Query 021657
Match_columns 309
No_of_seqs 468 out of 1508
Neff 12.0
Searched_HMMs 29240
Date Mon Mar 25 07:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021657.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021657hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.4E-46 4.9E-51 297.2 24.3 267 2-309 7-280 (304)
2 1vyh_C Platelet-activating fac 100.0 6.5E-46 2.2E-50 305.1 27.3 265 2-309 102-390 (410)
3 3ow8_A WD repeat-containing pr 100.0 3.2E-46 1.1E-50 297.1 24.3 267 2-309 26-300 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 4.4E-44 1.5E-48 287.4 26.2 266 2-309 49-322 (340)
5 4g56_B MGC81050 protein; prote 100.0 1.3E-43 4.5E-48 286.1 27.0 264 4-309 38-321 (357)
6 2pbi_B Guanine nucleotide-bind 100.0 1.9E-43 6.6E-48 284.9 27.4 268 2-309 58-336 (354)
7 4gqb_B Methylosome protein 50; 100.0 2.2E-43 7.4E-48 282.8 25.9 227 7-309 81-309 (344)
8 4gqb_B Methylosome protein 50; 100.0 5.7E-43 1.9E-47 280.4 26.9 209 4-282 123-331 (344)
9 3iz6_a 40S ribosomal protein R 100.0 1.9E-43 6.4E-48 287.9 23.6 275 2-309 60-354 (380)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.5E-43 8.4E-48 283.5 23.9 292 1-309 8-313 (345)
11 3ow8_A WD repeat-containing pr 100.0 2E-42 7E-47 275.1 26.5 242 3-281 75-320 (321)
12 2pm7_B Protein transport prote 100.0 1.2E-41 4.1E-46 268.1 29.9 244 2-309 3-264 (297)
13 3frx_A Guanine nucleotide-bind 100.0 6.3E-42 2.2E-46 272.3 26.0 231 2-309 11-247 (319)
14 4ery_A WD repeat-containing pr 100.0 1.6E-41 5.3E-46 269.6 26.6 266 2-309 17-289 (312)
15 1nr0_A Actin interacting prote 100.0 2.1E-41 7.2E-46 291.8 29.6 281 2-309 53-377 (611)
16 1vyh_C Platelet-activating fac 100.0 7.4E-42 2.5E-46 281.0 24.7 243 2-281 144-410 (410)
17 1erj_A Transcriptional repress 100.0 2.9E-41 9.9E-46 276.2 23.3 272 6-309 62-362 (393)
18 2xzm_R RACK1; ribosome, transl 100.0 5.3E-40 1.8E-44 264.0 27.5 234 2-309 15-265 (343)
19 1got_B GT-beta; complex (GTP-b 100.0 2.9E-40 9.9E-45 265.2 25.5 240 2-279 91-340 (340)
20 3bg1_A Protein SEC13 homolog; 100.0 6.3E-41 2.2E-45 266.2 21.0 241 3-309 8-272 (316)
21 2hes_X YDR267CP; beta-propelle 100.0 3.2E-40 1.1E-44 263.8 25.0 242 2-309 8-260 (330)
22 4g56_B MGC81050 protein; prote 100.0 3.5E-40 1.2E-44 266.1 25.3 209 4-282 135-343 (357)
23 2ymu_A WD-40 repeat protein; u 100.0 1.9E-39 6.3E-44 278.5 25.1 260 2-309 297-559 (577)
24 3iz6_a 40S ribosomal protein R 100.0 5.7E-39 1.9E-43 261.5 25.4 246 2-281 102-374 (380)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.2E-39 1.8E-43 258.3 24.0 260 4-282 57-335 (345)
26 2hes_X YDR267CP; beta-propelle 100.0 1.4E-38 4.7E-43 254.3 26.0 240 7-309 57-305 (330)
27 4e54_B DNA damage-binding prot 100.0 1.1E-39 3.9E-44 270.3 19.8 213 3-282 114-327 (435)
28 3frx_A Guanine nucleotide-bind 100.0 5.6E-38 1.9E-42 249.6 27.7 225 2-309 59-296 (319)
29 3dwl_C Actin-related protein 2 100.0 1E-39 3.4E-44 265.9 17.1 243 4-309 7-261 (377)
30 3jrp_A Fusion protein of prote 100.0 3.4E-38 1.2E-42 256.8 25.9 244 1-309 4-266 (379)
31 2xzm_R RACK1; ribosome, transl 100.0 4.5E-38 1.5E-42 252.8 25.2 230 2-309 70-319 (343)
32 2pm7_B Protein transport prote 100.0 1.6E-37 5.6E-42 244.5 27.8 215 2-281 47-284 (297)
33 2pbi_B Guanine nucleotide-bind 100.0 3.9E-38 1.3E-42 253.9 24.8 241 3-279 101-354 (354)
34 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-37 5.9E-42 254.8 26.9 238 2-309 75-323 (402)
35 4aow_A Guanine nucleotide-bind 100.0 2.2E-37 7.5E-42 248.4 26.6 233 2-309 32-266 (340)
36 3dm0_A Maltose-binding peripla 100.0 1.2E-37 4.2E-42 272.4 26.9 231 3-309 377-612 (694)
37 1sq9_A Antiviral protein SKI8; 100.0 2.8E-38 9.7E-43 259.0 21.3 266 2-309 10-364 (397)
38 2ynn_A Coatomer subunit beta'; 100.0 1.5E-37 5E-42 245.6 24.3 246 2-281 49-301 (304)
39 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-37 7.3E-42 251.6 24.4 246 2-309 2-254 (372)
40 2xyi_A Probable histone-bindin 100.0 2.8E-37 9.7E-42 255.5 24.7 251 4-309 124-388 (430)
41 1nr0_A Actin interacting prote 100.0 1.8E-37 6E-42 267.4 24.3 222 7-309 17-249 (611)
42 2j04_B YDR362CP, TAU91; beta p 100.0 6.1E-38 2.1E-42 263.2 20.7 214 4-281 203-427 (524)
43 2pm9_A Protein WEB1, protein t 100.0 2E-37 6.7E-42 255.5 23.2 246 6-284 65-339 (416)
44 3f3f_A Nucleoporin SEH1; struc 100.0 1E-36 3.5E-41 245.1 26.5 242 2-309 5-316 (351)
45 3k26_A Polycomb protein EED; W 100.0 1.4E-37 4.7E-42 252.0 21.5 278 3-309 13-345 (366)
46 3ei3_B DNA damage-binding prot 100.0 9.3E-37 3.2E-41 248.9 25.9 221 2-298 67-292 (383)
47 1gxr_A ESG1, transducin-like e 100.0 1.1E-36 3.8E-41 243.9 25.2 258 5-309 48-316 (337)
48 2ymu_A WD-40 repeat protein; u 100.0 9.4E-37 3.2E-41 261.7 26.3 260 2-309 256-518 (577)
49 4ery_A WD repeat-containing pr 100.0 1.2E-36 4.1E-41 241.5 24.7 245 2-281 59-311 (312)
50 4a11_B DNA excision repair pro 100.0 5.3E-36 1.8E-40 246.2 29.0 263 2-309 37-344 (408)
51 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-37 7.6E-42 275.6 22.4 267 2-309 7-280 (814)
52 2pm9_A Protein WEB1, protein t 100.0 5E-38 1.7E-42 259.1 16.8 264 11-309 14-315 (416)
53 4gga_A P55CDC, cell division c 100.0 1E-36 3.4E-41 251.6 24.1 247 4-282 143-395 (420)
54 3vl1_A 26S proteasome regulato 100.0 9.9E-38 3.4E-42 257.7 17.7 259 11-308 58-344 (420)
55 3mmy_A MRNA export factor; mRN 100.0 2.2E-36 7.6E-41 245.0 24.6 232 2-309 33-325 (368)
56 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-36 5E-41 240.8 23.0 257 2-309 12-276 (313)
57 4aez_A CDC20, WD repeat-contai 100.0 2E-36 6.9E-41 248.3 24.4 239 7-281 133-379 (401)
58 3zwl_B Eukaryotic translation 100.0 2.4E-36 8E-41 245.0 24.5 274 2-309 26-325 (369)
59 3i2n_A WD repeat-containing pr 100.0 6.8E-37 2.3E-41 247.2 20.8 278 3-309 13-331 (357)
60 3bg1_A Protein SEC13 homolog; 100.0 2.9E-37 9.8E-42 245.2 17.6 218 2-281 51-292 (316)
61 1r5m_A SIR4-interacting protei 100.0 1.8E-36 6E-41 250.3 22.2 259 6-309 106-404 (425)
62 1erj_A Transcriptional repress 100.0 1.5E-35 5E-40 242.4 27.1 243 11-282 125-389 (393)
63 3gre_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 258.0 15.3 257 2-282 56-359 (437)
64 3jro_A Fusion protein of prote 100.0 2.5E-36 8.4E-41 265.7 22.9 244 1-309 2-264 (753)
65 4h5i_A Guanine nucleotide-exch 100.0 1.5E-35 5E-40 239.8 24.2 205 7-282 132-343 (365)
66 3vl1_A 26S proteasome regulato 100.0 7.4E-36 2.5E-40 246.4 22.5 234 2-309 133-395 (420)
67 2xyi_A Probable histone-bindin 100.0 2.2E-35 7.4E-40 244.2 25.1 233 2-282 175-410 (430)
68 4aow_A Guanine nucleotide-bind 100.0 2.8E-35 9.5E-40 236.2 24.7 251 2-281 80-336 (340)
69 1r5m_A SIR4-interacting protei 100.0 4.8E-36 1.6E-40 247.7 20.8 257 7-309 44-340 (425)
70 1k8k_C P40, ARP2/3 complex 41 100.0 2.6E-35 8.9E-40 239.3 24.4 215 2-282 46-274 (372)
71 1yfq_A Cell cycle arrest prote 100.0 2.8E-36 9.7E-41 242.2 18.5 266 2-306 5-301 (342)
72 3dw8_B Serine/threonine-protei 100.0 9.7E-36 3.3E-40 247.7 20.0 241 7-282 27-373 (447)
73 3i2n_A WD repeat-containing pr 100.0 6.4E-35 2.2E-39 235.6 23.9 259 6-282 63-353 (357)
74 1sq9_A Antiviral protein SKI8; 100.0 1.1E-35 3.9E-40 243.6 19.6 245 2-281 56-394 (397)
75 3dm0_A Maltose-binding peripla 100.0 1.3E-34 4.3E-39 253.4 27.1 204 2-282 424-632 (694)
76 2j04_B YDR362CP, TAU91; beta p 100.0 4.7E-36 1.6E-40 251.8 17.3 188 86-309 202-407 (524)
77 4aez_A CDC20, WD repeat-contai 100.0 2.9E-35 9.9E-40 241.4 21.4 264 5-309 88-359 (401)
78 3dwl_C Actin-related protein 2 100.0 5.8E-35 2E-39 237.8 22.7 203 1-217 48-281 (377)
79 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-34 7.4E-39 266.9 28.8 242 3-309 610-892 (1249)
80 3v7d_B Cell division control p 100.0 1.5E-34 5.2E-39 241.7 25.2 230 2-309 115-362 (464)
81 3v7d_B Cell division control p 100.0 1.3E-34 4.6E-39 242.0 24.8 260 2-309 156-443 (464)
82 4h5i_A Guanine nucleotide-exch 100.0 4E-35 1.4E-39 237.2 20.6 263 9-309 14-322 (365)
83 3zwl_B Eukaryotic translation 100.0 1.3E-34 4.6E-39 234.6 23.4 246 2-282 68-346 (369)
84 2oaj_A Protein SNI1; WD40 repe 100.0 1E-34 3.5E-39 259.0 24.1 236 4-308 13-280 (902)
85 4ggc_A P55CDC, cell division c 100.0 3.2E-34 1.1E-38 227.9 24.5 247 4-282 63-315 (318)
86 1pgu_A Actin interacting prote 100.0 3.4E-34 1.2E-38 247.5 26.0 263 2-309 57-348 (615)
87 4e54_B DNA damage-binding prot 100.0 7E-35 2.4E-39 241.6 20.0 245 3-309 159-410 (435)
88 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-34 1.2E-38 238.2 23.9 255 2-309 153-417 (445)
89 1gxr_A ESG1, transducin-like e 100.0 1.1E-33 3.8E-38 226.5 25.6 236 6-281 95-336 (337)
90 3jrp_A Fusion protein of prote 100.0 1.1E-33 3.9E-38 230.1 25.4 219 2-281 49-286 (379)
91 3f3f_A Nucleoporin SEH1; struc 100.0 3.8E-34 1.3E-38 230.1 21.6 235 2-282 51-337 (351)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-33 6.2E-38 234.1 26.2 245 5-309 99-364 (450)
93 1p22_A F-BOX/WD-repeat protein 100.0 4.6E-34 1.6E-38 236.7 22.0 241 2-282 167-414 (435)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-33 5.7E-38 234.1 25.4 258 2-309 112-372 (445)
95 4gq1_A NUP37; propeller, trans 100.0 1E-34 3.5E-39 237.3 17.8 247 11-309 91-369 (393)
96 1p22_A F-BOX/WD-repeat protein 100.0 4.1E-34 1.4E-38 237.1 21.3 258 6-308 131-394 (435)
97 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-33 5.1E-38 232.1 23.7 241 11-309 17-277 (588)
98 3odt_A Protein DOA1; ubiquitin 100.0 2E-33 6.9E-38 222.8 23.9 236 2-282 53-296 (313)
99 3sfz_A APAF-1, apoptotic pepti 100.0 6.5E-35 2.2E-39 270.4 17.3 263 2-309 876-1188(1249)
100 3k26_A Polycomb protein EED; W 100.0 1.4E-34 4.9E-39 234.3 16.4 248 7-281 68-365 (366)
101 3ei3_B DNA damage-binding prot 100.0 2.4E-33 8E-38 228.8 23.6 242 5-309 115-362 (383)
102 2oaj_A Protein SNI1; WD40 repe 100.0 6.4E-34 2.2E-38 253.9 20.9 193 90-306 434-687 (902)
103 3lrv_A PRE-mRNA-splicing facto 100.0 5.3E-34 1.8E-38 229.1 18.4 233 16-282 43-292 (343)
104 1pgu_A Actin interacting prote 100.0 1.9E-33 6.5E-38 242.8 22.1 227 5-308 15-262 (615)
105 4gga_A P55CDC, cell division c 100.0 2.5E-32 8.4E-37 225.3 26.5 259 12-309 108-374 (420)
106 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-32 3.6E-37 222.3 23.1 260 3-282 14-336 (355)
107 3gre_A Serine/threonine-protei 100.0 1.1E-33 3.9E-38 234.6 17.6 255 6-279 109-437 (437)
108 4a11_B DNA excision repair pro 100.0 2E-32 6.8E-37 224.9 24.3 245 5-282 96-365 (408)
109 2aq5_A Coronin-1A; WD40 repeat 100.0 2.4E-32 8.1E-37 224.2 22.9 227 13-309 38-277 (402)
110 2j04_A TAU60, YPL007P, hypothe 100.0 7E-32 2.4E-36 222.2 25.0 221 6-309 83-340 (588)
111 4ggc_A P55CDC, cell division c 100.0 1.5E-31 5.2E-36 212.5 25.7 259 12-309 28-294 (318)
112 3jro_A Fusion protein of prote 100.0 1.8E-32 6.2E-37 241.2 22.2 220 2-282 47-285 (753)
113 4gq1_A NUP37; propeller, trans 100.0 1.4E-32 4.8E-37 224.6 19.9 209 2-281 130-388 (393)
114 2w18_A PALB2, fancn, partner a 100.0 8.9E-32 3.1E-36 208.6 22.1 215 11-281 113-356 (356)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-31 5.1E-36 222.6 23.2 240 11-282 6-271 (450)
116 3mkq_A Coatomer beta'-subunit; 100.0 8.6E-32 3E-36 239.7 21.3 246 2-282 49-302 (814)
117 3dw8_B Serine/threonine-protei 100.0 4.7E-31 1.6E-35 219.4 23.8 259 2-281 75-445 (447)
118 1yfq_A Cell cycle arrest prote 100.0 8.2E-31 2.8E-35 210.4 20.1 236 3-265 51-313 (342)
119 3mmy_A MRNA export factor; mRN 100.0 1.9E-30 6.5E-35 210.1 19.6 195 2-261 80-333 (368)
120 1l0q_A Surface layer protein; 100.0 3.4E-28 1.2E-32 198.8 27.1 225 3-309 27-253 (391)
121 3bws_A Protein LP49; two-domai 100.0 1.5E-28 5.2E-33 203.5 25.2 232 3-309 164-410 (433)
122 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-28 3.8E-33 198.1 21.5 197 6-281 123-332 (343)
123 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-27 4E-32 196.6 27.8 226 2-309 172-407 (415)
124 3bws_A Protein LP49; two-domai 100.0 9.7E-28 3.3E-32 198.7 23.1 221 12-309 125-354 (433)
125 1l0q_A Surface layer protein; 100.0 2.7E-26 9.1E-31 187.5 25.5 206 22-309 3-209 (391)
126 2w18_A PALB2, fancn, partner a 100.0 2.1E-27 7.2E-32 184.3 16.9 157 5-215 175-355 (356)
127 3vu4_A KMHSV2; beta-propeller 99.9 3.9E-26 1.3E-30 184.0 17.8 204 78-309 6-250 (355)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.8E-25 1.3E-29 181.8 21.5 257 11-309 64-363 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 2E-25 6.9E-30 184.0 18.9 228 11-282 38-278 (434)
130 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-24 4.3E-29 179.3 22.6 169 11-218 94-279 (434)
131 2ojh_A Uncharacterized protein 99.9 3.1E-25 1.1E-29 174.0 18.2 234 3-309 36-281 (297)
132 3vgz_A Uncharacterized protein 99.9 2E-23 6.7E-28 168.1 25.0 258 11-309 42-323 (353)
133 1nir_A Nitrite reductase; hemo 99.9 2.6E-23 8.9E-28 175.9 23.5 225 12-309 181-430 (543)
134 3u4y_A Uncharacterized protein 99.9 2.2E-22 7.6E-27 160.6 24.8 246 5-282 37-304 (331)
135 1ri6_A Putative isomerase YBHE 99.9 8.1E-23 2.8E-27 163.8 22.2 242 7-309 36-286 (343)
136 2ecf_A Dipeptidyl peptidase IV 99.9 9.2E-23 3.1E-27 179.9 21.3 257 11-309 38-389 (741)
137 3u4y_A Uncharacterized protein 99.9 1.4E-21 4.8E-26 156.0 23.7 220 15-309 3-230 (331)
138 3hfq_A Uncharacterized protein 99.9 8E-22 2.7E-26 158.4 21.2 232 11-309 41-295 (347)
139 2ojh_A Uncharacterized protein 99.9 8.9E-22 3.1E-26 154.3 20.7 187 86-309 36-226 (297)
140 3o4h_A Acylamino-acid-releasin 99.9 1.5E-22 5E-27 173.8 17.0 236 4-280 16-274 (582)
141 1xfd_A DIP, dipeptidyl aminope 99.9 6.4E-23 2.2E-27 180.4 13.7 207 11-281 18-288 (723)
142 3scy_A Hypothetical bacterial 99.9 5.9E-21 2E-25 154.3 24.1 265 11-308 51-360 (361)
143 1nir_A Nitrite reductase; hemo 99.9 2.9E-21 1E-25 163.4 22.4 203 16-296 144-363 (543)
144 3hfq_A Uncharacterized protein 99.9 1.4E-20 4.7E-25 151.3 24.3 222 6-281 83-316 (347)
145 2z3z_A Dipeptidyl aminopeptida 99.9 2.2E-21 7.4E-26 170.3 20.9 258 11-309 83-410 (706)
146 2ecf_A Dipeptidyl peptidase IV 99.9 2E-21 6.8E-26 171.4 20.1 244 2-309 145-434 (741)
147 1xfd_A DIP, dipeptidyl aminope 99.9 4.2E-21 1.4E-25 168.9 21.7 273 3-309 52-419 (723)
148 1ri6_A Putative isomerase YBHE 99.9 3.7E-20 1.3E-24 148.3 23.0 209 11-281 85-307 (343)
149 1k32_A Tricorn protease; prote 99.9 5.3E-21 1.8E-25 174.3 18.6 264 3-309 198-481 (1045)
150 3vgz_A Uncharacterized protein 99.9 4.8E-20 1.6E-24 148.3 21.5 225 12-264 91-334 (353)
151 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-20 3.6E-25 151.8 15.9 237 14-296 4-333 (349)
152 2z3z_A Dipeptidyl aminopeptida 99.9 6.1E-20 2.1E-24 161.1 21.6 249 4-282 116-435 (706)
153 1k32_A Tricorn protease; prote 99.9 4.7E-20 1.6E-24 168.1 20.8 224 3-263 240-491 (1045)
154 1pby_B Quinohemoprotein amine 99.8 6.3E-20 2.1E-24 146.6 17.6 228 22-296 2-318 (337)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.5E-18 5.1E-23 140.3 24.2 245 11-281 41-340 (365)
156 1z68_A Fibroblast activation p 99.8 2.8E-20 9.7E-25 163.5 13.6 223 14-309 20-321 (719)
157 3fvz_A Peptidyl-glycine alpha- 99.8 1.3E-16 4.4E-21 127.1 28.8 251 11-309 25-301 (329)
158 1z68_A Fibroblast activation p 99.8 4.9E-19 1.7E-23 155.7 16.0 239 12-281 62-390 (719)
159 4a5s_A Dipeptidyl peptidase 4 99.8 3E-18 1E-22 151.0 18.6 218 11-281 18-293 (740)
160 3o4h_A Acylamino-acid-releasin 99.8 1.3E-18 4.4E-23 149.4 15.4 233 3-281 58-314 (582)
161 1q7f_A NHL, brain tumor CG1071 99.8 2.9E-16 1E-20 122.5 25.6 235 6-281 27-279 (286)
162 3pe7_A Oligogalacturonate lyas 99.8 2.8E-17 9.5E-22 133.9 19.1 210 2-282 24-273 (388)
163 3azo_A Aminopeptidase; POP fam 99.8 4.6E-17 1.6E-21 141.8 19.5 267 3-305 18-341 (662)
164 1pby_B Quinohemoprotein amine 99.8 2.1E-17 7.2E-22 131.9 15.7 138 68-218 8-164 (337)
165 3pe7_A Oligogalacturonate lyas 99.7 3.8E-17 1.3E-21 133.1 16.0 241 5-281 77-381 (388)
166 3fvz_A Peptidyl-glycine alpha- 99.7 2.8E-15 9.4E-20 119.4 26.1 205 11-281 92-321 (329)
167 2dg1_A DRP35, lactonase; beta 99.7 4.7E-16 1.6E-20 124.1 21.5 211 4-281 40-262 (333)
168 2xdw_A Prolyl endopeptidase; a 99.7 9E-16 3.1E-20 134.6 24.0 232 6-309 122-389 (710)
169 2oiz_A Aromatic amine dehydrog 99.7 2.1E-16 7.3E-21 127.2 18.1 255 14-309 54-357 (361)
170 3scy_A Hypothetical bacterial 99.7 1.8E-15 6E-20 122.1 23.3 200 90-309 48-268 (361)
171 3e5z_A Putative gluconolactona 99.7 1.5E-15 5.1E-20 119.1 21.7 219 3-307 22-263 (296)
172 1rwi_B Serine/threonine-protei 99.7 2.4E-14 8.1E-19 110.6 26.7 233 12-281 26-263 (270)
173 2bkl_A Prolyl endopeptidase; m 99.7 2.2E-15 7.6E-20 131.8 20.8 202 6-281 118-348 (695)
174 4a5s_A Dipeptidyl peptidase 4 99.7 2E-15 6.8E-20 133.0 20.0 206 13-281 65-352 (740)
175 1jmx_B Amine dehydrogenase; ox 99.7 7.1E-16 2.4E-20 123.6 15.8 140 68-218 18-176 (349)
176 3azo_A Aminopeptidase; POP fam 99.7 3.4E-15 1.1E-19 130.1 21.1 195 7-262 128-353 (662)
177 2gop_A Trilobed protease; beta 99.7 7E-15 2.4E-19 117.9 20.5 205 11-309 60-311 (347)
178 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.1E-14 3.9E-19 117.6 21.4 161 92-281 40-223 (365)
179 1xip_A Nucleoporin NUP159; bet 99.7 9E-15 3.1E-19 117.1 18.6 194 11-263 39-233 (388)
180 3c5m_A Oligogalacturonate lyas 99.7 3.7E-15 1.3E-19 121.6 16.4 230 14-281 85-381 (396)
181 3c5m_A Oligogalacturonate lyas 99.6 1.5E-15 5.3E-20 123.9 12.0 201 12-282 38-273 (396)
182 2dg1_A DRP35, lactonase; beta 99.6 2.5E-14 8.5E-19 114.0 17.9 194 11-281 7-212 (333)
183 3e5z_A Putative gluconolactona 99.6 3.7E-13 1.2E-17 105.5 22.9 190 4-262 64-275 (296)
184 2z2n_A Virginiamycin B lyase; 99.6 3.4E-12 1.2E-16 99.9 26.5 237 4-281 10-254 (299)
185 3g4e_A Regucalcin; six bladed 99.6 3.9E-13 1.3E-17 105.3 20.9 222 12-308 15-249 (297)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5E-13 1.7E-17 105.5 21.2 226 11-309 19-277 (314)
187 3no2_A Uncharacterized protein 99.6 4.7E-13 1.6E-17 103.4 20.4 182 20-281 4-194 (276)
188 2oiz_A Aromatic amine dehydrog 99.6 6.2E-13 2.1E-17 107.0 19.3 216 12-256 110-360 (361)
189 3dsm_A Uncharacterized protein 99.5 1.7E-12 5.8E-17 103.1 20.2 205 11-281 85-301 (328)
190 2xdw_A Prolyl endopeptidase; a 99.5 3.4E-12 1.1E-16 112.1 23.9 205 12-282 173-414 (710)
191 1qks_A Cytochrome CD1 nitrite 99.5 7.9E-12 2.7E-16 105.9 25.1 207 11-282 198-421 (567)
192 1q7f_A NHL, brain tumor CG1071 99.5 3.8E-12 1.3E-16 99.1 21.4 152 11-217 122-280 (286)
193 1qks_A Cytochrome CD1 nitrite 99.5 5.5E-12 1.9E-16 106.8 23.7 191 19-282 165-373 (567)
194 1yr2_A Prolyl oligopeptidase; 99.5 2.6E-12 8.8E-17 113.3 22.5 243 11-282 164-441 (741)
195 1xip_A Nucleoporin NUP159; bet 99.5 1.9E-12 6.6E-17 103.6 19.4 130 12-202 90-230 (388)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.8E-11 6.1E-16 96.6 24.2 203 7-282 69-299 (314)
197 3hrp_A Uncharacterized protein 99.5 3.7E-11 1.3E-15 98.2 26.4 248 11-280 132-408 (409)
198 3dsm_A Uncharacterized protein 99.5 1.3E-11 4.5E-16 98.0 22.6 192 11-282 45-253 (328)
199 3iuj_A Prolyl endopeptidase; h 99.5 3.9E-12 1.3E-16 111.2 20.6 205 6-281 126-358 (693)
200 2gop_A Trilobed protease; beta 99.5 6.4E-12 2.2E-16 100.6 19.6 142 93-281 172-330 (347)
201 1rwi_B Serine/threonine-protei 99.5 1.9E-11 6.5E-16 94.2 21.2 156 92-282 67-222 (270)
202 2ghs_A AGR_C_1268P; regucalcin 99.5 3.5E-11 1.2E-15 95.5 23.1 216 12-308 51-279 (326)
203 2qc5_A Streptogramin B lactona 99.5 6.4E-11 2.2E-15 92.6 24.1 232 11-281 21-259 (300)
204 2bkl_A Prolyl endopeptidase; m 99.5 5.3E-12 1.8E-16 110.5 19.5 202 13-282 171-397 (695)
205 2z2n_A Virginiamycin B lyase; 99.5 5.2E-10 1.8E-14 87.4 28.7 230 11-281 58-294 (299)
206 3no2_A Uncharacterized protein 99.4 2E-10 7E-15 88.6 23.5 178 11-260 38-229 (276)
207 3dr2_A Exported gluconolactona 99.4 8.1E-11 2.8E-15 92.5 21.0 194 11-281 46-266 (305)
208 2mad_H Methylamine dehydrogena 99.4 5.4E-10 1.9E-14 90.1 24.9 240 14-294 70-356 (373)
209 3g4e_A Regucalcin; six bladed 99.4 3.3E-10 1.1E-14 88.6 22.5 192 11-264 55-262 (297)
210 2qc5_A Streptogramin B lactona 99.4 2.2E-09 7.6E-14 83.8 26.0 219 11-259 63-287 (300)
211 2qe8_A Uncharacterized protein 99.3 2.5E-10 8.6E-15 91.2 20.2 213 11-281 18-277 (343)
212 2iwa_A Glutamine cyclotransfer 99.3 4.2E-09 1.4E-13 79.8 23.2 196 12-283 23-238 (266)
213 1yr2_A Prolyl oligopeptidase; 99.3 4.4E-10 1.5E-14 99.2 20.4 167 90-282 161-350 (741)
214 3sjl_D Methylamine dehydrogena 99.3 1.5E-10 5.3E-15 92.4 15.1 243 14-296 82-371 (386)
215 2ghs_A AGR_C_1268P; regucalcin 99.3 4.4E-09 1.5E-13 83.4 23.0 191 11-264 91-292 (326)
216 1npe_A Nidogen, entactin; glyc 99.3 3E-08 1E-12 76.2 26.6 204 12-296 38-246 (267)
217 3c75_H MADH, methylamine dehyd 99.2 3.8E-10 1.3E-14 91.7 15.0 242 14-295 122-409 (426)
218 3dr2_A Exported gluconolactona 99.2 3.9E-09 1.3E-13 82.8 20.4 183 11-263 87-296 (305)
219 2mad_H Methylamine dehydrogena 99.2 1.2E-08 4E-13 82.3 23.3 105 96-215 70-194 (373)
220 2qe8_A Uncharacterized protein 99.2 3.2E-09 1.1E-13 84.8 19.5 202 6-260 64-307 (343)
221 2hz6_A Endoplasmic reticulum t 99.2 2.3E-12 7.9E-17 103.9 0.6 140 20-217 8-149 (369)
222 3hrp_A Uncharacterized protein 99.2 5.5E-09 1.9E-13 85.4 20.1 157 92-281 131-297 (409)
223 3nol_A Glutamine cyclotransfer 99.2 1.4E-08 4.7E-13 76.1 20.0 191 12-263 45-244 (262)
224 2ece_A 462AA long hypothetical 99.1 1.4E-08 4.8E-13 81.9 20.3 169 93-282 139-352 (462)
225 1npe_A Nidogen, entactin; glyc 99.1 2.1E-07 7.2E-12 71.4 25.4 160 92-281 36-197 (267)
226 1mda_H Methylamine dehydrogena 99.1 6E-10 2.1E-14 89.0 11.1 247 14-307 69-364 (368)
227 3nok_A Glutaminyl cyclase; bet 99.1 7.1E-08 2.4E-12 72.2 21.0 189 12-263 57-254 (268)
228 3iuj_A Prolyl endopeptidase; h 99.1 3.1E-08 1E-12 86.7 22.0 202 13-281 178-404 (693)
229 2ece_A 462AA long hypothetical 99.1 2.8E-08 9.7E-13 80.2 19.3 149 95-263 191-400 (462)
230 3mbr_X Glutamine cyclotransfer 99.1 3E-07 1E-11 68.3 22.5 195 11-263 22-223 (243)
231 3c75_H MADH, methylamine dehyd 99.0 6.8E-08 2.3E-12 78.5 19.6 118 83-215 111-246 (426)
232 3sjl_D Methylamine dehydrogena 99.0 8.4E-08 2.9E-12 76.7 19.3 151 15-220 38-211 (386)
233 1kb0_A Quinohemoprotein alcoho 99.0 2.2E-08 7.5E-13 87.1 15.7 153 20-182 127-354 (677)
234 1yiq_A Quinohemoprotein alcoho 98.9 1.2E-07 4.2E-12 82.6 19.7 149 21-179 121-343 (689)
235 3v64_C Agrin; beta propeller, 98.9 3E-06 1E-10 67.6 25.9 116 93-217 117-234 (349)
236 3v65_B Low-density lipoprotein 98.9 1.5E-06 5.3E-11 70.3 24.0 155 93-280 160-316 (386)
237 2p4o_A Hypothetical protein; p 98.9 3E-06 1E-10 66.4 24.5 197 11-281 33-241 (306)
238 1ijq_A LDL receptor, low-densi 98.9 7E-06 2.4E-10 64.6 26.1 203 12-281 32-237 (316)
239 3v64_C Agrin; beta propeller, 98.9 1.1E-05 3.9E-10 64.3 26.9 160 92-281 73-233 (349)
240 3p5b_L Low density lipoprotein 98.8 2.1E-05 7.2E-10 64.0 28.7 160 92-281 159-319 (400)
241 3v65_B Low-density lipoprotein 98.8 5.5E-06 1.9E-10 67.1 24.9 160 92-281 116-276 (386)
242 1fwx_A Nitrous oxide reductase 98.8 5.4E-07 1.9E-11 75.4 18.5 168 92-281 134-360 (595)
243 1mda_H Methylamine dehydrogena 98.8 3.9E-07 1.3E-11 72.8 16.4 187 13-217 127-346 (368)
244 3sov_A LRP-6, low-density lipo 98.8 2.4E-05 8.1E-10 61.5 25.1 115 93-217 80-197 (318)
245 3hxj_A Pyrrolo-quinoline quino 98.7 2.6E-07 8.9E-12 73.1 13.8 179 11-215 61-242 (330)
246 3hxj_A Pyrrolo-quinoline quino 98.7 8.5E-07 2.9E-11 70.1 16.6 213 21-281 107-323 (330)
247 1ijq_A LDL receptor, low-densi 98.7 4.1E-05 1.4E-09 60.2 26.4 161 92-281 30-194 (316)
248 2xe4_A Oligopeptidase B; hydro 98.7 4.1E-06 1.4E-10 74.0 21.8 158 11-216 175-353 (751)
249 2hz6_A Endoplasmic reticulum t 98.7 8.2E-10 2.8E-14 89.0 -1.5 137 105-281 10-148 (369)
250 2iwa_A Glutamine cyclotransfer 98.7 2.9E-06 1E-10 64.3 17.9 153 94-282 23-181 (266)
251 2fp8_A Strictosidine synthase; 98.7 1.2E-05 4.2E-10 63.4 22.1 229 13-281 22-312 (322)
252 1yiq_A Quinohemoprotein alcoho 98.7 3.7E-06 1.3E-10 73.4 20.3 82 158-262 454-536 (689)
253 3nol_A Glutamine cyclotransfer 98.7 2.8E-06 9.6E-11 63.7 16.8 149 94-281 45-200 (262)
254 1kb0_A Quinohemoprotein alcoho 98.7 4.7E-06 1.6E-10 72.6 20.7 156 101-282 322-567 (677)
255 1fwx_A Nitrous oxide reductase 98.7 3.4E-06 1.2E-10 70.7 18.8 164 101-282 99-308 (595)
256 3m0c_C LDL receptor, low-densi 98.6 3.8E-05 1.3E-09 67.7 25.6 117 92-217 471-589 (791)
257 3q7m_A Lipoprotein YFGL, BAMB; 98.6 3.2E-06 1.1E-10 68.3 17.3 177 20-217 102-296 (376)
258 1kv9_A Type II quinohemoprotei 98.6 1.7E-06 5.9E-11 75.2 16.5 149 21-179 117-338 (668)
259 3nok_A Glutaminyl cyclase; bet 98.6 6.6E-06 2.3E-10 61.7 16.7 150 94-281 57-209 (268)
260 3q7m_A Lipoprotein YFGL, BAMB; 98.6 6.2E-06 2.1E-10 66.6 18.2 176 21-217 143-337 (376)
261 1n7d_A LDL receptor, low-densi 98.6 9.2E-07 3.2E-11 77.2 13.3 157 94-281 455-613 (699)
262 3p5b_L Low density lipoprotein 98.6 0.00018 6E-09 58.6 26.3 164 90-281 110-276 (400)
263 3mbr_X Glutamine cyclotransfer 98.6 2.6E-05 8.9E-10 57.9 18.8 110 92-218 21-134 (243)
264 3sov_A LRP-6, low-density lipo 98.5 0.0002 6.9E-09 56.2 23.8 160 93-281 36-196 (318)
265 3qqz_A Putative uncharacterize 98.4 0.00024 8.1E-09 53.5 25.7 197 3-259 21-239 (255)
266 3qqz_A Putative uncharacterize 98.4 0.00034 1.2E-08 52.7 21.3 172 86-281 21-203 (255)
267 3m0c_C LDL receptor, low-densi 98.4 0.00077 2.6E-08 59.6 26.1 163 91-281 423-588 (791)
268 3s94_A LRP-6, low-density lipo 98.3 0.00047 1.6E-08 59.3 24.2 117 92-217 84-202 (619)
269 4a0p_A LRP6, LRP-6, low-densit 98.3 0.00091 3.1E-08 57.7 26.0 157 12-217 39-197 (628)
270 3tc9_A Hypothetical hydrolase; 98.3 0.0001 3.4E-09 60.6 18.7 157 93-281 138-300 (430)
271 3tc9_A Hypothetical hydrolase; 98.3 6.4E-05 2.2E-09 61.7 17.4 156 13-217 140-301 (430)
272 2ad6_A Methanol dehydrogenase 98.3 3.5E-05 1.2E-09 65.7 15.7 59 115-182 273-343 (571)
273 2p9w_A MAL S 1 allergenic prot 98.3 9.3E-05 3.2E-09 57.5 16.5 115 93-217 64-215 (334)
274 1n7d_A LDL receptor, low-densi 98.3 1.4E-05 4.9E-10 69.7 13.2 161 92-281 406-570 (699)
275 3amr_A 3-phytase; beta-propell 98.2 0.00092 3.1E-08 52.5 22.1 149 113-281 98-262 (355)
276 2p9w_A MAL S 1 allergenic prot 98.2 0.00034 1.2E-08 54.4 18.7 163 90-282 11-215 (334)
277 2fp8_A Strictosidine synthase; 98.2 0.00026 8.9E-09 55.7 18.0 114 93-217 186-313 (322)
278 1w6s_A Methanol dehydrogenase 98.2 9.6E-05 3.3E-09 63.2 15.8 149 24-182 124-350 (599)
279 4a2l_A BT_4663, two-component 98.1 0.0043 1.5E-07 55.4 27.2 203 10-281 310-525 (795)
280 2p4o_A Hypothetical protein; p 98.1 0.0017 5.8E-08 50.6 22.5 146 95-263 120-277 (306)
281 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0038 1.3E-07 53.9 26.7 159 92-281 37-196 (628)
282 1flg_A Protein (quinoprotein e 98.1 0.00025 8.6E-09 60.6 17.0 60 114-182 291-363 (582)
283 1kv9_A Type II quinohemoprotei 98.1 0.0004 1.4E-08 60.5 18.4 52 158-217 437-488 (668)
284 3kya_A Putative phosphatase; s 98.0 0.00066 2.2E-08 56.2 17.8 174 93-281 140-340 (496)
285 2xe4_A Oligopeptidase B; hydro 98.0 0.00097 3.3E-08 59.0 20.1 116 93-215 272-396 (751)
286 2ad6_A Methanol dehydrogenase 98.0 0.0011 3.6E-08 56.7 19.4 52 158-217 443-494 (571)
287 4hw6_A Hypothetical protein, I 98.0 0.004 1.4E-07 51.1 25.1 173 93-281 229-432 (433)
288 1flg_A Protein (quinoprotein e 98.0 0.0019 6.3E-08 55.3 20.0 82 158-262 465-547 (582)
289 4a2l_A BT_4663, two-component 98.0 0.0089 3E-07 53.3 25.9 203 10-281 357-570 (795)
290 4hw6_A Hypothetical protein, I 98.0 0.0014 4.6E-08 53.9 18.3 158 93-281 140-303 (433)
291 1k3i_A Galactose oxidase precu 97.9 0.0012 4.3E-08 57.4 17.4 28 14-41 247-275 (656)
292 3kya_A Putative phosphatase; s 97.8 0.0015 5.2E-08 54.1 16.3 124 92-217 186-341 (496)
293 3s94_A LRP-6, low-density lipo 97.8 0.016 5.4E-07 50.0 27.0 117 92-217 392-510 (619)
294 1w6s_A Methanol dehydrogenase 97.7 0.008 2.7E-07 51.5 20.0 52 158-217 452-503 (599)
295 3v9f_A Two-component system se 97.7 0.018 6.3E-07 51.2 22.8 197 10-281 363-567 (781)
296 3sre_A PON1, serum paraoxonase 97.6 0.015 5.2E-07 46.1 19.7 160 93-281 51-251 (355)
297 3amr_A 3-phytase; beta-propell 97.6 0.0082 2.8E-07 47.2 16.7 123 92-217 128-263 (355)
298 1k3i_A Galactose oxidase precu 97.6 0.0022 7.5E-08 55.8 14.7 105 95-206 402-530 (656)
299 3sre_A PON1, serum paraoxonase 97.6 0.019 6.7E-07 45.5 22.0 144 93-259 113-282 (355)
300 2xn4_A Kelch-like protein 2; s 97.5 0.022 7.7E-07 44.1 17.8 103 105-217 110-229 (302)
301 3v9f_A Two-component system se 97.5 0.055 1.9E-06 48.2 24.8 142 92-260 363-511 (781)
302 3ii7_A Kelch-like protein 7; p 97.4 0.024 8.3E-07 44.0 17.4 150 105-282 103-272 (306)
303 1zgk_A Kelch-like ECH-associat 97.3 0.022 7.5E-07 44.3 16.5 150 105-282 123-287 (308)
304 2xzh_A Clathrin heavy chain 1; 97.3 0.033 1.1E-06 43.2 20.0 188 71-282 87-290 (365)
305 2xbg_A YCF48-like protein; pho 97.3 0.039 1.3E-06 43.4 21.8 108 90-210 161-272 (327)
306 2vpj_A Kelch-like protein 12; 97.2 0.044 1.5E-06 42.4 19.5 103 105-217 114-231 (301)
307 2ism_A Putative oxidoreductase 97.1 0.062 2.1E-06 42.7 17.1 107 92-205 31-153 (352)
308 3pbp_A Nucleoporin NUP82; beta 96.9 0.12 4.2E-06 41.7 17.5 113 93-212 67-207 (452)
309 2vpj_A Kelch-like protein 12; 96.8 0.11 3.7E-06 40.1 18.9 103 105-217 64-184 (301)
310 1bpo_A Protein (clathrin); cla 96.8 0.15 5.2E-06 41.4 21.5 189 70-282 85-289 (494)
311 2xn4_A Kelch-like protein 2; s 96.8 0.12 4.1E-06 39.9 17.2 103 105-217 63-182 (302)
312 3pbp_A Nucleoporin NUP82; beta 96.8 0.16 5.6E-06 41.0 19.3 150 100-260 29-196 (452)
313 1zgk_A Kelch-like ECH-associat 96.7 0.15 5.1E-06 39.6 16.9 103 105-217 72-193 (308)
314 1tl2_A L10, protein (tachylect 96.6 0.061 2.1E-06 39.2 11.7 106 93-211 42-157 (236)
315 3ii7_A Kelch-like protein 7; p 96.6 0.18 6.1E-06 39.0 17.4 103 105-217 57-178 (306)
316 2xzh_A Clathrin heavy chain 1; 96.5 0.2 6.8E-06 39.0 14.8 139 112-281 47-188 (365)
317 3a9g_A Putative uncharacterize 96.5 0.24 8.2E-06 39.4 17.5 108 92-205 29-153 (354)
318 2ism_A Putative oxidoreductase 96.4 0.25 8.5E-06 39.2 22.2 106 12-156 33-153 (352)
319 1xi4_A Clathrin heavy chain; a 96.3 0.45 1.5E-05 44.8 18.1 234 29-295 46-296 (1630)
320 2g8s_A Glucose/sorbosone dehyd 96.2 0.25 8.6E-06 39.2 14.6 75 137-216 18-106 (353)
321 2uvk_A YJHT; unknown function, 96.2 0.15 5.3E-06 40.4 13.4 51 114-166 168-224 (357)
322 1tl2_A L10, protein (tachylect 96.1 0.25 8.5E-06 36.1 14.3 111 94-217 90-208 (236)
323 1cru_A Protein (soluble quinop 96.1 0.5 1.7E-05 39.0 18.9 28 12-39 29-56 (454)
324 2xbg_A YCF48-like protein; pho 96.0 0.4 1.4E-05 37.5 24.5 108 92-214 122-231 (327)
325 3a9g_A Putative uncharacterize 95.8 0.54 1.8E-05 37.3 21.5 106 12-156 31-153 (354)
326 4asc_A Kelch repeat and BTB do 95.6 0.59 2E-05 36.2 17.1 103 105-217 100-221 (315)
327 4asc_A Kelch repeat and BTB do 95.5 0.63 2.1E-05 36.1 14.7 92 116-217 69-174 (315)
328 2woz_A Kelch repeat and BTB do 95.4 0.7 2.4E-05 35.9 17.6 103 105-217 111-231 (318)
329 2zwa_A Leucine carboxyl methyl 95.4 1.3 4.4E-05 38.9 16.7 109 102-217 451-577 (695)
330 3das_A Putative oxidoreductase 95.3 0.8 2.7E-05 36.2 19.3 117 87-205 27-158 (347)
331 2g8s_A Glucose/sorbosone dehyd 95.2 0.91 3.1E-05 36.0 25.0 28 12-39 20-47 (353)
332 1cru_A Protein (soluble quinop 95.1 1.1 3.9E-05 36.9 21.3 111 92-205 27-162 (454)
333 3ei3_A DNA damage-binding prot 94.7 1.4 4.7E-05 41.2 15.4 157 92-282 829-999 (1158)
334 3das_A Putative oxidoreductase 94.4 1.4 4.9E-05 34.7 24.7 110 12-156 34-158 (347)
335 2woz_A Kelch repeat and BTB do 94.1 1.6 5.5E-05 33.8 14.9 103 105-217 58-184 (318)
336 1xi4_A Clathrin heavy chain; a 93.7 1.2 4E-05 42.3 12.5 142 112-282 46-188 (1630)
337 2zwa_A Leucine carboxyl methyl 93.6 1.8 6.1E-05 38.0 13.5 114 102-217 500-635 (695)
338 3ei3_A DNA damage-binding prot 93.4 4.8 0.00017 37.7 16.3 113 92-216 514-635 (1158)
339 3s25_A Hypothetical 7-bladed b 93.3 2.2 7.5E-05 33.0 14.6 101 98-217 59-176 (302)
340 3sbq_A Nitrous-oxide reductase 92.3 0.36 1.2E-05 40.5 6.7 80 136-218 322-409 (638)
341 3sbq_A Nitrous-oxide reductase 90.9 2 6.7E-05 36.3 9.5 76 92-168 323-408 (638)
342 2wg3_C Hedgehog-interacting pr 89.9 7.5 0.00026 32.1 13.6 64 137-204 14-90 (463)
343 3b7f_A Glycosyl hydrolase, BNR 88.0 9 0.00031 30.7 15.2 72 92-163 115-203 (394)
344 3b7f_A Glycosyl hydrolase, BNR 86.9 10 0.00036 30.3 17.1 65 92-159 177-254 (394)
345 2wg3_C Hedgehog-interacting pr 85.7 14 0.00048 30.5 13.9 27 13-39 17-44 (463)
346 1bpo_A Protein (clathrin); cla 85.5 14 0.00048 30.4 23.1 236 14-281 70-330 (494)
347 4gq2_M Nucleoporin NUP120; bet 85.2 22 0.00077 32.5 13.5 31 187-218 237-267 (950)
348 2uvk_A YJHT; unknown function, 84.3 13 0.00045 29.1 14.5 51 105-158 67-128 (357)
349 3no0_A DNA gyrase subunit A; D 84.0 12 0.00041 28.4 21.9 122 91-217 67-196 (276)
