=163 Identities=17% Similarity=0.194 Sum_probs=114.1
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCc--ccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGND--KAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 79 (309)
+....|.. .|..+-|+-..+++++.+.|..+.---.+.+............... ...+.....+...+.+ .-....
T Consensus 108 r~~~~h~~-~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~-~~d~~~~fvGd~~gqvt~lr~~~~ 185 (404)
T KOG1409|consen 108 KDYLAHQA-RVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASAL-QFDALYAFVGDHSGQITMLKLEQN 185 (404)
T ss_pred hhhhhhhc-ceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCC-ceeeEEEEecccccceEEEEEeec
Confidence 45667888 8999999999999999999988743333332211111111111100 0011122222223332 223344
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
...++..+.+|.+.+.+++|.+.. .+|.+|..|..+.+||+.-.+ .....+.+|...|..++..+ .-..+++++.||
T Consensus 186 ~~~~i~~~~~h~~~~~~l~Wd~~~-~~LfSg~~d~~vi~wdigg~~-g~~~el~gh~~kV~~l~~~~-~t~~l~S~~edg 262 (404)
T KOG1409|consen 186 GCQLITTFNGHTGEVTCLKWDPGQ-RLLFSGASDHSVIMWDIGGRK-GTAYELQGHNDKVQALSYAQ-HTRQLISCGEDG 262 (404)
T ss_pred CCceEEEEcCcccceEEEEEcCCC-cEEEeccccCceEEEeccCCc-ceeeeeccchhhhhhhhhhh-hheeeeeccCCC
Confidence 566778889999999999999977 889999999999999996554 35677789999999999988 788999999999
Q ss_pred cEEEEecCCC
Q 021657 160 SVRMFDRRNL 169 (309)
Q Consensus 160 ~i~i~d~~~~ 169 (309)
.|.+||+...
T Consensus 263 ~i~~w~mn~~ 272 (404)
T KOG1409|consen 263 GIVVWNMNVK 272 (404)
T ss_pred eEEEEeccce
Confidence 9999998753
No 252
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.42 E-value=6.1e-12 Score=93.61 Aligned_cols=242 Identities=14% Similarity=0.201 Sum_probs=145.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccc-cCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA-TDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
.|+++.|...|.||+||..-|.|.+|.-+....... +-. ...+.. .....+..+.
T Consensus 28 ~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~t---eFQshe--------------------~EFDYLkSle- 83 (460)
T COG5170 28 KITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFT---EFQSHE--------------------LEFDYLKSLE- 83 (460)
T ss_pred eeeEEEeccccceEeecCCCceEEEeecccccccchhhhh---hhcccc--------------------cchhhhhhcc-
Confidence 689999999999999999999999998654210000 000 000000 0011111111
Q ss_pred ccCCeEEEEEecC-CCcEEEEEcCCCeEEEEEcCCCCc-----------------------------------------c
Q 021657 90 HEDTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGTS-----------------------------------------P 127 (309)
Q Consensus 90 ~~~~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~-----------------------------------------~ 127 (309)
-...|..+.|..+ +...|+..+.|.+|++|.+..... +
T Consensus 84 ieEKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p 163 (460)
T COG5170 84 IEEKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKP 163 (460)
T ss_pred HHHHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEecc
Confidence 2346788888644 456677788999999998754310 0
Q ss_pred eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCC-----CCeeEEEEecCCCcEEE
Q 021657 128 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS-----AAVLCVQWSPDKSSVFG 202 (309)
Q Consensus 128 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~ 202 (309)
.......|...|.++.++. +...++++ .|=.|.+|++.-... .-.+..++.|. .-|++..|+|....++.
T Consensus 164 ~rvyaNaH~yhiNSiS~Ns-D~et~lSa-DdLrINLWnl~i~D~---sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fm 238 (460)
T COG5170 164 CRVYANAHPYHINSISFNS-DKETLLSA-DDLRINLWNLEIIDG---SFNIVDIKPHNMEELTEVITSAEFHPEMCNVFM 238 (460)
T ss_pred ceeccccceeEeeeeeecC-chheeeec-cceeeeeccccccCC---ceEEEeccCccHHHHHHHHhhcccCHhHcceEE
Confidence 1111246777888999987 66666665 677899999876421 22233334333 35889999998777777
Q ss_pred EecCCCcEEEEeCCcccccccCCCCCcCCC-CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 203 SSAEDGLLNIWDYEKVGKKVEQGPRTTNYP-AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 203 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
-.+..|.|++-|++................ +.-.--+.+-...|.++.|+++|+++ ++-+. -+|++||++
T Consensus 239 YSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryI-lsRdy--------ltvkiwDvn 309 (460)
T COG5170 239 YSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYI-LSRDY--------LTVKIWDVN 309 (460)
T ss_pred EecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEE-EEecc--------ceEEEEecc
Confidence 778899999999995221111000000000 00011122234578999999988764 44444 599999998
Q ss_pred ccccCChhhHhHhh
Q 021657 282 DLIYRPQDEVLAEL 295 (309)
Q Consensus 282 ~~~~~~~~~~~~~~ 295 (309)
. ...|++++
T Consensus 310 m-----~k~pikTi 318 (460)
T COG5170 310 M-----AKNPIKTI 318 (460)
T ss_pred c-----ccCCceee
Confidence 5 34455544
No 253
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.42 E-value=1.9e-11 Score=97.98 Aligned_cols=244 Identities=13% Similarity=0.172 Sum_probs=156.2
Q ss_pred CCCCc-ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC-cc-ccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 6 GHQDN-AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-AT-AKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 6 ~H~~~-~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.|.++ .|.-.-++.|-..++---.|++|.+-..-..-....... .. .........+ ..+..+..++..++..++
T Consensus 90 RhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~~RIP~~GRDm~y~~~scDl---y~~gsg~evYRlNLEqGr 166 (703)
T KOG2321|consen 90 RHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYRTRIPKFGRDMKYHKPSCDL---YLVGSGSEVYRLNLEQGR 166 (703)
T ss_pred ecccccceeEEEeccchhhheEeecCceeeehhhcCeeeeeecCcCCccccccCCCccE---EEeecCcceEEEEccccc
Confidence 34443 344444555655566666678887765433211111000 00 0000001111 112234456666778888
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe------eccCC-----ceeEEEeccCCCCe
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE------KAHDA-----DLHCVDWNPLDDNL 151 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~-----~v~~~~~~~~~~~~ 151 (309)
.+..+....+.++++..++-. .+|++|+.+|.|..||.+.... +..+ ..|.. .|+++.|+. +|-.
T Consensus 167 fL~P~~~~~~~lN~v~in~~h-gLla~Gt~~g~VEfwDpR~ksr--v~~l~~~~~v~s~pg~~~~~svTal~F~d-~gL~ 242 (703)
T KOG2321|consen 167 FLNPFETDSGELNVVSINEEH-GLLACGTEDGVVEFWDPRDKSR--VGTLDAASSVNSHPGGDAAPSVTALKFRD-DGLH 242 (703)
T ss_pred cccccccccccceeeeecCcc-ceEEecccCceEEEecchhhhh--heeeecccccCCCccccccCcceEEEecC-Ccee
Confidence 888888888999999999988 7899999999999999987652 2222 22333 499999998 8999
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeee-ccCCCCeeEEEEecCCC-cEEEEecCCCcEEEEeCCcccccccCCCCCc
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKF-EGHSAAVLCVQWSPDKS-SVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 229 (309)
+++|+.+|.+.|||+|+ .+++..- .+..-+|..+.|.+.+. ..+ .......++|||-.. ++.
T Consensus 243 ~aVGts~G~v~iyDLRa------~~pl~~kdh~~e~pi~~l~~~~~~~q~~v-~S~Dk~~~kiWd~~~-Gk~-------- 306 (703)
T KOG2321|consen 243 VAVGTSTGSVLIYDLRA------SKPLLVKDHGYELPIKKLDWQDTDQQNKV-VSMDKRILKIWDECT-GKP-------- 306 (703)
T ss_pred EEeeccCCcEEEEEccc------CCceeecccCCccceeeecccccCCCceE-EecchHHhhhccccc-CCc--------
Confidence 99999999999999999 5555433 34456899999977532 234 344467899999877 222
Q ss_pred CCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC
Q 021657 230 NYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP 287 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~ 287 (309)
. ........++.+++-|+.+.++ ++-.++.+..|=+..+.+.|
T Consensus 307 ------~-asiEpt~~lND~C~~p~sGm~f--------~Ane~~~m~~yyiP~LGPaP 349 (703)
T KOG2321|consen 307 ------M-ASIEPTSDLNDFCFVPGSGMFF--------TANESSKMHTYYIPSLGPAP 349 (703)
T ss_pred ------e-eeccccCCcCceeeecCCceEE--------EecCCCcceeEEccccCCCc
Confidence 2 2233455699999999777555 44444788888777654443
No 254
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.39 E-value=3.1e-10 Score=91.40 Aligned_cols=170 Identities=12% Similarity=0.175 Sum_probs=110.5
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-CCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS-ADN 159 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg 159 (309)
.+.+..+......-..+.|+|++ +++++++.||.|.++|+.+.+ .+...... ....++++++ ++++++++. .++
T Consensus 26 ~~~~~~i~~~~~~h~~~~~s~Dg-r~~yv~~rdg~vsviD~~~~~--~v~~i~~G-~~~~~i~~s~-DG~~~~v~n~~~~ 100 (369)
T PF02239_consen 26 NKVVARIPTGGAPHAGLKFSPDG-RYLYVANRDGTVSVIDLATGK--VVATIKVG-GNPRGIAVSP-DGKYVYVANYEPG 100 (369)
T ss_dssp -SEEEEEE-STTEEEEEE-TT-S-SEEEEEETTSEEEEEETTSSS--EEEEEE-S-SEEEEEEE---TTTEEEEEEEETT
T ss_pred CeEEEEEcCCCCceeEEEecCCC-CEEEEEcCCCeEEEEECCccc--EEEEEecC-CCcceEEEcC-CCCEEEEEecCCC
Confidence 33444554443334457799998 677777899999999999988 56666543 4568899999 999888775 589
Q ss_pred cEEEEecCCCCCCCCCCceeeeccC-------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGH-------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
.+.++|.++ .+++..+... ...+..|..+|....++++--+.+.|.+-|......
T Consensus 101 ~v~v~D~~t------le~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~------------ 162 (369)
T PF02239_consen 101 TVSVIDAET------LEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKN------------ 162 (369)
T ss_dssp EEEEEETTT--------EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSC------------
T ss_pred ceeEecccc------ccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccc------------
Confidence 999999999 7888877532 345778888888885454555568888888776311
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+............+..|+|++.+++++.... +.|-++|...
T Consensus 163 --~~~~~i~~g~~~~D~~~dpdgry~~va~~~s-------n~i~viD~~~ 203 (369)
T PF02239_consen 163 --LKVTTIKVGRFPHDGGFDPDGRYFLVAANGS-------NKIAVIDTKT 203 (369)
T ss_dssp --EEEEEEE--TTEEEEEE-TTSSEEEEEEGGG-------TEEEEEETTT
T ss_pred --cceeeecccccccccccCcccceeeeccccc-------ceeEEEeecc
Confidence 1222223344567899999999988765554 6899999884
No 255
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.39 E-value=1.4e-09 Score=87.55 Aligned_cols=213 Identities=10% Similarity=0.148 Sum_probs=131.9
Q ss_pred EEEEECCCCCEEEEecC----CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 13 FALAMCPTEPYVLSGGK----DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
.-++++|++++|.+... +|.|..|++.... .+...+....
T Consensus 40 s~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~------------------------------------g~L~~~~~~~ 83 (345)
T PF10282_consen 40 SWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDT------------------------------------GTLTLLNSVP 83 (345)
T ss_dssp CCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTT------------------------------------TEEEEEEEEE
T ss_pred ceEEEEeCCCEEEEEEccccCCCCEEEEEECCCc------------------------------------ceeEEeeeec
Confidence 45778888888877665 5678888876420 0111222222
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEE--Eee----------ccCCceeEEEeccCCCCeEEEEc
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK--VEK----------AHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~----------~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
........++++|++..++++...+|.|.++++......... ... .......++.++| +++++++..
T Consensus 84 ~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p-dg~~v~v~d 162 (345)
T PF10282_consen 84 SGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP-DGRFVYVPD 162 (345)
T ss_dssp ESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T-TSSEEEEEE
T ss_pred cCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECC-CCCEEEEEe
Confidence 233455679999999555666667999999999874311111 110 1234578999999 888777754
Q ss_pred C-CCcEEEEecCCCCCCCCCCc--eeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 157 A-DNSVRMFDRRNLTSNGVGSP--INKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 157 ~-dg~i~i~d~~~~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
. ...|++|++.... ++. ...+. ......+.++|+|++++++++.-.++.|.+|++.........
T Consensus 163 lG~D~v~~~~~~~~~----~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~-------- 230 (345)
T PF10282_consen 163 LGADRVYVYDIDDDT----GKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTE-------- 230 (345)
T ss_dssp TTTTEEEEEEE-TTS-----TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEE--------
T ss_pred cCCCEEEEEEEeCCC----ceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeE--------
Confidence 3 4589999998732 112 12222 234567899999999999989989999999999831111110
Q ss_pred Cceeeeec---CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 233 AGLFFQHA---GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 233 ~~~~~~~~---~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+.+..+. ........++++|++++++++.-.. +.|.+|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~-------~sI~vf~~d 275 (345)
T PF10282_consen 231 IQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGS-------NSISVFDLD 275 (345)
T ss_dssp EEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTT-------TEEEEEEEC
T ss_pred EEEeeeccccccccCCceeEEEecCCCEEEEEeccC-------CEEEEEEEe
Confidence 01111111 1112578899999999999866544 799999995
No 256
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.39 E-value=1.9e-11 Score=92.17 Aligned_cols=252 Identities=17% Similarity=0.263 Sum_probs=143.2
Q ss_pred ceEEEEECCCCC--EEEEecCCCcEEEEeCCccccccccCCccccccCCC-CceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCPTEP--YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSS-GSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~--~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
.|..+.|.++++ .++..+.|.+|++|.+.................... ..+.....+..+.. ....+.+.+
T Consensus 86 KinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~------vea~prRv~ 159 (433)
T KOG1354|consen 86 KINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLE------VEASPRRVY 159 (433)
T ss_pred hhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccce------eeeeeeeec
Confidence 478889988764 577888899999999976532221100000000000 00000000000000 011122222
Q ss_pred -ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-eEEEeecc-----CCceeEEEeccCCCCeEEEEcCCCc
Q 021657 88 -NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-VIKVEKAH-----DADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 88 -~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
..|+-.|+++.++.|. ..++++ +|-.|.+|+++-..+. -+.-.+.+ ..-|++..|+|...+.|+-.+..|+
T Consensus 160 aNaHtyhiNSIS~NsD~-Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGt 237 (433)
T KOG1354|consen 160 ANAHTYHINSISVNSDK-ETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGT 237 (433)
T ss_pred cccceeEeeeeeecCcc-ceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCc
Confidence 4688899999999988 556554 6789999998754321 11122222 2458899999988889999999999
Q ss_pred EEEEecCCCCCCCCCCcee----------eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC
Q 021657 161 VRMFDRRNLTSNGVGSPIN----------KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 230 (309)
|++.|+|..........+. -|..--..|..+.|+++|++++ +-. --+|++||+....++....+....
T Consensus 238 IrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryil-sRD-yltvk~wD~nme~~pv~t~~vh~~ 315 (433)
T KOG1354|consen 238 IRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYIL-SRD-YLTVKLWDLNMEAKPVETYPVHEY 315 (433)
T ss_pred EEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEE-Eec-cceeEEEeccccCCcceEEeehHh
Confidence 9999999632110011111 1111224678899999999754 433 378999999775554332221110
Q ss_pred CCCceeeeecCCCcc---eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 231 YPAGLFFQHAGHRDK---VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
-...+ ..+.. +.. -..++|+-++.+++ ||+..+.++++++..
T Consensus 316 lr~kL-c~lYE-nD~IfdKFec~~sg~~~~v~--------TGsy~n~frvf~~~~ 360 (433)
T KOG1354|consen 316 LRSKL-CSLYE-NDAIFDKFECSWSGNDSYVM--------TGSYNNVFRVFNLAR 360 (433)
T ss_pred HHHHH-HHHhh-ccchhheeEEEEcCCcceEe--------cccccceEEEecCCC
Confidence 00000 00000 112 24678888777655 666679999999653
No 257
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.35 E-value=3.7e-09 Score=80.69 Aligned_cols=220 Identities=12% Similarity=0.180 Sum_probs=138.1
Q ss_pred EEEEECCCCCEEEEecC-CCcEEEEeCCcc-ccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 13 FALAMCPTEPYVLSGGK-DKSVVLWSIQDH-ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~-dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+-++++++|++|+++.. -|.|.++-++.. ........ .. .++.-.. -+.-
T Consensus 92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~--------------------------~~-h~g~~p~-~rQ~ 143 (346)
T COG2706 92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQV--------------------------VK-HTGSGPH-ERQE 143 (346)
T ss_pred eEEEECCCCCEEEEEEccCceEEEEEcccCCccccceee--------------------------ee-cCCCCCC-cccc
Confidence 57889999999888775 578888888642 00000000 00 0000000 0001
Q ss_pred cCCeEEEEEecCCCcEEEEEc-CCCeEEEEEcCCCCcceEEE-eeccCCceeEEEeccCCCCeEEEEc-CCCcEEEEecC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKV-EKAHDADLHCVDWNPLDDNLILTGS-ADNSVRMFDRR 167 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~ 167 (309)
...+....+.|++ ++|++.. .--.|.+|++..+....... .......-+-|.|+| ++++..+.. .+++|.+|...
T Consensus 144 ~~h~H~a~~tP~~-~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHp-n~k~aY~v~EL~stV~v~~y~ 221 (346)
T COG2706 144 SPHVHSANFTPDG-RYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHP-NGKYAYLVNELNSTVDVLEYN 221 (346)
T ss_pred CCccceeeeCCCC-CEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcC-CCcEEEEEeccCCEEEEEEEc
Confidence 1226778899999 6666654 33469999998766322111 113345678999999 888766555 48999999988
Q ss_pred CCCCCCCCCceeeecc------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 168 NLTSNGVGSPINKFEG------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
... +..+.++.+.. .......|.+++||++|+|+--....|.+|.+...+..+ ..+.....
T Consensus 222 ~~~--g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L-----------~~~~~~~t 288 (346)
T COG2706 222 PAV--GKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKL-----------ELVGITPT 288 (346)
T ss_pred CCC--ceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEE-----------EEEEEecc
Confidence 631 00222222221 234567899999999988777667789999998754432 23333444
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+...-....++|.+.+|+|+.-+. ..|.+|..+.
T Consensus 289 eg~~PR~F~i~~~g~~Liaa~q~s-------d~i~vf~~d~ 322 (346)
T COG2706 289 EGQFPRDFNINPSGRFLIAANQKS-------DNITVFERDK 322 (346)
T ss_pred CCcCCccceeCCCCCEEEEEccCC-------CcEEEEEEcC
Confidence 555678999999998877654443 6799999984
No 258
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.35 E-value=6.1e-10 Score=81.39 Aligned_cols=152 Identities=9% Similarity=0.043 Sum_probs=107.5
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceee--ec
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK--FE 182 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~ 182 (309)
..+..++.|.++++.+++-+........ ..-.+.++++++ ++.++++.+....|..|.+... ++.+.. ..
T Consensus 129 ~~~~i~sndht~k~~~~~~~s~~~~~h~--~~~~~ns~~~sn-d~~~~~~Vgds~~Vf~y~id~~-----sey~~~~~~a 200 (344)
T KOG4532|consen 129 FPLNIASNDHTGKTMVVSGDSNKFAVHN--QNLTQNSLHYSN-DPSWGSSVGDSRRVFRYAIDDE-----SEYIENIYEA 200 (344)
T ss_pred cceeeccCCcceeEEEEecCcccceeec--cccceeeeEEcC-CCceEEEecCCCcceEEEeCCc-----cceeeeeEec
Confidence 3466778888888888865542222221 113488999999 9999999999999999999874 233222 23
Q ss_pred cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC--eEEE
Q 021657 183 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP--WTVV 260 (309)
Q Consensus 183 ~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~ 260 (309)
.....-.+..|+.... .+|++..||++.|||++..+.+... .-.+...|.+.+..+.|++.|. .|+.
T Consensus 201 ~t~D~gF~~S~s~~~~-~FAv~~Qdg~~~I~DVR~~~tpm~~----------~sstrp~hnGa~R~c~Fsl~g~lDLLf~ 269 (344)
T KOG4532|consen 201 PTSDHGFYNSFSENDL-QFAVVFQDGTCAIYDVRNMATPMAE----------ISSTRPHHNGAFRVCRFSLYGLLDLLFI 269 (344)
T ss_pred ccCCCceeeeeccCcc-eEEEEecCCcEEEEEecccccchhh----------hcccCCCCCCceEEEEecCCCcceEEEE
Confidence 3344456788998888 5899999999999999986655432 1122345889999999998664 3554
Q ss_pred EecCCCCCCCCCCeEEEEEcccc
Q 021657 261 SVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 261 s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
+-.. +.+.+-|++++
T Consensus 270 sEhf--------s~~hv~D~R~~ 284 (344)
T KOG4532|consen 270 SEHF--------SRVHVVDTRNY 284 (344)
T ss_pred ecCc--------ceEEEEEcccC
Confidence 4444 68999999865
No 259
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.34 E-value=4.7e-10 Score=93.30 Aligned_cols=165 Identities=13% Similarity=0.214 Sum_probs=105.0
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCC---CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE-EEcCCC-
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDD---SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL-TGSADN- 159 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg- 159 (309)
..+..+...+....|+|+| +.|+.+..+ ..|++||+.+++. ..+..+...+.+++|+| +++.|+ +.+.++
T Consensus 183 ~~l~~~~~~~~~p~~Spdg-~~la~~~~~~~~~~i~v~d~~~g~~---~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~ 257 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDG-QKLAYVSFESGKPEIYVQDLATGQR---EKVASFPGMNGAPAFSP-DGSKLAVSLSKDGN 257 (417)
T ss_pred EEeecCCCceecccCCCCC-CEEEEEEcCCCCcEEEEEECCCCCE---EEeecCCCCccceEECC-CCCEEEEEECCCCC
Confidence 3344466678889999999 555554432 4799999988762 22334556677899999 887665 445444
Q ss_pred -cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 160 -SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 160 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
.|++||+.+ +. ...+..+........|+|+|++++.+...++ .|+++|+.. ++ .
T Consensus 258 ~~i~~~d~~~------~~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~-~~---------------~ 314 (417)
T TIGR02800 258 PDIYVMDLDG------KQ-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG-GE---------------V 314 (417)
T ss_pred ccEEEEECCC------CC-EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC-CC---------------E
Confidence 588888876 33 3344444444557789999998765555454 466666654 11 1
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+..+...+..+.|+|++.+++.+.... ....|.+||+..
T Consensus 315 ~~l~~~~~~~~~~~~spdg~~i~~~~~~~-----~~~~i~~~d~~~ 355 (417)
T TIGR02800 315 RRLTFRGGYNASPSWSPDGDLIAFVHREG-----GGFNIAVMDLDG 355 (417)
T ss_pred EEeecCCCCccCeEECCCCCEEEEEEccC-----CceEEEEEeCCC
Confidence 12223345567889999998777654321 123788888763
No 260
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.34 E-value=5.6e-10 Score=89.46 Aligned_cols=155 Identities=15% Similarity=0.360 Sum_probs=105.5
Q ss_pred EEEEEecCCCcEEEEEcC-----------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE--EcCCCcE
Q 021657 95 EDVTFCPSSAQEFCSVGD-----------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT--GSADNSV 161 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i 161 (309)
..+.|++-|..+|+.++. ..++++.++. +. .........++|.++.|+| ++..|++ |..-..+
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~--s~~V~L~k~GPVhdv~W~~-s~~EF~VvyGfMPAkv 296 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GE--SVSVPLLKEGPVHDVTWSP-SGREFAVVYGFMPAKV 296 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEec-Cc--eEEEecCCCCCceEEEECC-CCCEEEEEEecccceE
Confidence 357788776555554443 2467788876 33 2223234478999999999 8876655 4556889
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC--CcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED--GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|||++ +.++..+. .++=+++-|+|.|+.++.+|-.+ |.|.|||+.+. .++..+
T Consensus 297 tifnlr-------~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~---------------K~i~~~ 352 (566)
T KOG2315|consen 297 TIFNLR-------GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR---------------KLIAKF 352 (566)
T ss_pred EEEcCC-------CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccch---------------hhcccc
Confidence 999998 67777775 56778999999999776555443 88999999982 233333
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
... ..+-+.|+|+|.+++.+...- ==-.|+.++||++.
T Consensus 353 ~a~--~tt~~eW~PdGe~flTATTaP--RlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 353 KAA--NTTVFEWSPDGEYFLTATTAP--RLRVDNGIKIWHYT 390 (566)
T ss_pred ccC--CceEEEEcCCCcEEEEEeccc--cEEecCCeEEEEec
Confidence 332 346689999999877532110 00246999999997
No 261
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.32 E-value=2.2e-11 Score=88.35 Aligned_cols=217 Identities=14% Similarity=0.233 Sum_probs=126.2
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
.+|.+-.|+.+.++.+ -.|+++..++.+.........+...... .....+.
T Consensus 32 ~~~~d~~~~~~~~v~~-~~lf~~e~~~~~ss~g~~r~~~~~~~~r----------------------------t~~i~~~ 82 (319)
T KOG4714|consen 32 MQHADVKLSKVSLSAE-YILFTGETSSQIISLGKGRGRCISLWER----------------------------DDGIDPF 82 (319)
T ss_pred ccccceEEEEeechhh-heeecccchhheeeeccceEEEechhhc----------------------------ccCcCce
Confidence 3455544566666543 3567777777776666544322111110 0011223
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCCCCeEEEEcC-----C
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTGSA-----D 158 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~-----d 158 (309)
..+..|+++-.+-..+-.+ +.+++++.||.+.+.+.+.... ...... .|.+ --+.++.. .++.+.++.. -
T Consensus 83 ~~~a~~sep~p~~~~s~~~-t~V~~~~~dg~~~v~s~~~~~~-~~~~i~~~~~~-~as~~~~~-~~~~i~s~~~g~~n~~ 158 (319)
T KOG4714|consen 83 KVLAKNSEIDPNDACTMTD-NRVCIGYADGSLAVFSTDKDLA-LMSRIPSIHSG-SASRKICR-HGNSILSGGCGNWNAQ 158 (319)
T ss_pred eeeeccCCCCCcccccccC-CceEecCCCceEEEEechHHHh-hhhhccccccc-ccccceee-cccEEecCCcceEeec
Confidence 3333444332222223233 5699999999999999865221 111111 1111 11222222 3444444321 1
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+..+.|+++.. ...+...+. ...|.+++-+|...+++++|++||.+-+||.++... +...
T Consensus 159 d~~~a~~~~p~-----~t~~~~~~~-~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~--------------p~S~ 218 (319)
T KOG4714|consen 159 DNFYANTLDPI-----KTLIPSKKA-LDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAM--------------PVSL 218 (319)
T ss_pred cceeeeccccc-----ccccccccc-cccchhhhCCcccccEEEEecCCCeEEEEEcccccc--------------hHHH
Confidence 34556666542 111111222 234999999999999999999999999999998322 3445
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+..|..+++.+.|+|.++.-+.++|+| |.+..||.+
T Consensus 219 l~ahk~~i~eV~FHpk~p~~Lft~sed-------Gslw~wdas 254 (319)
T KOG4714|consen 219 LKAHKAEIWEVHFHPKNPEHLFTCSED-------GSLWHWDAS 254 (319)
T ss_pred HHHhhhhhhheeccCCCchheeEecCC-------CcEEEEcCC
Confidence 688999999999999988777766666 999999987
No 262
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.30 E-value=6.7e-10 Score=91.71 Aligned_cols=185 Identities=11% Similarity=0.018 Sum_probs=106.0
Q ss_pred CcccCCCCCcCcccccccccCCeEEEEEecCCCc--EEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccC
Q 021657 72 NDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQ--EFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147 (309)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 147 (309)
.+.+.+.....+. .+......+.+-.|+|+|.. ++++...+| .|.+.++..++...+. .........+|+|
T Consensus 166 ~l~~~d~dG~~~~-~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt---~~~g~~~~p~wSP- 240 (428)
T PRK01029 166 ELWSVDYDGQNLR-PLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL---ALQGNQLMPTFSP- 240 (428)
T ss_pred eEEEEcCCCCCce-EcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee---cCCCCccceEECC-
Confidence 4445554444333 33334556677899999854 333555444 5777788877633333 2344456789999
Q ss_pred CCCeEEEEcC-CC----cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccc
Q 021657 148 DDNLILTGSA-DN----SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 148 ~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
+|+.|+..+. +| .+.+|++..... +................+|+|||++|+.+...+|...+|.+.....
T Consensus 241 DG~~Laf~s~~~g~~di~~~~~~~~~g~~---g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~-- 315 (428)
T PRK01029 241 RKKLLAFISDRYGNPDLFIQSFSLETGAI---GKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE-- 315 (428)
T ss_pred CCCEEEEEECCCCCcceeEEEeecccCCC---CcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc--
Confidence 8887776542 23 334466654110 2222222222234467899999998765665677666665432110
Q ss_pred cCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 223 EQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
......+..+...+....|+|++.+++.+...+ ....|.+||+.
T Consensus 316 ----------g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~-----g~~~I~v~dl~ 359 (428)
T PRK01029 316 ----------GQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIK-----GVRQICVYDLA 359 (428)
T ss_pred ----------ccceEEeccCCCCccceeECCCCCEEEEEEcCC-----CCcEEEEEECC
Confidence 001112233344667889999999877655432 13579999987
No 263
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=8.9e-10 Score=91.83 Aligned_cols=177 Identities=12% Similarity=0.140 Sum_probs=108.8
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCC--CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCC
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDD--SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN 150 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 150 (309)
+.+++..... .+.+..+...+....|+|+|+.++++...+ ..|.+||+.+++. ..+......+....|+| +++
T Consensus 181 l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~---~~l~~~~g~~~~~~~Sp-DG~ 255 (430)
T PRK00178 181 LQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRR---EQITNFEGLNGAPAWSP-DGS 255 (430)
T ss_pred EEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCE---EEccCCCCCcCCeEECC-CCC
Confidence 4455554433 344556677889999999994444444333 4689999988762 22233344556789999 888
Q ss_pred eEE-EEcCCC--cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc--EEEEeCCcccccccCC
Q 021657 151 LIL-TGSADN--SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL--LNIWDYEKVGKKVEQG 225 (309)
Q Consensus 151 ~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~--i~iwd~~~~~~~~~~~ 225 (309)
.|+ +...+| .|++||+.+ +. ...+..+........|+|||+.++.+...+|. |+++|+.. ++..
T Consensus 256 ~la~~~~~~g~~~Iy~~d~~~------~~-~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~-g~~~--- 324 (430)
T PRK00178 256 KLAFVLSKDGNPEIYVMDLAS------RQ-LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG-GRAE--- 324 (430)
T ss_pred EEEEEEccCCCceEEEEECCC------CC-eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC-CCEE---
Confidence 776 444555 588889886 43 33444445556678999999987666655554 55566554 1110
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+ ...+ .......|+|++.+++.+...+ ....|.+||+..
T Consensus 325 ---------~l-t~~~--~~~~~~~~Spdg~~i~~~~~~~-----~~~~l~~~dl~t 364 (430)
T PRK00178 325 ---------RV-TFVG--NYNARPRLSADGKTLVMVHRQD-----GNFHVAAQDLQR 364 (430)
T ss_pred ---------Ee-ecCC--CCccceEECCCCCEEEEEEccC-----CceEEEEEECCC
Confidence 11 1111 2234578999999877655432 123588888873
No 264
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.29 E-value=9.4e-12 Score=99.74 Aligned_cols=173 Identities=23% Similarity=0.347 Sum_probs=120.0
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
++.+.||+. .|..++--.+.+-+++++.|++|++|.++..-.. ..+
T Consensus 728 L~nf~GH~~-~iRai~AidNENSFiSASkDKTVKLWSik~EgD~---------------------------------~~t 773 (1034)
T KOG4190|consen 728 LCNFTGHQE-KIRAIAAIDNENSFISASKDKTVKLWSIKPEGDE---------------------------------IGT 773 (1034)
T ss_pred eecccCcHH-HhHHHHhcccccceeeccCCceEEEEEeccccCc---------------------------------ccc
Confidence 356789998 7888877667788999999999999999742110 112
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-CCCeEEEE-cCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDNLILTG-SAD 158 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~-~~d 158 (309)
..+..++..|+.+|.++.|..+. +.+++ -||-|.+||.--++...........+.+..+..-|. +...+++| +..
T Consensus 774 saCQfTY~aHkk~i~~igfL~~l-r~i~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsae 850 (1034)
T KOG4190|consen 774 SACQFTYQAHKKPIHDIGFLADL-RSIAS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAE 850 (1034)
T ss_pred ceeeeEhhhccCcccceeeeecc-ceeee--ccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccch
Confidence 22445678899999999999876 55655 478899999765552111111111222333333331 33444444 778
Q ss_pred CcEEEEecCCCCCCCCCCceeeec-----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFE-----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+++++|.|. ..-...++ +.+..+.+++..+.|++ +|++-.+|.|.+.|.++
T Consensus 851 STVKl~DaRs------ce~~~E~kVcna~~Pna~~R~iaVa~~GN~-lAa~LSnGci~~LDaR~ 907 (1034)
T KOG4190|consen 851 STVKLFDARS------CEWTCELKVCNAPGPNALTRAIAVADKGNK-LAAALSNGCIAILDARN 907 (1034)
T ss_pred hhheeeeccc------ccceeeEEeccCCCCchheeEEEeccCcch-hhHHhcCCcEEEEecCC
Confidence 9999999998 55555543 34456899999999998 57888899999999998
No 265
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.27 E-value=7.3e-11 Score=90.69 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=109.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc--------CCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT--------DPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+..+..++.+++||.+..+....++++......... .+.......................+.++.... ..
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~-~~ 143 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS-GR 143 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccc-cC
Confidence 445667888999999988888878887654321110 000111111122222222233334455555554 44
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
...+.+|-..+++++|+||+ ++++++..|..|++-.....- .......+|..-|..++.-+ +..|++|+.|+++++
T Consensus 144 ~~~~lGhvSml~dVavS~D~-~~IitaDRDEkIRvs~ypa~f-~IesfclGH~eFVS~isl~~--~~~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 144 CEPILGHVSMLLDVAVSPDD-QFIITADRDEKIRVSRYPATF-VIESFCLGHKEFVSTISLTD--NYLLLSGSGDKTLRL 219 (390)
T ss_pred cchhhhhhhhhheeeecCCC-CEEEEecCCceEEEEecCccc-chhhhccccHhheeeeeecc--CceeeecCCCCcEEE
Confidence 45667899999999999998 899999999999998765433 23344568999999999986 566999999999999
Q ss_pred EecCCCCCCCCCCceeeec
Q 021657 164 FDRRNLTSNGVGSPINKFE 182 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~ 182 (309)
||+++ ++.+.++.
T Consensus 220 Wd~~s------gk~L~t~d 232 (390)
T KOG3914|consen 220 WDITS------GKLLDTCD 232 (390)
T ss_pred Eeccc------CCcccccc
Confidence 99999 77776665
No 266
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=99.27 E-value=1.6e-11 Score=92.52 Aligned_cols=155 Identities=20% Similarity=0.321 Sum_probs=111.3
Q ss_pred EEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCC
Q 021657 108 CSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 187 (309)
Q Consensus 108 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 187 (309)
++.+.+-.|-+-|++++- ...+. ..+.|.+++|.. .+++++.|..+|.|..+|+|...+.. +.+.+.+. |...
T Consensus 228 fs~G~sqqv~L~nvetg~---~qsf~-sksDVfAlQf~~-s~nLv~~GcRngeI~~iDLR~rnqG~-~~~a~rly-h~Ss 300 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGH---QQSFQ-SKSDVFALQFAG-SDNLVFNGCRNGEIFVIDLRCRNQGN-GWCAQRLY-HDSS 300 (425)
T ss_pred ecccccceeEEEEeeccc---ccccc-cchhHHHHHhcc-cCCeeEecccCCcEEEEEeeecccCC-CcceEEEE-cCcc
Confidence 445566778888998877 33443 577899999998 89999999999999999999853322 45555565 7889
Q ss_pred eeEEEEec-CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee--EEEccCCCeEEEEecC
Q 021657 188 VLCVQWSP-DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD--FHWNASDPWTVVSVSD 264 (309)
Q Consensus 188 v~~~~~~~-~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~s~s~ 264 (309)
|+++..-. ++++| ++.+.+|.|++||++..+.. ..+..+.||-..-.- +...+.... ++++++
T Consensus 301 vtslq~Lq~s~q~L-maS~M~gkikLyD~R~~K~~------------~~V~qYeGHvN~~a~l~~~v~~eeg~-I~s~Gd 366 (425)
T KOG2695|consen 301 VTSLQILQFSQQKL-MASDMTGKIKLYDLRATKCK------------KSVMQYEGHVNLSAYLPAHVKEEEGS-IFSVGD 366 (425)
T ss_pred hhhhhhhccccceE-eeccCcCceeEeeehhhhcc------------cceeeeecccccccccccccccccce-EEEccC
Confidence 99998877 67765 47788999999999983332 236677787654333 334455554 444555
Q ss_pred CCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 265 DCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 265 d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
| -..+||.+. .+.++.+++
T Consensus 367 D-------cytRiWsl~------~ghLl~tip 385 (425)
T KOG2695|consen 367 D-------CYTRIWSLD------SGHLLCTIP 385 (425)
T ss_pred e-------eEEEEEecc------cCceeeccC
Confidence 4 799999999 566555554
No 267
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=2.3e-09 Score=89.25 Aligned_cols=163 Identities=12% Similarity=0.139 Sum_probs=98.1
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE-EcCCCc--E
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT-GSADNS--V 161 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~--i 161 (309)
+..+...+.+..|+|+|..++++...++ .|.+||+.+++... +..........+|+| +++.|+. ...+|. |
T Consensus 213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~---lt~~~g~~~~~~wSP-DG~~La~~~~~~g~~~I 288 (448)
T PRK04792 213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK---VTSFPGINGAPRFSP-DGKKLALVLSKDGQPEI 288 (448)
T ss_pred eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE---ecCCCCCcCCeeECC-CCCEEEEEEeCCCCeEE
Confidence 3345667889999999944444443333 58888988776322 222233445789999 8886654 556665 7
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEE--EeCCcccccccCCCCCcCCCCceeeee
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI--WDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
+++|+.+ ++ ...+..+.......+|+|||++++.+...++...+ +|+.. ++. ..+ ..
T Consensus 289 y~~dl~t------g~-~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~-g~~------------~~L-t~ 347 (448)
T PRK04792 289 YVVDIAT------KA-LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS-GKV------------SRL-TF 347 (448)
T ss_pred EEEECCC------CC-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC-CCE------------EEE-ec
Confidence 7778876 43 34444445556778999999987766655555444 45543 111 111 11
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+ ......+|+|++.+++.+...+ ....|.++|+.
T Consensus 348 ~g--~~~~~~~~SpDG~~l~~~~~~~-----g~~~I~~~dl~ 382 (448)
T PRK04792 348 EG--EQNLGGSITPDGRSMIMVNRTN-----GKFNIARQDLE 382 (448)
T ss_pred CC--CCCcCeeECCCCCEEEEEEecC-----CceEEEEEECC
Confidence 22 2234578999999877754432 11245556655
No 268
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=8.9e-09 Score=84.61 Aligned_cols=157 Identities=13% Similarity=0.009 Sum_probs=91.5
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCC--CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-CCC--cEEEE
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDD--SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS-ADN--SVRMF 164 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg--~i~i~ 164 (309)
..+......|+|+|..++++.+.+ ..|.++|+..++ ...+..+........|+| +++.++..+ ..+ .|.++
T Consensus 231 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~---~~~LT~~~~~d~~p~~SP-DG~~I~F~Sdr~g~~~Iy~~ 306 (419)
T PRK04043 231 SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT---LTQITNYPGIDVNGNFVE-DDKRIVFVSDRLGYPNIFMK 306 (419)
T ss_pred CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc---EEEcccCCCccCccEECC-CCCEEEEEECCCCCceEEEE
Confidence 344456678999996666666544 467777887665 223333333344568999 887666554 333 57777
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC--------CcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED--------GLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|+.. ++..+... .... ...|+|||++++.+...+ ..|.+.|+... ..
T Consensus 307 dl~~------g~~~rlt~-~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g-~~--------------- 361 (419)
T PRK04043 307 KLNS------GSVEQVVF-HGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSD-YI--------------- 361 (419)
T ss_pred ECCC------CCeEeCcc-CCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCC-Ce---------------
Confidence 8776 44322221 1111 248999999876666543 35777777651 11
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+... .......|+|++..++.+... +....+.+.++.
T Consensus 362 ~~LT~~-~~~~~p~~SPDG~~I~f~~~~-----~~~~~L~~~~l~ 400 (419)
T PRK04043 362 RRLTAN-GVNQFPRFSSDGGSIMFIKYL-----GNQSALGIIRLN 400 (419)
T ss_pred EECCCC-CCcCCeEECCCCCEEEEEEcc-----CCcEEEEEEecC
Confidence 111111 122358899999987766432 223456667766
No 269
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.23 E-value=2.4e-10 Score=83.02 Aligned_cols=97 Identities=21% Similarity=0.331 Sum_probs=72.8
Q ss_pred CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEE
Q 021657 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQW 193 (309)
Q Consensus 114 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 193 (309)
+..++|+++..+. ..........|++++-+|...+.+++|+.||.+-+||.|+. ..+...+..|+.++..+-|
T Consensus 159 d~~~a~~~~p~~t--~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~-----~~p~S~l~ahk~~i~eV~F 231 (319)
T KOG4714|consen 159 DNFYANTLDPIKT--LIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV-----AMPVSLLKAHKAEIWEVHF 231 (319)
T ss_pred cceeeeccccccc--ccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccc-----cchHHHHHHhhhhhhheec
Confidence 3456677654442 11112223349999999966778889999999999999984 4567778899999999999
Q ss_pred ecCCCcEEEEecCCCcEEEEeCCc
Q 021657 194 SPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 194 ~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+|...--|.++++||.+..||...
T Consensus 232 Hpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 232 HPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cCCCchheeEecCCCcEEEEcCCC
Confidence 996543345999999999999874
No 270
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.20 E-value=6.5e-10 Score=85.59 Aligned_cols=158 Identities=17% Similarity=0.202 Sum_probs=100.5
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc--ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
...+..++.+ .++|.+..+....++++..... ...... .-...-+++.+.. +......+..-|.++-+|+-...
T Consensus 65 ~~~~~~s~~~-~llAv~~~~K~~~~f~~~~~~~~~kl~~~~-~v~~~~~ai~~~~-~~~sv~v~dkagD~~~~di~s~~- 140 (390)
T KOG3914|consen 65 PALVLTSDSG-RLVAVATSSKQRAVFDYRENPKGAKLLDVS-CVPKRPTAISFIR-EDTSVLVADKAGDVYSFDILSAD- 140 (390)
T ss_pred ccccccCCCc-eEEEEEeCCCceEEEEEecCCCcceeeeEe-ecccCcceeeeee-ccceEEEEeecCCceeeeeeccc-
Confidence 3445556666 7888888887777777765442 111111 1122334445544 44444444444555544444321
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 251 (309)
..+...+-+|-.-++.++|+||++++ .++..|..|++-........ -.-.-||..-|..++.
T Consensus 141 ---~~~~~~~lGhvSml~dVavS~D~~~I-itaDRDEkIRvs~ypa~f~I--------------esfclGH~eFVS~isl 202 (390)
T KOG3914|consen 141 ---SGRCEPILGHVSMLLDVAVSPDDQFI-ITADRDEKIRVSRYPATFVI--------------ESFCLGHKEFVSTISL 202 (390)
T ss_pred ---ccCcchhhhhhhhhheeeecCCCCEE-EEecCCceEEEEecCcccch--------------hhhccccHhheeeeee
Confidence 12344556788999999999999975 59999999999877651111 1123579999999999
Q ss_pred ccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 252 NASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 252 ~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
-++.. |+ |||.|++|++||+..
T Consensus 203 ~~~~~-Ll--------S~sGD~tlr~Wd~~s 224 (390)
T KOG3914|consen 203 TDNYL-LL--------SGSGDKTLRLWDITS 224 (390)
T ss_pred ccCce-ee--------ecCCCCcEEEEeccc
Confidence 88543 45 777779999999993
No 271
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.20 E-value=1.4e-08 Score=81.82 Aligned_cols=143 Identities=17% Similarity=0.254 Sum_probs=92.8
Q ss_pred eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC---CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEE
Q 021657 115 CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA---DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 191 (309)
Q Consensus 115 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 191 (309)
.+-|+.++....+. ....-...|...+|-| .|+.+++-+. ..++.+|-+.+.. ...+.+..+. +...+.+
T Consensus 426 n~eIfrireKdIpv--e~velke~vi~FaWEP-~gdkF~vi~g~~~k~tvsfY~~e~~~--~~~~lVk~~d--k~~~N~v 498 (698)
T KOG2314|consen 426 NLEIFRIREKDIPV--EVVELKESVIAFAWEP-HGDKFAVISGNTVKNTVSFYAVETNI--KKPSLVKELD--KKFANTV 498 (698)
T ss_pred eEEEEEeeccCCCc--eeeecchheeeeeecc-CCCeEEEEEccccccceeEEEeecCC--Cchhhhhhhc--ccccceE
Confidence 35566665555322 2234567899999999 8877766543 3578999888421 1134455554 3567899
Q ss_pred EEecCCCcEEEEe--cCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCC
Q 021657 192 QWSPDKSSVFGSS--AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDST 269 (309)
Q Consensus 192 ~~~~~~~~l~~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~ 269 (309)
.|+|.|+++++.+ +..|.+..+|+...... ......| ...+.+.|.|.|.+++.+.|.= ..
T Consensus 499 fwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k--------------~~~~~eh-~~at~veWDPtGRYvvT~ss~w--rh 561 (698)
T KOG2314|consen 499 FWSPKGRFVVVAALVSRRGDLEFYDTDYADLK--------------DTASPEH-FAATEVEWDPTGRYVVTSSSSW--RH 561 (698)
T ss_pred EEcCCCcEEEEEEecccccceEEEecchhhhh--------------hccCccc-cccccceECCCCCEEEEeeehh--hh
Confidence 9999999866544 45789999998851111 1111222 3468899999998866554432 45
Q ss_pred CCCCeEEEEEcc
Q 021657 270 GGGGTLQIWRMS 281 (309)
Q Consensus 270 ~~dg~v~vw~~~ 281 (309)
..|.--++|++.
T Consensus 562 k~d~GYri~tfq 573 (698)
T KOG2314|consen 562 KVDNGYRIFTFQ 573 (698)
T ss_pred ccccceEEEEee
Confidence 667889999987
No 272
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.17 E-value=4.3e-10 Score=101.55 Aligned_cols=166 Identities=13% Similarity=0.233 Sum_probs=129.4
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
+-..|.++.-+|.. .+.+||+.||.+++|....++...... ......|+.+.|+. +|+.+..+..||.+.+|...
T Consensus 2207 ~v~~v~r~~sHp~~-~~Yltgs~dgsv~~~~w~~~~~v~~~r-t~g~s~vtr~~f~~-qGnk~~i~d~dg~l~l~q~~-- 2281 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSD-PYYLTGSQDGSVRMFEWGHGQQVVCFR-TAGNSRVTRSRFNH-QGNKFGIVDGDGDLSLWQAS-- 2281 (2439)
T ss_pred ccCceeeecCCCCC-ceEEecCCCceEEEEeccCCCeEEEee-ccCcchhhhhhhcc-cCCceeeeccCCceeecccC--
Confidence 44567788888887 678899999999999988777433333 34448899999999 99999999999999999987
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec---CCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA---EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
.++....+.|+.....+.|-.. ++++++ .++.+.+||....... -....+|.+.+
T Consensus 2282 -----pk~~~s~qchnk~~~Df~Fi~s---~~~tag~s~d~~n~~lwDtl~~~~~--------------s~v~~~H~~ga 2339 (2439)
T KOG1064|consen 2282 -----PKPYTSWQCHNKALSDFRFIGS---LLATAGRSSDNRNVCLWDTLLPPMN--------------SLVHTCHDGGA 2339 (2439)
T ss_pred -----CcceeccccCCccccceeeeeh---hhhccccCCCCCcccchhcccCccc--------------ceeeeecCCCc
Confidence 4678888889998888888763 455654 5788999998763221 12237899999
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
+.+++-|..+.++ |||.+|.|++||++ ..+....++
T Consensus 2340 T~l~~~P~~qlli--------sggr~G~v~l~D~r------qrql~h~~~ 2375 (2439)
T KOG1064|consen 2340 TVLAYAPKHQLLI--------SGGRKGEVCLFDIR------QRQLRHTFQ 2375 (2439)
T ss_pred eEEEEcCcceEEE--------ecCCcCcEEEeehH------HHHHHHHhh
Confidence 9999999766555 77777999999999 666665554
No 273
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.17 E-value=3.5e-08 Score=89.91 Aligned_cols=166 Identities=14% Similarity=0.211 Sum_probs=104.4
Q ss_pred EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec---------------cCCceeEEEeccCCCC-eEEEEcCC
Q 021657 95 EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA---------------HDADLHCVDWNPLDDN-LILTGSAD 158 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~-~l~~~~~d 158 (309)
..++++|+++.++++.+.++.|++||...+. . ..+.+ .-.....|+++| ++. ++++-..+
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~--v-~~~~G~G~~~~~~g~~~~~~~~~~P~GIavsp-dG~~LYVADs~n 761 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGV--T-RVFSGDGYERNLNGSSGTSTSFAQPSGISLSP-DLKELYIADSES 761 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCe--E-EEEecCCccccCCCCccccccccCccEEEEeC-CCCEEEEEECCC
Confidence 5789999654788888889999999987665 1 11111 112456799999 776 55666677
Q ss_pred CcEEEEecCCCCCCCCCCcee-------------eeccC--------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 159 NSVRMFDRRNLTSNGVGSPIN-------------KFEGH--------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~-------------~~~~~--------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+.|++||+.+ +.... .+... -.....++++++|. ++++-..++.|++||...
T Consensus 762 ~~Irv~D~~t------g~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVADs~N~rIrviD~~t 834 (1057)
T PLN02919 762 SSIRALDLKT------GGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVADSYNHKIKKLDPAT 834 (1057)
T ss_pred CeEEEEECCC------CcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEEECCCCEEEEEECCC
Confidence 9999999886 22110 11000 11246889999998 677888899999999876
Q ss_pred ccccccCCCCCc-CCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 218 VGKKVEQGPRTT-NYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.......... ..... ....+.-.....+++++++. ++++-+.+ +.|++||+..
T Consensus 835 -g~v~tiaG~G~~G~~dG--~~~~a~l~~P~GIavd~dG~-lyVaDt~N-------n~Irvid~~~ 889 (1057)
T PLN02919 835 -KRVTTLAGTGKAGFKDG--KALKAQLSEPAGLALGENGR-LFVADTNN-------SLIRYLDLNK 889 (1057)
T ss_pred -CeEEEEeccCCcCCCCC--cccccccCCceEEEEeCCCC-EEEEECCC-------CEEEEEECCC
Confidence 22211100000 00000 00122334578899999886 55544444 8999999974
No 274
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.17 E-value=2e-08 Score=74.48 Aligned_cols=197 Identities=14% Similarity=0.221 Sum_probs=105.5
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
+.++||||+.+||.+...|+|+++|+...... ...+.... ...-..
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf-~I~p~~~~---------------------------------~~d~~~ 92 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSELF-VIPPAMSF---------------------------------PGDLSD 92 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEecccceeE-EcCccccc---------------------------------CCcccc
Confidence 57899999999999999999999998753211 11110000 001234
Q ss_pred CeEEEEEecCC-----CcEEEEEcCCCeEEEEEcCCCC---cceEEE--ee-ccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 93 TVEDVTFCPSS-----AQEFCSVGDDSCLILWDARVGT---SPVIKV--EK-AHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 93 ~v~~~~~~~~~-----~~~l~s~~~dg~i~iwd~~~~~---~~~~~~--~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.|..|.|.+.. ...|+.-..+|.++-|-+..+. ...... +. .+...|.++.|+| ..++|++|+....