350 2be1_A Serine/threonine-protei 80.8 3.5 0.00012 32.4 5.9 71 105-182 57-138 (339)
351 3s25_A Hypothetical 7-bladed b 80.7 17 0.0006 27.9 17.4 102 98-217 151-255 (302)
352 2be1_A Serine/threonine-protei 78.7 4.3 0.00015 31.9 5.7 103 105-217 11-130 (339)
353 3qhy_B Beta-lactamase inhibito 77.4 21 0.00073 27.1 18.5 167 70-282 80-246 (282)
354 4gq2_M Nucleoporin NUP120; bet 75.1 51 0.0017 30.3 14.9 32 93-125 237-268 (950)
355 1sqj_A OXG-RCBH, oligoxylogluc 71.0 33 0.0011 30.6 10.0 63 91-156 14-83 (789)
356 3ott_A Two-component system se 66.8 68 0.0023 28.3 24.3 146 93-281 104-259 (758)
357 4fhn_B Nucleoporin NUP120; pro 65.0 22 0.00076 33.3 8.0 30 245-282 239-268 (1139)
358 3zwu_A Alkaline phosphatase PH 63.8 34 0.0012 29.3 8.2 59 138-203 477-548 (592)
359 3f7f_A Nucleoporin NUP120; nuc 61.9 11 0.00038 33.0 4.9 33 11-45 223-255 (729)
360 4a9v_A PHOX; hydrolase, beta-p 61.3 51 0.0017 28.2 8.6 62 138-206 477-551 (592)
361 3zwu_A Alkaline phosphatase PH 60.7 52 0.0018 28.2 8.8 58 94-155 478-548 (592)
362 2cn3_A Xyloglucanase, beta-1,4 60.6 90 0.0031 27.6 10.8 62 92-156 23-91 (737)
363 4fhn_B Nucleoporin NUP120; pro 55.7 12 0.0004 35.1 4.5 38 138-182 239-276 (1139)
364 3f7f_A Nucleoporin NUP120; nuc 53.7 20 0.00069 31.4 5.2 36 138-182 223-258 (729)
365 1sqj_A OXG-RCBH, oligoxylogluc 51.6 1.3E+02 0.0046 26.8 17.9 28 10-37 15-43 (789)
366 3qhy_B Beta-lactamase inhibito 50.9 78 0.0027 23.9 15.1 179 11-217 64-246 (282)
367 3q6k_A 43.2 kDa salivary prote 48.2 1E+02 0.0036 24.6 20.6 153 91-260 151-340 (381)
368 2cn3_A Xyloglucanase, beta-1,4 45.5 1.6E+02 0.0055 26.0 16.1 27 11-37 24-51 (737)
369 3ott_A Two-component system se 45.4 1.6E+02 0.0055 26.0 23.9 105 93-214 192-304 (758)
370 4a9v_A PHOX; hydrolase, beta-p 43.7 1.6E+02 0.0053 25.3 9.4 59 93-155 477-548 (592)
371 3nvq_A Semaphorin-7A; beta-pro 29.4 2.6E+02 0.0089 24.0 8.0 58 105-163 381-444 (590)
372 3uc1_A DNA gyrase subunit A; D 28.5 2.1E+02 0.0071 22.3 20.2 123 91-217 94-228 (327)
373 1q47_A Semaphorin 3A; beta pro 27.0 2.7E+02 0.0092 23.3 7.7 62 150-212 422-487 (495)
374 1q47_A Semaphorin 3A; beta pro 26.5 2.7E+02 0.0092 23.3 7.6 70 93-163 405-487 (495)
375 3q6k_A 43.2 kDa salivary prote 26.4 2.5E+02 0.0085 22.5 18.1 146 115-282 124-306 (381)
376 4gz8_A Semaphorin-3A; multi-do 26.0 2.7E+02 0.0093 24.4 7.7 58 105-163 430-495 (667)
377 2zux_A YESW protein; beta-prop 24.8 3.3E+02 0.011 23.3 15.5 26 90-115 177-202 (591)
378 1ukf_A Avirulence protein AVRP 23.4 55 0.0019 22.9 2.5 36 90-125 117-152 (188)
379 3nvq_A Semaphorin-7A; beta-pro 21.7 3.9E+02 0.013 23.0 8.1 62 150-212 381-444 (590)
380 3gw6_A Endo-N-acetylneuraminid 21.5 84 0.0029 23.6 3.2 28 252-281 43-71 (275)
381 3a0f_A Xyloglucanase; beta-pro 20.8 4.4E+02 0.015 23.4 14.8 64 90-156 19-94 (763)
382 1olz_A Semaphorin 4D; developm 20.7 4.3E+02 0.015 23.1 8.4 69 93-163 398-477 (663)
383 3al9_A Plexin-A2; beta-propell 20.4 2.7E+02 0.0091 23.6 6.5 71 92-163 400-476 (539)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-46 Score=297.17 Aligned_cols=267 Identities=21% Similarity=0.308 Sum_probs=219.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
++|++|.+ .|++++|+|++++|++|+.||+|++||++++........ ......... ...+..+..++.+++|+
T Consensus 7 ~~~~~h~~-~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 7 KTFSNRSD-RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIAR--KNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEEEECS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG--GTEEEEEETTSEEEEEE
T ss_pred EeecCCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCC--CCEEEEECCCCEEEEEE
Confidence 57899999 899999999999999999999999999987643322211 111111111 12234456788999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..+.+.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++++.. ....+.+|...|.+++|+|.++..|++|+.
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTE-EEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcc-hhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 99999999999999999999999998 8899999999999999987642 456778999999999999956789999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeec-cCCCCeeEEEEec--CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFE-GHSAAVLCVQWSP--DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
|+.|++||+++ ..+...+. .+...+..++|+| ++. ++++|+.|+.|++||++. ..
T Consensus 162 D~~v~iwd~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~---------------~~ 219 (304)
T 2ynn_A 162 DRTVKVWSLGQ------STPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQT---------------KS 219 (304)
T ss_dssp TSEEEEEETTC------SSCSEEEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETTT---------------TE
T ss_pred CCeEEEEECCC------CCccceeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCC---------------Cc
Confidence 99999999987 55554443 4567899999987 566 467999999999999987 45
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
++..+.+|...|.+++|+|+++. ++ +|+.||+|++||+. +.++++++..|.+.+++++|+|
T Consensus 220 ~~~~~~~h~~~v~~~~~~p~~~~-l~-------s~s~Dg~i~iWd~~------~~~~~~~~~~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 220 CVATLEGHMSNVSFAVFHPTLPI-II-------SGSEDGTLKIWNSS------TYKVEKTLNVGLERSWCIATHP 280 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSE-EE-------EEETTSCEEEEETT------TCCEEEEECCSSSSEEEEEECT
T ss_pred cceeeCCCCCCEEEEEECCCCCE-EE-------EEcCCCeEEEEECC------CCceeeeccCCCccEEEEEECC
Confidence 67788999999999999998875 44 44455999999998 6788888999999999999887
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-46 Score=305.14 Aligned_cols=265 Identities=20% Similarity=0.329 Sum_probs=227.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
..|.+|.+ +|++++|+|++++|++|+.||+|+|||+.++....... ........... ..+..+..++.+++|+
T Consensus 102 ~~l~gh~~-~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~--~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 102 YALSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG--KLLASCSADMTIKLWD 178 (410)
T ss_dssp CEEECCSS-CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS--SEEEEEETTSCCCEEE
T ss_pred EeecccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC--CEEEEEeCCCeEEEEe
Confidence 35789999 89999999999999999999999999998874433222 11111222222 2344456789999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..+.+.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++++. ....+.+|...|.+++++| ++.+|++|+.
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~ 254 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQ-DGTLIASCSN 254 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECT-TSSEEEEEET
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc--EEEEEeCCCccEEEEEECC-CCCEEEEEcC
Confidence 99999999999999999999999998 889999999999999999888 6788889999999999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecC--------------------CCcEEEEecCCCcEEEEeCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD--------------------KSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~~dg~i~iwd~~~ 217 (309)
|+.|++||+++ ++....+..|...|.+++|+|+ +. ++++|+.|+.|++||++.
T Consensus 255 D~~v~vwd~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 255 DQTVRVWVVAT------KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp TSCEEEEETTT------CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTT
T ss_pred CCeEEEEECCC------CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCC
Confidence 99999999998 8888999999999999999997 44 477999999999999987
Q ss_pred ccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc
Q 021657 218 VGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK 297 (309)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~ 297 (309)
..++..+.+|...|.+++|+|++.+++ +|+.||.|++||+. +++++.++.+
T Consensus 328 ---------------~~~~~~~~~h~~~v~~v~~~~~g~~l~--------s~s~D~~i~vwd~~------~~~~~~~~~~ 378 (410)
T 1vyh_C 328 ---------------GMCLMTLVGHDNWVRGVLFHSGGKFIL--------SCADDKTLRVWDYK------NKRCMKTLNA 378 (410)
T ss_dssp ---------------TEEEEEEECCSSCEEEEEECSSSSCEE--------EEETTTEEEEECCT------TSCCCEEEEC
T ss_pred ---------------CceEEEEECCCCcEEEEEEcCCCCEEE--------EEeCCCeEEEEECC------CCceEEEEcC
Confidence 456677889999999999999888765 45555999999998 6778889999
Q ss_pred ccceEEEeeeCC
Q 021657 298 FKAHVISCTSKP 309 (309)
Q Consensus 298 h~~~v~~~~~~P 309 (309)
|.+.|++++|+|
T Consensus 379 h~~~v~~l~~~~ 390 (410)
T 1vyh_C 379 HEHFVTSLDFHK 390 (410)
T ss_dssp CSSCEEEEEECS
T ss_pred CCCcEEEEEEcC
Confidence 999999999987
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-46 Score=297.06 Aligned_cols=267 Identities=17% Similarity=0.272 Sum_probs=221.8
Q ss_pred cccCCCCCcceEEEEECCC----CCEEEEecCCCcEEEEeCCcccccc----ccCCccccccCCCCceeecCCCCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPT----EPYVLSGGKDKSVVLWSIQDHITSS----ATDPATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~----~~~l~t~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
+.+++|.+ .|++++|+|+ +.+|+||+.|++|+||++....... ..................+..+..++.+
T Consensus 26 ~~~~~H~~-~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 26 KQEQAHDD-AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EETTSSSS-CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eecccCCC-cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 46789999 8999999985 5689999999999999987653211 1111111111111111233445678899
Q ss_pred ccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 74 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
++|+..+.+.+..+..|...+.+++|+|++ .+|++|+.||.|++||+++++ ....+..|...|.+++|+| ++++|+
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~--~~~~~~~~~~~v~~~~~sp-dg~~la 180 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSP-DGKYLA 180 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCS--EEEEEECSSSCEEEEEECT-TSSEEE
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCc--eeEEecCCCceEEEEEECC-CCCEEE
Confidence 999999999999999999999999999998 889999999999999999887 5677778889999999999 999999
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
+|+.||.|++||+++ ++.+..+.+|..+|++++|+|++++ |++|+.|+.|++||++. .
T Consensus 181 sg~~dg~i~iwd~~~------~~~~~~~~~h~~~v~~l~~spd~~~-l~s~s~dg~i~iwd~~~---------------~ 238 (321)
T 3ow8_A 181 SGAIDGIINIFDIAT------GKLLHTLEGHAMPIRSLTFSPDSQL-LVTASDDGYIKIYDVQH---------------A 238 (321)
T ss_dssp EEETTSCEEEEETTT------TEEEEEECCCSSCCCEEEECTTSCE-EEEECTTSCEEEEETTT---------------C
T ss_pred EEcCCCeEEEEECCC------CcEEEEEcccCCceeEEEEcCCCCE-EEEEcCCCeEEEEECCC---------------c
Confidence 999999999999998 8899999999999999999999995 67999999999999987 3
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.....+.+|...|.+++|+|++.+++ +|+.|++|++||+. +++++.++.+|.+.|.+++|+|
T Consensus 239 ~~~~~~~~h~~~v~~~~~sp~~~~l~--------s~s~D~~v~iwd~~------~~~~~~~~~~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 239 NLAGTLSGHASWVLNVAFCPDDTHFV--------SSSSDKSVKVWDVG------TRTCVHTFFDHQDQVWGVKYNG 300 (321)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEE--------EEETTSCEEEEETT------TTEEEEEECCCSSCEEEEEECT
T ss_pred ceeEEEcCCCCceEEEEECCCCCEEE--------EEeCCCcEEEEeCC------CCEEEEEEcCCCCcEEEEEECC
Confidence 45667889999999999999888655 44455999999999 7888899999999999999987
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.4e-44 Score=287.38 Aligned_cols=266 Identities=16% Similarity=0.261 Sum_probs=213.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
++|+||.+ .|++++|+|++++|++|+.||+|+|||+.++........ .......... ..+..+..++.+.+|+
T Consensus 49 ~~l~gH~~-~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 49 RTLRGHLA-KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG--NYVACGGLDNICSIYN 125 (340)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTS--SEEEEEETTCEEEEEE
T ss_pred eeecCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCC--CEEEEEeCCCeEEEEE
Confidence 46899999 899999999999999999999999999987643322211 1111111111 1223345577888888
Q ss_pred CCCcC----cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 78 GPSVG----PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 78 ~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
..+.. ....+.+|...|.++.|++++ .+++++.|+.|++||+++++ ....+.+|...|.+++|+| ++.+++
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~-~~~~l~ 200 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAP-DTRLFV 200 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCc--EEEEEcCCCCceEEEEECC-CCCEEE
Confidence 76643 445678899999999999986 48899999999999998887 6778889999999999999 999999
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
+|+.|+.|++||+++ +..+..+.+|...|++++|+|++.. |++|+.||.|++||++.....
T Consensus 201 sg~~d~~v~~wd~~~------~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~d~~v~iwd~~~~~~~------------ 261 (340)
T 1got_B 201 SGACDASAKLWDVRE------GMCRQTFTGHESDINAICFFPNGNA-FATGSDDATCRLFDLRADQEL------------ 261 (340)
T ss_dssp EEETTSCEEEEETTT------CSEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEE------------
T ss_pred EEeCCCcEEEEECCC------CeeEEEEcCCcCCEEEEEEcCCCCE-EEEEcCCCcEEEEECCCCcEE------------
Confidence 999999999999998 8889999999999999999999995 679999999999999872211
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.......+...|.+++|+|++.+++ +|+.||.|++||+. ..+++..+.+|.++|.+++|+|
T Consensus 262 -~~~~~~~~~~~v~~~~~s~~g~~l~--------~g~~d~~i~vwd~~------~~~~~~~~~~h~~~v~~~~~s~ 322 (340)
T 1got_B 262 -MTYSHDNIICGITSVSFSKSGRLLL--------AGYDDFNCNVWDAL------KADRAGVLAGHDNRVSCLGVTD 322 (340)
T ss_dssp -EEECCTTCCSCEEEEEECTTSSEEE--------EEETTSEEEEEETT------TCCEEEEEECCSSCEEEEEECT
T ss_pred -EEEccCCcccceEEEEECCCCCEEE--------EECCCCeEEEEEcc------cCcEeeEeecCCCcEEEEEEcC
Confidence 1112223445799999999888655 44555999999998 5677788999999999999987
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-43 Score=286.09 Aligned_cols=264 Identities=17% Similarity=0.247 Sum_probs=202.6
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecC------CCcEEEEeCCccccccccCC--------ccccccCCCCceeecCCCCC
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGK------DKSVVLWSIQDHITSSATDP--------ATAKSAGSSGSIIKQSPKPG 69 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~------dg~i~vwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 69 (309)
..+|++ .|++++|+|||++|++|+. |+.|++|+..++........ ............. .+..
T Consensus 38 p~~H~~-~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l---~~s~ 113 (357)
T 4g56_B 38 PACMEV-QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL---VASD 113 (357)
T ss_dssp --CCCS-EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE---EEET
T ss_pred cccccC-CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE---EEEC
Confidence 346888 8999999999999999997 78899999876532222111 1111111122221 2345
Q ss_pred CCCcccCCCCCcCcccc----cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEec
Q 021657 70 DGNDKAADGPSVGPRGI----YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 70 ~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (309)
++.+++|+..+.+.... ..+|...|++++|+|++ .+|++|+.|+.|++||+++++ ....+.+|...|++++|+
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA--VLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEC
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc--EEEEEcCCCCCEEEEEEc
Confidence 78899999887765432 34799999999999998 889999999999999998887 778888999999999999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeee--ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF--EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
|....++++++.||.|++||+++ ++++..+ ..+...+++++|+|++..+|++|+.|+.|++||++.
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~------~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~------ 258 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRK------PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN------ 258 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTS------SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC------
T ss_pred cCCCceeeeeccCCceEEEECCC------CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC------
Confidence 93346899999999999999998 5555444 456778999999999877889999999999999987
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEE
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVI 303 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~ 303 (309)
...+..+.+|...|++++|+|++..+++++|.| ++|+|||++ .++++.. .+|.+.|+
T Consensus 259 ---------~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D-------~~i~iwd~~------~~~~~~~-~~H~~~V~ 315 (357)
T 4g56_B 259 ---------PDSAQTSAVHSQNITGLAYSYHSSPFLASISED-------CTVAVLDAD------FSEVFRD-LSHRDFVT 315 (357)
T ss_dssp ---------GGGCEEECCCSSCEEEEEECSSSSCCEEEEETT-------SCEEEECTT------SCEEEEE-CCCSSCEE
T ss_pred ---------CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC-------CEEEEEECC------CCcEeEE-CCCCCCEE
Confidence 345567789999999999999988788877766 999999998 5555554 47999999
Q ss_pred EeeeCC
Q 021657 304 SCTSKP 309 (309)
Q Consensus 304 ~~~~~P 309 (309)
+++|+|
T Consensus 316 ~vafsP 321 (357)
T 4g56_B 316 GVAWSP 321 (357)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 999997
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.9e-43 Score=284.92 Aligned_cols=268 Identities=18% Similarity=0.306 Sum_probs=211.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
++|+||.+ .|++++|+|++++|+||+.||+|+|||..+......... .......... ..+..+..++.+.+|+
T Consensus 58 ~~l~gH~~-~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g--~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 58 RTLKGHGN-KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG--CAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTS--SEEEEESTTSEEEEEE
T ss_pred EEecCCCC-eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCC--CEEEEeeCCCCEEEEE
Confidence 46889999 899999999999999999999999999876533221111 1111111111 1223344566677776
Q ss_pred CCCc------CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-CCC
Q 021657 78 GPSV------GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 150 (309)
Q Consensus 78 ~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~ 150 (309)
.... .....+.+|...|.++.|+|++ ..|++++.|++|++||+++++ ....+.+|...|.+++|+|. +++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECCCSSCC
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCe--EEEEEcCCCCCeEEEEEEeCCCCC
Confidence 5432 3345667899999999999998 789999999999999999888 77888899999999999873 357
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 230 (309)
+|++|+.||.|++||+++ ++++..+..|...|++++|+|++.. +++|+.|+.|++||++.....
T Consensus 212 ~l~sgs~Dg~v~~wd~~~------~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~D~~v~lwd~~~~~~~--------- 275 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRS------GQCVQAFETHESDVNSVRYYPSGDA-FASGSDDATCRLYDLRADREV--------- 275 (354)
T ss_dssp EEEEEETTSCEEEEETTT------CCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEE---------
T ss_pred EEEEEeCCCeEEEEECCC------CcEEEEecCCCCCeEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcEE---------
Confidence 999999999999999999 8899999999999999999999985 679999999999999872211
Q ss_pred CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 231 YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.......+...+.+++|+|++.+++ +|+.|+.|++||+. +++++..+.+|.+.|.+++|+|
T Consensus 276 ----~~~~~~~~~~~~~~~~~s~~g~~l~--------~g~~d~~i~vwd~~------~~~~~~~l~~h~~~v~~l~~sp 336 (354)
T 2pbi_B 276 ----AIYSKESIIFGASSVDFSLSGRLLF--------AGYNDYTINVWDVL------KGSRVSILFGHENRVSTLRVSP 336 (354)
T ss_dssp ----EEECCTTCCSCEEEEEECTTSSEEE--------EEETTSCEEEEETT------TCSEEEEECCCSSCEEEEEECT
T ss_pred ----EEEcCCCcccceeEEEEeCCCCEEE--------EEECCCcEEEEECC------CCceEEEEECCCCcEEEEEECC
Confidence 1112223345789999999887655 44455999999998 6777788899999999999998
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=282.81 Aligned_cols=227 Identities=22% Similarity=0.349 Sum_probs=189.7
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
|.. .|++++|+|++ .|++|+.||+|+|||++++..... ....
T Consensus 81 ~~~-~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~------------------------------------~~~~ 122 (344)
T 4gqb_B 81 TEA-GVADLTWVGER-GILVASDSGAVELWELDENETLIV------------------------------------SKFC 122 (344)
T ss_dssp ESS-CEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEE------------------------------------EEEE
T ss_pred cCC-CEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeE------------------------------------eecc
Confidence 445 69999999985 688999999999999985421110 1123
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
+.+|...|++++|+|++ .+|++|+.|++|++||+++++ ....+.+|...|.+++|+|.+..+|++++.|+.|++||+
T Consensus 123 ~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~--~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~ 199 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQV--VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDT 199 (344)
T ss_dssp EECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc--EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccc
Confidence 45899999999999998 889999999999999999887 788889999999999999944468899999999999999
Q ss_pred CCCCCCCCCCceeeec--cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 167 RNLTSNGVGSPINKFE--GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
++ ++++..+. .+...+++++|+|++..++++|+.||.|++||++. .+++..+.+|..
T Consensus 200 ~~------~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~---------------~~~~~~~~~h~~ 258 (344)
T 4gqb_B 200 RC------PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS---------------TSCVLSSAVHSQ 258 (344)
T ss_dssp TS------SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----------------CCEEEECCSS
T ss_pred cc------cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC---------------CcEEEEEcCCCC
Confidence 98 77777664 34567899999998877888999999999999987 445677889999
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.|++++|+|++..+++++|.| ++|+|||+. .+++ ..+.+|.+.|.+++|+|
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D-------~~i~vwd~~------~~~~-~~~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSED-------CSLAVLDSS------LSEL-FRSQAHRDFVRDATWSP 309 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETT-------SCEEEECTT------CCEE-EEECCCSSCEEEEEECS
T ss_pred CEEEEEEccCCCeEEEEEeCC-------CeEEEEECC------CCcE-EEEcCCCCCEEEEEEeC
Confidence 999999999987778877666 999999998 4443 45789999999999997
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.7e-43 Score=280.38 Aligned_cols=209 Identities=22% Similarity=0.324 Sum_probs=178.9
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+.+|.+ .|++++|+|+|++|++|+.||+|++||+++ .+.
T Consensus 123 ~~~H~~-~V~~v~~spdg~~l~sgs~d~~i~iwd~~~----------------------------------------~~~ 161 (344)
T 4gqb_B 123 KYEHDD-IVSTVSVLSSGTQAVSGSKDICIKVWDLAQ----------------------------------------QVV 161 (344)
T ss_dssp EECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTT----------------------------------------TEE
T ss_pred ccCCCC-CEEEEEECCCCCEEEEEeCCCeEEEEECCC----------------------------------------CcE
Confidence 458999 899999999999999999999999999974 345
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
+..+.+|...|++++|+|++..+|++|+.|++|++||+++++.........+...+.+++|+|.++++|++|+.||.|++
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~ 241 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSL 241 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEE
Confidence 66778899999999999998778999999999999999988732222234566679999999966788999999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
||+++ ++++..+.+|...|++++|+|++..+|++|+.|++|+|||++. . .+..+.+|.
T Consensus 242 wd~~~------~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~---------------~-~~~~~~~H~ 299 (344)
T 4gqb_B 242 VDTKS------TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL---------------S-ELFRSQAHR 299 (344)
T ss_dssp EESCC--------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC---------------C-EEEEECCCS
T ss_pred EECCC------CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC---------------C-cEEEEcCCC
Confidence 99999 8899999999999999999999976788999999999999986 2 234568999
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..|++++|+|++..+++++|.| ++|++|++..
T Consensus 300 ~~V~~v~~sp~~~~llas~s~D-------~~v~~w~v~~ 331 (344)
T 4gqb_B 300 DFVRDATWSPLNHSLLTTVGWD-------HQVVHHVVPT 331 (344)
T ss_dssp SCEEEEEECSSSTTEEEEEETT-------SCEEEEECCC
T ss_pred CCEEEEEEeCCCCeEEEEEcCC-------CeEEEEECCC
Confidence 9999999999999888877766 9999999983
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.9e-43 Score=287.87 Aligned_cols=275 Identities=19% Similarity=0.340 Sum_probs=210.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
++|+||.+ .|++++|+|++++|+||+.||+|+|||+.++........ .......... ..+..+..++.+.+|+
T Consensus 60 ~~l~gH~~-~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g--~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 60 RTLQGHSG-KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG--QSVACGGLDSACSIFN 136 (380)
T ss_dssp EEECCCSS-CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTS--SEEEECCSSSCCEEEE
T ss_pred eccccccc-EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCC--CEEEEeeCCCcEEEEE
Confidence 56899999 899999999999999999999999999987643322211 1111111222 2334456778888887
Q ss_pred CCCc-------CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe-----eccCCceeEEEec
Q 021657 78 GPSV-------GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-----KAHDADLHCVDWN 145 (309)
Q Consensus 78 ~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~ 145 (309)
.... .....+.+|.+.|.++.|.|+++..|++|+.|++|++||+++++ ....+ .+|...|.+++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EEEEECCCSSSSCCSCEEEEEEC
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EEEEeecccCCCCccCeEEEEee
Confidence 6542 23456789999999999999876789999999999999999887 44444 5788999999998
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
|.++++|++|+.|+.|++||++.. ...+..+.+|...|++++|+|++.+ |++|+.|+.|++||++........
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~D~~i~lwd~~~~~~~~~~- 287 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRIT-----SRAVRTYHGHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDMRTGHQLQVY- 287 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTT-----CCCCEEECCCSSCCCEEEECTTSSE-EEEECSSSCEEEEETTTTEEEEEE-
T ss_pred cCCCCEEEEEECCCeEEEEECCCC-----CcceEEECCcCCCeEEEEEecCCCe-EEEEcCCCeEEEEECCCCcEEEEe-
Confidence 768899999999999999999852 5778889999999999999999996 679999999999999873221100
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh----hcccce
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL----EKFKAH 301 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~----~~h~~~ 301 (309)
... ......+...|.+++|+|++.+++ +|+.||.|++||+. .++.+..+ .+|.+.
T Consensus 288 ~~~-------~~~~~~~~~~v~~~~~s~~g~~l~--------~g~~dg~i~vwd~~------~~~~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 288 NRE-------PDRNDNELPIVTSVAFSISGRLLF--------AGYSNGDCYVWDTL------LAEMVLNLGTLQNSHEGR 346 (380)
T ss_dssp CCC-------CSSSCCSSCSCSEEEECSSSSEEE--------EECTTSCEEEEETT------TCCEEEEECCSCSSCCCC
T ss_pred ccc-------ccccccccCceEEEEECCCCCEEE--------EEECCCCEEEEECC------CCceEEEEecccCCCCCc
Confidence 000 000112334589999999988766 55556999999997 44444444 689999
Q ss_pred EEEeeeCC
Q 021657 302 VISCTSKP 309 (309)
Q Consensus 302 v~~~~~~P 309 (309)
|.+++|+|
T Consensus 347 v~~l~~s~ 354 (380)
T 3iz6_a 347 ISCLGLSS 354 (380)
T ss_dssp CCEEEECS
T ss_pred eEEEEECC
Confidence 99999987
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=283.49 Aligned_cols=292 Identities=16% Similarity=0.273 Sum_probs=214.3
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc-------ccCCccccccCCCCceeecCCCCCCCCc
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS-------ATDPATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
+++|++|.++.|++++|+|+|++|++|+.|++|+|||++++.... .............. ..+..+..++.+
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g--~~l~s~s~D~~v 85 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG--NYLASASFDATT 85 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS--SEEEEEETTSCE
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC--CEEEEEECCCcE
Confidence 357899988789999999999999999999999999998653111 11111111112121 223344567888
Q ss_pred ccCCCCCc--CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-ceEEEeeccCCceeEEEeccCCCC
Q 021657 74 KAADGPSV--GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-PVIKVEKAHDADLHCVDWNPLDDN 150 (309)
Q Consensus 74 ~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ 150 (309)
.+|+.... +.+..+.+|...|.+++|+|++ .+|++|+.|+.|++||++.+.. .....+..|...|.+++|+| ++.
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~ 163 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQE 163 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-SSS
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-CCC
Confidence 99987654 4567889999999999999998 8899999999999999987642 24556778999999999999 999
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 230 (309)
+|++++.|+.|++||.+... ......+.+|...|++++|+|++++ |++++.|+.|++||....+...........
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~----~~~~~~~~~h~~~v~~l~~sp~g~~-l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDD----WVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp CEEEEETTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEEECTTCTTCCCCC---
T ss_pred EEEEEeCCCcEEEEEecCCC----EEEEEEecCCCCceEEEEECCCCCE-EEEEeCCCeEEEeccccCCCCccceeeccC
Confidence 99999999999999998721 1345788899999999999999996 679999999999997653322111111111
Q ss_pred CCCceeeeecC-CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCCh--hh-HhHhhhcccceEEEee
Q 021657 231 YPAGLFFQHAG-HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQ--DE-VLAELEKFKAHVISCT 306 (309)
Q Consensus 231 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~--~~-~~~~~~~h~~~v~~~~ 306 (309)
....++..+.+ |...|.+++|+|++..++ +++.|+.|++|+......... .. ......+|.+.|.+++
T Consensus 239 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~--------s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 310 (345)
T 3fm0_A 239 PSWKCICTLSGFHSRTIYDIAWCQLTGALA--------TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310 (345)
T ss_dssp CEEEEEEEECSSCSSCEEEEEECTTTCCEE--------EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE
T ss_pred CccceeEEecCCCCCcEEEEEEecCCCEEE--------EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE
Confidence 11223444444 888999999999888655 444459999999874221100 00 1123468999999999
Q ss_pred eCC
Q 021657 307 SKP 309 (309)
Q Consensus 307 ~~P 309 (309)
|+|
T Consensus 311 ~~p 313 (345)
T 3fm0_A 311 WNP 313 (345)
T ss_dssp ECS
T ss_pred EeC
Confidence 998
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=275.14 Aligned_cols=242 Identities=19% Similarity=0.336 Sum_probs=205.0
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
.++||.. .|.+++|+|++.++++++.|++|++||+.++......... ......... ..+..+..++.+.+|+.
T Consensus 75 ~l~gh~~-~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg--~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 75 SLEGHQL-GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS--QYLATGTHVGKVNIFGV 151 (321)
T ss_dssp EECCCSS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS--SEEEEECTTSEEEEEET
T ss_pred eeccCCC-CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC--CEEEEEcCCCcEEEEEc
Confidence 5789999 8999999999999999999999999999887443322111 111111111 12334456788999999
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.+.+....+..|...|.+++|+|++ .+|++|+.||.|++||+++++ ....+.+|..+|.+++|+| ++++|++|+.|
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~d 227 (321)
T 3ow8_A 152 ESGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGK--LLHTLEGHAMPIRSLTFSP-DSQLLVTASDD 227 (321)
T ss_dssp TTCSEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--EEEEECCCSSCCCEEEECT-TSCEEEEECTT
T ss_pred CCCceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc--EEEEEcccCCceeEEEEcC-CCCEEEEEcCC
Confidence 9999888899999999999999998 889999999999999998887 6778889999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.|++||+++ .+.+..+.+|...|.+++|+|++++ |++++.|+.|++||++. ..++..
T Consensus 228 g~i~iwd~~~------~~~~~~~~~h~~~v~~~~~sp~~~~-l~s~s~D~~v~iwd~~~---------------~~~~~~ 285 (321)
T 3ow8_A 228 GYIKIYDVQH------ANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGT---------------RTCVHT 285 (321)
T ss_dssp SCEEEEETTT------CCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTT---------------TEEEEE
T ss_pred CeEEEEECCC------cceeEEEcCCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCC---------------CEEEEE
Confidence 9999999998 8888999999999999999999996 67999999999999987 456777
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.+|...|.+++|+|++..++ +++.||.|++||+.
T Consensus 286 ~~~h~~~v~~v~~s~~g~~l~--------s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 286 FFDHQDQVWGVKYNGNGSKIV--------SVGDDQEIHIYDCP 320 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEE--------EEETTCCEEEEECC
T ss_pred EcCCCCcEEEEEECCCCCEEE--------EEeCCCeEEEEeCC
Confidence 889999999999999888655 44455999999974
No 12
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-41 Score=268.11 Aligned_cols=244 Identities=22% Similarity=0.341 Sum_probs=193.5
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
..+.+|.+ .|++++|+|+|++|++|+.|++|+|||+... ..
T Consensus 3 ~~~~~h~~-~V~~~~~s~~g~~las~s~D~~v~iw~~~~~--------------------------------------~~ 43 (297)
T 2pm7_B 3 VIANAHNE-MIHDAVMDYYGKRMATCSSDKTIKIFEVEGE--------------------------------------TH 43 (297)
T ss_dssp EECCSCSS-CEEEEEECTTSSEEEEEETTSCEEEEEBCSS--------------------------------------CB
T ss_pred eeccCCcC-ceEEEEECCCCCEEEEEeCCCEEEEEecCCC--------------------------------------Cc
Confidence 46889999 8999999999999999999999999998631 22
Q ss_pred CcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC--CCeEEEEcC
Q 021657 82 GPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD--DNLILTGSA 157 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~ 157 (309)
+.+..+.+|.++|++++|+++ + .+|++|+.|++|++||+++++......+..|...|.+++|+| + +.+|++++.
T Consensus 44 ~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~g~~l~s~s~ 121 (297)
T 2pm7_B 44 KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPMLLVASS 121 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECC-GGGCSEEEEEET
T ss_pred EEEEEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCc-CCCCcEEEEEEC
Confidence 345678899999999999864 5 789999999999999998775435566778999999999999 6 789999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC------------CcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK------------SSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
|+.|++||++... ......+.+|...|++++|+|++ ..+|++|+.|+.|++||++.....
T Consensus 122 d~~v~~wd~~~~~----~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~---- 193 (297)
T 2pm7_B 122 DGKVSVVEFKENG----TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT---- 193 (297)
T ss_dssp TSEEEEEEBCSSS----CBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE----
T ss_pred CCcEEEEEecCCC----ceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce----
Confidence 9999999998731 11245677899999999999973 125789999999999999862211
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCC--CeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEE
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASD--PWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVI 303 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~ 303 (309)
......+.+|...|.+++|+|++ ..+++++|.| ++|++||++....... ..+.....|...|.
T Consensus 194 -------~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D-------~~v~iWd~~~~~~~~~-~~~~~~~~~~~~v~ 258 (297)
T 2pm7_B 194 -------YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD-------RTCIIWTQDNEQGPWK-KTLLKEEKFPDVLW 258 (297)
T ss_dssp -------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-------SCEEEEEESSTTSCCE-EEESSSSCCSSCEE
T ss_pred -------EEEEEEecCCCCceEEEEECCCCCCceEEEEEECC-------CcEEEEEeCCCCCccc-eeeeecccCCCcEE
Confidence 12455778999999999999986 4677766666 9999999984210000 01111256888999
Q ss_pred EeeeCC
Q 021657 304 SCTSKP 309 (309)
Q Consensus 304 ~~~~~P 309 (309)
+++|+|
T Consensus 259 ~~~~s~ 264 (297)
T 2pm7_B 259 RASWSL 264 (297)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 999997
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.3e-42 Score=272.34 Aligned_cols=231 Identities=22% Similarity=0.398 Sum_probs=196.3
Q ss_pred cccCCCCCcceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.+|+||.+ .|++++|+|++ ++|+||+.|++|++|++..... ..
T Consensus 11 ~~l~gH~~-~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-----------------------------------~~ 54 (319)
T 3frx_A 11 GTLEGHNG-WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-----------------------------------KF 54 (319)
T ss_dssp EEECCCSS-CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-----------------------------------EE
T ss_pred EEEccccc-eEEEEEccCCCccEEEEecCCccEEEecCCCCCc-----------------------------------cc
Confidence 47899999 89999999965 8999999999999999864211 01
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
..++..+.+|...|.+++|+|++ .+|++|+.|++|++||+.+++ ....+.+|...|.+++|+| ++.+|++|+.|+.
T Consensus 55 ~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~--~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~ 130 (319)
T 3frx_A 55 GVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVATGE--TYQRFVGHKSDVMSVDIDK-KASMIISGSRDKT 130 (319)
T ss_dssp EEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECT-TSCEEEEEETTSC
T ss_pred cccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCC--eeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCe
Confidence 22456788999999999999998 889999999999999999887 6788889999999999999 9999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCC-----cEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS-----SVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
|++||++ +..+..+.+|...|.+++|.|... .++++++.|+.|++||++. ...
T Consensus 131 i~vwd~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~---------------~~~ 188 (319)
T 3frx_A 131 IKVWTIK-------GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ---------------FQI 188 (319)
T ss_dssp EEEEETT-------SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT---------------TEE
T ss_pred EEEEECC-------CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc---------------chh
Confidence 9999997 467788889999999999998543 2567999999999999987 345
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
...+.+|...|.+++|+|++.+++ +|+.||.|++||+. ..+++.++.. ...|.+++|+|
T Consensus 189 ~~~~~~h~~~v~~~~~sp~g~~l~--------s~~~dg~i~iwd~~------~~~~~~~~~~-~~~v~~~~~sp 247 (319)
T 3frx_A 189 EADFIGHNSNINTLTASPDGTLIA--------SAGKDGEIMLWNLA------AKKAMYTLSA-QDEVFSLAFSP 247 (319)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEE--------EEETTCEEEEEETT------TTEEEEEEEC-CSCEEEEEECS
T ss_pred heeecCCCCcEEEEEEcCCCCEEE--------EEeCCCeEEEEECC------CCcEEEEecC-CCcEEEEEEcC
Confidence 567789999999999999887655 45555999999999 6667777764 56899999987
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-41 Score=269.56 Aligned_cols=266 Identities=23% Similarity=0.350 Sum_probs=213.8
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
.+|.+|.+ .|++++|+|++++|++|+.||.|++|++.++........ .......... ..+..+..++.+.+|+
T Consensus 17 ~~~~gh~~-~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 17 FTLAGHTK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEE
T ss_pred EEEcccCC-cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC--CEEEEECCCCEEEEEE
Confidence 35789999 899999999999999999999999999987643322211 1111111111 2233345678999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..+.+.+..+.+|...|.++.|+|++ .+|++|+.|+.|++||+++++ ....+..|..+|.+++|+| ++.+|++++.
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 169 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 169 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECT-TSSEEEEEET
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCE--EEEEecCCCCcEEEEEEcC-CCCEEEEEeC
Confidence 99999999999999999999999998 889999999999999999887 6778888999999999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
||.|++||+++ ++.+..+. .+...+..++|+|++++ +++++.|+.|++||++. ...+
T Consensus 170 d~~i~~wd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~---------------~~~~ 227 (312)
T 4ery_A 170 DGLCRIWDTAS------GQCLKTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSK---------------GKCL 227 (312)
T ss_dssp TSCEEEEETTT------CCEEEEECCSSCCCEEEEEECTTSSE-EEEEETTTEEEEEETTT---------------TEEE
T ss_pred CCcEEEEECCC------CceeeEEeccCCCceEEEEECCCCCE-EEEEcCCCeEEEEECCC---------------CcEE
Confidence 99999999998 77766654 45678999999999996 56899999999999987 3345
Q ss_pred eeecCCCcce--eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 237 FQHAGHRDKV--VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 237 ~~~~~~~~~v--~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+.+|...+ ....+++.+..+++ +|+.||.|++||+. +++.+.++.+|.+.|.+++|+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~-------sg~~dg~i~vwd~~------~~~~~~~~~~h~~~v~~~~~~p 289 (312)
T 4ery_A 228 KTYTGHKNEKYCIFANFSVTGGKWIV-------SGSEDNLVYIWNLQ------TKEIVQKLQGHTDVVISTACHP 289 (312)
T ss_dssp EEECSSCCSSSCCCEEEECSSSCEEE-------ECCTTSCEEEEETT------TCCEEEEECCCSSCEEEEEECS
T ss_pred EEEEecCCceEEEEEEEEeCCCcEEE-------EECCCCEEEEEECC------CchhhhhhhccCCcEEEEeecC
Confidence 5566665543 33445544444555 45555999999998 6778889999999999999998
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-41 Score=291.81 Aligned_cols=281 Identities=19% Similarity=0.290 Sum_probs=211.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc------ccCCccccccCCCCceeecCCC--CCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS------ATDPATAKSAGSSGSIIKQSPK--PGDGND 73 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 73 (309)
+.|.+|.+ .|++++|+|+|++||+|+.||+|+|||+.++.... ...................... ...+.+
T Consensus 53 ~~~~~h~~-~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 53 EIYTEHSH-QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred eEecCCCC-ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 56889999 89999999999999999999999999996542211 1111122222222222222111 123467
Q ss_pred ccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 74 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
.+|+. ......+.+|...|++++|+|+++..|++|+.|++|++||....+ ....+.+|...|.+++|+| ++++|+
T Consensus 132 ~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fsp-dg~~la 206 (611)
T 1nr0_A 132 FLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNP-DGSLFA 206 (611)
T ss_dssp EETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred EEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--EeeeeccccCceEEEEECC-CCCEEE
Confidence 77874 456677899999999999999985579999999999999987766 6778889999999999999 999999
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeec-------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFE-------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~ 226 (309)
+++.|++|++||+++ ++.+..+. +|...|.+++|+|++++ |++++.|++|++||++..........
T Consensus 207 s~s~D~~i~lwd~~~------g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-l~s~s~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 207 STGGDGTIVLYNGVD------GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK-IASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp EEETTSCEEEEETTT------CCEEEECBCTTSSSCSSSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEECCCcEEEEECCC------CcEeeeeccccccccccCCCEEEEEECCCCCE-EEEEeCCCeEEEEeCCCCceeeeecC
Confidence 999999999999988 77777773 79999999999999996 67999999999999986322111000
Q ss_pred C--Cc--------------------------CCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEE
Q 021657 227 R--TT--------------------------NYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIW 278 (309)
Q Consensus 227 ~--~~--------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw 278 (309)
. .. .........+.+|...|++++|+|++.+++ +++.|++|++|
T Consensus 280 ~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~--------s~s~D~~v~~W 351 (611)
T 1nr0_A 280 GTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLF--------SADAEGHINSW 351 (611)
T ss_dssp CSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE--------EEETTSCEEEE
T ss_pred CCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEE--------EEeCCCcEEEE
Confidence 0 00 001123445678999999999999888655 44555999999
Q ss_pred EccccccCChhhHhHhh-hcccceEEEeeeCC
Q 021657 279 RMSDLIYRPQDEVLAEL-EKFKAHVISCTSKP 309 (309)
Q Consensus 279 ~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~P 309 (309)
|+. ++++...+ .+|...|.+++|+|
T Consensus 352 d~~------~~~~~~~~~~~h~~~v~~~~~s~ 377 (611)
T 1nr0_A 352 DIS------TGISNRVFPDVHATMITGIKTTS 377 (611)
T ss_dssp ETT------TCCEEECSSCSCSSCEEEEEECT
T ss_pred ECC------CCceeeecccCCcceEEEEEECC
Confidence 998 44444444 57889999998864
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.4e-42 Score=281.02 Aligned_cols=243 Identities=20% Similarity=0.334 Sum_probs=204.1
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
++|++|.+ .|++++|+|++++|++|+.||+|+|||+.+......... .......... ..+..+..++.+++|+
T Consensus 144 ~~l~~h~~-~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~--~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 144 RTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG--DHIVSASRDKTIKMWE 220 (410)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS--SEEEEEETTSEEEEEE
T ss_pred EEEeccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC--CEEEEEeCCCeEEEEE
Confidence 57899999 899999999999999999999999999987644333221 1111111111 1233456788999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC---------
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD--------- 148 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------- 148 (309)
..+...+..+.+|...|.++.|+|++ .+|++|+.|+.|++||+.+++ ....+..|...|.+++|+| +
T Consensus 221 ~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~ 296 (410)
T 1vyh_C 221 VQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKE--CKAELREHRHVVECISWAP-ESSYSSISEA 296 (410)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECC-SCGGGGGGGC
T ss_pred CCCCcEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc--eeeEecCCCceEEEEEEcC-cccccchhhh
Confidence 99999999999999999999999998 889999999999999998887 6778889999999999999 4
Q ss_pred -----------CCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 149 -----------DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 149 -----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+.+|++|+.|+.|++||+++ +.++..+.+|...|++++|+|++++ +++|+.|+.|++||++.
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~------~~~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVST------GMCLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKN 369 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSC-EEEEETTTEEEEECCTT
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCC------CceEEEEECCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC
Confidence 56899999999999999998 8899999999999999999999997 56999999999999976
Q ss_pred ccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 218 VGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..++..+.+|...|++++|+|++++++ +|+.||+|++|+++
T Consensus 370 ---------------~~~~~~~~~h~~~v~~l~~~~~~~~l~--------sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 370 ---------------KRCMKTLNAHEHFVTSLDFHKTAPYVV--------TGSVDQTVKVWECR 410 (410)
T ss_dssp ---------------SCCCEEEECCSSCEEEEEECSSSSCEE--------EEETTSEEEEEC--
T ss_pred ---------------CceEEEEcCCCCcEEEEEEcCCCCEEE--------EEeCCCcEEEEeCC
Confidence 345567789999999999999888655 55555999999864
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-41 Score=276.16 Aligned_cols=272 Identities=20% Similarity=0.309 Sum_probs=210.2
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----------------------cccccCCCCceee
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----------------------TAKSAGSSGSIIK 63 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~ 63 (309)
+|.+ .|++++|+|+|++|++|+ |+.++||++.++......... ......... ..
T Consensus 62 ~h~~-~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg--~~ 137 (393)
T 1erj_A 62 DHTS-VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG--KF 137 (393)
T ss_dssp ECSS-CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS--SE
T ss_pred CCCC-EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC--CE
Confidence 5888 899999999999999987 789999999876433221110 001111111 12
Q ss_pred cCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEE
Q 021657 64 QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 143 (309)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 143 (309)
+..+..++.+++|+..+.+.+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++ ....+ .+...+.+++
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~--~~~~~-~~~~~v~~~~ 213 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQ--CSLTL-SIEDGVTTVA 213 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--EEEEE-ECSSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCe--eEEEE-EcCCCcEEEE
Confidence 2334568899999999999999999999999999999998 789999999999999998877 44444 3567899999
Q ss_pred eccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeee-------ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF-------EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 144 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
|+|.++.+|++|+.|+.|++||+++ +..+..+ .+|...|.+++|+|++++ +++|+.|+.|++||++
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~------~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSET------GFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTT------CCEEEEEC------CCCSSCEEEEEECTTSSE-EEEEETTSEEEEEEC-
T ss_pred EECCCCCEEEEEcCCCcEEEEECCC------CcEEEeecccccCCCCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEECC
Confidence 9997789999999999999999998 6666666 568889999999999996 6799999999999998
Q ss_pred cccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
........ .......+...+.+|...|.+++|+|++.+++ +|+.|+.|++||+. +++++..+.
T Consensus 287 ~~~~~~~~---~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~--------sgs~D~~v~iwd~~------~~~~~~~l~ 349 (393)
T 1erj_A 287 NANNKSDS---KTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL--------SGSKDRGVLFWDKK------SGNPLLMLQ 349 (393)
T ss_dssp -----------------CEEEEEECCSSCEEEEEECGGGCEEE--------EEETTSEEEEEETT------TCCEEEEEE
T ss_pred CCCCcccc---cCCCCCcceEEEecccCcEEEEEECCCCCEEE--------EEeCCCeEEEEECC------CCeEEEEEC
Confidence 73322110 00111335567789999999999999887655 45555999999998 677888899
Q ss_pred cccceEEEeeeCC
Q 021657 297 KFKAHVISCTSKP 309 (309)
Q Consensus 297 ~h~~~v~~~~~~P 309 (309)
+|.+.|.+++|+|
T Consensus 350 ~h~~~v~~v~~~~ 362 (393)
T 1erj_A 350 GHRNSVISVAVAN 362 (393)
T ss_dssp CCSSCEEEEEECS
T ss_pred CCCCCEEEEEecC
Confidence 9999999999875
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.3e-40 Score=264.01 Aligned_cols=234 Identities=24% Similarity=0.410 Sum_probs=188.1
Q ss_pred cccCCCCCcceEEEEE-----CC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCccc
Q 021657 2 EILTGHQDNAEFALAM-----CP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~-----~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (309)
++|+||.+ .|++++| ++ ++++|+||+.|++|++||+.......
T Consensus 15 ~~l~gH~~-~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~------------------------------ 63 (343)
T 2xzm_R 15 GILEGHSD-WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG------------------------------ 63 (343)
T ss_dssp EEEECCSS-CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS------------------------------
T ss_pred eeeccchh-hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc------------------------------
Confidence 47899999 8999999 77 89999999999999999987431100
Q ss_pred CCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 76 ADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
....+...+.+|...|.+++|+|++ .++++|+.|++|++||+++++ ....+.+|...|.+++|+| ++++|+++
T Consensus 64 ---~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp-~~~~l~s~ 136 (343)
T 2xzm_R 64 ---YFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSP-DNRQILSA 136 (343)
T ss_dssp ---BSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECS-STTEEEEE
T ss_pred ---ccccccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECC-CCCEEEEE
Confidence 0122345678899999999999998 889999999999999999887 6778889999999999999 99999999
Q ss_pred cCCCcEEEEecCCCCCCCCCCcee--eeccCCCCeeEEEEecCCC---------cEEEEecCCCcEEEEeCCcccccccC
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPIN--KFEGHSAAVLCVQWSPDKS---------SVFGSSAEDGLLNIWDYEKVGKKVEQ 224 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~---------~l~~~~~~dg~i~iwd~~~~~~~~~~ 224 (309)
+.|+.|++||+.. ..... ....|...|.+++|+|++. .++++++.|+.|++||...
T Consensus 137 ~~d~~i~~wd~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------- 203 (343)
T 2xzm_R 137 GAEREIKLWNILG------ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF------- 203 (343)
T ss_dssp ETTSCEEEEESSS------CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-------
T ss_pred cCCCEEEEEeccC------CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-------
Confidence 9999999999974 22221 1236788999999999872 2578999999999999542
Q ss_pred CCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEE
Q 021657 225 GPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVIS 304 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~ 304 (309)
.....+.+|...|.+++|+|++.+++ +|+.||.|++||+.. ...+...+ .+...|.+
T Consensus 204 ---------~~~~~~~~h~~~v~~~~~s~~g~~l~--------sgs~dg~v~iwd~~~-----~~~~~~~~-~~~~~v~~ 260 (343)
T 2xzm_R 204 ---------QIRYTFKAHESNVNHLSISPNGKYIA--------TGGKDKKLLIWDILN-----LTYPQREF-DAGSTINQ 260 (343)
T ss_dssp ---------EEEEEEECCSSCEEEEEECTTSSEEE--------EEETTCEEEEEESSC-----CSSCSEEE-ECSSCEEE
T ss_pred ---------ceeEEEcCccccceEEEECCCCCEEE--------EEcCCCeEEEEECCC-----Ccccceee-cCCCcEEE
Confidence 34556788999999999999888655 555559999999953 22222223 35567999
Q ss_pred eeeCC
Q 021657 305 CTSKP 309 (309)
Q Consensus 305 ~~~~P 309 (309)
++|+|
T Consensus 261 v~~sp 265 (343)
T 2xzm_R 261 IAFNP 265 (343)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99987
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.9e-40 Score=265.15 Aligned_cols=240 Identities=20% Similarity=0.290 Sum_probs=196.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccc------cC--CccccccCCCCceeecCCCCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA------TD--PATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
+.+..|.. .|.+++|+|++++|++|+.|+.|++|++.+...... .. ........... .+..+..++.+
T Consensus 91 ~~~~~~~~-~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~l~s~s~d~~i 166 (340)
T 1got_B 91 HAIPLRSS-WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN---QIVTSSGDTTC 166 (340)
T ss_dssp EEEECSSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT---EEEEEETTSCE
T ss_pred eEeecCCc-cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC---cEEEEECCCcE
Confidence 35677888 899999999999999999999999999976421110 00 00001111111 12345568899
Q ss_pred ccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 74 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
++|+..+.+.+..+.+|...|.+++|+|++ .+|++|+.|+.|++||++++. ....+.+|...|.+++|+| ++++|+
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p-~~~~l~ 242 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGM--CRQTFTGHESDINAICFFP-NGNAFA 242 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred EEEECCCCcEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCe--eEEEEcCCcCCEEEEEEcC-CCCEEE
Confidence 999999999999999999999999999998 889999999999999999887 6788889999999999999 999999
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeecc--CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFEG--HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
+|+.||.|++||+++ .+.+..+.. +...|++++|+|++++ +++|+.|+.|++||+..
T Consensus 243 s~s~d~~v~iwd~~~------~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~g~~d~~i~vwd~~~-------------- 301 (340)
T 1got_B 243 TGSDDATCRLFDLRA------DQELMTYSHDNIICGITSVSFSKSGRL-LLAGYDDFNCNVWDALK-------------- 301 (340)
T ss_dssp EEETTSCEEEEETTT------TEEEEEECCTTCCSCEEEEEECTTSSE-EEEEETTSEEEEEETTT--------------
T ss_pred EEcCCCcEEEEECCC------CcEEEEEccCCcccceEEEEECCCCCE-EEEECCCCeEEEEEccc--------------
Confidence 999999999999998 666666643 3357999999999995 67999999999999987
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
...+..+.+|..+|.+++|+|++.+++ ||+.|+.|++||
T Consensus 302 -~~~~~~~~~h~~~v~~~~~s~dg~~l~--------s~s~D~~i~iWd 340 (340)
T 1got_B 302 -ADRAGVLAGHDNRVSCLGVTDDGMAVA--------TGSWDSFLKIWN 340 (340)
T ss_dssp -CCEEEEEECCSSCEEEEEECTTSSCEE--------EEETTSCEEEEC
T ss_pred -CcEeeEeecCCCcEEEEEEcCCCCEEE--------EEcCCccEEecC
Confidence 345667889999999999999887655 555559999996
No 20
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.3e-41 Score=266.23 Aligned_cols=241 Identities=23% Similarity=0.308 Sum_probs=186.3
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.+|.+ +|++++|+|+|++|++|+.|++|+|||+.++. ..
T Consensus 8 ~~~~H~~-~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~--------------------------------------~~ 48 (316)
T 3bg1_A 8 VDTSHED-MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG--------------------------------------QI 48 (316)
T ss_dssp ------C-CEEEEEECGGGCEEEEEETTTEEEEEEEETTE--------------------------------------EE
T ss_pred ecccccC-eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC--------------------------------------cE
Confidence 5679999 89999999999999999999999999987421 11
Q ss_pred cccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC--CCeEEEEcCC
Q 021657 83 PRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD--DNLILTGSAD 158 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d 158 (309)
.+..+.+|...|++++|+++ + .+|++|+.|++|++||+++++......+.+|...|.+++|+| + +.+|++|+.|
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p-~~~g~~lasgs~D 126 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAP-HDYGLILACGSSD 126 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECC-TTTCSCEEEECSS
T ss_pred EEEEEcCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECC-CCCCcEEEEEcCC
Confidence 24567899999999999753 5 789999999999999998875445667788999999999999 6 7899999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC-----------------CcEEEEecCCCcEEEEeCCccccc
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK-----------------SSVFGSSAEDGLLNIWDYEKVGKK 221 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------------~~l~~~~~~dg~i~iwd~~~~~~~ 221 (309)
+.|++||++.... ......+.+|...+.+++|+|+. . +|++|+.|+.|++||++..+.
T Consensus 127 ~~i~lwd~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~- 201 (316)
T 3bg1_A 127 GAISLLTYTGEGQ---WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQ- 201 (316)
T ss_dssp SCEEEEEECSSSC---EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSC-
T ss_pred CCEEEEecCCCCC---cceeeeeccccCCcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCc-
Confidence 9999999987210 11245567888999999999973 4 478999999999999975211
Q ss_pred ccCCCCCcCCCCceeeeecCCCcceeeEEEccCC---CeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc
Q 021657 222 VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASD---PWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF 298 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h 298 (309)
......+.+|...|.+++|+|++ ..+++++|.| ++|++|++...... ......+..|
T Consensus 202 -----------~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D-------~~v~iw~~~~~~~~--~~~~~~~~~~ 261 (316)
T 3bg1_A 202 -----------WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD-------GRVFIWTCDDASSN--TWSPKLLHKF 261 (316)
T ss_dssp -----------EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT-------CEEEEEECSSTTCC--CCBCCEEEEC
T ss_pred -----------cceeeecccCCCceEEEEecCCCCCCCceEEEEcCC-------CeEEEEEccCcccc--chhhhhhhcC
Confidence 12455678999999999999986 2467766655 99999999842100 0112345678
Q ss_pred cceEEEeeeCC
Q 021657 299 KAHVISCTSKP 309 (309)
Q Consensus 299 ~~~v~~~~~~P 309 (309)
.+.|++++|+|
T Consensus 262 ~~~v~~v~~sp 272 (316)
T 3bg1_A 262 NDVVWHVSWSI 272 (316)
T ss_dssp SSCEEEEEECT
T ss_pred CCcEEEEEEcC
Confidence 89999999997
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-40 Score=263.79 Aligned_cols=242 Identities=19% Similarity=0.283 Sum_probs=185.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
++|++|.+ +|++++|+|+ +|++|+.|++|++||+..+. .
T Consensus 8 ~~~~~h~~-~v~~~~~s~~--~las~~~D~~i~lw~~~~~~--------------------------------------~ 46 (330)
T 2hes_X 8 KSLKLYKE-KIWSFDFSQG--ILATGSTDRKIKLVSVKYDD--------------------------------------F 46 (330)
T ss_dssp EEEECCSS-CEEEEEEETT--EEEEEESSSCEEEEECSSSC--------------------------------------C
T ss_pred eeeccCCC-ceeeeccCCC--EEEEEcCCCEEEEEEecCCC--------------------------------------e
Confidence 57899999 8999999987 99999999999999997421 1
Q ss_pred Cccccc-c-cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC-----CcceEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 82 GPRGIY-N-GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-----TSPVIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 82 ~~~~~~-~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
.....+ . +|...|.+++|+|++ .+|++|+.|++|++||+... .......+.+|...|.+++|+| ++++|++
T Consensus 47 ~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las 124 (330)
T 2hes_X 47 TLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLAT 124 (330)
T ss_dssp EEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEE
T ss_pred EEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEE
Confidence 112223 2 399999999999998 88999999999999998542 1234567789999999999999 9999999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
|+.|+.|++||++.... ..+.+..+.+|...|++++|+|++.. |++++.|+.|++||+.... ..
T Consensus 125 ~s~D~~v~iwd~~~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~D~~i~iW~~~~~~-------------~~ 188 (330)
T 2hes_X 125 CSRDKSVWIWETDESGE--EYECISVLQEHSQDVKHVIWHPSEAL-LASSSYDDTVRIWKDYDDD-------------WE 188 (330)
T ss_dssp EETTSCEEEEECCTTCC--CCEEEEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEEEETTE-------------EE
T ss_pred EeCCCEEEEEeccCCCC--CeEEEEEeccCCCceEEEEECCCCCE-EEEEcCCCeEEEEECCCCC-------------ee
Confidence 99999999999954210 03567788899999999999999995 6799999999999987511 13
Q ss_pred eeeeecCCCcceeeEEEccCC-CeEEEEecCCCCCCCCCCeEEEEEccccccCCh--hhHhHhhhc-ccceEEEeeeCC
Q 021657 235 LFFQHAGHRDKVVDFHWNASD-PWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQ--DEVLAELEK-FKAHVISCTSKP 309 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~-~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~--~~~~~~~~~-h~~~v~~~~~~P 309 (309)
++..+.+|...|.+++|+|++ ..++++++.| ++|++||+........ ..++..+.+ |...|.+++|+|
T Consensus 189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-------~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~ 260 (330)
T 2hes_X 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-------STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF 260 (330)
T ss_dssp EEEEECCCSSCEEEEEECCSSSSCEEEEEETT-------SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT
T ss_pred EEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-------CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC
Confidence 566788999999999999984 3456655555 9999999974211000 023344544 889999999975
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.5e-40 Score=266.08 Aligned_cols=209 Identities=25% Similarity=0.379 Sum_probs=178.4
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+.+|.+ .|++++|+|++++|++|+.||+|++||+++ .+.
T Consensus 135 ~~~h~~-~V~~v~~spdg~~l~sgs~dg~v~iwd~~~----------------------------------------~~~ 173 (357)
T 4g56_B 135 KYEHDD-IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ----------------------------------------KAV 173 (357)
T ss_dssp ECCCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTT----------------------------------------TEE
T ss_pred cCCCCC-CEEEEEECCCCCEEEEEeCCCeEEEEECCC----------------------------------------CcE
Confidence 347888 899999999999999999999999999974 344
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
+..+.+|...|++++|+|++..++++++.||.|++||+++++.........+...+.+++|+|.++.+|++|+.|+.|++
T Consensus 174 ~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 174 LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeE
Confidence 56677899999999999998678999999999999999988743344445677889999999955678999999999999
Q ss_pred EecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 164 FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
||+++ ++.+..+.+|...|++++|+|++..+||+|+.|+.|+|||++. .++ ....+|.
T Consensus 254 wd~~~------~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~---------------~~~-~~~~~H~ 311 (357)
T 4g56_B 254 VNIKN------PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF---------------SEV-FRDLSHR 311 (357)
T ss_dssp EESSC------GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS---------------CEE-EEECCCS
T ss_pred EECCC------CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC---------------CcE-eEECCCC
Confidence 99998 8889999999999999999999876788999999999999986 222 3345799
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..|++++|+|.++.+++++|.| |+|++|++..
T Consensus 312 ~~V~~vafsP~d~~~l~s~s~D-------g~v~iW~~~~ 343 (357)
T 4g56_B 312 DFVTGVAWSPLDHSKFTTVGWD-------HKVLHHHLPS 343 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETT-------SCEEEEECC-
T ss_pred CCEEEEEEeCCCCCEEEEEcCC-------CeEEEEECCC
Confidence 9999999999555567766655 9999999973
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-39 Score=278.48 Aligned_cols=260 Identities=24% Similarity=0.448 Sum_probs=211.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc-C--CccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT-D--PATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.+.+|.+ .|++++|+|++++|++++.||.|++||+......... . ............ .+..+..++.+.+|+.
T Consensus 297 ~~~~~h~~-~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 297 QTLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNR 373 (577)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEET
T ss_pred EEEecCCC-CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCC--EEEEEeCCCEEEEEcC
Confidence 46789998 8999999999999999999999999998765221111 1 111111111111 2223445677888884
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
+.+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||. +++ ....+.+|...|++++|+| ++++|++++.|
T Consensus 374 -~~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~-~~~--~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d 447 (577)
T 2ymu_A 374 -NGQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQ--LLQTLTGHSSSVWGVAFSP-DDQTIASASDD 447 (577)
T ss_dssp -TCCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TCC--EEEEEECCSSCEEEEEECT-TSSEEEEEETT
T ss_pred -CCCEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeC-CCC--EEEEecCCCCCeEEEEECC-CCCEEEEEcCC
Confidence 556777888999999999999998 78999999999999996 344 5777889999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.|++||.. ++.+..+.+|...|++++|+|++++ +++++.|+.|++||... .++..
T Consensus 448 ~~v~~w~~~-------~~~~~~~~~~~~~v~~~~~spd~~~-las~~~d~~i~iw~~~~----------------~~~~~ 503 (577)
T 2ymu_A 448 KTVKLWNRN-------GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNG----------------QLLQT 503 (577)
T ss_dssp SEEEEEETT-------SCEEEEEECCSSCEEEEEECTTSCE-EEEEETTSEEEEEETTS----------------CEEEE
T ss_pred CEEEEEECC-------CCEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCEEEEEcCCC----------------CEEEE
Confidence 999999964 6788889999999999999999995 67999999999999643 35667
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+.+|...|++++|+|++.+|+ +++.||.|++||.. ++++.++.+|.+.|++++|+|
T Consensus 504 ~~~h~~~v~~l~~s~dg~~l~--------s~~~dg~v~lwd~~-------~~~~~~~~~h~~~v~~~~fs~ 559 (577)
T 2ymu_A 504 LTGHSSSVRGVAFSPDGQTIA--------SASDDKTVKLWNRN-------GQLLQTLTGHSSSVWGVAFSP 559 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEE--------EEETTSEEEEECTT-------SCEEEEEECCSSCEEEEEECT
T ss_pred EeCCCCCEEEEEEcCCCCEEE--------EEECcCEEEEEeCC-------CCEEEEEcCCCCCEEEEEEcC
Confidence 889999999999999888655 44445999999964 567888999999999999997
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.7e-39 Score=261.45 Aligned_cols=246 Identities=19% Similarity=0.304 Sum_probs=192.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC---------Cc--cccccCCCCceeecCCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD---------PA--TAKSAGSSGSIIKQSPKPGD 70 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~~~~~~~ 70 (309)
+.+++|.. .|.+++|+|++++|++|+.|+.|++||+.......... .. ........ ....+..+..+
T Consensus 102 ~~~~~h~~-~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~-~~~~l~s~s~D 179 (380)
T 3iz6_a 102 HAIKLHCP-WVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPD-QETRLITGSGD 179 (380)
T ss_dssp EEEECCCT-TCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSS-SSSCEEEECTT
T ss_pred eEEecCCC-CEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecC-CCCEEEEECCC
Confidence 45778998 89999999999999999999999999997542111000 00 00000000 01123345678
Q ss_pred CCcccCCCCCcCccccc-----ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEec
Q 021657 71 GNDKAADGPSVGPRGIY-----NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 71 ~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (309)
+.+++|+..+.+.+..+ .+|...|.++.|++.+..+|++|+.|+.|++||++.... ....+.+|...|.+++|+
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-~~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR-AVRTYHGHEGDINSVKFF 258 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-CCEEECCCSSCCCEEEEC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-ceEEECCcCCCeEEEEEe
Confidence 99999999998877665 679999999999885448999999999999999975432 567788999999999999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCC-------CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS-------AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
| ++.+|++|+.||+|++||+++ +..+..+..+. ..|++++|+|+|++ +++|+.||.|++||+...
T Consensus 259 p-~~~~l~s~s~D~~i~lwd~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 259 P-DGQRFGTGSDDGTCRLFDMRT------GHQLQVYNREPDRNDNELPIVTSVAFSISGRL-LFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp T-TSSEEEEECSSSCEEEEETTT------TEEEEEECCCCSSSCCSSCSCSEEEECSSSSE-EEEECTTSCEEEEETTTC
T ss_pred c-CCCeEEEEcCCCeEEEEECCC------CcEEEEecccccccccccCceEEEEECCCCCE-EEEEECCCCEEEEECCCC
Confidence 9 999999999999999999998 77777665432 24899999999996 669999999999998762
Q ss_pred cccccCCCCCcCCCCceeeee----cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQH----AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+..+ .+|...|.+++|+|++.+++ ||+.|++|++|++.
T Consensus 331 ---------------~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~--------sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 331 ---------------EMVLNLGTLQNSHEGRISCLGLSSDGSALC--------TGSWDKNLKIWAFS 374 (380)
T ss_dssp ---------------CEEEEECCSCSSCCCCCCEEEECSSSSEEE--------EECTTSCEEEEECC
T ss_pred ---------------ceEEEEecccCCCCCceEEEEECCCCCEEE--------EeeCCCCEEEEecC
Confidence 222222 67999999999999988655 55566999999998
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=258.31 Aligned_cols=260 Identities=17% Similarity=0.268 Sum_probs=194.9
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccc--c--cccC--CccccccCCCCceeecCCCCCCCCcccCC
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIT--S--SATD--PATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~--~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
..+|.+ .|++++|+|++++|++|+.|++|+|||+..... . .... ........... ..+..+..++.+++|+
T Consensus 57 ~~~h~~-~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~--~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 57 SEGHQR-TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG--NLLATCSRDKSVWVWE 133 (345)
T ss_dssp CSSCSS-CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEE
T ss_pred ccccCC-cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC--CEEEEEECCCeEEEEE
Confidence 368998 899999999999999999999999999876521 1 1111 11111111111 2333455678899998
Q ss_pred CCCcC---cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 78 GPSVG---PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 78 ~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
..... .+..+.+|...|.+++|+|++ .+|++|+.|+.|++||.+.++......+.+|...|.+++|+| ++++|++
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s 211 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLAS 211 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEE
Confidence 87653 356678899999999999998 789999999999999998776445667889999999999999 9999999
Q ss_pred EcCCCcEEEEecCCCCCCC---------CCCceeeecc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccC
Q 021657 155 GSADNSVRMFDRRNLTSNG---------VGSPINKFEG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~---------~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~ 224 (309)
++.|++|++||........ ..+++..+.+ |...|.+++|+|++.. +++++.|+.|++|+..........
T Consensus 212 ~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~vw~~~~~~~~~~~ 290 (345)
T 3fm0_A 212 CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA-LATACGDDAIRVFQEDPNSDPQQP 290 (345)
T ss_dssp EETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC-EEEEETTSCEEEEEECTTSCTTSC
T ss_pred EeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE-EEEEeCCCeEEEEEeCCCCCccee
Confidence 9999999999975432110 0122334444 7889999999999996 679999999999998763221110
Q ss_pred CCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 225 GPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..........+|...|++++|+|+++.+++++|.| |+|++|++..
T Consensus 291 ------~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D-------g~v~~W~~~~ 335 (345)
T 3fm0_A 291 ------TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD-------GEVAFWKYQR 335 (345)
T ss_dssp ------CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT-------SCEEEEEECC
T ss_pred ------eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC-------CcEEEEEecC
Confidence 00011223468999999999999987778877666 9999999983
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=254.31 Aligned_cols=240 Identities=18% Similarity=0.330 Sum_probs=180.4
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
|.+ .|++++|+|++++|++|+.|++|+|||++..... ....+.+..
T Consensus 57 h~~-~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~---------------------------------~~~~~~~~~ 102 (330)
T 2hes_X 57 HKK-AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR---------------------------------TFEMDLLAI 102 (330)
T ss_dssp CCS-CEEEEEECTTSSEEEEEETTSCEEEEEC----------------------------------------CCCEEEEE
T ss_pred ccC-CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc---------------------------------cccceeEEE
Confidence 888 8999999999999999999999999998632100 012234566
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC--cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT--SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
+.+|...|.+++|+|++ .+|++|+.|++|++||++... ......+.+|...|.+++|+| ++.+|++++.|++|++|
T Consensus 103 ~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW 180 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIW 180 (330)
T ss_dssp EC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEE
T ss_pred EcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEE
Confidence 78899999999999998 889999999999999995432 234567789999999999999 99999999999999999
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecC--CCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC-
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD--KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG- 241 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (309)
|.+... .+++..+.+|...|.+++|+|+ +. .+++|+.|+.|++||++....... ........+.+
T Consensus 181 ~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~~~~-------~~~~~~~~~~~~ 248 (330)
T 2hes_X 181 KDYDDD----WECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMGDDEDDQ-------QEWVCEAILPDV 248 (330)
T ss_dssp EEETTE----EEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEEEECTTSC-------EEEEEEEECCSC
T ss_pred ECCCCC----eeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEecCCCcccc-------ceeEEeeecccc
Confidence 998621 2678889999999999999998 44 467999999999999976321100 00122333444
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChh--hHh-Hhhhcccc-eEEEeeeCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQD--EVL-AELEKFKA-HVISCTSKP 309 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~--~~~-~~~~~h~~-~v~~~~~~P 309 (309)
|...|.+++|++++ ++++++.| |.|++|+.. .+ +.+ ..+.+|.. .|.+++|+|
T Consensus 249 h~~~v~~v~~s~~~--~l~s~~~d-------g~v~iw~~~------~~~~~~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 249 HKRQVYNVAWGFNG--LIASVGAD-------GVLAVYEEV------DGEWKVFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp CSSCEEEEEECTTS--CEEEEETT-------SCEEEEEEE------TTEEEEEEEESCTTTTSCEEEEEEC-
T ss_pred cccceEEEEEcCCC--EEEEEeCC-------CEEEEEEcC------CCceEEEeccccccccceEEEEEEec
Confidence 88999999999754 45555544 999999987 33 222 22357877 899999987
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-39 Score=270.29 Aligned_cols=213 Identities=17% Similarity=0.245 Sum_probs=171.6
Q ss_pred ccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
...+|.. .|+||+|+| ++.+||+|+.||.|+|||+.+. ..