T Consensus 93 Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p-~h~LLlVgG~~~~- 170 (282)
T PF15492_consen 93 AIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHP-KHRLLLVGGCEQN- 170 (282)
T ss_pred ceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcC-CCCEEEEeccCCC-
Confidence 45555554321 1345566677888877654321 111222 22 2467899999999 7788777765432
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEE-EEecCCCc------EEEEeCCcccccccCCCCCcCCCCc
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF-GSSAEDGL------LNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~dg~------i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
+. +. -++....+++-..-.+.++.. +....|+. ..+|.+-+ ..
T Consensus 171 -----~~------~~----s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~---------------~~ 220 (282)
T PF15492_consen 171 -----QD------GM----SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPS---------------FK 220 (282)
T ss_pred -----CC------cc----ccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccc---------------ee
Confidence 11 00 011222333333333333221 12221211 12222221 11
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
...........|..|..+|++.. +|+...+ |.|.+|++..+
T Consensus 221 ~fs~~~~~~d~i~kmSlSPdg~~-La~ih~s-------G~lsLW~iPsL 261 (282)
T PF15492_consen 221 FFSRQGQEQDGIFKMSLSPDGSL-LACIHFS-------GSLSLWEIPSL 261 (282)
T ss_pred eeeccccCCCceEEEEECCCCCE-EEEEEcC-------CeEEEEecCcc
Confidence 11112234568999999998875 4444444 99999999843
No 275
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.17 E-value=5.2e-11 Score=62.77 Aligned_cols=36 Identities=22% Similarity=0.564 Sum_probs=34.0
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEe
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWS 37 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd 37 (309)
++++++|.+ .|++|+|+|++.+|++|+.|++|++||
T Consensus 4 ~~~~~~h~~-~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 4 VRTFRGHSS-SINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEESSSS-SEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEcCCCC-cEEEEEEecccccceeeCCCCEEEEEC
Confidence 367899999 899999999999999999999999997
No 276
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=99.15 E-value=3.1e-10 Score=85.78 Aligned_cols=122 Identities=14% Similarity=0.249 Sum_probs=94.0
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC---cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT---SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
..+.|.++.|...+ .++..|+.+|.|..+|++.+. ...... .-|.+.|+++..-..++++|++.+.+|+|.+||+
T Consensus 251 sksDVfAlQf~~s~-nLv~~GcRngeI~~iDLR~rnqG~~~~a~r-lyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~ 328 (425)
T KOG2695|consen 251 SKSDVFALQFAGSD-NLVFNGCRNGEIFVIDLRCRNQGNGWCAQR-LYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDL 328 (425)
T ss_pred cchhHHHHHhcccC-CeeEecccCCcEEEEEeeecccCCCcceEE-EEcCcchhhhhhhccccceEeeccCcCceeEeee
Confidence 45678889998877 889999999999999998762 112223 3588999999987768899999999999999999
Q ss_pred CCCCCCCCCCceeeeccCCCCeeE--EEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLC--VQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
|..+. ++-+.++++|-..-.- +-..+.... ++++++|...+||.++.
T Consensus 329 R~~K~---~~~V~qYeGHvN~~a~l~~~v~~eeg~-I~s~GdDcytRiWsl~~ 377 (425)
T KOG2695|consen 329 RATKC---KKSVMQYEGHVNLSAYLPAHVKEEEGS-IFSVGDDCYTRIWSLDS 377 (425)
T ss_pred hhhhc---ccceeeeecccccccccccccccccce-EEEccCeeEEEEEeccc
Confidence 98322 3348899888654333 334555554 55799999999999997
No 277
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.14 E-value=3.8e-08 Score=79.32 Aligned_cols=260 Identities=10% Similarity=0.079 Sum_probs=150.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccccc--CC--------CCceeecCCCCCCCCcccCCCCC
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSA--GS--------SGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+++..+++++|++++.+. +..++|++.................. .. ...............+.+|+..+
T Consensus 36 ~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet 114 (566)
T KOG2315|consen 36 PCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVET 114 (566)
T ss_pred cceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccceeeeeeecccccccccccccccccCCCCCCCceeeeeecc
Confidence 356788999998777655 56899999887632222211111100 00 00011111122245667788777
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC-C-CeEEE----
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD-D-NLILT---- 154 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-~~l~~---- 154 (309)
......+......-++..|++|. . +++=-..+.+.+|+....+ ...-.-|...|+.+.++| . . ..+++
T Consensus 115 ~~~~s~~q~k~Q~~W~~qfs~dE-s-l~arlv~nev~f~~~~~f~---~~~~kl~~~~i~~f~lSp-gp~~~~vAvyvPe 188 (566)
T KOG2315|consen 115 GVQRSQIQKKMQNGWVPQFSIDE-S-LAARLVSNEVQFYDLGSFK---TIQHKLSVSGITMLSLSP-GPEPPFVAVYVPE 188 (566)
T ss_pred ceehhheehhhhcCcccccccch-h-hhhhhhcceEEEEecCCcc---ceeeeeeccceeeEEecC-CCCCceEEEEccC
Confidence 55444444333333788999886 3 3333345679999987654 222234567778888887 4 2 23332
Q ss_pred -EcCCCcEEEEecCCCCCCC-------------------C--------------------------------CCceeeec
Q 021657 155 -GSADNSVRMFDRRNLTSNG-------------------V--------------------------------GSPINKFE 182 (309)
Q Consensus 155 -~~~dg~i~i~d~~~~~~~~-------------------~--------------------------------~~~~~~~~ 182 (309)
.+.-+.++||......... . ......+
T Consensus 189 ~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L- 267 (566)
T KOG2315|consen 189 KKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL- 267 (566)
T ss_pred CCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-
Confidence 2344567777654210000 0 0111111
Q ss_pred cCCCCeeEEEEecCCCcEE-EEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEE
Q 021657 183 GHSAAVLCVQWSPDKSSVF-GSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVS 261 (309)
Q Consensus 183 ~~~~~v~~~~~~~~~~~l~-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 261 (309)
...++|.++.|+|+++.+. +-|-.-..+.|||++. .+++.+ ..++=+++-|+|.|..++++
T Consensus 268 ~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~----------------~~v~df--~egpRN~~~fnp~g~ii~lA 329 (566)
T KOG2315|consen 268 LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG----------------KPVFDF--PEGPRNTAFFNPHGNIILLA 329 (566)
T ss_pred CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC----------------CEeEeC--CCCCccceEECCCCCEEEEe
Confidence 1368999999999997533 2344667899999986 233333 35667889999999877765
Q ss_pred ecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 262 VSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 262 ~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
| =|.--|.|-|||+. +.+++..+..- ..+-+.|+|
T Consensus 330 G-----FGNL~G~mEvwDv~------n~K~i~~~~a~--~tt~~eW~P 364 (566)
T KOG2315|consen 330 G-----FGNLPGDMEVWDVP------NRKLIAKFKAA--NTTVFEWSP 364 (566)
T ss_pred e-----cCCCCCceEEEecc------chhhccccccC--CceEEEEcC
Confidence 5 23356899999999 66777776642 334455555
No 278
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.13 E-value=1e-07 Score=75.44 Aligned_cols=244 Identities=10% Similarity=0.039 Sum_probs=129.9
Q ss_pred ECCCCCEEEEecC----------CCcEEEEeCCccccccccCCcc-----------ccccCCCCceeecCCCCCCCCccc
Q 021657 17 MCPTEPYVLSGGK----------DKSVVLWSIQDHITSSATDPAT-----------AKSAGSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 17 ~~~~~~~l~t~~~----------dg~i~vwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 75 (309)
++||++.|..+.. +..|.+||..+........... ...........++........+.+
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 8999998776554 8899999999875443322111 112223333334344444556666
Q ss_pred CCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE---eeccCCceeE-EEeccCCCCe
Q 021657 76 ADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV---EKAHDADLHC-VDWNPLDDNL 151 (309)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~-~~~~~~~~~~ 151 (309)
.|..+.+.+..+.--. ...-+..+++. +..-+.||......+.+........ +.....++.. -.|.+.++.+
T Consensus 133 vD~~~~kvv~ei~vp~-~~~vy~t~e~~---~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~ 208 (352)
T TIGR02658 133 VDLEGKAFVRMMDVPD-CYHIFPTANDT---FFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRL 208 (352)
T ss_pred EECCCCcEEEEEeCCC-CcEEEEecCCc---cEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcE
Confidence 6666666555444211 11111111111 1122344444443332221111111 1110000000 0334436777
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeeec-------cCCCCeeEEEEecCCCcEEEEec---------CCCcEEEEeC
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFE-------GHSAAVLCVQWSPDKSSVFGSSA---------EDGLLNIWDY 215 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~---------~dg~i~iwd~ 215 (309)
+.+... |.|.+.|+....... ......+. ...+.+.-++++++++++++... ..+.|.++|.
T Consensus 209 ~~vs~e-G~V~~id~~~~~~~~-~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~ 286 (352)
T TIGR02658 209 VWPTYT-GKIFQIDLSSGDAKF-LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDA 286 (352)
T ss_pred EEEecC-CeEEEEecCCCccee-cceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEEC
Confidence 777665 999999965422100 22222221 12334556999999998886442 2257999998
Q ss_pred CcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC-eEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHh
Q 021657 216 EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP-WTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAE 294 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~ 294 (309)
.+ .+.+..+. -...+..++++|++. .++++... ++.|.+.|.. +.+.+++
T Consensus 287 ~t---------------~kvi~~i~-vG~~~~~iavS~Dgkp~lyvtn~~-------s~~VsViD~~------t~k~i~~ 337 (352)
T TIGR02658 287 KT---------------GKRLRKIE-LGHEIDSINVSQDAKPLLYALSTG-------DKTLYIFDAE------TGKELSS 337 (352)
T ss_pred CC---------------CeEEEEEe-CCCceeeEEECCCCCeEEEEeCCC-------CCcEEEEECc------CCeEEee
Confidence 87 22333332 234789999999998 66664433 3889999998 6666666
Q ss_pred h
Q 021657 295 L 295 (309)
Q Consensus 295 ~ 295 (309)
+
T Consensus 338 i 338 (352)
T TIGR02658 338 V 338 (352)
T ss_pred e
Confidence 6
No 279
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.11 E-value=1.4e-07 Score=74.83 Aligned_cols=117 Identities=15% Similarity=0.224 Sum_probs=88.5
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCC-cEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDK-SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
+|.+ .|.=..+..+++-++.|..|| .+-|+|.+++ ..
T Consensus 357 ~~~~-~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~-----------------------------------------e~ 394 (668)
T COG4946 357 GKKG-GVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGG-----------------------------------------EV 394 (668)
T ss_pred CCCC-ceEEEEEccCCcceEEeccCCceEEEEecCCc-----------------------------------------eE
Confidence 3444 355555666666677777777 6777776643 22
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC----c
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN----S 160 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~ 160 (309)
..+.+.-+.|.++..+++| +.++.+.....|.+.|+.+++ ....-+...+-|+.+.|+| +++++|-+--+| .
T Consensus 395 kr~e~~lg~I~av~vs~dG-K~~vvaNdr~el~vididngn--v~~idkS~~~lItdf~~~~-nsr~iAYafP~gy~tq~ 470 (668)
T COG4946 395 KRIEKDLGNIEAVKVSPDG-KKVVVANDRFELWVIDIDNGN--VRLIDKSEYGLITDFDWHP-NSRWIAYAFPEGYYTQS 470 (668)
T ss_pred EEeeCCccceEEEEEcCCC-cEEEEEcCceEEEEEEecCCC--eeEecccccceeEEEEEcC-CceeEEEecCcceeeee
Confidence 3445566789999999999 778888888999999999998 5555555667899999999 999999887776 5
Q ss_pred EEEEecCC
Q 021657 161 VRMFDRRN 168 (309)
Q Consensus 161 i~i~d~~~ 168 (309)
|+++|+..
T Consensus 471 Iklydm~~ 478 (668)
T COG4946 471 IKLYDMDG 478 (668)
T ss_pred EEEEecCC
Confidence 88999876
No 280
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.11 E-value=3.2e-07 Score=70.35 Aligned_cols=223 Identities=9% Similarity=0.123 Sum_probs=137.3
Q ss_pred CCCcceEEEEECCCCCEEEEecCC---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKD---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+.+ .++=|+|+|++++|.++-.+ |.|-.|.++...-.+. .
T Consensus 38 ~~~-nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt------------------------------------~ 80 (346)
T COG2706 38 ELG-NPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLT------------------------------------F 80 (346)
T ss_pred ccC-CCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEE------------------------------------E
Confidence 344 45788999999988887654 6777777763100000 0
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-CCcceEEEeeccCCc----------eeEEEeccCCCCeE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHDAD----------LHCVDWNPLDDNLI 152 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~l 152 (309)
+........+-+-+++++++..++.+-..-|.|.++-++. +..........|.+. +....+.| +++++
T Consensus 81 ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP-~~~~l 159 (346)
T COG2706 81 LNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTP-DGRYL 159 (346)
T ss_pred eeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCC-CCCEE
Confidence 1111111223378899999944444555678999999866 332122223334444 88899999 89888
Q ss_pred EEEcC-CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 153 LTGSA-DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 153 ~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
++... -..|.+|++....... .....+ ......+.|.|+|++++.++..--+++|.+|..................
T Consensus 160 ~v~DLG~Dri~~y~~~dg~L~~--~~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tl 236 (346)
T COG2706 160 VVPDLGTDRIFLYDLDDGKLTP--ADPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTL 236 (346)
T ss_pred EEeecCCceEEEEEcccCcccc--cccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccC
Confidence 88765 3479999998632111 011122 2345678999999999888888889999999998853322221111101
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|. .+. -..+..+|..+|+|++|.++-=. ...|-+|.+..
T Consensus 237 P~----dF~-g~~~~aaIhis~dGrFLYasNRg-------~dsI~~f~V~~ 275 (346)
T COG2706 237 PE----DFT-GTNWAAAIHISPDGRFLYASNRG-------HDSIAVFSVDP 275 (346)
T ss_pred cc----ccC-CCCceeEEEECCCCCEEEEecCC-------CCeEEEEEEcC
Confidence 10 111 23467889999999988875322 24777777764
No 281
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.09 E-value=3.4e-08 Score=88.45 Aligned_cols=189 Identities=15% Similarity=0.266 Sum_probs=107.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCC-------CCCc---ccCCCCC
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPG-------DGND---KAADGPS 80 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~ 80 (309)
.|.+++||||+..|+..+.++++.+-.-. .......... ...... .....+..|.. .+.. ..-+...
T Consensus 122 GI~a~~WSPD~Ella~vT~~~~l~~mt~~-fd~i~E~~l~-~~~~~~-~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~ 198 (928)
T PF04762_consen 122 GILAASWSPDEELLALVTGEGNLLLMTRD-FDPISEVPLD-SDDFGE-SKHVSVGWGKKETQFHGSAGKAAARQLRDPTV 198 (928)
T ss_pred cEEEEEECCCcCEEEEEeCCCEEEEEecc-ceEEEEeecC-ccccCC-CceeeeccCcccCccCcchhhhhhhhccCCCC
Confidence 58999999999999999999999887532 1100000000 000000 00000000100 0000 0000000
Q ss_pred c-CcccccccccCCeEEEEEecCCCcEEEEEcC---C---CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 81 V-GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD---D---SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 81 ~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
. .....+. +...-..++|-.|| .+||+.+- . ..++||+-+ +. .......-.+--.+++|.| +|+++|
T Consensus 199 ~~~d~~~~s-~dd~~~~ISWRGDG-~yFAVss~~~~~~~~R~iRVy~Re-G~--L~stSE~v~gLe~~l~WrP-sG~lIA 272 (928)
T PF04762_consen 199 PKVDEGKLS-WDDGRVRISWRGDG-EYFAVSSVEPETGSRRVIRVYSRE-GE--LQSTSEPVDGLEGALSWRP-SGNLIA 272 (928)
T ss_pred CccccCccc-cCCCceEEEECCCC-cEEEEEEEEcCCCceeEEEEECCC-ce--EEeccccCCCccCCccCCC-CCCEEE
Confidence 0 0011222 34455679999999 78887763 2 579999854 55 3333333334456889999 999999
Q ss_pred EEcC---CCcEEEEecCCCCCCCCCCceeeec----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 154 TGSA---DNSVRMFDRRNLTSNGVGSPINKFE----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 154 ~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+.-. ...|.+|.-. |-.-..|. .....|..++|++|+. +||.-..|. |.+|-..+
T Consensus 273 ~~q~~~~~~~VvFfErN-------GLrhgeF~l~~~~~~~~v~~l~Wn~ds~-iLAv~~~~~-vqLWt~~N 334 (928)
T PF04762_consen 273 SSQRLPDRHDVVFFERN-------GLRHGEFTLRFDPEEEKVIELAWNSDSE-ILAVWLEDR-VQLWTRSN 334 (928)
T ss_pred EEEEcCCCcEEEEEecC-------CcEeeeEecCCCCCCceeeEEEECCCCC-EEEEEecCC-ceEEEeeC
Confidence 8765 3456677644 33333332 3456799999999999 566766554 99999887
No 282
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.08 E-value=2.9e-07 Score=70.73 Aligned_cols=216 Identities=14% Similarity=0.163 Sum_probs=132.8
Q ss_pred EEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 14 ALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 14 ~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
++.|.+ ++.++++--..+.|..|+..++.... +. ..
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-----------------------------------------~~-~~- 40 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-----------------------------------------ID-LP- 40 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-----------------------------------------EE-SS-
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-----------------------------------------Ee-cC-
Confidence 578888 77788888889999999987542211 11 11
Q ss_pred CeEEEEEe-cCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee--c-cCCceeEEEeccCCCCeEEEEcCC--------Cc
Q 021657 93 TVEDVTFC-PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK--A-HDADLHCVDWNPLDDNLILTGSAD--------NS 160 (309)
Q Consensus 93 ~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~l~~~~~d--------g~ 160 (309)
....+.+. +++ . |+.+...+ +.++|..+++........ . .....+.+++.| ++++.++.... |.
T Consensus 41 ~~~G~~~~~~~g-~-l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~ 116 (246)
T PF08450_consen 41 GPNGMAFDRPDG-R-LYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDPGS 116 (246)
T ss_dssp SEEEEEEECTTS-E-EEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGSEE
T ss_pred CCceEEEEccCC-E-EEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcC-CCCEEEEecCCCccccccccc
Confidence 26777887 554 5 44445544 556698887633333332 1 335678999999 88877776544 44
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|..++... + +..+...-...+.|+|+|+++.|+++-+..+.|..|++...+.... ....+..+.
T Consensus 117 v~~~~~~~-------~-~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~--------~~~~~~~~~ 180 (246)
T PF08450_consen 117 VYRIDPDG-------K-VTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELS--------NRRVFIDFP 180 (246)
T ss_dssp EEEEETTS-------E-EEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEE--------EEEEEEE-S
T ss_pred eEEECCCC-------e-EEEEecCcccccceEECCcchheeecccccceeEEEecccccccee--------eeeeEEEcC
Confidence 66666542 2 2223223456789999999998888888899999999975332111 011222333
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
......-.+++..++..+++..+. +.|.+++.. ++.+..+.-....+++++|
T Consensus 181 ~~~g~pDG~~vD~~G~l~va~~~~--------~~I~~~~p~-------G~~~~~i~~p~~~~t~~~f 232 (246)
T PF08450_consen 181 GGPGYPDGLAVDSDGNLWVADWGG--------GRIVVFDPD-------GKLLREIELPVPRPTNCAF 232 (246)
T ss_dssp SSSCEEEEEEEBTTS-EEEEEETT--------TEEEEEETT-------SCEEEEEE-SSSSEEEEEE
T ss_pred CCCcCCCcceEcCCCCEEEEEcCC--------CEEEEECCC-------ccEEEEEcCCCCCEEEEEE
Confidence 333457889999988654433322 789999876 5555555544347778877
No 283
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=1.9e-10 Score=97.33 Aligned_cols=201 Identities=15% Similarity=0.226 Sum_probs=140.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
++++.|+. .-+|++|+.+.+.|+.|+..|.|+++++.++
T Consensus 1095 ~~frd~~~-~fTc~afs~~~~hL~vG~~~Geik~~nv~sG---------------------------------------- 1133 (1516)
T KOG1832|consen 1095 RSFRDETA-LFTCIAFSGGTNHLAVGSHAGEIKIFNVSSG---------------------------------------- 1133 (1516)
T ss_pred hhhhcccc-ceeeEEeecCCceEEeeeccceEEEEEccCc----------------------------------------
Confidence 56788887 6799999999999999999999999999854
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCC-eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS-CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
.......+|+.+|+-+.-+.+|...|.+++... -..+|++.+-- ...+.+. .-.++.|+. ....-+.|.....
T Consensus 1134 ~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~-~~~Hsf~----ed~~vkFsn-~~q~r~~gt~~d~ 1207 (1516)
T KOG1832|consen 1134 SMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTG-GPRHSFD----EDKAVKFSN-SLQFRALGTEADD 1207 (1516)
T ss_pred cccccccccccccccccccCCcceeeeeccccCchHHHhcccccc-Ccccccc----ccceeehhh-hHHHHHhcccccc
Confidence 334456779999999999989855555554444 46799986522 2344442 346788887 5666666777778
Q ss_pred EEEEecCCCCCCCCCCceeeec----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 161 VRMFDRRNLTSNGVGSPINKFE----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
..+||+.+ ..++.++- +....-+...|+|+...+| .||. +||++.. +.+
T Consensus 1208 a~~YDvqT------~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl----ndGv--LWDvR~~---------------~aI 1260 (1516)
T KOG1832|consen 1208 ALLYDVQT------CSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL----NDGV--LWDVRIP---------------EAI 1260 (1516)
T ss_pred eEEEeccc------CcHHHHhcCcchhhhhhccccccCCCcceEe----eCce--eeeeccH---------------HHH
Confidence 99999999 66666632 1122336788999998444 3664 8999983 223
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
..+...+. -..-.|+|+|..+++ .-.|||++ +.+.+..+.
T Consensus 1261 h~FD~ft~-~~~G~FHP~g~eVII-------------NSEIwD~R------TF~lLh~VP 1300 (1516)
T KOG1832|consen 1261 HRFDQFTD-YGGGGFHPSGNEVII-------------NSEIWDMR------TFKLLHSVP 1300 (1516)
T ss_pred hhhhhhee-cccccccCCCceEEe-------------echhhhhH------HHHHHhcCc
Confidence 33332221 123458999988774 55699999 666666554
No 284
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=9.5e-09 Score=80.62 Aligned_cols=229 Identities=11% Similarity=0.056 Sum_probs=148.3
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
|.+ .|+-+.- .-.+++++++.||.++.|.-..- .-.+.+..
T Consensus 8 hrd-~i~hv~~-tka~fiiqASlDGh~KFWkKs~i-------------------------------------sGvEfVKh 48 (558)
T KOG0882|consen 8 HRD-VITHVFP-TKAKFIIQASLDGHKKFWKKSRI-------------------------------------SGVEFVKH 48 (558)
T ss_pred ccc-eeeeEee-ehhheEEeeecchhhhhcCCCCc-------------------------------------cceeehhh
Confidence 666 6655543 35679999999999999986520 11233556
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcC-CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC-CeEE-EEcCCCcEEE
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-NLIL-TGSADNSVRM 163 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~-~~~~dg~i~i 163 (309)
+..|-..|.+++.+-++ .++.|.+. |..++++|+..-.......+..-.+.+.. -.+|.+. ..++ +...++.|.+
T Consensus 49 FraHL~~I~sl~~S~dg-~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~w-v~skGd~~s~IAVs~~~sg~i~V 126 (558)
T KOG0882|consen 49 FRAHLGVILSLAVSYDG-WLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEW-VTSKGDKISLIAVSLFKSGKIFV 126 (558)
T ss_pred hHHHHHHHHhhhccccc-eeEeeccCcccceeEEEeeccchhhhcccccCCCceEE-ecCCCCeeeeEEeecccCCCcEE
Confidence 77889999999999988 88888777 99999999987653212222222222211 1233011 1333 3345789999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc-ccccccCCCCCcCCCCceeeeecCC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK-VGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+|-+... .+....-.-|..+|..+.+.+.+.. +++....|.|.-|.... ...+...... ......-++.+.-.
T Consensus 127 vD~~~d~----~q~~~fkklH~sPV~~i~y~qa~Ds-~vSiD~~gmVEyWs~e~~~qfPr~~l~~-~~K~eTdLy~f~K~ 200 (558)
T KOG0882|consen 127 VDGFGDF----CQDGYFKKLHFSPVKKIRYNQAGDS-AVSIDISGMVEYWSAEGPFQFPRTNLNF-ELKHETDLYGFPKA 200 (558)
T ss_pred ECCcCCc----CccceecccccCceEEEEeeccccc-eeeccccceeEeecCCCcccCccccccc-cccccchhhccccc
Confidence 9988632 2344445568899999999999996 55888889999999873 1111110000 00111223344445
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
.....++.|+|++..+. +-+.|..|+++++. +++.++++.
T Consensus 201 Kt~pts~Efsp~g~qis--------tl~~DrkVR~F~~K------tGklvqeiD 240 (558)
T KOG0882|consen 201 KTEPTSFEFSPDGAQIS--------TLNPDRKVRGFVFK------TGKLVQEID 240 (558)
T ss_pred ccCccceEEccccCccc--------ccCcccEEEEEEec------cchhhhhhh
Confidence 56778999999988755 44455999999999 677666654
No 285
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=1.8e-08 Score=78.02 Aligned_cols=158 Identities=9% Similarity=0.114 Sum_probs=101.5
Q ss_pred cccCCCCCcceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+.|.+|.. .|..++|+|..+ ++..++.+.+|+|.|+++...
T Consensus 187 q~lp~~g~-~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~------------------------------------- 228 (463)
T KOG1645|consen 187 QILPGEGS-FIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCV------------------------------------- 228 (463)
T ss_pred hcccccch-hhhhhccCccccceeeeeccCceEEEEeccccee-------------------------------------
Confidence 34667777 899999999776 788999999999999985322
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEeccC-----CCCeEEE
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPL-----DDNLILT 154 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~-----~~~~l~~ 154 (309)
+..+..+ ..+++++|.-+..+++..|..+|.|.+||++..+.+...... -...+|..++.-+. .+.+++.
T Consensus 229 ---vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~ 304 (463)
T KOG1645|consen 229 ---VSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVF 304 (463)
T ss_pred ---eeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEe
Confidence 2333445 689999999988899999999999999999977643222111 12334544443220 2344444
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 206 (309)
...+ +.+|++..... ...++..+. ..+...+++..+-.++++++.-.
T Consensus 305 ~lt~--l~f~ei~~s~~--~~p~vlele-~pG~cismqy~~~snh~l~tyRs 351 (463)
T KOG1645|consen 305 ALTV--LQFYEIVFSAE--CLPCVLELE-PPGICISMQYHGVSNHLLLTYRS 351 (463)
T ss_pred eehh--hhhhhhhcccc--CCCcccccC-CCcceeeeeecCccceEEEEecC
Confidence 4332 45666554221 022222332 34566677777766777766654
No 286
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.01 E-value=1.7e-08 Score=83.85 Aligned_cols=123 Identities=16% Similarity=0.242 Sum_probs=91.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
|+|.||.+ .|..+.|+.+.+.|-|...+|.|.||-+-++.-...
T Consensus 65 QtLeGH~~-sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EE----------------------------------- 108 (1189)
T KOG2041|consen 65 QTLEGHNA-SVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEE----------------------------------- 108 (1189)
T ss_pred hhhccCcc-eEEEEEeccccccccccCCCceEEEEeeecccHHHH-----------------------------------
Confidence 68999999 899999999999999999999999999875421111
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
..-....+.|.+++|+.+| ..++....||.|.+=.+...+ ..-+.+++ .....+.|++ +...++.+-..|.+
T Consensus 109 ---MiNnRnKSvV~SmsWn~dG-~kIcIvYeDGavIVGsvdGNR-IwgKeLkg--~~l~hv~ws~-D~~~~Lf~~ange~ 180 (1189)
T KOG2041|consen 109 ---MINNRNKSVVVSMSWNLDG-TKICIVYEDGAVIVGSVDGNR-IWGKELKG--QLLAHVLWSE-DLEQALFKKANGET 180 (1189)
T ss_pred ---HhhCcCccEEEEEEEcCCC-cEEEEEEccCCEEEEeeccce-ecchhcch--heccceeecc-cHHHHHhhhcCCcE
Confidence 1112345679999999999 779999999999887775443 11112222 2344778999 78888888888999
Q ss_pred EEEecCC
Q 021657 162 RMFDRRN 168 (309)
Q Consensus 162 ~i~d~~~ 168 (309)
.+||...
T Consensus 181 hlydnqg 187 (1189)
T KOG2041|consen 181 HLYDNQG 187 (1189)
T ss_pred EEecccc
Confidence 9998653
No 287
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.00 E-value=1.5e-07 Score=86.03 Aligned_cols=171 Identities=13% Similarity=0.197 Sum_probs=110.2
Q ss_pred EEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 13 FALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 13 ~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
+.++|+| ++.++++.+.++.|++||..++...... +. +.....+.... ....-
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~---------G~------------G~~~~~~g~~~-----~~~~~ 739 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFS---------GD------------GYERNLNGSSG-----TSTSF 739 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEe---------cC------------CccccCCCCcc-----ccccc
Confidence 5799999 5667778888999999998764221100 00 00000000000 00111
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEE-----------Eeec--------cCCceeEEEeccCCCCeE
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK-----------VEKA--------HDADLHCVDWNPLDDNLI 152 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----------~~~~--------~~~~v~~~~~~~~~~~~l 152 (309)
.....|+++|++..++++-+.++.|++||+.++...... .+.. .-.....+++++ +++++
T Consensus 740 ~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~-dG~LY 818 (1057)
T PLN02919 740 AQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAK-DGQIY 818 (1057)
T ss_pred cCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeC-CCcEE
Confidence 345789999998567778888899999999876521110 0000 011246889999 88999
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCceeeecc--------------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPINKFEG--------------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
++-..++.|++||..+ +... .+.+ .-.....|+++++|+ ++++-+.++.|++||+++.
T Consensus 819 VADs~N~rIrviD~~t------g~v~-tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~-lyVaDt~Nn~Irvid~~~~ 890 (1057)
T PLN02919 819 VADSYNHKIKKLDPAT------KRVT-TLAGTGKAGFKDGKALKAQLSEPAGLALGENGR-LFVADTNNSLIRYLDLNKG 890 (1057)
T ss_pred EEECCCCEEEEEECCC------CeEE-EEeccCCcCCCCCcccccccCCceEEEEeCCCC-EEEEECCCCEEEEEECCCC
Confidence 9988999999999876 3322 2211 112467899999998 6778889999999999773
No 288
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.00 E-value=1.7e-09 Score=89.77 Aligned_cols=164 Identities=22% Similarity=0.377 Sum_probs=123.2
Q ss_pred CeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCc-ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 93 TVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTS-PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 93 ~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
.|-.+.|+|. .+..+++.+. ..-.+|++..... .+...+.+|...|+.+-|+|+....+++++.|-.+..||++.+
T Consensus 69 ~vad~qws~h~a~~~wiVsts~-qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp 147 (1081)
T KOG0309|consen 69 QVADVQWSPHPAKPYWIVSTSN-QKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP 147 (1081)
T ss_pred hhcceecccCCCCceeEEecCc-chhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCC
Confidence 4667778764 2344555544 4456898864432 2555677899999999999988999999999999999999986
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
..++..+..-...-..++|+.....++ +.+..+.|.+||++..+ .++..+++|...|+.+
T Consensus 148 -----~~p~ys~~~w~s~asqVkwnyk~p~vl-asshg~~i~vwd~r~gs--------------~pl~s~K~~vs~vn~~ 207 (1081)
T KOG0309|consen 148 -----HRPFYSTSSWRSAASQVKWNYKDPNVL-ASSHGNDIFVWDLRKGS--------------TPLCSLKGHVSSVNSI 207 (1081)
T ss_pred -----CcceeeeecccccCceeeecccCcchh-hhccCCceEEEeccCCC--------------cceEEecccceeeehH
Confidence 567776666566678899998877766 55567789999999843 3456778899999999
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
+|..-....+. +.+.|++|++||.....
T Consensus 208 ~fnr~~~s~~~-------s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 208 DFNRFKYSEIM-------SSSNDGTVKFWDYSKST 235 (1081)
T ss_pred HHhhhhhhhhc-------ccCCCCceeeecccccc
Confidence 99875444455 55555999999998543
No 289
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.99 E-value=2.7e-07 Score=73.29 Aligned_cols=117 Identities=14% Similarity=0.199 Sum_probs=95.3
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCC-eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDS-CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
+|.+.|.-..+..++ .-++.|..|| .+-|+|.++++ .+.+...-+.|.++..+| +|++++++.....|.++|+.
T Consensus 357 ~~~~~VrY~r~~~~~-e~~vigt~dgD~l~iyd~~~~e---~kr~e~~lg~I~av~vs~-dGK~~vvaNdr~el~vidid 431 (668)
T COG4946 357 GKKGGVRYRRIQVDP-EGDVIGTNDGDKLGIYDKDGGE---VKRIEKDLGNIEAVKVSP-DGKKVVVANDRFELWVIDID 431 (668)
T ss_pred CCCCceEEEEEccCC-cceEEeccCCceEEEEecCCce---EEEeeCCccceEEEEEcC-CCcEEEEEcCceEEEEEEec
Confidence 466678877777776 4688899999 89999998887 555566778899999999 99999999999999999999
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC----CcEEEEeCCc
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED----GLLNIWDYEK 217 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d----g~i~iwd~~~ 217 (309)
+ +.....-+...+-|+.+.|+|++++ +|-+--+ ..|++||+..
T Consensus 432 n------gnv~~idkS~~~lItdf~~~~nsr~-iAYafP~gy~tq~Iklydm~~ 478 (668)
T COG4946 432 N------GNVRLIDKSEYGLITDFDWHPNSRW-IAYAFPEGYYTQSIKLYDMDG 478 (668)
T ss_pred C------CCeeEecccccceeEEEEEcCCcee-EEEecCcceeeeeEEEEecCC
Confidence 8 6655555556778999999999997 5555444 4689999987
No 290
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.99 E-value=6e-08 Score=71.27 Aligned_cols=176 Identities=13% Similarity=0.100 Sum_probs=108.4
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH 184 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 184 (309)
.+|+.|+..|...+|...+.+. .......|...|+-+.=.-+...-+..++.|.++++.++.- +.........
T Consensus 85 ~~la~gG~~g~fd~~~~~tn~~-h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~------~s~~~~~h~~ 157 (344)
T KOG4532|consen 85 VTLADGGASGQFDLFACNTNDG-HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSG------DSNKFAVHNQ 157 (344)
T ss_pred cEEEeccccceeeeecccCccc-ceeeecccccchhhhhhhcccccceeeccCCcceeEEEEec------Ccccceeecc
Confidence 4689999999999999986652 23333334443322211000233456677888888888775 2222222111
Q ss_pred CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecC
Q 021657 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 185 ~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 264 (309)
.-.++++++++|+++ +++.++...|-.|.+...++.... ......++.--+..|+..+. .+|+++.
T Consensus 158 ~~~~ns~~~snd~~~-~~~Vgds~~Vf~y~id~~sey~~~------------~~~a~t~D~gF~~S~s~~~~-~FAv~~Q 223 (344)
T KOG4532|consen 158 NLTQNSLHYSNDPSW-GSSVGDSRRVFRYAIDDESEYIEN------------IYEAPTSDHGFYNSFSENDL-QFAVVFQ 223 (344)
T ss_pred ccceeeeEEcCCCce-EEEecCCCcceEEEeCCccceeee------------eEecccCCCceeeeeccCcc-eEEEEec
Confidence 234889999999996 567788889999999885443221 11222333446678888554 5665555
Q ss_pred CCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 265 DCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 265 d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
| |++.|||++.+.. +....-.+-..|.+.+..|.|+|
T Consensus 224 d-------g~~~I~DVR~~~t-pm~~~sstrp~hnGa~R~c~Fsl 260 (344)
T KOG4532|consen 224 D-------GTCAIYDVRNMAT-PMAEISSTRPHHNGAFRVCRFSL 260 (344)
T ss_pred C-------CcEEEEEeccccc-chhhhcccCCCCCCceEEEEecC
Confidence 5 9999999996421 11122233346889999999986
No 291
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.97 E-value=1.8e-07 Score=79.42 Aligned_cols=215 Identities=13% Similarity=0.095 Sum_probs=139.0
Q ss_pred EECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeE
Q 021657 16 AMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVE 95 (309)
Q Consensus 16 ~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 95 (309)
+|++.+..++.|+.+|.|.+.+-. .+..+.++.+...|.
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s-----------------------------------------~~~~~~fqa~~~siv 68 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS-----------------------------------------FQLIRGFQAYEQSIV 68 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc-----------------------------------------ceeeehheecchhhh
Confidence 567888899999999999887743 222344555655533
Q ss_pred EEEEecCCCcEEEEEcCCC-----eEEEEEcCCCCc---ceEE---Eeec-----cCCceeEEEeccCCCCeEEEEcCCC
Q 021657 96 DVTFCPSSAQEFCSVGDDS-----CLILWDARVGTS---PVIK---VEKA-----HDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 96 ~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~---~~~~---~~~~-----~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
..-+.-++..+|++-+.|+ .|+||+++..+. |... .... ...++.+++.+. +-..+|+|..+|
T Consensus 69 ~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~-~l~~Iv~Gf~nG 147 (933)
T KOG2114|consen 69 QFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSE-DLKTIVCGFTNG 147 (933)
T ss_pred hHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEc-cccEEEEEecCc
Confidence 3333344436777777664 589999975421 1111 2222 356788999998 889999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|..+.-.-.... +....-....+.+|+.+++..++.-++.+++ -..|.+|.+.... .....+
T Consensus 148 ~V~~~~GDi~RDr--gsr~~~~~~~~~pITgL~~~~d~~s~lFv~T-t~~V~~y~l~gr~--------------p~~~~l 210 (933)
T KOG2114|consen 148 LVICYKGDILRDR--GSRQDYSHRGKEPITGLALRSDGKSVLFVAT-TEQVMLYSLSGRT--------------PSLKVL 210 (933)
T ss_pred EEEEEcCcchhcc--ccceeeeccCCCCceeeEEecCCceeEEEEe-cceeEEEEecCCC--------------cceeee
Confidence 9998853321111 2222223345679999999999986332333 3579999998521 123446
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh-cccceEEE
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE-KFKAHVIS 304 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-~h~~~v~~ 304 (309)
..|...+.+..+++..+.++++++ ..|.+|+.. ...+-.++. +|+..+..
T Consensus 211 d~~G~~lnCss~~~~t~qfIca~~---------e~l~fY~sd------~~~~cfaf~~g~kk~~~~ 261 (933)
T KOG2114|consen 211 DNNGISLNCSSFSDGTYQFICAGS---------EFLYFYDSD------GRGPCFAFEVGEKKEMLV 261 (933)
T ss_pred ccCCccceeeecCCCCccEEEecC---------ceEEEEcCC------CcceeeeecCCCeEEEEE
Confidence 778889999999986665666555 489999998 344445555 66554433
No 292
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.97 E-value=1.6e-09 Score=87.30 Aligned_cols=171 Identities=15% Similarity=0.238 Sum_probs=117.8
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC-----CcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-----TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
+..+.+|+..|..+.--.+. +-|++++.|.+|++|.++.. ...+..+...|+.+|..+.|-. +.+++++ .|
T Consensus 728 L~nf~GH~~~iRai~AidNE-NSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~-~lr~i~S--cD 803 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNE-NSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLA-DLRSIAS--CD 803 (1034)
T ss_pred eecccCcHHHhHHHHhcccc-cceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeee-ccceeee--cc
Confidence 35577899988888755544 67999999999999998642 1225667789999999999988 6667665 58
Q ss_pred CcEEEEecCCCCCCCCCCceeeecc--CCCCeeEEEEec--CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEG--HSAAVLCVQWSP--DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
|.|++||.-- ++++..+.. ..+.+..+..-+ +...++|.++...+|+++|.+..+..-+ -
T Consensus 804 ~giHlWDPFi------gr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E----------~ 867 (1034)
T KOG4190|consen 804 GGIHLWDPFI------GRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCE----------L 867 (1034)
T ss_pred Ccceeecccc------cchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceee----------E
Confidence 8999999876 666654421 223333344333 3444455557889999999987322110 1
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+....+.+.-+.+++..|.|+++.+.-| .|+|.+.|.++
T Consensus 868 kVcna~~Pna~~R~iaVa~~GN~lAa~LS--------nGci~~LDaR~ 907 (1034)
T KOG4190|consen 868 KVCNAPGPNALTRAIAVADKGNKLAAALS--------NGCIAILDARN 907 (1034)
T ss_pred EeccCCCCchheeEEEeccCcchhhHHhc--------CCcEEEEecCC
Confidence 12223445567889999999998874444 48899999884
No 293
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.97 E-value=1.6e-09 Score=56.93 Aligned_cols=38 Identities=18% Similarity=0.506 Sum_probs=35.0
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 120 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd 120 (309)
+++..+.+|.+.|++|+|+|++ .+|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~-~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDG-NFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTS-SEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEeccc-ccceeeCCCCEEEEEC
Confidence 3567889999999999999997 8999999999999997
No 294
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.96 E-value=2.8e-08 Score=74.54 Aligned_cols=205 Identities=17% Similarity=0.229 Sum_probs=117.5
Q ss_pred ceEEEEECCCCC--EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC------CCcC
Q 021657 11 AEFALAMCPTEP--YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG------PSVG 82 (309)
Q Consensus 11 ~V~~~~~~~~~~--~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 82 (309)
.|..+.|-.++. .++..+.|++|++|.+.......................... .-..+.+-.. ....
T Consensus 87 Kin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~----s~~~l~lprls~hd~iiaa~ 162 (460)
T COG5170 87 KINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLT----STKELLLPRLSEHDEIIAAK 162 (460)
T ss_pred HhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcC----CHHHhhcccccccceEEEec
Confidence 367788876543 477778899999999876521111111000000000000000 0000000000 0111
Q ss_pred ccccc-ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-eEEEeeccC-----CceeEEEeccCCCCeEEEE
Q 021657 83 PRGIY-NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-VIKVEKAHD-----ADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 83 ~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~ 155 (309)
+.+.. ..|.-.|+++.|+.+. ..+++ ..|-.|.+|++...... .+...+.|. .-|++..|+|...+.+.-.
T Consensus 163 p~rvyaNaH~yhiNSiS~NsD~-et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYS 240 (460)
T COG5170 163 PCRVYANAHPYHINSISFNSDK-ETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYS 240 (460)
T ss_pred cceeccccceeEeeeeeecCch-heeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEe
Confidence 22222 5688889999999886 55555 46788999998754421 122233333 4588999999777888888
Q ss_pred cCCCcEEEEecCCCCCCCCCCceee----------eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINK----------FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
+..|.|++-|+|+.........+.. +..-...|..+.|+++|++++ +- .--+++|||++..+.+..
T Consensus 241 sSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIl-sR-dyltvkiwDvnm~k~pik 316 (460)
T COG5170 241 SSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYIL-SR-DYLTVKIWDVNMAKNPIK 316 (460)
T ss_pred cCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEE-Ee-ccceEEEEecccccCCce
Confidence 8999999999995321100111111 112235678899999999743 44 357899999998655543
No 295
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.93 E-value=8.5e-10 Score=90.11 Aligned_cols=207 Identities=17% Similarity=0.268 Sum_probs=136.9
Q ss_pred eEEEEECCC--CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 12 EFALAMCPT--EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 12 V~~~~~~~~--~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
+.|+++.-+ ...++.|..+|.|-+-.++..... ......+
T Consensus 59 ~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS--------------------------------------s~E~tp~ 100 (783)
T KOG1008|consen 59 VKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS--------------------------------------SAEVTPG 100 (783)
T ss_pred ceeehhhcCCchhhhhhccccCceEEeecCCcccc--------------------------------------cceeccc
Confidence 567766543 356788888999988877643111 1123456
Q ss_pred ccCCeEEEEEecCCCcEEEEEc----CCCeEEEEEcCCCCcceEE--Eee-ccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVG----DDSCLILWDARVGTSPVIK--VEK-AHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
+..+.++++|++-+...||+|- .|..+.|||+.+.-..+.. .+. +......+++|.. +.+++.+|.....+.
T Consensus 101 ~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlr-d~klvlaGm~sr~~~ 179 (783)
T KOG1008|consen 101 YARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLR-DTKLVLAGMTSRSVH 179 (783)
T ss_pred ccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCcccccccc-Ccchhhcccccchhh
Confidence 7889999999998767777764 4678999999876211111 111 2334566899997 889999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEec-CCCcEEEEecCCCcEEEEe-CCcccccccCCCCCcCCCCceeeeec
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-DKSSVFGSSAEDGLLNIWD-YEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~dg~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
++|+|.. ......+ ....+..+.+.| .+.+ + +...||.|.+|| .++...++....+ .-.
T Consensus 180 ifdlRqs-----~~~~~sv--nTk~vqG~tVdp~~~nY-~-cs~~dg~iAiwD~~rnienpl~~i~~----------~~N 240 (783)
T KOG1008|consen 180 IFDLRQS-----LDSVSSV--NTKYVQGITVDPFSPNY-F-CSNSDGDIAIWDTYRNIENPLQIILR----------NEN 240 (783)
T ss_pred hhhhhhh-----hhhhhhh--hhhhcccceecCCCCCc-e-eccccCceeeccchhhhccHHHHHhh----------CCC
Confidence 9999952 1222222 234566778888 5554 5 455599999999 5543333221100 111
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.....+..++|+|..+-++++.++|. ++|+++++..
T Consensus 241 ~~~~~l~~~aycPtrtglla~l~RdS------~tIrlydi~~ 276 (783)
T KOG1008|consen 241 KKPKQLFALAYCPTRTGLLAVLSRDS------ITIRLYDICV 276 (783)
T ss_pred CcccceeeEEeccCCcchhhhhccCc------ceEEEecccc
Confidence 11225899999999988999888884 7899999874
No 296
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.92 E-value=3.3e-07 Score=77.08 Aligned_cols=215 Identities=16% Similarity=0.163 Sum_probs=142.4
Q ss_pred CcccCCCCCcceEEEEECCCC------------CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTE------------PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKP 68 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~------------~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (309)
|+.+.-|.. .|+.+.|.|-. -+||++...|.|.+||....
T Consensus 48 iqsie~h~s-~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~--------------------------- 99 (1062)
T KOG1912|consen 48 IQSIELHQS-AVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLA--------------------------- 99 (1062)
T ss_pred hhccccCcc-ceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhh---------------------------
Confidence 466778887 89999998732 25788888999999998743
Q ss_pred CCCCcccCCCCCcCcccccccccCCeEEEEEecC---CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEec
Q 021657 69 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPS---SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (309)
..+..+..|..++.+++|-+. ....|++-....+|.+|+..+|+ ..-..........|+.++
T Consensus 100 -------------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~--k~Wk~~ys~~iLs~f~~D 164 (1062)
T KOG1912|consen 100 -------------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGE--KFWKYDYSHEILSCFRVD 164 (1062)
T ss_pred -------------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCc--eeeccccCCcceeeeeeC
Confidence 223345668888999999764 23567777777899999999998 444444556677889999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCC-CCCceeeeccCCC-------------------------CeeEEEEecCCCc
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNG-VGSPINKFEGHSA-------------------------AVLCVQWSPDKSS 199 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~ 199 (309)
|.+.+.+..-+..|.+.+.+.-....+. .++..+.-..|.. ....++|+|.-++
T Consensus 165 Pfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn 244 (1062)
T KOG1912|consen 165 PFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRN 244 (1062)
T ss_pred CCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhc
Confidence 9998888888888988887754322211 1222211111111 0124577887766
Q ss_pred EEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCC--CeEEEEecCCCCCCCCCCeEEE
Q 021657 200 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASD--PWTVVSVSDDCDSTGGGGTLQI 277 (309)
Q Consensus 200 l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~s~s~d~~s~~~dg~v~v 277 (309)
++ -......+.++|++- ..++....-..+.+.-+.|-|+. ..|+ ..-.||.+.+
T Consensus 245 ~l-fi~~prellv~dle~---------------~~~l~vvpier~~akfv~vlP~~~rd~Lf--------clH~nG~lti 300 (1062)
T KOG1912|consen 245 IL-FITFPRELLVFDLEY---------------ECCLAVVPIERGGAKFVDVLPDPRRDALF--------CLHSNGRLTI 300 (1062)
T ss_pred eE-EEEeccceEEEcchh---------------hceeEEEEeccCCcceeEeccCCCcceEE--------EEecCCeEEE
Confidence 54 334477899999986 33444444444555556666654 4455 3334599999
Q ss_pred EEccc
Q 021657 278 WRMSD 282 (309)
Q Consensus 278 w~~~~ 282 (309)
|-.+.
T Consensus 301 rvrk~ 305 (1062)
T KOG1912|consen 301 RVRKE 305 (1062)
T ss_pred EEeec
Confidence 99875
No 297
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.91 E-value=3.2e-07 Score=77.35 Aligned_cols=114 Identities=17% Similarity=0.301 Sum_probs=80.0
Q ss_pred ccCCeEEEEEecC----CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 90 HEDTVEDVTFCPS----SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 90 ~~~~v~~~~~~~~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
...++.+++++|+ ..+.+++|+.-| +.++.-+--............++|.++.| .|+++|=++.+| |++||
T Consensus 111 f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W---~g~lIAWand~G-v~vyd 185 (846)
T KOG2066|consen 111 FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW---RGNLIAWANDDG-VKVYD 185 (846)
T ss_pred cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEe---cCcEEEEecCCC-cEEEe
Confidence 3568999999997 235799999988 88876443222122345567789999999 678998888777 89999
Q ss_pred cCCCCCCCCCCceeeeccCCC------CeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 166 RRNLTSNGVGSPINKFEGHSA------AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
..+ .+.+..++.... ....+.|.++.+ | +.|= .-+|+|..++.
T Consensus 186 ~~~------~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-L-VIGW-~d~v~i~~I~~ 234 (846)
T KOG2066|consen 186 TPT------RQRLTNIPPPSQSVRPELFPPHLHWQDEDR-L-VIGW-GDSVKICSIKK 234 (846)
T ss_pred ccc------cceeeccCCCCCCCCcccCCCceEecCCCe-E-EEec-CCeEEEEEEec
Confidence 988 555555543322 234688888876 3 3453 45799999883
No 298
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.90 E-value=1.8e-07 Score=78.59 Aligned_cols=155 Identities=17% Similarity=0.237 Sum_probs=117.2
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
.++.|+|.| ++|-|+. ..|.|-|.. +.+.++.+..|+.
T Consensus 19 ~A~Dw~~~G-LiAygsh-slV~VVDs~----------------------------------------s~q~iqsie~h~s 56 (1062)
T KOG1912|consen 19 NAADWSPSG-LIAYGSH-SLVSVVDSR----------------------------------------SLQLIQSIELHQS 56 (1062)
T ss_pred cccccCccc-eEEEecC-ceEEEEehh----------------------------------------hhhhhhccccCcc
Confidence 467888877 5666654 466666764 4566777888999
Q ss_pred CeEEEEEecCC-----------CcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC--CC-CeEEEEcCC
Q 021657 93 TVEDVTFCPSS-----------AQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL--DD-NLILTGSAD 158 (309)
Q Consensus 93 ~v~~~~~~~~~-----------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~-~~l~~~~~d 158 (309)
.|+.+.|.|.. .-++|++...|.|.+||...+. .+..+..|.+++..++|-+. +. ..|++-...
T Consensus 57 ~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s--~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~s 134 (1062)
T KOG1912|consen 57 AVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLAS--VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGS 134 (1062)
T ss_pred ceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhh--hhhhhcCCCcchhheeeeeccCcchheeEEecCC
Confidence 99999998732 2357888889999999998887 67778888999999999652 22 577777888
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.++.+|+..+ |+.............++.+.|-...-+..-+..|.+.+-+.-.