T Consensus 114 ~~~~~~~-~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~--------------------------------------~~ 154 (435)
T 4e54_B 114 KAAPFDR-RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK--------------------------------------DK 154 (435)
T ss_dssp EEEECSS-CEEEEEECSSCTTCEEEEETTSCEEEECSSCC--------------------------------------SC
T ss_pred cCCCCCC-CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC--------------------------------------Cc
Confidence 3456777 899999999 5679999999999999999743 11
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.....+.+|.+.|++|+|+|.++.+|++|+.||+|++||+++...........+...+.+++|+| ++.+|++|+.||.|
T Consensus 155 ~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i 233 (435)
T 4e54_B 155 PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNV 233 (435)
T ss_dssp CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBE
T ss_pred eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcE
Confidence 22344568999999999998655899999999999999997655222222223345688999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++||++ ++.+..+.+|...|++++|+|++..++++|+.|+.|++||++..... ..+....+
T Consensus 234 ~~wd~~-------~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~------------~~~~~~~~ 294 (435)
T 4e54_B 234 ILLNMD-------GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK------------ASFLYSLP 294 (435)
T ss_dssp EEEESS-------SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS------------SCCSBCCB
T ss_pred eeeccC-------cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc------------ceEEEeee
Confidence 999987 45677888999999999999999988899999999999999873321 12334467
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|...|++++|+|++.+|+ +|+.||.|+|||+..
T Consensus 295 h~~~v~~~~~spdg~~l~--------s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 295 HRHPVNAACFSPDGARLL--------TTDQKSEIRVYSASQ 327 (435)
T ss_dssp CSSCEEECCBCTTSSEEE--------EEESSSCEEEEESSS
T ss_pred ccccccceeECCCCCeeE--------EEcCCCEEEEEECCC
Confidence 999999999999888655 455559999999983
No 28
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.6e-38 Score=249.59 Aligned_cols=225 Identities=17% Similarity=0.322 Sum_probs=186.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.|++|.. .|++++|+|++++|++|+.|++|+|||+.+ .
T Consensus 59 ~~~~~h~~-~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~----------------------------------------~ 97 (319)
T 3frx_A 59 RSFKGHSH-IVQDCTLTADGAYALSASWDKTLRLWDVAT----------------------------------------G 97 (319)
T ss_dssp EEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTT----------------------------------------T
T ss_pred eEEeCCcc-cEEEEEECCCCCEEEEEeCCCEEEEEECCC----------------------------------------C
Confidence 46889999 899999999999999999999999999974 3
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-----CCCeEEEEc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-----DDNLILTGS 156 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~l~~~~ 156 (309)
+.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++. + ....+.+|...|.+++|.|. ++..+++++
T Consensus 98 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~-~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~ 173 (319)
T 3frx_A 98 ETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKG-Q--CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTS-C--EEEEECCCSSCEEEEEECCC------CCEEEEEE
T ss_pred CeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-C--eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe
Confidence 3456678899999999999998 8899999999999999963 3 46777899999999999982 234899999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
.|+.|++||+++ .+....+.+|...|++++|+|++++ |++|+.||.|++||++. ...+
T Consensus 174 ~d~~i~~wd~~~------~~~~~~~~~h~~~v~~~~~sp~g~~-l~s~~~dg~i~iwd~~~---------------~~~~ 231 (319)
T 3frx_A 174 NDKMVKAWNLNQ------FQIEADFIGHNSNINTLTASPDGTL-IASAGKDGEIMLWNLAA---------------KKAM 231 (319)
T ss_dssp TTSCEEEEETTT------TEEEEEECCCCSCEEEEEECTTSSE-EEEEETTCEEEEEETTT---------------TEEE
T ss_pred CCCEEEEEECCc------chhheeecCCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC---------------CcEE
Confidence 999999999998 7888899999999999999999995 67999999999999987 3344
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHh--------hhcccceEEEeeeC
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAE--------LEKFKAHVISCTSK 308 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~--------~~~h~~~v~~~~~~ 308 (309)
..+.. ...|.+++|+|++..++ +++. +.+++|++.. ...+.. ...|...+.+++|+
T Consensus 232 ~~~~~-~~~v~~~~~sp~~~~la-~~~~--------~~i~v~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~s 295 (319)
T 3frx_A 232 YTLSA-QDEVFSLAFSPNRYWLA-AATA--------TGIKVFSLDP------QYLVDDLRPEFAGYSKAAEPHAVSLAWS 295 (319)
T ss_dssp EEEEC-CSCEEEEEECSSSSEEE-EEET--------TEEEEEEETT------EEEEEEECCCCTTCCGGGCCCEEEEEEC
T ss_pred EEecC-CCcEEEEEEcCCCCEEE-EEcC--------CCcEEEEeCc------CeeeeccCccccccccCcCcceeEEEEC
Confidence 45544 46899999999887654 3333 4699999973 222222 23567789999999
Q ss_pred C
Q 021657 309 P 309 (309)
Q Consensus 309 P 309 (309)
|
T Consensus 296 p 296 (319)
T 3frx_A 296 A 296 (319)
T ss_dssp T
T ss_pred C
Confidence 8
No 29
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-39 Score=265.87 Aligned_cols=243 Identities=12% Similarity=0.121 Sum_probs=187.0
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
++.|.+ +|++++|+|++++|++|+.||.|+|||+.++. .+.
T Consensus 7 ~~~~~~-~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~--------------------------------------~~~ 47 (377)
T 3dwl_C 7 LHILPK-PSYEHAFNSQRTEFVTTTATNQVELYEQDGNG--------------------------------------WKH 47 (377)
T ss_dssp EEECSS-CCSCCEECSSSSEEECCCSSSCBCEEEEETTE--------------------------------------EEE
T ss_pred EecCCC-cEEEEEECCCCCEEEEecCCCEEEEEEccCCc--------------------------------------eEE
Confidence 344566 89999999999999999999999999997421 134
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC-cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++ ......+..|...|.+++|+| ++++|++++.|+.|+
T Consensus 48 ~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 48 ARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVIS 125 (377)
T ss_dssp CCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEE
T ss_pred EEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEE
Confidence 45677899999999999998 889999999999999998765 334666778999999999999 999999999999999
Q ss_pred EEecCCCCCCCCCC---ceeeecc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC---CCCce
Q 021657 163 MFDRRNLTSNGVGS---PINKFEG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN---YPAGL 235 (309)
Q Consensus 163 i~d~~~~~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~ 235 (309)
+||++. .+ ....+.. |...|++++|+|++.+ +++++.|+.|++||++.............. ....+
T Consensus 126 iwd~~~------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 198 (377)
T 3dwl_C 126 VCYFEQ------ENDWWVSKHLKRPLRSTILSLDWHPNNVL-LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTV 198 (377)
T ss_dssp ECCC-----------CCCCEEECSSCCSCEEEEEECTTSSE-EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEE
T ss_pred EEEECC------cccceeeeEeecccCCCeEEEEEcCCCCE-EEEEeCCCEEEEEEEEecccCCCccccccccccchhhh
Confidence 999998 44 4677777 8999999999999985 679999999999999752211111110000 11234
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhH----hHhhhcccceEEEeeeCC
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEV----LAELEKFKAHVISCTSKP 309 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~----~~~~~~h~~~v~~~~~~P 309 (309)
+..+ +|...|.+++|+|++.+++ +++.||.|++||+. .+++ +..+.+|..+|.+++|+|
T Consensus 199 ~~~~-~~~~~v~~~~~sp~~~~l~--------~~~~d~~i~iwd~~------~~~~~~~~~~~~~~~~~~v~~~~~s~ 261 (377)
T 3dwl_C 199 CAEY-PSGGWVHAVGFSPSGNALA--------YAGHDSSVTIAYPS------APEQPPRALITVKLSQLPLRSLLWAN 261 (377)
T ss_dssp EECC-CCSSSEEEEEECTTSSCEE--------EEETTTEEC-CEEC------STTSCEEECCCEECSSSCEEEEEEEE
T ss_pred hhcc-cCCceEEEEEECCCCCEEE--------EEeCCCcEEEEECC------CCCCcceeeEeecCCCCceEEEEEcC
Confidence 5555 8999999999999888655 44455999999999 4555 788899999999999986
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-38 Score=256.78 Aligned_cols=244 Identities=22% Similarity=0.345 Sum_probs=196.9
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
++++++|.+ .|++++|+|++++|++|+.||.|+|||+... +
T Consensus 4 ~~~~~~h~~-~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~--------------------------------------~ 44 (379)
T 3jrp_A 4 VVIANAHNE-LIHDAVLDYYGKRLATCSSDKTIKIFEVEGE--------------------------------------T 44 (379)
T ss_dssp -CCEEECCC-CEEEEEECSSSSEEEEEETTSCEEEEEEETT--------------------------------------E
T ss_pred cEEecCCcc-cEEEEEEcCCCCEEEEEECCCcEEEEecCCC--------------------------------------c
Confidence 467899999 8999999999999999999999999998631 2
Q ss_pred cCcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC--CCeEEEEc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD--DNLILTGS 156 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~ 156 (309)
.+.+..+.+|...|++++|+++ + .+|++++.||.|++||+.+++......+..|...|.+++|+| + +.+|++++
T Consensus 45 ~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~ 122 (379)
T 3jrp_A 45 HKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVAS 122 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEE
T ss_pred ceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCC-CCCCCEEEEec
Confidence 2345567789999999999876 6 889999999999999999876445677778999999999999 7 89999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEec-------------CCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-------------DKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
.|+.|++||++... ......+..|...|.+++|+| ++.. +++++.||.|++||++.....
T Consensus 123 ~d~~i~v~d~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~-- 195 (379)
T 3jrp_A 123 SDGKVSVVEFKENG----TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK-FVTGGADNLVKIWKYNSDAQT-- 195 (379)
T ss_dssp TTSEEEEEECCTTS----CCCEEEEECCTTCEEEEEECCCC----------CTTCE-EEEEETTSCEEEEEEETTTTE--
T ss_pred CCCcEEEEecCCCC----ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCE-EEEEeCCCeEEEEEecCCCcc--
Confidence 99999999999832 234556778899999999999 5774 679999999999999863221
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCC--CeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccce
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASD--PWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAH 301 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~ 301 (309)
......+.+|...|.+++|+|++ ..++++++.| |.|++||+....... ...+.....|...
T Consensus 196 ---------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~-~~~~~~~~~~~~~ 258 (379)
T 3jrp_A 196 ---------YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-------RTCIIWTQDNEQGPW-KKTLLKEEKFPDV 258 (379)
T ss_dssp ---------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-------SCEEEEEESSTTSCC-EEEESSSSCCSSC
T ss_pred ---------eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-------CEEEEEeCCCCCccc-eeeeeccccCCCc
Confidence 23456778899999999999984 5566655555 999999998421100 1233344568899
Q ss_pred EEEeeeCC
Q 021657 302 VISCTSKP 309 (309)
Q Consensus 302 v~~~~~~P 309 (309)
|.+++|+|
T Consensus 259 v~~~~~s~ 266 (379)
T 3jrp_A 259 LWRASWSL 266 (379)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcC
Confidence 99999987
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.5e-38 Score=252.76 Aligned_cols=230 Identities=19% Similarity=0.290 Sum_probs=180.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.|.+|.. .|++++|+|++.+|++|+.|++|++||+++ .
T Consensus 70 ~~l~~h~~-~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~----------------------------------------~ 108 (343)
T 2xzm_R 70 KALTGHNH-FVSDLALSQENCFAISSSWDKTLRLWDLRT----------------------------------------G 108 (343)
T ss_dssp EEECCCSS-CEEEEEECSSTTEEEEEETTSEEEEEETTS----------------------------------------S
T ss_pred chhccCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCC----------------------------------------C
Confidence 35789999 899999999999999999999999999974 3
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe---eccCCceeEEEeccCCC---------
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE---KAHDADLHCVDWNPLDD--------- 149 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~--------- 149 (309)
+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.... .... ..|...|.+++|+| .+
T Consensus 109 ~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~ 183 (343)
T 2xzm_R 109 TTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGEC---KFSSAEKENHSDWVSCVRYSP-IMKSANKVQPF 183 (343)
T ss_dssp CEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCE---EEECCTTTSCSSCEEEEEECC-CCCSCSCCCSS
T ss_pred cEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCc---eeeeecccCCCceeeeeeecc-ccccccccCCC
Confidence 3456678899999999999998 789999999999999997332 2222 26888999999999 65
Q ss_pred -CeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 150 -NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 150 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
.+|++++.||.|++||.. .+....+.+|...|++++|+|++++ |++|+.||.|++||++.....
T Consensus 184 ~~~l~s~~~d~~i~iwd~~-------~~~~~~~~~h~~~v~~~~~s~~g~~-l~sgs~dg~v~iwd~~~~~~~------- 248 (343)
T 2xzm_R 184 APYFASVGWDGRLKVWNTN-------FQIRYTFKAHESNVNHLSISPNGKY-IATGGKDKKLLIWDILNLTYP------- 248 (343)
T ss_dssp CCEEEEEETTSEEEEEETT-------TEEEEEEECCSSCEEEEEECTTSSE-EEEEETTCEEEEEESSCCSSC-------
T ss_pred CCEEEEEcCCCEEEEEcCC-------CceeEEEcCccccceEEEECCCCCE-EEEEcCCCeEEEEECCCCccc-------
Confidence 789999999999999943 5677788899999999999999996 679999999999999652221
Q ss_pred cCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC--h-----hhHhHhhhcccce
Q 021657 229 TNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP--Q-----DEVLAELEKFKAH 301 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~--~-----~~~~~~~~~h~~~ 301 (309)
...+ .+...|.+++|+|++.. ++++ .| +.|++|++......+ . ........+|...
T Consensus 249 -------~~~~-~~~~~v~~v~~sp~~~~-la~~-~d-------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (343)
T 2xzm_R 249 -------QREF-DAGSTINQIAFNPKLQW-VAVG-TD-------QGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ 311 (343)
T ss_dssp -------SEEE-ECSSCEEEEEECSSSCE-EEEE-ES-------SCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCC
T ss_pred -------ceee-cCCCcEEEEEECCCCCE-EEEE-CC-------CCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCc
Confidence 1112 24456999999998764 4333 33 789999997432111 0 0011122378889
Q ss_pred EEEeeeCC
Q 021657 302 VISCTSKP 309 (309)
Q Consensus 302 v~~~~~~P 309 (309)
|.+++|+|
T Consensus 312 v~~~~~sp 319 (343)
T 2xzm_R 312 CTSLAWNA 319 (343)
T ss_dssp EEEEEECS
T ss_pred eEEEEECC
Confidence 99999997
No 32
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-37 Score=244.51 Aligned_cols=215 Identities=20% Similarity=0.354 Sum_probs=172.6
Q ss_pred cccCCCCCcceEEEEECCC--CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT--EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~--~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
++|.+|.+ +|++++|+|+ +++|++|+.||+|+|||++++.
T Consensus 47 ~~l~gH~~-~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~------------------------------------- 88 (297)
T 2pm7_B 47 DTLTGHEG-PVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR------------------------------------- 88 (297)
T ss_dssp EEECCCSS-CEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC-------------------------------------
T ss_pred EEEccccC-CeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc-------------------------------------
Confidence 57899999 8999999874 8999999999999999987421
Q ss_pred CcCcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC---------
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD--------- 148 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------- 148 (309)
...+..+.+|...|.+++|+|+ + .+|++++.|+.|++||++.........+.+|...|.+++|+| +
T Consensus 89 -~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~~~~~~ 165 (297)
T 2pm7_B 89 -WSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP-ATIEEDGEHN 165 (297)
T ss_dssp -BCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECC-CC--------
T ss_pred -eEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecC-CcccccccCC
Confidence 1223445679999999999997 5 789999999999999998764323456778999999999999 5
Q ss_pred ----CCeEEEEcCCCcEEEEecCCCCCCCCCC----ceeeeccCCCCeeEEEEecCC--CcEEEEecCCCcEEEEeCCcc
Q 021657 149 ----DNLILTGSADNSVRMFDRRNLTSNGVGS----PINKFEGHSAAVLCVQWSPDK--SSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 149 ----~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~dg~i~iwd~~~~ 218 (309)
+++|++|+.|+.|++||+++ .. ....+.+|...|.+++|+|++ ..+||+++.|+.|++||++..
T Consensus 166 ~~~~~~~l~sgs~D~~v~lwd~~~------~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 166 GTKESRKFVTGGADNLVKIWKYNS------DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----CCEEEEEETTSCEEEEEEET------TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCcceEEEEcCCCcEEEEEEcC------CCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 47999999999999999987 44 566788999999999999996 346789999999999999762
Q ss_pred cccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.... .........|...|.+++|+|++..|+ +++.|+.|++|+..
T Consensus 240 ~~~~----------~~~~~~~~~~~~~v~~~~~s~~g~~la--------s~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QGPW----------KKTLLKEEKFPDVLWRASWSLSGNVLA--------LSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCC----------EEEESSSSCCSSCEEEEEECSSSCCEE--------EEETTSCEEEEEEC
T ss_pred CCcc----------ceeeeecccCCCcEEEEEECCCCCEEE--------EEcCCCcEEEEEEC
Confidence 1100 001112246788999999999888655 44455999999987
No 33
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.9e-38 Score=253.94 Aligned_cols=241 Identities=22% Similarity=0.307 Sum_probs=193.0
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----------CccccccCCCCceeecCCCCCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----------PATAKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.+..|.. .|.+++|+|++.+|++|+.|+.+++|++.......... ........... ..+..+..++.
T Consensus 101 ~~~~~~~-~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~t~s~D~~ 177 (354)
T 2pbi_B 101 AVTMPCT-WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD--MQILTASGDGT 177 (354)
T ss_dssp EEECSSS-CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS--SEEEEEETTSE
T ss_pred EEecCCC-CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCC--CEEEEEeCCCc
Confidence 4556777 79999999999999999999999999986532111100 00111111111 12334456889
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCe
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 151 (309)
+++|+..+.+.+..+.+|...|.++.|+|+. +.+|++|+.||.|++||+++++ ....+..|...|.+++|+| ++.+
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p-~~~~ 254 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ--CVQAFETHESDVNSVRYYP-SGDA 254 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECT-TSSE
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCCCCCeEEEEEeC-CCCE
Confidence 9999999999999999999999999998852 2789999999999999999888 6778889999999999999 9999
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeeeccC--CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH--SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 229 (309)
|++|+.|++|++||++. .+.+..+..+ ...+.+++|+|++.. +++|+.|+.|++||+..
T Consensus 255 l~s~s~D~~v~lwd~~~------~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~~g~~d~~i~vwd~~~------------ 315 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRA------DREVAIYSKESIIFGASSVDFSLSGRL-LFAGYNDYTINVWDVLK------------ 315 (354)
T ss_dssp EEEEETTSCEEEEETTT------TEEEEEECCTTCCSCEEEEEECTTSSE-EEEEETTSCEEEEETTT------------
T ss_pred EEEEeCCCeEEEEECCC------CcEEEEEcCCCcccceeEEEEeCCCCE-EEEEECCCcEEEEECCC------------
Confidence 99999999999999998 6666555433 347899999999995 67999999999999977
Q ss_pred CCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 230 NYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
...+..+.+|...|.+++|+|++.+++ +|+.|++|++|+
T Consensus 316 ---~~~~~~l~~h~~~v~~l~~spdg~~l~--------sgs~D~~v~vW~ 354 (354)
T 2pbi_B 316 ---GSRVSILFGHENRVSTLRVSPDGTAFC--------SGSWDHTLRVWA 354 (354)
T ss_dssp ---CSEEEEECCCSSCEEEEEECTTSSCEE--------EEETTSEEEEEC
T ss_pred ---CceEEEEECCCCcEEEEEECCCCCEEE--------EEcCCCCEEecC
Confidence 345567789999999999999888655 555559999996
No 34
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-37 Score=254.77 Aligned_cols=238 Identities=21% Similarity=0.403 Sum_probs=194.9
Q ss_pred cccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
..+.+|.+ .|++++|+| ++++|++|+.||+|+|||+.++.... ..
T Consensus 75 ~~~~~h~~-~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~---------------------------------~~ 120 (402)
T 2aq5_A 75 PLVCGHTA-PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL---------------------------------PL 120 (402)
T ss_dssp CCBCCCSS-CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS---------------------------------CB
T ss_pred ceEecCCC-CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc---------------------------------cc
Confidence 45789999 899999999 99999999999999999998542111 01
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe--eccCCceeEEEeccCCCCeEEEEcCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE--KAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.+++..+.+|...|.+++|+|++..+|++++.||.|++||+++++ ....+ ..|...|.+++|+| ++.+|++++.|
T Consensus 121 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 197 (402)
T 2aq5_A 121 REPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSR-DGALICTSCRD 197 (402)
T ss_dssp CSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECT-TSSCEEEEETT
T ss_pred CCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEecCCCCCceEEEEECC-CCCEEEEEecC
Confidence 134567788999999999999986799999999999999999877 56666 78999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeee-ccCCCC-eeEEEEecCCCcEEEEe---cCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKF-EGHSAA-VLCVQWSPDKSSVFGSS---AEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
|.|++||+++ ++.+..+ ..|... +.+++|+|++.. +++| +.|+.|++||++......
T Consensus 198 ~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~~d~~i~iwd~~~~~~~~----------- 259 (402)
T 2aq5_A 198 KRVRVIEPRK------GTVVAEKDRPHEGTRPVHAVFVSEGKI-LTTGFSRMSERQVALWDTKHLEEPL----------- 259 (402)
T ss_dssp SEEEEEETTT------TEEEEEEECSSCSSSCCEEEECSTTEE-EEEEECTTCCEEEEEEETTBCSSCS-----------
T ss_pred CcEEEEeCCC------CceeeeeccCCCCCcceEEEEcCCCcE-EEEeccCCCCceEEEEcCccccCCc-----------
Confidence 9999999998 8888888 677765 899999999984 6688 789999999998733211
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhH-hHhhhcc--cceEEEeeeCC
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEV-LAELEKF--KAHVISCTSKP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~~~h--~~~v~~~~~~P 309 (309)
......|...+.+++|+|++..++++++.| |.|++||+. .+++ +..+..| ..+|.+++|+|
T Consensus 260 --~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d-------g~i~i~d~~------~~~~~~~~l~~~~~~~~v~~~~~sp 323 (402)
T 2aq5_A 260 --SLQELDTSSGVLLPFFDPDTNIVYLCGKGD-------SSIRYFEIT------SEAPFLHYLSMFSSKESQRGMGYMP 323 (402)
T ss_dssp --EEEECCCCSSCEEEEEETTTTEEEEEETTC-------SCEEEEEEC------SSTTCEEEEEEECCSSCCSEEEECC
T ss_pred --eEEeccCCCceeEEEEcCCCCEEEEEEcCC-------CeEEEEEec------CCCcceEeecccccCCcccceEEec
Confidence 112234677899999999999888766555 999999998 3442 4445444 58999999987
No 35
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.2e-37 Score=248.45 Aligned_cols=233 Identities=25% Similarity=0.406 Sum_probs=193.1
Q ss_pred cccCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.+|+||.+ .|++|+|+|+ +++|+||+.||+|+|||+.+... ..
T Consensus 32 ~tL~GH~~-~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~-----------------------------------~~ 75 (340)
T 4aow_A 32 GTLKGHNG-WVTQIATTPQFPDMILSASRDKTIIMWKLTRDET-----------------------------------NY 75 (340)
T ss_dssp EEECCCSS-CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS-----------------------------------CS
T ss_pred EEECCccC-CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc-----------------------------------cc
Confidence 36899999 8999999997 68999999999999999975321 12
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
..+...+.+|...|.+++|+|++ .+|++++.|+.|++|+..... .......+...+..+.+++ .+.+|++++.|+.
T Consensus 76 ~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~ 151 (340)
T 4aow_A 76 GIPQRALRGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKT 151 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECT-TSSCEEEEETTSC
T ss_pred ceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccccceEEeecccc--eeeeecCCCCceeEEEEee-cCccceeecCCCe
Confidence 23456678899999999999998 889999999999999998776 5666677888899999999 8999999999999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCc-EEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS-VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
+++||+... .........|...+..++|++++.. ++++++.|+.|++||++. ......+
T Consensus 152 ~~~~d~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~---------------~~~~~~~ 211 (340)
T 4aow_A 152 IKLWNTLGV-----CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---------------CKLKTNH 211 (340)
T ss_dssp EEEECTTSC-----EEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---------------TEEEEEE
T ss_pred EEEEEeCCC-----ceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC---------------CceeeEe
Confidence 999998862 3344556778899999999987643 567899999999999987 4456677
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+|..+|++++|+|++.+++ +|+.||.|++||+. ..+++..+. +...|.++.|+|
T Consensus 212 ~~h~~~v~~~~~s~~~~~l~--------s~s~Dg~i~iwd~~------~~~~~~~~~-~~~~v~~~~~~~ 266 (340)
T 4aow_A 212 IGHTGYLNTVTVSPDGSLCA--------SGGKDGQAMLWDLN------EGKHLYTLD-GGDIINALCFSP 266 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEE--------EEETTCEEEEEETT------TTEEEEEEE-CSSCEEEEEECS
T ss_pred cCCCCcEEEEEECCCCCEEE--------EEeCCCeEEEEEec------cCceeeeec-CCceEEeeecCC
Confidence 89999999999999887655 44455999999999 566666666 446888988876
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-37 Score=272.41 Aligned_cols=231 Identities=24% Similarity=0.369 Sum_probs=191.2
Q ss_pred ccCCCCCcceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.|++|.+ .|++++|+|++ ++|+||+.|++|++||+...... ..
T Consensus 377 ~l~~H~~-~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~-----------------------------------~~ 420 (694)
T 3dm0_A 377 TMRAHTD-MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA-----------------------------------YG 420 (694)
T ss_dssp EEECCSS-CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC-----------------------------------SC
T ss_pred hcccCCc-eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc-----------------------------------cc
Confidence 5889999 89999999864 78999999999999998742110 11
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.....+.+|...|.+++|+|++ .+|++|+.||.|++||+.+++ ....+.+|...|.+++|+| ++++|++++.|++|
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGV--STRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTI 496 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECT-TSSCEEEEETTSCE
T ss_pred cccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCc--ceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEE
Confidence 2235678899999999999998 889999999999999998887 6778889999999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCcee---eeccCCCCeeEEEEecCCC-cEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 162 RMFDRRNLTSNGVGSPIN---KFEGHSAAVLCVQWSPDKS-SVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
++||... ..... ...+|...|.+++|+|++. .++++++.|+.|++||++. ..+..
T Consensus 497 ~iwd~~~------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~---------------~~~~~ 555 (694)
T 3dm0_A 497 KLWNTLG------ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN---------------CKLRS 555 (694)
T ss_dssp EEECTTS------CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---------------CCEEE
T ss_pred EEEECCC------CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC---------------CcEEE
Confidence 9999865 22222 1246788899999999873 3577999999999999987 34566
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+.+|...|++++|+|++.+++ +|+.||.|++||+. +++++..+. +...|.+++|+|
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~--------sg~~Dg~i~iwd~~------~~~~~~~~~-~~~~v~~~~~sp 612 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCA--------SGGKDGVVLLWDLA------EGKKLYSLE-ANSVIHALCFSP 612 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEE--------EEETTSBCEEEETT------TTEEEECCB-CSSCEEEEEECS
T ss_pred EEcCCCCCEEEEEEeCCCCEEE--------EEeCCCeEEEEECC------CCceEEEec-CCCcEEEEEEcC
Confidence 7889999999999999887654 44555999999998 566666665 456799999987
No 37
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.8e-38 Score=259.00 Aligned_cols=266 Identities=14% Similarity=0.162 Sum_probs=207.5
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccc------cccccCC----ccccccCCC----C-ceeecCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI------TSSATDP----ATAKSAGSS----G-SIIKQSP 66 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~------~~~~~~~----~~~~~~~~~----~-~~~~~~~ 66 (309)
+.|++|.+ +|++++|+| ++|++|+.||.|++||+.+.. ....... ......... . ....+..
T Consensus 10 ~~~~~h~~-~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 10 NAGKAHDA-DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EESSCSSS-CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhc-CeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 46889999 899999998 899999999999999998765 1111111 011111111 1 0023334
Q ss_pred CCCCCCcccCCCCCcCc-----ccccccc-----cCCeEEEEEe----cCCCcE-EEEEcCCCeEEEEEcCC------CC
Q 021657 67 KPGDGNDKAADGPSVGP-----RGIYNGH-----EDTVEDVTFC----PSSAQE-FCSVGDDSCLILWDARV------GT 125 (309)
Q Consensus 67 ~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~-l~s~~~dg~i~iwd~~~------~~ 125 (309)
+..++.+.+|+..+.+. ...+..| ...|.+++|+ |++ .+ |++++.||.|++||++. .+
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccc
Confidence 45678999999888877 7888888 5999999999 988 77 99999999999999987 44
Q ss_pred cce---EEEe-------eccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc---C---CCCee
Q 021657 126 SPV---IKVE-------KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG---H---SAAVL 189 (309)
Q Consensus 126 ~~~---~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---~---~~~v~ 189 (309)
... ...+ ..|...|.+++|+| ++ ++++++.||.|++||+++ .+.+..+.. | ...|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELST------LRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTT------TEEEEEEECCC---CCCCCEE
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCC------CceeEEEeccccccccCCccc
Confidence 211 0134 45888999999999 88 999999999999999998 888899988 8 99999
Q ss_pred EEEEecCCCcEEEEecCC---CcEEEEeCCcccccccCCCCCcCCCCceeeeecC-------------CCcceeeEEEcc
Q 021657 190 CVQWSPDKSSVFGSSAED---GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG-------------HRDKVVDFHWNA 253 (309)
Q Consensus 190 ~~~~~~~~~~l~~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~ 253 (309)
+++|+|++.+ |++++.| +.|++||++. ...+..+.+ |...|.+++|+|
T Consensus 238 ~i~~~~~~~~-l~~~~~d~~~g~i~i~d~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 301 (397)
T 1sq9_A 238 SVKFSPQGSL-LAIAHDSNSFGCITLYETEF---------------GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND 301 (397)
T ss_dssp EEEECSSTTE-EEEEEEETTEEEEEEEETTT---------------CCEEEEECBC--------CCBSBSSCEEEEEECS
T ss_pred eEEECCCCCE-EEEEecCCCCceEEEEECCC---------------CcccceeccCcccccccccccccCCcEEEEEECC
Confidence 9999999995 6688889 9999999987 234455556 899999999999
Q ss_pred CCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh------cc---------------cceEEEeeeCC
Q 021657 254 SDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE------KF---------------KAHVISCTSKP 309 (309)
Q Consensus 254 ~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~------~h---------------~~~v~~~~~~P 309 (309)
++.+++ +++.||.|++||+. .++++..+. +| ...|.+++|+|
T Consensus 302 ~~~~l~--------~~~~dg~i~iwd~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 364 (397)
T 1sq9_A 302 SGETLC--------SAGWDGKLRFWDVK------TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 364 (397)
T ss_dssp SSSEEE--------EEETTSEEEEEETT------TTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred CCCEEE--------EEeCCCeEEEEEcC------CCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc
Confidence 888655 44455999999998 677777787 77 99999999987
No 38
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-37 Score=245.60 Aligned_cols=246 Identities=17% Similarity=0.222 Sum_probs=197.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+++|.. +|.+++|+|++++|++|+.|++|++||+.++........ .......... ..+..+..++.+++|+
T Consensus 49 ~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~sgs~D~~v~lWd 125 (304)
T 2ynn_A 49 RSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK--PYVLSGSDDLTVKLWN 125 (304)
T ss_dssp EEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEEEE
T ss_pred EEeeccCC-cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC--CEEEEECCCCeEEEEE
Confidence 46778988 899999999999999999999999999988754332221 1111112121 2334566789999999
Q ss_pred CCCc-CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-CCCeEEEE
Q 021657 78 GPSV-GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDNLILTG 155 (309)
Q Consensus 78 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~ 155 (309)
..+. .....+.+|...|.+++|+|.++.+|++|+.|++|++||+++... .......|...+..++|+|. ++.+|++|
T Consensus 126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 204 (304)
T 2ynn_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-NFTLTTGQERGVNYVDYYPLPDKPYMITA 204 (304)
T ss_dssp GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC-SEEEECCCTTCEEEEEECCSTTCCEEEEE
T ss_pred CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc-cceeccCCcCcEEEEEEEEcCCCCEEEEE
Confidence 8876 445678899999999999996558999999999999999987663 33344566788999999862 56799999
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+.|+.|++||+++ ++++..+.+|...|.+++|+|+++. |++|+.||.|++||+++ .++
T Consensus 205 s~D~~i~iWd~~~------~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~Dg~i~iWd~~~---------------~~~ 262 (304)
T 2ynn_A 205 SDDLTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSST---------------YKV 262 (304)
T ss_dssp ETTSEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTT---------------CCE
T ss_pred cCCCeEEEEeCCC------CccceeeCCCCCCEEEEEECCCCCE-EEEEcCCCeEEEEECCC---------------Cce
Confidence 9999999999998 8899999999999999999999995 67999999999999987 455
Q ss_pred eeeecCCCcceeeEEEccCCCe-EEEEecCCCCCCCCCCeEEEEEcc
Q 021657 236 FFQHAGHRDKVVDFHWNASDPW-TVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~-~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...+..|...+.+++|+|++.. +++++++| .+.+|++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~--------g~~~~~~~ 301 (304)
T 2ynn_A 263 EKTLNVGLERSWCIATHPTGRKNYIASGFDN--------GFTVLSLG 301 (304)
T ss_dssp EEEECCSSSSEEEEEECTTCGGGCEEEEETT--------EEEEEECC
T ss_pred eeeccCCCccEEEEEECCCCCceEEEEecCC--------ceEEEEec
Confidence 6677889999999999998865 46666554 78899887
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-37 Score=251.57 Aligned_cols=246 Identities=13% Similarity=0.147 Sum_probs=197.1
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+..|.+ +|++++|+|++++|++|+.|+.|++||+.++. .
T Consensus 2 ~~~~~~~~-~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~--------------------------------------~ 42 (372)
T 1k8k_C 2 AYHSFLVE-PISCHAWNKDRTQIAICPNNHEVHIYEKSGNK--------------------------------------W 42 (372)
T ss_dssp CEEESCSS-CCCEEEECTTSSEEEEECSSSEEEEEEEETTE--------------------------------------E
T ss_pred ceecccCC-CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc--------------------------------------E
Confidence 45677888 89999999999999999999999999987421 1
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+.+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.........|...|.+++|+| ++++|++++.|+.|
T Consensus 43 ~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 43 VQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVI 120 (372)
T ss_dssp EEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSE
T ss_pred EeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEE
Confidence 1456677899999999999998 889999999999999998776333444567899999999999 99999999999999
Q ss_pred EEEecCCCCCCCCCCc---ee-eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC---CcCCCCc
Q 021657 162 RMFDRRNLTSNGVGSP---IN-KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR---TTNYPAG 234 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~---~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~ 234 (309)
++||++. ... .. ....|...|.+++|+|++.+ +++++.||.|++||++........... .......
T Consensus 121 ~i~d~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 121 SICYFEQ------ENDWWVCKHIKKPIRSTVLSLDWHPNSVL-LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp EEEEEET------TTTEEEEEEECTTCCSCEEEEEECTTSSE-EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred EEEEecC------CCcceeeeeeecccCCCeeEEEEcCCCCE-EEEEcCCCCEEEEEcccccccccccccccccccchhh
Confidence 9999998 442 22 33567889999999999985 679999999999998642211100000 0011235
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+..+.+|...|.+++|+|++.+++ +++.||.|++||+. +++++..+..|..+|.+++|+|
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~l~--------~~~~d~~i~i~d~~------~~~~~~~~~~~~~~v~~~~~~~ 254 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSANGSRVA--------WVSHDSTVCLADAD------KKMAVATLASETLPLLAVTFIT 254 (372)
T ss_dssp EEEECCCCSSCEEEEEECSSSSEEE--------EEETTTEEEEEEGG------GTTEEEEEECSSCCEEEEEEEE
T ss_pred heEecCCCCCeEEEEEECCCCCEEE--------EEeCCCEEEEEECC------CCceeEEEccCCCCeEEEEEec
Confidence 6667778999999999999887655 44455999999999 6788888999999999999986
No 40
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.8e-37 Score=255.47 Aligned_cols=251 Identities=18% Similarity=0.354 Sum_probs=201.3
Q ss_pred cCCCCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 4 LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
+.+|.+ .|++++|+|+ +.+|++++.||.|++||+........ ......
T Consensus 124 ~~~h~~-~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~------------------------------~~~~~~ 172 (430)
T 2xyi_A 124 KINHEG-EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE------------------------------PSGECQ 172 (430)
T ss_dssp EEEESS-CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC------------------------------TTCCCC
T ss_pred EEcCCC-cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC------------------------------ccccCC
Confidence 456888 8999999997 67999999999999999975311100 001234
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-----eEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-----VIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
+...+.+|...|.+++|+|++..+|++|+.||.|++||+..+... ....+..|...|.+++|+|.++.+|++++.
T Consensus 173 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 252 (430)
T 2xyi_A 173 PDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 252 (430)
T ss_dssp CSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET
T ss_pred CcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC
Confidence 566778899999999999998559999999999999999874321 134566899999999999966789999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
||.|++||+++... .+++..+..|...|++++|+|++++++++|+.||.|++||++..+ ..+.
T Consensus 253 dg~i~i~d~~~~~~---~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--------------~~~~ 315 (430)
T 2xyi_A 253 DQKLMIWDTRNNNT---SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--------------LKLH 315 (430)
T ss_dssp TSEEEEEETTCSCS---SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--------------SCSE
T ss_pred CCeEEEEECCCCCC---CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--------------CCeE
Confidence 99999999998311 257777888999999999999999888899999999999998732 2355
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCCh--------hhHhHhhhcccceEEEeeeCC
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQ--------DEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~--------~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+..|...|.+++|+|++..++++++.| |.|++||+........ .+++..+.+|...|.+++|+|
T Consensus 316 ~~~~h~~~v~~i~~sp~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 316 SFESHKDEIFQVQWSPHNETILASSGTD-------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp EEECCSSCEEEEEECSSCTTEEEEEETT-------SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS
T ss_pred EeecCCCCEEEEEECCCCCCEEEEEeCC-------CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC
Confidence 6778999999999999998888866666 9999999985221110 245666778999999999987
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-37 Score=267.42 Aligned_cols=222 Identities=18% Similarity=0.258 Sum_probs=186.0
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
+.+ .+.+++|+|+|++|++++ ++.|++|++.+ .+....