T Consensus 135 s~lvLwntdt------G~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~ 187 (1062)
T KOG1912|consen 135 STLVLWNTDT------GEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLG 187 (1062)
T ss_pred cEEEEEEccC------CceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccC
Confidence 8999999999 8888888877777888999985433344555577777766543
No 299
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.89 E-value=8.8e-08 Score=81.77 Aligned_cols=155 Identities=13% Similarity=0.192 Sum_probs=113.8
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC---------CCcEEE
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA---------DNSVRM 163 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---------dg~i~i 163 (309)
.|.-|+. ++ +.+.+|...|+|.+-|.++.+ .++.+.+|.+.|..+.. .|+.|++++. |..|.|
T Consensus 179 ~v~imR~--Nn-r~lf~G~t~G~V~LrD~~s~~--~iht~~aHs~siSDfDv---~GNlLitCG~S~R~~~l~~D~FvkV 250 (1118)
T KOG1275|consen 179 GVTIMRY--NN-RNLFCGDTRGTVFLRDPNSFE--TIHTFDAHSGSISDFDV---QGNLLITCGYSMRRYNLAMDPFVKV 250 (1118)
T ss_pred ceEEEEe--cC-cEEEeecccceEEeecCCcCc--eeeeeeccccceeeeec---cCCeEEEeecccccccccccchhhh
Confidence 4555554 33 789999999999999999888 89999999999998877 6788888864 445899
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
||+|+ .+.+.-+.-+.++ .-+.|.|.-...+++++..|...+-|......+ ..-+.-.....
T Consensus 251 YDLRm------mral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP-----------~~~~~~v~p~~ 312 (1118)
T KOG1275|consen 251 YDLRM------MRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNP-----------PAGVKMVNPNG 312 (1118)
T ss_pred hhhhh------hhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCC-----------ccceeEEccCC
Confidence 99999 5555555544444 457888876666788888999999995442222 11222233344
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+.++.++++++.++ -|..+|.|.+|.-.
T Consensus 313 s~i~~fDiSsn~~ala--------fgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 313 SGISAFDISSNGDALA--------FGDHEGHVNLWADR 342 (1118)
T ss_pred CcceeEEecCCCceEE--------EecccCcEeeecCC
Confidence 5699999999988766 45566999999843
No 300
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.89 E-value=1.5e-07 Score=79.29 Aligned_cols=189 Identities=14% Similarity=0.245 Sum_probs=123.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.++|++++ +++|+-|+-+|.|++.+.+.. + .....|
T Consensus 41 ~is~~av~--~~~~~~GtH~g~v~~~~~~~~-----------------------------------------~-~~~~~~ 76 (846)
T KOG2066|consen 41 AISCCAVH--DKFFALGTHRGAVYLTTCQGN-----------------------------------------P-KTNFDH 76 (846)
T ss_pred HHHHHHhh--cceeeeccccceEEEEecCCc-----------------------------------------c-cccccc
Confidence 45666664 678999999999999987632 1 122234
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC----CCCeEEEEcCCCcEEEEec
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL----DDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~dg~i~i~d~ 166 (309)
... ..+| .++++|+.||+|.|-.+-+.+. ... .....++.+++++|+ ..+.+++|+..| +.++.-
T Consensus 77 s~~------~~~G-ey~asCS~DGkv~I~sl~~~~~--~~~-~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er 145 (846)
T KOG2066|consen 77 SSS------ILEG-EYVASCSDDGKVVIGSLFTDDE--ITQ-YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSER 145 (846)
T ss_pred ccc------ccCC-ceEEEecCCCcEEEeeccCCcc--cee-EecCCcceeEEeccchhhhhhhheeecCcce-EEEehh
Confidence 333 4556 8899999999999999888773 222 234678999999993 256899999988 777765
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
+-.+ .+.-..+....++|.++.|..+ ++|=++.+| |++||+.. ++.....+.+...+ .....-
T Consensus 146 ~wlg----nk~~v~l~~~eG~I~~i~W~g~---lIAWand~G-v~vyd~~~-~~~l~~i~~p~~~~--------R~e~fp 208 (846)
T KOG2066|consen 146 NWLG----NKDSVVLSEGEGPIHSIKWRGN---LIAWANDDG-VKVYDTPT-RQRLTNIPPPSQSV--------RPELFP 208 (846)
T ss_pred hhhc----CccceeeecCccceEEEEecCc---EEEEecCCC-cEEEeccc-cceeeccCCCCCCC--------CcccCC
Confidence 5432 1111245666889999999754 677777555 89999987 33333222221100 111223
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+.|.++.. +++ | +.-+|+|..++
T Consensus 209 phl~W~~~~~-LVI-G--------W~d~v~i~~I~ 233 (846)
T KOG2066|consen 209 PHLHWQDEDR-LVI-G--------WGDSVKICSIK 233 (846)
T ss_pred CceEecCCCe-EEE-e--------cCCeEEEEEEe
Confidence 5678887554 332 2 22489999888
No 301
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.88 E-value=9.6e-07 Score=70.74 Aligned_cols=236 Identities=12% Similarity=0.122 Sum_probs=133.4
Q ss_pred ceEEEEECCCCCEEEEecCCCc---------------EEEEeCCccccccccCCccccccCCCCc----eeecCCCCCCC
Q 021657 11 AEFALAMCPTEPYVLSGGKDKS---------------VVLWSIQDHITSSATDPATAKSAGSSGS----IIKQSPKPGDG 71 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~---------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 71 (309)
.|.-+.|+|.++||.|=+.... +.|||+.++.....+.........-... ...........
T Consensus 73 ~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~ 152 (561)
T COG5354 73 DVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGS 152 (561)
T ss_pred CceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccC
Confidence 3789999999999999776554 8999999885555444322220000000 00000011122
Q ss_pred CcccCCC-CC--cCcccccccccCCeEEEEEecCCC-cEEEE-----EcCCCeEEEEEcCCCCcceEEEeeccCCceeEE
Q 021657 72 NDKAADG-PS--VGPRGIYNGHEDTVEDVTFCPSSA-QEFCS-----VGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142 (309)
Q Consensus 72 ~~~~~~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 142 (309)
.+.++++ .. ..+.+.+. ...|....|+|.+. ..|+. .+.++++++|.+........+.+ ....-..+
T Consensus 153 sl~i~e~t~n~~~~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~l--fk~~~~qL 228 (561)
T COG5354 153 SLYIHEITDNIEEHPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNL--FKVSGVQL 228 (561)
T ss_pred eEEEEecCCccccCchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeee--EeecccEE
Confidence 3333332 11 11122222 34578888888742 22332 45678999999876552222222 22333467
Q ss_pred EeccCCCCeEEEEc-----------CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEE-EEecCCCcE
Q 021657 143 DWNPLDDNLILTGS-----------ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF-GSSAEDGLL 210 (309)
Q Consensus 143 ~~~~~~~~~l~~~~-----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~dg~i 210 (309)
.|.+ .+++++.-- ...++++++++. .. +.......++|...+|.|.++.+. ++|-.+..+
T Consensus 229 kW~~-~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e------~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~ 300 (561)
T COG5354 229 KWQV-LGKYLLVLVMTHTKSNKSYFGESNLYLLRITE------RS-IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASV 300 (561)
T ss_pred EEec-CCceEEEEEEEeeecccceeccceEEEEeecc------cc-cceeccccccceeeeecccCCceeEEecccccce
Confidence 8888 676554321 224678888875 22 222325688999999999887633 344678899
Q ss_pred EEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 211 NIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 211 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.++|++.. ..+....+.=+.+.|+|.+.++++++=+ -.-|.+-+||..
T Consensus 301 s~~~lr~N------------------l~~~~Pe~~rNT~~fsp~~r~il~agF~-----nl~gni~i~~~~ 348 (561)
T COG5354 301 SVFDLRGN------------------LRFYFPEQKRNTIFFSPHERYILFAGFD-----NLQGNIEIFDPA 348 (561)
T ss_pred eecccccc------------------eEEecCCcccccccccCcccEEEEecCC-----ccccceEEeccC
Confidence 99999872 1223333444566677777766543322 133566777765
No 302
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.86 E-value=9.3e-07 Score=72.87 Aligned_cols=179 Identities=12% Similarity=0.083 Sum_probs=103.1
Q ss_pred CCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEE-EEcC--CCeEEEEEcCCCCcceEEEeeccCCceeEEEecc
Q 021657 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFC-SVGD--DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 146 (309)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 146 (309)
...+.+.|...........+ . .+....|+|+|...++ +... +..|.++|+.+++. . .+....+......|+|
T Consensus 168 ~~~l~~~d~dg~~~~~~~~~-~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~--~-~lt~~~g~~~~~~~SP 242 (419)
T PRK04043 168 KSNIVLADYTLTYQKVIVKG-G-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK--E-KIASSQGMLVVSDVSK 242 (419)
T ss_pred cceEEEECCCCCceeEEccC-C-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE--E-EEecCCCcEEeeEECC
Confidence 34455545443333222332 3 7788999999954344 3333 46799999988773 2 2223445566788999
Q ss_pred CCCCeEEE-EcCC--CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc--EEEEeCCccccc
Q 021657 147 LDDNLILT-GSAD--NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL--LNIWDYEKVGKK 221 (309)
Q Consensus 147 ~~~~~l~~-~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~--i~iwd~~~~~~~ 221 (309)
+++.++. .+.+ ..|.++|+.. +. ...+..+........|+|||+.++.+....+. |.+.|+.. ++.
T Consensus 243 -DG~~la~~~~~~g~~~Iy~~dl~~------g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~-g~~ 313 (419)
T PRK04043 243 -DGSKLLLTMAPKGQPDIYLYDTNT------KT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS-GSV 313 (419)
T ss_pred -CCCEEEEEEccCCCcEEEEEECCC------Cc-EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCC-CCe
Confidence 8875554 4334 4677888776 43 33444333333456899999987766655554 55556554 111
Q ss_pred ccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCC---CCCeEEEEEcc
Q 021657 222 VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTG---GGGTLQIWRMS 281 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~---~dg~v~vw~~~ 281 (309)
. + + ...+. ....|+|++.+++.+...+ ... ....|.+.|+.
T Consensus 314 ~-----------r-l-t~~g~----~~~~~SPDG~~Ia~~~~~~--~~~~~~~~~~I~v~d~~ 357 (419)
T PRK04043 314 E-----------Q-V-VFHGK----NNSSVSTYKNYIVYSSRET--NNEFGKNTFNLYLISTN 357 (419)
T ss_pred E-----------e-C-ccCCC----cCceECCCCCEEEEEEcCC--CcccCCCCcEEEEEECC
Confidence 0 0 1 11111 1248999999988776532 111 11467777876
No 303
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.81 E-value=9.4e-07 Score=79.47 Aligned_cols=214 Identities=14% Similarity=0.184 Sum_probs=127.0
Q ss_pred EEEEECCCCCEEEEecC---C---CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 13 FALAMCPTEPYVLSGGK---D---KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~---d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
..++|-.||.++|+.+. + +.+|||+-+.. .. ..
T Consensus 213 ~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~-L~----------------------------------------st 251 (928)
T PF04762_consen 213 VRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGE-LQ----------------------------------------ST 251 (928)
T ss_pred eEEEECCCCcEEEEEEEEcCCCceeEEEEECCCce-EE----------------------------------------ec
Confidence 48999999999998764 2 57999986521 11 01
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcC---CCeEEEEEcCCCCcc-eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGD---DSCLILWDARVGTSP-VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
-+.-.+--.+++|-|.| +++|+.-. ...|.+|.-+.-+.. ....+......|..++|++ ++..||.-..|. |.
T Consensus 252 SE~v~gLe~~l~WrPsG-~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~-ds~iLAv~~~~~-vq 328 (928)
T PF04762_consen 252 SEPVDGLEGALSWRPSG-NLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNS-DSEILAVWLEDR-VQ 328 (928)
T ss_pred cccCCCccCCccCCCCC-CEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECC-CCCEEEEEecCC-ce
Confidence 11112223467999999 77877664 356777774432211 1111224456899999999 999999977655 99
Q ss_pred EEecCCCCCCCCCCceeeeccC-CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccc-------------------
Q 021657 163 MFDRRNLTSNGVGSPINKFEGH-SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV------------------- 222 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~------------------- 222 (309)
+|-..+.. +-..+.+.-. ...+..+.|+|....-|...+.+|.+..+++.-.-...
T Consensus 329 LWt~~NYH----WYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~l 404 (928)
T PF04762_consen 329 LWTRSNYH----WYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKL 404 (928)
T ss_pred EEEeeCCE----EEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeE
Confidence 99887632 2233333322 23345599999877766677776777665543210000
Q ss_pred cCC-CCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 223 EQG-PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 223 ~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
... .+....|+.+....-.-..+|.+++|++++..++ +... ||.|.+|....
T Consensus 405 llTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~a-vl~~-------d~~l~~~~~~~ 457 (928)
T PF04762_consen 405 LLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFA-VLTS-------DGSLSIYEWDL 457 (928)
T ss_pred EEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEE-EEEC-------CCCEEEEEecC
Confidence 000 0111112222222222356899999999877644 3333 38999999653
No 304
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.79 E-value=5.6e-06 Score=63.61 Aligned_cols=204 Identities=14% Similarity=0.168 Sum_probs=123.4
Q ss_pred EEEEECC-CCCEEEEecCCCc-EEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 13 FALAMCP-TEPYVLSGGKDKS-VVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 13 ~~~~~~~-~~~~l~t~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
..++.+| ++..++.+-.-|+ ..+||..++........ ..-+.|.+|
T Consensus 8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a--------------------------------~~gRHFyGH 55 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWA--------------------------------PPGRHFYGH 55 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcC--------------------------------CCCCEEecC
Confidence 4678888 5566777777665 67789886533222111 112344555
Q ss_pred cCCeEEEEEecCCCcEEEEEc-----CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC--------
Q 021657 91 EDTVEDVTFCPSSAQEFCSVG-----DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-------- 157 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------- 157 (309)
. .|+++| .+|++.- ..|.|-|||... ....+..+..+.-.-..+.+.| ++..|+++..
T Consensus 56 g------~fs~dG-~~LytTEnd~~~g~G~IgVyd~~~-~~~ri~E~~s~GIGPHel~l~p-DG~tLvVANGGI~Thpd~ 126 (305)
T PF07433_consen 56 G------VFSPDG-RLLYTTENDYETGRGVIGVYDAAR-GYRRIGEFPSHGIGPHELLLMP-DGETLVVANGGIETHPDS 126 (305)
T ss_pred E------EEcCCC-CEEEEeccccCCCcEEEEEEECcC-CcEEEeEecCCCcChhhEEEcC-CCCEEEEEcCCCccCccc
Confidence 3 799999 5555543 358999999983 3235667777777778889999 8877777631
Q ss_pred ----------CCcEEEEecCCCCCCCCCCceee--e--ccCCCCeeEEEEecCCCcEEEEecCCCc-------EEEEeCC
Q 021657 158 ----------DNSVRMFDRRNLTSNGVGSPINK--F--EGHSAAVLCVQWSPDKSSVFGSSAEDGL-------LNIWDYE 216 (309)
Q Consensus 158 ----------dg~i~i~d~~~~~~~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~l~~~~~~dg~-------i~iwd~~ 216 (309)
+-.+.+.|.++ ++.+.+ + ..|...|..+++.++|. ++...-..|. +-+++..
T Consensus 127 GR~kLNl~tM~psL~~ld~~s------G~ll~q~~Lp~~~~~lSiRHLa~~~~G~-V~~a~Q~qg~~~~~~PLva~~~~g 199 (305)
T PF07433_consen 127 GRAKLNLDTMQPSLVYLDARS------GALLEQVELPPDLHQLSIRHLAVDGDGT-VAFAMQYQGDPGDAPPLVALHRRG 199 (305)
T ss_pred CceecChhhcCCceEEEecCC------CceeeeeecCccccccceeeEEecCCCc-EEEEEecCCCCCccCCeEEEEcCC
Confidence 11233344444 666655 3 33667899999999987 3323222221 2222222
Q ss_pred cccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
. ....... .......-...+-+|++++++..+++|+=.- +.+.+||..
T Consensus 200 ~---~~~~~~~-------p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG-------g~~~~~d~~ 247 (305)
T PF07433_consen 200 G---ALRLLPA-------PEEQWRRLNGYIGSIAADRDGRLIAVTSPRG-------GRVAVWDAA 247 (305)
T ss_pred C---cceeccC-------ChHHHHhhCCceEEEEEeCCCCEEEEECCCC-------CEEEEEECC
Confidence 2 0100000 0001123456899999999999888866555 999999998
No 305
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=8.1e-08 Score=74.47 Aligned_cols=134 Identities=13% Similarity=0.167 Sum_probs=96.7
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI 152 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 152 (309)
++..+..+.+....+.++...|.+++|+|....++..++.+..|+|.|+++.. ....+..+ ..+++++|+-++.+++
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~--~vssy~a~-~~~wSC~wDlde~h~I 251 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC--VVSSYIAY-NQIWSCCWDLDERHVI 251 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccce--eeeheecc-CCceeeeeccCCccee
Confidence 44455556666777888999999999999885588899999999999999887 56666666 7899999998778899
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCceeeecc--CCCCeeEEEE------ecCCCcEEEEecCCCcEEEEeCCc
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPINKFEG--HSAAVLCVQW------SPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~~~v~~~~~------~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+|...|.|.|||+|.+ ..++..+.+ ...+|..++. .+.|. +++....+ +..|++..
T Consensus 252 YaGl~nG~VlvyD~R~~-----~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gg-lLv~~lt~--l~f~ei~~ 316 (463)
T KOG1645|consen 252 YAGLQNGMVLVYDMRQP-----EGPLMELVANVTINPVHKIAPVQPNKIFTSGG-LLVFALTV--LQFYEIVF 316 (463)
T ss_pred EEeccCceEEEEEccCC-----CchHhhhhhhhccCcceeecccCccccccccc-eEEeeehh--hhhhhhhc
Confidence 99999999999999985 334444433 2234433332 23344 44344332 45676654
No 306
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.75 E-value=9.3e-06 Score=66.74 Aligned_cols=151 Identities=15% Similarity=0.275 Sum_probs=95.2
Q ss_pred EEEEEecCCCcEEEEEc----CCCe----EEEEEcCCCCcceE-EEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 95 EDVTFCPSSAQEFCSVG----DDSC----LILWDARVGTSPVI-KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~----~dg~----i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
.++.|+-..++.+.+.. .+|. -++|++...+.... ......+..+.+++++| +...++.|+.||.|.+||
T Consensus 209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD 287 (545)
T PF11768_consen 209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSP-SEDKLVLGCEDGSIILYD 287 (545)
T ss_pred EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCc-ccceEEEEecCCeEEEEE
Confidence 46677654434454432 2333 34666655442211 12235678899999999 999999999999999999
Q ss_pred cCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC-cCCCCceeeeecCCCc
Q 021657 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT-TNYPAGLFFQHAGHRD 244 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 244 (309)
... + +..+....-.++.++|+|+|. ++++|+..|.+.+||+.-..-..+..... .+.+.-.+..+..+..
T Consensus 288 ~~~------~--~t~~~ka~~~P~~iaWHp~ga-i~~V~s~qGelQ~FD~ALspi~~qLlsEd~~P~~~L~Ls~yf~~~~ 358 (545)
T PF11768_consen 288 TTR------G--VTLLAKAEFIPTLIAWHPDGA-IFVVGSEQGELQCFDMALSPIKMQLLSEDATPKSTLQLSKYFRVSS 358 (545)
T ss_pred cCC------C--eeeeeeecccceEEEEcCCCc-EEEEEcCCceEEEEEeecCccceeeccccCCCccEEeeehhccCcc
Confidence 876 2 222333445678999999999 56799999999999997633222221111 1111112223334566
Q ss_pred ceeeEEEccCC
Q 021657 245 KVVDFHWNASD 255 (309)
Q Consensus 245 ~v~~~~~~~~~ 255 (309)
.+..+.|.+..
T Consensus 359 ~L~~iqW~~~~ 369 (545)
T PF11768_consen 359 SLVHIQWAPAP 369 (545)
T ss_pred hhheeEeccCC
Confidence 77888898643
No 307
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.74 E-value=7.8e-06 Score=65.01 Aligned_cols=187 Identities=13% Similarity=0.136 Sum_probs=107.5
Q ss_pred EEEEECCCCCEEEEec-C-CCcEEEEeCCccccccccCCcc---ccccCCCCceeecCCCCCCCCcccCCC-CCc----C
Q 021657 13 FALAMCPTEPYVLSGG-K-DKSVVLWSIQDHITSSATDPAT---AKSAGSSGSIIKQSPKPGDGNDKAADG-PSV----G 82 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~-~-dg~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~ 82 (309)
..++++|||++|+... . +..|-|.|+.+........... ............+..+ ....... .++ .
T Consensus 108 ~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg----~~~~v~~d~~g~~~~~ 183 (352)
T TIGR02658 108 WMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDG----SLAKVGYGTKGNPKIK 183 (352)
T ss_pred ceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecC----ceEEEEecCCCceEEe
Confidence 3789999999988766 3 7899999999874433322211 0011111111111110 0000000 000 0
Q ss_pred ccccccc-----ccCCeEEEEEec-CCCcEEEEEcCCCeEEEEEcCCCCcce---EEEeec-------cCCceeEEEecc
Q 021657 83 PRGIYNG-----HEDTVEDVTFCP-SSAQEFCSVGDDSCLILWDARVGTSPV---IKVEKA-------HDADLHCVDWNP 146 (309)
Q Consensus 83 ~~~~~~~-----~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~-------~~~~v~~~~~~~ 146 (309)
....+.. ...+ .|.+ +| .++....+ |.|.+.|+....... ...+.. ......-++++|
T Consensus 184 ~~~vf~~~~~~v~~rP----~~~~~dg-~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~ 257 (352)
T TIGR02658 184 PTEVFHPEDEYLINHP----AYSNKSG-RLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHR 257 (352)
T ss_pred eeeeecCCccccccCC----ceEcCCC-cEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcC
Confidence 0001111 0112 4455 66 55655555 999999975443111 111110 123334599999
Q ss_pred CCCCeEEEEc----------CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCC-cEEEEecCCCcEEEEeC
Q 021657 147 LDDNLILTGS----------ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS-SVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 147 ~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~dg~i~iwd~ 215 (309)
+++.+++.. ..+.|.++|..+ .+.+..+.. ...+..|+++||++ .|+++...++.|.++|.
T Consensus 258 -dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t------~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~ 329 (352)
T TIGR02658 258 -ARDRIYLLADQRAKWTHKTASRFLFVVDAKT------GKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDA 329 (352)
T ss_pred -CCCEEEEEecCCccccccCCCCEEEEEECCC------CeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence 777776632 225799999998 888888874 45788999999999 77766667899999999
Q ss_pred Cc
Q 021657 216 EK 217 (309)
Q Consensus 216 ~~ 217 (309)
.+
T Consensus 330 ~t 331 (352)
T TIGR02658 330 ET 331 (352)
T ss_pred cC
Confidence 87
No 308
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.73 E-value=2.4e-07 Score=79.20 Aligned_cols=186 Identities=11% Similarity=0.175 Sum_probs=123.8
Q ss_pred CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEE
Q 021657 20 TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTF 99 (309)
Q Consensus 20 ~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 99 (309)
++..++-|+-...+..+|+.+...............--.........+...|.+.+-|..+.+.++.+..|++.|.++..
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv 225 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV 225 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence 45566667777777777877654333322221111111111223444556677888888899999999999999987665
Q ss_pred ecCCCcEEEEEcC---------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 100 CPSSAQEFCSVGD---------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 100 ~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
.| ++|++||. |.-|+|||++..+. ...+.-+.+ ..-+.|+|.-...+++.+..|...+.|..+..
T Consensus 226 --~G-NlLitCG~S~R~~~l~~D~FvkVYDLRmmra--l~PI~~~~~-P~flrf~Psl~t~~~V~S~sGq~q~vd~~~ls 299 (1118)
T KOG1275|consen 226 --QG-NLLITCGYSMRRYNLAMDPFVKVYDLRMMRA--LSPIQFPYG-PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLS 299 (1118)
T ss_pred --cC-CeEEEeecccccccccccchhhhhhhhhhhc--cCCcccccC-chhhhhcccccceEEEEecccceeeccccccC
Confidence 45 67888874 67789999998772 322222223 25678888667789999999999999944321
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEe
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd 214 (309)
.. ...+..+......+..+++++++.. +|.|..+|.|.+|.
T Consensus 300 NP--~~~~~~v~p~~s~i~~fDiSsn~~a-lafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 300 NP--PAGVKMVNPNGSGISAFDISSNGDA-LAFGDHEGHVNLWA 340 (1118)
T ss_pred CC--ccceeEEccCCCcceeEEecCCCce-EEEecccCcEeeec
Confidence 10 1222333334456999999999994 78999999999998
No 309
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.71 E-value=8.9e-06 Score=65.42 Aligned_cols=138 Identities=17% Similarity=0.237 Sum_probs=91.5
Q ss_pred CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE--cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEE
Q 021657 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG--SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 191 (309)
Q Consensus 114 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 191 (309)
..+.|+++.... +.....-.++|...+|.| .++.|++. ..+..+.++|++. .....+ ....=+.+
T Consensus 255 snLyl~~~~e~~---i~V~~~~~~pVhdf~W~p-~S~~F~vi~g~~pa~~s~~~lr~-------Nl~~~~--Pe~~rNT~ 321 (561)
T COG5354 255 SNLYLLRITERS---IPVEKDLKDPVHDFTWEP-LSSRFAVISGYMPASVSVFDLRG-------NLRFYF--PEQKRNTI 321 (561)
T ss_pred ceEEEEeecccc---cceeccccccceeeeecc-cCCceeEEecccccceeeccccc-------ceEEec--CCcccccc
Confidence 568888887544 223335578999999999 66655544 4688999999995 433333 45556778
Q ss_pred EEecCCCcEEEEecC--CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCC
Q 021657 192 QWSPDKSSVFGSSAE--DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDST 269 (309)
Q Consensus 192 ~~~~~~~~l~~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~ 269 (309)
.|+|.++++|..|-. .|.+.+||....- .++..+.+. ...-+.|+|+++++....-.. ==
T Consensus 322 ~fsp~~r~il~agF~nl~gni~i~~~~~rf--------------~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~--k~ 383 (561)
T COG5354 322 FFSPHERYILFAGFDNLQGNIEIFDPAGRF--------------KVAGAFNGL--NTSYCDWSPDGQFYDTDTTSE--KL 383 (561)
T ss_pred cccCcccEEEEecCCccccceEEeccCCce--------------EEEEEeecC--CceEeeccCCceEEEecCCCc--cc
Confidence 999999997754432 3779999987611 122233332 345578999999877543211 11
Q ss_pred CCCCeEEEEEccc
Q 021657 270 GGGGTLQIWRMSD 282 (309)
Q Consensus 270 ~~dg~v~vw~~~~ 282 (309)
-.|..++|||+..
T Consensus 384 ~~Dn~i~l~~v~g 396 (561)
T COG5354 384 RVDNSIKLWDVYG 396 (561)
T ss_pred ccCcceEEEEecC
Confidence 3479999999984
No 310
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.71 E-value=1.9e-05 Score=60.66 Aligned_cols=150 Identities=13% Similarity=0.145 Sum_probs=93.5
Q ss_pred cCCeEEEEEecCCCcEEEEEcCC--------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEcCCCcE
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDD--------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGSADNSV 161 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i 161 (309)
....+++++.++| ++.++.... |.|..++.. ++ .......-...+.++|+| +++.| ++-+..+.|
T Consensus 85 ~~~~ND~~vd~~G-~ly~t~~~~~~~~~~~~g~v~~~~~~-~~---~~~~~~~~~~pNGi~~s~-dg~~lyv~ds~~~~i 158 (246)
T PF08450_consen 85 FNRPNDVAVDPDG-NLYVTDSGGGGASGIDPGSVYRIDPD-GK---VTVVADGLGFPNGIAFSP-DGKTLYVADSFNGRI 158 (246)
T ss_dssp TEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE---EEEEEEEESSEEEEEEET-TSSEEEEEETTTTEE
T ss_pred cCCCceEEEcCCC-CEEEEecCCCccccccccceEEECCC-Ce---EEEEecCcccccceEECC-cchheeeccccccee
Confidence 3568899999999 666665543 557777765 34 223333345678999999 78765 466778899
Q ss_pred EEEecCCCCCC-CCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 162 RMFDRRNLTSN-GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 162 ~i~d~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
..|++...... ...+....+....+..-.+++..+|. |+++....+.|.+++.+. + .+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~~~~~I~~~~p~G--~--------------~~~~i~ 221 (246)
T PF08450_consen 159 WRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN-LWVADWGGGRIVVFDPDG--K--------------LLREIE 221 (246)
T ss_dssp EEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEETTTEEEEEETTS--C--------------EEEEEE
T ss_pred EEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC-EEEEEcCCCEEEEECCCc--c--------------EEEEEc
Confidence 99998753210 00011222333233477899999998 566666788999999763 2 233333
Q ss_pred CCCcceeeEEE-ccCCCeEEEEec
Q 021657 241 GHRDKVVDFHW-NASDPWTVVSVS 263 (309)
Q Consensus 241 ~~~~~v~~~~~-~~~~~~~~~s~s 263 (309)
.....+++++| -|+...|+++.+
T Consensus 222 ~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 222 LPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp -SSSSEEEEEEESTTSSEEEEEEB
T ss_pred CCCCCEEEEEEECCCCCEEEEEeC
Confidence 33447899999 467777877643
No 311
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.68 E-value=7e-08 Score=82.33 Aligned_cols=173 Identities=12% Similarity=0.181 Sum_probs=123.2
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC-
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN- 159 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg- 159 (309)
.+....+..|+...+|++|+-.. +.|+.|+..|.|+++++.++. .......|.++|+-+.-+. ++..+++.+.-.
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~-~hL~vG~~~Geik~~nv~sG~--~e~s~ncH~SavT~vePs~-dgs~~Ltsss~S~ 1166 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGT-NHLAVGSHAGEIKIFNVSSGS--MEESVNCHQSAVTLVEPSV-DGSTQLTSSSSSS 1166 (1516)
T ss_pred cccchhhhccccceeeEEeecCC-ceEEeeeccceEEEEEccCcc--ccccccccccccccccccC-CcceeeeeccccC
Confidence 45566778889999999999877 889999999999999999988 5677788999999999888 777766655443
Q ss_pred -cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 160 -SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 160 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
-.-+|++... +.+.++|.. -.++.|+....+ -+.|+.-....+||+.+....... +..
T Consensus 1167 PlsaLW~~~s~-----~~~~Hsf~e----d~~vkFsn~~q~-r~~gt~~d~a~~YDvqT~~~l~ty-----------lt~ 1225 (1516)
T KOG1832|consen 1167 PLSALWDASST-----GGPRHSFDE----DKAVKFSNSLQF-RALGTEADDALLYDVQTCSPLQTY-----------LTD 1225 (1516)
T ss_pred chHHHhccccc-----cCccccccc----cceeehhhhHHH-HHhcccccceEEEecccCcHHHHh-----------cCc
Confidence 3568998763 667777763 246788876543 235555567899999984443221 111
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK 297 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~ 297 (309)
..+.+..-+...|+|.+..++ +.=.+||++ ..+.+..|..
T Consensus 1226 ~~~~~y~~n~a~FsP~D~LIl-------------ndGvLWDvR------~~~aIh~FD~ 1265 (1516)
T KOG1832|consen 1226 TVTSSYSNNLAHFSPCDTLIL-------------NDGVLWDVR------IPEAIHRFDQ 1265 (1516)
T ss_pred chhhhhhccccccCCCcceEe-------------eCceeeeec------cHHHHhhhhh
Confidence 112222337788999888777 444689999 4555665543
No 312
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.66 E-value=5e-06 Score=68.29 Aligned_cols=176 Identities=13% Similarity=0.114 Sum_probs=94.4
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCccccc--cCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCe----
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKS--AGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTV---- 94 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---- 94 (309)
+..++.++.+|.+..+|.+++............. +........ ....++.+..++..+++.+..+......+
T Consensus 105 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~--v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~ 182 (377)
T TIGR03300 105 GGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVV--VRTNDGRLTALDAATGERLWTYSRVTPALTLRG 182 (377)
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEE--EECCCCeEEEEEcCCCceeeEEccCCCceeecC
Confidence 4566677777888888877664433322211110 000001111 12235566677776666554443222111
Q ss_pred -EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-cC---Cc------e-eEEEeccCCCCeEEEEcCCCcEE
Q 021657 95 -EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-HD---AD------L-HCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 95 -~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~---~~------v-~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.+... .+ ..++.+..+|.+..+|.++++. .-.... .. .. + ....+ .+..+++++.+|.++
T Consensus 183 ~~sp~~-~~--~~v~~~~~~g~v~ald~~tG~~--~W~~~~~~~~g~~~~~~~~~~~~~p~~---~~~~vy~~~~~g~l~ 254 (377)
T TIGR03300 183 SASPVI-AD--GGVLVGFAGGKLVALDLQTGQP--LWEQRVALPKGRTELERLVDVDGDPVV---DGGQVYAVSYQGRVA 254 (377)
T ss_pred CCCCEE-EC--CEEEEECCCCEEEEEEccCCCE--eeeeccccCCCCCchhhhhccCCccEE---ECCEEEEEEcCCEEE
Confidence 01111 12 3567788889999999988872 221110 00 00 0 11111 245677788899999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.||..+ ++.+...... ....... .+.+++ .++.||.+..+|..+
T Consensus 255 a~d~~t------G~~~W~~~~~--~~~~p~~--~~~~vy-v~~~~G~l~~~d~~t 298 (377)
T TIGR03300 255 ALDLRS------GRVLWKRDAS--SYQGPAV--DDNRLY-VTDADGVVVALDRRS 298 (377)
T ss_pred EEECCC------CcEEEeeccC--CccCceE--eCCEEE-EECCCCeEEEEECCC
Confidence 999988 7777665521 1222222 344454 677899999999976
No 313
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.63 E-value=3.5e-05 Score=62.89 Aligned_cols=261 Identities=10% Similarity=0.120 Sum_probs=145.8
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccc---cCCCCceeecC--------CCCCCCCcccCCCCCc
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKS---AGSSGSIIKQS--------PKPGDGNDKAADGPSV 81 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 81 (309)
+-+.|||-|.||+|--.-| |.+|-=.+-.....+....... ......+..++ .......+.+||..++
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG 292 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFYHPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATG 292 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhccCCCceeeecCCccceEEEecCCccccCcccCCCceEEEEEcccc
Confidence 3567888888888777654 4577544332222221111110 00111111111 1233466788888888
Q ss_pred Cccccccc--ccCCeE-EEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-
Q 021657 82 GPRGIYNG--HEDTVE-DVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA- 157 (309)
Q Consensus 82 ~~~~~~~~--~~~~v~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~- 157 (309)
...+.+.. ....++ -..|+.++ .++|.-.. ..|.||+..+.. ......-.-..|....|+| .+++||-=..
T Consensus 293 ~lkrsF~~~~~~~~~WP~frWS~Dd-Ky~Arm~~-~sisIyEtpsf~--lld~Kslki~gIr~FswsP-~~~llAYwtpe 367 (698)
T KOG2314|consen 293 LLKRSFPVIKSPYLKWPIFRWSHDD-KYFARMTG-NSISIYETPSFM--LLDKKSLKISGIRDFSWSP-TSNLLAYWTPE 367 (698)
T ss_pred chhcceeccCCCccccceEEeccCC-ceeEEecc-ceEEEEecCcee--eecccccCCccccCcccCC-CcceEEEEccc
Confidence 77766654 222333 35799988 77776655 469999876543 2222222346788999999 7776664322
Q ss_pred ----CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEe---------cCCCcEEEEeCCcccccccC
Q 021657 158 ----DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS---------AEDGLLNIWDYEKVGKKVEQ 224 (309)
Q Consensus 158 ----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~~dg~i~iwd~~~~~~~~~~ 224 (309)
-..+.+..+.+ ++.+++-.-+.-.=..+-|..+|.+|.+-. +.-..+.|+.++...-+
T Consensus 368 ~~~~parvtL~evPs------~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIp--- 438 (698)
T KOG2314|consen 368 TNNIPARVTLMEVPS------KREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIP--- 438 (698)
T ss_pred ccCCcceEEEEecCc------cceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCC---
Confidence 12455555555 555555544444445577888888643211 11123556666552111
Q ss_pred CCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEE
Q 021657 225 GPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVIS 304 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~ 304 (309)
+ ..-.-...|...+|-|.|+.+.+..+.+ .-.++.+|.+... ....+++.++.. .....
T Consensus 439 -----------v-e~velke~vi~FaWEP~gdkF~vi~g~~-----~k~tvsfY~~e~~--~~~~~lVk~~dk--~~~N~ 497 (698)
T KOG2314|consen 439 -----------V-EVVELKESVIAFAWEPHGDKFAVISGNT-----VKNTVSFYAVETN--IKKPSLVKELDK--KFANT 497 (698)
T ss_pred -----------c-eeeecchheeeeeeccCCCeEEEEEccc-----cccceeEEEeecC--CCchhhhhhhcc--cccce
Confidence 1 1122346789999999999877766654 2468999998831 124556666654 45666
Q ss_pred eeeCC
Q 021657 305 CTSKP 309 (309)
Q Consensus 305 ~~~~P 309 (309)
+-|+|
T Consensus 498 vfwsP 502 (698)
T KOG2314|consen 498 VFWSP 502 (698)
T ss_pred EEEcC
Confidence 77766
No 314
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.61 E-value=1.7e-05 Score=70.51 Aligned_cols=115 Identities=17% Similarity=0.378 Sum_probs=74.7
Q ss_pred EEEEEecCCCcEEEEEc----CC-CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc---CCCcEEEEec
Q 021657 95 EDVTFCPSSAQEFCSVG----DD-SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS---ADNSVRMFDR 166 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~----~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~ 166 (309)
+.|.|--|| .+|++.. .+ ..|++||-+ +.. -..-......=.+++|-| .|..+++-. .|+.|.+|.-
T Consensus 199 ~~IsWRgDg-~~fAVs~~~~~~~~RkirV~drE-g~L--ns~se~~~~l~~~LsWkP-sgs~iA~iq~~~sd~~IvffEr 273 (1265)
T KOG1920|consen 199 TSISWRGDG-EYFAVSFVESETGTRKIRVYDRE-GAL--NSTSEPVEGLQHSLSWKP-SGSLIAAIQCKTSDSDIVFFER 273 (1265)
T ss_pred ceEEEccCC-cEEEEEEEeccCCceeEEEeccc-chh--hcccCcccccccceeecC-CCCeEeeeeecCCCCcEEEEec
Confidence 468999888 7777732 23 799999976 441 111122233446899999 898888763 3567888875
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEE---ecCCCcEEEEeCCcc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS---SAEDGLLNIWDYEKV 218 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~dg~i~iwd~~~~ 218 (309)
..... +.....+......+..++|+.++. +||. ......|++|-+.+.
T Consensus 274 NGL~h---g~f~l~~p~de~~ve~L~Wns~sd-iLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 274 NGLRH---GEFVLPFPLDEKEVEELAWNSNSD-ILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred CCccc---cccccCCcccccchheeeecCCCC-ceeeeecccccceEEEEEecCe
Confidence 53211 222222333344589999999999 5665 455556999998873
No 315
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=1.1e-06 Score=69.39 Aligned_cols=205 Identities=14% Similarity=0.109 Sum_probs=135.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecC-CCcEEEEeCCccc----cccccCCccccccCCC--CceeecCCCCCCCCcc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGK-DKSVVLWSIQDHI----TSSATDPATAKSAGSS--GSIIKQSPKPGDGNDK 74 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~-dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 74 (309)
+.++.|.+ .|.+++.+-++.++.|.+. |..++++|+++-. ......+......... ............+.+.
T Consensus 47 KhFraHL~-~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~ 125 (558)
T KOG0882|consen 47 KHFRAHLG-VILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIF 125 (558)
T ss_pred hhhHHHHH-HHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcE
Confidence 34667888 8899999999999999887 9999999998642 1222223222222222 2223333344556666
Q ss_pred cCCCCCcC--cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-CCcc------------eEEEeeccCCce
Q 021657 75 AADGPSVG--PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSP------------VIKVEKAHDADL 139 (309)
Q Consensus 75 ~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~------------~~~~~~~~~~~v 139 (309)
++|..... ....-.-|..+|..+.+++.+ ..+++....|.|.-|.... -+.+ ....+...+...
T Consensus 126 VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~-Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~p 204 (558)
T KOG0882|consen 126 VVDGFGDFCQDGYFKKLHFSPVKKIRYNQAG-DSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEP 204 (558)
T ss_pred EECCcCCcCccceecccccCceEEEEeeccc-cceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCc
Confidence 66655433 333345699999999999998 7788888899999998763 1110 011122345667
Q ss_pred eEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc--------------------------------CC-C
Q 021657 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG--------------------------------HS-A 186 (309)
Q Consensus 140 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--------------------------------~~-~ 186 (309)
.++.|+| ++..+.+-+.|..|++++.++ ++.++.+.. +. .
T Consensus 205 ts~Efsp-~g~qistl~~DrkVR~F~~Kt------GklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~ 277 (558)
T KOG0882|consen 205 TSFEFSP-DGAQISTLNPDRKVRGFVFKT------GKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGST 277 (558)
T ss_pred cceEEcc-ccCcccccCcccEEEEEEecc------chhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCc
Confidence 8999999 999999999999999999998 444444321 11 1
Q ss_pred CeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.-+.+.|...+.+|| -|+-= -|++.++.+
T Consensus 278 ~~~~~~fdes~~fll-y~t~~-gikvin~~t 306 (558)
T KOG0882|consen 278 VGTNAVFDESGNFLL-YGTIL-GIKVINLDT 306 (558)
T ss_pred ccceeEEcCCCCEEE-eecce-eEEEEEeec
Confidence 234567888888765 44433 377777776
No 316
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.60 E-value=6.3e-05 Score=57.99 Aligned_cols=126 Identities=13% Similarity=0.197 Sum_probs=77.5
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEc------------------CCCeEEEEEcCCCCcceEEEe--eccCCceeE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVG------------------DDSCLILWDARVGTSPVIKVE--KAHDADLHC 141 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~------------------~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~ 141 (309)
+.+..+..|.-.-..+.+.|+++ .|+.+. .+..+..-|..+++......+ ..|...|.-
T Consensus 89 ~ri~E~~s~GIGPHel~l~pDG~-tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRH 167 (305)
T PF07433_consen 89 RRIGEFPSHGIGPHELLLMPDGE-TLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRH 167 (305)
T ss_pred EEEeEecCCCcChhhEEEcCCCC-EEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceee
Confidence 33444555555556677888873 344432 234455556666663222234 347778999
Q ss_pred EEeccCCCCeEEEEcCCCc-------EEEEecCCCCCCCCCCceeee-------ccCCCCeeEEEEecCCCcEEEEecCC
Q 021657 142 VDWNPLDDNLILTGSADNS-------VRMFDRRNLTSNGVGSPINKF-------EGHSAAVLCVQWSPDKSSVFGSSAED 207 (309)
Q Consensus 142 ~~~~~~~~~~l~~~~~dg~-------i~i~d~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~~d 207 (309)
+++.+ ++..++..-..|. +-+++.. ..+..+ ....+.+-+|++++++..+.+++-..
T Consensus 168 La~~~-~G~V~~a~Q~qg~~~~~~PLva~~~~g--------~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG 238 (305)
T PF07433_consen 168 LAVDG-DGTVAFAMQYQGDPGDAPPLVALHRRG--------GALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG 238 (305)
T ss_pred EEecC-CCcEEEEEecCCCCCccCCeEEEEcCC--------CcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC
Confidence 99988 7666655543332 2233322 222222 23457899999999999877788889
Q ss_pred CcEEEEeCCc
Q 021657 208 GLLNIWDYEK 217 (309)
Q Consensus 208 g~i~iwd~~~ 217 (309)
+.+.+||..+
T Consensus 239 g~~~~~d~~t 248 (305)
T PF07433_consen 239 GRVAVWDAAT 248 (305)
T ss_pred CEEEEEECCC
Confidence 9999999887
No 317
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.57 E-value=5.8e-08 Score=79.75 Aligned_cols=188 Identities=15% Similarity=0.168 Sum_probs=121.8
Q ss_pred cCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC----CCcEEEEe
Q 021657 91 EDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA----DNSVRMFD 165 (309)
Q Consensus 91 ~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~i~d 165 (309)
...+.|+++.-+. ..+++.|..+|.|.+-.++...-.-.....++..+.++++|++.+.+.||+|-. |..+.|||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 4456777765443 367889999999999988765432234556788899999999977788888843 46789999
Q ss_pred cCCCCCCCCCCceeeecc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 166 RRNLTSNGVGSPINKFEG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
+.+.-..+ +.-..|.+ .....++++|..+.+ ++.+|.....+.++|++... .....-.+.
T Consensus 136 i~s~ltvP--ke~~~fs~~~l~gqns~cwlrd~k-lvlaGm~sr~~~ifdlRqs~----------------~~~~svnTk 196 (783)
T KOG1008|consen 136 INSLLTVP--KESPLFSSSTLDGQNSVCWLRDTK-LVLAGMTSRSVHIFDLRQSL----------------DSVSSVNTK 196 (783)
T ss_pred cccccCCC--ccccccccccccCccccccccCcc-hhhcccccchhhhhhhhhhh----------------hhhhhhhhh
Confidence 98742111 11111222 334566899997777 55688888899999998411 111122334
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccc----eEEEeeeCC
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKA----HVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~----~v~~~~~~P 309 (309)
.+..+...|-.+.++++- .||.|.+||.... -..++..+...+. .+..++|.|
T Consensus 197 ~vqG~tVdp~~~nY~cs~--------~dg~iAiwD~~rn----ienpl~~i~~~~N~~~~~l~~~aycP 253 (783)
T KOG1008|consen 197 YVQGITVDPFSPNYFCSN--------SDGDIAIWDTYRN----IENPLQIILRNENKKPKQLFALAYCP 253 (783)
T ss_pred hcccceecCCCCCceecc--------ccCceeeccchhh----hccHHHHHhhCCCCcccceeeEEecc
Confidence 567777888444456433 3589999994311 2344554442233 488888877
No 318
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.57 E-value=7.3e-06 Score=66.67 Aligned_cols=148 Identities=14% Similarity=0.168 Sum_probs=83.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc-ccCCcccc-------ccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS-ATDPATAK-------SAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.|+.+.|+++..-|+.|...|.|.||.+....... ...+.... .......+..+....... + .....
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~---~--~~gf~ 77 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPS---L--KEGFL 77 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT------SEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcc---c--ccccC
Confidence 48899999999999999999999999987643222 00000000 000011111111000000 0 01133
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE--eec------cCCceeEEEecc----CC--
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV--EKA------HDADLHCVDWNP----LD-- 148 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~------~~~~v~~~~~~~----~~-- 148 (309)
+...+....++|++++.+.-| +++.|+.+|.+.|.|++... ++.. +.. ....++++.|.- .+
T Consensus 78 P~~l~~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPa--vI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~y 153 (395)
T PF08596_consen 78 PLTLLDAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPA--VIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGY 153 (395)
T ss_dssp EEEEE---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTE--EEEEEEGGG--T-SS----EEEEEEEEEE-TTSSS
T ss_pred chhheeccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCe--EEeeccccccccccccccCeeEEEEEEEecCCCcc
Confidence 445556678999999998776 89999999999999997665 3332 122 234677888852 12
Q ss_pred -CCeEEEEcCCCcEEEEecC
Q 021657 149 -DNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 149 -~~~l~~~~~dg~i~i~d~~ 167 (309)
.-.+++|...|.+.+|.+.
T Consensus 154 SSi~L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 154 SSICLLVGTNSGNVLTFKIL 173 (395)
T ss_dssp EEEEEEEEETTSEEEEEEEE
T ss_pred cceEEEEEeCCCCEEEEEEe
Confidence 2478999999999999885
No 319
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.49 E-value=2.9e-05 Score=63.87 Aligned_cols=176 Identities=17% Similarity=0.082 Sum_probs=95.3
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCcccc-------ccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc---
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAK-------SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH--- 90 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (309)
+..++.++.+|.|..||.+++............ .+....... ..+..++.+..++..+++.+......
T Consensus 145 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v--~~~~~~g~v~ald~~tG~~~W~~~~~~~~ 222 (377)
T TIGR03300 145 NGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGV--LVGFAGGKLVALDLQTGQPLWEQRVALPK 222 (377)
T ss_pred CCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEE--EEECCCCEEEEEEccCCCEeeeeccccCC
Confidence 456777888999999999887543332211100 000000011 11222344555555554433221100
Q ss_pred --c--CC---e-EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 91 --E--DT---V-EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 91 --~--~~---v-~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
. .. + ....+ .+ ..++.++.+|.+..+|..+++ ..-... .. ....... .+..+++++.+|.+.
T Consensus 223 g~~~~~~~~~~~~~p~~--~~-~~vy~~~~~g~l~a~d~~tG~--~~W~~~-~~-~~~~p~~---~~~~vyv~~~~G~l~ 292 (377)
T TIGR03300 223 GRTELERLVDVDGDPVV--DG-GQVYAVSYQGRVAALDLRSGR--VLWKRD-AS-SYQGPAV---DDNRLYVTDADGVVV 292 (377)
T ss_pred CCCchhhhhccCCccEE--EC-CEEEEEEcCCEEEEEECCCCc--EEEeec-cC-CccCceE---eCCEEEEECCCCeEE
Confidence 0 00 0 01111 13 357777889999999998887 333222 11 1222222 456777888999999
Q ss_pred EEecCCCCCCCCCCceeeeccCC-CCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHS-AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+|..+ ++.+.+..... ....+... .+..+ .+++.+|.++++|..+
T Consensus 293 ~~d~~t------G~~~W~~~~~~~~~~ssp~i--~g~~l-~~~~~~G~l~~~d~~t 339 (377)
T TIGR03300 293 ALDRRS------GSELWKNDELKYRQLTAPAV--VGGYL-VVGDFEGYLHWLSRED 339 (377)
T ss_pred EEECCC------CcEEEccccccCCccccCEE--ECCEE-EEEeCCCEEEEEECCC
Confidence 999988 77776653222 22222223 24444 5788999999999877
No 320
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.49 E-value=1.6e-05 Score=69.38 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=95.1
Q ss_pred CCCCcccCCCCCcCcccccccccCC-eEEEEEec-----CCCcEEEEEcCCCeEEEEEcCCCCcceEEE---eeccCCce
Q 021657 69 GDGNDKAADGPSVGPRGIYNGHEDT-VEDVTFCP-----SSAQEFCSVGDDSCLILWDARVGTSPVIKV---EKAHDADL 139 (309)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v 139 (309)
....++-.|+..++.+..+..|... |..++-.. +. .--+.|-.+..+..||.+-....++.. ........
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~-e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTN-EQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCC-CceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence 4566778888888888888877643 55543221 12 234566778889999998654222211 12334567
Q ss_pred eEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 140 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
+|++-.. ..++|+|+.+|.||+||--. .+....+.+...+|..|..+.||+++||+| +..+.+++..
T Consensus 581 s~~aTt~--~G~iavgs~~G~IRLyd~~g------~~AKT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlLi~t~ 647 (794)
T PF08553_consen 581 SCFATTE--DGYIAVGSNKGDIRLYDRLG------KRAKTALPGLGDPIIGIDVTADGKWILATC--KTYLLLIDTL 647 (794)
T ss_pred eEEEecC--CceEEEEeCCCcEEeecccc------hhhhhcCCCCCCCeeEEEecCCCcEEEEee--cceEEEEEEe
Confidence 7877664 56899999999999999432 333445667789999999999999988666 5678888864
No 321
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.39 E-value=5.1e-06 Score=68.21 Aligned_cols=74 Identities=20% Similarity=0.322 Sum_probs=61.8
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
.....|.+++++|+. ..|+.|+.||.|.+||...+. .. .....-..+.++|+| ++..+++|+..|.+.+||+.-
T Consensus 257 pL~s~v~~ca~sp~E-~kLvlGC~DgSiiLyD~~~~~---t~-~~ka~~~P~~iaWHp-~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 257 PLPSQVICCARSPSE-DKLVLGCEDGSIILYDTTRGV---TL-LAKAEFIPTLIAWHP-DGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred ecCCcceEEecCccc-ceEEEEecCCeEEEEEcCCCe---ee-eeeecccceEEEEcC-CCcEEEEEcCCceEEEEEeec
Confidence 356789999999998 789999999999999986554 22 223446678999999 999999999999999999875
No 322
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.38 E-value=3.1e-05 Score=66.45 Aligned_cols=181 Identities=9% Similarity=0.120 Sum_probs=115.2
Q ss_pred EEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCc-eeEEEeccCCCCeEEEEcCCCc-----EEEEecCCCCC
Q 021657 98 TFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDWNPLDDNLILTGSADNS-----VRMFDRRNLTS 171 (309)
Q Consensus 98 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~ 171 (309)
+|++.+ ..++.|+.+|.|.+.+-+ .+ ....++++... |..+.... ..++|++.+.|+. ++|||+...+.
T Consensus 30 c~~s~~-~~vvigt~~G~V~~Ln~s-~~--~~~~fqa~~~siv~~L~~~~-~~~~L~sv~Ed~~~np~llkiw~lek~~~ 104 (933)
T KOG2114|consen 30 CCSSST-GSVVIGTADGRVVILNSS-FQ--LIRGFQAYEQSIVQFLYILN-KQNFLFSVGEDEQGNPVLLKIWDLEKVDK 104 (933)
T ss_pred EEcCCC-ceEEEeeccccEEEeccc-ce--eeehheecchhhhhHhhccc-CceEEEEEeecCCCCceEEEEecccccCC
Confidence 355665 679999999999888743 22 34667777776 44444433 4468888777654 89999987643
Q ss_pred CCCCCce--eeecc-----CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 172 NGVGSPI--NKFEG-----HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 172 ~~~~~~~--~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
+....++ ..+.. ...++.+++.+.+-.. +|+|-.||.|..+.-+-....- ....-...-..
T Consensus 105 n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~-Iv~Gf~nG~V~~~~GDi~RDrg-----------sr~~~~~~~~~ 172 (933)
T KOG2114|consen 105 NNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKT-IVCGFTNGLVICYKGDILRDRG-----------SRQDYSHRGKE 172 (933)
T ss_pred CCCcceeeeeeeeccCCCCCCCcceEEEEEccccE-EEEEecCcEEEEEcCcchhccc-----------cceeeeccCCC
Confidence 3222233 12221 3567889999999774 7899999999988644311110 01111122356
Q ss_pred ceeeEEEccCCCe-EEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 245 KVVDFHWNASDPW-TVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~-~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+|+.+++..++.. ++++.- ..|.+|.+.. ....+..+..|..++.|.+|+|
T Consensus 173 pITgL~~~~d~~s~lFv~Tt---------~~V~~y~l~g-----r~p~~~~ld~~G~~lnCss~~~ 224 (933)
T KOG2114|consen 173 PITGLALRSDGKSVLFVATT---------EQVMLYSLSG-----RTPSLKVLDNNGISLNCSSFSD 224 (933)
T ss_pred CceeeEEecCCceeEEEEec---------ceeEEEEecC-----CCcceeeeccCCccceeeecCC
Confidence 8999999887776 333222 4899999983 2222444677777888877764
No 323
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.36 E-value=0.00017 Score=55.18 Aligned_cols=138 Identities=15% Similarity=0.173 Sum_probs=79.6
Q ss_pred EEEEEcCCCeEEEEEcCCCCcceEEE-eeccCC---ceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeee
Q 021657 106 EFCSVGDDSCLILWDARVGTSPVIKV-EKAHDA---DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF 181 (309)
Q Consensus 106 ~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~---~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 181 (309)
.++.++.++.|..+|..+++ .... ...... ....+.... .+..++++..++.|..+|+++ ++.+...
T Consensus 78 ~v~v~~~~~~l~~~d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~~~d~~t------G~~~w~~ 148 (238)
T PF13360_consen 78 RVYVGTSDGSLYALDAKTGK--VLWSIYLTSSPPAGVRSSSSPAV-DGDRLYVGTSSGKLVALDPKT------GKLLWKY 148 (238)
T ss_dssp EEEEEETTSEEEEEETTTSC--EEEEEEE-SSCTCSTB--SEEEE-ETTEEEEEETCSEEEEEETTT------TEEEEEE
T ss_pred ccccccceeeeEecccCCcc--eeeeeccccccccccccccCceE-ecCEEEEEeccCcEEEEecCC------CcEEEEe
Confidence 45556678899999999988 3333 222111 122233333 477888888899999999999 8888877
Q ss_pred ccCCCC----------eeEEEEecCCCcEEEEecCCCc-EEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 182 EGHSAA----------VLCVQWSPDKSSVFGSSAEDGL-LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 182 ~~~~~~----------v~~~~~~~~~~~l~~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
...... +..-....++ .++ .+..++. +.+ |+.+. ..+.... ...+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~-~~~~~g~~~~~-d~~tg---------------~~~w~~~--~~~~~~~- 207 (238)
T PF13360_consen 149 PVGEPRGSSPISSFSDINGSPVISDG-RVY-VSSGDGRVVAV-DLATG---------------EKLWSKP--ISGIYSL- 207 (238)
T ss_dssp ESSTT-SS--EEEETTEEEEEECCTT-EEE-EECCTSSEEEE-ETTTT---------------EEEEEEC--SS-ECEC-
T ss_pred ecCCCCCCcceeeecccccceEEECC-EEE-EEcCCCeEEEE-ECCCC---------------CEEEEec--CCCccCC-
Confidence 654322 1122222344 455 5555665 555 88872 2222222 1122221
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+.+..+++.. .+ +.|..||++
T Consensus 208 ~~~~~~~l~~~~-~~-------~~l~~~d~~ 230 (238)
T PF13360_consen 208 PSVDGGTLYVTS-SD-------GRLYALDLK 230 (238)
T ss_dssp EECCCTEEEEEE-TT-------TEEEEEETT
T ss_pred ceeeCCEEEEEe-CC-------CEEEEEECC
Confidence 234566666543 34 999999998
No 324
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.28 E-value=6.2e-05 Score=65.86 Aligned_cols=138 Identities=17% Similarity=0.227 Sum_probs=96.5
Q ss_pred cCCCeEEEEEcCCCCcceEEEeeccCCc-eeEEEecc----CCCCeEEEEcCCCcEEEEecCCCCCCCCCCcee----ee
Q 021657 111 GDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDWNP----LDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN----KF 181 (309)
Q Consensus 111 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~ 181 (309)
.....|+-.|++.++ ++..+..+... |..++-.. .+...-+.|-.+..+..||.|... .+.+. .+
T Consensus 501 ~~~~~ly~mDLe~GK--VV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~----~k~v~~~~k~Y 574 (794)
T PF08553_consen 501 NNPNKLYKMDLERGK--VVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSG----NKLVDSQSKQY 574 (794)
T ss_pred CCCCceEEEecCCCc--EEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCC----Cceeecccccc
Confidence 355778888999998 77777776643 54443211 123456677788899999999742 11221 22
Q ss_pred ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEE
Q 021657 182 EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVS 261 (309)
Q Consensus 182 ~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 261 (309)
..+...+|++-..+|. +|.|+.+|.||+||--. ......+.+-..+|..|..+.||.++++|
T Consensus 575 -~~~~~Fs~~aTt~~G~--iavgs~~G~IRLyd~~g---------------~~AKT~lp~lG~pI~~iDvt~DGkwilaT 636 (794)
T PF08553_consen 575 -SSKNNFSCFATTEDGY--IAVGSNKGDIRLYDRLG---------------KRAKTALPGLGDPIIGIDVTADGKWILAT 636 (794)
T ss_pred -ccCCCceEEEecCCce--EEEEeCCCcEEeecccc---------------hhhhhcCCCCCCCeeEEEecCCCcEEEEe
Confidence 2455688999888886 67999999999999422 11223455677899999999999999998
Q ss_pred ecCCCCCCCCCCeEEEEEcc
Q 021657 262 VSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 262 ~s~d~~s~~~dg~v~vw~~~ 281 (309)
|- ..|.++++.
T Consensus 637 c~---------tyLlLi~t~ 647 (794)
T PF08553_consen 637 CK---------TYLLLIDTL 647 (794)
T ss_pred ec---------ceEEEEEEe
Confidence 76 467777763
No 325
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.27 E-value=9.7e-05 Score=63.67 Aligned_cols=109 Identities=12% Similarity=0.163 Sum_probs=73.3
Q ss_pred EEEEECCCCCEEEEec----CCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 13 FALAMCPTEPYVLSGG----KDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
+-..|+|...+|+.++ .-|.|-||--..........|....+.--.........+-..+.+.+|.....+......
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~ 98 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVE 98 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEecCCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCceeeeecc
Confidence 4468999999998776 367888885332211111112222221112222334445556667777777777777778
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcC
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 122 (309)
.|..+|..+.|+++| ..++++..-|.|.+|...
T Consensus 99 th~a~i~~l~wS~~G-~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 99 THPAPIQGLDWSHDG-TVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCCCCceeEEecCCC-CeEEEcCCCceeEEEEee
Confidence 899999999999999 889999999999999875
No 326
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.26 E-value=0.00034 Score=57.18 Aligned_cols=140 Identities=16% Similarity=0.185 Sum_probs=94.8
Q ss_pred CCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCC------cEEEEEcCCCeEEEEEcCCCCcceEEEeeccC----
Q 021657 67 KPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSA------QEFCSVGDDSCLILWDARVGTSPVIKVEKAHD---- 136 (309)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---- 136 (309)
+.....++-.++..++.+....-+.. |+-+.+.|+.. ..-+.|-.|..|.-||.+-.....+.....|.
T Consensus 352 ~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k 430 (644)
T KOG2395|consen 352 GGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTK 430 (644)
T ss_pred CCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccc
Confidence 33345566667777777777776665 66677777641 11234557788999999865532333333332
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
....|.+-. ...++++|+.+|.||+||--. .+....+.+...+|..|..+.+|.++|+++ +..+.+-++.
T Consensus 431 ~nFsc~aTT--~sG~IvvgS~~GdIRLYdri~------~~AKTAlPgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~t~ 500 (644)
T KOG2395|consen 431 NNFSCFATT--ESGYIVVGSLKGDIRLYDRIG------RRAKTALPGLGDAIKHVDVTADGKWILATC--KTYLLLIDTL 500 (644)
T ss_pred cccceeeec--CCceEEEeecCCcEEeehhhh------hhhhhcccccCCceeeEEeeccCcEEEEec--ccEEEEEEEe
Confidence 345555544 467899999999999999743 444556778889999999999999977554 6677777765
Q ss_pred c
Q 021657 217 K 217 (309)
Q Consensus 217 ~ 217 (309)
-
T Consensus 501 ~ 501 (644)
T KOG2395|consen 501 I 501 (644)
T ss_pred c
Confidence 4
No 327
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.24 E-value=0.00053 Score=61.52 Aligned_cols=205 Identities=11% Similarity=0.219 Sum_probs=123.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.++.|..++.-++.+..+|.|.+-|.++... .....-
T Consensus 70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-----------------------------------------eivg~v 108 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITALGDIILVDPETLEL-----------------------------------------EIVGNV 108 (1265)
T ss_pred ceEEEEEecccceEEEEecCCcEEEEcccccce-----------------------------------------eeeeec
Confidence 688999999998898899999998887764311 111223
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcC----CCCc-----------------ceEEEeec---------------
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR----VGTS-----------------PVIKVEKA--------------- 134 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~----~~~~-----------------~~~~~~~~--------------- 134 (309)
...|.+++|+||. ..++..+..+++.+-+-. ..+. .....+.+
T Consensus 109 d~GI~aaswS~De-e~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek 187 (1265)
T KOG1920|consen 109 DNGISAASWSPDE-ELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEK 187 (1265)
T ss_pred cCceEEEeecCCC-cEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccc
Confidence 4679999999998 677777776776654321 0000 00001110
Q ss_pred ------cCCceeEEEeccCCCCeEEEE-----cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEE
Q 021657 135 ------HDADLHCVDWNPLDDNLILTG-----SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203 (309)
Q Consensus 135 ------~~~~v~~~~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 203 (309)
..+.=+++.|.- +|.++++. .....|++||... . .-..-....+.=.+++|-|.|.. +|+
T Consensus 188 ~~~~~~~~~~~~~IsWRg-Dg~~fAVs~~~~~~~~RkirV~drEg-~------Lns~se~~~~l~~~LsWkPsgs~-iA~ 258 (1265)
T KOG1920|consen 188 ALEQIEQDDHKTSISWRG-DGEYFAVSFVESETGTRKIRVYDREG-A------LNSTSEPVEGLQHSLSWKPSGSL-IAA 258 (1265)
T ss_pred cccchhhccCCceEEEcc-CCcEEEEEEEeccCCceeEEEecccc-h------hhcccCcccccccceeecCCCCe-Eee
Confidence 112234689998 89999883 3337999999762 1 11111112233357999999984 554
Q ss_pred e---cCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 204 S---AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 204 ~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
- +.|+.|.+|.-+.... ......+.....+|..++|+.++..|++..+ ......|++|-+
T Consensus 259 iq~~~sd~~IvffErNGL~h------------g~f~l~~p~de~~ve~L~Wns~sdiLAv~~~-----~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 259 IQCKTSDSDIVFFERNGLRH------------GEFVLPFPLDEKEVEELAWNSNSDILAVVTS-----NLENSLVQLWTT 321 (1265)
T ss_pred eeecCCCCcEEEEecCCccc------------cccccCCcccccchheeeecCCCCceeeeec-----ccccceEEEEEe
Confidence 3 2456788888654111 1111122223344899999998876554221 223345999999
Q ss_pred ccc
Q 021657 281 SDL 283 (309)
Q Consensus 281 ~~~ 283 (309)
.++
T Consensus 322 ~Ny 324 (1265)
T KOG1920|consen 322 GNY 324 (1265)
T ss_pred cCe
Confidence 864
No 328
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.22 E-value=7.6e-05 Score=62.75 Aligned_cols=160 Identities=11% Similarity=0.120 Sum_probs=103.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.=-+++..+++++.|+.-|.+.+|+-..+... .....+.
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~---------------------------------------~~~~~~~ 75 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMR---------------------------------------KLKNEGA 75 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhhh---------------------------------------cccccCc
Confidence 4555577778999999999999999996543111 1111123
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE----eeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV----EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
.+.+..+..+++. .++|.|+..|.|.++-+.....+.... -+.|...|++++|++ ++..+++|...|+|..-.+
T Consensus 76 ~~~~~~~~vs~~e-~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~-~~~k~ysGD~~Gkv~~~~L 153 (726)
T KOG3621|consen 76 TGITCVRSVSSVE-YLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSK-NGMKLYSGDSQGKVVLTEL 153 (726)
T ss_pred cceEEEEEecchh-HhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecc-cccEEeecCCCceEEEEEe
Confidence 4455666777776 889999999999999887643222111 123678999999999 9999999999999998777
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
..... .....+.+-...+.|-.+.... .+||++... ...++++..
T Consensus 154 ~s~~~--~~~~~q~il~~ds~IVQlD~~q--~~LLVStl~--r~~Lc~tE~ 198 (726)
T KOG3621|consen 154 DSRQA--FLSKSQEILSEDSEIVQLDYLQ--SYLLVSTLT--RCILCQTEA 198 (726)
T ss_pred chhhh--hccccceeeccCcceEEeeccc--ceehHhhhh--hhheeecch
Confidence 65100 0223333444456776666543 335544332 233455443
No 329
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.20 E-value=2.6e-06 Score=44.06 Aligned_cols=35 Identities=29% Similarity=0.610 Sum_probs=31.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEe
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWS 37 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd 37 (309)
..+.+|.. .|+++.|++++.++++++.|+.+++|+
T Consensus 6 ~~~~~~~~-~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 6 KTLKGHTG-PVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEecCC-ceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45678888 899999999999999999999999996
No 330
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.19 E-value=0.00021 Score=46.05 Aligned_cols=103 Identities=11% Similarity=0.153 Sum_probs=70.7
Q ss_pred eEEEEEe---cCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 94 VEDVTFC---PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 94 v~~~~~~---~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
|++|++. .+|.+.|+.|+.|..|++|+-. + ....+. ..+.|++++-.. ...|+.+..+|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e--~~~Ei~-e~~~v~~L~~~~--~~~F~Y~l~NGTVGvY~~~~-- 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--E--IVAEIT-ETDKVTSLCSLG--GGRFAYALANGTVGVYDRSQ-- 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--c--EEEEEe-cccceEEEEEcC--CCEEEEEecCCEEEEEeCcc--
Confidence 5566554 4566889999999999999843 3 344443 456788888776 47899999999999998643
Q ss_pred CCCCCCceeeeccCCCCeeEEEEec---CCCcEEEEecCCCcEEE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSP---DKSSVFGSSAEDGLLNI 212 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~dg~i~i 212 (309)
.+.+.+... .+.++++.. ||..-|++|-.+|.|-+
T Consensus 73 ------RlWRiKSK~-~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 73 ------RLWRIKSKN-QVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred ------eeeeeccCC-CeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 455565433 456665543 44444668888988753
No 331
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.15 E-value=0.00053 Score=51.01 Aligned_cols=108 Identities=16% Similarity=0.177 Sum_probs=78.4
Q ss_pred EEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCc
Q 021657 98 TFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177 (309)
Q Consensus 98 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 177 (309)
...++.+.+++.|+..+.+.--|..+++. .....-...+.+-+.- -+++++.|...|.+++.+..+ +..
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~---~We~ilg~RiE~sa~v--vgdfVV~GCy~g~lYfl~~~t------Gs~ 85 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNL---IWEAILGVRIECSAIV--VGDFVVLGCYSGGLYFLCVKT------GSQ 85 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcE---EeehhhCceeeeeeEE--ECCEEEEEEccCcEEEEEecc------hhh
Confidence 34455568899999999999999988872 2222223334333332 367899999999999999999 878
Q ss_pred eeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 178 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+..+.....-=.+....+++. ++..|+.|+..+..|.+.
T Consensus 86 ~w~f~~~~~vk~~a~~d~~~g-lIycgshd~~~yalD~~~ 124 (354)
T KOG4649|consen 86 IWNFVILETVKVRAQCDFDGG-LIYCGSHDGNFYALDPKT 124 (354)
T ss_pred eeeeeehhhhccceEEcCCCc-eEEEecCCCcEEEecccc
Confidence 887765433223345677777 577999999999999988
No 332
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.12 E-value=0.00036 Score=57.58 Aligned_cols=112 Identities=17% Similarity=0.213 Sum_probs=66.0
Q ss_pred EEEEEecCCCcEEEEEcCCCeEEE--EEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-CCCc--EEEEecCCC
Q 021657 95 EDVTFCPSSAQEFCSVGDDSCLIL--WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS-ADNS--VRMFDRRNL 169 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~--i~i~d~~~~ 169 (309)
..-+|+|+|..++++...||...| .|+.... .. .+....+.-..-.|+| +|+.++-.+ ..|. |.++|...
T Consensus 241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~--~~-~Lt~~~gi~~~Ps~sp-dG~~ivf~Sdr~G~p~I~~~~~~g- 315 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN--LP-RLTNGFGINTSPSWSP-DGSKIVFTSDRGGRPQIYLYDLEG- 315 (425)
T ss_pred CCccCCCCCCEEEEEECCCCCccEEEEcCCCCc--ce-ecccCCccccCccCCC-CCCEEEEEeCCCCCcceEEECCCC-
Confidence 455899999888888888887554 5665555 22 2333333334668999 777665554 4554 55555554
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc--EEEEeCCc
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL--LNIWDYEK 217 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~--i~iwd~~~ 217 (309)
.....+......-..-.|+|||++++.....+|. |.+.|+..
T Consensus 316 ------~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 316 ------SQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred ------CceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCC
Confidence 2223333222222267899999987655544555 55555544
No 333
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.10 E-value=0.00089 Score=50.87 Aligned_cols=180 Identities=9% Similarity=0.125 Sum_probs=98.1
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
.+.+-...+..++|+|+.+.++++....+.|...+.. ++ .+.... ......-.+++.. ++.++++--.++.+.++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~--vlr~i~l~g~~D~EgI~y~g-~~~~vl~~Er~~~L~~~ 91 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GK--VLRRIPLDGFGDYEGITYLG-NGRYVLSEERDQRLYIF 91 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT-----EEEEEE-SS-SSEEEEEE-S-TTEEEEEETTTTEEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CC--EEEEEeCCCCCCceeEEEEC-CCEEEEEEcCCCcEEEE
Confidence 3445556799999999876889999999999888874 55 333332 2235677888877 67777766678999999
Q ss_pred ecCCCCCCCCCCceeeec-----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 165 DRRNLTSNGVGSPINKFE-----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
++..............+. .++..+..++|++.+..++ .+-+..-..+|.++........ .. .....+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~-v~kE~~P~~l~~~~~~~~~~~~---~~-~~~~~~~~~ 166 (248)
T PF06977_consen 92 TIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLF-VAKERKPKRLYEVNGFPGGFDL---FV-SDDQDLDDD 166 (248)
T ss_dssp EE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEE-EEEESSSEEEEEEESTT-SS-----EE-EE-HHHH-H
T ss_pred EEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEE-EEeCCCChhhEEEccccCccce---ee-ccccccccc
Confidence 985422110011112221 2445689999999988777 4555656677777641100000 00 000000111
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
......+.+++++|..+.+++-.... ..|..+|..
T Consensus 167 ~~~~~d~S~l~~~p~t~~lliLS~es-------~~l~~~d~~ 201 (248)
T PF06977_consen 167 KLFVRDLSGLSYDPRTGHLLILSDES-------RLLLELDRQ 201 (248)
T ss_dssp T--SS---EEEEETTTTEEEEEETTT-------TEEEEE-TT
T ss_pred cceeccccceEEcCCCCeEEEEECCC-------CeEEEECCC
Confidence 22334578999999888777765554 777777754
No 334
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.09 E-value=0.00027 Score=58.35 Aligned_cols=156 Identities=17% Similarity=0.255 Sum_probs=96.0
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcC--C-CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEcCC
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGD--D-SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGSAD 158 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d 158 (309)
....+..-...+..-.|+|++..+....-. . ..+.++|+.+++.+.+..+.++ -..-+|+| +++.+ ++...|
T Consensus 184 ~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~---~~~P~fsp-DG~~l~f~~~rd 259 (425)
T COG0823 184 NQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGN---NGAPAFSP-DGSKLAFSSSRD 259 (425)
T ss_pred ceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCc---cCCccCCC-CCCEEEEEECCC
Confidence 334444445667778899998554333222 2 4599999999886555554443 34568999 66654 455567
Q ss_pred Cc--EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 159 NS--VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 159 g~--i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|. |+++|+.. .. +..+....+.-..=.|+|||++++.+.+..|.-.||-+...+.... .
T Consensus 260 g~~~iy~~dl~~------~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~------------r 320 (425)
T COG0823 260 GSPDIYLMDLDG------KN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT------------R 320 (425)
T ss_pred CCccEEEEcCCC------Cc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee------------E
Confidence 65 55667765 33 3334433333335679999999888888888877777665333211 1
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEec
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s 263 (309)
.+..+-. -..-.|+|++.+++....
T Consensus 321 iT~~~~~--~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 321 LTFSGGG--NSNPVWSPDGDKIVFESS 345 (425)
T ss_pred eeccCCC--CcCccCCCCCCEEEEEec
Confidence 1122211 126779999998776553
No 335
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.09 E-value=2.7e-05 Score=64.49 Aligned_cols=94 Identities=14% Similarity=0.298 Sum_probs=75.9
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCcee-EEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH-CVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
...|.-+.|+|.- .++|.+..+|.|.+..++-.+ +-.+.-+..+++ +++|.| +|+.+++|-.||+|++.|..+
T Consensus 20 ~~~i~~~ewnP~~-dLiA~~t~~gelli~R~n~qR---lwtip~p~~~v~~sL~W~~-DGkllaVg~kdG~I~L~Dve~- 93 (665)
T KOG4640|consen 20 PINIKRIEWNPKM-DLIATRTEKGELLIHRLNWQR---LWTIPIPGENVTASLCWRP-DGKLLAVGFKDGTIRLHDVEK- 93 (665)
T ss_pred ccceEEEEEcCcc-chhheeccCCcEEEEEeccce---eEeccCCCCccceeeeecC-CCCEEEEEecCCeEEEEEccC-
Confidence 4568889999987 789999999999999987333 566665667777 999999 999999999999999999998
Q ss_pred CCCCCCCceeee-ccCCCCeeEEEEec
Q 021657 170 TSNGVGSPINKF-EGHSAAVLCVQWSP 195 (309)
Q Consensus 170 ~~~~~~~~~~~~-~~~~~~v~~~~~~~ 195 (309)
+..+..+ ......|.++-|.+
T Consensus 94 -----~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 94 -----GGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred -----CCceeccccccccchheeeccc
Confidence 6655552 23456788888874
No 336
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.07 E-value=4.9e-05 Score=63.85 Aligned_cols=121 Identities=12% Similarity=0.173 Sum_probs=86.3
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..|.=-++...+ .+++.|+.-|.+++|+-..+.. ......+....+.....++ +..++|+|+..|.|.++-+.....
T Consensus 34 ~~v~lTc~dst~-~~l~~GsS~G~lyl~~R~~~~~-~~~~~~~~~~~~~~~~vs~-~e~lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 34 ARVKLTCVDATE-EYLAMGSSAGSVYLYNRHTGEM-RKLKNEGATGITCVRSVSS-VEYLVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred ceEEEEEeecCC-ceEEEecccceEEEEecCchhh-hcccccCccceEEEEEecc-hhHhhhhhcCCceEEeehhhccCC
Confidence 334434455555 7899999999999999776663 2222223445566777888 889999999999999998877321
Q ss_pred CCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 172 NGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 172 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+....+..+ +.|+..|++++|++++..++ +|...|.|.+-.+..
T Consensus 111 -~~~~~~t~~d~~~~~rVTal~Ws~~~~k~y-sGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 111 -RDLDYVTPCDKSHKCRVTALEWSKNGMKLY-SGDSQGKVVLTELDS 155 (726)
T ss_pred -CcceeeccccccCCceEEEEEecccccEEe-ecCCCceEEEEEech
Confidence 112222222 23678899999999999865 999999999887776
No 337
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=0.0053 Score=50.51 Aligned_cols=155 Identities=15% Similarity=0.149 Sum_probs=101.3
Q ss_pred CeEEEEEecCCCcEEEEEc--CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE-cCCCcEEEEecCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVG--DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG-SADNSVRMFDRRNL 169 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~ 169 (309)
....++++++++...++-. .++++.+.|..+.+ ..........+ ..++++| +++.+... ..++.|.++|...
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~--~~~~~~vG~~P-~~~a~~p-~g~~vyv~~~~~~~v~vi~~~~- 191 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK--VTATIPVGNTP-TGVAVDP-DGNKVYVTNSDDNTVSVIDTSG- 191 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeCCCCe--EEEEEecCCCc-ceEEECC-CCCeEEEEecCCCeEEEEeCCC-
Confidence 4567899999866666555 37889999987777 44444333344 8999999 88755554 4789999999776
Q ss_pred CCCCCCCcee-----eeccCCCCeeEEEEecCCCcEEEEecCC--CcEEEEeCCcccccccCCCCCcCCCCceeee--ec
Q 021657 170 TSNGVGSPIN-----KFEGHSAAVLCVQWSPDKSSVFGSSAED--GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ--HA 240 (309)
Q Consensus 170 ~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~ 240 (309)
....+ ... .......+.++|+|.+++++...+ +.+...|..... .... ..
T Consensus 192 -----~~v~~~~~~~~~~-~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~---------------v~~~~~~~ 250 (381)
T COG3391 192 -----NSVVRGSVGSLVG-VGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGN---------------VTATDLPV 250 (381)
T ss_pred -----cceeccccccccc-cCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCce---------------EEEecccc
Confidence 32221 122 223346789999999877666555 588888877611 1111 11
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.. ....+..+|++.++.+.-+.. +.+.+-|..
T Consensus 251 ~~~-~~~~v~~~p~g~~~yv~~~~~-------~~V~vid~~ 283 (381)
T COG3391 251 GSG-APRGVAVDPAGKAAYVANSQG-------GTVSVIDGA 283 (381)
T ss_pred ccC-CCCceeECCCCCEEEEEecCC-------CeEEEEeCC
Confidence 111 346678899998877654443 678888877
No 338
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.02 E-value=0.00076 Score=55.84 Aligned_cols=181 Identities=14% Similarity=0.054 Sum_probs=95.4
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCccccccC--CCCceeecCCCCCCCCcccCCCCCcCcccccccccCCe----
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAG--SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTV---- 94 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---- 94 (309)
+..++.++.+|.+..+|.+++............... .......+ ...++.+..++..+++.+.........+
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v--~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~ 197 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLV--HTSNGMLQALNESDGAVKWTVNLDVPSLTLRG 197 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEE--ECCCCEEEEEEccCCCEeeeecCCCCcccccC
Confidence 456777888999999999888655544332211100 00111111 2334556666766666654443211100
Q ss_pred -EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC--Cc---eeEEEecc-CCCCeEEEEcCCCcEEEEecC
Q 021657 95 -EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD--AD---LHCVDWNP-LDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 95 -~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~---v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~ 167 (309)
.+-... ++ .++.++.+|.+...|..+++..-........ .. ...+..+| ..+..++.++.+|.+..+|..
T Consensus 198 ~~sP~v~-~~--~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~ 274 (394)
T PRK11138 198 ESAPATA-FG--GAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLR 274 (394)
T ss_pred CCCCEEE-CC--EEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECC
Confidence 011111 22 4666778899999998887631111111000 00 00111111 024566667789999999999
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+ ++.+.+.... ....+.. .+..++ .++.+|.+..+|..+
T Consensus 275 t------G~~~W~~~~~--~~~~~~~--~~~~vy-~~~~~g~l~ald~~t 313 (394)
T PRK11138 275 S------GQIVWKREYG--SVNDFAV--DGGRIY-LVDQNDRVYALDTRG 313 (394)
T ss_pred C------CCEEEeecCC--CccCcEE--ECCEEE-EEcCCCeEEEEECCC
Confidence 8 7766654321 1122222 344455 667789999999876
No 339
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.00 E-value=0.0035 Score=47.70 Aligned_cols=196 Identities=13% Similarity=0.154 Sum_probs=105.1
Q ss_pred ccCCCCCcceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.|.+-.. .+..|+|+|+.. ++++....+.|...+.+..
T Consensus 16 ~l~g~~~-e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~---------------------------------------- 54 (248)
T PF06977_consen 16 PLPGILD-ELSGLTYNPDTGTLFAVQDEPGEIYELSLDGK---------------------------------------- 54 (248)
T ss_dssp E-TT--S--EEEEEEETTTTEEEEEETTTTEEEEEETT------------------------------------------
T ss_pred ECCCccC-CccccEEcCCCCeEEEEECCCCEEEEEcCCCC----------------------------------------
Confidence 4555555 589999999755 6667778888877776421
Q ss_pred Ccccc--cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--e--EEEe-----eccCCceeEEEeccCCCC
Q 021657 82 GPRGI--YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--V--IKVE-----KAHDADLHCVDWNPLDDN 150 (309)
Q Consensus 82 ~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~--~~~~-----~~~~~~v~~~~~~~~~~~ 150 (309)
.+.. +.+ .+....|++..++ .++++.-.++.+.++++...... . ...+ ..+...+-.++|+| .++
T Consensus 55 -vlr~i~l~g-~~D~EgI~y~g~~-~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~-~~~ 130 (248)
T PF06977_consen 55 -VLRRIPLDG-FGDYEGITYLGNG-RYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDP-KTN 130 (248)
T ss_dssp -EEEEEE-SS--SSEEEEEE-STT-EEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEET-TTT
T ss_pred -EEEEEeCCC-CCCceeEEEECCC-EEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcC-CCC
Confidence 1111 222 3467888998776 66666667899999998443211 1 1111 12445689999999 666
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCcee--e------eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccc
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPIN--K------FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~------~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
.|+++-...-..+|.++.... ...+. . ....-..+.+++++|...++++....+..|..+|... +..
T Consensus 131 ~L~v~kE~~P~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G--~~~ 205 (248)
T PF06977_consen 131 RLFVAKERKPKRLYEVNGFPG---GFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQG--RVV 205 (248)
T ss_dssp EEEEEEESSSEEEEEEESTT----SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT----EE
T ss_pred EEEEEeCCCChhhEEEccccC---ccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCCC--CEE
Confidence 666666666666776653110 11111 1 1122345789999999888888888899999999543 221
Q ss_pred cCCCCCcCCCCceeeeecC-------CCcceeeEEEccCCCeEEE
Q 021657 223 EQGPRTTNYPAGLFFQHAG-------HRDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~ 260 (309)
. ...+.. .-...-.|+|.++|..+++
T Consensus 206 ~------------~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv 238 (248)
T PF06977_consen 206 S------------SLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV 238 (248)
T ss_dssp E------------EEE-STTGGG-SS---SEEEEEE-TT--EEEE
T ss_pred E------------EEEeCCcccCcccccCCccEEEECCCCCEEEE
Confidence 1 111111 1124578999998765443
No 340
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.99 E-value=0.00079 Score=43.45 Aligned_cols=68 Identities=18% Similarity=0.306 Sum_probs=50.5
Q ss_pred eeEEEeccCC---CCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 139 LHCVDWNPLD---DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 139 v~~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
|++|++...+ .+.|++|+.|..||+|+-. ..+.++.. ...|++++-...++ |+-+..+|+|-+|+-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--------e~~~Ei~e-~~~v~~L~~~~~~~--F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--------EIVAEITE-TDKVTSLCSLGGGR--FAYALANGTVGVYDR 70 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--------cEEEEEec-ccceEEEEEcCCCE--EEEEecCCEEEEEeC
Confidence 5667665433 3689999999999999854 35666664 45677887777665 568888999999986
Q ss_pred Cc
Q 021657 216 EK 217 (309)
Q Consensus 216 ~~ 217 (309)
..
T Consensus 71 ~~ 72 (111)
T PF14783_consen 71 SQ 72 (111)
T ss_pred cc
Confidence 54
No 341
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.98 E-value=0.0011 Score=54.83 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=59.8
Q ss_pred EEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCC
Q 021657 106 EFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS 185 (309)
Q Consensus 106 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 185 (309)
.++.++.+|.+..+|..+++. .-... . .....+.. .+..++.++.+|.+..+|..+ ++.+.+.....
T Consensus 258 ~vy~~~~~g~l~ald~~tG~~--~W~~~-~-~~~~~~~~---~~~~vy~~~~~g~l~ald~~t------G~~~W~~~~~~ 324 (394)
T PRK11138 258 VVYALAYNGNLVALDLRSGQI--VWKRE-Y-GSVNDFAV---DGGRIYLVDQNDRVYALDTRG------GVELWSQSDLL 324 (394)
T ss_pred EEEEEEcCCeEEEEECCCCCE--EEeec-C-CCccCcEE---ECCEEEEEcCCCeEEEEECCC------CcEEEcccccC
Confidence 466667889999999998872 22211 1 11112222 456777788899999999988 76665443211
Q ss_pred -CCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 186 -AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 186 -~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
....+..+. +.++ ..++.||.+.+.|..+
T Consensus 325 ~~~~~sp~v~--~g~l-~v~~~~G~l~~ld~~t 354 (394)
T PRK11138 325 HRLLTAPVLY--NGYL-VVGDSEGYLHWINRED 354 (394)
T ss_pred CCcccCCEEE--CCEE-EEEeCCCEEEEEECCC
Confidence 112222222 3334 4788899999999877
No 342
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=7.4e-05 Score=62.02 Aligned_cols=75 Identities=21% Similarity=0.408 Sum_probs=64.9
Q ss_pred CCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCee-EEEEecCCCcEEEEecCCCcEEEEe
Q 021657 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVL-CVQWSPDKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 136 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~dg~i~iwd 214 (309)
...+.-+.|+| .-.++|.+..+|.+.+..+. .+.+.++.-+...++ +++|.|||+ ++|.|-.||+|++-|
T Consensus 20 ~~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-------~qRlwtip~p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~D 90 (665)
T KOG4640|consen 20 PINIKRIEWNP-KMDLIATRTEKGELLIHRLN-------WQRLWTIPIPGENVTASLCWRPDGK-LLAVGFKDGTIRLHD 90 (665)
T ss_pred ccceEEEEEcC-ccchhheeccCCcEEEEEec-------cceeEeccCCCCccceeeeecCCCC-EEEEEecCCeEEEEE
Confidence 45678899999 99999999999999998877 567888886666666 999999999 689999999999999
Q ss_pred CCccc
Q 021657 215 YEKVG 219 (309)
Q Consensus 215 ~~~~~ 219 (309)
+.+..
T Consensus 91 ve~~~ 95 (665)
T KOG4640|consen 91 VEKGG 95 (665)
T ss_pred ccCCC
Confidence 99843
No 343
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.95 E-value=0.0043 Score=46.93 Aligned_cols=167 Identities=16% Similarity=0.198 Sum_probs=97.2
Q ss_pred EEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe---eccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCC
Q 021657 97 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE---KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNG 173 (309)
Q Consensus 97 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 173 (309)
++.+.+| ++||. -.|..|.|-..+..-..++... +.....=+.++|+| ++.+||.+...|+|++||+-.
T Consensus 3 ~~~~~~G-k~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSp-D~tlLa~a~S~G~i~vfdl~g----- 74 (282)
T PF15492_consen 3 LALSSDG-KLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSP-DCTLLAYAESTGTIRVFDLMG----- 74 (282)
T ss_pred eeecCCC-cEEEE-EeccEEEEEeccCCchheeEEEecCCCCCchheEEEECC-CCcEEEEEcCCCeEEEEeccc-----
Confidence 4556677 55554 4677788876654332222222 22233467899999 999999999999999999873
Q ss_pred CCCceeeecc-------CCCCeeEEEEecCC-----CcEEEEecCCCcEEEEeCCcc-cccccCCCCCcCCCCceeeeec
Q 021657 174 VGSPINKFEG-------HSAAVLCVQWSPDK-----SSVFGSSAEDGLLNIWDYEKV-GKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 174 ~~~~~~~~~~-------~~~~v~~~~~~~~~-----~~l~~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
..+..+.. ....|..|.|.+.. .+.|.+-...|.++=|-+... .+... ..-.+.+.
T Consensus 75 --~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~---------e~hsfsf~ 143 (282)
T PF15492_consen 75 --SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQ---------ENHSFSFS 143 (282)
T ss_pred --ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcce---------eeEEEEec
Confidence 33333322 13456667675432 112334455777777766320 11111 11223333
Q ss_pred C-CCcceeeEEEccCCCeEEEEecCCC---CCCCCCCeEEEEEccc
Q 021657 241 G-HRDKVVDFHWNASDPWTVVSVSDDC---DSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~-~~~~v~~~~~~~~~~~~~~s~s~d~---~s~~~dg~v~vw~~~~ 282 (309)
. +...|.++.++|..+.|+++|...- .+...+--+.-|++-+
T Consensus 144 ~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~ 189 (282)
T PF15492_consen 144 SHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILS 189 (282)
T ss_pred ccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcC
Confidence 3 3678999999997776666655431 0111234678888764
No 344
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.92 E-value=2.3e-05 Score=40.27 Aligned_cols=37 Identities=32% Similarity=0.610 Sum_probs=31.9
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 120 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd 120 (309)
+...+..|...|.++.|.+.+ .++++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDG-KYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCC-CEEEEecCCCeEEEcC
Confidence 345566788999999999987 7899999999999996
No 345
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.89 E-value=0.0043 Score=51.66 Aligned_cols=224 Identities=12% Similarity=0.082 Sum_probs=100.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
....+.++|+|++++. ..||.-.|+.................... ......... ...+.++...+......+..
T Consensus 34 ~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~G~g~~~vw~~-~n~yAv~~~---~~~I~I~kn~~~~~~k~i~~- 107 (443)
T PF04053_consen 34 YPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAFGSGLSFVWSS-RNRYAVLES---SSTIKIYKNFKNEVVKSIKL- 107 (443)
T ss_dssp --SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEEEE-SEEEE-T-SSEEEEE-T---TS-EEEEETTEE-TT------
T ss_pred CCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccccCceeEEEEec-CccEEEEEC---CCeEEEEEcCccccceEEcC-
Confidence 3578999999999888 45778888874333222222121222222 222222211 22233321112112112211
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC-
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL- 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~- 169 (309)
...+..+-. | .+|...+.+ .|.+||+.+++ .+..... .+|..+.|++ ++.+++..+.+ .+.+++....
T Consensus 108 ~~~~~~If~---G-~LL~~~~~~-~i~~yDw~~~~--~i~~i~v--~~vk~V~Ws~-~g~~val~t~~-~i~il~~~~~~ 176 (443)
T PF04053_consen 108 PFSVEKIFG---G-NLLGVKSSD-FICFYDWETGK--LIRRIDV--SAVKYVIWSD-DGELVALVTKD-SIYILKYNLEA 176 (443)
T ss_dssp SS-EEEEE----S-SSEEEEETT-EEEEE-TTT----EEEEESS---E-EEEEE-T-TSSEEEEE-S--SEEEEEE-HHH
T ss_pred CcccceEEc---C-cEEEEECCC-CEEEEEhhHcc--eeeEEec--CCCcEEEEEC-CCCEEEEEeCC-eEEEEEecchh
Confidence 112343432 5 666666554 89999999887 5666543 3489999999 89999888755 6777765431
Q ss_pred ----CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcc
Q 021657 170 ----TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDK 245 (309)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
...+.......+..-...|.+.+|..+ - ++.+.. + .++.+--.. ...+..-..+
T Consensus 177 ~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~-fiYtT~-~-~lkYl~~Ge------------------~~~i~~ld~~ 234 (443)
T PF04053_consen 177 VAAIPEEGVEDAFELIHEISERIKSGCWVED-C-FIYTTS-N-HLKYLVNGE------------------TGIIAHLDKP 234 (443)
T ss_dssp HHHBTTTB-GGGEEEEEEE-S--SEEEEETT-E-EEEE-T-T-EEEEEETTE------------------EEEEEE-SS-
T ss_pred cccccccCchhceEEEEEecceeEEEEEEcC-E-EEEEcC-C-eEEEEEcCC------------------cceEEEcCCc
Confidence 000001133334333567889999887 3 333333 3 666522111 1222222345
Q ss_pred eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 246 VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 246 v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.=+...|..+.++ ....|+.+..+.+.
T Consensus 235 ~yllgy~~~~~~ly--------~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 235 LYLLGYLPKENRLY--------LIDRDGNVISYELD 262 (443)
T ss_dssp -EEEEEETTTTEEE--------EE-TT--EEEEE--
T ss_pred eEEEEEEccCCEEE--------EEECCCCEEEEEEC
Confidence 66666667555555 23344788888776
No 346
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.86 E-value=0.0041 Score=48.95 Aligned_cols=246 Identities=12% Similarity=0.128 Sum_probs=122.6
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEeCCcccccccc--CCc---------cccccCCCCceeecCCCCCCCC
Q 021657 14 ALAMCPTEPYVLSGG----------KDKSVVLWSIQDHITSSAT--DPA---------TAKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~----------~dg~i~vwd~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.+..+|+++.+.+++ ..-.|.+||.++.....+. .+. .............+........
T Consensus 40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~S 119 (342)
T PF06433_consen 40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATS 119 (342)
T ss_dssp EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEE
T ss_pred ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCe
Confidence 466899999887643 2346899999876222211 111 1112222222333333333444
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE---eeccCCce-eEEEeccCC
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV---EKAHDADL-HCVDWNPLD 148 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v-~~~~~~~~~ 148 (309)
+.+.|....+.+..+.-. + |....|.++.-|.+-|.||.+.-..+....++.... +.....++ ..-++.. .
T Consensus 120 VtVVDl~~~kvv~ei~~P-G---C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~-~ 194 (342)
T PF06433_consen 120 VTVVDLAAKKVVGEIDTP-G---CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSR-D 194 (342)
T ss_dssp EEEEETTTTEEEEEEEGT-S---EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEET-T
T ss_pred EEEEECCCCceeeeecCC-C---EEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceEC-C
Confidence 555555555554433311 1 222335554568889999999999987443222111 11222222 2333444 4
Q ss_pred CCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc----------CCCCeeEEEEecCCCcEEEEec-------CCC--c
Q 021657 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG----------HSAAVLCVQWSPDKSSVFGSSA-------EDG--L 209 (309)
Q Consensus 149 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~-------~dg--~ 209 (309)
+..++--+.+|.|+-.|+.... -+....+.. ..+.-.-+++++....|++.-- .|+ .
T Consensus 195 ~~~~~F~Sy~G~v~~~dlsg~~----~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgte 270 (342)
T PF06433_consen 195 GGRLYFVSYEGNVYSADLSGDS----AKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTE 270 (342)
T ss_dssp TTEEEEEBTTSEEEEEEETTSS----EEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEE
T ss_pred CCeEEEEecCCEEEEEeccCCc----ccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceE
Confidence 4455556789999998887632 111122211 1123345677765554543321 122 2
Q ss_pred EEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC-eEEEEecCCCCCCCCCCeEEEEEccccccCCh
Q 021657 210 LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP-WTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQ 288 (309)
Q Consensus 210 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~ 288 (309)
|.+||+.+ .+.+..+.- ..++.+|..+.+.. .|++....+ +.|.+||.. +
T Consensus 271 VWv~D~~t---------------~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~-------~~l~v~D~~------t 321 (342)
T PF06433_consen 271 VWVYDLKT---------------HKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGD-------GTLDVYDAA------T 321 (342)
T ss_dssp EEEEETTT---------------TEEEEEEEE-EEEESEEEEESSSS-EEEEEETTT-------TEEEEEETT------T
T ss_pred EEEEECCC---------------CeEEEEEeC-CCccceEEEccCCCcEEEEEcCCC-------CeEEEEeCc------C
Confidence 55555555 223333332 24577888888765 444433334 899999999 6
Q ss_pred hhHhHhhhc
Q 021657 289 DEVLAELEK 297 (309)
Q Consensus 289 ~~~~~~~~~ 297 (309)
++.+.++++
T Consensus 322 Gk~~~~~~~ 330 (342)
T PF06433_consen 322 GKLVRSIEQ 330 (342)
T ss_dssp --EEEEE--
T ss_pred CcEEeehhc
Confidence 777776654
No 347
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.85 E-value=0.0037 Score=51.29 Aligned_cols=203 Identities=9% Similarity=0.046 Sum_probs=100.9
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
++...+ +|++++.| |=-++|.|..+|.+.|-|++.+..........
T Consensus 82 ~~~~~g-~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~-------------------------------- 127 (395)
T PF08596_consen 82 LDAKQG-PVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRE-------------------------------- 127 (395)
T ss_dssp E---S--SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--------------------------------
T ss_pred eeccCC-cEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccc--------------------------------
Confidence 344556 89999998 44599999999999999998763332211100
Q ss_pred ccccccccCCeEEEEEec----CC---CcEEEEEcCCCeEEEEEcCC---CCcc--eEEEeeccCCceeEEE-eccCC--
Q 021657 84 RGIYNGHEDTVEDVTFCP----SS---AQEFCSVGDDSCLILWDARV---GTSP--VIKVEKAHDADLHCVD-WNPLD-- 148 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~----~~---~~~l~s~~~dg~i~iwd~~~---~~~~--~~~~~~~~~~~v~~~~-~~~~~-- 148 (309)
...-......|+++.|.- ++ .-++++|.+.|.+.+|.+.- +... .......+.++|..+. ++..+
T Consensus 128 ~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~ 207 (395)
T PF08596_consen 128 SFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGE 207 (395)
T ss_dssp --T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--
T ss_pred cccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCC
Confidence 001112345677888862 11 14688889999999998741 1110 1111124556666555 32100
Q ss_pred -----------------CCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEe----cCCCcEEEEecCC
Q 021657 149 -----------------DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS----PDKSSVFGSSAED 207 (309)
Q Consensus 149 -----------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~~d 207 (309)
-..++....+..++++...+ .+..++.....-....+.+- ..+...|++-..+
T Consensus 208 ~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~------~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~ 281 (395)
T PF08596_consen 208 SALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPK------SKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNN 281 (395)
T ss_dssp B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETT
T ss_pred cccCchhHhhccccCCCcCcEEEEEcccceEEEeCCC------CcccceeeccccccceEEEEeecccCCceEEEEEECC
Confidence 11234444577899999887 55554444222233344453 1233356677889
Q ss_pred CcEEEEeCCcccccccCCCCCcCCCCceeeeecC----CCcceeeEEEccCCCeEEEE
Q 021657 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG----HRDKVVDFHWNASDPWTVVS 261 (309)
Q Consensus 208 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s 261 (309)
|.+++|.+...++. ....- +...+....++++|+.++.+
T Consensus 282 G~i~i~SLP~Lkei---------------~~~~l~~~~d~~~~~~ssis~~Gdi~~~~ 324 (395)
T PF08596_consen 282 GSIRIYSLPSLKEI---------------KSVSLPPPLDSRRLSSSSISRNGDIFYWT 324 (395)
T ss_dssp SEEEEEETTT--EE---------------EEEE-SS---HHHHTT-EE-TTS-EEEE-
T ss_pred CcEEEEECCCchHh---------------hcccCCCccccccccccEECCCCCEEEEe
Confidence 99999999873332 22222 22356677788888865544
No 348
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.82 E-value=0.0017 Score=55.25 Aligned_cols=86 Identities=9% Similarity=0.087 Sum_probs=55.0
Q ss_pred CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecC
Q 021657 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 185 ~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 264 (309)
......++++|||+++++++..+..+.|+|+.+......... ......+.+.. -...-...+|.+++. .+.|..-
T Consensus 320 GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~---~~~~~vvaeve-vGlGPLHTaFDg~G~-aytslf~ 394 (635)
T PRK02888 320 PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKI---KPRDAVVAEPE-LGLGPLHTAFDGRGN-AYTTLFL 394 (635)
T ss_pred CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccC---CccceEEEeec-cCCCcceEEECCCCC-EEEeEee
Confidence 344567999999999999999999999999988543221110 00011111111 123345677888765 5554444
Q ss_pred CCCCCCCCCeEEEEEccc
Q 021657 265 DCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 265 d~~s~~~dg~v~vw~~~~ 282 (309)
| ..|..|++..
T Consensus 395 d-------sqv~kwn~~~ 405 (635)
T PRK02888 395 D-------SQIVKWNIEA 405 (635)
T ss_pred c-------ceeEEEehHH
Confidence 4 8999999984
No 349
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.77 E-value=0.011 Score=48.73 Aligned_cols=162 Identities=14% Similarity=0.170 Sum_probs=109.3
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC---CCcEEEEecCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA---DNSVRMFDRRNLT 170 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~ 170 (309)
-..+..++.+.+.+++...+..|.+.|....+ ......-. .....++++| ++..+.++.. ++.+.+.|..+
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~--~~~~~~vG-~~P~~~~~~~-~~~~vYV~n~~~~~~~vsvid~~t-- 149 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNT--VLGSIPVG-LGPVGLAVDP-DGKYVYVANAGNGNNTVSVIDAAT-- 149 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccc--eeeEeeec-cCCceEEECC-CCCEEEEEecccCCceEEEEeCCC--
Confidence 45678888886677787778999999977666 33333222 2667899999 6655555544 68899999888
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
.+.+.+......+ ..+++.|+|..++++-..++.|.+.|........ . .......-...-..+.
T Consensus 150 ----~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~----------~~~~~~~~~~~P~~i~ 213 (381)
T COG3391 150 ----NKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-G----------SVGSLVGVGTGPAGIA 213 (381)
T ss_pred ----CeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-c----------ccccccccCCCCceEE
Confidence 6777765544444 8899999999888777789999999976621110 0 0000111223347788
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++|++.++.++...+ .++.+...|...
T Consensus 214 v~~~g~~~yV~~~~~-----~~~~v~~id~~~ 240 (381)
T COG3391 214 VDPDGNRVYVANDGS-----GSNNVLKIDTAT 240 (381)
T ss_pred ECCCCCEEEEEeccC-----CCceEEEEeCCC
Confidence 999999777755332 246788887774
No 350
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.77 E-value=0.0097 Score=45.43 Aligned_cols=101 Identities=17% Similarity=0.150 Sum_probs=63.7
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeee-cc
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF-EG 183 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~ 183 (309)
..+++++.++.|..||..+++ ..-.... ...+...... .+..++++..++.++.+|..+ ++.+.+. ..