T Consensus 17 ~~g-~~~~~~~spdg~~l~~~~-~~~v~l~~~~~----------------------------------------~~~~~~ 54 (611)
T 1nr0_A 17 ARG-TAVVLGNTPAGDKIQYCN-GTSVYTVPVGS----------------------------------------LTDTEI 54 (611)
T ss_dssp CTT-CCCCCEECTTSSEEEEEE-TTEEEEEETTC----------------------------------------SSCCEE
T ss_pred ccC-ceeEEeeCCCCCEEEeCC-CCEEEEecCCC----------------------------------------cccCeE
Confidence 445 678999999999999988 56999999863 234556
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC----CcEE
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD----NSVR 162 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~ 162 (309)
+.+|...|++++|+|+| .+|++|+.||+|+|||+.+++......+..|...|.+++|+| +++.|++++.+ +.|+
T Consensus 55 ~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~ 132 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVF 132 (611)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEE
T ss_pred ecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeEEE
Confidence 78899999999999999 899999999999999997665445667788999999999999 99999988765 4688
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+||. +..+..+.+|...|++++|+|++.+.+++|+.|+.|++||.+. ..+...+.+|
T Consensus 133 ~wd~--------~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---------------~~~~~~l~~H 189 (611)
T 1nr0_A 133 LFDT--------GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP---------------FKFKSTFGEH 189 (611)
T ss_dssp ETTT--------CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT---------------BEEEEEECCC
T ss_pred EeeC--------CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC---------------CeEeeeeccc
Confidence 8873 4566788999999999999999987678999999999999876 3456678899
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh-------cccceEEEeeeCC
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE-------KFKAHVISCTSKP 309 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~P 309 (309)
...|.+++|+|++.+ ++ +|+.|++|++||+. +++++..+. +|.+.|.+++|+|
T Consensus 190 ~~~V~~v~fspdg~~-la-------s~s~D~~i~lwd~~------~g~~~~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 190 TKFVHSVRYNPDGSL-FA-------STGGDGTIVLYNGV------DGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp SSCEEEEEECTTSSE-EE-------EEETTSCEEEEETT------TCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred cCceEEEEECCCCCE-EE-------EEECCCcEEEEECC------CCcEeeeeccccccccccCCCEEEEEECC
Confidence 999999999998875 45 44455999999998 455555552 7999999999997
No 42
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-38 Score=263.21 Aligned_cols=214 Identities=11% Similarity=0.073 Sum_probs=168.5
Q ss_pred cCCCCCcceEEEEECCC------CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCC
Q 021657 4 LTGHQDNAEFALAMCPT------EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~------~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+|.+ .|++++|+|+ +.+||+++.||+|+|||+..+.......
T Consensus 203 l~~~~~-~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~----------------------------- 252 (524)
T 2j04_B 203 IVHSFG-EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF----------------------------- 252 (524)
T ss_dssp EEECCC-SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE-----------------------------
T ss_pred EEecCC-cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc-----------------------------
Confidence 566777 8999999997 5799999999999999997542110000
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEE--EeccCCC-CeEEE
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDD-NLILT 154 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~-~~l~~ 154 (309)
.....+...+.+|...|++++|++++ .|++|+.||+|++||++++.. ....+.+|...|.++ +|+| ++ .+|++
T Consensus 253 ~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~-~g~~~laS 328 (524)
T 2j04_B 253 KMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSD-FEDTVVST 328 (524)
T ss_dssp ECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCT-TSCCEEEE
T ss_pred eeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCC-ceEEeecccccEEEEEEEcCC-CCCeEEEE
Confidence 00112334567899999999999854 799999999999999987643 345577899999999 5677 76 89999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeeccCCC--CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEGHSA--AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
++.|++|++||+++ ++.+..+.+|.. .|.+++|+|++.. +++++.|+.|++||++.
T Consensus 329 ~S~D~tvklWD~~~------~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~--------------- 386 (524)
T 2j04_B 329 VAVDGYFYIFNPKD------IATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRA--------------- 386 (524)
T ss_dssp EETTSEEEEECGGG------HHHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTC---------------
T ss_pred eccCCeEEEEECCC------CCcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcc---------------
Confidence 99999999999998 677666666543 5889999999985 67899999999999987
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..++..+.+|...|++++|+|+++.++ +|+.||+|++||+.
T Consensus 387 ~~~~~~l~gH~~~V~sva~Sp~g~~l~--------Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 387 AFAVHPLVSRETTITAIGVSRLHPMVL--------AGSADGSLIITNAA 427 (524)
T ss_dssp TTCCEEEEECSSCEEEEECCSSCCBCE--------EEETTTEEECCBSC
T ss_pred cccceeeecCCCceEEEEeCCCCCeEE--------EEECCCEEEEEech
Confidence 333456678999999999999988655 44445999998854
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-37 Score=255.51 Aligned_cols=246 Identities=17% Similarity=0.255 Sum_probs=191.8
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcc----cccccc--CC--ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH----ITSSAT--DP--ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~----~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
.|.. .|++++|+|++++|++|+.||.|++||+... ...... .. .......... ...+..+..++.+.+|+
T Consensus 65 ~~~~-~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 65 QVDS-KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-DNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCSS-CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-TTBEEEECSSSCEEBCB
T ss_pred ecCC-ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-CCEEEEEcCCCeEEEEE
Confidence 4777 8999999999999999999999999999872 111111 11 1111111110 11223345678899999
Q ss_pred CCCcC------cc---cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc------CCceeEE
Q 021657 78 GPSVG------PR---GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH------DADLHCV 142 (309)
Q Consensus 78 ~~~~~------~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~~ 142 (309)
..+.+ .. ..+..|...|.+++|+|++..+|++++.||.|++||+++++ ....+..+ ...|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEEE
Confidence 98776 22 23467999999999999955899999999999999998877 55566555 7889999
Q ss_pred EeccCCC-CeEEEEcCCC---cEEEEecCCCCCCCCCCceeeec-cCCCCeeEEEEec-CCCcEEEEecCCCcEEEEeCC
Q 021657 143 DWNPLDD-NLILTGSADN---SVRMFDRRNLTSNGVGSPINKFE-GHSAAVLCVQWSP-DKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 143 ~~~~~~~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~dg~i~iwd~~ 216 (309)
+|+| ++ .++++++.|+ .|++||+++. ..++..+. +|...|.+++|+| ++.. +++++.|+.|++||++
T Consensus 221 ~~~~-~~~~~l~~~~~d~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~~-l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 221 EWHP-KNSTRVATATGSDNDPSILIWDLRNA-----NTPLQTLNQGHQKGILSLDWCHQDEHL-LLSSGRDNTVLLWNPE 293 (416)
T ss_dssp EECS-SCTTEEEEEECCSSSCCCCEEETTST-----TSCSBCCCSCCSSCEEEEEECSSCSSC-EEEEESSSEEEEECSS
T ss_pred EECC-CCCCEEEEEECCCCCceEEEEeCCCC-----CCCcEEeecCccCceeEEEeCCCCCCe-EEEEeCCCCEEEeeCC
Confidence 9999 64 7999999998 9999999983 25677787 8999999999999 7775 6799999999999998
Q ss_pred cccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~ 284 (309)
. ...+..+.+|...|.+++|+|+++.++++++. |+.|++|++....
T Consensus 294 ~---------------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~-------d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 294 S---------------AEQLSQFPARGNWCFKTKFAPEAPDLFACASF-------DNKIEVQTLQNLT 339 (416)
T ss_dssp S---------------CCEEEEEECSSSCCCCEEECTTCTTEEEECCS-------SSEEEEEESCCCC
T ss_pred C---------------CccceeecCCCCceEEEEECCCCCCEEEEEec-------CCcEEEEEccCCC
Confidence 7 44567788999999999999998556665554 5999999998643
No 44
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1e-36 Score=245.10 Aligned_cols=242 Identities=16% Similarity=0.287 Sum_probs=193.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.++||.+ .|++++|+|++++|++|+.||.|++||+.+... ..
T Consensus 5 ~~~~gH~~-~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~------------------------------------~~ 47 (351)
T 3f3f_A 5 PFDSGHDD-LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS------------------------------------NW 47 (351)
T ss_dssp CEECCCSS-CEEEEEECSSSSEEEEEETTSEEEEEEECSSSC------------------------------------CE
T ss_pred ccCccccc-ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCC------------------------------------cc
Confidence 46789999 899999999999999999999999999974211 11
Q ss_pred CcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCc-------ceEEEeeccCCceeEEEeccCC--CC
Q 021657 82 GPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTS-------PVIKVEKAHDADLHCVDWNPLD--DN 150 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~--~~ 150 (309)
+....+.+|...|++++|+|. + .+|++++.||.|++||++.++. .....+..|...|.+++|+| + +.
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~ 125 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGL 125 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCS
T ss_pred eecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCc
Confidence 234566789999999999994 6 8899999999999999987642 24667778999999999999 7 99
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeec-------------cCCCCeeEEEEecC---CCcEEEEecCCCcEEEEe
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFE-------------GHSAAVLCVQWSPD---KSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~---~~~l~~~~~~dg~i~iwd 214 (309)
+|++++.||.|++||+++ .+.+..+. .+...+.+++|+|+ +. ++++++.|+.+.+|+
T Consensus 126 ~l~~~~~dg~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~ 198 (351)
T 3f3f_A 126 KLACLGNDGILRLYDALE------PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQR 198 (351)
T ss_dssp EEEEEETTCEEEEEECSS------TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEE
T ss_pred EEEEecCCCcEEEecCCC------hHHhccccccccccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEc
Confidence 999999999999999998 44333332 56778999999997 66 567999999997777
Q ss_pred CCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC---eEEEEecCCCCCCCCCCeEEEEEcccccc------
Q 021657 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP---WTVVSVSDDCDSTGGGGTLQIWRMSDLIY------ 285 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~s~s~d~~s~~~dg~v~vw~~~~~~~------ 285 (309)
... ++ ...+..+.+|...|.+++|+|++. .++++++.| |.|++||+.....
T Consensus 199 ~~~-~~------------~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~ 258 (351)
T 3f3f_A 199 GKD-GK------------LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD-------GRIRIFKITEKLSPLASEE 258 (351)
T ss_dssp CTT-SC------------EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT-------SCEEEEEEEECC-------
T ss_pred cCC-Cc------------eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC-------CeEEEEeCCCCcCccccCC
Confidence 665 11 224667788999999999999873 567766555 9999999984210
Q ss_pred ----------------------------------CChhhHhHhhhcccceEEEeeeCC
Q 021657 286 ----------------------------------RPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 286 ----------------------------------~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
....+++..+.+|.+.|.+++|+|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 259 SLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp --------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 001255667788999999999987
No 45
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-37 Score=251.99 Aligned_cols=278 Identities=14% Similarity=0.235 Sum_probs=210.9
Q ss_pred ccCCCCCcceEEEEECCC----CCEEEEecCCCcEEEEeCCccccccccCC---------cccc--ccCCCCceeecCCC
Q 021657 3 ILTGHQDNAEFALAMCPT----EPYVLSGGKDKSVVLWSIQDHITSSATDP---------ATAK--SAGSSGSIIKQSPK 67 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~----~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~ 67 (309)
.+++|.+ +|++++|+|+ ...+++++.++.|++||+.++........ .... .+........+..+
T Consensus 13 ~~~~h~~-~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 13 LKEDHNQ-PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EECTTCS-CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred eecCCCC-ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 3458998 8999999984 55677777788999999986633222111 1111 11111112234445
Q ss_pred CCCCCcccCCCCCcCcccccccccCCeEEEEEec-CCCcEEEEEcCCCeEEEEEcCCCCcceEEEe---eccCCceeEEE
Q 021657 68 PGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCP-SSAQEFCSVGDDSCLILWDARVGTSPVIKVE---KAHDADLHCVD 143 (309)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~ 143 (309)
..++.+.+|+..+.+.+..+.+|...|.+++|+| ++ .+|++++.||.|++||+++++ ....+ ..|...|.+++
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDT--LVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTE--EEEEECSTTSCSSCEEEEE
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCe--EEEEecccccccCceeEEE
Confidence 6788999999999999999999999999999999 55 899999999999999998877 55555 67999999999
Q ss_pred eccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec----------------------------cCCCCeeEEEEec
Q 021657 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE----------------------------GHSAAVLCVQWSP 195 (309)
Q Consensus 144 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----------------------------~~~~~v~~~~~~~ 195 (309)
|+| ++++|++++.||.|++||+++ ++.+..+. .|...|.+++|+
T Consensus 169 ~~~-~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 169 YDL-LGEKIMSCGMDHSLKLWRINS------KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp ECT-TSSEEEEEETTSCEEEEESCS------HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred ECC-CCCEEEEecCCCCEEEEECCC------CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 999 999999999999999999987 44443333 388999999999
Q ss_pred CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccC--CCeEEEEecCCCCCCCCCC
Q 021657 196 DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNAS--DPWTVVSVSDDCDSTGGGG 273 (309)
Q Consensus 196 ~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~s~s~d~~s~~~dg 273 (309)
+. ++++++.|+.|++||++.......... ........+..+..|...|.+++|+|+ +.+++ +|+.||
T Consensus 241 -~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~--------~~~~dg 309 (366)
T 3k26_A 241 -GD-LILSKSCENAIVCWKPGKMEDDIDKIK-PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA--------LGNQVG 309 (366)
T ss_dssp -TT-EEEEECSSSEEEEEEESSTTCCGGGCC-TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE--------EECTTS
T ss_pred -CC-EEEEEecCCEEEEEeCCCccccccccc-cCCcchheeccccccCCcEEEEEEcCCCCCcEEE--------EEecCC
Confidence 55 567999999999999987444322211 111223456778889999999999998 66544 455559
Q ss_pred eEEEEEccccccCChhhHhH----hhhcc--cceEEEeeeCC
Q 021657 274 TLQIWRMSDLIYRPQDEVLA----ELEKF--KAHVISCTSKP 309 (309)
Q Consensus 274 ~v~vw~~~~~~~~~~~~~~~----~~~~h--~~~v~~~~~~P 309 (309)
.|++||+. .++++. .+.+| ...|.+++|+|
T Consensus 310 ~i~vwd~~------~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 345 (366)
T 3k26_A 310 KLYVWDLE------VEDPHKAKCTTLTHHKCGAAIRQTSFSR 345 (366)
T ss_dssp CEEEEECC------SSSGGGCEEEEECCTTCCSCEEEEEECT
T ss_pred cEEEEECC------CCCCccccceEEcccccCCceEEEEeCC
Confidence 99999998 444333 67777 78999999987
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.3e-37 Score=248.90 Aligned_cols=221 Identities=16% Similarity=0.218 Sum_probs=177.4
Q ss_pred cccCCCCCcceEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+.+.+|.+ .|++++|+|++ ++|++|+.||.|+|||+.+....
T Consensus 67 ~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------------------------------ 109 (383)
T 3ei3_B 67 RTASPFDR-RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT------------------------------------ 109 (383)
T ss_dssp EEECCCSS-CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE------------------------------------
T ss_pred EeccCCCC-CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc------------------------------------
Confidence 46789998 89999999999 99999999999999999743111
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee---ccCCceeEEEeccCCCCeEEEEcC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK---AHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
......+|...|.+++|+|+++.+|++++.|+.|++||++... ...+. .|...|.+++|+| ++.+|++++.
T Consensus 110 --~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 183 (383)
T 3ei3_B 110 --SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV---IQVFAKTDSWDYWYCCVDVSV-SRQMLATGDS 183 (383)
T ss_dssp --EEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE---EEEEECCCCSSCCEEEEEEET-TTTEEEEEET
T ss_pred --eeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc---eEEEeccCCCCCCeEEEEECC-CCCEEEEECC
Confidence 1122346999999999999444899999999999999998533 34443 3447899999999 9999999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
|+.|++||++ ++++..+..|...|.+++|+|++++++++++.|+.|++||++..... ..++.
T Consensus 184 d~~i~i~d~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----------~~~~~ 245 (383)
T 3ei3_B 184 TGRLLLLGLD-------GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK-----------NSYIA 245 (383)
T ss_dssp TSEEEEEETT-------SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-----------TCEEE
T ss_pred CCCEEEEECC-------CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-----------cceEE
Confidence 9999999994 67888999999999999999999966789999999999999873221 12333
Q ss_pred eecCCCcceeeEEEcc-CCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc
Q 021657 238 QHAGHRDKVVDFHWNA-SDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF 298 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~-~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h 298 (309)
.+ +|...|.+++|+| ++.+++ +++ .|+.|++||+. +.+.+..+.+|
T Consensus 246 ~~-~~~~~v~~~~~s~~~~~~l~-~~~-------~d~~i~iwd~~------~~~~~~~~~~~ 292 (383)
T 3ei3_B 246 EM-PHEKPVNAAYFNPTDSTKLL-TTD-------QRNEIRVYSSY------DWSKPDQIIIH 292 (383)
T ss_dssp EE-ECSSCEEEEEECTTTSCEEE-EEE-------SSSEEEEEETT------BTTSCSEEEEC
T ss_pred Ee-cCCCceEEEEEcCCCCCEEE-EEc-------CCCcEEEEECC------CCccccccccc
Confidence 33 6999999999999 777655 444 44999999998 45555555544
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-36 Score=243.94 Aligned_cols=258 Identities=19% Similarity=0.301 Sum_probs=204.7
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC---------CccccccCCCCceeecCCCCCCCCccc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD---------PATAKSAGSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (309)
.+|.+ .|++++|+|++++|++++ ||.|++||+.+........ ............ .+..+..++.+.+
T Consensus 48 ~~h~~-~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 48 LNHGE-VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC--TLIVGGEASTLSI 123 (337)
T ss_dssp ECCSS-CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS--EEEEEESSSEEEE
T ss_pred ccCCC-ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC--EEEEEcCCCcEEE
Confidence 47888 899999999999999999 9999999998753222111 111111111111 1222345678999
Q ss_pred CCCCCcC--cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEE
Q 021657 76 ADGPSVG--PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 76 ~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 153 (309)
|+..+.+ ....+..|...|.+++|+|++ .+|++++.||.|++||+++++ ....+..|...+.+++|+| ++++|+
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~--~~~~~~~~~~~i~~~~~~~-~~~~l~ 199 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISN-DGTKLW 199 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCc--eeeeeecccCceEEEEECC-CCCEEE
Confidence 9988776 566778899999999999998 889999999999999998877 6777888999999999999 999999
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
+++.||.|++||+++ ++.+..+. +...+.+++|+|+++. +++++.|+.|++||++..
T Consensus 200 ~~~~dg~i~~~d~~~------~~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~~~~~i~~~~~~~~--------------- 256 (337)
T 1gxr_A 200 TGGLDNTVRSWDLRE------GRQLQQHD-FTSQIFSLGYCPTGEW-LAVGMESSNVEVLHVNKP--------------- 256 (337)
T ss_dssp EEETTSEEEEEETTT------TEEEEEEE-CSSCEEEEEECTTSSE-EEEEETTSCEEEEETTSS---------------
T ss_pred EEecCCcEEEEECCC------CceEeeec-CCCceEEEEECCCCCE-EEEEcCCCcEEEEECCCC---------------
Confidence 999999999999998 77777765 6788999999999996 568899999999999872
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
....+..|...|.+++|+|++.+++ +++.||.|++||+. .++.+. ...|...|.+++|+|
T Consensus 257 -~~~~~~~~~~~v~~~~~~~~~~~l~--------~~~~dg~i~~~~~~------~~~~~~-~~~~~~~v~~~~~s~ 316 (337)
T 1gxr_A 257 -DKYQLHLHESCVLSLKFAYCGKWFV--------STGKDNLLNAWRTP------YGASIF-QSKESSSVLSCDISV 316 (337)
T ss_dssp -CEEEECCCSSCEEEEEECTTSSEEE--------EEETTSEEEEEETT------TCCEEE-EEECSSCEEEEEECT
T ss_pred -CeEEEcCCccceeEEEECCCCCEEE--------EecCCCcEEEEECC------CCeEEE-EecCCCcEEEEEECC
Confidence 1235678899999999999888655 44445999999998 444443 345888999999987
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.4e-37 Score=261.68 Aligned_cols=260 Identities=23% Similarity=0.437 Sum_probs=209.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc-ccC--CccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS-ATD--PATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.+.+|.. .|++++|+|++++|++++.|+.|++||........ ... ............ .+..+..++.+++|+.
T Consensus 256 ~~~~~~~~-~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 256 QTLTGHSS-SVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNR 332 (577)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEET
T ss_pred EEEecCCC-CEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCC--EEEEEeCCCeEEEEeC
Confidence 46789998 89999999999999999999999999976542111 111 111111111111 2223345778899986
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.. ..+..+.+|...|.+++|+|++ .+|++++.||.|++||. +++ ....+.+|...|.+++|+| ++++|++++.|
T Consensus 333 ~~-~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~-~~~--~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d 406 (577)
T 2ymu_A 333 NG-QHLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNR-NGQ--LLQTLTGHSSSVRGVAFSP-DGQTIASASDD 406 (577)
T ss_dssp TS-CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEET-TCC--EEEEEECCSSCEEEEEECT-TSSCEEEEETT
T ss_pred CC-CeeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcC-CCC--EEEEecCCCCCeEEEEECC-CCCEEEEEeCC
Confidence 54 4456778899999999999998 88999999999999996 344 5777889999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.|++||.. ++.+..+.+|...|++++|+|+++. +++++.|+.|++||+.. ..+..
T Consensus 407 ~~v~~~~~~-------~~~~~~~~~~~~~v~~~~~s~d~~~-l~~~~~d~~v~~w~~~~----------------~~~~~ 462 (577)
T 2ymu_A 407 KTVKLWNRN-------GQLLQTLTGHSSSVWGVAFSPDDQT-IASASDDKTVKLWNRNG----------------QLLQT 462 (577)
T ss_dssp SEEEEECTT-------CCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTS----------------CEEEE
T ss_pred CEEEEEeCC-------CCEEEEecCCCCCeEEEEECCCCCE-EEEEcCCCEEEEEECCC----------------CEEEE
Confidence 999999953 6788899999999999999999995 67999999999999653 34567
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+.+|...|.+++|+|++.+++ ++ +.|+.|++||.. ++++.++.+|...|.+++|+|
T Consensus 463 ~~~~~~~v~~~~~spd~~~la-s~-------~~d~~i~iw~~~-------~~~~~~~~~h~~~v~~l~~s~ 518 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIA-SA-------SDDKTVKLWNRN-------GQLLQTLTGHSSSVRGVAFSP 518 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEE-EE-------ETTSEEEEEETT-------SCEEEEEECCSSCEEEEEECT
T ss_pred EcCCCCCEEEEEEcCCCCEEE-EE-------eCCCEEEEEcCC-------CCEEEEEeCCCCCEEEEEEcC
Confidence 788999999999999887654 44 445999999964 667888999999999999997
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-36 Score=241.45 Aligned_cols=245 Identities=18% Similarity=0.331 Sum_probs=193.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+.+|.. .|.+++|+|++++|++|+.||.|++||++++........ .......... ..+..+..++.+++|+
T Consensus 59 ~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 59 KTISGHKL-GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS--NLIVSGSFDESVRIWD 135 (312)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEEEE
T ss_pred hhhccCCC-ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEeCCCcEEEEE
Confidence 45788998 899999999999999999999999999987643322211 1111111111 2233455678999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE-eeccCCceeEEEeccCCCCeEEEEc
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV-EKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
..+.+.+..+..|..+|.+++|+|++ .+|++++.||.|++||+++++ .... ...+...+.+++|+| ++++|++++
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 211 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSP-NGKYILAAT 211 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECT-TSSEEEEEE
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCc--eeeEEeccCCCceEEEEECC-CCCEEEEEc
Confidence 99999999999999999999999998 789999999999999998877 3433 345667899999999 999999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeE--EEEe-cCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLC--VQWS-PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~-~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
.|+.|++||+++ ++.+..+.+|...... ..++ +++. ++++|+.||.|++||++. .
T Consensus 212 ~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~---------------~ 269 (312)
T 4ery_A 212 LDNTLKLWDYSK------GKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT---------------K 269 (312)
T ss_dssp TTTEEEEEETTT------TEEEEEECSSCCSSSCCCEEEECSSSC-EEEECCTTSCEEEEETTT---------------C
T ss_pred CCCeEEEEECCC------CcEEEEEEecCCceEEEEEEEEeCCCc-EEEEECCCCEEEEEECCC---------------c
Confidence 999999999998 8888888877655332 3444 4555 577999999999999987 4
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+..+.+|...|.+++|+|+++.++ +++ .+.|+.|++|+..
T Consensus 270 ~~~~~~~~h~~~v~~~~~~p~~~~l~-s~~-----~~~d~~i~~W~~d 311 (312)
T 4ery_A 270 EIVQKLQGHTDVVISTACHPTENIIA-SAA-----LENDKTIKLWKSD 311 (312)
T ss_dssp CEEEEECCCSSCEEEEEECSSSSEEE-EEE-----CTTTCCEEEEECC
T ss_pred hhhhhhhccCCcEEEEeecCcCCceE-EEE-----ccCCccEEEecCC
Confidence 56678889999999999999887655 332 1245999999975
No 50
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.3e-36 Score=246.16 Aligned_cols=263 Identities=20% Similarity=0.325 Sum_probs=198.0
Q ss_pred cccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+.+++|.+ .|++++|+| ++++|++|+.||.|++||+.+.............
T Consensus 37 ~~~~~h~~-~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~--------------------------- 88 (408)
T 4a11_B 37 DVERIHGG-GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVC--------------------------- 88 (408)
T ss_dssp EECCCCSS-CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEE---------------------------
T ss_pred eeeeccCC-cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccc---------------------------
Confidence 45788998 899999999 9999999999999999999865322211100000
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC--CCCeEEEEcCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL--DDNLILTGSAD 158 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d 158 (309)
........+|...|.+++|+|++..+|++++.||.|++||+.+++ ....+ .+...+.++.++|. ++.++++++.|
T Consensus 89 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (408)
T 4a11_B 89 SIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ--TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRG 165 (408)
T ss_dssp EECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE--EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESS
T ss_pred cccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc--cceec-cCCCceeeeEeecCCCCCcEEEEEcCC
Confidence 000112246899999999999555899999999999999998877 44444 47788999999883 22399999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc-CCCCceee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFF 237 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~ 237 (309)
|.|++||+++ ++.+..+..|...|.+++|+|++++++++++.||.|++||++............. ........
T Consensus 166 ~~v~~~d~~~------~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 239 (408)
T 4a11_B 166 PKVQLCDLKS------GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVES 239 (408)
T ss_dssp SSEEEEESSS------SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTT
T ss_pred CeEEEEeCCC------cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecc
Confidence 9999999998 8888999999999999999999998788999999999999987543322221111 11122233
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC-------------------------------
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR------------------------------- 286 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~------------------------------- 286 (309)
...+|...|.+++|+|++.+++ +++.||.|++||+......
T Consensus 240 ~~~~~~~~v~~~~~~~~~~~l~--------~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
T 4a11_B 240 ANTAHNGKVNGLCFTSDGLHLL--------TVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP 311 (408)
T ss_dssp SSCSCSSCEEEEEECTTSSEEE--------EEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE
T ss_pred ccccccCceeEEEEcCCCCEEE--------EecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe
Confidence 4467899999999999887655 4444588999998753211
Q ss_pred ----------ChhhHhHhhhcccceEEEeeeCC
Q 021657 287 ----------PQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 287 ----------~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+++++..+.+|.+.|.+++|+|
T Consensus 312 ~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~ 344 (408)
T 4a11_B 312 YGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS 344 (408)
T ss_dssp ETTEEEEEETTTCCEEEEECCCSSCEEEEEEET
T ss_pred cCCEEEEEECcCCcceeeeccCCCeEEEEEEcC
Confidence 23456677788999999999987
No 51
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-37 Score=275.61 Aligned_cols=267 Identities=20% Similarity=0.304 Sum_probs=219.1
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.|++|.+ .|++++|+|++++|++|+.||.|+|||+.++....... ............ .+..+..++.+.+|+
T Consensus 7 ~~~~~h~~-~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 7 KTFSNRSD-RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN--WIIVGSDDFRIRVFN 83 (814)
T ss_dssp EEEEEECS-CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT--EEEEEETTSEEEEEE
T ss_pred eeeecCCC-ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC--EEEEEeCCCeEEEEE
Confidence 57889999 89999999999999999999999999998764332221 111111112221 222334578999999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
..+.+.+..+.+|...|++++|+|++ .+|++++.||.|++||+.++. .....+.+|...|.+++|+|.++..+++++.
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999999998 789999999999999998763 2566778899999999999966789999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCC-CCeeEEEEec--CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHS-AAVLCVQWSP--DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
||.|++||++. +.....+..+. ..+.+++|+| ++.. +++++.||.|++||++. ..
T Consensus 162 dg~v~vwd~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~i~~~d~~~---------------~~ 219 (814)
T 3mkq_A 162 DRTVKVWSLGQ------STPNFTLTTGQERGVNYVDYYPLPDKPY-MITASDDLTIKIWDYQT---------------KS 219 (814)
T ss_dssp TSEEEEEETTC------SSCSEEEECCCTTCCCEEEECCSTTCCE-EEEECTTSEEEEEETTT---------------TE
T ss_pred CCeEEEEECCC------CcceeEEecCCCCCEEEEEEEECCCCCE-EEEEeCCCEEEEEECCC---------------Cc
Confidence 99999999988 66666665554 8899999999 8885 67999999999999987 34
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+..+.+|...|.+++|+|+++.++ +++.||.|++||+. +++.+..+..|...|.+++|+|
T Consensus 220 ~~~~~~~~~~~v~~~~~~~~~~~l~--------~~~~dg~v~vwd~~------~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 220 CVATLEGHMSNVSFAVFHPTLPIII--------SGSEDGTLKIWNSS------TYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEE--------EEETTSCEEEEETT------TCSEEEEECCSSSSEEEEEECT
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEE--------EEeCCCeEEEEECC------CCcEEEEeecCCCcEEEEEEcc
Confidence 5667788999999999999888655 44455999999998 6777888888999999999987
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-38 Score=259.06 Aligned_cols=264 Identities=16% Similarity=0.310 Sum_probs=207.2
Q ss_pred ceEEEEECCCCC-EEEEe----------cCCCcEEEEeCCccccc---cccC---CccccccCCCCceeecCCCCCCCCc
Q 021657 11 AEFALAMCPTEP-YVLSG----------GKDKSVVLWSIQDHITS---SATD---PATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 11 ~V~~~~~~~~~~-~l~t~----------~~dg~i~vwd~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
.|.+++|+|+++ +|++| +.|+.|+|||+.++... .... ............ .+..+..++.+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~v 91 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNK--IIAGALDNGSL 91 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSS--CEEEEESSSCE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCC--eEEEEccCCeE
Confidence 688999999987 99999 89999999999876421 1111 111111111111 22334457889
Q ss_pred ccCCCCC----cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC------cce-EEEeeccCCceeEE
Q 021657 74 KAADGPS----VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT------SPV-IKVEKAHDADLHCV 142 (309)
Q Consensus 74 ~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------~~~-~~~~~~~~~~v~~~ 142 (309)
.+|+... .+.+..+.+|...|++++|+|+++.+|++++.||.|++||+.+.+ ... ......|...|.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999887 457788889999999999999844899999999999999998765 211 22345788999999
Q ss_pred EeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC------CCCeeEEEEecCCCcEEEEecCCC---cEEEE
Q 021657 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH------SAAVLCVQWSPDKSSVFGSSAEDG---LLNIW 213 (309)
Q Consensus 143 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~dg---~i~iw 213 (309)
+|+|..+.+|++++.||.|++||+++ ++.+..+..+ ...|.+++|+|++..++++++.|+ .|++|
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKA------KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTT------TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCC------CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 99993378999999999999999998 7888888766 788999999999876788999998 99999
Q ss_pred eCCcccccccCCCCCcCCCCceeeeec-CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHh
Q 021657 214 DYEKVGKKVEQGPRTTNYPAGLFFQHA-GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVL 292 (309)
Q Consensus 214 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~ 292 (309)
|++.... ++..+. +|...|.+++|+|++..++++++.| |.|++||+. +++++
T Consensus 246 d~~~~~~--------------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-------g~v~~wd~~------~~~~~ 298 (416)
T 2pm9_A 246 DLRNANT--------------PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-------NTVLLWNPE------SAEQL 298 (416)
T ss_dssp ETTSTTS--------------CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-------SEEEEECSS------SCCEE
T ss_pred eCCCCCC--------------CcEEeecCccCceeEEEeCCCCCCeEEEEeCC-------CCEEEeeCC------CCccc
Confidence 9987322 234455 7999999999999444456655554 999999998 67788
Q ss_pred HhhhcccceEEEeeeCC
Q 021657 293 AELEKFKAHVISCTSKP 309 (309)
Q Consensus 293 ~~~~~h~~~v~~~~~~P 309 (309)
.++.+|.+.|.+++|+|
T Consensus 299 ~~~~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAP 315 (416)
T ss_dssp EEEECSSSCCCCEEECT
T ss_pred eeecCCCCceEEEEECC
Confidence 88999999999999987
No 53
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1e-36 Score=251.55 Aligned_cols=247 Identities=19% Similarity=0.381 Sum_probs=191.8
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc-C
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV-G 82 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 82 (309)
+.+|.+ .|++|+|+|+|++|++|+.||+|+|||++++......................+..+..++.+.+|+.... .
T Consensus 143 ~~~~~~-~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 143 MEQPGE-YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp CCSTTC-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred ecCCCC-cEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccce
Confidence 456777 89999999999999999999999999999875433322211110000011122334556777888877653 4
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc--ceEEEeeccCCceeEEEeccCCCCeEEE--EcCC
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKAHDADLHCVDWNPLDDNLILT--GSAD 158 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d 158 (309)
.+..+.+|...+..+.|+|++ .++++++.|+.+++|+...++. ........|...|.+++|+|.+..++++ |+.|
T Consensus 222 ~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 222 HVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 457788999999999999998 8899999999999999987653 2345667889999999999966667665 4579
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEE-ecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS-SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+.|++||+++ ++.+..+..+ ..+.++.|+|++..++++ |+.|+.|+|||+++ ..++.
T Consensus 301 ~~I~iwd~~t------~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~---------------~~~v~ 358 (420)
T 4gga_A 301 RHIRIWNVCS------GACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPT---------------MAKVA 358 (420)
T ss_dssp CEEEEEETTT------TEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTT---------------CCEEE
T ss_pred CEEEEEeCCc------cccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCC---------------CcEEE
Confidence 9999999998 8888888754 578899999999986644 34799999999987 45677
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+.+|...|++++|+|++.+++ ||+.|++|+|||+.+
T Consensus 359 ~l~gH~~~V~~l~~spdg~~l~--------S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 359 ELKGHTSRVLSLTMSPDGATVA--------SAAADETLRLWRCFE 395 (420)
T ss_dssp EECCCSSCEEEEEECTTSSCEE--------EEETTTEEEEECCSC
T ss_pred EEcCCCCCEEEEEEcCCCCEEE--------EEecCCeEEEEECCC
Confidence 8899999999999999988655 555559999999984
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.9e-38 Score=257.65 Aligned_cols=259 Identities=14% Similarity=0.143 Sum_probs=200.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcccc---ccCCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK---SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
.+++++|+|++++|++++.||.|++||+.+............. ...... ..+..+..++.+.+|+..+.+....+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQM--RRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSS--CEEEEEETTSCEEEECTTSCEEEEET
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCC--CEEEEEECCCCEEEEeCCCcceeeec
Confidence 3457899999999999999999999999876443333222111 111111 12333456789999999998888888
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
.+|...|++++|+|++ .+|++|+.|+.|++||+++++ ....+.+|...|.+++|+| ++.+|++++.||.|++||++
T Consensus 136 ~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGS--NPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp TSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--CCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETT
T ss_pred ccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc--CceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECC
Confidence 9999999999999998 789999999999999999887 5677789999999999999 99999999999999999999
Q ss_pred CCCCCCCCCceeeecc---CCCCeeE---------------------EEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 168 NLTSNGVGSPINKFEG---HSAAVLC---------------------VQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~---~~~~v~~---------------------~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
+ ++.+..+.. +...+.+ ++|+|++++ +++++.||.|++||++....
T Consensus 212 ~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~i~d~~~~~~--- 281 (420)
T 3vl1_A 212 T------GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY-VIAGHVSGVITVHNVFSKEQ--- 281 (420)
T ss_dssp T------TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE-EEEEETTSCEEEEETTTCCE---
T ss_pred C------CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE-EEEEcCCCeEEEEECCCCce---
Confidence 8 777777764 3334444 455778885 67999999999999987221
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc-ccceE
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK-FKAHV 302 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-h~~~v 302 (309)
.......|...|.+++|+|++..++++++.| |.|++||+.. ...++..+.. |...|
T Consensus 282 -----------~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-------g~i~vwd~~~-----~~~~~~~~~~~~~~~v 338 (420)
T 3vl1_A 282 -----------TIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-------GMLAQWDLRS-----PECPVGEFLINEGTPI 338 (420)
T ss_dssp -----------EEEECCTTSSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTC-----TTSCSEEEEESTTSCE
T ss_pred -----------eEEcccccCCCceeEEEeCCCCCEEEEEeCC-------CeEEEEEcCC-----CcCchhhhhccCCCCc
Confidence 1222346888999999999998566655555 9999999983 2234666766 56778
Q ss_pred EEeeeC
Q 021657 303 ISCTSK 308 (309)
Q Consensus 303 ~~~~~~ 308 (309)
.++.|.
T Consensus 339 ~~~~~~ 344 (420)
T 3vl1_A 339 NNVYFA 344 (420)
T ss_dssp EEEEEE
T ss_pred eEEEeC
Confidence 887664
No 55
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=245.03 Aligned_cols=232 Identities=20% Similarity=0.345 Sum_probs=183.1
Q ss_pred cccCCCCCcceEEEEECCC---CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPT---EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~---~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.+++|.+ .|++++|+|+ |++|++|+.||.|+|||+.+.
T Consensus 33 ~~~~~h~~-~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~------------------------------------- 74 (368)
T 3mmy_A 33 EVTSSPDD-SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS------------------------------------- 74 (368)
T ss_dssp ECSSCCSS-CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT-------------------------------------
T ss_pred EeccCCCC-ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC-------------------------------------
Confidence 56889999 8999999999 699999999999999999741
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEe--ccCCCCeEEEEc
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDW--NPLDDNLILTGS 156 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~ 156 (309)
.......+.+|...|++++|+|++ .+|++++.||.|++||+++++ . .....|...|.+++| +| ++.+|++++
T Consensus 75 -~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~--~-~~~~~~~~~v~~~~~~~~~-~~~~l~~~~ 148 (368)
T 3mmy_A 75 -GQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSSNQ--A-IQIAQHDAPVKTIHWIKAP-NYSCVMTGS 148 (368)
T ss_dssp -SCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--E-EEEEECSSCEEEEEEEECS-SCEEEEEEE
T ss_pred -CceeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCCCC--c-eeeccccCceEEEEEEeCC-CCCEEEEcc
Confidence 111225667899999999999988 889999999999999998776 3 335679999999999 88 889999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCC-----------------------------------------CCeeEEEEec
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHS-----------------------------------------AAVLCVQWSP 195 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~v~~~~~~~ 195 (309)
.||.|++||+++ ++.+..+..+. ..+.++++.+
T Consensus 149 ~dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (368)
T 3mmy_A 149 WDKTLKFWDTRS------SNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK 222 (368)
T ss_dssp TTSEEEEECSSC------SSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE
T ss_pred CCCcEEEEECCC------CcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc
Confidence 999999999998 55555554332 2334455544
Q ss_pred CCCc---EEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc------------ceeeEEEccCCCeEEE
Q 021657 196 DKSS---VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD------------KVVDFHWNASDPWTVV 260 (309)
Q Consensus 196 ~~~~---l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~~~~ 260 (309)
+... .+++++.||.|++||++.... ......+.+|.. +|.+++|+|++.+++
T Consensus 223 ~~~~~~~~~~~~~~dg~i~i~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~- 289 (368)
T 3mmy_A 223 DKQNKPTGFALGSIEGRVAIHYINPPNP------------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA- 289 (368)
T ss_dssp CTTSCEEEEEEEETTSEEEEEESSCSCH------------HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEE-
T ss_pred cCCCCCCeEEEecCCCcEEEEecCCCCc------------cccceeeeeeecccccccccccccceEEEEEecCCCEEE-
Confidence 4332 256888888999998876321 123445555554 799999999887655
Q ss_pred EecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 261 SVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 261 s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+|+.||.|++||+. +++++..+.+|..+|.+++|+|
T Consensus 290 -------s~~~dg~i~iwd~~------~~~~~~~~~~~~~~v~~~~~s~ 325 (368)
T 3mmy_A 290 -------TVGSDGRFSFWDKD------ARTKLKTSEQLDQPISACCFNH 325 (368)
T ss_dssp -------EEETTSCEEEEETT------TTEEEEECCCCSSCEEEEEECT
T ss_pred -------EEccCCeEEEEECC------CCcEEEEecCCCCCceEEEECC
Confidence 44555999999999 7888899999999999999997
No 56
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=240.84 Aligned_cols=257 Identities=20% Similarity=0.242 Sum_probs=202.8
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.|++|.+ .|++++| |++++|++|+.||.|++||+.+........ ............ .+..+..++.+.+|+
T Consensus 12 ~~l~~h~~-~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 12 ATLKGHDQ-DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE--LLLFGGKDTMINGVP 87 (313)
T ss_dssp EEECCCSS-CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT--EEEEEETTSCEEEEE
T ss_pred HHhhCCCC-CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC--EEEEecCCCeEEEEE
Confidence 57899999 8999999 999999999999999999998763222211 111111111111 222234466666555
Q ss_pred C---CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 78 G---PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 78 ~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
. ...+....+.+|...|.++.|. + .+|++++.||.|++|| ..+ ....+..|...+.+++|.|.+++.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGS--LVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTE--EEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred eeecCCCCcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCc--EEEecccCCCceeEEEEccCCCCEEEE
Confidence 4 4446677888999999999993 4 6899999999999999 333 567778899999999998878899999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeecc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
++.||.|++||. .+.+..+.. +...+.+++|+|++. +++++.||.|++||++. .