T Consensus 37 ~~v~~~~~~~~l~~~d~~tG~--~~W~~~~-~~~~~~~~~~--~~~~v~v~~~~~~l~~~d~~t------G~~~W~~~~~ 105 (238)
T PF13360_consen 37 GRVYVASGDGNLYALDAKTGK--VLWRFDL-PGPISGAPVV--DGGRVYVGTSDGSLYALDAKT------GKVLWSIYLT 105 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSE--EEEEEEC-SSCGGSGEEE--ETTEEEEEETTSEEEEEETTT------SCEEEEEEE-
T ss_pred CEEEEEcCCCEEEEEECCCCC--EEEEeec-cccccceeee--cccccccccceeeeEecccCC------cceeeeeccc
Confidence 456666899999999998988 4433333 2222222222 456666667888999999998 8888874 32
Q ss_pred CC---CCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 184 HS---AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 184 ~~---~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.. ..........++..+ +.+..++.|..+|.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~l~~~d~~t 141 (238)
T PF13360_consen 106 SSPPAGVRSSSSPAVDGDRL-YVGTSSGKLVALDPKT 141 (238)
T ss_dssp SSCTCSTB--SEEEEETTEE-EEEETCSEEEEEETTT
T ss_pred cccccccccccCceEecCEE-EEEeccCcEEEEecCC
Confidence 21 111222333335544 4666699999999987
No 351
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.76 E-value=6.8e-05 Score=64.56 Aligned_cols=112 Identities=15% Similarity=0.345 Sum_probs=83.8
Q ss_pred EEEEEecCCCcEEEEEc----CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 95 EDVTFCPSSAQEFCSVG----DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
+-..|+|.. .+|+.++ ..|.|.||- .+++. ... ..-+-.+++++|+| ..-.|+.|-.-|.+.+|...+
T Consensus 19 ti~SWHPse-PlfAVA~fS~er~GSVtIfa-dtGEP--qr~-Vt~P~hatSLCWHp-e~~vLa~gwe~g~~~v~~~~~-- 90 (1416)
T KOG3617|consen 19 TISSWHPSE-PLFAVASFSPERGGSVTIFA-DTGEP--QRD-VTYPVHATSLCWHP-EEFVLAQGWEMGVSDVQKTNT-- 90 (1416)
T ss_pred cccccCCCC-ceeEEEEecCCCCceEEEEe-cCCCC--Ccc-cccceehhhhccCh-HHHHHhhccccceeEEEecCC--
Confidence 345688887 6677665 468888884 45551 111 11233467899999 888999999999999999887
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
.+.-.....|..+|..+.|+++|.. ++++..=|.+.+|.....+
T Consensus 91 ----~e~htv~~th~a~i~~l~wS~~G~~-l~t~d~~g~v~lwr~d~~g 134 (1416)
T KOG3617|consen 91 ----TETHTVVETHPAPIQGLDWSHDGTV-LMTLDNPGSVHLWRYDVIG 134 (1416)
T ss_pred ----ceeeeeccCCCCCceeEEecCCCCe-EEEcCCCceeEEEEeeecc
Confidence 5555555678999999999999996 5599999999999987533
No 352
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.72 E-value=0.0027 Score=54.10 Aligned_cols=100 Identities=17% Similarity=0.236 Sum_probs=68.2
Q ss_pred CCeEEEEEcCC----CCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-CCcEEEEecCCCCCC------CCCCceeee
Q 021657 113 DSCLILWDARV----GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSN------GVGSPINKF 181 (309)
Q Consensus 113 dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~------~~~~~~~~~ 181 (309)
++.|.+.|..+ +. .....+ .-......+.++| +++++++++. +.++.|+|+.+.... .....+.+.
T Consensus 295 gn~V~VID~~t~~~~~~-~v~~yI-PVGKsPHGV~vSP-DGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaev 371 (635)
T PRK02888 295 GSKVPVVDGRKAANAGS-ALTRYV-PVPKNPHGVNTSP-DGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEP 371 (635)
T ss_pred CCEEEEEECCccccCCc-ceEEEE-ECCCCccceEECC-CCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEee
Confidence 57899999887 22 133333 3456678999999 8887766655 899999999883210 001123333
Q ss_pred ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 182 EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 182 ~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
....++ ...+|.++|. .+.+-.-|..|..|++..
T Consensus 372 evGlGP-LHTaFDg~G~-aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 372 ELGLGP-LHTAFDGRGN-AYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ccCCCc-ceEEECCCCC-EEEeEeecceeEEEehHH
Confidence 333333 4678999987 677888999999999986
No 353
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.71 E-value=0.015 Score=47.35 Aligned_cols=155 Identities=14% Similarity=0.182 Sum_probs=87.0
Q ss_pred ccCCeEEEEEecCCCcEEEE-EcCC---CeEEEEEcCCCCcceEEEeeccCC---ceeEEEec-cCCCCeEEEEcCCCcE
Q 021657 90 HEDTVEDVTFCPSSAQEFCS-VGDD---SCLILWDARVGTSPVIKVEKAHDA---DLHCVDWN-PLDDNLILTGSADNSV 161 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s-~~~d---g~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~-~~~~~~l~~~~~dg~i 161 (309)
-...+..+.|.+++..+++. ..++ ..+.+.|..++........ .... .-....+. +.+..++.....+|.-
T Consensus 182 ~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e-~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~ 260 (353)
T PF00930_consen 182 QDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEE-TSDGWVDVYDPPHFLGPDGNEFLWISERDGYR 260 (353)
T ss_dssp SSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEE-ESSSSSSSSSEEEE-TTTSSEEEEEEETTSSE
T ss_pred CccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEe-cCCcceeeecccccccCCCCEEEEEEEcCCCc
Confidence 45578899999998323332 3333 3466778877664333322 2222 22355554 5355666666778866
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeE-EEEecCCCcEEEEecCCC--cEEEEeCCcc-cccccCCCCCcCCCCceee
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLC-VQWSPDKSSVFGSSAEDG--LLNIWDYEKV-GKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~dg--~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~ 237 (309)
+||-+... +.....+....-.|.. +.+++++..++.++..++ .-.+|.+... +. ...
T Consensus 261 hly~~~~~-----~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~--------------~~~ 321 (353)
T PF00930_consen 261 HLYLYDLD-----GGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGG--------------EPK 321 (353)
T ss_dssp EEEEEETT-----SSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETT--------------EEE
T ss_pred EEEEEccc-----ccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCC--------------CeE
Confidence 65544432 3335566655666744 778899887777777633 4455555442 11 112
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecC
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~ 264 (309)
.+......-..+.|+|++.+++.++|.
T Consensus 322 ~LT~~~~~~~~~~~Spdg~y~v~~~s~ 348 (353)
T PF00930_consen 322 CLTCEDGDHYSASFSPDGKYYVDTYSG 348 (353)
T ss_dssp ESSTTSSTTEEEEE-TTSSEEEEEEES
T ss_pred eccCCCCCceEEEECCCCCEEEEEEcC
Confidence 222222222689999999999987764
No 354
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.65 E-value=0.0024 Score=53.12 Aligned_cols=143 Identities=10% Similarity=0.137 Sum_probs=75.9
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE-ecC
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF-DRR 167 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~-d~~ 167 (309)
...-....+.++|+| +.++. +.||...|+.....+ ... .+.-...+|.+ .+ .+|+-...+.|.++ ++.
T Consensus 30 ~~~~~p~~ls~npng-r~v~V-~g~geY~iyt~~~~r--~k~-----~G~g~~~vw~~-~n-~yAv~~~~~~I~I~kn~~ 98 (443)
T PF04053_consen 30 SCEIYPQSLSHNPNG-RFVLV-CGDGEYEIYTALAWR--NKA-----FGSGLSFVWSS-RN-RYAVLESSSTIKIYKNFK 98 (443)
T ss_dssp E-SS--SEEEE-TTS-SEEEE-EETTEEEEEETTTTE--EEE-----EEE-SEEEE-T-SS-EEEEE-TTS-EEEEETTE
T ss_pred CCCcCCeeEEECCCC-CEEEE-EcCCEEEEEEccCCc--ccc-----cCceeEEEEec-Cc-cEEEEECCCeEEEEEcCc
Confidence 344557899999998 65555 567888888843322 111 23456788987 44 46666668889996 333
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
. .....+.. ...+..|-. |.. |...+ ++.|.+||... ...+..... .+|.
T Consensus 99 ~-------~~~k~i~~-~~~~~~If~---G~L-L~~~~-~~~i~~yDw~~---------------~~~i~~i~v--~~vk 148 (443)
T PF04053_consen 99 N-------EVVKSIKL-PFSVEKIFG---GNL-LGVKS-SDFICFYDWET---------------GKLIRRIDV--SAVK 148 (443)
T ss_dssp E--------TT------SS-EEEEE----SSS-EEEEE-TTEEEEE-TTT-----------------EEEEESS---E-E
T ss_pred c-------ccceEEcC-CcccceEEc---CcE-EEEEC-CCCEEEEEhhH---------------cceeeEEec--CCCc
Confidence 2 22223332 123444433 774 54444 45899999997 344444443 2489
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+.|++++.++++.+. ..+.+++.+
T Consensus 149 ~V~Ws~~g~~val~t~---------~~i~il~~~ 173 (443)
T PF04053_consen 149 YVIWSDDGELVALVTK---------DSIYILKYN 173 (443)
T ss_dssp EEEE-TTSSEEEEE-S----------SEEEEEE-
T ss_pred EEEEECCCCEEEEEeC---------CeEEEEEec
Confidence 9999999887665543 378898876
No 355
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.65 E-value=0.0013 Score=53.95 Aligned_cols=143 Identities=18% Similarity=0.204 Sum_probs=98.0
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC-------CeEEEEcCCCcEEEEecCCCCCCCCCCc
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD-------NLILTGSADNSVRMFDRRNLTSNGVGSP 177 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 177 (309)
-+|.++.....++-.|++.++ ++....-+.. |+-+.+.| +. ..-+.|-.+..|.-||+|-.. ...
T Consensus 347 lil~~~~~~~~l~klDIE~GK--IVeEWk~~~d-i~mv~~t~-d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~----~~k 418 (644)
T KOG2395|consen 347 LILMDGGEQDKLYKLDIERGK--IVEEWKFEDD-INMVDITP-DFKFAQLTSEQTLVGLSDNSVFRIDPRVQG----KNK 418 (644)
T ss_pred eEeeCCCCcCcceeeecccce--eeeEeeccCC-cceeeccC-CcchhcccccccEEeecCCceEEecccccC----cce
Confidence 345555566678888999888 7777776665 77777776 32 233556678889999999642 112
Q ss_pred eeeecc----CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEcc
Q 021657 178 INKFEG----HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNA 253 (309)
Q Consensus 178 ~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 253 (309)
+..-++ .+....|.+-..+|. +|+|+.+|.|++||--. ......+.+-..+|..+..+-
T Consensus 419 l~~~q~kqy~~k~nFsc~aTT~sG~--IvvgS~~GdIRLYdri~---------------~~AKTAlPgLG~~I~hVdvta 481 (644)
T KOG2395|consen 419 LAVVQSKQYSTKNNFSCFATTESGY--IVVGSLKGDIRLYDRIG---------------RRAKTALPGLGDAIKHVDVTA 481 (644)
T ss_pred eeeeeccccccccccceeeecCCce--EEEeecCCcEEeehhhh---------------hhhhhcccccCCceeeEEeec
Confidence 222222 234567777777775 67999999999999733 122335677788999999999
Q ss_pred CCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 254 SDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 254 ~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+|.+++++|- ..+.+-++.
T Consensus 482 dGKwil~Tc~---------tyLlLi~t~ 500 (644)
T KOG2395|consen 482 DGKWILATCK---------TYLLLIDTL 500 (644)
T ss_pred cCcEEEEecc---------cEEEEEEEe
Confidence 9999998764 456666654
No 356
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.63 E-value=0.0012 Score=59.11 Aligned_cols=158 Identities=9% Similarity=0.073 Sum_probs=100.1
Q ss_pred ccCCCCCcceEEEEECCCCCEEEE--ecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLS--GGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+++-|..-+|..+...+|+...+. .+.+-.|..||+++-...... +
T Consensus 94 t~~v~k~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~--------------------------------~ 141 (1405)
T KOG3630|consen 94 TFKVEKEIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYE--------------------------------T 141 (1405)
T ss_pred ceeeeccccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhh--------------------------------h
Confidence 445566656667777778766443 333447888998753111100 0
Q ss_pred cCcc---cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 81 VGPR---GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 81 ~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..++ +.......-..++.|+|.=....+.+..|+.|++..+..... .... ..-....++++|+| .|..+++|-.
T Consensus 142 ~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~-~v~s-~p~t~~~Tav~WSp-rGKQl~iG~n 218 (1405)
T KOG3630|consen 142 TVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQ-NVTS-FPVTNSQTAVLWSP-RGKQLFIGRN 218 (1405)
T ss_pred ccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhh-hhcc-cCcccceeeEEecc-ccceeeEecC
Confidence 1111 111222344567889987666788888999999988765442 1222 23456789999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeecc----CCCCeeEEEEecCCCcEEE
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEG----HSAAVLCVQWSPDKSSVFG 202 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~ 202 (309)
.|++.-|...- +....+.+ ....|.+|+|-....++++
T Consensus 219 nGt~vQy~P~l-------eik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 219 NGTEVQYEPSL-------EIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred CCeEEEeeccc-------ceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 99999887652 32333322 1467999999988876543
No 357
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.61 E-value=0.017 Score=45.73 Aligned_cols=111 Identities=12% Similarity=0.180 Sum_probs=62.0
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee----cc-CCceeEEEeccCCCCeEEEEcC-----------
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK----AH-DADLHCVDWNPLDDNLILTGSA----------- 157 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~-~~~v~~~~~~~~~~~~l~~~~~----------- 157 (309)
+.++..-..+ ..|+++.. | +.+++..++.. ...+. +. ....+.....| ++.+.+....
T Consensus 68 ~~~~~~~d~~-g~Lv~~~~-g-~~~~~~~~~~~--~t~~~~~~~~~~~~r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~ 141 (307)
T COG3386 68 FSSGALIDAG-GRLIACEH-G-VRLLDPDTGGK--ITLLAEPEDGLPLNRPNDGVVDP-DGRIWFGDMGYFDLGKSEERP 141 (307)
T ss_pred cccceeecCC-CeEEEEcc-c-cEEEeccCCce--eEEeccccCCCCcCCCCceeEcC-CCCEEEeCCCccccCccccCC
Confidence 3444433333 34555433 3 56677655552 11111 11 13445677778 6665555433
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
-|.++-+|. . +..++.+..+-..-+.|+||||++.++++=+..+.|.-|++..
T Consensus 142 ~G~lyr~~p-~------g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~ 194 (307)
T COG3386 142 TGSLYRVDP-D------GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDP 194 (307)
T ss_pred cceEEEEcC-C------CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCc
Confidence 122333332 2 4444444444556688999999998887777778899888873
No 358
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.52 E-value=0.00025 Score=51.59 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=58.5
Q ss_pred EEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCC
Q 021657 106 EFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS 185 (309)
Q Consensus 106 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 185 (309)
.+...+.||.|+-++++..+.... ...-+... +.... .+..+++|+.+|.|.+|..... +.....+....
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~r-se~~~~e~---~~v~~-~~~~~~vG~~dg~v~~~n~n~~-----g~~~d~~~s~~ 101 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCR-SERFIDEG---QRVVT-ASAKLMVGTSDGAVYVFNWNLE-----GAHSDRVCSGE 101 (238)
T ss_pred hhccccCCcccccchhhhhhhhhh-hhhhhhcc---eeecc-cCceEEeecccceEEEecCCcc-----chHHHhhhccc
Confidence 345557889999888876552111 11112222 11122 5678999999999999987741 22222222222
Q ss_pred CCeeE-EEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 186 AAVLC-VQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 186 ~~v~~-~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
..|.+ |.-..++. +..+++.||.|+.|++..
T Consensus 102 e~i~~~Ip~~~~~~-~~c~~~~dg~ir~~n~~p 133 (238)
T KOG2444|consen 102 ESIDLGIPNGRDSS-LGCVGAQDGRIRACNIKP 133 (238)
T ss_pred ccceeccccccccc-eeEEeccCCceeeecccc
Confidence 33322 22223333 567899999999999876
No 359
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.49 E-value=0.00087 Score=59.52 Aligned_cols=64 Identities=22% Similarity=0.318 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 148 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
-+..++.|+..|.+-..|++.. ..+...-....++|++++|+.+|.. ++.|-.+|.|.+||+..
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n-----L~~~~~ne~v~~~Vtsvafn~dg~~-l~~G~~~G~V~v~D~~~ 161 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN-----LGPLHQNERVQGPVTSVAFNQDGSL-LLAGLGDGHVTVWDMHR 161 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc-----cchhhcCCccCCcceeeEecCCCce-eccccCCCcEEEEEccC
Confidence 5667899999999999998752 2223333445689999999999995 56888999999999988
No 360
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.49 E-value=0.00092 Score=48.80 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=42.2
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccC-CceeEEEeccCCCCeEEEE--cCCCcEEEEecCC
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHD-ADLHCVDWNPLDDNLILTG--SADNSVRMFDRRN 168 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~ 168 (309)
.+..+++.||.|+.|++.-.+ .......|. .++....... .+..+++. +.|..++.|++..
T Consensus 115 ~~~c~~~~dg~ir~~n~~p~k--~~g~~g~h~~~~~e~~ivv~-sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 115 SLGCVGAQDGRIRACNIKPNK--VLGYVGQHNFESGEELIVVG-SDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ceeEEeccCCceeeeccccCc--eeeeeccccCCCcceeEEec-CCceEEeeccccchhhhhcchhh
Confidence 588999999999999987766 455555565 4454444444 56666666 6667777777654
No 361
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.49 E-value=0.008 Score=48.31 Aligned_cols=146 Identities=8% Similarity=0.070 Sum_probs=84.1
Q ss_pred CcEEEEEcC----------CCeEEEEEcCCC----CcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 104 AQEFCSVGD----------DSCLILWDARVG----TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 104 ~~~l~s~~~----------dg~i~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
..+|+.|.. .|.|.++++... ...........+++|++++-- ++. |+++ ..+.|.+|++..
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~-lv~~-~g~~l~v~~l~~- 116 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGR-LVVA-VGNKLYVYDLDN- 116 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTE-EEEE-ETTEEEEEEEET-
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCE-EEEe-ecCEEEEEEccC-
Confidence 367776653 299999999874 111112223457889998865 344 4444 357899999998
Q ss_pred CCCCCCCceeeeccC--CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 170 TSNGVGSPINKFEGH--SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
.+.+...... ...+.++... +.+ ++.|..-..+.++..+...... ...........++
T Consensus 117 -----~~~l~~~~~~~~~~~i~sl~~~--~~~-I~vgD~~~sv~~~~~~~~~~~l------------~~va~d~~~~~v~ 176 (321)
T PF03178_consen 117 -----SKTLLKKAFYDSPFYITSLSVF--KNY-ILVGDAMKSVSLLRYDEENNKL------------ILVARDYQPRWVT 176 (321)
T ss_dssp -----TSSEEEEEEE-BSSSEEEEEEE--TTE-EEEEESSSSEEEEEEETTTE-E------------EEEEEESS-BEEE
T ss_pred -----cccchhhheecceEEEEEEecc--ccE-EEEEEcccCEEEEEEEccCCEE------------EEEEecCCCccEE
Confidence 4422222222 2355555554 444 5588877888888665422211 1122233456789
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++.+-+++.. ++.+ ..+|.+.++....
T Consensus 177 ~~~~l~d~~~-~i~~-------D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 177 AAEFLVDEDT-IIVG-------DKDGNLFVLRYNP 203 (321)
T ss_dssp EEEEE-SSSE-EEEE-------ETTSEEEEEEE-S
T ss_pred EEEEecCCcE-EEEE-------cCCCeEEEEEECC
Confidence 9999866654 4433 3449999999974
No 362
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.49 E-value=0.0015 Score=58.19 Aligned_cols=71 Identities=20% Similarity=0.303 Sum_probs=53.0
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEE---eccCCCCeEEEEcCCCcEEEEec
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD---WNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
-.++|++++|+.+| .+++.|-.+|.|.+||...++ ..+.+..|..+.+.+- +.. .+..++++...|. +|.+
T Consensus 129 v~~~Vtsvafn~dg-~~l~~G~~~G~V~v~D~~~~k--~l~~i~e~~ap~t~vi~v~~t~-~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 129 VQGPVTSVAFNQDG-SLLLAGLGDGHVTVWDMHRAK--ILKVITEHGAPVTGVIFVGRTS-QNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred cCCcceeeEecCCC-ceeccccCCCcEEEEEccCCc--ceeeeeecCCccceEEEEEEeC-CCcEEEEccCCCc--eEEE
Confidence 46799999999998 889999999999999998777 5666666665554443 344 4457888877776 5544
No 363
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.41 E-value=0.00064 Score=36.61 Aligned_cols=30 Identities=20% Similarity=0.474 Sum_probs=27.9
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEeCC
Q 021657 10 NAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 39 (309)
Q Consensus 10 ~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~ 39 (309)
..|.+++|+|...+||.|+.||.|.++.+.
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 369999999999999999999999999984
No 364
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.38 E-value=0.037 Score=48.13 Aligned_cols=141 Identities=15% Similarity=0.144 Sum_probs=76.3
Q ss_pred CCeEEEEEecCCCcEEEEEc-----CCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC------
Q 021657 92 DTVEDVTFCPSSAQEFCSVG-----DDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD------ 158 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~-----~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------ 158 (309)
..+...+.+|+|....++.. .|. .|.+++.. +. ......+ ...+.-.|+| ++..+++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~--~~~lt~g--~~~t~PsWsp-DG~~lw~v~dg~~~~~v 423 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GV--AVQVLEG--HSLTRPSWSL-DADAVWVVVDGNTVVRV 423 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Cc--ceeeecC--CCCCCceECC-CCCceEEEecCcceEEE
Confidence 46788899999955544442 243 45555642 22 1222222 2378889999 87766665432
Q ss_pred ------CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc--ccccccCCCCCcC
Q 021657 159 ------NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVEQGPRTTN 230 (309)
Q Consensus 159 ------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~ 230 (309)
+.+.+.+++. +.... .....|..+.|+|||.++++.. ++.|++=-+.. .+. ...
T Consensus 424 ~~~~~~gql~~~~vd~------ge~~~---~~~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~-~~l------ 485 (591)
T PRK13616 424 IRDPATGQLARTPVDA------SAVAS---RVPGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQ-YAL------ 485 (591)
T ss_pred eccCCCceEEEEeccC------chhhh---ccCCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCc-eee------
Confidence 2333334433 22222 2345799999999999866554 47777633222 121 000
Q ss_pred CCCceeeeecCCCcceeeEEEccCCCeE
Q 021657 231 YPAGLFFQHAGHRDKVVDFHWNASDPWT 258 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 258 (309)
..+.....+-...+.++.|.+++..+
T Consensus 486 --~~~~~l~~~l~~~~~~l~W~~~~~L~ 511 (591)
T PRK13616 486 --TNPREVGPGLGDTAVSLDWRTGDSLV 511 (591)
T ss_pred --cccEEeecccCCccccceEecCCEEE
Confidence 00111112223346889999977743
No 365
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.37 E-value=0.059 Score=44.86 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=26.6
Q ss_pred CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 185 ~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+++..|++||++++ +|.-..+|.+.+...+.
T Consensus 216 ~~~i~~iavSpng~~-iAl~t~~g~l~v~ssDf 247 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKF-IALFTDSGNLWVVSSDF 247 (410)
T ss_pred CCCeEEEEECCCCCE-EEEEECCCCEEEEECcc
Confidence 468999999999996 67778889998887655
No 366
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.34 E-value=0.039 Score=41.55 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=57.9
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH 184 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 184 (309)
.+++.|+..|.+++.+..++. ....+.....--......+ ++..+..|+.|++.+..|.++ ...+.+.+..
T Consensus 64 dfVV~GCy~g~lYfl~~~tGs--~~w~f~~~~~vk~~a~~d~-~~glIycgshd~~~yalD~~~------~~cVykskcg 134 (354)
T KOG4649|consen 64 DFVVLGCYSGGLYFLCVKTGS--QIWNFVILETVKVRAQCDF-DGGLIYCGSHDGNFYALDPKT------YGCVYKSKCG 134 (354)
T ss_pred CEEEEEEccCcEEEEEecchh--heeeeeehhhhccceEEcC-CCceEEEecCCCcEEEecccc------cceEEecccC
Confidence 568899999999999999997 3333332222112233466 899999999999999999998 7777777655
Q ss_pred CCCeeEEEEec
Q 021657 185 SAAVLCVQWSP 195 (309)
Q Consensus 185 ~~~v~~~~~~~ 195 (309)
.+...+-++.|
T Consensus 135 G~~f~sP~i~~ 145 (354)
T KOG4649|consen 135 GGTFVSPVIAP 145 (354)
T ss_pred CceeccceecC
Confidence 44444444555
No 367
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.28 E-value=0.0013 Score=35.49 Aligned_cols=32 Identities=25% Similarity=0.596 Sum_probs=28.7
Q ss_pred cCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 135 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
....|.+++|+| ...++|.++.+|.|.+|.+.
T Consensus 10 l~~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCP-TMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECC-CCCEEEEEECCCeEEEEECC
Confidence 345799999999 99999999999999999983
No 368
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.28 E-value=0.035 Score=47.48 Aligned_cols=152 Identities=15% Similarity=0.098 Sum_probs=80.7
Q ss_pred CEEEEecCCCcEEEEeCCccccccccCCccc--------cccCCCCceeecCCC-------CCCCCcccCCCCCcCcccc
Q 021657 22 PYVLSGGKDKSVVLWSIQDHITSSATDPATA--------KSAGSSGSIIKQSPK-------PGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 22 ~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 86 (309)
..++.++.+|.|.-+|.+++........... ..+............ ...+.+...+..+++.+-.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 6777888899999999998865544433211 001111111111111 1234556666666665544
Q ss_pred cccccC--------------------Ce-EEEEEecCCCcEEEEEcCCC------------------eEEEEEcCCCCcc
Q 021657 87 YNGHED--------------------TV-EDVTFCPSSAQEFCSVGDDS------------------CLILWDARVGTSP 127 (309)
Q Consensus 87 ~~~~~~--------------------~v-~~~~~~~~~~~~l~s~~~dg------------------~i~iwd~~~~~~~ 127 (309)
+..... .+ ....+.+.+ .+++.++.++ .|.-.|..+++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~-g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~- 268 (488)
T cd00216 191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKT-NLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKV- 268 (488)
T ss_pred eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCC-CEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCE-
Confidence 332110 11 123344444 4566666554 788889988883
Q ss_pred eEEEee--ccCC----ceeEEEec---cCCCC---eEEEEcCCCcEEEEecCCCCCCCCCCceeeec
Q 021657 128 VIKVEK--AHDA----DLHCVDWN---PLDDN---LILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182 (309)
Q Consensus 128 ~~~~~~--~~~~----~v~~~~~~---~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 182 (309)
.-... .+.. ......+. ..++. .++.++.+|.+..+|.++ ++.+....
T Consensus 269 -~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~t------G~~~W~~~ 328 (488)
T cd00216 269 -KWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTT------GKLISARP 328 (488)
T ss_pred -EEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCC------CcEeeEeE
Confidence 32221 1110 00011111 01232 678888999999999999 88887664
No 369
>PHA02713 hypothetical protein; Provisional
Probab=97.27 E-value=0.043 Score=47.67 Aligned_cols=103 Identities=8% Similarity=0.036 Sum_probs=53.7
Q ss_pred cEEEEEcCCC-----eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC--------------------
Q 021657 105 QEFCSVGDDS-----CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN-------------------- 159 (309)
Q Consensus 105 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-------------------- 159 (309)
.+.+.||.++ .+..||..+.++.....+.........+.+ ++...+.|+.++
T Consensus 353 ~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~---~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~ 429 (557)
T PHA02713 353 TIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL---DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTH 429 (557)
T ss_pred EEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE---CCEEEEEeCCCccccccccccccccccccccc
Confidence 7778887654 478899887764332222221222222222 677888887653
Q ss_pred ---cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC------cEEEEeCCc
Q 021657 160 ---SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG------LLNIWDYEK 217 (309)
Q Consensus 160 ---~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg------~i~iwd~~~ 217 (309)
.+..||.++.. +..+..+....... +++. -++. +++.|+.++ .+..||..+
T Consensus 430 ~~~~ve~YDP~td~----W~~v~~m~~~r~~~-~~~~-~~~~-IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 430 SSNKVIRYDTVNNI----WETLPNFWTGTIRP-GVVS-HKDD-IYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred ccceEEEECCCCCe----EeecCCCCcccccC-cEEE-ECCE-EEEEeCCCCCCccceeEEEecCCC
Confidence 46678877632 33333332211111 2222 2344 677776542 356777664
No 370
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.26 E-value=0.054 Score=41.62 Aligned_cols=177 Identities=14% Similarity=0.199 Sum_probs=98.2
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-cCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
.+-...+.++.|+|+...+|++ .+...-.++=...++ .+..+.- .-...-.+.|.. ++++.++--.++.+.++.+
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav-~n~p~~iVElt~~Gd--lirtiPL~g~~DpE~Ieyig-~n~fvi~dER~~~l~~~~v 157 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAV-TNKPAAIVELTKEGD--LIRTIPLTGFSDPETIEYIG-GNQFVIVDERDRALYLFTV 157 (316)
T ss_pred ccccccccceeeCCCcceEEEe-cCCCceEEEEecCCc--eEEEecccccCChhHeEEec-CCEEEEEehhcceEEEEEE
Confidence 3445569999999998554444 444544454334555 3333321 123345778877 7777777777899998877
Q ss_pred CCCCCCCC-CC---ceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 167 RNLTSNGV-GS---PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 167 ~~~~~~~~-~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
........ .. ++......+.....++|.|....++ .+-+-.-+.||.+....................+ .
T Consensus 158 d~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~-~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~-----f 231 (316)
T COG3204 158 DADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLF-VAKERNPIGIFEVTQSPSSLSVHASLDPTADRDL-----F 231 (316)
T ss_pred cCCccEEeccceEEeccccCCCCcCceeeecCCCCceEE-EEEccCCcEEEEEecCCcccccccccCcccccce-----E
Confidence 65211000 00 1111112245678899999998766 5555666778777642211111000000000000 1
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
-..|.++.|++..+.+++-+-++ +.+.-.|..
T Consensus 232 ~~DvSgl~~~~~~~~LLVLS~ES-------r~l~Evd~~ 263 (316)
T COG3204 232 VLDVSGLEFNAITNSLLVLSDES-------RRLLEVDLS 263 (316)
T ss_pred eeccccceecCCCCcEEEEecCC-------ceEEEEecC
Confidence 23578889998777776644444 667666665
No 371
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.26 E-value=0.074 Score=46.35 Aligned_cols=113 Identities=12% Similarity=0.138 Sum_probs=62.2
Q ss_pred eEEEEEecCCCcEEEEEcC------------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 94 VEDVTFCPSSAQEFCSVGD------------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.+.-.|+|+| ..+++... .+.+.+.++..++ ... .....|..+.|+| +|..++... +|.|
T Consensus 399 ~t~PsWspDG-~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge--~~~---~~~g~Issl~wSp-DG~RiA~i~-~g~v 470 (591)
T PRK13616 399 LTRPSWSLDA-DAVWVVVDGNTVVRVIRDPATGQLARTPVDASA--VAS---RVPGPISELQLSR-DGVRAAMII-GGKV 470 (591)
T ss_pred CCCceECCCC-CceEEEecCcceEEEeccCCCceEEEEeccCch--hhh---ccCCCcCeEEECC-CCCEEEEEE-CCEE
Confidence 6667888887 44444432 2333333444333 111 2345799999999 898777765 5777
Q ss_pred EEEecCCCCCCCCCC-ce---eeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 162 RMFDRRNLTSNGVGS-PI---NKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~-~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
++--+..... +. .+ ..+. .....+.++.|.+++. |+ .+..++.-.+|.+.-.+
T Consensus 471 ~Va~Vvr~~~---G~~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~-V~~~~~~~~v~~v~vDG 528 (591)
T PRK13616 471 YLAVVEQTED---GQYALTNPREVGPGLGDTAVSLDWRTGDS-LV-VGRSDPEHPVWYVNLDG 528 (591)
T ss_pred EEEEEEeCCC---CceeecccEEeecccCCccccceEecCCE-EE-EEecCCCCceEEEecCC
Confidence 7632221110 22 11 1122 2233468899999998 44 44445555566665533
No 372
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.23 E-value=0.046 Score=47.51 Aligned_cols=149 Identities=13% Similarity=0.070 Sum_probs=82.4
Q ss_pred cEEEEEcCCCe-----EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC------cEEEEecCCCCCCC
Q 021657 105 QEFCSVGDDSC-----LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN------SVRMFDRRNLTSNG 173 (309)
Q Consensus 105 ~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~ 173 (309)
.+.+.|+.||. +-.||..+.++.............-...+ ++.+.++|+.++ .+..||..+..
T Consensus 382 ~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~---~g~iYi~GG~~~~~~~l~sve~YDP~t~~--- 455 (571)
T KOG4441|consen 382 KLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVL---GGKLYIIGGGDGSSNCLNSVECYDPETNT--- 455 (571)
T ss_pred EEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEE---CCEEEEEcCcCCCccccceEEEEcCCCCc---
Confidence 78889998864 77788877775444433322222222222 788889998665 46678887643
Q ss_pred CCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc-----EEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee
Q 021657 174 VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-----LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD 248 (309)
Q Consensus 174 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 248 (309)
+..+..+........ ++.- +..|++.|+.|+. |..||.....- ..+.........+-
T Consensus 456 -W~~~~~M~~~R~~~g-~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~W-------------~~v~~m~~~rs~~g- 517 (571)
T KOG4441|consen 456 -WTLIAPMNTRRSGFG-VAVL--NGKIYVVGGFDGTSALSSVERYDPETNQW-------------TMVAPMTSPRSAVG- 517 (571)
T ss_pred -eeecCCcccccccce-EEEE--CCEEEEECCccCCCccceEEEEcCCCCce-------------eEcccCcccccccc-
Confidence 444444433222222 3332 2337888988773 56677665111 11111122222222
Q ss_pred EEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 249 FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 249 ~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
....+..+++.++.| -...=++|..||..
T Consensus 518 --~~~~~~~ly~vGG~~--~~~~l~~ve~ydp~ 546 (571)
T KOG4441|consen 518 --VVVLGGKLYAVGGFD--GNNNLNTVECYDPE 546 (571)
T ss_pred --EEEECCEEEEEeccc--CccccceeEEcCCC
Confidence 222256778877776 55555778888766
No 373
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.17 E-value=0.041 Score=41.98 Aligned_cols=183 Identities=9% Similarity=0.034 Sum_probs=99.0
Q ss_pred ceEEEEECCCCCEEEEecCCC--cEEEEeCCccccccccCCccccccCCC--CceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDK--SVVLWSIQDHITSSATDPATAKSAGSS--GSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
-...+.|..+|.++-+.+.-| .|+.+|+.++............+..+- .....+...-..+...+++..+.+.+..
T Consensus 46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~ 125 (264)
T PF05096_consen 46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGT 125 (264)
T ss_dssp EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEE
Confidence 456788877888888888777 689999998743322221111100000 0000111112345556667777766666
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC---CceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD---ADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
+. ..+.=+.++ .++ ..|+.......|..+|..+.+........... ..++-+.|- +|...|=.-....|..
T Consensus 126 ~~-y~~EGWGLt--~dg-~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i--~G~IyANVW~td~I~~ 199 (264)
T PF05096_consen 126 FP-YPGEGWGLT--SDG-KRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI--NGKIYANVWQTDRIVR 199 (264)
T ss_dssp EE--SSS--EEE--ECS-SCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE--TTEEEEEETTSSEEEE
T ss_pred Ee-cCCcceEEE--cCC-CEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE--cCEEEEEeCCCCeEEE
Confidence 54 334567777 455 44555556678999998776622111122222 235556665 4666666656666777
Q ss_pred EecCCCCCCCCCCceeeec---------------cCCCCeeEEEEecCCCcEEEEec
Q 021657 164 FDRRNLTSNGVGSPINKFE---------------GHSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
.|..+ ++.+..+. ....-.+.||+.|....++++|=
T Consensus 200 Idp~t------G~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 200 IDPET------GKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp EETTT-------BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred EeCCC------CeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 77777 55555442 01345899999999988887774
No 374
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.14 E-value=0.058 Score=42.73 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=78.6
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC--C---CcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--G---TSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
...+..+..+-..-+.|+|+|+++.++++=+..+.|.-|++.. + ............+..-.++... ++++.+++
T Consensus 152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDa-dG~lw~~a 230 (307)
T COG3386 152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDA-DGNLWVAA 230 (307)
T ss_pred CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeC-CCCEEEec
Confidence 3344444555556688999999966666666678888888752 1 1111222333456667788887 78877655
Q ss_pred cCCC-cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEe-cCCCcEEEEecCC
Q 021657 156 SADN-SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS-PDKSSVFGSSAED 207 (309)
Q Consensus 156 ~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~d 207 (309)
..+| .|..|+.. ++.+..+......+++++|- |+.+.|++++...
T Consensus 231 ~~~g~~v~~~~pd-------G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 231 VWGGGRVVRFNPD-------GKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARS 277 (307)
T ss_pred ccCCceEEEECCC-------CcEEEEEECCCCCCccceEeCCCcCEEEEEecCC
Confidence 5554 89999877 67777777665777888885 5566677666544
No 375
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.12 E-value=0.025 Score=47.64 Aligned_cols=121 Identities=12% Similarity=0.255 Sum_probs=75.6
Q ss_pred ccCCeEEEEEecCC----CcEEEEEcCCCeEEEEEcCCCC---cceEEEeecc-----CCceeEEEeccCCCCeEEEEcC
Q 021657 90 HEDTVEDVTFCPSS----AQEFCSVGDDSCLILWDARVGT---SPVIKVEKAH-----DADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 90 ~~~~v~~~~~~~~~----~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
.-..|..+.|.|-+ +. |++.-....|.+|.+.... .........+ .---..+.|+| ....|++-..
T Consensus 55 qFEhV~GlsW~P~~~~~~pa-LLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHP-k~~iL~VLT~ 132 (671)
T PF15390_consen 55 QFEHVHGLSWAPPCTADTPA-LLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHP-KKAILTVLTA 132 (671)
T ss_pred ccceeeeeeecCcccCCCCc-eEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccC-CCceEEEEec
Confidence 34568999998853 24 4445677899999985211 1111111111 11224667999 7777777666
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
...-.+++++... .+....+ ...+-|.|.+|.+||++|+++-+..=.-+|||-..
T Consensus 133 ~dvSV~~sV~~d~----srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 133 RDVSVLPSVHCDS----SRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CceeEeeeeeeCC----ceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 6555677777531 2222334 35678999999999999877666655677887543
No 376
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.11 E-value=0.13 Score=42.96 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.3
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 122 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 122 (309)
+.|.++.|..+. .|+.-..||.++++|+.
T Consensus 81 ~~iv~~~wt~~e--~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 81 GRIVGMGWTDDE--ELVVVQSDGTVRVYDLF 109 (410)
T ss_pred CCEEEEEECCCC--eEEEEEcCCEEEEEeCC
Confidence 789999998864 46666799999999985
No 377
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.06 E-value=0.13 Score=42.19 Aligned_cols=170 Identities=15% Similarity=0.137 Sum_probs=76.8
Q ss_pred EEEecCCCcEEEEEc------CCCeEEEEEcCCCCcceEEEeecc---CCceeEEEeccCCCCeEEEEc-----------
Q 021657 97 VTFCPSSAQEFCSVG------DDSCLILWDARVGTSPVIKVEKAH---DADLHCVDWNPLDDNLILTGS----------- 156 (309)
Q Consensus 97 ~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~----------- 156 (309)
+..-|+| .+++++- .-|-+.+.|-++.+ +....... ..--+.+-|.| ..+.+++..
T Consensus 135 ~Hclp~G-~imIS~lGd~~G~g~Ggf~llD~~tf~--v~g~We~~~~~~~~gYDfw~qp-r~nvMiSSeWg~P~~~~~Gf 210 (461)
T PF05694_consen 135 VHCLPDG-RIMISALGDADGNGPGGFVLLDGETFE--VKGRWEKDRGPQPFGYDFWYQP-RHNVMISSEWGAPSMFEKGF 210 (461)
T ss_dssp EEE-SS---EEEEEEEETTS-S--EEEEE-TTT----EEEE--SB-TT------EEEET-TTTEEEE-B---HHHHTT--
T ss_pred eeecCCc-cEEEEeccCCCCCCCCcEEEEcCcccc--ccceeccCCCCCCCCCCeEEcC-CCCEEEEeccCChhhcccCC
Confidence 3444666 5666543 22567777776655 34333321 22345667777 677777764
Q ss_pred ---------CCCcEEEEecCCCCCCCCCCceeeeccCCC--CeeEEEEe--cCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 157 ---------ADNSVRMFDRRNLTSNGVGSPINKFEGHSA--AVLCVQWS--PDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 157 ---------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~--~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
....+.+||+.+ .+.++++.-... ...-|.|. |+..+=|+.+--..+|..|--...++-..
T Consensus 211 ~~~d~~~~~yG~~l~vWD~~~------r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a 284 (461)
T PF05694_consen 211 NPEDLEAGKYGHSLHVWDWST------RKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAA 284 (461)
T ss_dssp -TTTHHHH-S--EEEEEETTT------TEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEE
T ss_pred ChhHhhcccccCeEEEEECCC------CcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeee
Confidence 345799999999 888888875432 24456664 55555454444455554443322121100
Q ss_pred ----CCCCC--cCC-CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 224 ----QGPRT--TNY-PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 224 ----~~~~~--~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
..+.. ... ...++..+..-..-|+++..|.|+.+|.+++=.+ |.|+.||+.++
T Consensus 285 ~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~-------GdvrqYDISDP 344 (461)
T PF05694_consen 285 EKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLH-------GDVRQYDISDP 344 (461)
T ss_dssp EEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTT-------TEEEEEE-SST
T ss_pred eEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccC-------CcEEEEecCCC
Confidence 00000 000 0001111111234579999999999999987776 99999999974
No 378
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.00 E-value=0.16 Score=42.48 Aligned_cols=246 Identities=10% Similarity=0.019 Sum_probs=116.9
Q ss_pred ceEEEEECCCCCEEEEe-cCC----CcEEEEeCCccccccccCC-c--c-ccccCCCCceeecCCCC--C------CCCc
Q 021657 11 AEFALAMCPTEPYVLSG-GKD----KSVVLWSIQDHITSSATDP-A--T-AKSAGSSGSIIKQSPKP--G------DGND 73 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~-~~d----g~i~vwd~~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~--~------~~~~ 73 (309)
.+....++|+|++||-+ +.. ..|++.|++++........ . . .........+....... . ...+
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 34468899999998743 333 3599999998843322111 1 1 11222222222222222 1 3334
Q ss_pred ccCCCCCcCcc--cccccccCC--eEEEEEecCCCcEEEEEcCC---CeEEEEEcCCC---CcceEEEeeccCCceeEEE
Q 021657 74 KAADGPSVGPR--GIYNGHEDT--VEDVTFCPSSAQEFCSVGDD---SCLILWDARVG---TSPVIKVEKAHDADLHCVD 143 (309)
Q Consensus 74 ~~~~~~~~~~~--~~~~~~~~~--v~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~ 143 (309)
..+...+.... ..+.+.... ...+..++++..+++..... ..+.+.|+... .. ....+......+....
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~-~~~~l~~~~~~~~~~v 283 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDA-KPKLLSPREDGVEYYV 283 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS--SEEEEEESSSS-EEEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcC-CcEEEeCCCCceEEEE
Confidence 55554443322 333333332 56788899985555544433 35788888764 21 2333333333333333
Q ss_pred eccCCCCeEEEEcC---CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc--EEEEeCC-c
Q 021657 144 WNPLDDNLILTGSA---DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL--LNIWDYE-K 217 (309)
Q Consensus 144 ~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~--i~iwd~~-~ 217 (309)
-+. ++.+++.... .+.|.-.++..... ......+..+...+.-..+...+.+|++....++. |+++++. .
T Consensus 284 ~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~---~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~ 359 (414)
T PF02897_consen 284 DHH-GDRLYILTNDDAPNGRLVAVDLADPSP---AEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDG 359 (414)
T ss_dssp EEE-TTEEEEEE-TT-TT-EEEEEETTSTSG---GGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-T
T ss_pred Ecc-CCEEEEeeCCCCCCcEEEEeccccccc---ccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCC
Confidence 233 4444444432 35677777777321 01122444444433333444456667777766654 6777877 3
Q ss_pred ccccccCCCCCcCCCCceeeeec-CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 218 VGKKVEQGPRTTNYPAGLFFQHA-GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.. ..... .-.+.|..+...++.+.+.++.+ +=-.-+++..||+.
T Consensus 360 -~~---------------~~~~~~p~~g~v~~~~~~~~~~~~~~~~s----s~~~P~~~y~~d~~ 404 (414)
T PF02897_consen 360 -KE---------------SREIPLPEAGSVSGVSGDFDSDELRFSYS----SFTTPPTVYRYDLA 404 (414)
T ss_dssp -EE---------------EEEEESSSSSEEEEEES-TT-SEEEEEEE----ETTEEEEEEEEETT
T ss_pred -cE---------------EeeecCCcceEEeccCCCCCCCEEEEEEe----CCCCCCEEEEEECC
Confidence 11 11111 12234556666666666665544 11233577777776
No 379
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.99 E-value=0.11 Score=40.20 Aligned_cols=155 Identities=20% Similarity=0.252 Sum_probs=87.8
Q ss_pred CeEEEEEecCCCcEEEEEc--CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe-cCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVG--DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD-RRNL 169 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d-~~~~ 169 (309)
.+.+.++++++..+.+... ....+.++.. +.. ..... ....+..-.|++ ++...+....+...+++. ....
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~-~~~~~--~g~~l~~PS~d~-~g~~W~v~~~~~~~~~~~~~~~g 98 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGP-VRPVL--TGGSLTRPSWDP-DGWVWTVDDGSGGVRVVRDSASG 98 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCc-ceeec--cCCccccccccC-CCCEEEEEcCCCceEEEEecCCC
Confidence 6888999999954444442 3344555543 331 12222 233788889999 777777766666667664 2221
Q ss_pred CCCCCCCceeeeccC--CCCeeEEEEecCCCcEEEEe--cCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcc
Q 021657 170 TSNGVGSPINKFEGH--SAAVLCVQWSPDKSSVFGSS--AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDK 245 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
. ... ...... ...|..+.++|||..+.+.. ..++.|.+--+....... +.. ..............
T Consensus 99 ~----~~~-~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~---~~~---l~~~~~~~~~~~~~ 167 (253)
T PF10647_consen 99 T----GEP-VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGV---PRR---LTGPRRVAPPLLSD 167 (253)
T ss_pred c----cee-EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCC---cce---eccceEecccccCc
Confidence 1 222 122211 12899999999999866555 235777776654422210 000 01122222234568
Q ss_pred eeeEEEccCCCeEEEEecC
Q 021657 246 VVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 246 v~~~~~~~~~~~~~~s~s~ 264 (309)
+.+++|.+++..++++...
T Consensus 168 v~~v~W~~~~~L~V~~~~~ 186 (253)
T PF10647_consen 168 VTDVAWSDDSTLVVLGRSA 186 (253)
T ss_pred ceeeeecCCCEEEEEeCCC
Confidence 8999999988766654433
No 380
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.99 E-value=0.11 Score=41.74 Aligned_cols=115 Identities=14% Similarity=0.164 Sum_probs=63.1
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE-eeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV-EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
.+.++... + .+++.|.....+.++..+......... .......++++.+-+ +++.++.+..+|.+.++.......
T Consensus 131 ~i~sl~~~--~-~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~-d~~~~i~~D~~gnl~~l~~~~~~~ 206 (321)
T PF03178_consen 131 YITSLSVF--K-NYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLV-DEDTIIVGDKDGNLFVLRYNPEIP 206 (321)
T ss_dssp SEEEEEEE--T-TEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE--SSSEEEEEETTSEEEEEEE-SS-S
T ss_pred EEEEEecc--c-cEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEec-CCcEEEEEcCCCeEEEEEECCCCc
Confidence 56666654 3 578888887888888655432112211 222345688888886 557999999999999998763211
Q ss_pred CCC-CC----ceeeeccCCCCeeEE---EEec--CCCc-----EEEEecCCCcEEE
Q 021657 172 NGV-GS----PINKFEGHSAAVLCV---QWSP--DKSS-----VFGSSAEDGLLNI 212 (309)
Q Consensus 172 ~~~-~~----~~~~~~~~~~~v~~~---~~~~--~~~~-----l~~~~~~dg~i~i 212 (309)
... +. .+..+. ....|+++ ++.| .+.. .++-++.+|.|-+
T Consensus 207 ~~~~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 207 NSRDGDPKLERISSFH-LGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGV 261 (321)
T ss_dssp STTTTTTBEEEEEEEE--SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEE
T ss_pred ccccccccceeEEEEE-CCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEE
Confidence 111 11 223333 34567777 4445 2221 2446777888873
No 381
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.90 E-value=0.13 Score=39.74 Aligned_cols=118 Identities=13% Similarity=0.108 Sum_probs=67.3
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEE-cCCCCcceEEEeeccC-CceeEEEeccCCCCeEEEEc---CCCcEEEEecC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWD-ARVGTSPVIKVEKAHD-ADLHCVDWNPLDDNLILTGS---ADNSVRMFDRR 167 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd-~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~ 167 (309)
.+..-.|++++ ...+....+...+++. ...+.......-.... ..|..++++| +|..++... .++.|.+--+.
T Consensus 67 ~l~~PS~d~~g-~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSp-DG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 67 SLTRPSWDPDG-WVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSP-DGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred ccccccccCCC-CEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECC-CCcEEEEEEecCCCCeEEEEEEE
Confidence 67777899987 5555555556666663 3333321222211112 2899999999 888776655 35777776554
Q ss_pred CCCCC---CCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEE
Q 021657 168 NLTSN---GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI 212 (309)
Q Consensus 168 ~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~i 212 (309)
..... ....++.........+..++|.+++..+++....+..+..
T Consensus 145 r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~ 192 (253)
T PF10647_consen 145 RDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVR 192 (253)
T ss_pred eCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCCCceeE
Confidence 32211 0012222222335678999999999854444444443443
No 382
>PHA02713 hypothetical protein; Provisional
Probab=96.89 E-value=0.031 Score=48.57 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=51.9
Q ss_pred eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC------cEEEEecCC-CCCCCCCCceeeeccCCCC
Q 021657 115 CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN------SVRMFDRRN-LTSNGVGSPINKFEGHSAA 187 (309)
Q Consensus 115 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~-~~~~~~~~~~~~~~~~~~~ 187 (309)
.+..||..+.++.....+....... +++.. ++...+.|+.++ .+..||..+ .+ +..+..+......
T Consensus 433 ~ve~YDP~td~W~~v~~m~~~r~~~-~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~----W~~~~~m~~~r~~ 505 (557)
T PHA02713 433 KVIRYDTVNNIWETLPNFWTGTIRP-GVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNG----WELITTTESRLSA 505 (557)
T ss_pred eEEEECCCCCeEeecCCCCcccccC-cEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCC----eeEccccCccccc
Confidence 4778888877653333322222222 22222 577778887642 467788876 33 4445455433333
Q ss_pred eeEEEEecCCCcEEEEecCCC--cEEEEeCCc
Q 021657 188 VLCVQWSPDKSSVFGSSAEDG--LLNIWDYEK 217 (309)
Q Consensus 188 v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~ 217 (309)
...+.+ ++ .+++.|+.|+ .+..||..+
T Consensus 506 ~~~~~~--~~-~iyv~Gg~~~~~~~e~yd~~~ 534 (557)
T PHA02713 506 LHTILH--DN-TIMMLHCYESYMLQDTFNVYT 534 (557)
T ss_pred ceeEEE--CC-EEEEEeeecceeehhhcCccc
Confidence 333333 33 4788999888 667777766
No 383
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.89 E-value=0.24 Score=42.53 Aligned_cols=185 Identities=11% Similarity=0.072 Sum_probs=99.6
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCcccc-------ccCC-CCce-eecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAK-------SAGS-SGSI-IKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
+..+..++.++.|.-.|.++++........... .... .... ..+..+..++.+..++..+++.+-......
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~ 140 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNND 140 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence 446777888899999999888655554332210 0000 0000 111123345677777777777665543322
Q ss_pred CC-----eE-EEEEecCCCcEEEEEc---------CCCeEEEEEcCCCCcceEEEeeccCC-------------------
Q 021657 92 DT-----VE-DVTFCPSSAQEFCSVG---------DDSCLILWDARVGTSPVIKVEKAHDA------------------- 137 (309)
Q Consensus 92 ~~-----v~-~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~------------------- 137 (309)
.. +. ...+.. + +++.++ .+|.+.-+|..+++. .-.......
T Consensus 141 ~~~~~~~i~ssP~v~~-~--~v~vg~~~~~~~~~~~~g~v~alD~~TG~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~g 215 (488)
T cd00216 141 QVPPGYTMTGAPTIVK-K--LVIIGSSGAEFFACGVRGALRAYDVETGKL--LWRFYTTEPDPNAFPTWGPDRQMWGPGG 215 (488)
T ss_pred CcCcceEecCCCEEEC-C--EEEEeccccccccCCCCcEEEEEECCCCce--eeEeeccCCCcCCCCCCCCCcceecCCC
Confidence 10 11 112221 2 344443 468889999988873 222221100
Q ss_pred -ce-eEEEeccCCCCeEEEEcCCC------------------cEEEEecCCCCCCCCCCceeeeccCCCCe------eEE
Q 021657 138 -DL-HCVDWNPLDDNLILTGSADN------------------SVRMFDRRNLTSNGVGSPINKFEGHSAAV------LCV 191 (309)
Q Consensus 138 -~v-~~~~~~~~~~~~l~~~~~dg------------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~v------~~~ 191 (309)
.+ ...++++ .+..++.++.++ .|.-+|..+ ++.+..++...... ...
T Consensus 216 ~~vw~~pa~d~-~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~t------G~~~W~~~~~~~~~~~~~~~s~p 288 (488)
T cd00216 216 GTSWASPTYDP-KTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADT------GKVKWFYQTTPHDLWDYDGPNQP 288 (488)
T ss_pred CCccCCeeEeC-CCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCC------CCEEEEeeCCCCCCcccccCCCC
Confidence 01 1344555 566777777665 688899998 88887765321111 011
Q ss_pred EEe----cCCC--cEEEEecCCCcEEEEeCCc
Q 021657 192 QWS----PDKS--SVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 192 ~~~----~~~~--~l~~~~~~dg~i~iwd~~~ 217 (309)
.+. -++. .+++.++.+|.+...|.++
T Consensus 289 ~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~t 320 (488)
T cd00216 289 SLADIKPKDGKPVPAIVHAPKNGFFYVLDRTT 320 (488)
T ss_pred eEEeccccCCCeeEEEEEECCCceEEEEECCC
Confidence 111 1222 2456788899999999987
No 384
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.83 E-value=0.013 Score=47.63 Aligned_cols=190 Identities=12% Similarity=0.045 Sum_probs=81.7
Q ss_pred CCCcccCCCCCcCcccccccc---cCCeEEEEEecCCCcEEEEEcC--------------------CCeEEEEEcCCCCc
Q 021657 70 DGNDKAADGPSVGPRGIYNGH---EDTVEDVTFCPSSAQEFCSVGD--------------------DSCLILWDARVGTS 126 (309)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~~~--------------------dg~i~iwd~~~~~~ 126 (309)
.+.+.+.+..+.+........ ..--.++-|.|.. +.++|... -.++.+||+.+.+
T Consensus 156 ~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~-nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~- 233 (461)
T PF05694_consen 156 PGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRH-NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRK- 233 (461)
T ss_dssp --EEEEE-TTT--EEEE--SB-TT------EEEETTT-TEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTE-
T ss_pred CCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCC-CEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCc-
Confidence 345566666666555544432 2234566777766 66666643 3689999999888
Q ss_pred ceEEEeeccCC--ceeEEEec--cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeee-----------------ccCC
Q 021657 127 PVIKVEKAHDA--DLHCVDWN--PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF-----------------EGHS 185 (309)
Q Consensus 127 ~~~~~~~~~~~--~v~~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----------------~~~~ 185 (309)
..+.+.-... ....+.|. |....-|+.+...++|..|--....... .+.+..+ ....
T Consensus 234 -~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~-a~kVi~ip~~~v~~~~lp~ml~~~~~~P 311 (461)
T PF05694_consen 234 -LLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWA-AEKVIDIPAKKVEGWILPEMLKPFGAVP 311 (461)
T ss_dssp -EEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEE-EEEEEEE--EE--SS---GGGGGG-EE-
T ss_pred -EeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCee-eeEEEECCCcccCcccccccccccccCC
Confidence 5555543332 34456664 4222334444455556555332211000 1112222 1123
Q ss_pred CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc----eeeeecCCCcceeeEEEccCCCeEEEE
Q 021657 186 AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG----LFFQHAGHRDKVVDFHWNASDPWTVVS 261 (309)
Q Consensus 186 ~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~s 261 (309)
.-|+.|.+|.|.++|++++=.+|.|+.||+.....+............. +...-..-.+...-+..|.||.++.+|
T Consensus 312 ~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvT 391 (461)
T PF05694_consen 312 PLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVT 391 (461)
T ss_dssp -----EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE
T ss_pred CceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEE
Confidence 4579999999999999999999999999998855432211000000000 000000111234667888999999998
Q ss_pred ec
Q 021657 262 VS 263 (309)
Q Consensus 262 ~s 263 (309)
.|
T Consensus 392 nS 393 (461)
T PF05694_consen 392 NS 393 (461)
T ss_dssp --
T ss_pred ee
Confidence 87
No 385
>PHA03098 kelch-like protein; Provisional
Probab=96.82 E-value=0.29 Score=42.56 Aligned_cols=103 Identities=10% Similarity=0.042 Sum_probs=52.0
Q ss_pred cEEEEEcCC-----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC------CcEEEEecCCCCCCC
Q 021657 105 QEFCSVGDD-----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD------NSVRMFDRRNLTSNG 173 (309)
Q Consensus 105 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~ 173 (309)
.+++.||.+ ..+..||..+.++.....+...... .+++.. ++..++.|+.+ ..+..||..+..
T Consensus 344 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~--- 417 (534)
T PHA03098 344 RIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVVNV--NNLIYVIGGISKNDELLKTVECFSLNTNK--- 417 (534)
T ss_pred EEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEEEE--CCEEEEECCcCCCCcccceEEEEeCCCCe---
Confidence 677777765 3577888877664322222111111 122222 56777777742 357888987632
Q ss_pred CCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--------cEEEEeCCc
Q 021657 174 VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--------LLNIWDYEK 217 (309)
Q Consensus 174 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--------~i~iwd~~~ 217 (309)
...+..+....... +++ ..++. +++.|+.+. .+.+||..+
T Consensus 418 -W~~~~~~p~~r~~~-~~~-~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~ 465 (534)
T PHA03098 418 -WSKGSPLPISHYGG-CAI-YHDGK-IYVIGGISYIDNIKVYNIVESYNPVT 465 (534)
T ss_pred -eeecCCCCccccCc-eEE-EECCE-EEEECCccCCCCCcccceEEEecCCC
Confidence 22222222111111 222 22344 666776432 377888776
No 386
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.81 E-value=0.12 Score=39.55 Aligned_cols=104 Identities=15% Similarity=0.226 Sum_probs=68.8
Q ss_pred eEEEEEecCCCcEEEEEcCCCe-EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-----CcEEEEecC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSC-LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-----NSVRMFDRR 167 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~ 167 (309)
-..|.|+|..+.-++.+-.-|+ ..++|....+.+....-.....----=.|+| ++.+|...-.| |.|-+||.+
T Consensus 70 ~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~-dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 70 GHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSP-DGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred cCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCC-CCcEEEeecCCCCCCCceEEEEecc
Confidence 3456777776566666666555 4688887776433322111111111225899 99998886544 789999999
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEE
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 203 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 203 (309)
.. ...+-++..|.-....+.+.+||+.++++
T Consensus 149 ~~-----fqrvgE~~t~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 149 EG-----FQRVGEFSTHGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred cc-----cceecccccCCcCcceeEEecCCcEEEEe
Confidence 64 56778888888788899999999965433
No 387
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.77 E-value=0.047 Score=49.58 Aligned_cols=151 Identities=15% Similarity=0.119 Sum_probs=91.7
Q ss_pred CeEEEEEecCCC-cEEEEEcCCCeEEEEEcCCCCcce---EEEee------ccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 93 TVEDVTFCPSSA-QEFCSVGDDSCLILWDARVGTSPV---IKVEK------AHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 93 ~v~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
+|..+...+|+. ..++..+++-.|..||+++-.... ...+. .......++.|+|.-....+....|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 455666666642 223334445578899987543211 11111 12234568889985556677788899999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+..+... ...+..+. .....++++|+|.|..+ +.|-.+|++.-|.....-+.... . .+.. .
T Consensus 182 V~~~~~~-----~~~v~s~p-~t~~~Tav~WSprGKQl-~iG~nnGt~vQy~P~leik~~ip--~------Pp~~----e 242 (1405)
T KOG3630|consen 182 VKSTKQL-----AQNVTSFP-VTNSQTAVLWSPRGKQL-FIGRNNGTEVQYEPSLEIKSEIP--E------PPVE----E 242 (1405)
T ss_pred hhhhhhh-----hhhhcccC-cccceeeEEecccccee-eEecCCCeEEEeecccceeeccc--C------CCcC----C
Confidence 9877652 22233333 34568999999999985 58999999988876542111111 0 1111 1
Q ss_pred CcceeeEEEccCCCeEEEEe
Q 021657 243 RDKVVDFHWNASDPWTVVSV 262 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~ 262 (309)
...|.+|.|-....++++-+
T Consensus 243 ~yrvl~v~Wl~t~eflvvy~ 262 (1405)
T KOG3630|consen 243 NYRVLSVTWLSTQEFLVVYG 262 (1405)
T ss_pred CcceeEEEEecceeEEEEec
Confidence 46789999987766665543
No 388
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.73 E-value=0.2 Score=39.31 Aligned_cols=58 Identities=10% Similarity=0.222 Sum_probs=37.0
Q ss_pred cEEEEEcCCCeEEEEEcCCCCc---ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 105 QEFCSVGDDSCLILWDARVGTS---PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
..|+.+ ....|.+|....... ...+.+ .-...+.+++|. ++.++.|..+ ...+.|+.+
T Consensus 106 ~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~-~lp~~~~~i~~~---~~~i~v~~~~-~f~~idl~~ 166 (275)
T PF00780_consen 106 RRLCVA-VKKKILIYEWNDPRNSFSKLLKEI-SLPDPPSSIAFL---GNKICVGTSK-GFYLIDLNT 166 (275)
T ss_pred eEEEEE-ECCEEEEEEEECCcccccceeEEE-EcCCCcEEEEEe---CCEEEEEeCC-ceEEEecCC
Confidence 444444 445899998876421 123333 345788999996 4677777654 477889986
No 389
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.72 E-value=0.14 Score=44.50 Aligned_cols=122 Identities=12% Similarity=0.205 Sum_probs=70.6
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCce--eeeccCCCCeeEEEEe--cCCCcEEEEecCCCcEEE
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI--NKFEGHSAAVLCVQWS--PDKSSVFGSSAEDGLLNI 212 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~--~~~~~l~~~~~~dg~i~i 212 (309)
....-+.-+. -++..++-+....+.|||.+. +..- ..+ .....|..+.|. |++..++++| -.+.|.+
T Consensus 30 ~~~~li~gss-~~k~a~V~~~~~~LtIWD~~~------~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVG-f~~~v~l 100 (631)
T PF12234_consen 30 SNPSLISGSS-IKKIAVVDSSRSELTIWDTRS------GVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVG-FPHHVLL 100 (631)
T ss_pred CCcceEeecc-cCcEEEEECCCCEEEEEEcCC------cEEEEeeee-cCCCceeeceeeecCCCCEEEEEE-cCcEEEE
Confidence 3444555554 445555555556899999987 4322 222 346789999985 7888877555 4777888
Q ss_pred EeCCcccccccCCCCCcCCCCceeeeecCCC-cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 213 WDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR-DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
|--........ ...+..-.......|+ .+|.+..|.++|..++++| +.+.|++-.
T Consensus 101 ~~Q~R~dy~~~----~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG----------Nqlfv~dk~ 156 (631)
T PF12234_consen 101 YTQLRYDYTNK----GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG----------NQLFVFDKW 156 (631)
T ss_pred EEccchhhhcC----CcccceeEEEEeecCCCCCccceeEecCCeEEEEeC----------CEEEEECCC
Confidence 76432111110 0011111122233444 6899999999876544433 578888754
No 390
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=96.70 E-value=0.00018 Score=58.23 Aligned_cols=147 Identities=7% Similarity=0.081 Sum_probs=101.9
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
|-.+++ ...|-|.+.-|+.++.+..+..||-...... .
T Consensus 33 alv~pi-~~~w~~e~~nlavaca~tiv~~YD~agq~~l-----------------------------------------e 70 (615)
T KOG2247|consen 33 ALVGPI-IHRWRPEGHNLAVACANTIVIYYDKAGQVIL-----------------------------------------E 70 (615)
T ss_pred hccccc-eeeEecCCCceehhhhhhHHHhhhhhcceec-----------------------------------------c
Confidence 333344 6678887777888888989999986532110 0
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
-..++....++|..+++..++.+-..+.+.+||+.+....... .+....-.-+.|++ ....++.+...|.+.+++.
T Consensus 71 -~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE--~gg~~s~sll~wsK-g~~el~ig~~~gn~viynh 146 (615)
T KOG2247|consen 71 -LNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLE--SGGTSSKSLLAWSK-GTPELVIGNNAGNIVIYNH 146 (615)
T ss_pred -cCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHh--ccCcchHHHHhhcc-CCccccccccccceEEEec
Confidence 1123455678888888777777888899999999876522222 22222333378999 8889999999999999999
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 207 (309)
++ .+.+.....|...++++++.+.+.. +.++.|
T Consensus 147 gt------sR~iiv~Gkh~RRgtq~av~lEd~v--il~dcd 179 (615)
T KOG2247|consen 147 GT------SRRIIVMGKHQRRGTQIAVTLEDYV--ILCDCD 179 (615)
T ss_pred cc------hhhhhhhcccccceeEEEeccccee--eecCcH
Confidence 88 5555555557788999999998863 345444
No 391
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.62 E-value=0.32 Score=40.30 Aligned_cols=53 Identities=9% Similarity=0.141 Sum_probs=37.6
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccc
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKA 300 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~ 300 (309)
.....+......+.++..+|.+.+ +|. +++ =|.|.++|+. .+..++.++|.++
T Consensus 298 ~~r~~l~D~~R~~~~i~~sP~~~l-aA~-tDs------lGRV~LiD~~------~~~vvrmWKGYRd 350 (415)
T PF14655_consen 298 PMRFGLPDSKREGESICLSPSGRL-AAV-TDS------LGRVLLIDVA------RGIVVRMWKGYRD 350 (415)
T ss_pred ceEEeeccCCceEEEEEECCCCCE-EEE-EcC------CCcEEEEECC------CChhhhhhccCcc
Confidence 344555666677999999998664 433 233 2899999999 6777777777665
No 392
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.60 E-value=0.35 Score=40.54 Aligned_cols=117 Identities=17% Similarity=0.211 Sum_probs=67.6
Q ss_pred CeEEEEEecCCCcEEEEEcCCC----eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC---------
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDS----CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN--------- 159 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--------- 159 (309)
.+....++|++..++++-+..| .|++.|+.+++. ....+.. .....+.|.+ +++.|+-...+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~-l~d~i~~--~~~~~~~W~~-d~~~~~y~~~~~~~~~~~~~~ 200 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKF-LPDGIEN--PKFSSVSWSD-DGKGFFYTRFDEDQRTSDSGY 200 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEE-EEEEEEE--EESEEEEECT-TSSEEEEEECSTTTSS-CCGC
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcC-cCCcccc--cccceEEEeC-CCCEEEEEEeCcccccccCCC
Confidence 3446788999955555544444 599999998862 1222222 1223499999 766555443322
Q ss_pred --cEEEEecCCCCCCCCCCceeeeccCCCC--eeEEEEecCCCcEEEEecCCC---cEEEEeCCc
Q 021657 160 --SVRMFDRRNLTSNGVGSPINKFEGHSAA--VLCVQWSPDKSSVFGSSAEDG---LLNIWDYEK 217 (309)
Q Consensus 160 --~i~i~d~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~dg---~i~iwd~~~ 217 (309)
.|+.|.+.+.. ..-...+...... ...+..++|++++++...... .+.+.|+..
T Consensus 201 ~~~v~~~~~gt~~----~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~ 261 (414)
T PF02897_consen 201 PRQVYRHKLGTPQ----SEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDD 261 (414)
T ss_dssp CEEEEEEETTS-G----GG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCC
T ss_pred CcEEEEEECCCCh----HhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccc
Confidence 37888887742 1212333333322 567889999999876554443 467777765
No 393
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=96.58 E-value=0.012 Score=47.97 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=59.2
Q ss_pred CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCcee-eeccC-------
Q 021657 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN-KFEGH------- 184 (309)
Q Consensus 113 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~------- 184 (309)
.+.+.|+|+.+++ ...+......+....|+| +++.++-.. ++.|.+++..+ +...+ +..+.
T Consensus 22 ~~~y~i~d~~~~~---~~~l~~~~~~~~~~~~sP-~g~~~~~v~-~~nly~~~~~~------~~~~~lT~dg~~~i~nG~ 90 (353)
T PF00930_consen 22 KGDYYIYDIETGE---ITPLTPPPPKLQDAKWSP-DGKYIAFVR-DNNLYLRDLAT------GQETQLTTDGEPGIYNGV 90 (353)
T ss_dssp EEEEEEEETTTTE---EEESS-EETTBSEEEE-S-SSTEEEEEE-TTEEEEESSTT------SEEEESES--TTTEEESB
T ss_pred ceeEEEEecCCCc---eEECcCCccccccceeec-CCCeeEEEe-cCceEEEECCC------CCeEEeccccceeEEcCc
Confidence 4678999998876 333333367889999999 899888874 67899998876 32221 11110
Q ss_pred ---------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 185 ---------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 185 ---------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
-..-..+.|+||+++|+..--.+..|..+.+..
T Consensus 91 ~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~ 132 (353)
T PF00930_consen 91 PDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPD 132 (353)
T ss_dssp --HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEE
T ss_pred cceeccccccccccceEECCCCCEEEEEEECCcCCceEEeec
Confidence 112356889999998766666666676666544
No 394
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.49 E-value=0.31 Score=38.56 Aligned_cols=150 Identities=11% Similarity=0.193 Sum_probs=75.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+..+.-++||+++++++.-....-||-... ...+. -..-
T Consensus 146 s~~~~~r~~dG~~vavs~~G~~~~s~~~G~~--------------------------------------~w~~~--~r~~ 185 (302)
T PF14870_consen 146 SINDITRSSDGRYVAVSSRGNFYSSWDPGQT--------------------------------------TWQPH--NRNS 185 (302)
T ss_dssp -EEEEEE-TTS-EEEEETTSSEEEEE-TT-S--------------------------------------S-EEE--E--S
T ss_pred eeEeEEECCCCcEEEEECcccEEEEecCCCc--------------------------------------cceEE--ccCc
Confidence 6788888899998888876666667775421 01111 1123
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEE---EeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK---VEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
..+|..|.|.|++ .+.+. ...|.|+.=+.......-.. ......-.+..++|.+ +....++|+ .|.+ +....
T Consensus 186 ~~riq~~gf~~~~-~lw~~-~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~-~~~~wa~gg-~G~l-~~S~D 260 (302)
T PF14870_consen 186 SRRIQSMGFSPDG-NLWML-ARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRP-PNEIWAVGG-SGTL-LVSTD 260 (302)
T ss_dssp SS-EEEEEE-TTS--EEEE-ETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESS-SS-EEEEES-TT-E-EEESS
T ss_pred cceehhceecCCC-CEEEE-eCCcEEEEccCCCCccccccccCCcccCceeeEEEEecC-CCCEEEEeC-CccE-EEeCC
Confidence 5689999999997 54443 48888888762111100001 0112233478999998 667777665 4544 34444
Q ss_pred CCCCCCCCCceeee---ccCCCCeeEEEEecCCCcEEEEecCCCcEEEE
Q 021657 168 NLTSNGVGSPINKF---EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213 (309)
Q Consensus 168 ~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iw 213 (309)
. ++.-.+. ......++.|.|.++.+ -++.| .+|.+.-|
T Consensus 261 g------GktW~~~~~~~~~~~n~~~i~f~~~~~-gf~lG-~~G~ll~~ 301 (302)
T PF14870_consen 261 G------GKTWQKDRVGENVPSNLYRIVFVNPDK-GFVLG-QDGVLLRY 301 (302)
T ss_dssp T------TSS-EE-GGGTTSSS---EEEEEETTE-EEEE--STTEEEEE
T ss_pred C------CccceECccccCCCCceEEEEEcCCCc-eEEEC-CCcEEEEe
Confidence 4 3333332 23345688899987655 35444 58877655
No 395
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.45 E-value=0.015 Score=30.39 Aligned_cols=32 Identities=19% Similarity=0.473 Sum_probs=26.9
Q ss_pred CceeEEEeccCCC--CeEEEEcCCCcEEEEecCC
Q 021657 137 ADLHCVDWNPLDD--NLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 137 ~~v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~ 168 (309)
+.+.++.|+|..+ .+|+.+-.-|.|.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 3688999998445 6888888889999999995
No 396
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.35 E-value=0.34 Score=37.50 Aligned_cols=169 Identities=13% Similarity=0.153 Sum_probs=103.1
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+.|-+. -|.++.|+|+.+.|++......-.||=..++......
T Consensus 81 i~g~~~-nvS~LTynp~~rtLFav~n~p~~iVElt~~Gdlirti------------------------------------ 123 (316)
T COG3204 81 ILGETA-NVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTI------------------------------------ 123 (316)
T ss_pred cccccc-cccceeeCCCcceEEEecCCCceEEEEecCCceEEEe------------------------------------
Confidence 345555 4899999999998888877777767654433211111
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce-----EEEe--ecc-CCceeEEEeccCCCCeEEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-----IKVE--KAH-DADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~--~~~-~~~v~~~~~~~~~~~~l~~~ 155 (309)
.+.+ -.....+.+...+ .+.++--.++.+.++.+..+.... ...+ ..+ +...-.++|+| ....|+.+
T Consensus 124 --PL~g-~~DpE~Ieyig~n-~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~-~~~~l~~a 198 (316)
T COG3204 124 --PLTG-FSDPETIEYIGGN-QFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDP-VDHRLFVA 198 (316)
T ss_pred --cccc-cCChhHeEEecCC-EEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCC-CCceEEEE
Confidence 1112 1223556777766 666666678888888776553110 1111 112 45678999999 67777777
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeecc-------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEG-------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
-.-.-+.||........ -.+..... .-..|.++.|++....|++-+.+++.+.-.|...
T Consensus 199 KEr~P~~I~~~~~~~~~---l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 199 KERNPIGIFEVTQSPSS---LSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred EccCCcEEEEEecCCcc---cccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecCC
Confidence 67777888776642110 00111111 1235678889987777888888888888777765
No 397
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.24 E-value=0.44 Score=37.73 Aligned_cols=112 Identities=14% Similarity=0.297 Sum_probs=57.8
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
-.+.+..+.-+++| .+++++..-....-||--... -..........|.+|.|.| ++.+.+++ ..|.|++=+....
T Consensus 143 ~~gs~~~~~r~~dG-~~vavs~~G~~~~s~~~G~~~--w~~~~r~~~~riq~~gf~~-~~~lw~~~-~Gg~~~~s~~~~~ 217 (302)
T PF14870_consen 143 TSGSINDITRSSDG-RYVAVSSRGNFYSSWDPGQTT--WQPHNRNSSRRIQSMGFSP-DGNLWMLA-RGGQIQFSDDPDD 217 (302)
T ss_dssp ----EEEEEE-TTS--EEEEETTSSEEEEE-TT-SS---EEEE--SSS-EEEEEE-T-TS-EEEEE-TTTEEEEEE-TTE
T ss_pred CcceeEeEEECCCC-cEEEEECcccEEEEecCCCcc--ceEEccCccceehhceecC-CCCEEEEe-CCcEEEEccCCCC
Confidence 34668888888988 777777666666678754433 2333334567899999999 77766654 8888888762210
Q ss_pred -CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcE
Q 021657 170 -TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 210 (309)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i 210 (309)
... .+.+..+....-.+..++|.+++. +.|+|+ .|.+
T Consensus 218 ~~~w--~~~~~~~~~~~~~~ld~a~~~~~~-~wa~gg-~G~l 255 (302)
T PF14870_consen 218 GETW--SEPIIPIKTNGYGILDLAYRPPNE-IWAVGG-SGTL 255 (302)
T ss_dssp EEEE-----B-TTSS--S-EEEEEESSSS--EEEEES-TT-E
T ss_pred cccc--ccccCCcccCceeeEEEEecCCCC-EEEEeC-CccE
Confidence 000 011111222233478999999887 566665 5544
No 398
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=96.15 E-value=0.88 Score=40.33 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=74.9
Q ss_pred CeEEEEEecC-CCcEEEEEcCCCeEEEEEcCC-------C----Cc-------ceEEEeeccCCceeEEEec--cCCCCe
Q 021657 93 TVEDVTFCPS-SAQEFCSVGDDSCLILWDARV-------G----TS-------PVIKVEKAHDADLHCVDWN--PLDDNL 151 (309)
Q Consensus 93 ~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~-------~----~~-------~~~~~~~~~~~~v~~~~~~--~~~~~~ 151 (309)
.|+-|....- +...|+.|.+||.|.+|.+++ . +. .+...+ .-...+++++++ . ..++
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~-~v~~SaWGLdIh~~~-~~rl 179 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHL-RVGASAWGLDIHDYK-KSRL 179 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEe-ecCCceeEEEEEecC-cceE
Confidence 4666655432 236788999999999997521 1 00 011111 234578999998 6 7788
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC-----CcEEEEecCCCcEEEEeCC
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK-----SSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~~~~dg~i~iwd~~ 216 (309)
+|+++....|.||-...... ......-..+...|-+|+|-++. ...+++++-.|.+.+|++.
T Consensus 180 IAVSsNs~~VTVFaf~l~~~---r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 180 IAVSSNSQEVTVFAFALVDE---RFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred EEEecCCceEEEEEEecccc---ccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 89888888888876554211 11111111255678889997754 1246688889999999984
No 399
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.13 E-value=0.26 Score=42.94 Aligned_cols=119 Identities=18% Similarity=0.239 Sum_probs=72.9
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEec--cCCCCeEEEEcCCCcEEEEecCC--
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN--PLDDNLILTGSADNSVRMFDRRN-- 168 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~dg~i~i~d~~~-- 168 (309)
...-+.-+.-+ +..+.-+....+.|||.+.+.......+ ...+.|..+.|. | +++.+++.+..+.|.+|--..
T Consensus 31 ~~~li~gss~~-k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~-d~qsiLaVGf~~~v~l~~Q~R~d 107 (631)
T PF12234_consen 31 NPSLISGSSIK-KIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTP-DGQSILAVGFPHHVLLYTQLRYD 107 (631)
T ss_pred CcceEeecccC-cEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecC-CCCEEEEEEcCcEEEEEEccchh
Confidence 34444444444 3333444456799999987774333333 457789999995 5 677777777888888875321
Q ss_pred -CCCCCCCCceeeec--c-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 169 -LTSNGVGSPINKFE--G-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 169 -~~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
....+...+++++. . ...+|.+..|.++|.. + +|+ ++.+.|+|-..
T Consensus 108 y~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~L-v-V~s-GNqlfv~dk~~ 157 (631)
T PF12234_consen 108 YTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTL-V-VGS-GNQLFVFDKWL 157 (631)
T ss_pred hhcCCcccceeEEEEeecCCCCCccceeEecCCeE-E-EEe-CCEEEEECCCc
Confidence 01111134444442 2 2367899999999973 3 444 46788887544
No 400
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=96.13 E-value=0.13 Score=37.10 Aligned_cols=31 Identities=16% Similarity=0.262 Sum_probs=26.2
Q ss_pred CCeEEEEEecCC-----CcEEEEEcCCCeEEEEEcC
Q 021657 92 DTVEDVTFCPSS-----AQEFCSVGDDSCLILWDAR 122 (309)
Q Consensus 92 ~~v~~~~~~~~~-----~~~l~s~~~dg~i~iwd~~ 122 (309)
..|..++|+|.| +.+|++...++.|.||...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 378999999954 5679999999999999865
No 401
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.12 E-value=0.49 Score=39.63 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=88.8
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC------CCCeEEEEcCCCcEEEEecCCCCCCCCCCce
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL------DDNLILTGSADNSVRMFDRRNLTSNGVGSPI 178 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 178 (309)
-++..|+....++--|++.++ ++.....|... -+.|.|. ....-++|-.+..|.-.|.|.. +..+
T Consensus 481 li~~dg~~~~kLykmDIErGk--vveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~-----gNKi 551 (776)
T COG5167 481 LIYLDGGERDKLYKMDIERGK--VVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRAR-----GNKI 551 (776)
T ss_pred eEEecCCCcccceeeecccce--eeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEeccccc-----CCce
Confidence 344455566667777887777 67777666654 5677762 1123344555666666777763 3222
Q ss_pred eeec----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccC
Q 021657 179 NKFE----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS 254 (309)
Q Consensus 179 ~~~~----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 254 (309)
.... ..+....+..-...| .+|+++..|-|++||.-. ......+.+-...|..+..+.+
T Consensus 552 ~v~esKdY~tKn~Fss~~tTesG--yIa~as~kGDirLyDRig---------------~rAKtalP~lG~aIk~idvta~ 614 (776)
T COG5167 552 KVVESKDYKTKNKFSSGMTTESG--YIAAASRKGDIRLYDRIG---------------KRAKTALPGLGDAIKHIDVTAN 614 (776)
T ss_pred eeeeehhccccccccccccccCc--eEEEecCCCceeeehhhc---------------chhhhcCcccccceeeeEeecC
Confidence 2221 123334455544555 368999999999999654 1122345666778999999999
Q ss_pred CCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 255 DPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 255 ~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
|.+++++|- ..+.+-|+.
T Consensus 615 Gk~ilaTCk---------~yllL~d~~ 632 (776)
T COG5167 615 GKHILATCK---------NYLLLTDVP 632 (776)
T ss_pred CcEEEEeec---------ceEEEEecc
Confidence 999999886 456666655
No 402
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.10 E-value=0.033 Score=29.07 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=26.9
Q ss_pred CCeEEEEEecCCC--cEEEEEcCCCeEEEEEcCC
Q 021657 92 DTVEDVTFCPSSA--QEFCSVGDDSCLILWDARV 123 (309)
Q Consensus 92 ~~v~~~~~~~~~~--~~l~s~~~dg~i~iwd~~~ 123 (309)
+.|.++.|+|... .+|+-+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4689999998764 6888888889999999985
No 403
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.10 E-value=0.46 Score=36.64 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=25.0
Q ss_pred CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 185 ~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
...|-+|+.+.+...+.++.-..+..-+||..+
T Consensus 279 anYigsiA~n~~~glV~lTSP~GN~~vi~da~t 311 (366)
T COG3490 279 ANYIGSIAANRRDGLVALTSPRGNRAVIWDAAT 311 (366)
T ss_pred HhhhhheeecccCCeEEEecCCCCeEEEEEcCC
Confidence 346778898877776666666677788999988
No 404
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.03 E-value=0.27 Score=36.64 Aligned_cols=96 Identities=9% Similarity=0.105 Sum_probs=69.5
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEE--cCCCCc---ceEEEeec----cCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTS---PVIKVEKA----HDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd--~~~~~~---~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
-+.++|+.+.+.+.++-+.+-+|.-|| ..++.. ..+..+.. .....-.+++.- +|++.++.-..++|.-.
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~-eG~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDT-EGNLYVATFNGGTVQKV 238 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEcc-CCcEEEEEecCcEEEEE
Confidence 457889887767777878888888888 444431 11222211 112234566676 88999999999999999
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecC
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 196 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 196 (309)
|..+ ++.+.+++-....|++++|--.
T Consensus 239 dp~t------GK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 239 DPTT------GKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred CCCC------CcEEEEEEcCCCceEEEEecCC
Confidence 9999 9999999988889999999744
No 405
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=96.02 E-value=0.51 Score=36.55 Aligned_cols=118 Identities=18% Similarity=0.094 Sum_probs=79.4
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
..-+.++.++.+ +...+..+.-++|.|+.+...+....+.....--.++.. .|++...+..|.-+.+.|+.+++
T Consensus 86 ~~l~~Dv~vse~---yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v---sGn~aYVadlddgfLivdvsdps 159 (370)
T COG5276 86 RDLFADVRVSEE---YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV---SGNYAYVADLDDGFLIVDVSDPS 159 (370)
T ss_pred hhhhheeEeccc---EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe---cCCEEEEeeccCcEEEEECCCCC
Confidence 345667777653 455666777799999999887666555444444455554 68899888877778899999865
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccc
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
+ .....++......-..++.+-+- -+ .+..|+-+.|-|+.+...
T Consensus 160 s---P~lagrya~~~~d~~~v~ISGn~--AY-vA~~d~GL~ivDVSnp~s 203 (370)
T COG5276 160 S---PQLAGRYALPGGDTHDVAISGNY--AY-VAWRDGGLTIVDVSNPHS 203 (370)
T ss_pred C---ceeeeeeccCCCCceeEEEecCe--EE-EEEeCCCeEEEEccCCCC
Confidence 3 33334444444444667777554 33 556788899999988443
No 406
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=95.99 E-value=0.42 Score=35.29 Aligned_cols=118 Identities=8% Similarity=0.101 Sum_probs=68.0
Q ss_pred CeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC-----cEEEE---eCCc-ccc
Q 021657 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG-----LLNIW---DYEK-VGK 220 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg-----~i~iw---d~~~-~~~ 220 (309)
+.|+.+.....|.+|++.+.. .+++.+|.. -+.|..+.++..|.+++..-.++. .+|+| +... ..+
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~----~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~ 103 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEE----CPLLCTFST-VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENS 103 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCC----CceeEEEcc-hhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCC
Confidence 555555677889999998432 667777774 478999999999998764433322 45654 3221 111
Q ss_pred ccc---------CCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 221 KVE---------QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 221 ~~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.. ..........-.+.++. -+.++.+++-.|-.+.|++++. +++.+|.+..
T Consensus 104 ~v~vRiaG~~v~~~~~~~~~~qleiiElP-l~~~p~ciaCC~~tG~LlVg~~---------~~l~lf~l~~ 164 (215)
T PF14761_consen 104 PVRVRIAGHRVTPSFNESSKDQLEIIELP-LSEPPLCIACCPVTGNLLVGCG---------NKLVLFTLKY 164 (215)
T ss_pred cEEEEEcccccccCCCCccccceEEEEec-CCCCCCEEEecCCCCCEEEEcC---------CEEEEEEEEE
Confidence 111 00000000001122222 2456788888887776665433 6899999874
No 407
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=95.98 E-value=0.016 Score=51.20 Aligned_cols=127 Identities=22% Similarity=0.327 Sum_probs=78.0
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC--CCcc---eEEEeeccCCceeEEEeccC--CCCeEEEEcC
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--GTSP---VIKVEKAHDADLHCVDWNPL--DDNLILTGSA 157 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~---~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~ 157 (309)
..+++..+.|-.+.|-......+. -.-|.+.+||+.. ++.. .++........+.-+.|.|. +..++..+-.
T Consensus 126 ~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~ 203 (1283)
T KOG1916|consen 126 ELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLK 203 (1283)
T ss_pred HHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccC
Confidence 445677888888888543211222 3347789998763 2211 12222333344556666552 4567777778
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEE-----------EEecCCCcEEEEecCCCcEEEEeCCccccc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV-----------QWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~ 221 (309)
+++|++...... ...-+.+|...+..+ .++|||. +||.++.||.++.|.+.-.++.
T Consensus 204 ~~~i~lL~~~ra-------~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGt-v~a~a~~dG~v~f~Qiyi~g~~ 270 (1283)
T KOG1916|consen 204 GGEIRLLNINRA-------LRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGT-VFAWAISDGSVGFYQIYITGKI 270 (1283)
T ss_pred CCceeEeeechH-------HHHHHHhcCCCcccHHHHhhchhhheeeCCCCc-EEEEeecCCccceeeeeeeccc
Confidence 899998777642 123344455544433 3689999 5789999999999998776654
No 408
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.97 E-value=0.29 Score=38.99 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=61.3
Q ss_pred EEEEcCCCeEEEEEcCCCCcceEEEeecc----------CCceeEEEeccCCCCeEEEEcC--------CC--cEEEEec
Q 021657 107 FCSVGDDSCLILWDARVGTSPVIKVEKAH----------DADLHCVDWNPLDDNLILTGSA--------DN--SVRMFDR 166 (309)
Q Consensus 107 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~~~~~--------dg--~i~i~d~ 166 (309)
++--+.+|.|+--|+.............- .+.-.-+++++ ..+.|.+.-. |+ .|-++|+
T Consensus 198 ~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~-~~~rlyvLMh~g~~gsHKdpgteVWv~D~ 276 (342)
T PF06433_consen 198 LYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHA-ASGRLYVLMHQGGEGSHKDPGTEVWVYDL 276 (342)
T ss_dssp EEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEET-TTTEEEEEEEE--TT-TTS-EEEEEEEET
T ss_pred EEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeecc-ccCeEEEEecCCCCCCccCCceEEEEEEC
Confidence 33356778888877765542222222110 12233466666 3333333211 11 4777888
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEE-EEecCCCcEEEEeCCc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF-GSSAEDGLLNIWDYEK 217 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~dg~i~iwd~~~ 217 (309)
.+ .+.+.++.. ..++.+|+.+.+.+-+| +....++.+.+||..+
T Consensus 277 ~t------~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~t 321 (342)
T PF06433_consen 277 KT------HKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAAT 321 (342)
T ss_dssp TT------TEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred CC------CeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcC
Confidence 88 888888874 45688999998776444 4456689999999998
No 409
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.92 E-value=1.1 Score=39.37 Aligned_cols=111 Identities=16% Similarity=0.163 Sum_probs=64.0
Q ss_pred EEEEEecCCCcEEEEEcCC------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc-----EEE
Q 021657 95 EDVTFCPSSAQEFCSVGDD------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS-----VRM 163 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-----i~i 163 (309)
.+++... + .++++||.| ..+..||..+.++.....+............ ++.+.++|+.||. +..
T Consensus 326 ~~~~~~~-~-~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l---~g~iYavGG~dg~~~l~svE~ 400 (571)
T KOG4441|consen 326 VGVAVLN-G-KLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVL---DGKLYAVGGFDGEKSLNSVEC 400 (571)
T ss_pred ccEEEEC-C-EEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEE---CCEEEEEeccccccccccEEE
Confidence 3444444 3 788899988 4577888887775333333332222222222 7889999999974 667
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc------EEEEeCCc
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL------LNIWDYEK 217 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~------i~iwd~~~ 217 (309)
||.++.. ...+..+.. .....+...-+..++++|+.++. +..||..+
T Consensus 401 YDp~~~~----W~~va~m~~---~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t 453 (571)
T KOG4441|consen 401 YDPVTNK----WTPVAPMLT---RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPET 453 (571)
T ss_pred ecCCCCc----ccccCCCCc---ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCC
Confidence 8877633 333333332 23333333334447888886543 56677665
No 410
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=95.88 E-value=0.81 Score=37.69 Aligned_cols=109 Identities=10% Similarity=0.143 Sum_probs=57.1
Q ss_pred CCeEEEEEecCCCcEEEEEc-----------CCC-eEEEEEcCC--CCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 92 DTVEDVTFCPSSAQEFCSVG-----------DDS-CLILWDARV--GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~-----------~dg-~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
.....|+|.++| +++++.. ..+ .|.+++-.. ++......+...-.....+++.+ ++ +++ +..
T Consensus 14 ~~P~~ia~d~~G-~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G-lyV-~~~ 89 (367)
T TIGR02604 14 RNPIAVCFDERG-RLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAV-GG-VYV-ATP 89 (367)
T ss_pred CCCceeeECCCC-CEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEec-CC-EEE-eCC
Confidence 345688999998 6665542 223 677776432 23222344444444568899988 77 444 444
Q ss_pred CCcEEEEecCCCCCCC-CCCce-eeeccC----CCCeeEEEEecCCCcEEEEec
Q 021657 158 DNSVRMFDRRNLTSNG-VGSPI-NKFEGH----SAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~-~~~~~-~~~~~~----~~~v~~~~~~~~~~~l~~~~~ 205 (309)
....++.|........ ..+.+ ..+... ....+.++|.|||. |+++-+
T Consensus 90 ~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G 142 (367)
T TIGR02604 90 PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHG 142 (367)
T ss_pred CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecc
Confidence 4433344543211000 01122 223221 24477899999998 444433
No 411
>PHA02790 Kelch-like protein; Provisional
Probab=95.82 E-value=0.74 Score=39.46 Aligned_cols=100 Identities=7% Similarity=-0.039 Sum_probs=51.1
Q ss_pred cEEEEEcCCC---eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeee
Q 021657 105 QEFCSVGDDS---CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF 181 (309)
Q Consensus 105 ~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 181 (309)
.+.+.||.++ .+..||.++.++...............+.+ ++...+.|+ .+.+||.++.+ +..+..+
T Consensus 364 ~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~---~~~IYv~GG---~~e~ydp~~~~----W~~~~~m 433 (480)
T PHA02790 364 VIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVF---GRRLFLVGR---NAEFYCESSNT----WTLIDDP 433 (480)
T ss_pred EEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEE---CCEEEEECC---ceEEecCCCCc----EeEcCCC
Confidence 7778877653 467888877664322222111112222222 566777764 57789887632 3333333
Q ss_pred ccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCc
Q 021657 182 EGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEK 217 (309)
Q Consensus 182 ~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~ 217 (309)
....... +++.. +++ +++.|+.+ ..+..||...
T Consensus 434 ~~~r~~~-~~~v~-~~~-IYviGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 434 IYPRDNP-ELIIV-DNK-LLLIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred CCCcccc-EEEEE-CCE-EEEECCcCCCcccceEEEEECCC
Confidence 3222222 22222 344 67788754 3455666554
No 412
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.79 E-value=0.63 Score=35.75 Aligned_cols=114 Identities=14% Similarity=0.021 Sum_probs=69.5
Q ss_pred CeEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
-...+.|..++ .++-+.+.-| .|+.+|+.+++......+. ..----.++.. ++......=.++...+||..+
T Consensus 46 FTQGL~~~~~g-~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~-~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~t-- 119 (264)
T PF05096_consen 46 FTQGLEFLDDG-TLYESTGLYGQSSLRKVDLETGKVLQSVPLP-PRYFGEGITIL--GDKLYQLTWKEGTGFVYDPNT-- 119 (264)
T ss_dssp EEEEEEEEETT-EEEEEECSTTEEEEEEEETTTSSEEEEEE-T-TT--EEEEEEE--TTEEEEEESSSSEEEEEETTT--
T ss_pred cCccEEecCCC-EEEEeCCCCCcEEEEEEECCCCcEEEEEECC-ccccceeEEEE--CCEEEEEEecCCeEEEEcccc--
Confidence 35677887777 7778887766 7999999998832222221 12222334443 345555666789999999998
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccc
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
.+.+.++.-. +.=..++ .++..|+++ .....++++|-.++..
T Consensus 120 ----l~~~~~~~y~-~EGWGLt--~dg~~Li~S-DGS~~L~~~dP~~f~~ 161 (264)
T PF05096_consen 120 ----LKKIGTFPYP-GEGWGLT--SDGKRLIMS-DGSSRLYFLDPETFKE 161 (264)
T ss_dssp ----TEEEEEEE-S-SS--EEE--ECSSCEEEE--SSSEEEEE-TTT-SE
T ss_pred ----ceEEEEEecC-CcceEEE--cCCCEEEEE-CCccceEEECCcccce
Confidence 7778777643 3334455 567766644 4466788888776443
No 413
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.65 E-value=0.64 Score=34.79 Aligned_cols=99 Identities=13% Similarity=0.202 Sum_probs=61.4
Q ss_pred eeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC----CCcceeeEEEccCCCeEEEEec
Q 021657 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG----HRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 188 v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~s 263 (309)
-+.++|+.+.+.++..-+.+-.|.-||.....-... ....++.+.. .....-.++...+|...+++-+
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~s--------nr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~n 231 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLS--------NRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFN 231 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCccccc--------CcceeEEeccCCCcCCCCCCcceEccCCcEEEEEec
Confidence 467899988887777888888888888544221111 0112222221 1111233444555554443332
Q ss_pred CCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 264 DDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 264 ~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
. ++|...|.. +++.+.+++-....|++++|-
T Consensus 232 -g-------~~V~~~dp~------tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 232 -G-------GTVQKVDPT------TGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred -C-------cEEEEECCC------CCcEEEEEEcCCCceEEEEec
Confidence 2 799999998 899999988888899999883
No 414
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=95.38 E-value=0.48 Score=39.67 Aligned_cols=139 Identities=13% Similarity=0.138 Sum_probs=85.4
Q ss_pred CCCCCCCcccCCCCCcCcccccccccCCeEEEEEecCC-------CcEEEEEcCCCeEEEEEcCCCCcceEEE-e--ecc
Q 021657 66 PKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSS-------AQEFCSVGDDSCLILWDARVGTSPVIKV-E--KAH 135 (309)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~--~~~ 135 (309)
.+.....++-.+...++.+..+.-|... -+.|.|.. .+.|+--+ +..|.-.|.+......... . ...
T Consensus 485 dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS-~~svFrIDPR~~gNKi~v~esKdY~t 561 (776)
T COG5167 485 DGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLS-DYSVFRIDPRARGNKIKVVESKDYKT 561 (776)
T ss_pred cCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeec-ccceEEecccccCCceeeeeehhccc
Confidence 3444455566667777777777666654 46777753 13344444 4445444765443211111 1 111
Q ss_pred CCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 136 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
.....|..-. ...++++++..|-|++||.-. .+....+.+....|..|..+.+|.+++|+| ...+.+-|+
T Consensus 562 Kn~Fss~~tT--esGyIa~as~kGDirLyDRig------~rAKtalP~lG~aIk~idvta~Gk~ilaTC--k~yllL~d~ 631 (776)
T COG5167 562 KNKFSSGMTT--ESGYIAAASRKGDIRLYDRIG------KRAKTALPGLGDAIKHIDVTANGKHILATC--KNYLLLTDV 631 (776)
T ss_pred cccccccccc--cCceEEEecCCCceeeehhhc------chhhhcCcccccceeeeEeecCCcEEEEee--cceEEEEec
Confidence 2223333222 467999999999999999764 344445667778899999999999988666 467888887
Q ss_pred Cc
Q 021657 216 EK 217 (309)
Q Consensus 216 ~~ 217 (309)
+-
T Consensus 632 ~i 633 (776)
T COG5167 632 PI 633 (776)
T ss_pred cc
Confidence 64
No 415
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=95.32 E-value=1.1 Score=35.20 Aligned_cols=147 Identities=14% Similarity=0.185 Sum_probs=80.3
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCcee-----
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN----- 179 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----- 179 (309)
..|+.|.++| +.+++...... .... .+...|..+...| +-+.|++-+ |+.++++++.............
T Consensus 8 ~~L~vGt~~G-l~~~~~~~~~~-~~~i--~~~~~I~ql~vl~-~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~ 81 (275)
T PF00780_consen 8 DRLLVGTEDG-LYVYDLSDPSK-PTRI--LKLSSITQLSVLP-ELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR 81 (275)
T ss_pred CEEEEEECCC-EEEEEecCCcc-ceeE--eecceEEEEEEec-ccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence 6788888998 99999832221 2222 2334499999999 667666654 5999999998743221111000
Q ss_pred ----eeccCCCCeeEEE--EecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEcc
Q 021657 180 ----KFEGHSAAVLCVQ--WSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNA 253 (309)
Q Consensus 180 ----~~~~~~~~v~~~~--~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 253 (309)
.+. ....+...+ -...+...++.+. ...|.+|.......... ....++. -...+.+++|.+
T Consensus 82 ~~~~~~~-~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~----------~~~ke~~-lp~~~~~i~~~~ 148 (275)
T PF00780_consen 82 SLPTKLP-ETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFS----------KLLKEIS-LPDPPSSIAFLG 148 (275)
T ss_pred ccccccc-ccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCccccc----------ceeEEEE-cCCCcEEEEEeC
Confidence 111 122344444 1233333343443 45899998876211110 1222222 236778888883
Q ss_pred CCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 254 SDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 254 ~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.++++.. ....+.|+.
T Consensus 149 --~~i~v~~~---------~~f~~idl~ 165 (275)
T PF00780_consen 149 --NKICVGTS---------KGFYLIDLN 165 (275)
T ss_pred --CEEEEEeC---------CceEEEecC
Confidence 44444332 356677776
No 416
>PHA03098 kelch-like protein; Provisional
Probab=95.30 E-value=1.1 Score=39.12 Aligned_cols=103 Identities=6% Similarity=0.078 Sum_probs=51.8
Q ss_pred cEEEEEcCC------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC--------cEEEEecCCCC
Q 021657 105 QEFCSVGDD------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN--------SVRMFDRRNLT 170 (309)
Q Consensus 105 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~ 170 (309)
.+++.||.+ ..+..||..+.++............. ++.. . ++..++.|+.++ .+..||..+.+
T Consensus 391 ~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~~-~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 391 LIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAIY-H-DGKIYVIGGISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred EEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEEE-E-CCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence 677777632 45888998876643322221111111 2222 2 566777776532 37888987632
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCc
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEK 217 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~ 217 (309)
...+..+.........+.+ ++. +++.|+.+ ..+.+||...
T Consensus 468 ----W~~~~~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 468 ----WTELSSLNFPRINASLCIF--NNK-IYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred ----eeeCCCCCcccccceEEEE--CCE-EEEEcCCcCCcccceeEEEeCCC
Confidence 2222222211111122222 444 66677654 4677777765
No 417
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.28 E-value=0.73 Score=38.06 Aligned_cols=108 Identities=9% Similarity=0.163 Sum_probs=73.7
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
...++|.++.|++|. +.+|.--.+.+|.+.+....+.. .....+.....|....|.. + .-+|.-...| +.+|-.
T Consensus 64 ~d~G~I~SIkFSlDn-kilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~-s-~e~A~i~~~G-~e~y~v 139 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDN-KILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTS-S-TEIAFITDQG-IEFYQV 139 (657)
T ss_pred cCCCceeEEEeccCc-ceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEec-C-eeEEEEecCC-eEEEEE
Confidence 345799999999998 88999999999999997433311 1222334456699999986 4 4455554444 666665
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
..+ .+.++..+.++..|+--.|.++-+-++.+.+
T Consensus 140 ~pe-----krslRlVks~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 140 LPE-----KRSLRLVKSHNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred chh-----hhhhhhhhhcccCccEEEEccccceEeeecc
Confidence 543 4556666778888888889888775443433
No 418
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=95.26 E-value=0.62 Score=38.44 Aligned_cols=168 Identities=13% Similarity=0.067 Sum_probs=94.1
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCC----cee-EEEeccCCCCeEEEEcCCCcE
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA----DLH-CVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~v~-~~~~~~~~~~~l~~~~~dg~i 161 (309)
+......|..+-..|+| +.+..-+. ..+.++++.+......+......+ .|+ ++..-. .+.-+.+++.||.|
T Consensus 216 L~~~~~~v~qllL~Pdg-~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~-Gg~SLLv~~~dG~v 292 (733)
T COG4590 216 LSVPFSDVSQLLLTPDG-KTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLS-GGFSLLVVHEDGLV 292 (733)
T ss_pred cCCCccchHhhEECCCC-CEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHh-CceeEEEEcCCCce
Confidence 44445677788889999 55544433 678888887655323322222122 222 222223 57778889999988
Q ss_pred EEE-ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 162 RMF-DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 162 ~i~-d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
.-| |.+.... +....++.++-...++..+.-..+ +.-+++-+.+|.+.++.-...... ++ .