T Consensus 161 ~~~d~~i~i~d~--------~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~---------------~ 215 (313)
T 3odt_A 161 ASADKTIKLWQN--------DKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHT---------------G 215 (313)
T ss_dssp EETTSCEEEEET--------TEEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTT---------------C
T ss_pred EECCCCEEEEec--------CceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCc---------------h
Confidence 999999999993 456677776 889999999999998 46899999999999987 4
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+..+.+|...|.+++|+|++ . +++++ .||.|++||+. +++++..+..|...|.+++|+|
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~-------~dg~v~iwd~~------~~~~~~~~~~~~~~i~~~~~~~ 276 (313)
T 3odt_A 216 DVLRTYEGHESFVYCIKLLPNG-D-IVSCG-------EDRTVRIWSKE------NGSLKQVITLPAISIWSVDCMS 276 (313)
T ss_dssp CEEEEEECCSSCEEEEEECTTS-C-EEEEE-------TTSEEEEECTT------TCCEEEEEECSSSCEEEEEECT
T ss_pred hhhhhhhcCCceEEEEEEecCC-C-EEEEe-------cCCEEEEEECC------CCceeEEEeccCceEEEEEEcc
Confidence 4567778899999999999988 4 44444 44999999999 6778888899999999999987
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-36 Score=248.30 Aligned_cols=239 Identities=18% Similarity=0.336 Sum_probs=191.3
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCCCC-Cc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAADGP-SV 81 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 81 (309)
|.+ .|++++|+|++++|++|+.||.|++||+.++......... ..... . ...+..+..++.+.+|+.. ..
T Consensus 133 ~~~-~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~i~d~~~~~ 207 (401)
T 4aez_A 133 EST-YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--N--RHVLSSGSRSGAIHHHDVRIAN 207 (401)
T ss_dssp TTC-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--E--TTEEEEEETTSEEEEEETTSSS
T ss_pred CCC-CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--C--CCEEEEEcCCCCEEEEecccCc
Confidence 666 8999999999999999999999999999876433322211 11111 1 1233445667899999998 45
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc--CCC
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS--ADN 159 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg 159 (309)
.....+.+|...|.+++|+|++ .+|++|+.||.|++||+++++ ....+..|...|.+++|+|....++++++ .|+
T Consensus 208 ~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 208 HQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSI--PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSS--EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred ceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCC--ccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 6677888999999999999988 889999999999999999877 67777889999999999994446677765 799
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEE-ecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS-SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.|++||+++ ++++..+. +...|.+++|+|+++.++++ |+.||.|++||++... ......
T Consensus 285 ~i~i~d~~~------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~-------------~~~~~~ 344 (401)
T 4aez_A 285 QIHFWNAAT------GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG-------------LTKQVD 344 (401)
T ss_dssp EEEEEETTT------CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE-------------EEEEEE
T ss_pred EEEEEECCC------CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc-------------ceeEEE
Confidence 999999998 88888886 56789999999999975533 5589999999998621 123445
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.+|...|.+++|+|++.+++ +++.||.|++|++.
T Consensus 345 ~~~h~~~v~~~~~s~dg~~l~--------s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 345 IPAHDTRVLYSALSPDGRILS--------TAASDENLKFWRVY 379 (401)
T ss_dssp EECCSSCCCEEEECTTSSEEE--------EECTTSEEEEEECC
T ss_pred ecCCCCCEEEEEECCCCCEEE--------EEeCCCcEEEEECC
Confidence 678999999999999888665 55566999999998
No 58
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-36 Score=244.96 Aligned_cols=274 Identities=14% Similarity=0.173 Sum_probs=212.5
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
..|++|.+ .|++++|+|++++|++|+.||.|++||+.++........ ........... .+..+..++.+.+|+
T Consensus 26 ~~l~~h~~-~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 26 IKLTGHER-PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK--YCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEECCSS-CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS--EEEEEETTTEEEEEE
T ss_pred EEEEEeec-eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCC--EEEEEeCCCeEEEEE
Confidence 35889999 899999999999999999999999999987744333221 11111111111 223345578899999
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCC-----CeEEEEEcCCCCcc---------eEEEeeccCC--ceeE
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDD-----SCLILWDARVGTSP---------VIKVEKAHDA--DLHC 141 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~---------~~~~~~~~~~--~v~~ 141 (309)
..+.+.+..+. +...|.+++|+|++ .+|++++.+ |.|++||+...... ....+..|.. .+.+
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 99998888777 88899999999998 789999888 99999999765421 2233445555 8999
Q ss_pred EEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccc
Q 021657 142 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 221 (309)
Q Consensus 142 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~ 221 (309)
++|+| ++++|++++.||.|++||+++. .+.+..+..|...|.+++|+|++.+ |++++.|+.|++||++.
T Consensus 181 ~~~~~-~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~v~d~~~---- 249 (369)
T 3zwl_B 181 AGWST-KGKYIIAGHKDGKISKYDVSNN-----YEYVDSIDLHEKSISDMQFSPDLTY-FITSSRDTNSFLVDVST---- 249 (369)
T ss_dssp EEECG-GGCEEEEEETTSEEEEEETTTT-----TEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTT----
T ss_pred EEEcC-CCCEEEEEcCCCEEEEEECCCC-----cEeEEEEecCCCceeEEEECCCCCE-EEEecCCceEEEEECCC----
Confidence 99999 9999999999999999999873 4677888889999999999999996 56899999999999987
Q ss_pred ccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCC------CCCCCCeEEEEEccccccCChhhHhHhh
Q 021657 222 VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCD------STGGGGTLQIWRMSDLIYRPQDEVLAEL 295 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~------s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 295 (309)
...+..+. +...+..++|+|++.+++++++++.. .......+++||+. .++++..+
T Consensus 250 -----------~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~------~~~~~~~~ 311 (369)
T 3zwl_B 250 -----------LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI------FEEEIGRV 311 (369)
T ss_dssp -----------CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT------TCCEEEEE
T ss_pred -----------Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC------CCcchhhe
Confidence 23333444 77889999999999887754433200 00111189999998 67788889
Q ss_pred hcccceEEEeeeCC
Q 021657 296 EKFKAHVISCTSKP 309 (309)
Q Consensus 296 ~~h~~~v~~~~~~P 309 (309)
.+|.+.|.+++|+|
T Consensus 312 ~~~~~~v~~~~~s~ 325 (369)
T 3zwl_B 312 QGHFGPLNTVAISP 325 (369)
T ss_dssp ECCSSCEEEEEECT
T ss_pred ecccCcEEEEEECC
Confidence 99999999999987
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=247.16 Aligned_cols=278 Identities=15% Similarity=0.206 Sum_probs=204.8
Q ss_pred ccCCCCCcceEEEEECCCCCEE-EEecC---CCcEEEEeCCcccccccc-----CCccccccCCCC-ceeecCCCCCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYV-LSGGK---DKSVVLWSIQDHITSSAT-----DPATAKSAGSSG-SIIKQSPKPGDGN 72 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l-~t~~~---dg~i~vwd~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~ 72 (309)
.+++|.+ .|++++|+|++..+ ++|+. ||.|+|||+.++...... ............ ....+..+..++.
T Consensus 13 ~~~~h~~-~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 13 IQKGFNY-TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEECSS-CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hccCCCC-ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 4578998 89999999998655 56666 999999999876432111 111111122110 0122333456789
Q ss_pred cccCCCCCcC-cccccccccCCeEEEEE------ecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCC----ceeE
Q 021657 73 DKAADGPSVG-PRGIYNGHEDTVEDVTF------CPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA----DLHC 141 (309)
Q Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~v~~ 141 (309)
+.+|+..+.+ .+..+.+|...|.++.| +|++ .+|++++.||.|++||+++++. ....+..|.. .+.+
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDD-PVANMEPVQGENKRDCWT 169 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSS-CSEEECCCTTSCCCCEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCC-cceeccccCCCCCCceEE
Confidence 9999999888 88889999999999965 5677 7899999999999999987763 2344444433 7889
Q ss_pred EE----eccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEec---CCCcEEEEecCCCcEEEEe
Q 021657 142 VD----WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP---DKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 142 ~~----~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~dg~i~iwd 214 (309)
++ |+| +++++++++.||.|++||+++ ++... ...+...|.+++|+| ++.. +++++.||.|++||
T Consensus 170 ~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~------~~~~~-~~~~~~~v~~~~~~~~~~~~~~-l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 170 VAFGNAYNQ-EERVVCAGYDNGDIKLFDLRN------MALRW-ETNIKNGVCSLEFDRKDISMNK-LVATSLEGKFHVFD 240 (357)
T ss_dssp EEEECCCC--CCCEEEEEETTSEEEEEETTT------TEEEE-EEECSSCEEEEEESCSSSSCCE-EEEEESTTEEEEEE
T ss_pred EEEEeccCC-CCCEEEEEccCCeEEEEECcc------Cceee-ecCCCCceEEEEcCCCCCCCCE-EEEECCCCeEEEEe
Confidence 98 788 999999999999999999998 55544 455788999999999 8885 56899999999999
Q ss_pred CCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC-------
Q 021657 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP------- 287 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~------- 287 (309)
++...... ........+|...|.+++|+|++..++++++.| |.|++||+.......
T Consensus 241 ~~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~g~ 303 (357)
T 3i2n_A 241 MRTQHPTK----------GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA-------GGLHLWKYEYPIQRSKKDSEGI 303 (357)
T ss_dssp EEEEETTT----------EEEEEEEECCSSCEEEEEEETTEEEEEEEEETT-------SEEEEEEEECCSCC--CCTTSC
T ss_pred CcCCCccc----------ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC-------CcEEEeecCCCcccccccCCCC
Confidence 98722211 011223458999999999999888677766655 999999998532111
Q ss_pred ------hhhHhHhhhcccceEEEeeeCC
Q 021657 288 ------QDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 288 ------~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+.+++..+.+|.++|.+++|+|
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 331 (357)
T 3i2n_A 304 EMGVAGSVSLLQNVTLSTQPISSLDWSP 331 (357)
T ss_dssp CCCCCCEEEEEEEEECCSSCEEEEEECS
T ss_pred ccccccccceeeccccCCCCeeEEEEcC
Confidence 1146677889999999999987
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.9e-37 Score=245.21 Aligned_cols=218 Identities=21% Similarity=0.361 Sum_probs=171.0
Q ss_pred cccCCCCCcceEEEEECC--CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCP--TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
..|++|.+ +|++++|+| ++++|++|+.|++|++||++++
T Consensus 51 ~~l~gH~~-~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~-------------------------------------- 91 (316)
T 3bg1_A 51 ADLRGHEG-PVWQVAWAHPMYGNILASCSYDRKVIIWREENG-------------------------------------- 91 (316)
T ss_dssp EEEECCSS-CEEEEEECCGGGSSCEEEEETTSCEEEECCSSS--------------------------------------
T ss_pred EEEcCCCc-cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC--------------------------------------
Confidence 46889999 899999986 4899999999999999998742
Q ss_pred CcCcccccccccCCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCc-ceEEEeeccCCceeEEEeccCC---------
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTS-PVIKVEKAHDADLHCVDWNPLD--------- 148 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~--------- 148 (309)
.......+.+|...|++++|+|++ ..+|++|+.|+.|++||++.... .....+.+|...|.+++|+| +
T Consensus 92 ~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~ 170 (316)
T 3bg1_A 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP-AVVPGSLIDH 170 (316)
T ss_dssp CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC-CCCC------
T ss_pred cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc-ccCCcccccc
Confidence 112334567899999999999982 27899999999999999987532 12345568889999999999 5
Q ss_pred --------CCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCC---CcEEEEecCCCcEEEEeCCc
Q 021657 149 --------DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK---SSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 149 --------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~~dg~i~iwd~~~ 217 (309)
+.+|++|+.|+.|++||++.... .+++..+.+|...|++++|+|++ ..+|++++.|++|++|+++.
T Consensus 171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ---WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCSCCCCCCCBEECCBTTSBCCEEEECTTSC---EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ccccCccccceEEEecCCCeEEEEEeCCCCc---cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 46899999999999999975210 14677888999999999999986 23578999999999999876
Q ss_pred ccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 218 VGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..... .....+..|...|.+++|+|++..++ +|+.|+.|++|+..
T Consensus 248 ~~~~~-----------~~~~~~~~~~~~v~~v~~sp~g~~la--------s~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 248 ASSNT-----------WSPKLLHKFNDVVWHVSWSITANILA--------VSGGDNKVTLWKES 292 (316)
T ss_dssp TTCCC-----------CBCCEEEECSSCEEEEEECTTTCCEE--------EEESSSCEEEEEEC
T ss_pred ccccc-----------hhhhhhhcCCCcEEEEEEcCCCCEEE--------EEcCCCeEEEEEEC
Confidence 21100 01122356888999999999887655 44445999999986
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=250.26 Aligned_cols=259 Identities=14% Similarity=0.211 Sum_probs=206.5
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccc-cc--cCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITS-SA--TDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
+|.+ .|++++|+|++++|++|+.||.|++||....... .. .............. .+..+..++.+.+|+..+.+
T Consensus 106 ~~~~-~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 106 KTTN-QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGT--HIISMDVENVTILWNVISGT 182 (425)
T ss_dssp --CB-CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSS--EEEEEETTCCEEEEETTTTE
T ss_pred CCCC-ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCC--EEEEEecCCeEEEEECCCCc
Confidence 3676 8999999999999999999999999994433111 11 11111112222221 12233457889999999988
Q ss_pred cccccccccCC---------------eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC
Q 021657 83 PRGIYNGHEDT---------------VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 147 (309)
Q Consensus 83 ~~~~~~~~~~~---------------v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 147 (309)
.+..+..+... +.++.|+|++ .+++++.||.|++||+.+++ ....+..|...|.+++|+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~- 257 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKT--PTGKLIGHHGPISVLEFND- 257 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSS--CSEEECCCSSCEEEEEEET-
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCc--eeeeeccCCCceEEEEECC-
Confidence 88888877776 9999999975 58899999999999999877 5667778999999999999
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 148 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
++++|++++.|+.|++||+++ ++.+..+..|...|.+++|+|++ ++++++.|+.|++||++.
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~---------- 319 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGN------GNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ---------- 319 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSS------BSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT----------
T ss_pred CCCEEEEEcCCCEEEEEECCC------CccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC----------
Confidence 999999999999999999998 78888898899999999999999 467999999999999987
Q ss_pred CcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhh-----------------
Q 021657 228 TTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDE----------------- 290 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~----------------- 290 (309)
...+..+..|...|.+++|+|++..++ +++.||.|++||+. ..+
T Consensus 320 -----~~~~~~~~~~~~~i~~~~~s~~~~~l~--------~~~~dg~i~i~~~~------~~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 320 -----NTLLALSIVDGVPIFAGRISQDGQKYA--------VAFMDGQVNVYDLK------KLNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp -----TEEEEEEECTTCCEEEEEECTTSSEEE--------EEETTSCEEEEECH------HHHC--------------CE
T ss_pred -----CcEeEecccCCccEEEEEEcCCCCEEE--------EEECCCeEEEEECC------CCccceeeeecccccccCcc
Confidence 345667778999999999999887655 44445999999998 566
Q ss_pred ---HhHhhhcccc--eEEEeeeCC
Q 021657 291 ---VLAELEKFKA--HVISCTSKP 309 (309)
Q Consensus 291 ---~~~~~~~h~~--~v~~~~~~P 309 (309)
++..+.+|.. .|.+++|+|
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECT
T ss_pred cchhhhhhcCcccCCceEEEEccC
Confidence 7788888976 999999987
No 62
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-35 Score=242.40 Aligned_cols=243 Identities=19% Similarity=0.309 Sum_probs=186.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC----ccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
.|++++|+|++++|++|+.||.|+|||++++........ ........... .+..+..++.+++|+..+.+....
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~--~l~s~s~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD--KLVSGSGDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC--EEEEecCCCcEEEEECCCCeeEEE
Confidence 499999999999999999999999999987643322211 11111111111 233455688999999988877666
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe-------eccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-------KAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
+. +...+.+++|+|.++.+|++|+.|+.|++||+++++ ....+ .+|...|.+++|+| ++++|++|+.|+
T Consensus 203 ~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~ 278 (393)
T 1erj_A 203 LS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF--LVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDR 278 (393)
T ss_dssp EE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC--EEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred EE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc--EEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCC
Confidence 54 567799999999433899999999999999998877 44433 57889999999999 999999999999
Q ss_pred cEEEEecCCCCCC------CCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 160 SVRMFDRRNLTSN------GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 160 ~i~i~d~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
.|++||+++.... ..+.....+.+|...|.+++|+|++.+ +++|+.|+.|++||++. .
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~iwd~~~---------------~ 342 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKKS---------------G 342 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE-EEEEETTSEEEEEETTT---------------C
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCE-EEEEeCCCeEEEEECCC---------------C
Confidence 9999999863210 013445677889999999999999996 57999999999999987 4
Q ss_pred ceeeeecCCCcceeeEEEccC-----CCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 234 GLFFQHAGHRDKVVDFHWNAS-----DPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~-----~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+..+.+|...|.+++|++. ...+++++|.| |+|++|++..
T Consensus 343 ~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~D-------g~i~iW~~~~ 389 (393)
T 1erj_A 343 NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD-------CKARIWKYKK 389 (393)
T ss_dssp CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT-------SEEEEEEEEE
T ss_pred eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCC-------CcEEECcccc
Confidence 456778899999999999873 23466655555 9999999973
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-37 Score=258.05 Aligned_cols=257 Identities=12% Similarity=0.233 Sum_probs=181.5
Q ss_pred ccc-CCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCcccccc------c---cCCccccccCCCCceeecCCCCCC
Q 021657 2 EIL-TGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSS------A---TDPATAKSAGSSGSIIKQSPKPGD 70 (309)
Q Consensus 2 ~~l-~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~ 70 (309)
+.| ++|.+ .|++++|+| ++++|++|+.||+|+|||+.+..... . ............ ...+..+..+
T Consensus 56 ~~~~~~h~~-~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~d 132 (437)
T 3gre_A 56 ATLMENEPN-SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPN--FDAFAVSSKD 132 (437)
T ss_dssp EEECTTTTS-CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTT--SSEEEEEETT
T ss_pred eeeccCCCC-ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCC--CCEEEEEeCC
Confidence 345 88888 899999999 99999999999999999997621111 1 111111111111 1123344567
Q ss_pred CCcccCCCC---CcCccccccc------------ccCCeEEEE--EecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee
Q 021657 71 GNDKAADGP---SVGPRGIYNG------------HEDTVEDVT--FCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK 133 (309)
Q Consensus 71 ~~~~~~~~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 133 (309)
+.+.+|+.. ..+....+.. +...+.++. +++++ .+|++|+.||.|++||+++++ ....+.
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~--~~~~~~ 209 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLE--RLQIIE 209 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCC--EEEEEE
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCe--eeEEEc
Confidence 889999874 3333332222 445666666 44666 899999999999999999888 666776
Q ss_pred c--cCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec-cCCCCeeEEEEec----CCCcEEEEecC
Q 021657 134 A--HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE-GHSAAVLCVQWSP----DKSSVFGSSAE 206 (309)
Q Consensus 134 ~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~l~~~~~~ 206 (309)
. |...|++++|+| ++.+|++|+.||.|++||+++ ++++..+. .|...|++++|+| ++. ++++|+.
T Consensus 210 ~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~ 281 (437)
T 3gre_A 210 NSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRF------NVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSS 281 (437)
T ss_dssp CCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTT------TEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEEEST
T ss_pred cCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCC------ccEEEEEecCCCCceEEEEeccccCCCcc-EEEEEcC
Confidence 6 889999999999 899999999999999999998 88888875 6778999997765 465 5779999
Q ss_pred CCcEEEEeCCcccccccCCCCCcCCCCcee----------eeecC--CCcceeeEEEccCCCeEEEEecCCCCCCCCCCe
Q 021657 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLF----------FQHAG--HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGT 274 (309)
Q Consensus 207 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~ 274 (309)
||.|++||++......... .......... ..+.+ |...|++++|+ ++ .++++++.| +.
T Consensus 282 dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d-------~~ 351 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFI-NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEAT-------SS 351 (437)
T ss_dssp TEEEEEEETTTTEEEEEEE-SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGG-------TE
T ss_pred CCcEEEEEcCCCcEEEEEE-cCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCC-------Ce
Confidence 9999999998733221111 0000000000 11233 88899999999 45 456655555 99
Q ss_pred EEEEEccc
Q 021657 275 LQIWRMSD 282 (309)
Q Consensus 275 v~vw~~~~ 282 (309)
|++||+..
T Consensus 352 i~~wd~~~ 359 (437)
T 3gre_A 352 IVMFSLNE 359 (437)
T ss_dssp EEEEETTC
T ss_pred EEEEECCC
Confidence 99999983
No 64
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-36 Score=265.73 Aligned_cols=244 Identities=22% Similarity=0.349 Sum_probs=193.8
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+++++||.+ +|++++|+|++++|++|+.||.|+|||+.+. +
T Consensus 2 ~~~l~gH~~-~V~~l~~s~dg~~latg~~dg~I~vwd~~~~--------------------------------------~ 42 (753)
T 3jro_A 2 VVIANAHNE-LIHDAVLDYYGKRLATCSSDKTIKIFEVEGE--------------------------------------T 42 (753)
T ss_dssp ------CCC-CEEEECCCSSSCCEEEEETTTEEEEEEEETT--------------------------------------E
T ss_pred eeecccCcc-eeEEEEECCCCCeEEEEECCCcEEEEecCCC--------------------------------------C
Confidence 357899999 8999999999999999999999999998632 2
Q ss_pred cCcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC--CCeEEEEc
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD--DNLILTGS 156 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~ 156 (309)
......+.+|.+.|++++|+|+ + .+|++|+.||.|++||+.+++......+..|...|.+++|+| + +..+++|+
T Consensus 43 ~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs 120 (753)
T 3jro_A 43 HKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVAS 120 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEE
T ss_pred CccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECC-CCCCCEEEEEe
Confidence 3345667889999999999987 6 889999999999999999876446677788999999999999 7 89999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEec-------------CCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-------------DKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
.||.|++||+++.. ......+..|...|.+++|+| ++.. +++|+.||.|++||++.....
T Consensus 121 ~dg~I~vwdl~~~~----~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~-l~sgs~dg~I~iwd~~~~~~~-- 193 (753)
T 3jro_A 121 SDGKVSVVEFKENG----TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK-FVTGGADNLVKIWKYNSDAQT-- 193 (753)
T ss_dssp TTSEEEEEECCSSS----CCCCEEEECCSSCEEEEEECCCC---------CGGGCC-EEEEETTSCEEEEEEETTTTE--
T ss_pred CCCcEEEEEeecCC----CcceeEeecCCCceEEEEecCcccccccccccCCCCCE-EEEEECCCeEEEEeccCCccc--
Confidence 99999999999832 234556678899999999999 4675 679999999999999873221
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCC--CeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccce
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASD--PWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAH 301 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~ 301 (309)
......+.+|...|++++|+|++ ..++++++.| |.|++||+...... ....+.....|.+.
T Consensus 194 ---------~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D-------g~I~iwd~~~~~~~-~~~~~~~~~~~~~~ 256 (753)
T 3jro_A 194 ---------YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-------RTCIIWTQDNEQGP-WKKTLLKEEKFPDV 256 (753)
T ss_dssp ---------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS-------SCEEEEEESSSSSC-CBCCBSSSSCCSSC
T ss_pred ---------ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC-------CEEEEecCCCCCCc-ceeEEeccCCCCCc
Confidence 23556778999999999999984 4566655555 99999999842111 01234445668899
Q ss_pred EEEeeeCC
Q 021657 302 VISCTSKP 309 (309)
Q Consensus 302 v~~~~~~P 309 (309)
|++++|+|
T Consensus 257 v~~l~~sp 264 (753)
T 3jro_A 257 LWRASWSL 264 (753)
T ss_dssp CCCEEECT
T ss_pred eEEEEEcC
Confidence 99999987
No 65
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-35 Score=239.75 Aligned_cols=205 Identities=10% Similarity=0.105 Sum_probs=160.3
Q ss_pred CCCcceEEEEECCCCCEEE--EecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 7 HQDNAEFALAMCPTEPYVL--SGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~--t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
+.. .+.+++|+|||++|+ +++.|++|+|||+++. +.+
T Consensus 132 ~~~-~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~----------------------------------------~~~ 170 (365)
T 4h5i_A 132 ADD-YTKLVYISREGTVAAIASSKVPAIMRIIDPSDL----------------------------------------TEK 170 (365)
T ss_dssp TTC-CEEEEEECTTSSCEEEEESCSSCEEEEEETTTT----------------------------------------EEE
T ss_pred ccc-CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC----------------------------------------cEE
Confidence 344 588999999999976 4557999999999743 223
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC----c
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN----S 160 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~ 160 (309)
..+ .|...|.+++|+|+| .++++++.+ .+++|+..+++.........|...|.+++|+| ++.++++++.|+ .
T Consensus 171 ~~~-~~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 171 FEI-ETRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA-DDTVLIAASLKKGKGIV 246 (365)
T ss_dssp EEE-ECSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEE
T ss_pred EEe-CCCCceEEEEEccCC-ceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC-CCCEEEEEecCCcceeE
Confidence 333 377889999999999 888888755 56777777776434445567888999999999 999999998887 6
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee-e
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ-H 239 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (309)
+++||+...... ......+.+|...|++++|+|+|++ ||+|+.|+.|+|||+++ .+++.. +
T Consensus 247 i~~~~~~~~~~~--~~~~~~~~~~~~~V~~~~~Spdg~~-lasgs~D~~V~iwd~~~---------------~~~~~~~~ 308 (365)
T 4h5i_A 247 LTKISIKSGNTS--VLRSKQVTNRFKGITSMDVDMKGEL-AVLASNDNSIALVKLKD---------------LSMSKIFK 308 (365)
T ss_dssp EEEEEEETTEEE--EEEEEEEESSCSCEEEEEECTTSCE-EEEEETTSCEEEEETTT---------------TEEEEEET
T ss_pred Eeecccccceec--ceeeeeecCCCCCeEeEEECCCCCc-eEEEcCCCEEEEEECCC---------------CcEEEEec
Confidence 888998762100 1123566788899999999999995 78999999999999987 344555 4
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+|..+|++++|+|++.+ ++++| .|++|+||++..
T Consensus 309 ~gH~~~V~~v~fSpdg~~-laS~S-------~D~tvrvw~ip~ 343 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTY-VASVS-------AANTIHIIKLPL 343 (365)
T ss_dssp TSSSSCEEEEEECTTSCE-EEEEE-------TTSEEEEEECCT
T ss_pred CcccCCEEEEEECCCCCE-EEEEe-------CCCeEEEEEcCC
Confidence 789999999999998876 45455 459999999964
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.4e-36 Score=246.45 Aligned_cols=234 Identities=15% Similarity=0.196 Sum_probs=181.8
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+++|.+ .|++++|+|++++|++|+.||.|++||+.+ .
T Consensus 133 ~~~~~h~~-~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~----------------------------------------~ 171 (420)
T 3vl1_A 133 EIDQAHVS-EITKLKFFPSGEALISSSQDMQLKIWSVKD----------------------------------------G 171 (420)
T ss_dssp EETTSSSS-CEEEEEECTTSSEEEEEETTSEEEEEETTT----------------------------------------C
T ss_pred eecccccC-ccEEEEECCCCCEEEEEeCCCeEEEEeCCC----------------------------------------C
Confidence 35679998 899999999999999999999999999974 2
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec---c---------------------CC
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA---H---------------------DA 137 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~---------------------~~ 137 (309)
+.+..+.+|...|.+++|+|++ .+|++++.||.|++||+++++ ....+.. + ..
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGT--TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTE--EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCc--eeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 3445677899999999999998 889999999999999998876 4555543 2 34
Q ss_pred ceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 138 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
.+.+++|+| ++++|++|+.||.|++||+++ ++.+..+. .|...|.+++|+|++..++++|+.||.|++||++
T Consensus 249 ~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 249 KKNNLEFGT-YGKYVIAGHVSGVITVHNVFS------KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp CCCTTCSSC-TTEEEEEEETTSCEEEEETTT------CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred cccceEEcC-CCCEEEEEcCCCeEEEEECCC------CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 556666788 899999999999999999998 66666664 4788999999999999557799999999999998
Q ss_pred cccccccCCCCCcCCCCceeeeecC-CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCCh---hhHh
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAG-HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQ---DEVL 292 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~---~~~~ 292 (309)
.... ++..+.. |...|..+.+. ++. ++++++ .|+.|++|++........ ....
T Consensus 322 ~~~~--------------~~~~~~~~~~~~v~~~~~~-~~~-~l~s~~-------~d~~v~iw~~~~~~~~~~~~~~~~~ 378 (420)
T 3vl1_A 322 SPEC--------------PVGEFLINEGTPINNVYFA-AGA-LFVSSG-------FDTSIKLDIISDPESERPAIEFETP 378 (420)
T ss_dssp CTTS--------------CSEEEEESTTSCEEEEEEE-TTE-EEEEET-------TTEEEEEEEECCTTCCSCEECTTSC
T ss_pred CCcC--------------chhhhhccCCCCceEEEeC-CCC-EEEEec-------CCccEEEEeccCCCCCccceeccCc
Confidence 7322 2334444 66788888665 454 556554 459999999985321100 1122
Q ss_pred HhhhcccceEEEeeeCC
Q 021657 293 AELEKFKAHVISCTSKP 309 (309)
Q Consensus 293 ~~~~~h~~~v~~~~~~P 309 (309)
..+.+|.+.|.+++|+|
T Consensus 379 ~~~~~~~~~v~~~~~s~ 395 (420)
T 3vl1_A 379 TFLVSNDDAVSQFCYVS 395 (420)
T ss_dssp EEECCSSCCCCEEEEEC
T ss_pred cEEccCCcceEEEEEcc
Confidence 23557888899999887
No 67
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.2e-35 Score=244.19 Aligned_cols=233 Identities=35% Similarity=0.719 Sum_probs=187.3
Q ss_pred cccCCCCCcceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
..+.+|.+ .|++++|+|++. +|++|+.||.|++||+........ .
T Consensus 175 ~~~~~h~~-~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~---------------------------------~ 220 (430)
T 2xyi_A 175 LRLRGHQK-EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR---------------------------------V 220 (430)
T ss_dssp EEEECCSS-CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG---------------------------------E
T ss_pred EEecCCCC-CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc---------------------------------e
Confidence 45778998 899999999988 999999999999999985311000 0
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC-cceEEEeeccCCceeEEEeccCCCC-eEEEEcCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDDN-LILTGSAD 158 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d 158 (309)
......+.+|...|.+++|+|++..+|++++.||.|++||+++.. ......+..|...|++++|+| ++. ++++|+.|
T Consensus 221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~~l~tg~~d 299 (430)
T 2xyi_A 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNP-YSEFILATGSAD 299 (430)
T ss_dssp EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECS-SCTTEEEEEETT
T ss_pred eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCC-CCCCEEEEEeCC
Confidence 112345668999999999999666899999999999999998763 124556678999999999999 665 79999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
|.|++||+++. ..++..+..|...|.+++|+|+++++|++++.|+.|++||++..+..... ......+..++..
T Consensus 300 g~v~vwd~~~~-----~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 373 (430)
T 2xyi_A 300 KTVALWDLRNL-----KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST-EDAEDGPPELLFI 373 (430)
T ss_dssp SEEEEEETTCT-----TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH-HHHHHCCTTEEEE
T ss_pred CeEEEEeCCCC-----CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc-cccccCCcceEEE
Confidence 99999999974 45788888899999999999999888899999999999999874322110 0001123457788
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.+|...|++++|+|++++++++++.| |.|++|++..
T Consensus 374 ~~~h~~~v~~~~~~p~~~~~l~s~s~d-------g~i~iw~~~~ 410 (430)
T 2xyi_A 374 HGGHTAKISDFSWNPNEPWIICSVSED-------NIMQVWQMAE 410 (430)
T ss_dssp CCCCSSCEEEEEECSSSTTEEEEEETT-------SEEEEEEECH
T ss_pred cCCCCCCceEEEECCCCCCEEEEEECC-------CCEEEeEccc
Confidence 889999999999999999778876666 9999999984
No 68
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.8e-35 Score=236.23 Aligned_cols=251 Identities=19% Similarity=0.275 Sum_probs=188.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcc----ccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT----AKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.|++|.. .|++++|+|++++|++|+.|+.|++|+.............. ........ ..+..+..++.+.+|+
T Consensus 80 ~~l~~h~~-~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 80 RALRGHSH-FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN--RQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS--SCEEEEETTSCEEEEC
T ss_pred EEEeCCCC-CEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC--ccceeecCCCeEEEEE
Confidence 46889999 89999999999999999999999999998763322221111 11111111 1122345577888888
Q ss_pred CCCcCc-ccccccccCCeEEEEEecCCC-cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 78 GPSVGP-RGIYNGHEDTVEDVTFCPSSA-QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 78 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
...... .....+|...+..++|++++. .++++++.|+.|++||+++++ ....+.+|...|++++|+| ++++|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~~h~~~v~~~~~s~-~~~~l~s~ 233 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK--LKTNHIGHTGYLNTVTVSP-DGSLCASG 233 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECT-TSSEEEEE
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc--eeeEecCCCCcEEEEEECC-CCCEEEEE
Confidence 765443 445678999999999988753 467899999999999998877 6778889999999999999 99999999
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+.||.|++||+++ .+++..+.. ...+.+++|+|++. ++ +++.|+.|++||++........ .....
T Consensus 234 s~Dg~i~iwd~~~------~~~~~~~~~-~~~v~~~~~~~~~~-~~-~~~~d~~i~iwd~~~~~~~~~~------~~~~~ 298 (340)
T 4aow_A 234 GKDGQAMLWDLNE------GKHLYTLDG-GDIINALCFSPNRY-WL-CAATGPSIKIWDLEGKIIVDEL------KQEVI 298 (340)
T ss_dssp ETTCEEEEEETTT------TEEEEEEEC-SSCEEEEEECSSSS-EE-EEEETTEEEEEETTTTEEEEEE------CCC--
T ss_pred eCCCeEEEEEecc------CceeeeecC-CceEEeeecCCCCc-ee-eccCCCEEEEEECCCCeEEEec------cccce
Confidence 9999999999998 788888875 46899999999886 44 6667999999999863221110 00112
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.....+|...|++++|+|++.+|+ +|+.||.|+|||++
T Consensus 299 ~~~~~~h~~~v~~l~~s~dg~~l~--------sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 299 STSSKAEPPQCTSLAWSADGQTLF--------AGYTDNLVRVWQVT 336 (340)
T ss_dssp -----CCCCCEEEEEECTTSSEEE--------EEETTSCEEEEEEE
T ss_pred eeeccCCCCCEEEEEECCCCCEEE--------EEeCCCEEEEEeCC
Confidence 234567899999999999888655 45555999999998
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-36 Score=247.66 Aligned_cols=257 Identities=18% Similarity=0.290 Sum_probs=203.0
Q ss_pred CCCcceEEEEECCCCC-EEEEecCCCcEEEEeC----Ccccc------ccccC--------------CccccccCCCCce
Q 021657 7 HQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSI----QDHIT------SSATD--------------PATAKSAGSSGSI 61 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~----~~~~~------~~~~~--------------~~~~~~~~~~~~~ 61 (309)
|.+ .|++++|+|+++ +|++|+.||.|++||+ .++.. ..... ............
T Consensus 44 ~~~-~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 121 (425)
T 1r5m_A 44 KLD-NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN- 121 (425)
T ss_dssp ECS-CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS-
T ss_pred ccC-ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC-
Confidence 446 899999999999 9999999999999999 66541 11110 111111111111
Q ss_pred eecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCc---
Q 021657 62 IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD--- 138 (309)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--- 138 (309)
.+..+..++.+.+|+ .+.+.+..+..|...|.+++|+|++ .+|++++.||.|++||+.+++ ....+..+...
T Consensus 122 -~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 122 -SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGT--VMQHFELKETGGSS 196 (425)
T ss_dssp -EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTE--EEEEECCC------
T ss_pred -EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCc--EEEEeeccccCccc
Confidence 222334577899998 6677788889999999999999998 789999999999999998877 56666666666
Q ss_pred ------------eeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC
Q 021657 139 ------------LHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206 (309)
Q Consensus 139 ------------v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 206 (309)
+.+++|+| + ..+++++.+|.|++||+++ .+.+..+..|...|.+++|+|++++ +++++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~ 267 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITE------KTPTGKLIGHHGPISVLEFNDTNKL-LLSASD 267 (425)
T ss_dssp ---------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTC------SSCSEEECCCSSCEEEEEEETTTTE-EEEEET
T ss_pred eeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCC------CceeeeeccCCCceEEEEECCCCCE-EEEEcC
Confidence 99999998 5 5688999999999999998 7888889899999999999999995 679999
Q ss_pred CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 207 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
|+.|++||++. ......+.+|...|.+++|+|++ ++++++.| +.|++||+.
T Consensus 268 d~~i~i~d~~~---------------~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d-------~~i~i~d~~----- 318 (425)
T 1r5m_A 268 DGTLRIWHGGN---------------GNSQNCFYGHSQSIVSASWVGDD--KVISCSMD-------GSVRLWSLK----- 318 (425)
T ss_dssp TSCEEEECSSS---------------BSCSEEECCCSSCEEEEEEETTT--EEEEEETT-------SEEEEEETT-----
T ss_pred CCEEEEEECCC---------------CccceEecCCCccEEEEEECCCC--EEEEEeCC-------CcEEEEECC-----
Confidence 99999999987 33455667899999999999987 55555544 999999998
Q ss_pred ChhhHhHhhhcccceEEEeeeCC
Q 021657 287 PQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 287 ~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.++++..+..|...|.+++|+|
T Consensus 319 -~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 319 -QNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp -TTEEEEEEECTTCCEEEEEECT
T ss_pred -CCcEeEecccCCccEEEEEEcC
Confidence 6778888889999999999987
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.6e-35 Score=239.27 Aligned_cols=215 Identities=14% Similarity=0.194 Sum_probs=175.9
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+.+|.+ .|++++|+|++++|++++.||.|++||++++..
T Consensus 46 ~~~~~h~~-~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-------------------------------------- 86 (372)
T 1k8k_C 46 HELKEHNG-QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW-------------------------------------- 86 (372)
T ss_dssp EEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEEEETTEE--------------------------------------
T ss_pred eeecCCCC-cccEEEEeCCCCEEEEEcCCCeEEEEECCCCee--------------------------------------
Confidence 46788998 899999999999999999999999999974311
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
.....+..|...|.+++|+|++ .+|++++.|+.|++||++..... .......|...|.+++|+| ++++|++++.||
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg 164 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCDF 164 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEEETTS
T ss_pred eeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEEEEcCCC
Confidence 1122345688999999999998 88999999999999999877631 2233356889999999999 999999999999
Q ss_pred cEEEEecCCCCC------------CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 160 SVRMFDRRNLTS------------NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 160 ~i~i~d~~~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
.|++||++.... ...++.+..+..|...|.+++|+|++.+ +++++.|+.|++||++.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~---------- 233 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR-VAWVSHDSTVCLADADK---------- 233 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE-EEEEETTTEEEEEEGGG----------
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE-EEEEeCCCEEEEEECCC----------
Confidence 999999752110 0016778888889999999999999995 67999999999999987
Q ss_pred CcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 228 TTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...+..+..|..+|.+++|+|++. +++++ .|+.|++|++..
T Consensus 234 -----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~--------~d~~i~i~~~~~ 274 (372)
T 1k8k_C 234 -----KMAVATLASETLPLLAVTFITESS-LVAAG--------HDCFPVLFTYDS 274 (372)
T ss_dssp -----TTEEEEEECSSCCEEEEEEEETTE-EEEEE--------TTSSCEEEEEET
T ss_pred -----CceeEEEccCCCCeEEEEEecCCC-EEEEE--------eCCeEEEEEccC
Confidence 445667788999999999999776 44433 349999999985
No 71
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.8e-36 Score=242.24 Aligned_cols=266 Identities=14% Similarity=0.176 Sum_probs=198.4
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccc----ccccc---CCccccccCCCCceeecCCCCCCCCcc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI----TSSAT---DPATAKSAGSSGSIIKQSPKPGDGNDK 74 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (309)
+...+|.+ .|++++|+|++++|++++.||.|+|||+.+.. ..... ............. ..+..+..++.+.
T Consensus 5 ~~~~~h~~-~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 5 QIEQAPKD-YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD-LQIYVGTVQGEIL 82 (342)
T ss_dssp ECSSCCSS-CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSS-EEEEEEETTSCEE
T ss_pred ecccCCCC-cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCC-cEEEEEcCCCeEE
Confidence 34578998 89999999999999999999999999998654 11111 1111111111111 0233345678999
Q ss_pred cCCC-CCcCccccccc--ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC---------CCcceEEEeeccCCceeEE
Q 021657 75 AADG-PSVGPRGIYNG--HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV---------GTSPVIKVEKAHDADLHCV 142 (309)
Q Consensus 75 ~~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~v~~~ 142 (309)
+|+. ...+. ..+.+ |...|.+++|+| + .+|++++.|+.|++||+++ .+ ....+. |...|.++
T Consensus 83 ~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~-~~~~v~~~ 156 (342)
T 1yfq_A 83 KVDLIGSPSF-QALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNL--NSNNTK-VKNKIFTM 156 (342)
T ss_dssp EECSSSSSSE-EECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEES--CSSSSS-SCCCEEEE
T ss_pred EEEeccCCce-EeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCC--eeeEEe-eCCceEEE
Confidence 9998 66644 67788 999999999999 6 8899999999999999986 44 233333 88899999
Q ss_pred EeccCCCCeEEEEcCCCcEEEEecCC-CCCCCCCCceeeeccCCCCeeEEEEec-CCCcEEEEecCCCcEEEEeCCcccc
Q 021657 143 DWNPLDDNLILTGSADNSVRMFDRRN-LTSNGVGSPINKFEGHSAAVLCVQWSP-DKSSVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 143 ~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
+|+| ++ +++++.|+.|++||+++ .. .........+...+.+++|+| ++.. +++++.||.|++|+++..+.
T Consensus 157 ~~~~-~~--l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~~~~i~~i~~~~~~~~~-l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 157 DTNS-SR--LIVGMNNSQVQWFRLPLCED----DNGTIEESGLKYQIRDVALLPKEQEG-YACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp EECS-SE--EEEEESTTEEEEEESSCCTT----CCCEEEECSCSSCEEEEEECSGGGCE-EEEEETTSEEEEEECCTTCC
T ss_pred EecC-Cc--EEEEeCCCeEEEEECCcccc----ccceeeecCCCCceeEEEECCCCCCE-EEEEecCCcEEEEEEcCCCc
Confidence 9998 55 99999999999999987 32 223334456788999999999 9985 67999999999999987310
Q ss_pred cccCCCCCcCCCCceeeeecCCC---------cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhH
Q 021657 221 KVEQGPRTTNYPAGLFFQHAGHR---------DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEV 291 (309)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~ 291 (309)
.. .......+..|. ..|.+++|+|++.+++ +|+.||.|++||+. ++++
T Consensus 229 ~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~--------~~~~dg~i~vwd~~------~~~~ 285 (342)
T 1yfq_A 229 DY---------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY--------TAGSDGIISCWNLQ------TRKK 285 (342)
T ss_dssp ST---------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE--------EEETTSCEEEEETT------TTEE
T ss_pred cc---------ccccceeeecccccccccccceeEEEEEEcCCCCEEE--------EecCCceEEEEcCc------cHhH
Confidence 00 012334455554 4999999999888655 44455999999999 6778
Q ss_pred hHhhhcc-cceEEEee
Q 021657 292 LAELEKF-KAHVISCT 306 (309)
Q Consensus 292 ~~~~~~h-~~~v~~~~ 306 (309)
+.++.+| .++|.+++
T Consensus 286 ~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 286 IKNFAKFNEDSVVKIA 301 (342)
T ss_dssp EEECCCCSSSEEEEEE
T ss_pred hhhhhcccCCCceEec
Confidence 8889998 99999886
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.7e-36 Score=247.66 Aligned_cols=241 Identities=14% Similarity=0.176 Sum_probs=173.5
Q ss_pred CCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccc-----------cccc--C--------------CccccccCCCC
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIT-----------SSAT--D--------------PATAKSAGSSG 59 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~-----------~~~~--~--------------~~~~~~~~~~~ 59 (309)
|.+ .|++++|+|+|++|++|+.||.|+|||+.+... .... . ...........
T Consensus 27 ~~~-~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EAD-IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGG-SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccC-cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 455 899999999999999999999999999986541 1111 0 01111111111
Q ss_pred ceeecCCCCCCCCcccCCCCCcCcc----------------------------------------cccccccCCeEEEEE
Q 021657 60 SIIKQSPKPGDGNDKAADGPSVGPR----------------------------------------GIYNGHEDTVEDVTF 99 (309)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~v~~~~~ 99 (309)
....+..+..++.+++|+....... ....+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 1012223356788888887653321 113679999999999
Q ss_pred ecCCCcEEEEEcCCCeEEEEEcCCCCcceEE-------EeeccCCceeEEEeccCCC-CeEEEEcCCCcEEEEecCCCCC
Q 021657 100 CPSSAQEFCSVGDDSCLILWDARVGTSPVIK-------VEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 100 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
+|++ .+|++| .|+.|++||++.... ... .+..|...|.+++|+| ++ ++|++|+.||.|++||+++
T Consensus 186 ~~~~-~~l~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~--- 258 (447)
T 3dw8_B 186 NSDY-ETYLSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRA--- 258 (447)
T ss_dssp CTTS-SEEEEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTT---
T ss_pred cCCC-CEEEEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcC---
Confidence 9998 788888 799999999984432 222 2568999999999999 77 9999999999999999998
Q ss_pred CCCCCc----eeeeccCCC------------CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 172 NGVGSP----INKFEGHSA------------AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 172 ~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
++. +..+..|.. .|.+++|+|++++ +++++. +.|++||++..++ +
T Consensus 259 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~-~~v~iwd~~~~~~--------------~ 319 (447)
T 3dw8_B 259 ---SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRDY-LSVKVWDLNMENR--------------P 319 (447)
T ss_dssp ---CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEES-SEEEEEETTCCSS--------------C
T ss_pred ---CccccceeeEeccCCCccccccccccCceEEEEEECCCCCE-EEEeeC-CeEEEEeCCCCcc--------------c
Confidence 554 677877765 8999999999996 568887 9999999986333 2
Q ss_pred eeeecCCCcc---------------eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 236 FFQHAGHRDK---------------VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 236 ~~~~~~~~~~---------------v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+..+.+|... +..++|+|++.++ + +|+.||.|++||+..
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~-------s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-M-------TGSYNNFFRMFDRNT 373 (447)
T ss_dssp SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-E-------EECSTTEEEEEETTT
T ss_pred cceeeccccccccccccccccccccceEEEECCCCCEE-E-------EeccCCEEEEEEcCC
Confidence 3344455421 3349999998876 4 555559999999984
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.4e-35 Score=235.61 Aligned_cols=259 Identities=15% Similarity=0.244 Sum_probs=194.9
Q ss_pred CCCCcceEEEEECCC---CCEEEEecCCCcEEEEeCCccc-cccccCC--cccccc------CCCCceeecCCCCCCCCc
Q 021657 6 GHQDNAEFALAMCPT---EPYVLSGGKDKSVVLWSIQDHI-TSSATDP--ATAKSA------GSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~---~~~l~t~~~dg~i~vwd~~~~~-~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~ 73 (309)
+|.. .|++++|+|+ +.+|++|+.||.|++||+.+.. ....... ...... ........+..+..++.+
T Consensus 63 ~~~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 63 EKAK-PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EESS-CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred cccC-cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 6777 8999999998 6999999999999999998764 2221111 111000 001111123345568899
Q ss_pred ccCCCCCcC-cccccccccC----CeEEEE----EecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEe
Q 021657 74 KAADGPSVG-PRGIYNGHED----TVEDVT----FCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDW 144 (309)
Q Consensus 74 ~~~~~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 144 (309)
.+|+..+.+ ++..+..|.+ .|.++. |+|++ .+|++++.||.|++||+++++ . .....|...|.+++|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~--~-~~~~~~~~~v~~~~~ 217 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMA--L-RWETNIKNGVCSLEF 217 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTE--E-EEEEECSSCEEEEEE
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCc--e-eeecCCCCceEEEEc
Confidence 999998876 6777766554 899998 67777 889999999999999998877 3 444678899999999
Q ss_pred ccC--CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec-----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 145 NPL--DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE-----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 145 ~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+|. ++.++++++.||.|++||+++ .+.+..+. .|...|++++|+|+++.++++++.||.|++||++.
T Consensus 218 ~~~~~~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 218 DRKDISMNKLVATSLEGKFHVFDMRT------QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp SCSSSSCCEEEEEESTTEEEEEEEEE------EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred CCCCCCCCEEEEECCCCeEEEEeCcC------CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 985 578999999999999999998 55555444 89999999999999986678999999999999987
Q ss_pred ccccccCCCCC----cCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 218 VGKKVEQGPRT----TNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 218 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
........... .......+..+.+|...|.+++|+|++.+++++++.| |.|++||+..
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d-------~~i~iw~~~~ 353 (357)
T 3i2n_A 292 PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD-------QTVRVLIVTK 353 (357)
T ss_dssp CSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT-------SEEEEEEECC
T ss_pred CcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC-------CcEEEEECCC
Confidence 44332111100 0011246778889999999999999999887777766 9999999983
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-35 Score=243.56 Aligned_cols=245 Identities=11% Similarity=0.099 Sum_probs=194.1
Q ss_pred cccCCCCCcceEEEEECCC----C---CEEEEecCCCcEEEEeCCcccc-----ccccCCc---------cccccCCC--
Q 021657 2 EILTGHQDNAEFALAMCPT----E---PYVLSGGKDKSVVLWSIQDHIT-----SSATDPA---------TAKSAGSS-- 58 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~----~---~~l~t~~~dg~i~vwd~~~~~~-----~~~~~~~---------~~~~~~~~-- 58 (309)
..+.+|.. .|++++|+|+ + ++|++++.||.|++||+.+... ....... ........
T Consensus 56 ~~~~~h~~-~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 56 YSHFVHKS-GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEECCTT-CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred eEEecCCC-cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 45678998 8999999999 9 9999999999999999987653 2222111 11111100
Q ss_pred Cceee-cCCCCCCCCcccCCCCC------cCccc-----cc-------ccccCCeEEEEEecCCCcEEEEEcCCCeEEEE
Q 021657 59 GSIIK-QSPKPGDGNDKAADGPS------VGPRG-----IY-------NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 119 (309)
Q Consensus 59 ~~~~~-~~~~~~~~~~~~~~~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iw 119 (309)
..... +..+..++.+.+|+... .+.+. .+ ..|...|.+++|+|++ +|++++.||.|++|
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEE
Confidence 11112 33345678899999888 66666 66 4488999999999987 89999999999999
Q ss_pred EcCCCCcceEEEeec---c---CCceeEEEeccCCCCeEEEEcCC---CcEEEEecCCCCCCCCCCceeeecc-------
Q 021657 120 DARVGTSPVIKVEKA---H---DADLHCVDWNPLDDNLILTGSAD---NSVRMFDRRNLTSNGVGSPINKFEG------- 183 (309)
Q Consensus 120 d~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~------- 183 (309)
|+++++ ....+.. | ...|.+++|+| ++.+|++++.| |.|++||+++ ++.+..+..
T Consensus 213 d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~------~~~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 213 ELSTLR--PLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEF------GERIGSLSVPTHSSQA 283 (397)
T ss_dssp ETTTTE--EEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTT------CCEEEEECBC------
T ss_pred ECCCCc--eeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCC------CcccceeccCcccccc
Confidence 998876 6777777 8 99999999999 99999999999 9999999998 888899988
Q ss_pred ------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec------CC---------
Q 021657 184 ------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA------GH--------- 242 (309)
Q Consensus 184 ------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--------- 242 (309)
|...|.+++|+|++++ |++++.||.|++||++. ...+..+. +|
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~---------------~~~~~~~~~~~~~~~~~~~~~~g~~ 347 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGET-LCSAGWDGKLRFWDVKT---------------KERITTLNMHCDDIEIEEDILAVDE 347 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSE-EEEEETTSEEEEEETTT---------------TEEEEEEECCGGGCSSGGGCCCBCT
T ss_pred cccccccCCcEEEEEECCCCCE-EEEEeCCCeEEEEEcCC---------------CceeEEEecccCcccchhhhhcccc
Confidence 9999999999999996 67999999999999987 23344444 55
Q ss_pred ------CcceeeEEEccCCC---------eEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 243 ------RDKVVDFHWNASDP---------WTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 243 ------~~~v~~~~~~~~~~---------~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...|.+++|+|++. .++++++.| |.|++|++.
T Consensus 348 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d-------g~i~iw~~~ 394 (397)
T 1sq9_A 348 HGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD-------RSIRWFREA 394 (397)
T ss_dssp TSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT-------TEEEEEEEE
T ss_pred ccccccCCceeEEEeccccccccccccccceEEEecCC-------CcEEEEEcC
Confidence 89999999999873 456655544 999999997
No 75
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-34 Score=253.41 Aligned_cols=204 Identities=22% Similarity=0.439 Sum_probs=169.7
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+.+|.. .|++++|+|++++|++|+.||+|+|||+.++
T Consensus 424 ~~~~~h~~-~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~---------------------------------------- 462 (694)
T 3dm0_A 424 RRLTGHSH-FVEDVVLSSDGQFALSGSWDGELRLWDLAAG---------------------------------------- 462 (694)
T ss_dssp EEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTT----------------------------------------
T ss_pred ceecCCCC-cEEEEEECCCCCEEEEEeCCCcEEEEECCCC----------------------------------------
Confidence 35789999 8999999999999999999999999999742
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE---eeccCCceeEEEeccCCC--CeEEEEc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV---EKAHDADLHCVDWNPLDD--NLILTGS 156 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~--~~l~~~~ 156 (309)
.....+.+|...|.+++|+|++ .+|++|+.|++|++||..... .... ..+|...|.+++|+| ++ ..+++++
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s 538 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGEC--KYTISEGGEGHRDWVSCVRFSP-NTLQPTIVSAS 538 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCE--EEEECSSTTSCSSCEEEEEECS-CSSSCEEEEEE
T ss_pred cceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCc--ceeeccCCCCCCCcEEEEEEeC-CCCcceEEEEe
Confidence 3345677899999999999998 789999999999999986443 2222 246888999999999 65 5899999
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
.|+.|++||+++ .+....+.+|...|++++|+|++++ +++|+.||.|++||++. ...+
T Consensus 539 ~d~~v~vwd~~~------~~~~~~~~~h~~~v~~v~~spdg~~-l~sg~~Dg~i~iwd~~~---------------~~~~ 596 (694)
T 3dm0_A 539 WDKTVKVWNLSN------CKLRSTLAGHTGYVSTVAVSPDGSL-CASGGKDGVVLLWDLAE---------------GKKL 596 (694)
T ss_dssp TTSCEEEEETTT------CCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSBCEEEETTT---------------TEEE
T ss_pred CCCeEEEEECCC------CcEEEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCC---------------CceE
Confidence 999999999998 8888999999999999999999995 67999999999999987 2233
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+. +...|.+++|+|++.. ++++++ +.|++||+..
T Consensus 597 ~~~~-~~~~v~~~~~sp~~~~-l~~~~~--------~~i~iwd~~~ 632 (694)
T 3dm0_A 597 YSLE-ANSVIHALCFSPNRYW-LCAATE--------HGIKIWDLES 632 (694)
T ss_dssp ECCB-CSSCEEEEEECSSSSE-EEEEET--------TEEEEEETTT
T ss_pred EEec-CCCcEEEEEEcCCCcE-EEEEcC--------CCEEEEECCC
Confidence 3333 3467999999997764 433332 5799999983
No 76
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-36 Score=251.76 Aligned_cols=188 Identities=12% Similarity=0.088 Sum_probs=149.9
Q ss_pred ccccccCCeEEEEEecCC-----CcEEEEEcCCCeEEEEEcCCCCcc---------eEEEeeccCCceeEEEeccCCCCe
Q 021657 86 IYNGHEDTVEDVTFCPSS-----AQEFCSVGDDSCLILWDARVGTSP---------VIKVEKAHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~-----~~~l~s~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~ 151 (309)
.+..|.+.|.+++|+|++ ..+||+++.||+|++||+..+... ....+.+|...|++++|+| + ..
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~ 279 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TT 279 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-Ce
Confidence 356678899999999961 268999999999999999766421 1235678999999999998 4 58
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEE--EEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV--QWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 229 (309)
|++|+.||+|++||+++. ..+...+.+|...|++| +|+|++..+||+|+.|++|+|||++..
T Consensus 280 lasgs~DgtV~lWD~~~~-----~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~----------- 343 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDP-----EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI----------- 343 (524)
T ss_dssp EEEEETTSEEEEEETTBC-----SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH-----------
T ss_pred EEEEeCCCEEEEEECCCC-----CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC-----------
Confidence 999999999999999972 24556788999999999 567887346889999999999999872
Q ss_pred CCCCceeeeecCCCc--ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 230 NYPAGLFFQHAGHRD--KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
.....+.+|.. .|.+++|+|++..++ +++ .|++|++||++ .+.++.++.+|.+.|++++|
T Consensus 344 ----~~~~~~~~~~~~~~v~~v~fsp~~~~l~-s~~-------~d~tv~lwd~~------~~~~~~~l~gH~~~V~sva~ 405 (524)
T 2j04_B 344 ----ATTKTTVSRFRGSNLVPVVYCPQIYSYI-YSD-------GASSLRAVPSR------AAFAVHPLVSRETTITAIGV 405 (524)
T ss_dssp ----HHHCEEEEECSCCSCCCEEEETTTTEEE-EEC-------SSSEEEEEETT------CTTCCEEEEECSSCEEEEEC
T ss_pred ----CcccccccccccCcccceEeCCCcCeEE-EeC-------CCCcEEEEECc------ccccceeeecCCCceEEEEe
Confidence 22233445543 588999999887644 444 44899999998 56677788899999999999
Q ss_pred CC
Q 021657 308 KP 309 (309)
Q Consensus 308 ~P 309 (309)
+|
T Consensus 406 Sp 407 (524)
T 2j04_B 406 SR 407 (524)
T ss_dssp CS
T ss_pred CC
Confidence 98
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-35 Score=241.42 Aligned_cols=264 Identities=19% Similarity=0.276 Sum_probs=204.5
Q ss_pred CCCCCc-ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC-----ccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 5 TGHQDN-AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-----ATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 5 ~~H~~~-~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
.+|.+. .+.+++|++ ..+++++.||.|++||+.++........ ........... .+..+..++.+.+|+.
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~--~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGS--FLSVGLGNGLVDIYDV 163 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSS--EEEEEETTSCEEEEET
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCC--EEEEECCCCeEEEEEC
Confidence 355551 234466654 5688899999999999988743322211 11112222222 2333455789999999
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.+.+.+..+.+|...|.+++|++ .+|++++.||.|++||++.... ....+..|...|.+++|+| ++.+|++|+.|
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d 238 (401)
T 4aez_A 164 ESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANH-QIGTLQGHSSEVCGLAWRS-DGLQLASGGND 238 (401)
T ss_dssp TTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECT-TSSEEEEEETT
T ss_pred cCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcc-eeeEEcCCCCCeeEEEEcC-CCCEEEEEeCC
Confidence 99999999999999999999943 6899999999999999985442 5677788999999999999 99999999999
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec--CCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA--EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|.|++||+++ .+++..+..|...|.+++|+|++..++++++ .|+.|++||++. ...+
T Consensus 239 ~~v~iwd~~~------~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~---------------~~~~ 297 (401)
T 4aez_A 239 NVVQIWDARS------SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT---------------GARV 297 (401)
T ss_dssp SCEEEEETTC------SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT---------------CCEE
T ss_pred CeEEEccCCC------CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC---------------CCEE
Confidence 9999999998 8888899999999999999999988888865 799999999987 2333
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+. +...|.+++|+|++..+++++ |+.||.|++||+... .......+.+|.+.|.+++|+|
T Consensus 298 ~~~~-~~~~v~~~~~s~~~~~l~~~~------g~~dg~i~v~~~~~~----~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 298 NTVD-AGSQVTSLIWSPHSKEIMSTH------GFPDNNLSIWSYSSS----GLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp EEEE-CSSCEEEEEECSSSSEEEEEE------CTTTCEEEEEEEETT----EEEEEEEEECCSSCCCEEEECT
T ss_pred EEEe-CCCcEEEEEECCCCCeEEEEe------ecCCCcEEEEecCCc----cceeEEEecCCCCCEEEEEECC
Confidence 3443 567899999999998877542 345699999999831 1233445678999999999987
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.8e-35 Score=237.78 Aligned_cols=203 Identities=10% Similarity=0.085 Sum_probs=149.0
Q ss_pred CcccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccc---ccccc--CC--ccccccCCCCceeecCCCCCCCCc
Q 021657 1 MEILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSAT--DP--ATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 1 l~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~---~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
++.+++|.+ .|++++|+|++++|++++.||+|++||+.++. ..... .. .......... ..+..+..++.+
T Consensus 48 ~~~~~~h~~-~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i 124 (377)
T 3dwl_C 48 ARTFSDHDK-IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE--DKFAVGSGARVI 124 (377)
T ss_dssp CCCBCCCSS-CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS--SCCEEEESSSCE
T ss_pred EEEEecCCc-eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC--CEEEEEecCCeE
Confidence 357889999 89999999999999999999999999998764 11111 11 1111111111 122334457889
Q ss_pred ccCCCCCcC---ccccccc-ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC----------------cceEEEee
Q 021657 74 KAADGPSVG---PRGIYNG-HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT----------------SPVIKVEK 133 (309)
Q Consensus 74 ~~~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----------------~~~~~~~~ 133 (309)
.+|+....+ ....+.+ |...|++++|+|++ .+|++++.|+.|++||++... ......+
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 999998876 3666777 99999999999998 889999999999999986322 1133444
Q ss_pred ccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCc----eeeeccCCCCeeEEEEecCCCcEEEEecCCCc
Q 021657 134 AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP----INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 209 (309)
Q Consensus 134 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~ 209 (309)
.|...|.+++|+| ++++|++++.||.|++||+++ ++. +..+..|...|.+++|+|++++ +++++.++.
T Consensus 203 ~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~~~ 274 (377)
T 3dwl_C 203 PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSA------PEQPPRALITVKLSQLPLRSLLWANESAI-VAAGYNYSP 274 (377)
T ss_dssp CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECS------TTSCEEECCCEECSSSCEEEEEEEETTEE-EEEESSSSE
T ss_pred cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCC------CCCcceeeEeecCCCCceEEEEEcCCCCE-EEEEcCCcE
Confidence 8999999999999 999999999999999999998 665 7888899999999999999985 668876655
Q ss_pred EEEEeCCc
Q 021657 210 LNIWDYEK 217 (309)
Q Consensus 210 i~iwd~~~ 217 (309)
+ +|+...
T Consensus 275 ~-~~~~~~ 281 (377)
T 3dwl_C 275 I-LLQGNE 281 (377)
T ss_dssp E-EECCCC
T ss_pred E-EEEeCC
Confidence 5 777764
No 79
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.2e-34 Score=266.90 Aligned_cols=242 Identities=20% Similarity=0.361 Sum_probs=200.2
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.+|.+ .|++++|+|++++|++|+.||+|++||+.+ .+
T Consensus 610 ~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~----------------------------------------~~ 648 (1249)
T 3sfz_A 610 VVRPHTD-AVYHACFSQDGQRIASCGADKTLQVFKAET----------------------------------------GE 648 (1249)
T ss_dssp EECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTT----------------------------------------CC
T ss_pred EEecccc-cEEEEEECCCCCEEEEEeCCCeEEEEECCC----------------------------------------CC
Confidence 4678999 899999999999999999999999999974 33
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-CCCeEEEEcCCCcE
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDNLILTGSADNSV 161 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i 161 (309)
.+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++ ....+.+|...|.+++|+|. +..++++|+.|+.|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGK--LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred EEEEeccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCCCc--eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeE
Confidence 456677899999999999998 889999999999999999888 78888899999999999983 23488999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC-------------
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT------------- 228 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~------------- 228 (309)
++||+++ ++.+..+.+|...|++++|+|+++. +++++.||.|++||++............
T Consensus 726 ~vwd~~~------~~~~~~~~~h~~~v~~~~~sp~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 726 KLWDLNQ------KECRNTMFGHTNSVNHCRFSPDDEL-LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp EEEETTS------SSEEEEECCCSSCEEEEEECSSTTE-EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCC
T ss_pred EEEECCC------cchhheecCCCCCEEEEEEecCCCE-EEEEECCCeEEEEeCCCCcccceecccccccccCCcccccc
Confidence 9999999 8899999999999999999999995 6799999999999998643211100000
Q ss_pred ---------cC-----------------CCCceee-eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 229 ---------TN-----------------YPAGLFF-QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 229 ---------~~-----------------~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.. ....... ...+|...|.+++|+|++..++ +++.||.|++||+.
T Consensus 799 ~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~--------~~~~dg~v~vwd~~ 870 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAV--------IALSQYCVELWNID 870 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEE--------EECSSSCEEEEETT
T ss_pred ceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEE--------EEeCCCeEEEEEcC
Confidence 00 0001111 2237889999999999888655 45555999999999
Q ss_pred ccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 282 DLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 282 ~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
++.++..+.+|.+.|.+++|+|
T Consensus 871 ------~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 871 ------SRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp ------TTEEEEEECCCSSCEEEEEECT
T ss_pred ------CCceeeecCCCccceEEEEECC
Confidence 6778888999999999999987
No 80
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-34 Score=241.67 Aligned_cols=230 Identities=22% Similarity=0.341 Sum_probs=189.7
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.|++|.+..++++.+ ++++|++|+.||+|++||+.+ .
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~----------------------------------------~ 152 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN----------------------------------------K 152 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT----------------------------------------T
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC----------------------------------------C
Confidence 3688999955677777 568999999999999999874 3
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEecc-CCCCeEEEEcCCCc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP-LDDNLILTGSADNS 160 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~ 160 (309)
+.+..+.+|.+.|++++|+|++ +|++|+.||+|++||+++++ ....+.+|...|.+++|++ .++.++++|+.||.
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 3456677899999999999876 79999999999999999887 6778889999999999984 16789999999999
Q ss_pred EEEEecCCCCCCCC-----------------CCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 161 VRMFDRRNLTSNGV-----------------GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 161 i~i~d~~~~~~~~~-----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
|++||+++...... ...+..+.+|...+.++ ++++.. +++++.||.|++||++.
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-l~~~~~d~~i~vwd~~~------ 299 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNI-VVSGSYDNTLIVWDVAQ------ 299 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTE-EEEEETTSCEEEEETTT------
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCE-EEEEeCCCeEEEEECCC------
Confidence 99999987431100 00245667788888776 567775 67999999999999987
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEE
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVI 303 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~ 303 (309)
...+..+.+|...|.+++|+|++..++ +|+.||.|++||+. +++++.++.+|...|.
T Consensus 300 ---------~~~~~~~~~~~~~v~~~~~~~~~~~l~--------sg~~dg~i~vwd~~------~~~~~~~~~~h~~~v~ 356 (464)
T 3v7d_B 300 ---------MKCLYILSGHTDRIYSTIYDHERKRCI--------SASMDTTIRIWDLE------NGELMYTLQGHTALVG 356 (464)
T ss_dssp ---------TEEEEEECCCSSCEEEEEEETTTTEEE--------EEETTSCEEEEETT------TTEEEEEECCCSSCEE
T ss_pred ---------CcEEEEecCCCCCEEEEEEcCCCCEEE--------EEeCCCcEEEEECC------CCcEEEEEeCCCCcEE
Confidence 455677889999999999999888655 45555999999998 6888899999999999
Q ss_pred EeeeCC
Q 021657 304 SCTSKP 309 (309)
Q Consensus 304 ~~~~~P 309 (309)
+++|+|
T Consensus 357 ~~~~~~ 362 (464)
T 3v7d_B 357 LLRLSD 362 (464)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999875
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-34 Score=241.98 Aligned_cols=260 Identities=21% Similarity=0.289 Sum_probs=203.1
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+.+|.+ .|++++|+|++ +|++|+.||+|++||++++......... .............+..+..++.+.+|+
T Consensus 156 ~~~~~h~~-~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 156 LQLSGHDG-GVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EEECCCSS-CEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEEeCCCc-CEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 46789999 89999999988 9999999999999999987443332211 111111111122344455678888888
Q ss_pred CCCcCc-----------------------ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec
Q 021657 78 GPSVGP-----------------------RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA 134 (309)
Q Consensus 78 ~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 134 (309)
..+... ...+.+|...|.++ ++++ .++++|+.||.|++||+++++ ....+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~-~~l~~~~~d~~i~vwd~~~~~--~~~~~~~ 308 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHG-NIVVSGSYDNTLIVWDVAQMK--CLYILSG 308 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEET-TEEEEEETTSCEEEEETTTTE--EEEEECC
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCC-CEEEEEeCCCeEEEEECCCCc--EEEEecC
Confidence 776543 34567888888877 4556 789999999999999998877 6778889
Q ss_pred cCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEe
Q 021657 135 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 135 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd 214 (309)
|...|.+++|+| +++++++|+.||.|++||+++ ++++..+.+|...|.+++|++ . .+++++.||.|++||
T Consensus 309 ~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~------~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 309 HTDRIYSTIYDH-ERKRCISASMDTTIRIWDLEN------GELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWD 378 (464)
T ss_dssp CSSCEEEEEEET-TTTEEEEEETTSCEEEEETTT------TEEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEE
T ss_pred CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCC------CcEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEE
Confidence 999999999999 999999999999999999999 899999999999999999984 4 467999999999999
Q ss_pred CCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHh
Q 021657 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAE 294 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~ 294 (309)
++... ..... .+...+..++|+|++..++ +++ ||.|++||+. +++++..
T Consensus 379 ~~~~~---------------~~~~~-~~~~~~~~~~~~~~~~~l~-~~~--------dg~i~iwd~~------~g~~~~~ 427 (464)
T 3v7d_B 379 ANDYS---------------RKFSY-HHTNLSAITTFYVSDNILV-SGS--------ENQFNIYNLR------SGKLVHA 427 (464)
T ss_dssp TTTCC---------------EEEEE-ECTTCCCEEEEEECSSEEE-EEE--------TTEEEEEETT------TCCEEES
T ss_pred CCCCc---------------eeeee-cCCCCccEEEEEeCCCEEE-Eec--------CCeEEEEECC------CCcEEeh
Confidence 98722 12222 3566788889999877544 333 4899999999 6777765
Q ss_pred -hhcccceEEEeeeCC
Q 021657 295 -LEKFKAHVISCTSKP 309 (309)
Q Consensus 295 -~~~h~~~v~~~~~~P 309 (309)
+.+|.+.|++++|++
T Consensus 428 ~~~~~~~~v~~v~~~~ 443 (464)
T 3v7d_B 428 NILKDADQIWSVNFKG 443 (464)
T ss_dssp CTTTTCSEEEEEEEET
T ss_pred hhccCCCcEEEEEecC
Confidence 677899999999863
No 82
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4e-35 Score=237.16 Aligned_cols=263 Identities=9% Similarity=0.064 Sum_probs=180.8
Q ss_pred CcceEEEEECCCCCEEEEecCCC-------cEEEEeCCccccccc------------cCCc--cccccCCCCce------
Q 021657 9 DNAEFALAMCPTEPYVLSGGKDK-------SVVLWSIQDHITSSA------------TDPA--TAKSAGSSGSI------ 61 (309)
Q Consensus 9 ~~~V~~~~~~~~~~~l~t~~~dg-------~i~vwd~~~~~~~~~------------~~~~--~~~~~~~~~~~------ 61 (309)
+-||++++|+||+++|++|+.|. .|++|++........ .... ..........+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 34899999999999999987543 599999876522110 0000 00111111000
Q ss_pred -eecCCCCCCCCcccCCCCCcCccc---------ccccccCCeEEEEEecCCCcEEE--EEcCCCeEEEEEcCCCCcceE
Q 021657 62 -IKQSPKPGDGNDKAADGPSVGPRG---------IYNGHEDTVEDVTFCPSSAQEFC--SVGDDSCLILWDARVGTSPVI 129 (309)
Q Consensus 62 -~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~ 129 (309)
..+..+..+..+++|+........ ....+...+.+++|+|+| ++++ +++.|++|+|||+.+++ ..
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~--~~ 170 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLT--EK 170 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTE--EE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCc--EE
Confidence 111123345666676654332211 112344568899999999 5554 45579999999998877 44
Q ss_pred EEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCcee--eeccCCCCeeEEEEecCCCcEEEEecCC
Q 021657 130 KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN--KFEGHSAAVLCVQWSPDKSSVFGSSAED 207 (309)
Q Consensus 130 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~d 207 (309)
..+ .|...|.+++|+| +++++++++.+ .+++|+..+ ++.+. ....|...|.+++|+|++.. +++++.|
T Consensus 171 ~~~-~~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~------~~~~~~~~~~~~~~~v~~v~fspdg~~-l~~~s~d 240 (365)
T 4h5i_A 171 FEI-ETRGEVKDLHFST-DGKVVAYITGS-SLEVISTVT------GSCIARKTDFDKNWSLSKINFIADDTV-LIAASLK 240 (365)
T ss_dssp EEE-ECSSCCCEEEECT-TSSEEEEECSS-CEEEEETTT------CCEEEEECCCCTTEEEEEEEEEETTEE-EEEEEES
T ss_pred EEe-CCCCceEEEEEcc-CCceEEeccce-eEEEEEecc------CcceeeeecCCCCCCEEEEEEcCCCCE-EEEEecC
Confidence 444 4778899999999 99999999855 566666666 44443 34567888999999999996 4577766
Q ss_pred C----cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 208 G----LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 208 g----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
+ .+++|++...... ......+.+|...|++++|+|++.+ +|++ +.|++|+|||+.
T Consensus 241 ~~~~~~i~~~~~~~~~~~-----------~~~~~~~~~~~~~V~~~~~Spdg~~-lasg-------s~D~~V~iwd~~-- 299 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTS-----------VLRSKQVTNRFKGITSMDVDMKGEL-AVLA-------SNDNSIALVKLK-- 299 (365)
T ss_dssp SSCCEEEEEEEEETTEEE-----------EEEEEEEESSCSCEEEEEECTTSCE-EEEE-------ETTSCEEEEETT--
T ss_pred CcceeEEeecccccceec-----------ceeeeeecCCCCCeEeEEECCCCCc-eEEE-------cCCCEEEEEECC--
Confidence 6 5788888762221 1124566789999999999998875 4544 445999999999
Q ss_pred ccCChhhHhHh-hhcccceEEEeeeCC
Q 021657 284 IYRPQDEVLAE-LEKFKAHVISCTSKP 309 (309)
Q Consensus 284 ~~~~~~~~~~~-~~~h~~~v~~~~~~P 309 (309)
+++++.+ +.+|.++|++++|+|
T Consensus 300 ----~~~~~~~~~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 300 ----DLSMSKIFKQAHSFAITEVTISP 322 (365)
T ss_dssp ----TTEEEEEETTSSSSCEEEEEECT
T ss_pred ----CCcEEEEecCcccCCEEEEEECC
Confidence 6788877 578999999999998
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=234.63 Aligned_cols=246 Identities=13% Similarity=0.154 Sum_probs=190.6
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC---ccccccCCCCceeecCC---CCCCCCccc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP---ATAKSAGSSGSIIKQSP---KPGDGNDKA 75 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~ 75 (309)
+.+.+|.+ .|++++|+|++++|++++.||.|++||+.++........ ................. ....+.+.+
T Consensus 68 ~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~ 146 (369)
T 3zwl_B 68 GTLDGHTG-TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINI 146 (369)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEE
T ss_pred hhhhhcCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEE
Confidence 46788999 899999999999999999999999999987743332221 11111111221111111 122367777
Q ss_pred CCCCCcC-----------cccccccccC--CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEE
Q 021657 76 ADGPSVG-----------PRGIYNGHED--TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 142 (309)
Q Consensus 76 ~~~~~~~-----------~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 142 (309)
|+..... ....+..|.. .+.+++|+|++ .+|++++.||.|++||+++... ....+..|...|.++
T Consensus 147 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 147 YEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYE-YVDSIDLHEKSISDM 224 (369)
T ss_dssp EEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTE-EEEEEECCSSCEEEE
T ss_pred EEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcE-eEEEEecCCCceeEE
Confidence 7765543 3344455665 89999999998 7899999999999999987332 677778899999999
Q ss_pred EeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--------------
Q 021657 143 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG-------------- 208 (309)
Q Consensus 143 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg-------------- 208 (309)
+|+| ++.+|++++.|+.|++||+++ ++.+..+. +...+.+++|+|+++++ ++++.++
T Consensus 225 ~~~~-~~~~l~~~~~d~~i~v~d~~~------~~~~~~~~-~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 225 QFSP-DLTYFITSSRDTNSFLVDVST------LQVLKKYE-TDCPLNTAVITPLKEFI-ILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp EECT-TSSEEEEEETTSEEEEEETTT------CCEEEEEE-CSSCEEEEEECSSSSEE-EEEECCC-------------C
T ss_pred EECC-CCCEEEEecCCceEEEEECCC------Cceeeeec-CCCCceeEEecCCCceE-EEeecCCCceEEEEecCCCcc
Confidence 9999 999999999999999999998 78888887 67889999999999975 5777677
Q ss_pred cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 209 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 209 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+++||+.. ...+..+.+|...|.+++|+|++.+++ +++.||.|++|++..