T Consensus 293 sQWFdvr~~~~-p~l~h~R~f~l~pa~~~~l~pe~~-rkgF~~l~~~G~L~~f~st~~~~l--------------L~--~ 354 (733)
T COG4590 293 SQWFDVRRDGQ-PHLNHIRNFKLAPAEVQFLLPETN-RKGFYSLYRNGTLQSFYSTSEKLL--------------LF--E 354 (733)
T ss_pred eeeeeeecCCC-CcceeeeccccCcccceeeccccc-cceEEEEcCCCceeeeecccCcce--------------eh--h
Confidence 766 6665321 112333344433344443332223 335667788888887765441111 11 1
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
.--+.+.-+++||.+.+++.- | .|.++++.+++..
T Consensus 355 ~~~~~~~~~~~Sp~~~~Ll~e---~------~gki~~~~l~Nr~ 389 (733)
T COG4590 355 RAYQAPQLVAMSPNQAYLLSE---D------QGKIRLAQLENRN 389 (733)
T ss_pred hhhcCcceeeeCcccchheee---c------CCceEEEEecCCC
Confidence 112245668899988887632 1 2789999998654
No 419
>PRK10115 protease 2; Provisional
Probab=95.17 E-value=2.3 Score=38.31 Aligned_cols=73 Identities=10% Similarity=0.016 Sum_probs=41.3
Q ss_pred EEEEEecCCCcEEEEEcCC-----CeEEEEEcCCCCcceEEEeeccCCcee-EEEeccCCCCeEEEEcC---CCcEEEEe
Q 021657 95 EDVTFCPSSAQEFCSVGDD-----SCLILWDARVGTSPVIKVEKAHDADLH-CVDWNPLDDNLILTGSA---DNSVRMFD 165 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~---dg~i~i~d 165 (309)
..++|.+++..++++...+ ..|..+++.++.......+........ ....+. ++.+++..+. ++.+.+++
T Consensus 175 ~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~-d~~~l~i~~~~~~~~~~~l~~ 253 (686)
T PRK10115 175 PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTT-SKHYVVIHLASATTSEVLLLD 253 (686)
T ss_pred eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcC-CCCEEEEEEECCccccEEEEE
Confidence 4589999986666665432 367888888773223334433333333 223343 5665554433 35788888
Q ss_pred cCC
Q 021657 166 RRN 168 (309)
Q Consensus 166 ~~~ 168 (309)
...
T Consensus 254 ~~~ 256 (686)
T PRK10115 254 AEL 256 (686)
T ss_pred CcC
Confidence 643
No 420
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=94.98 E-value=1 Score=33.30 Aligned_cols=106 Identities=15% Similarity=0.300 Sum_probs=66.1
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC------cEEEE-ecCCCCCCCCCCc
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN------SVRMF-DRRNLTSNGVGSP 177 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~i~-d~~~~~~~~~~~~ 177 (309)
.+|++ .....|.+|++.+...+....+.. -+.|..+.++. .|+++++--.+. .+|+| +.+..... ..+
T Consensus 30 ~Lfva-~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~-~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~--~~~ 104 (215)
T PF14761_consen 30 ALFVA-ASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSE-AGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEE--NSP 104 (215)
T ss_pred eEEEE-cCCCEEEEEEcccCCCceeEEEcc-hhheeEEEecc-ccceEEEEEeecCCccceEEEEEEEhhhhccc--CCc
Confidence 44443 556789999998666556666654 47899999999 999999975432 45654 22221000 111
Q ss_pred ee-eecc---------------------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 178 IN-KFEG---------------------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 178 ~~-~~~~---------------------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+. ++.+ .+.++.+++..|-...|+ .|+ ++.+.+|.+..
T Consensus 105 v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~Ll-Vg~-~~~l~lf~l~~ 164 (215)
T PF14761_consen 105 VRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLL-VGC-GNKLVLFTLKY 164 (215)
T ss_pred EEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEE-EEc-CCEEEEEEEEE
Confidence 11 1111 234667888888655555 666 57899999876
No 421
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.98 E-value=1.2 Score=36.98 Aligned_cols=136 Identities=10% Similarity=0.164 Sum_probs=79.4
Q ss_pred eEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 140 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 140 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
+.+-|+. .+..+.+...|.+.-|-...+.. .-++..-...+++|.++.|++|.+ ++|.--.++.|.+++.....
T Consensus 26 ngvFfDD--aNkqlfavrSggatgvvvkgpnd---DVpiSfdm~d~G~I~SIkFSlDnk-ilAVQR~~~~v~f~nf~~d~ 99 (657)
T KOG2377|consen 26 NGVFFDD--ANKQLFAVRSGGATGVVVKGPND---DVPISFDMDDKGEIKSIKFSLDNK-ILAVQRTSKTVDFCNFIPDN 99 (657)
T ss_pred cceeecc--CcceEEEEecCCeeEEEEeCCCC---CCCceeeecCCCceeEEEeccCcc-eEEEEecCceEEEEecCCCc
Confidence 3444543 33333333455566666554331 223333333567999999999999 57888889999999985422
Q ss_pred ccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhccc
Q 021657 220 KKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFK 299 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~ 299 (309)
..+ ....+.+..+..|....|+.+...-++ ++ .-+-+|.+.. ..+.++-++.|.
T Consensus 100 ~~l-----------~~~~~ck~k~~~IlGF~W~~s~e~A~i--~~--------~G~e~y~v~p-----ekrslRlVks~~ 153 (657)
T KOG2377|consen 100 SQL-----------EYTQECKTKNANILGFCWTSSTEIAFI--TD--------QGIEFYQVLP-----EKRSLRLVKSHN 153 (657)
T ss_pred hhh-----------HHHHHhccCcceeEEEEEecCeeEEEE--ec--------CCeEEEEEch-----hhhhhhhhhhcc
Confidence 211 122233344556889999876443232 22 3577888773 455666666666
Q ss_pred ceEEEeee
Q 021657 300 AHVISCTS 307 (309)
Q Consensus 300 ~~v~~~~~ 307 (309)
..|.--.|
T Consensus 154 ~nvnWy~y 161 (657)
T KOG2377|consen 154 LNVNWYMY 161 (657)
T ss_pred cCccEEEE
Confidence 65544443
No 422
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.96 E-value=1.7 Score=35.76 Aligned_cols=101 Identities=13% Similarity=0.149 Sum_probs=51.6
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC-----CcceE-EEeec----cCCceeEEEeccCCCCeEEEEcCC----
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-----TSPVI-KVEKA----HDADLHCVDWNPLDDNLILTGSAD---- 158 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~-~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d---- 158 (309)
....+++.+++ ++++ ......++.|.... +...+ ..+.. +......++|.| ++.+.++-+..
T Consensus 73 ~p~Gi~~~~~G--lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gp-DG~LYv~~G~~~~~~ 148 (367)
T TIGR02604 73 MVTGLAVAVGG--VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGP-DGWLYFNHGNTLASK 148 (367)
T ss_pred CccceeEecCC--EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECC-CCCEEEecccCCCce
Confidence 45788888876 4443 44433334454321 21111 11221 123477899999 88766654421
Q ss_pred ---------------CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec
Q 021657 159 ---------------NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 159 ---------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
|.|.-+|... ..+..+...-.....++|+++|. ++++-.
T Consensus 149 ~~~~~~~~~~~~~~~g~i~r~~pdg-------~~~e~~a~G~rnp~Gl~~d~~G~-l~~tdn 202 (367)
T TIGR02604 149 VTRPGTSDESRQGLGGGLFRYNPDG-------GKLRVVAHGFQNPYGHSVDSWGD-VFFCDN 202 (367)
T ss_pred eccCCCccCcccccCceEEEEecCC-------CeEEEEecCcCCCccceECCCCC-EEEEcc
Confidence 3344444443 22223322233456899999998 454433
No 423
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.88 E-value=1 Score=40.42 Aligned_cols=82 Identities=20% Similarity=0.303 Sum_probs=51.7
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCC-CCCC---CCCc---eeee--------ccCCCCeeEEEEecCC---C
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL-TSNG---VGSP---INKF--------EGHSAAVLCVQWSPDK---S 198 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~---~~~~---~~~~--------~~~~~~v~~~~~~~~~---~ 198 (309)
..|..+.++| +|.+++..+..| |.|..+... ...+ .++. .+++ ......|..+.|+|.+ .
T Consensus 85 f~v~~i~~n~-~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 85 FEVHQISLNP-TGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred eeEEEEEECC-CCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 4688999999 999999888766 444444321 0000 0111 1111 1234578899999974 6
Q ss_pred cEEEEecCCCcEEEEeCCccccc
Q 021657 199 SVFGSSAEDGLLNIWDYEKVGKK 221 (309)
Q Consensus 199 ~l~~~~~~dg~i~iwd~~~~~~~ 221 (309)
+| +.-+.|+.+++||+.....+
T Consensus 163 ~l-~vLtsdn~lR~y~~~~~~~p 184 (717)
T PF10168_consen 163 HL-VVLTSDNTLRLYDISDPQHP 184 (717)
T ss_pred eE-EEEecCCEEEEEecCCCCCC
Confidence 65 46677999999999764443
No 424
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=94.82 E-value=0.58 Score=38.80 Aligned_cols=88 Identities=14% Similarity=0.197 Sum_probs=56.1
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCc-eeEEEeccCC----------------C
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDWNPLD----------------D 149 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~----------------~ 149 (309)
+......+.+++.+|.+ .+.++...=|.|.++|+..+. .++..++-.+. +.-+...... .
T Consensus 303 l~D~~R~~~~i~~sP~~-~laA~tDslGRV~LiD~~~~~--vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~ 379 (415)
T PF14655_consen 303 LPDSKREGESICLSPSG-RLAAVTDSLGRVLLIDVARGI--VVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFA 379 (415)
T ss_pred eccCCceEEEEEECCCC-CEEEEEcCCCcEEEEECCCCh--hhhhhccCccceEEEEEeecccccccccccccCCCCcce
Confidence 44455678999999997 888888888999999998776 44444443332 1111110000 1
Q ss_pred C-eEEEEcCCCcEEEEecCCCCCCCCCCceeeecc
Q 021657 150 N-LILTGSADNSVRMFDRRNLTSNGVGSPINKFEG 183 (309)
Q Consensus 150 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 183 (309)
. +++-+-.-|.|.||++++ +..+..+..
T Consensus 380 l~LvIyaprRg~lEvW~~~~------g~Rv~a~~v 408 (415)
T PF14655_consen 380 LFLVIYAPRRGILEVWSMRQ------GPRVAAFNV 408 (415)
T ss_pred EEEEEEeccCCeEEEEecCC------CCEEEEEEe
Confidence 1 223345678999999998 777766654
No 425
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.80 E-value=0.3 Score=36.73 Aligned_cols=82 Identities=5% Similarity=0.120 Sum_probs=50.7
Q ss_pred EECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeE
Q 021657 16 AMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVE 95 (309)
Q Consensus 16 ~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 95 (309)
.+..++.+|++-+.+|.+++||+.+................ .. ... ......|.
T Consensus 17 ~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~----------------------~~--~~~--~~~~~~i~ 70 (219)
T PF07569_consen 17 FLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNS----------------------SP--VSD--KSSSPNIT 70 (219)
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcc----------------------cc--ccc--CCCCCcEE
Confidence 35567899999999999999999976443333110000000 00 000 03556788
Q ss_pred EEEEecCCCcEEEEEcCCCeEEEEEcCCCC
Q 021657 96 DVTFCPSSAQEFCSVGDDSCLILWDARVGT 125 (309)
Q Consensus 96 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 125 (309)
.+..+.+| .-+++-+ +|..+.|+..-+.
T Consensus 71 ~~~lt~~G-~PiV~ls-ng~~y~y~~~L~~ 98 (219)
T PF07569_consen 71 SCSLTSNG-VPIVTLS-NGDSYSYSPDLGC 98 (219)
T ss_pred EEEEcCCC-CEEEEEe-CCCEEEeccccce
Confidence 88898887 5555544 5788999876554
No 426
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=94.79 E-value=2.4 Score=36.48 Aligned_cols=71 Identities=13% Similarity=0.237 Sum_probs=46.1
Q ss_pred EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-CCcEEEEecCC
Q 021657 95 EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRN 168 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~ 168 (309)
..+.|+|.. .+|+.-.....=.+++++.........+ ...+-|.|.+|.+ +|+.|+++-. .=.-++||-..
T Consensus 116 QGCVWHPk~-~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~-DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 116 QGCVWHPKK-AILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTK-DGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CcccccCCC-ceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecC-cCCEEEEEeCCeEEEEEecCch
Confidence 456799987 5565554444445667766554343334 4567899999999 8887766533 33567888654
No 427
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.57 E-value=0.69 Score=38.92 Aligned_cols=83 Identities=12% Similarity=0.136 Sum_probs=50.3
Q ss_pred ceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCC---CCCCceeeec-----------cCCCCeeEEEEecCC---CcE
Q 021657 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN---GVGSPINKFE-----------GHSAAVLCVQWSPDK---SSV 200 (309)
Q Consensus 138 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~-----------~~~~~v~~~~~~~~~---~~l 200 (309)
.|..+..++ .|..++..+.+|.+.++=.+.-... ..+++..... ...-.+..++|+|+. .+|
T Consensus 105 eV~~vl~s~-~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 105 EVYQVLLSP-TGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEecC-CCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 567788899 8998888888986655432210000 0022221111 112346678999986 444
Q ss_pred EEEecCCCcEEEEeCCcccccc
Q 021657 201 FGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 201 ~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
..-+.|+.|++||+.......
T Consensus 184 -~iL~sdnviRiy~lS~~tely 204 (741)
T KOG4460|consen 184 -VLLTSDNVIRIYSLSEPTELY 204 (741)
T ss_pred -EEEecCcEEEEEecCCcchhh
Confidence 466679999999998855543
No 428
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=94.39 E-value=0.26 Score=25.17 Aligned_cols=30 Identities=23% Similarity=0.476 Sum_probs=22.6
Q ss_pred CCCCeeEEEEecCCCcEEEEecCC--CcEEEE
Q 021657 184 HSAAVLCVQWSPDKSSVFGSSAED--GLLNIW 213 (309)
Q Consensus 184 ~~~~v~~~~~~~~~~~l~~~~~~d--g~i~iw 213 (309)
....-....|+|||++++.++..+ |...||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 345667889999999988788777 777766
No 429
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=94.38 E-value=0.011 Score=48.45 Aligned_cols=134 Identities=14% Similarity=0.304 Sum_probs=89.8
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
.......|.| ++.-++.++.+..+..||-. ++.+.... ..+....++|..++..+++.+-..+.+.+||+.
T Consensus 35 v~pi~~~w~~-e~~nlavaca~tiv~~YD~a-------gq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n 105 (615)
T KOG2247|consen 35 VGPIIHRWRP-EGHNLAVACANTIVIYYDKA-------GQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVN 105 (615)
T ss_pred cccceeeEec-CCCceehhhhhhHHHhhhhh-------cceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhh
Confidence 3444667888 56568888888899999865 34444443 234556789999998877788889999999998
Q ss_pred cccccccCCCCCcCCCCceeeeecC-CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAG-HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL 295 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 295 (309)
+.....- .+.+ |.... +.|++..+.++ .|-..|.+.|++-. ..+.+..+
T Consensus 106 ~eytqqL--------------E~gg~~s~sl--l~wsKg~~el~--------ig~~~gn~viynhg------tsR~iiv~ 155 (615)
T KOG2247|consen 106 SEYTQQL--------------ESGGTSSKSL--LAWSKGTPELV--------IGNNAGNIVIYNHG------TSRRIIVM 155 (615)
T ss_pred hhhHHHH--------------hccCcchHHH--HhhccCCcccc--------ccccccceEEEecc------chhhhhhh
Confidence 7221110 1111 22222 67888666655 44455899999988 56666666
Q ss_pred hcccceEEEeeeCC
Q 021657 296 EKFKAHVISCTSKP 309 (309)
Q Consensus 296 ~~h~~~v~~~~~~P 309 (309)
-.|..+++++++.|
T Consensus 156 Gkh~RRgtq~av~l 169 (615)
T KOG2247|consen 156 GKHQRRGTQIAVTL 169 (615)
T ss_pred cccccceeEEEecc
Confidence 55888888888754
No 430
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=94.28 E-value=1.1 Score=39.86 Aligned_cols=125 Identities=10% Similarity=0.062 Sum_probs=74.5
Q ss_pred CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEE
Q 021657 20 TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTF 99 (309)
Q Consensus 20 ~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 99 (309)
....|+.|..||.|.+|.++.-.............. ......++...+. -...++++++
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~--------------------~~r~~i~P~f~~~-v~~SaWGLdI 171 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSG--------------------FSRLKIKPFFHLR-VGASAWGLDI 171 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccc--------------------cccccCCCCeEee-cCCceeEEEE
Confidence 456799999999999998865321111100000000 0001112222222 3347899999
Q ss_pred e--cCCCcEEEEEcCCCeEEEEEcCCCCcce-EEEeeccCCceeEEEeccCC----CC-eEEEEcCCCcEEEEec
Q 021657 100 C--PSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPLD----DN-LILTGSADNSVRMFDR 166 (309)
Q Consensus 100 ~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~----~~-~l~~~~~dg~i~i~d~ 166 (309)
+ ... +++|++++...|.||-........ ......+...|.+++|-+.+ |. .+++++-.|.+.+|++
T Consensus 172 h~~~~~-rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 172 HDYKKS-RLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EecCcc-eEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 8 555 788888888888888665422111 11122366789999997632 22 7888899999999888
No 431
>PHA02790 Kelch-like protein; Provisional
Probab=94.25 E-value=3 Score=35.88 Aligned_cols=102 Identities=5% Similarity=-0.053 Sum_probs=51.2
Q ss_pred CCCcEEEEEcCC--CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC---cEEEEecCCCCCCCCCC
Q 021657 102 SSAQEFCSVGDD--SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN---SVRMFDRRNLTSNGVGS 176 (309)
Q Consensus 102 ~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~ 176 (309)
++ .+.+.|+.+ ..+..||..++++.....+.........+.. ++...+.|+.++ .+..||.++.. ..
T Consensus 318 ~~-~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~---~g~IYviGG~~~~~~~ve~ydp~~~~----W~ 389 (480)
T PHA02790 318 NN-KLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASI---NNVIYVIGGHSETDTTTEYLLPNHDQ----WQ 389 (480)
T ss_pred CC-EEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEE---CCEEEEecCcCCCCccEEEEeCCCCE----EE
Confidence 44 777777754 3577888766653222222211111122222 678888887654 46678877532 22
Q ss_pred ceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 177 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+..+....... +++ .-++. +++.|+ .+.+||.++
T Consensus 390 ~~~~m~~~r~~~-~~~-~~~~~-IYv~GG---~~e~ydp~~ 424 (480)
T PHA02790 390 FGPSTYYPHYKS-CAL-VFGRR-LFLVGR---NAEFYCESS 424 (480)
T ss_pred eCCCCCCccccc-eEE-EECCE-EEEECC---ceEEecCCC
Confidence 222222111111 222 23344 676764 567888765
No 432
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.24 E-value=0.57 Score=35.29 Aligned_cols=68 Identities=6% Similarity=0.069 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCCCCCCCceee-ec-------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINK-FE-------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 148 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~-------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.++++++-+.+|.+++||+.+....-....+.. +. .....|..+.++.+|.- +++- .+|..+.|+...
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~P-iV~l-sng~~y~y~~~L 96 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVP-IVTL-SNGDSYSYSPDL 96 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCE-EEEE-eCCCEEEecccc
Confidence 678899999999999999998432111101111 11 24567888999988874 4344 468889998765
No 433
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=94.10 E-value=2.6 Score=34.14 Aligned_cols=51 Identities=12% Similarity=0.241 Sum_probs=32.7
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-ceEEEe----eccCCceeEEEecc
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-PVIKVE----KAHDADLHCVDWNP 146 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~----~~~~~~v~~~~~~~ 146 (309)
..+.|+|.|++ .+|++ ...|.|++++ ..+.. ..+... .........++++|
T Consensus 3 ~P~~~a~~pdG-~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p 58 (331)
T PF07995_consen 3 NPRSMAFLPDG-RLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHP 58 (331)
T ss_dssp SEEEEEEETTS-CEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-T
T ss_pred CceEEEEeCCC-cEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceecc
Confidence 35789999998 66665 5699999999 33332 112221 23345678999998
No 434
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=93.88 E-value=0.29 Score=24.96 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=20.9
Q ss_pred ccCCCCCcceEEEEECCCCCEEE-EecCC--CcEEEE
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVL-SGGKD--KSVVLW 36 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~-t~~~d--g~i~vw 36 (309)
.+.-..+ .-....|+|||+.|+ ++..+ |.-.||
T Consensus 3 ~~t~~~~-~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 3 QLTNSPG-DDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp EES-SSS-SEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CcccCCc-cccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3444444 557899999999877 45555 666666
No 435
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=93.63 E-value=3.3 Score=33.90 Aligned_cols=154 Identities=16% Similarity=0.147 Sum_probs=74.0
Q ss_pred EEecCCCcEEEEEcCCCe--EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCC
Q 021657 98 TFCPSSAQEFCSVGDDSC--LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175 (309)
Q Consensus 98 ~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 175 (309)
+|.++|.++|+.+..||. +.+.|+.+++ ..+.-.+.........++| ..+.++-.-....++-.|+++ .
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~--i~QLTdg~g~~~~g~~~s~-~~~~~~Yv~~~~~l~~vdL~T------~ 112 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGE--ITQLTDGPGDNTFGGFLSP-DDRALYYVKNGRSLRRVDLDT------L 112 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-E--EEE---SS-B-TTT-EE-T-TSSEEEEEETTTEEEEEETTT-------
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCE--EEECccCCCCCccceEEec-CCCeEEEEECCCeEEEEECCc------C
Confidence 677888777777776664 5566777776 3333222222333566778 566654444456888899998 5
Q ss_pred CceeeeccCCCCeeEEEEe--cCCCcEEEEecC----C-------------------CcEEEEeCCcccccccCCCCCcC
Q 021657 176 SPINKFEGHSAAVLCVQWS--PDKSSVFGSSAE----D-------------------GLLNIWDYEKVGKKVEQGPRTTN 230 (309)
Q Consensus 176 ~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~----d-------------------g~i~iwd~~~~~~~~~~~~~~~~ 230 (309)
+....+......+-...|. .++.. + ++.. | ..|.--|+++
T Consensus 113 e~~~vy~~p~~~~g~gt~v~n~d~t~-~-~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~t------------- 177 (386)
T PF14583_consen 113 EERVVYEVPDDWKGYGTWVANSDCTK-L-VGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKT------------- 177 (386)
T ss_dssp -EEEEEE--TTEEEEEEEEE-TTSSE-E-EEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT-------------
T ss_pred cEEEEEECCcccccccceeeCCCccE-E-EEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCC-------------
Confidence 5444455455555445554 34543 3 2321 0 0111111111
Q ss_pred CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCe-EEEEEccc
Q 021657 231 YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGT-LQIWRMSD 282 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~-v~vw~~~~ 282 (309)
.....+......+.-+.|+|.++.+++-|-+ |-.|.. -+||=++.
T Consensus 178 ---G~~~~v~~~~~wlgH~~fsP~dp~li~fCHE----Gpw~~Vd~RiW~i~~ 223 (386)
T PF14583_consen 178 ---GERKVVFEDTDWLGHVQFSPTDPTLIMFCHE----GPWDLVDQRIWTINT 223 (386)
T ss_dssp -----EEEEEEESS-EEEEEEETTEEEEEEEEE-----S-TTTSS-SEEEEET
T ss_pred ---CceeEEEecCccccCcccCCCCCCEEEEecc----CCcceeceEEEEEEc
Confidence 1112222334567888999999988877653 344443 36777763
No 436
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=93.63 E-value=5.8 Score=36.48 Aligned_cols=154 Identities=8% Similarity=0.088 Sum_probs=98.0
Q ss_pred eEEEEEecCCCcEEEEEcC----------CCeEEEEEcCCCCcceEEEee--ccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 94 VEDVTFCPSSAQEFCSVGD----------DSCLILWDARVGTSPVIKVEK--AHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
|.++.|..+.+.+++.|.. .|.|.++....... ..... .-++.+.++..- +++++|. -...|
T Consensus 777 i~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~--L~~v~e~~v~Gav~aL~~f--ngkllA~--In~~v 850 (1096)
T KOG1897|consen 777 IISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNS--LELVAETVVKGAVYALVEF--NGKLLAG--INQSV 850 (1096)
T ss_pred eeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCc--eeeeeeeeeccceeehhhh--CCeEEEe--cCcEE
Confidence 4455577764467777652 58888888877331 22222 223455555432 5666654 45689
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++|+..+ .+.++.-..+..++..+...-.|.. ++.|.-=+.+.+-..+...... ......-
T Consensus 851 rLye~t~------~~eLr~e~~~~~~~~aL~l~v~gde-I~VgDlm~Sitll~y~~~eg~f------------~evArD~ 911 (1096)
T KOG1897|consen 851 RLYEWTT------ERELRIECNISNPIIALDLQVKGDE-IAVGDLMRSITLLQYKGDEGNF------------EEVARDY 911 (1096)
T ss_pred EEEEccc------cceehhhhcccCCeEEEEEEecCcE-EEEeeccceEEEEEEeccCCce------------EEeehhh
Confidence 9999988 6667766777888999999988886 5688877888777666522111 1223345
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+..+++++.+-.++.++.+. .+|.+++-..+
T Consensus 912 ~p~Wmtaveil~~d~ylgae---------~~gNlf~v~~d 942 (1096)
T KOG1897|consen 912 NPNWMTAVEILDDDTYLGAE---------NSGNLFTVRKD 942 (1096)
T ss_pred CccceeeEEEecCceEEeec---------ccccEEEEEec
Confidence 67788888887765544432 33666666655
No 437
>PRK10115 protease 2; Provisional
Probab=93.59 E-value=5.2 Score=36.20 Aligned_cols=117 Identities=10% Similarity=0.170 Sum_probs=66.5
Q ss_pred ceeEEEeccCCCCeEEEEcCC-C----cEEEEecCCCCCCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCC----
Q 021657 138 DLHCVDWNPLDDNLILTGSAD-N----SVRMFDRRNLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAED---- 207 (309)
Q Consensus 138 ~v~~~~~~~~~~~~l~~~~~d-g----~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~d---- 207 (309)
.+..+.|+| ++++|+.+... | .|++.|+.+ +..+.. +..- . ..++|.+|++.++.+...+
T Consensus 128 ~l~~~~~Sp-dg~~la~~~d~~G~E~~~l~v~d~~t------g~~l~~~i~~~--~-~~~~w~~D~~~~~y~~~~~~~~~ 197 (686)
T PRK10115 128 TLGGMAITP-DNTIMALAEDFLSRRQYGIRFRNLET------GNWYPELLDNV--E-PSFVWANDSWTFYYVRKHPVTLL 197 (686)
T ss_pred EEeEEEECC-CCCEEEEEecCCCcEEEEEEEEECCC------CCCCCccccCc--c-eEEEEeeCCCEEEEEEecCCCCC
Confidence 467788999 88877766432 2 588888876 543322 2211 1 4599999998777665432
Q ss_pred -CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 208 -GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 208 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..|+.+++.+.... ..+++.-...... ..+..+.++.++++..+ .+.++.+.+++..
T Consensus 198 ~~~v~~h~lgt~~~~-----------d~lv~~e~~~~~~-~~~~~s~d~~~l~i~~~-----~~~~~~~~l~~~~ 255 (686)
T PRK10115 198 PYQVWRHTIGTPASQ-----------DELVYEEKDDTFY-VSLHKTTSKHYVVIHLA-----SATTSEVLLLDAE 255 (686)
T ss_pred CCEEEEEECCCChhH-----------CeEEEeeCCCCEE-EEEEEcCCCCEEEEEEE-----CCccccEEEEECc
Confidence 35667777662111 1233332211111 23334446777765443 3355788888854
No 438
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=93.51 E-value=5.5 Score=36.03 Aligned_cols=89 Identities=22% Similarity=0.310 Sum_probs=49.9
Q ss_pred CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc-ccccc--cCCCCCcC---CCCceeeeecCCCcceeeEEEccC---C
Q 021657 185 SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK-VGKKV--EQGPRTTN---YPAGLFFQHAGHRDKVVDFHWNAS---D 255 (309)
Q Consensus 185 ~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~-~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~---~ 255 (309)
.-.|..|.++|+|..+ |..|.. .|.|-.+.. .++.- ........ .+....+-...+...|..+.|+|. +
T Consensus 84 ~f~v~~i~~n~~g~~l-al~G~~-~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~ 161 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLL-ALVGPR-GVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESD 161 (717)
T ss_pred ceeEEEEEECCCCCEE-EEEcCC-cEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCC
Confidence 3468899999999964 455544 455555543 22211 10000000 000001111234568999999997 4
Q ss_pred CeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 256 PWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 256 ~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
..|++-.|+ +++++||+.+.
T Consensus 162 ~~l~vLtsd--------n~lR~y~~~~~ 181 (717)
T PF10168_consen 162 SHLVVLTSD--------NTLRLYDISDP 181 (717)
T ss_pred CeEEEEecC--------CEEEEEecCCC
Confidence 666654444 79999999853
No 439
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=93.28 E-value=5.2 Score=34.88 Aligned_cols=51 Identities=18% Similarity=0.238 Sum_probs=31.2
Q ss_pred eEEEEEcCCCCcceEEEeeccCCce---------eEEEeccCCCC---eEEEEcCCCcEEEEecCC
Q 021657 115 CLILWDARVGTSPVIKVEKAHDADL---------HCVDWNPLDDN---LILTGSADNSVRMFDRRN 168 (309)
Q Consensus 115 ~i~iwd~~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~---~l~~~~~dg~i~i~d~~~ 168 (309)
.|.-.|+++++ ..-.++.....+ .-+.+.. +++ .++.+..+|.++++|.++
T Consensus 272 s~vAld~~TG~--~~W~~Q~~~~D~wD~d~~~~p~l~d~~~-~G~~~~~v~~~~K~G~~~vlDr~t 334 (527)
T TIGR03075 272 SIVARDPDTGK--IKWHYQTTPHDEWDYDGVNEMILFDLKK-DGKPRKLLAHADRNGFFYVLDRTN 334 (527)
T ss_pred eEEEEccccCC--EEEeeeCCCCCCccccCCCCcEEEEecc-CCcEEEEEEEeCCCceEEEEECCC
Confidence 56666888887 333333211111 1222223 554 788999999999999998
No 440
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=93.11 E-value=1.3 Score=32.01 Aligned_cols=32 Identities=19% Similarity=0.472 Sum_probs=27.1
Q ss_pred CCeeEEEEecC-----CCcEEEEecCCCcEEEEeCCc
Q 021657 186 AAVLCVQWSPD-----KSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 186 ~~v~~~~~~~~-----~~~l~~~~~~dg~i~iwd~~~ 217 (309)
..+.+++|||. ++.+||+.+.++.|.||.-..
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 37889999984 467899999999999998765
No 441
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=93.02 E-value=5.7 Score=34.64 Aligned_cols=53 Identities=11% Similarity=0.052 Sum_probs=31.9
Q ss_pred cccCCCCCcCcccccccccCCeEE---------EEEecCCC--cEEEEEcCCCeEEEEEcCCCC
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVED---------VTFCPSSA--QEFCSVGDDSCLILWDARVGT 125 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~---------~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~ 125 (309)
+...|..+++..-.++.....+++ +....+|+ ..++.+..+|.+.+.|..+++
T Consensus 273 ~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~ 336 (527)
T TIGR03075 273 IVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGK 336 (527)
T ss_pred EEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCc
Confidence 344456666665544432222221 22223553 478899999999999998887
No 442
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=92.87 E-value=5 Score=33.59 Aligned_cols=116 Identities=13% Similarity=0.181 Sum_probs=67.0
Q ss_pred cCCCcEEEEEcCCCeEEEEEcCCCCcce--EEEeeccCCceeEEEeccC----CCCeEEEEcCCCcEEEEecCCCCCC-C
Q 021657 101 PSSAQEFCSVGDDSCLILWDARVGTSPV--IKVEKAHDADLHCVDWNPL----DDNLILTGSADNSVRMFDRRNLTSN-G 173 (309)
Q Consensus 101 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~-~ 173 (309)
+++...++.|+..|.++||+........ ......-..+|..+..-+. +...||+ -.-..+.+|.+...... .
T Consensus 34 ~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~ 112 (418)
T PF14727_consen 34 PSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVE 112 (418)
T ss_pred CCCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcc
Confidence 4455789999999999999986544221 2222334578888876431 2234444 45678888888442210 0
Q ss_pred CC--CceeeeccCC--CCeeEEEEec----CCCcEEEEecCCCcEEEEeCCc
Q 021657 174 VG--SPINKFEGHS--AAVLCVQWSP----DKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 174 ~~--~~~~~~~~~~--~~v~~~~~~~----~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+ -.+..+..|. .....+++-| .++.+++.=+.||.+.+|+-+.
T Consensus 113 ~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~ 164 (418)
T PF14727_consen 113 HGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES 164 (418)
T ss_pred cCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc
Confidence 01 1122222232 2233444433 3245677889999999999876
No 443
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=92.80 E-value=0.82 Score=28.44 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=27.6
Q ss_pred CCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 186 AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 186 ~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
...+.|.++|++++|+++....+.|++|..+.
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 45678999999999998888999999998764
No 444
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.70 E-value=2.7 Score=35.59 Aligned_cols=87 Identities=23% Similarity=0.277 Sum_probs=49.3
Q ss_pred CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc------CCCCceeeeecCCCcceeeEEEccCC---Ce
Q 021657 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT------NYPAGLFFQHAGHRDKVVDFHWNASD---PW 257 (309)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~---~~ 257 (309)
.|..+..++.|.. ++-.+.+|.+.++=-+.+++.-....... ......++... ..-.+..++|+|+. +.
T Consensus 105 eV~~vl~s~~GS~-VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss-~~ltl~Qa~WHP~S~~D~h 182 (741)
T KOG4460|consen 105 EVYQVLLSPTGSH-VALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSS-TSLTLKQAAWHPSSILDPH 182 (741)
T ss_pred EEEEEEecCCCce-EEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccC-CceeeeeccccCCccCCce
Confidence 4677888999996 45666688776665444443322111100 00111122222 23357889999975 44
Q ss_pred EEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 258 TVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 258 ~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
+++-.+ |+.+++|++...
T Consensus 183 L~iL~s--------dnviRiy~lS~~ 200 (741)
T KOG4460|consen 183 LVLLTS--------DNVIRIYSLSEP 200 (741)
T ss_pred EEEEec--------CcEEEEEecCCc
Confidence 443333 379999999853
No 445
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.55 E-value=0.87 Score=42.63 Aligned_cols=74 Identities=15% Similarity=0.211 Sum_probs=50.8
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcC----CCC----c--------------ceEEEee-ccCCceeEEEeccC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR----VGT----S--------------PVIKVEK-AHDADLHCVDWNPL 147 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~----~~~----~--------------~~~~~~~-~~~~~v~~~~~~~~ 147 (309)
.-.|+++....+| ++|++| .|| .+|.+. .+- . +....+. .+.++|..+.+..
T Consensus 178 g~~V~~I~~t~nG-RIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~- 252 (1311)
T KOG1900|consen 178 GVSVNCITYTENG-RIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN- 252 (1311)
T ss_pred CceEEEEEeccCC-cEEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc-
Confidence 5578899877777 766655 566 455442 110 0 1111222 5677999999998
Q ss_pred CCCeEEEEcCCCcEEEEecCCC
Q 021657 148 DDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 148 ~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
..+.+.+-+..|+|.+||+...
T Consensus 253 SR~IlY~lsek~~v~~Y~i~~~ 274 (1311)
T KOG1900|consen 253 SRNILYVLSEKGTVSAYDIGGN 274 (1311)
T ss_pred ccceeeeeccCceEEEEEccCC
Confidence 8889999999999999999863
No 446
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=92.41 E-value=3.1 Score=34.61 Aligned_cols=162 Identities=15% Similarity=0.177 Sum_probs=90.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|..+-..|||+.|..-+. .++.|+++.+....... +.+...++..
T Consensus 222 ~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rk---------------------------l~~dspg~~~------ 267 (733)
T COG4590 222 DVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRK---------------------------LVDDSPGDSR------ 267 (733)
T ss_pred chHhhEECCCCCEEEEecC-CeEEEEeecccccchhh---------------------------hhhcCCCchH------
Confidence 5778889999998776555 68888988753111110 0000001000
Q ss_pred cCCeE-EEEEecCCCcEEEEEcCCCeEEEE-EcCCCCcceEE---EeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 91 EDTVE-DVTFCPSSAQEFCSVGDDSCLILW-DARVGTSPVIK---VEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 91 ~~~v~-~~~~~~~~~~~l~s~~~dg~i~iw-d~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
..|+ .+..-. |+.-+..++.||-|.-| |++.+..+... .++-...++..+.-.. +.+-+++-+..|++..+.
T Consensus 268 -~~Vte~l~lL~-Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~-~rkgF~~l~~~G~L~~f~ 344 (733)
T COG4590 268 -HQVTEQLYLLS-GGFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPET-NRKGFYSLYRNGTLQSFY 344 (733)
T ss_pred -HHHHHHHHHHh-CceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeecccc-ccceEEEEcCCCceeeee
Confidence 0111 111112 33557788889988877 55544322222 2222223444333222 456788888889988876
Q ss_pred cCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
... .+.+- ++.--..+.-++++|.+.+++ + -+.|.++++.+++.
T Consensus 345 st~------~~~lL-~~~~~~~~~~~~~Sp~~~~Ll-~-e~~gki~~~~l~Nr 388 (733)
T COG4590 345 STS------EKLLL-FERAYQAPQLVAMSPNQAYLL-S-EDQGKIRLAQLENR 388 (733)
T ss_pred ccc------Cccee-hhhhhcCcceeeeCcccchhe-e-ecCCceEEEEecCC
Confidence 554 23322 222233567789999999854 3 44688999999873
No 447
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=92.04 E-value=8.7 Score=34.42 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=26.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQD 40 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~ 40 (309)
.++++.-+|.++-++.+..||+|++|+...
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~si~lfn~~~ 45 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGSIILFNFIP 45 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCcEEEEeecc
Confidence 467888899999999999999999999863
No 448
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=91.97 E-value=0.11 Score=46.14 Aligned_cols=155 Identities=10% Similarity=0.112 Sum_probs=84.8
Q ss_pred CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec-----cCCCC
Q 021657 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE-----GHSAA 187 (309)
Q Consensus 113 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~ 187 (309)
.+.+++-+...... -....++..+.+-.++|...+...+. -.-|.+.+||+...+ ++....+. .-...
T Consensus 110 ~~~vrvaN~~~sm~-~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~----G~iq~~l~v~~~~p~gs~ 182 (1283)
T KOG1916|consen 110 ENGVRVANQEPSMR-HNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQ----GEIQPQLEVTPITPYGSD 182 (1283)
T ss_pred hhhhhhccCcchhH-HHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhc----cccccceEEeecCcCCCC
Confidence 35566665543321 01234556677777887543333333 345788999988644 44333332 22344
Q ss_pred eeEEEEec---CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE-----------Ecc
Q 021657 188 VLCVQWSP---DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH-----------WNA 253 (309)
Q Consensus 188 v~~~~~~~---~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----------~~~ 253 (309)
+.-+.|.| +..+ +..+-.++.+++........ ..+.+|..++++++ .+|
T Consensus 183 ~~~V~wcp~~~~~~~-ic~~~~~~~i~lL~~~ra~~----------------~l~rsHs~~~~d~a~~~~g~~~l~~lSp 245 (1283)
T KOG1916|consen 183 PQLVSWCPIAVNKVY-ICYGLKGGEIRLLNINRALR----------------SLFRSHSQRVTDMAFFAEGVLKLASLSP 245 (1283)
T ss_pred cceeeecccccccce-eeeccCCCceeEeeechHHH----------------HHHHhcCCCcccHHHHhhchhhheeeCC
Confidence 56667765 4443 44666778888777655211 12334666665554 456
Q ss_pred CCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccc
Q 021657 254 SDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKA 300 (309)
Q Consensus 254 ~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~ 300 (309)
||..++ +...||.+++|.+.-. ......|+.+.+.|.+
T Consensus 246 DGtv~a--------~a~~dG~v~f~Qiyi~-g~~~~rclhewkphd~ 283 (1283)
T KOG1916|consen 246 DGTVFA--------WAISDGSVGFYQIYIT-GKIVHRCLHEWKPHDK 283 (1283)
T ss_pred CCcEEE--------EeecCCccceeeeeee-ccccHhhhhccCCCCC
Confidence 665444 3334477777776521 1124578888888873
No 449
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=91.90 E-value=0.99 Score=23.25 Aligned_cols=23 Identities=13% Similarity=0.372 Sum_probs=19.4
Q ss_pred cCCCcEEEEecCCCcEEEEeCCc
Q 021657 195 PDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 195 ~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
|++++++++...++.|.++|..+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~ 23 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTAT 23 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCC
Confidence 57888888887889999999866
No 450
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=91.71 E-value=5.4 Score=32.39 Aligned_cols=26 Identities=8% Similarity=0.162 Sum_probs=21.4
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeC
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSI 38 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~ 38 (309)
-++|+|.|||++|++ ...|.|++++.
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~~ 29 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVDK 29 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEET
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEeC
Confidence 379999999977665 55999999993
No 451
>PRK13684 Ycf48-like protein; Provisional
Probab=91.64 E-value=6.4 Score=32.03 Aligned_cols=112 Identities=10% Similarity=0.102 Sum_probs=61.4
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-ceEEEe-eccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-PVIKVE-KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
...++++.+.+++ ..++. +..|.+++=....+.. ...... ......+..+.+.| ++..+++| .+|.+.. ....
T Consensus 214 ~~~l~~i~~~~~g-~~~~v-g~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~-~~~~~~~G-~~G~v~~-S~d~ 288 (334)
T PRK13684 214 SRRLQSMGFQPDG-NLWML-ARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRT-PGEIWAGG-GNGTLLV-SKDG 288 (334)
T ss_pred cccceeeeEcCCC-CEEEE-ecCCEEEEccCCCCCccccccCCccccccceeeEEEcC-CCCEEEEc-CCCeEEE-eCCC
Confidence 3578899999987 55554 4567765432333331 111100 01123578889988 66655554 5675543 3333
Q ss_pred CCCCCCCCceeee---ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 169 LTSNGVGSPINKF---EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 169 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
++.-... .......+.+.|..+++ .++ .+..|.|.-|+-
T Consensus 289 ------G~tW~~~~~~~~~~~~~~~~~~~~~~~-~~~-~G~~G~il~~~~ 330 (334)
T PRK13684 289 ------GKTWEKDPVGEEVPSNFYKIVFLDPEK-GFV-LGQRGVLLRYVG 330 (334)
T ss_pred ------CCCCeECCcCCCCCcceEEEEEeCCCc-eEE-ECCCceEEEecC
Confidence 2222222 22234577888877776 454 455888877763
No 452
>PLN02153 epithiospecifier protein
Probab=91.10 E-value=7.3 Score=31.74 Aligned_cols=22 Identities=9% Similarity=0.095 Sum_probs=14.5
Q ss_pred cEEEEEcCC-----------CeEEEEEcCCCCc
Q 021657 105 QEFCSVGDD-----------SCLILWDARVGTS 126 (309)
Q Consensus 105 ~~l~s~~~d-----------g~i~iwd~~~~~~ 126 (309)
++++.|+.+ ..+.+||..+.+.
T Consensus 139 ~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W 171 (341)
T PLN02153 139 HVYVFGGVSKGGLMKTPERFRTIEAYNIADGKW 171 (341)
T ss_pred EEEEECCccCCCccCCCcccceEEEEECCCCeE
Confidence 566666643 2477889877664
No 453
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=91.00 E-value=8.5 Score=32.29 Aligned_cols=152 Identities=11% Similarity=0.109 Sum_probs=85.4
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEe
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFC 100 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 100 (309)
...+++||.+|.+|||+......... .+..-..-..+|..+..-
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~------------------------------------~lllE~~l~~PILqv~~G 80 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPE------------------------------------DLLLETQLKDPILQVECG 80 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCc------------------------------------cEEEEEecCCcEEEEEec
Confidence 45899999999999999853211100 000111123566666553
Q ss_pred c---C-CCcEEEEEcCCCeEEEEEcCCCC-------cceEEEeeccCC--ceeEEEeccCC----CCeEEEEcCCCcEEE
Q 021657 101 P---S-SAQEFCSVGDDSCLILWDARVGT-------SPVIKVEKAHDA--DLHCVDWNPLD----DNLILTGSADNSVRM 163 (309)
Q Consensus 101 ~---~-~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~--~v~~~~~~~~~----~~~l~~~~~dg~i~i 163 (309)
. . ....||. -.-..+.+|.+.... .........|.- ....+++-|.. ..++.+-+.||.+.+
T Consensus 81 ~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~ 159 (418)
T PF14727_consen 81 KFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSF 159 (418)
T ss_pred cccCCCCcceEEE-ecCCEEEEEEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEE
Confidence 2 1 2123333 456677788773221 112233333432 33444443322 368888999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
|+-+. ....+.+.. ---.-.+.+.+.-.. |++++.+..+.-|....
T Consensus 160 feqe~------~~f~~~lp~-~llPgPl~Y~~~tDs-fvt~sss~~l~~Yky~~ 205 (418)
T PF14727_consen 160 FEQES------FAFSRFLPD-FLLPGPLCYCPRTDS-FVTASSSWTLECYKYQD 205 (418)
T ss_pred EeCCc------EEEEEEcCC-CCCCcCeEEeecCCE-EEEecCceeEEEecHHH
Confidence 99776 332333332 222335678887775 45888788898888644
No 454
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=90.84 E-value=6.7 Score=30.87 Aligned_cols=99 Identities=17% Similarity=0.224 Sum_probs=55.7
Q ss_pred ccCCeEEEEEecCCCcEEEEEc------CCCeEEEEEcCCCCcceEEE-e-eccCCceeEEEeccCCCC-eEEEEc-CC-
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVG------DDSCLILWDARVGTSPVIKV-E-KAHDADLHCVDWNPLDDN-LILTGS-AD- 158 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~-~l~~~~-~d- 158 (309)
-.+.|+++.|..+. .+++.|. ....+..||+.+........ . ..-.++|..+.+...+.. +.+.|. .+
T Consensus 35 i~G~V~~l~~~~~~-~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g 113 (281)
T PF12768_consen 35 ISGTVTDLQWASNN-QLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANG 113 (281)
T ss_pred ceEEEEEEEEecCC-EEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEEeeccCCceEEEeceecCC
Confidence 45789999998655 6777665 45678899988776321111 0 122467888887543444 444443 23
Q ss_pred -CcEEEEecCCCCCCCCCCceee-eccCCCCeeEEEEec
Q 021657 159 -NSVRMFDRRNLTSNGVGSPINK-FEGHSAAVLCVQWSP 195 (309)
Q Consensus 159 -g~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~ 195 (309)
..|..||-.+ ...+.. .......|..+.+-|
T Consensus 114 ~~~l~~~dGs~------W~~i~~~~~~~~t~I~~l~~~~ 146 (281)
T PF12768_consen 114 STFLMKYDGSS------WSSIGSDILGSGTTIRGLQVLP 146 (281)
T ss_pred CceEEEEcCCc------eEeccccccCCCCEEEEEEEEe
Confidence 3466676554 433333 222234566655543
No 455
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.61 E-value=5.6 Score=37.76 Aligned_cols=172 Identities=14% Similarity=0.231 Sum_probs=86.2
Q ss_pred EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEe-ccC------CCCeEEEEcCCCcEEEEecC
Q 021657 95 EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDW-NPL------DDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~------~~~~l~~~~~dg~i~i~d~~ 167 (309)
..+-+-|.=++.-+| -|+.+.+|+.+++. ....+.+-...|..+.. -|. .=++++.-+.--.|.++-+.
T Consensus 82 ~~mGiFpeI~RaWiT--iDn~L~lWny~~~~--e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~ 157 (1311)
T KOG1900|consen 82 TDMGIFPEIGRAWIT--IDNNLFLWNYESDN--ELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVS 157 (1311)
T ss_pred eeeccchhhcceEEE--eCCeEEEEEcCCCC--ccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEE
Confidence 344444442133333 57889999998855 34444555555555543 220 11233333334456555433
Q ss_pred CCCCCCCC---CceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC---------CCCce
Q 021657 168 NLTSNGVG---SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN---------YPAGL 235 (309)
Q Consensus 168 ~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~ 235 (309)
-....... ....++......|+++....+|+ +| -++.|| .+|.+.-....-....+... .....
T Consensus 158 ~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGR-IF-~~G~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs 233 (1311)
T KOG1900|consen 158 FDEFTGELSIFNTSFKISVDGVSVNCITYTENGR-IF-FAGRDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPS 233 (1311)
T ss_pred eccccCcccccccceeeecCCceEEEEEeccCCc-EE-EeecCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhh
Confidence 21100000 01122223355688998888888 56 455577 45554321111111110000 00001
Q ss_pred eeeec-CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 236 FFQHA-GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 236 ~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+..+. .+..+|..++...... ++.+-++. |+|.+|++..
T Consensus 234 ~~~~~~~~~dpI~qi~ID~SR~-IlY~lsek-------~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 234 LLSVPGSSKDPIRQITIDNSRN-ILYVLSEK-------GTVSAYDIGG 273 (1311)
T ss_pred hhcCCCCCCCcceeeEeccccc-eeeeeccC-------ceEEEEEccC
Confidence 22333 6778999999987554 55555555 9999999985
No 456
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=90.38 E-value=9 Score=31.57 Aligned_cols=149 Identities=12% Similarity=0.138 Sum_probs=83.8
Q ss_pred CeEEEEEcCCCCcceEEEee-------ccCCceeEEEe--ccCCCC-eEEEEcCCCcEEEEecCCCCC-CCCCCceeeec
Q 021657 114 SCLILWDARVGTSPVIKVEK-------AHDADLHCVDW--NPLDDN-LILTGSADNSVRMFDRRNLTS-NGVGSPINKFE 182 (309)
Q Consensus 114 g~i~iwd~~~~~~~~~~~~~-------~~~~~v~~~~~--~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~ 182 (309)
..|++|.+..... ....+. .....++.+|+ +|.++. +.+....+|.+..|.+..... ....+.+++|.
T Consensus 127 n~l~~f~id~~~g-~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~ 205 (381)
T PF02333_consen 127 NSLRLFRIDPDTG-ELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFK 205 (381)
T ss_dssp -EEEEEEEETTTT-EEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE
T ss_pred CeEEEEEecCCCC-cceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEec
Confidence 4699998754322 122221 11234677776 342344 666778899999888863221 11135677887
Q ss_pred cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC--CCcceeeEEEc--cCC-Ce
Q 021657 183 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG--HRDKVVDFHWN--ASD-PW 257 (309)
Q Consensus 183 ~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~--~~~-~~ 257 (309)
. ...+..+.......+|+ .+-++.-|.-|+.+..... ....+....+ ....|-.|++- +++ .+
T Consensus 206 ~-~sQ~EGCVVDDe~g~LY-vgEE~~GIW~y~Aep~~~~----------~~~~v~~~~g~~l~aDvEGlaly~~~~g~gY 273 (381)
T PF02333_consen 206 V-GSQPEGCVVDDETGRLY-VGEEDVGIWRYDAEPEGGN----------DRTLVASADGDGLVADVEGLALYYGSDGKGY 273 (381)
T ss_dssp --SS-EEEEEEETTTTEEE-EEETTTEEEEEESSCCC-S------------EEEEEBSSSSB-S-EEEEEEEE-CCC-EE
T ss_pred C-CCcceEEEEecccCCEE-EecCccEEEEEecCCCCCC----------cceeeecccccccccCccceEEEecCCCCeE
Confidence 4 45788899988888765 7888887777777642211 1122322222 34567777764 333 46
Q ss_pred EEEEecCCCCCCCCCCeEEEEEccc
Q 021657 258 TVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 258 ~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|++|.-.+ ++..||+...
T Consensus 274 LivSsQG~-------~sf~Vy~r~~ 291 (381)
T PF02333_consen 274 LIVSSQGD-------NSFAVYDREG 291 (381)
T ss_dssp EEEEEGGG-------TEEEEEESST
T ss_pred EEEEcCCC-------CeEEEEecCC
Confidence 77755444 7999999874
No 457
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=90.21 E-value=7.7 Score=30.48 Aligned_cols=134 Identities=14% Similarity=0.062 Sum_probs=74.5
Q ss_pred EEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC
Q 021657 118 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 197 (309)
Q Consensus 118 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 197 (309)
+|+..............-.+-+..+.++ +++...+..+.-+++.|+.++.. ...+..+. ..+.-.++.. .|
T Consensus 68 itn~~~~t~~~l~~~i~~~~l~~Dv~vs---e~yvyvad~ssGL~IvDIS~P~s---P~~~~~ln-t~gyaygv~v--sG 138 (370)
T COG5276 68 ITNVSLQTHDVLLSVINARDLFADVRVS---EEYVYVADWSSGLRIVDISTPDS---PTLIGFLN-TDGYAYGVYV--SG 138 (370)
T ss_pred ccCcccccCcceEEEEehhhhhheeEec---ccEEEEEcCCCceEEEeccCCCC---cceecccc-CCceEEEEEe--cC
Confidence 4554433332333333445566777775 46777777888899999998642 22222222 2233444444 56
Q ss_pred CcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEE
Q 021657 198 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQI 277 (309)
Q Consensus 198 ~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~v 277 (309)
++..++.- |.-+.+.|+..+.++ ++.............++.+ |++-.+ +..|+-+++
T Consensus 139 n~aYVadl-ddgfLivdvsdpssP------------~lagrya~~~~d~~~v~IS--Gn~AYv--------A~~d~GL~i 195 (370)
T COG5276 139 NYAYVADL-DDGFLIVDVSDPSSP------------QLAGRYALPGGDTHDVAIS--GNYAYV--------AWRDGGLTI 195 (370)
T ss_pred CEEEEeec-cCcEEEEECCCCCCc------------eeeeeeccCCCCceeEEEe--cCeEEE--------EEeCCCeEE
Confidence 76654443 445678999884433 2333333333334556666 444342 234478889
Q ss_pred EEcccc
Q 021657 278 WRMSDL 283 (309)
Q Consensus 278 w~~~~~ 283 (309)
-|+.++
T Consensus 196 vDVSnp 201 (370)
T COG5276 196 VDVSNP 201 (370)
T ss_pred EEccCC
Confidence 999864
No 458
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=90.04 E-value=1.6 Score=22.42 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=21.4
Q ss_pred cCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee
Q 021657 101 PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK 133 (309)
Q Consensus 101 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 133 (309)
|+++.++++.-.++.|.++|..+.+ ......
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~--~~~~i~ 31 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNK--VIATIP 31 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCe--EEEEEE
Confidence 4565566667678999999997766 444443
No 459
>PLN02193 nitrile-specifier protein
Probab=90.01 E-value=12 Score=32.26 Aligned_cols=62 Identities=6% Similarity=-0.040 Sum_probs=32.9
Q ss_pred cEEEEEcCCC-----eEEEEEcCCCCcceEEEe---eccCCceeEEEeccCCCCeEEEEcCC----CcEEEEecCCC
Q 021657 105 QEFCSVGDDS-----CLILWDARVGTSPVIKVE---KAHDADLHCVDWNPLDDNLILTGSAD----NSVRMFDRRNL 169 (309)
Q Consensus 105 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~ 169 (309)
++++.|+.++ .+..||+.+.+....... ....... .++.. ++++++.++.+ ..+.+||+.+.
T Consensus 280 ~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~-~~~~~--~gkiyviGG~~g~~~~dv~~yD~~t~ 353 (470)
T PLN02193 280 NVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGA-GLEVV--QGKVWVVYGFNGCEVDDVHYYDPVQD 353 (470)
T ss_pred EEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCc-EEEEE--CCcEEEEECCCCCccCceEEEECCCC
Confidence 6677776543 467788776653221110 0111111 22222 56777777655 45889998873
No 460
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=89.71 E-value=10 Score=31.22 Aligned_cols=114 Identities=18% Similarity=0.140 Sum_probs=53.7
Q ss_pred EEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-CCCeEEEEc-------------------
Q 021657 97 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDNLILTGS------------------- 156 (309)
Q Consensus 97 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~------------------- 156 (309)
..++|++..++.. .....|+-.|+++.+. ..........+-...|..+ ++..++-.-
T Consensus 86 ~~~s~~~~~~~Yv-~~~~~l~~vdL~T~e~--~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~ 162 (386)
T PF14583_consen 86 GFLSPDDRALYYV-KNGRSLRRVDLDTLEE--RVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFY 162 (386)
T ss_dssp -EE-TTSSEEEEE-ETTTEEEEEETTT--E--EEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHH
T ss_pred eEEecCCCeEEEE-ECCCeEEEEECCcCcE--EEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHH
Confidence 4556776343333 3445778888888773 3333334444444555421 333332211
Q ss_pred ---CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC---CC-cEEEEeCCcccc
Q 021657 157 ---ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE---DG-LLNIWDYEKVGK 220 (309)
Q Consensus 157 ---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---dg-~i~iwd~~~~~~ 220 (309)
....|.-.|+++ ++....+. ....+..+.|+|....+++-|-+ +. .-+||-++..+.
T Consensus 163 ~a~p~~~i~~idl~t------G~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~ 226 (386)
T PF14583_consen 163 EARPHCRIFTIDLKT------GERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGS 226 (386)
T ss_dssp HC---EEEEEEETTT--------EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS-
T ss_pred hhCCCceEEEEECCC------CceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCC
Confidence 112244455555 44433333 45678899999988887755432 22 136777766443
No 461
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=88.85 E-value=2.8 Score=36.72 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=40.4
Q ss_pred cEEEEEcCCCeEEEEEcCC---CCcceEEEee-c--------------------cCCceeEEEecc---CCCCeEEEEcC
Q 021657 105 QEFCSVGDDSCLILWDARV---GTSPVIKVEK-A--------------------HDADLHCVDWNP---LDDNLILTGSA 157 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~-~--------------------~~~~v~~~~~~~---~~~~~l~~~~~ 157 (309)
..|+.+..||.+....... .......... . .......++++. .+..++++.+.
T Consensus 159 ~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl~~ 238 (547)
T PF11715_consen 159 ANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTLSR 238 (547)
T ss_dssp SBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEEET
T ss_pred CEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEEeC
Confidence 5678888899888887764 1110111100 0 112334444433 15678999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKF 181 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~ 181 (309)
|+++|+||+.+ ++++.+.
T Consensus 239 D~~LRiW~l~t------~~~~~~~ 256 (547)
T PF11715_consen 239 DHTLRIWSLET------GQCLATI 256 (547)
T ss_dssp TSEEEEEETTT------TCEEEEE
T ss_pred CCeEEEEECCC------CeEEEEe
Confidence 99999999999 6665443
No 462
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=88.82 E-value=10 Score=29.93 Aligned_cols=52 Identities=17% Similarity=0.328 Sum_probs=34.4
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec------CCCcEEEEeCCc
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA------EDGLLNIWDYEK 217 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~dg~i~iwd~~~ 217 (309)
..|++||..+.+ =..--.+-.+.|++|.|..+.+ |+++|. ....+..||+.+
T Consensus 16 ~~lC~yd~~~~q------W~~~g~~i~G~V~~l~~~~~~~-Llv~G~ft~~~~~~~~la~yd~~~ 73 (281)
T PF12768_consen 16 PGLCLYDTDNSQ------WSSPGNGISGTVTDLQWASNNQ-LLVGGNFTLNGTNSSNLATYDFKN 73 (281)
T ss_pred CEEEEEECCCCE------eecCCCCceEEEEEEEEecCCE-EEEEEeeEECCCCceeEEEEecCC
Confidence 358999988632 1111223457899999986555 676664 456688899887
No 463
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=87.50 E-value=14 Score=29.98 Aligned_cols=169 Identities=20% Similarity=0.300 Sum_probs=93.1
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCe------EEEEEcCCC--CcceE-----EEeeccCC--------ceeEEEeccCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSC------LILWDARVG--TSPVI-----KVEKAHDA--------DLHCVDWNPLDD 149 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~------i~iwd~~~~--~~~~~-----~~~~~~~~--------~v~~~~~~~~~~ 149 (309)
-+.+..+.+.+++ ..+++-+++|. +...++... ..... ..+....+ ..-+|++.+ ++
T Consensus 19 ~GGlSgl~~~~~~-~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~-~g 96 (326)
T PF13449_consen 19 FGGLSGLDYDPDD-GRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPP-DG 96 (326)
T ss_pred cCcEeeEEEeCCC-CEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEec-CC
Confidence 3567889998765 45666677777 665555431 10001 11111111 344788855 78
Q ss_pred CeEEEEcCC------CcEEEEecCCCCCCCCCCceeee---------------ccCCCCeeEEEEecCCCcEEEEec---
Q 021657 150 NLILTGSAD------NSVRMFDRRNLTSNGVGSPINKF---------------EGHSAAVLCVQWSPDKSSVFGSSA--- 205 (309)
Q Consensus 150 ~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~--- 205 (309)
.++++.-.+ -.|+.++.. ++.+..+ ...+....+|+++|+|+.|+++.-
T Consensus 97 ~~~is~E~~~~~~~~p~I~~~~~~-------G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l 169 (326)
T PF13449_consen 97 SFWISSEGGRTGGIPPRIRRFDLD-------GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPL 169 (326)
T ss_pred CEEEEeCCccCCCCCCEEEEECCC-------CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccc
Confidence 888777667 678888765 2222222 123456889999999996553321
Q ss_pred -CCC---------cEEEEeCCcc--cccccCCCCCcCCCCceeeeecC-----CCcceeeEEEccCCCeEEEEecCCCCC
Q 021657 206 -EDG---------LLNIWDYEKV--GKKVEQGPRTTNYPAGLFFQHAG-----HRDKVVDFHWNASDPWTVVSVSDDCDS 268 (309)
Q Consensus 206 -~dg---------~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~s~s~d~~s 268 (309)
.|+ .++++.+... +... .+..+.+.. ....+..+.+.+++..+++--+. .
T Consensus 170 ~~d~~~~~~~~~~~~ri~~~d~~~~~~~~----------~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~---~ 236 (326)
T PF13449_consen 170 KQDGPRANPDNGSPLRILRYDPKTPGEPV----------AEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDF---S 236 (326)
T ss_pred cCCCcccccccCceEEEEEecCCCCCccc----------eEEEEeCCccccccCCCCceeEEEECCCcEEEEEccC---C
Confidence 122 1455544431 2111 112233322 45678999999988877765553 2
Q ss_pred CCCCCeEEEEEcc
Q 021657 269 TGGGGTLQIWRMS 281 (309)
Q Consensus 269 ~~~dg~v~vw~~~ 281 (309)
.+....++|+.+.
T Consensus 237 ~~~~~~~ri~~v~ 249 (326)
T PF13449_consen 237 PGTGNYKRIYRVD 249 (326)
T ss_pred CCccceEEEEEEE
Confidence 2244556666554
No 464
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=87.43 E-value=13 Score=29.52 Aligned_cols=122 Identities=10% Similarity=0.106 Sum_probs=73.8
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC-----CcceEEEeec-----cCCceeEEEeccCCC------------C
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-----TSPVIKVEKA-----HDADLHCVDWNPLDD------------N 150 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~-----~~~~v~~~~~~~~~~------------~ 150 (309)
.-+.|+++|.+ .+-++....+...+||.... ..+....+.. .....+.+.|+. .. .
T Consensus 24 N~WGia~~p~~-~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~-~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 24 NAWGLSYRPGG-PFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNG-SDTFVVSGEGITGPS 101 (336)
T ss_pred ccceeEecCCC-CEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeC-CCceEEcCCCcccce
Confidence 45789999988 66677777789999998611 2223333321 234577777764 22 2
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeec-cCCCCe-eEEEEe--cCCCcEEEEecCCCcEEEEeCCc
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFE-GHSAAV-LCVQWS--PDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v-~~~~~~--~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.++.+++||+|.-|........- ......+. .....| ..+++. ..+.+|+++--.+++|.+||-.-
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~-~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f 171 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRM-TRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSF 171 (336)
T ss_pred eEEEEeCCceEEeecCcCCcccc-cccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcc
Confidence 36778899999999854311000 01112222 112333 345554 34677888888899999998765
No 465
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=87.17 E-value=4.1 Score=36.62 Aligned_cols=136 Identities=11% Similarity=0.167 Sum_probs=79.8
Q ss_pred EEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc
Q 021657 106 EFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG 183 (309)
Q Consensus 106 ~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 183 (309)
.+..|+.++.+.++.-..+..+ ...........+.++.+++ .-+..|.-||++-.|-- .+.....+.+-..+..
T Consensus 549 Tic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss---~Slgagl~dgt~a~y~r-ap~gSwd~ep~~~~~~ 624 (925)
T KOG3522|consen 549 TICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSS---GSLGAGLIDGTLAVYGR-APSGSWDGEPNISIPT 624 (925)
T ss_pred cccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhccc---cccccCccCCccccccC-CCCCCCCCCCcccccc
Confidence 4677889999999986533311 1122233345667777655 34555666776655422 2111111333344444
Q ss_pred CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEE
Q 021657 184 HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVS 261 (309)
Q Consensus 184 ~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 261 (309)
...++.+.++..| . +.++.+|.|.++...+..... .......|...|+.+....++-++..+
T Consensus 625 g~lPvrsla~~ed---~-~was~gG~V~vi~~tt~~~~~------------~leahqee~~~Vthm~~~~~gVwvafa 686 (925)
T KOG3522|consen 625 GSLPVRSLAFQED---F-VWASEGGCVHVIPSTTFIRSW------------DLEAHQEEAHSVTHMLYLDNGVWVAFA 686 (925)
T ss_pred CCccccchhhhhc---e-eeeecCCceEEEechhccccc------------hhHHHHhhcceEEEEEeeCCceEEEEc
Confidence 5678888888776 3 367779999999988733221 122334456678988888766554443
No 466
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=86.95 E-value=7.7 Score=26.46 Aligned_cols=112 Identities=12% Similarity=0.071 Sum_probs=67.4
Q ss_pred EEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-----eEEEeeccCCceeEEEeccC----CCCeEEEEcCCCcEEEEec
Q 021657 96 DVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-----VIKVEKAHDADLHCVDWNPL----DDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 96 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~dg~i~i~d~ 166 (309)
.-+|.... ..|++++.-|.|.|++....... ....+..-...|++++--+. ....|+.|+. ..+..||+
T Consensus 3 iGkfDG~~-pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~-t~llaYDV 80 (136)
T PF14781_consen 3 IGKFDGVH-PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDV 80 (136)
T ss_pred EEEeCCCc-eeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEc
Confidence 34566666 45788888899999987644310 11122344567888865442 3457777764 57889999
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecC---CCcEEEEecCCCcEEEEeCCc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPD---KSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.. ...+.. +.-...++++.+-.- ...++..| .+..|.=||...
T Consensus 81 ~~------N~d~Fy-ke~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G 126 (136)
T PF14781_consen 81 EN------NSDLFY-KEVPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEG 126 (136)
T ss_pred cc------Cchhhh-hhCccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCC
Confidence 87 333332 233467888877431 22244344 477787777664
No 467
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=86.82 E-value=19 Score=30.74 Aligned_cols=55 Identities=13% Similarity=0.171 Sum_probs=36.4
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE----ee-ccCCceeEEEecc
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV----EK-AHDADLHCVDWNP 146 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~-~~~~~v~~~~~~~ 146 (309)
-...+.|+|.|++ .+|++--..|.|++++........... .. ........|+++|
T Consensus 29 L~~Pw~maflPDG-~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~P 88 (454)
T TIGR03606 29 LNKPWALLWGPDN-QLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHP 88 (454)
T ss_pred CCCceEEEEcCCC-eEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECC
Confidence 3456899999998 777665446999999865443211111 11 1356789999998
No 468
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=86.32 E-value=13 Score=28.54 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=48.8
Q ss_pred EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-C--CcEEEEecCCCCCCCCCCce-eeeccCCCCeeEE
Q 021657 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-D--NSVRMFDRRNLTSNGVGSPI-NKFEGHSAAVLCV 191 (309)
Q Consensus 116 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d--g~i~i~d~~~~~~~~~~~~~-~~~~~~~~~v~~~ 191 (309)
-.+||+.+.+. .........-..+-.+.+ +|+++.+|+. + ..+++++............. ..+. ....=-++
T Consensus 48 s~~yD~~tn~~--rpl~v~td~FCSgg~~L~-dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWYpT~ 123 (243)
T PF07250_consen 48 SVEYDPNTNTF--RPLTVQTDTFCSGGAFLP-DGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWYPTA 123 (243)
T ss_pred EEEEecCCCcE--EeccCCCCCcccCcCCCC-CCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCccccc
Confidence 35788888772 222222333444556778 8999999876 2 35888876541100001100 1122 22333445
Q ss_pred EEecCCCcEEEEecCC-CcEEEEeC
Q 021657 192 QWSPDKSSVFGSSAED-GLLNIWDY 215 (309)
Q Consensus 192 ~~~~~~~~l~~~~~~d-g~i~iwd~ 215 (309)
..-|||+.++ .|+.+ ....+|.-
T Consensus 124 ~~L~DG~vlI-vGG~~~~t~E~~P~ 147 (243)
T PF07250_consen 124 TTLPDGRVLI-VGGSNNPTYEFWPP 147 (243)
T ss_pred eECCCCCEEE-EeCcCCCcccccCC
Confidence 6678999655 55544 33444443
No 469
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=85.86 E-value=2.4 Score=19.76 Aligned_cols=24 Identities=8% Similarity=0.170 Sum_probs=19.4
Q ss_pred EEEEECCCCCEEEEecCCCcEEEE
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLW 36 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vw 36 (309)
..++++++|+++++-+....|+++
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEEC
Confidence 678888889888888888887764
No 470
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.84 E-value=26 Score=31.53 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=27.0
Q ss_pred CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 184 HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 184 ~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
..+.+..+..+|+.++ +|--...|.|.+-+++.
T Consensus 215 ~~~~~~ki~VS~n~~~-laLyt~~G~i~~vs~D~ 247 (829)
T KOG2280|consen 215 PNSSVVKISVSPNRRF-LALYTETGKIWVVSIDL 247 (829)
T ss_pred CCceEEEEEEcCCcce-EEEEecCCcEEEEecch
Confidence 3466788999999997 57888899999988876
No 471
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=85.34 E-value=18 Score=29.21 Aligned_cols=63 Identities=10% Similarity=0.049 Sum_probs=35.0
Q ss_pred cEEEEEcC-----CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc----EEEEecCCC
Q 021657 105 QEFCSVGD-----DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS----VRMFDRRNL 169 (309)
Q Consensus 105 ~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~----i~i~d~~~~ 169 (309)
.+++.|+. ...+..||+.+.++.....+..... ....+..- ++.+++.|+.++. +..||.++.
T Consensus 125 ~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r-~~~~~~~~-~~~iYv~GG~~~~~~~~~~~yd~~~~ 196 (323)
T TIGR03548 125 TLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPR-VQPVCVKL-QNELYVFGGGSNIAYTDGYKYSPKKN 196 (323)
T ss_pred EEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCC-CcceEEEE-CCEEEEEcCCCCccccceEEEecCCC
Confidence 66677664 2468888988777533322221111 11122222 6778888877643 467888763
No 472
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.10 E-value=23 Score=33.75 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=25.0
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCc
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQD 40 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~ 40 (309)
..++|+|.-.++|.+..+|.|+++-...
T Consensus 39 ~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 39 SALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred cceeeccccceEEEEEecccEEEecccc
Confidence 4789999999999999999999998654
No 473
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=84.98 E-value=22 Score=29.82 Aligned_cols=70 Identities=16% Similarity=0.290 Sum_probs=41.8
Q ss_pred ccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCC-----ceeeecc--CCCCeeEEEEecCCCcEEEEecC
Q 021657 134 AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS-----PINKFEG--HSAAVLCVQWSPDKSSVFGSSAE 206 (309)
Q Consensus 134 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~ 206 (309)
.....++++.+.+ ++..++++ .+|.+.. .... ++ ....... ....+..+.+.+++. ++ .++.
T Consensus 278 ~~~~~l~~v~~~~-dg~l~l~g-~~G~l~~-S~d~------G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~-~~-a~G~ 346 (398)
T PLN00033 278 ASARRIQNMGWRA-DGGLWLLT-RGGGLYV-SKGT------GLTEEDFDFEEADIKSRGFGILDVGYRSKKE-AW-AAGG 346 (398)
T ss_pred CCccceeeeeEcC-CCCEEEEe-CCceEEE-ecCC------CCcccccceeecccCCCCcceEEEEEcCCCc-EE-EEEC
Confidence 3456788999998 77777766 5566543 3322 22 2222221 123588899998887 45 4555
Q ss_pred CCcEEEEe
Q 021657 207 DGLLNIWD 214 (309)
Q Consensus 207 dg~i~iwd 214 (309)
+|.+....
T Consensus 347 ~G~v~~s~ 354 (398)
T PLN00033 347 SGILLRST 354 (398)
T ss_pred CCcEEEeC
Confidence 78765543
No 474
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=83.32 E-value=17 Score=27.16 Aligned_cols=173 Identities=10% Similarity=0.040 Sum_probs=0.0
Q ss_pred CCCEEEEecCCCc--EEEEeCCccccccccCCccccccCCCCc---eeecCCCCCCCCcccCCCCCcCcccccccccCCe
Q 021657 20 TEPYVLSGGKDKS--VVLWSIQDHITSSATDPATAKSAGSSGS---IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTV 94 (309)
Q Consensus 20 ~~~~l~t~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 94 (309)
+|.++.+.+.-|. |++||+.++................... .......-.++....++..+.+.+..+. ..+.=
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcc
Q ss_pred EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEE---EeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 95 EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV---DWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
+.++..... |+.+....+++.-|..+..............+|..+ .|- +|...|-.-.+..|-..|..+
T Consensus 134 WgLt~d~~~---LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V--dG~lyANVw~t~~I~rI~p~s--- 205 (262)
T COG3823 134 WGLTSDDKN---LIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV--DGELYANVWQTTRIARIDPDS--- 205 (262)
T ss_pred eeeecCCcc---eEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee--ccEEEEeeeeecceEEEcCCC---
Q ss_pred CCCCCceeeec------------cCCCCeeEEEEecCCCcEEEEe
Q 021657 172 NGVGSPINKFE------------GHSAAVLCVQWSPDKSSVFGSS 204 (309)
Q Consensus 172 ~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~ 204 (309)
++.+..+. .+..-.+.|++.|++..++++|
T Consensus 206 ---GrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 206 ---GRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred ---CcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
No 475
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=83.31 E-value=16 Score=28.33 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=46.6
Q ss_pred CCceeEEEecc------CCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEec--C-CCcEEEEecC
Q 021657 136 DADLHCVDWNP------LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP--D-KSSVFGSSAE 206 (309)
Q Consensus 136 ~~~v~~~~~~~------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~~ 206 (309)
...|+||+--+ ..-..|+.|..+|.|.|.|... ...+.++.-..-++ .+..+- | ..+-++.++.
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~a------f~il~~~~lpsvPv-~i~~~G~~devdyRI~Va~R 248 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQA------FTILKQVQLPSVPV-FISVSGQYDEVDYRIVVACR 248 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchh------heeEEEEecCCCce-EEEEEeeeeccceEEEEEeC
Confidence 45677776532 1235899999999999999987 66677766554444 232221 1 2333557888
Q ss_pred CCcEEEE
Q 021657 207 DGLLNIW 213 (309)
Q Consensus 207 dg~i~iw 213 (309)
||.|++.
T Consensus 249 dg~iy~i 255 (257)
T PF14779_consen 249 DGKIYTI 255 (257)
T ss_pred CCEEEEE
Confidence 9988764
No 476
>PRK13684 Ycf48-like protein; Provisional
Probab=83.26 E-value=23 Score=28.83 Aligned_cols=108 Identities=13% Similarity=0.183 Sum_probs=58.7
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
...+.++.+.|++ .++++ +..|.+..- ...+...-..........++++.+.+ ++..++++ ..|.+++=....
T Consensus 172 ~g~~~~i~~~~~g-~~v~~-g~~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~-~g~~~~vg-~~G~~~~~s~d~-- 244 (334)
T PRK13684 172 AGVVRNLRRSPDG-KYVAV-SSRGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQP-DGNLWMLA-RGGQIRFNDPDD-- 244 (334)
T ss_pred cceEEEEEECCCC-eEEEE-eCCceEEEE-cCCCCCeEEEeeCCCcccceeeeEcC-CCCEEEEe-cCCEEEEccCCC--
Confidence 3457888888876 55544 455655431 11221111222233456789999999 77776665 567665322222
Q ss_pred CCCCCCceeeecc----CCCCeeEEEEecCCCcEEEEecCCCcEE
Q 021657 171 SNGVGSPINKFEG----HSAAVLCVQWSPDKSSVFGSSAEDGLLN 211 (309)
Q Consensus 171 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~dg~i~ 211 (309)
+..-..... ....+..+.+.+++. ++ .++.+|.+.
T Consensus 245 ----G~sW~~~~~~~~~~~~~l~~v~~~~~~~-~~-~~G~~G~v~ 283 (334)
T PRK13684 245 ----LESWSKPIIPEITNGYGYLDLAYRTPGE-IW-AGGGNGTLL 283 (334)
T ss_pred ----CCccccccCCccccccceeeEEEcCCCC-EE-EEcCCCeEE
Confidence 221111111 123578889999877 45 445577654
No 477
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=83.24 E-value=2.3 Score=37.30 Aligned_cols=33 Identities=15% Similarity=0.464 Sum_probs=26.1
Q ss_pred ceEEEEECC----CCCEEEEecCCCcEEEEeCCcccc
Q 021657 11 AEFALAMCP----TEPYVLSGGKDKSVVLWSIQDHIT 43 (309)
Q Consensus 11 ~V~~~~~~~----~~~~l~t~~~dg~i~vwd~~~~~~ 43 (309)
.+..+++++ +..+|++-+.|+++|+||+.++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~ 252 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQC 252 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 556777777 678999999999999999998865
No 478
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=83.17 E-value=4.9 Score=25.22 Aligned_cols=54 Identities=15% Similarity=0.057 Sum_probs=33.4
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
+..+|.+.-||..+ ++...-+. .-...+.|++++|+.+++++-+.-..|.=|-+
T Consensus 33 ~~~~GRll~ydp~t------~~~~vl~~-~L~fpNGVals~d~~~vlv~Et~~~Ri~rywl 86 (89)
T PF03088_consen 33 GRPTGRLLRYDPST------KETTVLLD-GLYFPNGVALSPDESFVLVAETGRYRILRYWL 86 (89)
T ss_dssp T---EEEEEEETTT------TEEEEEEE-EESSEEEEEE-TTSSEEEEEEGGGTEEEEEES
T ss_pred CCCCcCEEEEECCC------CeEEEehh-CCCccCeEEEcCCCCEEEEEeccCceEEEEEE
Confidence 34567888899887 44333333 33467899999999988877665555544433
No 479
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=82.99 E-value=3.8 Score=19.60 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=20.2
Q ss_pred CCeEEEEcCCCcEEEEecCCCCCCCCCCceee
Q 021657 149 DNLILTGSADNSVRMFDRRNLTSNGVGSPINK 180 (309)
Q Consensus 149 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 180 (309)
+..++.++.+|.+..+|.++ ++.+.+
T Consensus 6 ~~~v~~~~~~g~l~a~d~~~------G~~~W~ 31 (33)
T smart00564 6 DGTVYVGSTDGTLYALDAKT------GEILWT 31 (33)
T ss_pred CCEEEEEcCCCEEEEEEccc------CcEEEE
Confidence 34677788899999999988 766654
No 480
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=82.73 E-value=23 Score=28.38 Aligned_cols=63 Identities=10% Similarity=0.095 Sum_probs=42.8
Q ss_pred CeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
++++.|+.+|. .+.++... ......+- +...|+++...+....|++.++....++.+++....
T Consensus 14 ~~lL~GTe~Gl-y~~~~~~~-----~~~~~kl~-~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~ 76 (302)
T smart00036 14 KWLLVGTEEGL-YVLNISDQ-----PGTLEKLI-GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALV 76 (302)
T ss_pred cEEEEEeCCce-EEEEcccC-----CCCeEEec-CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhh
Confidence 58999999884 45555431 12222232 356899999999888777666666679999996644
No 481
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=82.58 E-value=30 Score=29.57 Aligned_cols=58 Identities=16% Similarity=0.215 Sum_probs=37.6
Q ss_pred cCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec-----cCCCCeeEEEEecCC
Q 021657 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE-----GHSAAVLCVQWSPDK 197 (309)
Q Consensus 135 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~ 197 (309)
.-...+.|+|.| ++++|++--..|.|++++..... ...+..+. ........|+++|+-
T Consensus 28 GL~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~----~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 28 GLNKPWALLWGP-DNQLWVTERATGKILRVNPETGE----VKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCc----eeeeecCCceeccCCCCceeeEEECCCc
Confidence 345678999999 88777765446999999765421 11221111 135668899999874
No 482
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=80.82 E-value=5.2 Score=35.69 Aligned_cols=70 Identities=13% Similarity=0.148 Sum_probs=46.2
Q ss_pred CCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 136 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 136 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
...++++.-+| .++-++.++.||.|++|+.-... ...+.+.. .+-..+.|...| | ++...|..+.-|.-
T Consensus 14 ~e~~~aiqshp-~~~s~v~~~~d~si~lfn~~~r~----qski~~~~---~p~~nlv~tnhg--l-~~~tsdrr~la~~~ 82 (1636)
T KOG3616|consen 14 DEFTTAIQSHP-GGQSFVLAHQDGSIILFNFIPRR----QSKICEEA---KPKENLVFTNHG--L-VTATSDRRALAWKE 82 (1636)
T ss_pred cceeeeeeecC-CCceEEEEecCCcEEEEeecccc----hhhhhhhc---CCccceeeeccc--e-EEEeccchhheeec
Confidence 45577888899 99999999999999999976521 11233322 233456676666 3 35556777766754
Q ss_pred C
Q 021657 216 E 216 (309)
Q Consensus 216 ~ 216 (309)
+
T Consensus 83 d 83 (1636)
T KOG3616|consen 83 D 83 (1636)
T ss_pred c
Confidence 4
No 483
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=80.60 E-value=29 Score=28.16 Aligned_cols=170 Identities=12% Similarity=0.108 Sum_probs=86.5
Q ss_pred CeEEEEEecCCCcEEEEEcCC------CeEEEEEcCCCCcceE----E---------EeeccCCceeEEEeccCCCCeEE
Q 021657 93 TVEDVTFCPSSAQEFCSVGDD------SCLILWDARVGTSPVI----K---------VEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~----~---------~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
...+|++.+++ .++++.-.+ ..|..++.. ++.... . .........-+|+++| +++.|+
T Consensus 86 D~Egi~~~~~g-~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~-dG~~l~ 162 (326)
T PF13449_consen 86 DPEGIAVPPDG-SFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSP-DGRTLF 162 (326)
T ss_pred ChhHeEEecCC-CEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECC-CCCEEE
Confidence 45677886666 666666566 678888865 432101 1 0112345688999999 888666
Q ss_pred EEcCC-----C--c-------EEEEecCCCCC-CCCCCceeeecc-----CCCCeeEEEEecCCCcEEEEec----CCCc
Q 021657 154 TGSAD-----N--S-------VRMFDRRNLTS-NGVGSPINKFEG-----HSAAVLCVQWSPDKSSVFGSSA----EDGL 209 (309)
Q Consensus 154 ~~~~d-----g--~-------i~i~d~~~~~~-~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~----~dg~ 209 (309)
++... + . ++++....... ....+....+.. ....+..+.+-++++.++.--+ ....
T Consensus 163 ~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~ 242 (326)
T PF13449_consen 163 AAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNY 242 (326)
T ss_pred EEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccce
Confidence 55332 2 1 55554443110 000122223332 3467889999999985432222 2345
Q ss_pred EEEEeCCcccc--cccC--CC--CCcCCCCceeeeecC---CCcceeeEEEcc--CCCeEEEEecCC
Q 021657 210 LNIWDYEKVGK--KVEQ--GP--RTTNYPAGLFFQHAG---HRDKVVDFHWNA--SDPWTVVSVSDD 265 (309)
Q Consensus 210 i~iwd~~~~~~--~~~~--~~--~~~~~~~~~~~~~~~---~~~~v~~~~~~~--~~~~~~~s~s~d 265 (309)
++||.+..... .... .. .........+..+.. ....+-.|+|.| ++...++..|+|
T Consensus 243 ~ri~~v~l~~at~~~~~~~l~~~~~~~~~k~ll~d~~~~g~~~dn~EGma~~p~~~g~~~l~lvsDn 309 (326)
T PF13449_consen 243 KRIYRVDLSDATDVPGIESLEGADIKPVKKELLFDLSPLGLPIDNFEGMAVGPRLDGRRTLYLVSDN 309 (326)
T ss_pred EEEEEEEcccccccccccccccccccccccccccccccccCccCceeeEEEeeccCCCEEEEEEECC
Confidence 66666553211 1000 00 000111222222222 256678899976 566666666665
No 484
>PLN02153 epithiospecifier protein
Probab=79.90 E-value=31 Score=28.11 Aligned_cols=62 Identities=10% Similarity=0.223 Sum_probs=32.8
Q ss_pred cEEEEEcCC-----CeEEEEEcCCCCcceEEEee----ccCCceeEEEeccCCCCeEEEEcCC-----------CcEEEE
Q 021657 105 QEFCSVGDD-----SCLILWDARVGTSPVIKVEK----AHDADLHCVDWNPLDDNLILTGSAD-----------NSVRMF 164 (309)
Q Consensus 105 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d-----------g~i~i~ 164 (309)
.+++.|+.+ ..+.+||..+.+......+. .....-.+++.. ++++++.|+.+ ..+.+|
T Consensus 87 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~v~~y 164 (341)
T PLN02153 87 KLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASD--ENHVYVFGGVSKGGLMKTPERFRTIEAY 164 (341)
T ss_pred EEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEE--CCEEEEECCccCCCccCCCcccceEEEE
Confidence 667777653 35778888776543222211 001111223332 46677777754 246778
Q ss_pred ecCC
Q 021657 165 DRRN 168 (309)
Q Consensus 165 d~~~ 168 (309)
|..+
T Consensus 165 d~~~ 168 (341)
T PLN02153 165 NIAD 168 (341)
T ss_pred ECCC
Confidence 8876
No 485
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=79.34 E-value=41 Score=31.34 Aligned_cols=82 Identities=20% Similarity=0.139 Sum_probs=56.9
Q ss_pred CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE-EcCCC-----cEEEEecCCCCCCCCCCceeeeccCCC
Q 021657 113 DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT-GSADN-----SVRMFDRRNLTSNGVGSPINKFEGHSA 186 (309)
Q Consensus 113 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~ 186 (309)
.+.|.+-|..... .......+..+|.+-+|+| +|+.++- .+.++ .|++-|+++. +.-+.++...+.
T Consensus 328 ~~~L~~~D~dG~n--~~~ve~~~~~~i~sP~~SP-DG~~vAY~ts~e~~~g~s~vYv~~L~t~-----~~~~vkl~ve~a 399 (912)
T TIGR02171 328 TGNLAYIDYTKGA--SRAVEIEDTISVYHPDISP-DGKKVAFCTGIEGLPGKSSVYVRNLNAS-----GSGLVKLPVENA 399 (912)
T ss_pred CCeEEEEecCCCC--ceEEEecCCCceecCcCCC-CCCEEEEEEeecCCCCCceEEEEehhcc-----CCCceEeecccc
Confidence 3578888876555 2223245678899999999 8988876 44443 5888899875 444556666677
Q ss_pred CeeEEEEecCCCcEEE
Q 021657 187 AVLCVQWSPDKSSVFG 202 (309)
Q Consensus 187 ~v~~~~~~~~~~~l~~ 202 (309)
.|-.-...++|..+++
T Consensus 400 aiprwrv~e~gdt~iv 415 (912)
T TIGR02171 400 AIPRWRVLENGDTVIV 415 (912)
T ss_pred cccceEecCCCCeEEE
Confidence 7877777887776543
No 486
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=78.96 E-value=6.6 Score=19.79 Aligned_cols=27 Identities=22% Similarity=0.445 Sum_probs=22.1
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeecc
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEG 183 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 183 (309)
.++.++.+|.++-+|.++ ++.+..++.
T Consensus 2 ~v~~~~~~g~l~AlD~~T------G~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKT------GKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTT------TSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCC------CCEEEeeeC
Confidence 356668999999999999 888888764
No 487
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=78.45 E-value=39 Score=28.37 Aligned_cols=109 Identities=12% Similarity=0.174 Sum_probs=61.1
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc---eEEEee-c-cCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP---VIKVEK-A-HDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
...++.+.|.+++ .++++ +.+|.+.. ....++.- ...... . ....+..+.|.+ ++..+++| ..|.+..-.
T Consensus 280 ~~~l~~v~~~~dg-~l~l~-g~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~-d~~~~a~G-~~G~v~~s~ 354 (398)
T PLN00033 280 ARRIQNMGWRADG-GLWLL-TRGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRS-KKEAWAAG-GSGILLRST 354 (398)
T ss_pred ccceeeeeEcCCC-CEEEE-eCCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcC-CCcEEEEE-CCCcEEEeC
Confidence 4568899998887 55544 46676543 33333310 011111 1 223588899987 66665555 677666543
Q ss_pred cCCCCCCCCCCceeee---ccCCCCeeEEEEecCCCcEEEEecCCCcEEEE
Q 021657 166 RRNLTSNGVGSPINKF---EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iw 213 (309)
.. ++.-... ..-...++.+.|.++++ .+ ..+.+|.|.-|
T Consensus 355 -D~------G~tW~~~~~~~~~~~~ly~v~f~~~~~-g~-~~G~~G~il~~ 396 (398)
T PLN00033 355 -DG------GKSWKRDKGADNIAANLYSVKFFDDKK-GF-VLGNDGVLLRY 396 (398)
T ss_pred -CC------CcceeEccccCCCCcceeEEEEcCCCc-eE-EEeCCcEEEEe
Confidence 22 3332222 22245688999988776 45 44558877654
No 488
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=77.61 E-value=55 Score=29.67 Aligned_cols=76 Identities=11% Similarity=0.029 Sum_probs=42.3
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceE-EEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI-KVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.+..+.-..+.+-.+.|+.+. .|++-..+|++.+|++........ ..+......|..+.+.. +|-.+++ .+|.+
T Consensus 75 lL~~~~w~~~~lI~mgWs~~e--eLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~-~GVavlt--~~g~v 149 (829)
T KOG2280|consen 75 LLGRILWKHGELIGMGWSDDE--ELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFH-NGVAVLT--VSGQV 149 (829)
T ss_pred chHHHHhcCCCeeeecccCCc--eEEEEeccceEEEeecchhhhcccccccccccCceeEEEEec-CceEEEe--cCCcE
Confidence 343333334478899998875 577778999999999864331110 11122233455555554 4544443 34544
Q ss_pred EE
Q 021657 162 RM 163 (309)
Q Consensus 162 ~i 163 (309)
.+
T Consensus 150 ~~ 151 (829)
T KOG2280|consen 150 IL 151 (829)
T ss_pred EE
Confidence 44
No 489
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=77.36 E-value=15 Score=23.07 Aligned_cols=40 Identities=18% Similarity=0.178 Sum_probs=26.0
Q ss_pred CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 112 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 112 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
.+|.+.-||..+++ ...+...-.-.+.+++++ ++..++.+
T Consensus 35 ~~GRll~ydp~t~~---~~vl~~~L~fpNGVals~-d~~~vlv~ 74 (89)
T PF03088_consen 35 PTGRLLRYDPSTKE---TTVLLDGLYFPNGVALSP-DESFVLVA 74 (89)
T ss_dssp --EEEEEEETTTTE---EEEEEEEESSEEEEEE-T-TSSEEEEE
T ss_pred CCcCEEEEECCCCe---EEEehhCCCccCeEEEcC-CCCEEEEE
Confidence 46889999998877 223333344678999999 88766665
No 490
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=77.04 E-value=21 Score=24.47 Aligned_cols=119 Identities=8% Similarity=0.063 Sum_probs=68.7
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
..-.|.....-|+.++.-|+|.|.+.......... ....+..+. -..
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~--------------------------------~~~~i~~LN-in~ 48 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGR--------------------------------QDSDISFLN-INQ 48 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCcccccccc--------------------------------ccCceeEEE-CCC
Confidence 34567777778999999999999987643111100 111122222 345
Q ss_pred CeEEEEEec----CCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC--CCCeEEEEcCCCcEEEEec
Q 021657 93 TVEDVTFCP----SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL--DDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 93 ~v~~~~~~~----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~ 166 (309)
.|++++-.+ ++...|+.|+. ..|..||+..... ...+.-.+.|.++.+-.. ...-++..+.+..|.-||.
T Consensus 49 ~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~N~d---~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~ 124 (136)
T PF14781_consen 49 EITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVENNSD---LFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDY 124 (136)
T ss_pred ceEEEEEEecCCCCCcCEEEEecc-ceEEEEEcccCch---hhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCC
Confidence 677776544 23456777665 5799999987662 222334467777776321 1233444444666777776
Q ss_pred CC
Q 021657 167 RN 168 (309)
Q Consensus 167 ~~ 168 (309)
.-
T Consensus 125 ~G 126 (136)
T PF14781_consen 125 EG 126 (136)
T ss_pred CC
Confidence 53
No 491
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=76.28 E-value=48 Score=30.81 Aligned_cols=73 Identities=10% Similarity=0.072 Sum_probs=49.5
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC----------------------cceEEEeeccCCceeEEEeccCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT----------------------SPVIKVEKAHDADLHCVDWNPLDD 149 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----------------------~~~~~~~~~~~~~v~~~~~~~~~~ 149 (309)
-.|.|+.-..+| +.|++|-.| +.+|.+.-.. .|....+.-|...|..++.+. ..
T Consensus 182 inV~civs~e~G-rIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDq-sR 257 (1263)
T COG5308 182 INVRCIVSEEDG-RIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQ-SR 257 (1263)
T ss_pred ceeEEEEeccCC-cEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeecc-cc
Confidence 457788777777 888888777 6777763211 011222334567888888887 67
Q ss_pred CeEEEEcCCCcEEEEecCC
Q 021657 150 NLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~ 168 (309)
..+.+-.....|+-|.+..
T Consensus 258 g~ly~Lr~kS~Vray~itk 276 (1263)
T COG5308 258 GLLYVLRKKSAVRAYSITK 276 (1263)
T ss_pred cceeeecccceeeeEeeec
Confidence 7788878888888887765
No 492
>PLN02193 nitrile-specifier protein
Probab=76.20 E-value=50 Score=28.48 Aligned_cols=104 Identities=8% Similarity=0.084 Sum_probs=50.3
Q ss_pred cEEEEEcCC-----CeEEEEEcCCCCcceEEEee--ccCCceeEEEeccCCCCeEEEEcCCC-----cEEEEecCCCCCC
Q 021657 105 QEFCSVGDD-----SCLILWDARVGTSPVIKVEK--AHDADLHCVDWNPLDDNLILTGSADN-----SVRMFDRRNLTSN 172 (309)
Q Consensus 105 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~ 172 (309)
.+++.|+.+ ..+..+|+.+.+...+.... .....-.+++.. ++++++.|+.++ .+..||+.+..
T Consensus 230 ~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~--~~~iYv~GG~~~~~~~~~~~~yd~~t~~-- 305 (470)
T PLN02193 230 TLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAAD--EENVYVFGGVSATARLKTLDSYNIVDKK-- 305 (470)
T ss_pred EEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEE--CCEEEEECCCCCCCCcceEEEEECCCCE--
Confidence 667777754 35788888876643222211 011111222222 566777777543 36677776522
Q ss_pred CCCCceeee---ccCCCCeeEEEEecCCCcEEEEecCC----CcEEEEeCCc
Q 021657 173 GVGSPINKF---EGHSAAVLCVQWSPDKSSVFGSSAED----GLLNIWDYEK 217 (309)
Q Consensus 173 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~d----g~i~iwd~~~ 217 (309)
...+... ....... .++. -+++ +++.++.+ ..+.+||+.+
T Consensus 306 --W~~~~~~~~~~~~R~~~-~~~~-~~gk-iyviGG~~g~~~~dv~~yD~~t 352 (470)
T PLN02193 306 --WFHCSTPGDSFSIRGGA-GLEV-VQGK-VWVVYGFNGCEVDDVHYYDPVQ 352 (470)
T ss_pred --EEeCCCCCCCCCCCCCc-EEEE-ECCc-EEEEECCCCCccCceEEEECCC
Confidence 1111110 0011111 1222 2444 56666655 4588888876
No 493
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=76.18 E-value=16 Score=22.78 Aligned_cols=30 Identities=7% Similarity=0.112 Sum_probs=25.2
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+.+.++|++.++.++.... +.|++|+..
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~-------~~I~vy~~~ 84 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLA-------HSIHVYKRH 84 (86)
T ss_pred CCceEEEcCCCCEEEEEeccC-------CeEEEEEec
Confidence 457899999999999876666 899999876
No 494
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=76.17 E-value=64 Score=29.65 Aligned_cols=72 Identities=26% Similarity=0.476 Sum_probs=42.3
Q ss_pred eeEEEeccCCCCeEEEEcCCC-----cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEE
Q 021657 139 LHCVDWNPLDDNLILTGSADN-----SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 213 (309)
Q Consensus 139 v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iw 213 (309)
-..+.|-| .|..+++-..|| .|+++....... +..-... +.......++|+-... +++. ...+.+.+|
T Consensus 249 e~~LSWkp-qgS~~ati~td~~~~S~~ViFfErNGLrH---Gef~lr~-~~dEk~~~~~wn~~s~-vlav-~~~n~~~lw 321 (1243)
T COG5290 249 EHQLSWKP-QGSKYATIGTDGCSTSESVIFFERNGLRH---GEFDLRV-GCDEKAFLENWNLLST-VLAV-AEGNLLKLW 321 (1243)
T ss_pred hhcccccc-CCceeeeeccCCCCCcceEEEEccCCccc---CCccccC-CchhhhhhhhhhHHHH-HHHH-hhcceEEEE
Confidence 34578999 899999877554 356665432110 2211111 1234456778877666 3433 446789999
Q ss_pred eCCc
Q 021657 214 DYEK 217 (309)
Q Consensus 214 d~~~ 217 (309)
-..+
T Consensus 322 ttkN 325 (1243)
T COG5290 322 TTKN 325 (1243)
T ss_pred Eccc
Confidence 8876
No 495
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=76.03 E-value=52 Score=28.51 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=35.9
Q ss_pred CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCC---e
Q 021657 112 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA---V 188 (309)
Q Consensus 112 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~---v 188 (309)
..+...+.|.. +. ++..+.........+...+ +|.+++... ..+..+|+. ++.+..+...... -
T Consensus 126 ~~~~~~~iD~~-G~--Vrw~~~~~~~~~~~~~~l~-nG~ll~~~~--~~~~e~D~~-------G~v~~~~~l~~~~~~~H 192 (477)
T PF05935_consen 126 SSSYTYLIDNN-GD--VRWYLPLDSGSDNSFKQLP-NGNLLIGSG--NRLYEIDLL-------GKVIWEYDLPGGYYDFH 192 (477)
T ss_dssp BEEEEEEEETT-S---EEEEE-GGGT--SSEEE-T-TS-EEEEEB--TEEEEE-TT---------EEEEEE--TTEE-B-
T ss_pred CCceEEEECCC-cc--EEEEEccCccccceeeEcC-CCCEEEecC--CceEEEcCC-------CCEEEeeecCCcccccc
Confidence 44556666643 44 2333322222222256667 788777655 778888876 5665555433322 3
Q ss_pred eEEEEecCCCcEEEEe
Q 021657 189 LCVQWSPDKSSVFGSS 204 (309)
Q Consensus 189 ~~~~~~~~~~~l~~~~ 204 (309)
..+...|+|..|+.+.
T Consensus 193 HD~~~l~nGn~L~l~~ 208 (477)
T PF05935_consen 193 HDIDELPNGNLLILAS 208 (477)
T ss_dssp S-EEE-TTS-EEEEEE
T ss_pred cccEECCCCCEEEEEe
Confidence 4566778887655443
No 496
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=75.13 E-value=71 Score=29.64 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=46.7
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCC----Cc---eeeec--c----CCCCeeEEEEecCCCcEEEE
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG----SP---INKFE--G----HSAAVLCVQWSPDKSSVFGS 203 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~---~~~~~--~----~~~~v~~~~~~~~~~~l~~~ 203 (309)
..|.+++... -+..++....||+|.++|..+.+..... .. +..+. + ....+..++|||.+.- ++.
T Consensus 260 ~~V~si~~~~-~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~-~v~ 337 (753)
T PF11635_consen 260 KRVVSITSPE-LDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCS-LVQ 337 (753)
T ss_pred CeEEEEEecc-cCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccce-EEE
Confidence 4577777766 6778999999999999998885321111 11 11110 0 1113445889999985 557
Q ss_pred ecCCCcEE
Q 021657 204 SAEDGLLN 211 (309)
Q Consensus 204 ~~~dg~i~ 211 (309)
-..+|.+.
T Consensus 338 ~~~~~~~~ 345 (753)
T PF11635_consen 338 IDEDGKTK 345 (753)
T ss_pred EecCCCce
Confidence 77788866
No 497
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=74.92 E-value=41 Score=26.86 Aligned_cols=27 Identities=15% Similarity=0.341 Sum_probs=24.2
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQ 39 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~ 39 (309)
+.|+++|.+.+-++....+...+||..
T Consensus 26 WGia~~p~~~~WVadngT~~~TlYdg~ 52 (336)
T TIGR03118 26 WGLSYRPGGPFWVANTGTGTATLYVGN 52 (336)
T ss_pred ceeEecCCCCEEEecCCcceEEeecCC
Confidence 789999999888888888999999986
No 498
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=74.53 E-value=7.4 Score=18.08 Aligned_cols=26 Identities=12% Similarity=0.394 Sum_probs=19.8
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
..|.+++.. ..+++++...+.+|+|.
T Consensus 2 E~i~aia~g---~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAG---DSWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEcc---CCEEEEEeCCCeEEecC
Confidence 356777774 47888888889999873
No 499
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=74.29 E-value=44 Score=26.83 Aligned_cols=61 Identities=7% Similarity=0.021 Sum_probs=39.2
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE-EcCCCcEEEEecCCC
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT-GSADNSVRMFDRRNL 169 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~ 169 (309)
.+|+.|.++|- .+.++........+. .+...|+++...+ ..+.|++ ++....++.+++...
T Consensus 14 ~~lL~GTe~Gl-y~~~~~~~~~~~~kl--~~~~~v~q~~v~~-~~~lLi~Lsgk~~~L~~~~L~~L 75 (302)
T smart00036 14 KWLLVGTEEGL-YVLNISDQPGTLEKL--IGRRSVTQIWVLE-ENNVLLMISGKKPQLYSHPLSAL 75 (302)
T ss_pred cEEEEEeCCce-EEEEcccCCCCeEEe--cCcCceEEEEEEh-hhCEEEEEeCCcceEEEEEHHHh
Confidence 57889999984 455565421112333 3567899999998 5555544 444456999998653
No 500
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=73.71 E-value=51 Score=27.39 Aligned_cols=42 Identities=10% Similarity=0.000 Sum_probs=21.1
Q ss_pred CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 114 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..+.+||..+.++.....+......-.++... ++++++.|+.
T Consensus 189 ~~v~~YD~~t~~W~~~~~~p~~~~~~~a~v~~--~~~iYv~GG~ 230 (376)
T PRK14131 189 KEVLSYDPSTNQWKNAGESPFLGTAGSAVVIK--GNKLWLINGE 230 (376)
T ss_pred ceEEEEECCCCeeeECCcCCCCCCCcceEEEE--CCEEEEEeee
Confidence 35889998877753322222111112233332 4666667664
Done!