T Consensus 296 ~i~~~d~~~---------------~~~~~~~~~~~~~v~~~~~s~~~~~l~--------s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 296 EARFYHKIF---------------EEEIGRVQGHFGPLNTVAISPQGTSYA--------SGGEDGFIRLHHFEK 346 (369)
T ss_dssp EEEEEETTT---------------CCEEEEEECCSSCEEEEEECTTSSEEE--------EEETTSEEEEEEECH
T ss_pred eeEEEecCC---------------CcchhheecccCcEEEEEECCCCCEEE--------EEcCCCeEEEEECcc
Confidence 899999887 455667889999999999999887655 444559999999983
No 84
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=258.99 Aligned_cols=236 Identities=11% Similarity=0.091 Sum_probs=174.9
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
..||.+ .|++++|+|++++||+|+.||+|+||+..... .
T Consensus 13 ~~gh~~-~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~----------------------------------------~ 51 (902)
T 2oaj_A 13 KYGMSS-KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE----------------------------------------V 51 (902)
T ss_dssp EEECSS-CEEEEEEETTTTEEEEEETTSEEEEECSTTCE----------------------------------------E
T ss_pred ccCCCC-CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE----------------------------------------E
Confidence 458888 89999999999999999999999999976321 1
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
.. ...|...|.+++|+| + .+|++++.|++|++||+.+++ ....+. |...|++++|+| +++++++|+.||.|++
T Consensus 52 ~~-~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~~~~~--~~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~l 124 (902)
T 2oaj_A 52 VI-KLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVLSLYSQK--VLTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIV 124 (902)
T ss_dssp EE-ECSSCCCEEEEEEET-T-TEEEEEETTCEEEEEETTTCS--EEEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEE
T ss_pred EE-EcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEEECCCCc--EEEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEE
Confidence 11 123678999999999 7 689999999999999999887 555554 678999999999 9999999999999999
Q ss_pred EecCCCCCCCCCCce-----------eeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC-C
Q 021657 164 FDRRNLTSNGVGSPI-----------NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN-Y 231 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~ 231 (309)
||+++ .+.. ..+.+|...|++++|+|++..++++|+.||.| +||++.............. .
T Consensus 125 wd~~~------~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~ 197 (902)
T 2oaj_A 125 YDIDR------DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFA 197 (902)
T ss_dssp EETTT------TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTC
T ss_pred EECCC------CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcC
Confidence 99987 4432 33467889999999999765567899999999 9999873221110000000 0
Q ss_pred CC--ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHh--h---h--------
Q 021657 232 PA--GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAE--L---E-------- 296 (309)
Q Consensus 232 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~--~---~-------- 296 (309)
+. ........|...|++++|+|++.++ + +|+.||.|++||++ +++++.. + .
T Consensus 198 ~~~~~~~~~~~~h~~~V~~v~fspdg~~l-a-------sgs~Dg~i~lWd~~------~g~~~~~r~l~~~~~~~~~~~~ 263 (902)
T 2oaj_A 198 PGGDFSEKTNEKRTPKVIQSLYHPNSLHI-I-------TIHEDNSLVFWDAN------SGHMIMARTVFETEINVPQPDY 263 (902)
T ss_dssp CCSTTCCCTTSCBCCCEEEEEECTTSSEE-E-------EEETTCCEEEEETT------TCCEEEEECSSCSCTTSCCTTC
T ss_pred CCcccccccccccCCCeEEEEEcCCCCEE-E-------EEECCCeEEEEECC------CCcEEEEEeecccccCCCCCcC
Confidence 00 0001123456789999999987754 5 44455999999998 3443321 1 1
Q ss_pred -----cccceEEEeeeC
Q 021657 297 -----KFKAHVISCTSK 308 (309)
Q Consensus 297 -----~h~~~v~~~~~~ 308 (309)
.|.++|.+++|+
T Consensus 264 ~~~~~~~~~~V~~v~w~ 280 (902)
T 2oaj_A 264 IRDSSTNAAKISKVYWM 280 (902)
T ss_dssp CCCCSSCCCEEEEEEEE
T ss_pred CCCCccccCCeeEEEEE
Confidence 245689999995
No 85
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-34 Score=227.92 Aligned_cols=247 Identities=19% Similarity=0.358 Sum_probs=183.8
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc-C
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV-G 82 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 82 (309)
+.+|.. .|++++|+|++++|++|+.||+|++||++++......................+..+..++.+..+..... .
T Consensus 63 ~~~~~~-~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 63 MEQPGE-YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp CCSTTC-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred ecCCCC-eEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCce
Confidence 456777 89999999999999999999999999999875433322111110000000112223344555555555443 4
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCCceeEEEeccCCCCeE--EEEcCC
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNPLDDNLI--LTGSAD 158 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l--~~~~~d 158 (309)
.+..+.+|...+..+.+.+++ .+|++++.||.|++||+++++.. .......+...|.+++++|.+...+ ++++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 142 HVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 556778999999999999998 88999999999999999876532 3345567788999999999444444 466788
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEE-ecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS-SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+.|++||.+. ....... .+...+..+.|+|++..++++ |+.|+.|++||+++ .+++.
T Consensus 221 ~~i~lwd~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~---------------~~~~~ 278 (318)
T 4ggc_A 221 RHIRIWNVCS------GACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT---------------MAKVA 278 (318)
T ss_dssp CEEEEEETTT------CCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT---------------CCEEE
T ss_pred CEEEEEeccc------ccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCC---------------CcEEE
Confidence 9999999987 5555444 467789999999999976543 45799999999987 45677
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+.+|...|++++|+|++.+|+ ||+.||+|+|||+.+
T Consensus 279 ~l~gH~~~V~~l~~spdg~~l~--------S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 279 ELKGHTSRVLSLTMSPDGATVA--------SAAADETLRLWRCFE 315 (318)
T ss_dssp EECCCSSCEEEEEECTTSSCEE--------EEETTTEEEEECCSC
T ss_pred EEcCCCCCEEEEEEcCCCCEEE--------EEecCCeEEEEECCC
Confidence 8899999999999999888655 455559999999974
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.4e-34 Score=247.50 Aligned_cols=263 Identities=19% Similarity=0.319 Sum_probs=205.7
Q ss_pred cccCCCCCcc-eEEEEECC--CCCEEEEecCCCcEEEEeCCcc--------cccccc----CCccccccCCCCceeecCC
Q 021657 2 EILTGHQDNA-EFALAMCP--TEPYVLSGGKDKSVVLWSIQDH--------ITSSAT----DPATAKSAGSSGSIIKQSP 66 (309)
Q Consensus 2 ~~l~~H~~~~-V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~--------~~~~~~----~~~~~~~~~~~~~~~~~~~ 66 (309)
+.+.+|.+ . |++++|+| ++++|++|+.||.|+|||+.++ ...... ...................
T Consensus 57 ~~~~~h~~-~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 135 (615)
T 1pgu_A 57 VQFTGHGS-SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 135 (615)
T ss_dssp EEECTTTT-SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEecCCC-ceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEec
Confidence 46789999 8 99999999 9999999999999999999643 111111 1111112222222222221
Q ss_pred C--CCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCC---ceeE
Q 021657 67 K--PGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA---DLHC 141 (309)
Q Consensus 67 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~ 141 (309)
. ...+.+.+|+ ..+.+..+.+|...|.+++|+|+++.++++++.|+.|++||+.+.+ ....+..|.. .|.+
T Consensus 136 ~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 136 EGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHKQGSFVRD 211 (615)
T ss_dssp CCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSCTTCCEEE
T ss_pred cCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeecccCCCCceEEE
Confidence 1 1225777787 5567788899999999999999985589999999999999998777 6777888998 9999
Q ss_pred EEeccCC-CCeEEEEcCCCcEEEEecCCCCCCCCCCceeee-c---cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 142 VDWNPLD-DNLILTGSADNSVRMFDRRNLTSNGVGSPINKF-E---GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 142 ~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
++|+| + +++|++++.||.|++||+++ ++.+..+ . .|...|.+++|+ ++.. +++++.|+.|++||++
T Consensus 212 ~~~~~-~~~~~l~~~~~dg~i~vwd~~~------~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 212 VEFSP-DSGEFVITVGSDRKISCFDGKS------GEFLKYIEDDQEPVQGGIFALSWL-DSQK-FATVGADATIRVWDVT 282 (615)
T ss_dssp EEECS-TTCCEEEEEETTCCEEEEETTT------CCEEEECCBTTBCCCSCEEEEEES-SSSE-EEEEETTSEEEEEETT
T ss_pred EEECC-CCCCEEEEEeCCCeEEEEECCC------CCEeEEecccccccCCceEEEEEc-CCCE-EEEEcCCCcEEEEECC
Confidence 99999 7 99999999999999999998 8888888 5 799999999999 8885 6799999999999998
Q ss_pred cccccccCCCCCcCCCCceeeeecCC----CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHh
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAGH----RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVL 292 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~ 292 (309)
. ...+..+..+ ...+.++.|. ++.+++ +++.||.|++||+. .++++
T Consensus 283 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~--------~~~~~g~i~~~d~~------~~~~~ 332 (615)
T 1pgu_A 283 T---------------SKCVQKWTLDKQQLGNQQVGVVAT-GNGRII--------SLSLDGTLNFYELG------HDEVL 332 (615)
T ss_dssp T---------------TEEEEEEECCTTCGGGCEEEEEEE-ETTEEE--------EEETTSCEEEEETT------EEEEE
T ss_pred C---------------CcEEEEEcCCCCcccCceeEEEeC-CCCeEE--------EEECCCCEEEEECC------CCcEE
Confidence 7 2333444444 4678888886 566554 44445999999998 67788
Q ss_pred HhhhcccceEEEeeeCC
Q 021657 293 AELEKFKAHVISCTSKP 309 (309)
Q Consensus 293 ~~~~~h~~~v~~~~~~P 309 (309)
..+.+|.+.|.+++| |
T Consensus 333 ~~~~~~~~~v~~~~~-~ 348 (615)
T 1pgu_A 333 KTISGHNKGITALTV-N 348 (615)
T ss_dssp EEECCCSSCEEEEET-T
T ss_pred EEEeCCCCCEEEEEe-c
Confidence 888999999999988 6
No 87
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7e-35 Score=241.56 Aligned_cols=245 Identities=14% Similarity=0.121 Sum_probs=177.5
Q ss_pred ccCCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+.+|.+ .|++|+|+| ++.+|+||+.||+|++||+++....
T Consensus 159 ~~~gH~~-~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~------------------------------------- 200 (435)
T 4e54_B 159 KGIGAGG-SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR------------------------------------- 200 (435)
T ss_dssp CCCSSSC-CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE-------------------------------------
T ss_pred EccCCCC-CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee-------------------------------------
Confidence 4578999 899999998 6899999999999999999743111
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.......+...+.+++|+|++ .+|++|+.||.|++||++.. ....+.+|...|.+++|+|....+|++|+.|+.|
T Consensus 201 -~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 201 -VFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp -EEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred -EEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcc---eeEEEecccceEEeeeecCCCceEEEEecCccee
Confidence 011112344567889999998 89999999999999998643 3566788999999999999444588899999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++||+++... ...+....+|...|++++|+|++.+ |++++.||.|+|||++............. ...
T Consensus 276 ~iwd~~~~~~---~~~~~~~~~h~~~v~~~~~spdg~~-l~s~~~D~~i~iwd~~~~~~~~~~~~~~~---------~~~ 342 (435)
T 4e54_B 276 KIWDLRQVRG---KASFLYSLPHRHPVNAACFSPDGAR-LLTTDQKSEIRVYSASQWDCPLGLIPHPH---------RHF 342 (435)
T ss_dssp CEEETTTCCS---SSCCSBCCBCSSCEEECCBCTTSSE-EEEEESSSCEEEEESSSSSSEEEECCCCC---------CCC
T ss_pred eEEecccccc---cceEEEeeeccccccceeECCCCCe-eEEEcCCCEEEEEECCCCccceEEecccc---------ccc
Confidence 9999998322 1223334578899999999999996 56999999999999987333221110000 000
Q ss_pred CCcceeeEEEccCCCeEEEEecCCC----CCCCCCCeEEEEEccccccCChhhHhHhhh-cccceEEEe-eeCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDC----DSTGGGGTLQIWRMSDLIYRPQDEVLAELE-KFKAHVISC-TSKP 309 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~----~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-~h~~~v~~~-~~~P 309 (309)
....+....|+|++..++++.+.|. .++..++.|++||.. +++++..+. +|...|.++ +|+|
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~------~g~~~~~l~~~~~~~v~s~~~fsp 410 (435)
T 4e54_B 343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGN------SGKMMCQLYDPESSGISSLNEFNP 410 (435)
T ss_dssp SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSS------SCCEEEEECCSSCCCCCCEEEECT
T ss_pred ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECC------CCcEEEEEeCCCCCcEEEEEEECC
Confidence 1112345667777766665555442 145566789999998 566666654 677888887 6887
No 88
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-34 Score=238.24 Aligned_cols=255 Identities=20% Similarity=0.346 Sum_probs=204.1
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccc--cccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATA--KSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
+.+.+|.+ .|++++|+ +++|++|+.||+|++||+.++........... ...... ...+..+..++.+.+|+..
T Consensus 153 ~~~~~h~~-~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~ 227 (445)
T 2ovr_B 153 RTLVGHTG-GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 227 (445)
T ss_dssp EECCCCSS-CEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESS
T ss_pred EEEcCCCC-CEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECC
Confidence 46789999 89999997 67999999999999999988744332221111 000001 1123445668899999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
+.+.+..+.+|...|.++.| ++ .++++|+.||.|++||+++++ ....+.+|...|.+++| ++.++++++.||
T Consensus 228 ~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~ 299 (445)
T 2ovr_B 228 TGQCLHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETET--CLHTLQGHTNRVYSLQF---DGIHVVSGSLDT 299 (445)
T ss_dssp SCCEEEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE---CSSEEEEEETTS
T ss_pred CCcEEEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCc--EeEEecCCCCceEEEEE---CCCEEEEEeCCC
Confidence 99999999999999999999 45 679999999999999998877 67788899999999999 578999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|++||+++ ++.+..+.+|...+.++.++ +. ++++|+.||.|++||++. ...+..+
T Consensus 300 ~i~i~d~~~------~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~---------------~~~~~~~ 355 (445)
T 2ovr_B 300 SIRVWDVET------GNCIHTLTGHQSLTSGMELK--DN-ILVSGNADSTVKIWDIKT---------------GQCLQTL 355 (445)
T ss_dssp CEEEEETTT------CCEEEEECCCCSCEEEEEEE--TT-EEEEEETTSCEEEEETTT---------------CCEEEEE
T ss_pred eEEEEECCC------CCEEEEEcCCcccEEEEEEe--CC-EEEEEeCCCeEEEEECCC---------------CcEEEEE
Confidence 999999999 88999999999999888875 44 467999999999999987 2334444
Q ss_pred cC---CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh-----hcccceEEEeeeCC
Q 021657 240 AG---HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL-----EKFKAHVISCTSKP 309 (309)
Q Consensus 240 ~~---~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~P 309 (309)
.+ |...|.+++|++ . ++++++.| |.|++||+. +++.+..+ .+|.+.|++++|+|
T Consensus 356 ~~~~~~~~~v~~~~~~~--~-~l~s~~~d-------g~v~iwd~~------~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 356 QGPNKHQSAVTCLQFNK--N-FVITSSDD-------GTVKLWDLK------TGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp CSTTSCSSCEEEEEECS--S-EEEEEETT-------SEEEEEETT------TCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred ccCCCCCCCEEEEEECC--C-EEEEEeCC-------CeEEEEECC------CCceeeeeeccccCCCCceEEEEEecC
Confidence 44 888999999974 3 56655544 999999999 56666666 57889999999987
No 89
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-33 Score=226.50 Aligned_cols=236 Identities=15% Similarity=0.256 Sum_probs=187.3
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccc--cccc--CC--ccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIT--SSAT--DP--ATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~--~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
+|.. .|++++|+|++++|++++.||.|++||+.++.. .... .. ........... .+..+..++.+.+|+..
T Consensus 95 ~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 95 NRDN-YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK--VCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp CTTS-BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS--EEEEEETTSCEEEEETT
T ss_pred CCCC-cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC--EEEEEeCCCcEEEEeCC
Confidence 6887 899999999999999999999999999987641 1111 11 11111111111 22234457889999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
+.+.+..+..|...|.+++|+|++ .+|++++.||.|++||+++++ ....+ .+...+.+++|+| +++++++++.++
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~--~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~~~ 246 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGR--QLQQH-DFTSQIFSLGYCP-TGEWLAVGMESS 246 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--EEEEE-ECSSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCceeeeeecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCc--eEeee-cCCCceEEEEECC-CCCEEEEEcCCC
Confidence 999999999999999999999998 889999999999999998876 34443 5778899999999 999999999999
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH 239 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.|++||+++ .+ ...+..|...|.+++|+|++++ +++++.||.|++||++.. ..+ ..
T Consensus 247 ~i~~~~~~~------~~-~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~~~~~~---------------~~~-~~ 302 (337)
T 1gxr_A 247 NVEVLHVNK------PD-KYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPYG---------------ASI-FQ 302 (337)
T ss_dssp CEEEEETTS------SC-EEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTC---------------CEE-EE
T ss_pred cEEEEECCC------CC-eEEEcCCccceeEEEECCCCCE-EEEecCCCcEEEEECCCC---------------eEE-EE
Confidence 999999997 44 3467788999999999999996 679999999999999872 222 22
Q ss_pred cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 240 AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 240 ~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..|...|.+++|+|++.+++ +++.||.|++|++.
T Consensus 303 ~~~~~~v~~~~~s~~~~~l~--------~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 303 SKESSSVLSCDISVDDKYIV--------TGSGDKKATVYEVI 336 (337)
T ss_dssp EECSSCEEEEEECTTSCEEE--------EEETTSCEEEEEEE
T ss_pred ecCCCcEEEEEECCCCCEEE--------EecCCCeEEEEEEe
Confidence 45788999999999888655 44455999999974
No 90
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=230.07 Aligned_cols=219 Identities=20% Similarity=0.344 Sum_probs=177.5
Q ss_pred cccCCCCCcceEEEEECCC--CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT--EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~--~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
+.+.+|.+ .|++++|+|+ +++|++|+.||.|++||+.++.
T Consensus 49 ~~~~~h~~-~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~------------------------------------- 90 (379)
T 3jrp_A 49 DTLTGHEG-PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR------------------------------------- 90 (379)
T ss_dssp EEECCCSS-CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE-------------------------------------
T ss_pred eEecCCCC-cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc-------------------------------------
Confidence 46789998 8999999987 9999999999999999997531
Q ss_pred CcCcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC----------
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL---------- 147 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---------- 147 (309)
......+..|...|.+++|+|+ + .+|++++.||.|++||++.........+..|...|.+++|+|.
T Consensus 91 -~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 91 -WSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp -EEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred -eeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 1134556678999999999998 6 8899999999999999988755456677889999999999994
Q ss_pred --CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecC---CCcEEEEecCCCcEEEEeCCcccccc
Q 021657 148 --DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD---KSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 148 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
++.+|++++.||.|++||++..... ...+..+.+|...|.+++|+|+ +. ++++++.||.|++||++......
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~ 245 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQT--YVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPW 245 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTE--EEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTSCC
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcc--eeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCccc
Confidence 4899999999999999999873210 1245677889999999999999 66 57799999999999998732111
Q ss_pred cCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 223 EQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...+.....|...|.+++|+|++.+++ +++.||.|++|++.
T Consensus 246 ----------~~~~~~~~~~~~~v~~~~~s~~g~~l~--------~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 246 ----------KKTLLKEEKFPDVLWRASWSLSGNVLA--------LSGGDNKVTLWKEN 286 (379)
T ss_dssp ----------EEEESSSSCCSSCEEEEEECSSSCCEE--------EEESSSSEEEEEEE
T ss_pred ----------eeeeeccccCCCcEEEEEEcCCCCEEE--------EecCCCcEEEEeCC
Confidence 122334455888999999999988765 44445999999998
No 91
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.8e-34 Score=230.06 Aligned_cols=235 Identities=18% Similarity=0.350 Sum_probs=177.3
Q ss_pred cccCCCCCcceEEEEECC--CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCP--TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
+.+.+|.+ .|++++|+| ++++|++|+.||.|++||++.+..... ..
T Consensus 51 ~~~~~~~~-~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~-------------------------------~~ 98 (351)
T 3f3f_A 51 DSWRAHDS-SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS-------------------------------GR 98 (351)
T ss_dssp EEEECCSS-CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS-------------------------------SC
T ss_pred ceeccCCC-cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc-------------------------------cc
Confidence 35678998 899999999 699999999999999999985422110 01
Q ss_pred CcCcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEE-----------eeccCCceeEEEecc
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKV-----------EKAHDADLHCVDWNP 146 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----------~~~~~~~v~~~~~~~ 146 (309)
..+.+..+..|...|.+++|+|+ + .+|++++.||.|++||+++++...... ...|...+.+++|+|
T Consensus 99 ~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 177 (351)
T 3f3f_A 99 RWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP 177 (351)
T ss_dssp SEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECC
T ss_pred CcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEecc
Confidence 12345667789999999999998 7 889999999999999998776321111 125778999999999
Q ss_pred CC---CCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCC---cEEEEecCCCcEEEEeCCcccc
Q 021657 147 LD---DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS---SVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 147 ~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
+ +.++++++.++.+.+|+..... ...+..+.+|...|++++|+|++. .+|++++.||.|++||++....
T Consensus 178 -~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 252 (351)
T 3f3f_A 178 -SRFSPEKLAVSALEQAIIYQRGKDGK----LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLS 252 (351)
T ss_dssp -CSSSCCEEEEEETTEEEEEEECTTSC----EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-
T ss_pred -CCCCCcEEEEecCCCcEEEEccCCCc----eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcC
Confidence 6 8999999999999888877621 223778888999999999999982 3678999999999999987322
Q ss_pred cccCCCCC-------------------------------cCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCC
Q 021657 221 KVEQGPRT-------------------------------TNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDST 269 (309)
Q Consensus 221 ~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~ 269 (309)
........ .......+..+.+|...|++++|+|++.+++ +|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~--------s~ 324 (351)
T 3f3f_A 253 PLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS--------SA 324 (351)
T ss_dssp --------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE--------EE
T ss_pred ccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE--------Ee
Confidence 11110000 0011246677889999999999999887655 44
Q ss_pred CCCCeEEEEEccc
Q 021657 270 GGGGTLQIWRMSD 282 (309)
Q Consensus 270 ~~dg~v~vw~~~~ 282 (309)
+.||.|++|++..
T Consensus 325 ~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 325 GDDGKVRLWKATY 337 (351)
T ss_dssp ETTSCEEEEEECT
T ss_pred cCCCcEEEEecCc
Confidence 5559999999983
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=234.12 Aligned_cols=245 Identities=13% Similarity=0.070 Sum_probs=181.4
Q ss_pred CCCCCcceEEEEECCCCCEE-EEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 5 TGHQDNAEFALAMCPTEPYV-LSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l-~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
.+|.+ .|++++|+|++++| ++|+.||.|+|||+... +.+.
T Consensus 99 ~~~~~-~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~--------------------------------------~~~~ 139 (450)
T 2vdu_B 99 PPIYS-YIRNLRLTSDESRLIACADSDKSLLVFDVDKT--------------------------------------SKNV 139 (450)
T ss_dssp -CCCC-CEEEEEECTTSSEEEEEEGGGTEEEEEEECSS--------------------------------------SSSC
T ss_pred CccCC-ceEEEEEcCCCCEEEEEECCCCeEEEEECcCC--------------------------------------CCce
Confidence 46776 79999999999996 89999999999998710 1122
Q ss_pred ccccc--cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCCceeEEEeccCC---CCeEEEEc
Q 021657 84 RGIYN--GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNPLD---DNLILTGS 156 (309)
Q Consensus 84 ~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~ 156 (309)
+..+. .|...|++++|+|++ .+|++|+.||.|++|++.+++.. ....+.+|...|++++|+| + +.+|++++
T Consensus 140 ~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~ 217 (450)
T 2vdu_B 140 LKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSD 217 (450)
T ss_dssp EEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEE
T ss_pred eeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEc
Confidence 33343 567889999999998 88999999999999999877632 2235678999999999999 8 88999999
Q ss_pred CCCcEEEEecCCCCCCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc------
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT------ 229 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~------ 229 (309)
.|+.|++||+++ ++.+.. +.+|...|.+++|+ ++.+ |++++.|+.|++||++.............
T Consensus 218 ~d~~i~vwd~~~------~~~~~~~~~~h~~~v~~~~~s-d~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 218 RDEHIKISHYPQ------CFIVDKWLFGHKHFVSSICCG-KDYL-LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLN 289 (450)
T ss_dssp TTSCEEEEEESC------TTCEEEECCCCSSCEEEEEEC-STTE-EEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCC
T ss_pred CCCcEEEEECCC------CceeeeeecCCCCceEEEEEC-CCCE-EEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhh
Confidence 999999999998 777776 56899999999999 8885 67999999999999987322111000000
Q ss_pred --C-CCCc-eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc--cccccCChhhHhHhhhcccceEE
Q 021657 230 --N-YPAG-LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM--SDLIYRPQDEVLAELEKFKAHVI 303 (309)
Q Consensus 230 --~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~--~~~~~~~~~~~~~~~~~h~~~v~ 303 (309)
. .+.. ...........|.+++|+|++.++++++..| +.|++|++ ... ...+++..+..| +.|.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d-------~~i~iw~~~~~~~---~~l~~~~~~~~~-~~v~ 358 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT-------KCIIILEMSEKQK---GDLALKQIITFP-YNVI 358 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECSSSSEEEEEETTC-------SEEEEEEECSSST---TCEEEEEEEECS-SCEE
T ss_pred hcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC-------CeEEEEEeccCCC---CceeeccEeccC-CceE
Confidence 0 0000 0000012345789999999998877544344 99999999 310 012566677777 8899
Q ss_pred EeeeCC
Q 021657 304 SCTSKP 309 (309)
Q Consensus 304 ~~~~~P 309 (309)
+++|+|
T Consensus 359 ~~~~~~ 364 (450)
T 2vdu_B 359 SLSAHN 364 (450)
T ss_dssp EEEEET
T ss_pred EEEecC
Confidence 999987
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.6e-34 Score=236.73 Aligned_cols=241 Identities=22% Similarity=0.384 Sum_probs=188.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+.+|.+ .|++++| ++++|++|+.||+|++||+.++......... ....... ..+..+..++.+.+|+
T Consensus 167 ~~~~~h~~-~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 167 RILTGHTG-SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN----GMMVTCSKDRSIAVWD 239 (435)
T ss_dssp EEECCCSS-CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT----TEEEEEETTSCEEEEE
T ss_pred EEEcCCCC-cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC----CEEEEeeCCCcEEEEe
Confidence 46789998 8999998 7889999999999999999887443322211 1111111 1334455688999999
Q ss_pred CCCcCcc---cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 78 GPSVGPR---GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 78 ~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
..+.... ..+.+|...|.+++| ++ .++++|+.||.|++||+++++ ....+.+|...|.+++++ +.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~---~~~l~~ 311 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCE--FVRTLNGHKRGIACLQYR---DRLVVS 311 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEEE---TTEEEE
T ss_pred CCCCCCceeeeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCc--EEEEEcCCCCcEEEEEeC---CCEEEE
Confidence 9887765 677899999999999 44 689999999999999999887 778888999999999984 579999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
|+.||.|++||+++ ++.+..+.+|...|.+++| ++.+ +++|+.||.|++||++........ ....
T Consensus 312 g~~dg~i~iwd~~~------~~~~~~~~~h~~~v~~~~~--~~~~-l~sg~~dg~i~vwd~~~~~~~~~~------~~~~ 376 (435)
T 1p22_A 312 GSSDNTIRLWDIEC------GACLRVLEGHEELVRCIRF--DNKR-IVSGAYDGKIKVWDLVAALDPRAP------AGTL 376 (435)
T ss_dssp EETTSCEEEEETTT------CCEEEEECCCSSCEEEEEC--CSSE-EEEEETTSCEEEEEHHHHTSTTSC------TTTT
T ss_pred EeCCCeEEEEECCC------CCEEEEEeCCcCcEEEEEe--cCCE-EEEEeCCCcEEEEECCCCCCcccc------ccch
Confidence 99999999999999 8899999999999999999 5664 679999999999999873322110 1122
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+..+.+|...|.+++| ++..+ + +|+.||.|++||+.+
T Consensus 377 ~~~~~~~h~~~v~~l~~--~~~~l-~-------s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 377 CLRTLVEHSGRVFRLQF--DEFQI-V-------SSSHDDTILIWDFLN 414 (435)
T ss_dssp EEEEECCCSSCCCCEEE--CSSCE-E-------ECCSSSEEEEEC---
T ss_pred heeeccCCCCCeEEEEe--CCCEE-E-------EEeCCCEEEEEECCC
Confidence 56778899999999999 35554 4 555669999999983
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-33 Score=234.12 Aligned_cols=258 Identities=21% Similarity=0.323 Sum_probs=205.7
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.|++|.+..++++.+ ++++|++|+.||+|++||+.++......................+..+..++.+.+|+..+.
T Consensus 112 ~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 112 KVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred EEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcC
Confidence 4688999955666555 68999999999999999998775443332111100000000113444567889999999999
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+.+..+.+|...|.++.|++ ..+++|+.||.|++||+.+++ ....+.+|...|.+++| ++.++++|+.||.|
T Consensus 190 ~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i 261 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQ--CLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMV 261 (445)
T ss_dssp EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCC--EEEEEECCSSCEEEEEE---CSSCEEEEETTSCE
T ss_pred cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCc--EEEEEcCCcccEEEEEE---CCCEEEEEcCCCEE
Confidence 99999999999999999964 569999999999999999887 67788899999999999 57899999999999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++||+++ ++.+..+.+|...|.+++| ++.+ +++++.|+.|++||++. ...+..+.+
T Consensus 262 ~iwd~~~------~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~d~~i~i~d~~~---------------~~~~~~~~~ 317 (445)
T 2ovr_B 262 KVWDPET------ETCLHTLQGHTNRVYSLQF--DGIH-VVSGSLDTSIRVWDVET---------------GNCIHTLTG 317 (445)
T ss_dssp EEEEGGG------TEEEEEECCCSSCEEEEEE--CSSE-EEEEETTSCEEEEETTT---------------CCEEEEECC
T ss_pred EEEECCC------CcEeEEecCCCCceEEEEE--CCCE-EEEEeCCCeEEEEECCC---------------CCEEEEEcC
Confidence 9999998 8899999999999999999 6665 67999999999999987 445667788
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc---ccceEEEeeeCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK---FKAHVISCTSKP 309 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~P 309 (309)
|...+.++.+++ . ++++++. ||.|++||+. +++++..+.. |...|.+++|+|
T Consensus 318 ~~~~v~~~~~~~--~-~l~~~~~-------dg~i~vwd~~------~~~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 318 HQSLTSGMELKD--N-ILVSGNA-------DSTVKIWDIK------TGQCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp CCSCEEEEEEET--T-EEEEEET-------TSCEEEEETT------TCCEEEEECSTTSCSSCEEEEEECS
T ss_pred CcccEEEEEEeC--C-EEEEEeC-------CCeEEEEECC------CCcEEEEEccCCCCCCCEEEEEECC
Confidence 999999988864 4 4554444 4999999998 5666777765 888999999875
No 95
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1e-34 Score=237.26 Aligned_cols=247 Identities=15% Similarity=0.145 Sum_probs=164.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+....+++++.+|++|+.|++|+|||++.+... ....+..+.+|
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~-----------------------------------~~~~~~~~~gH 135 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETII-----------------------------------TQHVLGGKSGH 135 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEE-----------------------------------EEEEECTTTSC
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccc-----------------------------------eeeeecccCCC
Confidence 3444455556778999999999999998754221 11224567899
Q ss_pred cCCeEEEEEec--------CCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 91 EDTVEDVTFCP--------SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 91 ~~~v~~~~~~~--------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
.+.|++++|+| ++ ++|++|+.|++|+|||++++. .......|...+.+++|+|.+..+|++++.|++|+
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~--~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEG--PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTE--EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCc--eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 99999999998 56 899999999999999998776 56666788999999999993346899999999999
Q ss_pred EEecCCCCCCCCC-------------------CceeeeccCCCCeeEEEEe-cCCCcEEEEecCCCcEEEEeCCcccccc
Q 021657 163 MFDRRNLTSNGVG-------------------SPINKFEGHSAAVLCVQWS-PDKSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 163 i~d~~~~~~~~~~-------------------~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
+||+++.+..... .......+|...+.++.|+ |++.. +++++.|+.+++||+.......
T Consensus 213 ~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~-l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 213 IFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSG-ILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp EEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCE-EEEECTTSEEEEEEC-------
T ss_pred EEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCE-EEEEeCCCCEEEEECccCCCCc
Confidence 9999874321000 0001123567788999987 78885 5699999999999998632221
Q ss_pred cCCCCCcC----CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcc
Q 021657 223 EQGPRTTN----YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKF 298 (309)
Q Consensus 223 ~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h 298 (309)
........ ...........+...+..+.+.+.+..++++++.| |.|++||+. +++++..+.+|
T Consensus 292 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D-------g~V~lwd~~------~~~~~~~~~~~ 358 (393)
T 4gq1_A 292 EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH-------GLIQLINTY------EKDSNSIPIQL 358 (393)
T ss_dssp ------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT-------TEEEEEETT------CTTCCEEEEEC
T ss_pred eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCC-------CEEEEEECC------CCcEEEEecCC
Confidence 11100000 00001112222333334444444556677766655 999999998 67777778889
Q ss_pred cceEEEeeeCC
Q 021657 299 KAHVISCTSKP 309 (309)
Q Consensus 299 ~~~v~~~~~~P 309 (309)
..+|.+++|+|
T Consensus 359 ~~~V~svafsp 369 (393)
T 4gq1_A 359 GMPIVDFCWHQ 369 (393)
T ss_dssp SSCEEEEEECT
T ss_pred CCcEEEEEEcC
Confidence 99999999998
No 96
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.1e-34 Score=237.07 Aligned_cols=258 Identities=17% Similarity=0.300 Sum_probs=201.0
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCcc--ccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT--AKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+|.. .|+++++ ++++|++|+.||.|++||+.++.......... ...... ....+..+..++.+.+|+..+.+.
T Consensus 131 ~~~~-~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 131 ETSK-GVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp SSCC-CEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred CCCC-cEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 4555 6888877 78999999999999999998764433222111 111111 112334456789999999999999
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc-eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP-VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
+..+.+|...|.+++|++ ..+++|+.||.|++||+.++... ....+.+|...|.+++| +++++++|+.||.|+
T Consensus 206 ~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIK 279 (435)
T ss_dssp EEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEE
T ss_pred EEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEE
Confidence 999999999999999964 47999999999999999877632 22567789999999999 568999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+||+++ ++.+..+.+|...|.+++++ +. ++++|+.||.|++||+++ ...+..+.+|
T Consensus 280 vwd~~~------~~~~~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~---------------~~~~~~~~~h 335 (435)
T 1p22_A 280 VWNTST------CEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIEC---------------GACLRVLEGH 335 (435)
T ss_dssp EEETTT------CCEEEEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTT---------------CCEEEEECCC
T ss_pred EEECCc------CcEEEEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCC---------------CCEEEEEeCC
Confidence 999999 88999999999999999995 44 567999999999999987 4456778899
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC---ChhhHhHhhhcccceEEEeeeC
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR---PQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
...|.+++|+ +.. +++++. ||.|++||+...... ....++..+.+|.+.|.+++|.
T Consensus 336 ~~~v~~~~~~--~~~-l~sg~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 394 (435)
T 1p22_A 336 EELVRCIRFD--NKR-IVSGAY-------DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 394 (435)
T ss_dssp SSCEEEEECC--SSE-EEEEET-------TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC
T ss_pred cCcEEEEEec--CCE-EEEEeC-------CCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC
Confidence 9999999993 444 554444 499999999832100 0011677788999999998874
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=232.10 Aligned_cols=241 Identities=12% Similarity=0.106 Sum_probs=172.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc-c
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN-G 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 89 (309)
-|.+++|+|||+++||++.|++|+ |.+.+... .. .......+...+.+ ....|+..+.+....+. .
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l-~g------h~~~v~~V~FsPdg----~~~~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI-NC------NSKNLFHVKEFPLE----FENKLDFELAQQNGLLNSQ 83 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEE--EECCCSCC-SS------BGGGTEEEEEECCC----CCCTTTTSCCCSSCSSTTS
T ss_pred cEEEEEECCCCCEEEEEcCCceee--ccccccee-cC------CCccEEEEEECCCC----CcceEEEEeCCCceEeecC
Confidence 588999999999999999999999 64433211 00 11111122222222 34444444333322332 4
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCC-----ceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA-----DLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
|...|.+++|+|+| ..||+++.||.|++||... ....+. |.. .+.+++|+| ++++|++|+.||+|++|
T Consensus 84 ~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 84 PVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFF 156 (588)
T ss_dssp CSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEE
T ss_pred CCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEE
Confidence 58899999999999 8899999999999999533 344455 554 599999999 99999999999999999
Q ss_pred ecCCCCCCCCCC-------ceeee----ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 165 DRRNLTSNGVGS-------PINKF----EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 165 d~~~~~~~~~~~-------~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
|+.. +. .+.++ .+|...|.+++|+|+| + ++++.|+.|++||+..... .
T Consensus 157 d~~~------~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L-aass~D~tVrlWd~~~~~~------------~ 215 (588)
T 2j04_A 157 SIRK------NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L-VAALSNNSVFSMTVSASSH------------Q 215 (588)
T ss_dssp ECCC------CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E-EEEETTCCEEEECCCSSSS------------C
T ss_pred ECCC------CccccccceeeeeeecccccccccEEEEEEcCCc--E-EEEeCCCeEEEEECCCCcc------------c
Confidence 9987 43 25665 6677899999999999 4 5777899999999987221 0
Q ss_pred ceeeee-cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee--CC
Q 021657 234 GLFFQH-AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS--KP 309 (309)
Q Consensus 234 ~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~P 309 (309)
.....+ .+|...|.+++|+ +.. +|+++ |++|++||+. .++......+|.+.|.+++| +|
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g~~-LASa~--------~~tIkLWd~~------~~~~~~~~~gh~~~V~~va~~~s~ 277 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--DYK-VVLTC--------PGYVHKIDLK------NYSISSLKTGSLENFHIIPLNHEK 277 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--TTE-EEEEC--------SSEEEEEETT------TTEEEEEECSCCSCCCEEEETTCS
T ss_pred cceeeecccccCcEEEEEEE--CCE-EEEEe--------CCeEEEEECC------CCeEEEEEcCCCceEEEEEeeeCC
Confidence 112334 4788999999999 555 44333 3899999998 44442223379999999998 65
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-33 Score=222.76 Aligned_cols=236 Identities=18% Similarity=0.212 Sum_probs=187.3
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccc---c--CC--ccccccCCCCceeecCCCCCCCCcc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA---T--DP--ATAKSAGSSGSIIKQSPKPGDGNDK 74 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~---~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (309)
+.+.+|.+ .|.+++|+|++++|++++.||.|++|++........ . .. ...... . ...+..+..++.+.
T Consensus 53 ~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 53 TVVYTGQG-FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--Q--DGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEECSS-CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--E--TTEEEEEETTSEEE
T ss_pred EEeecCCc-cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--c--CCEEEEEeCCCCEE
Confidence 34667887 899999999999999999999999999876421111 0 00 011111 1 11233345678889
Q ss_pred cCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-cCCceeEEEeccCCCCeEE
Q 021657 75 AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~ 153 (309)
+|+ ..+....+..|...+.++.|.|....++++++.||.|++||. .+ ....+.. |...+.+++|+| ++. ++
T Consensus 128 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~--~~~~~~~~~~~~i~~~~~~~-~~~-~~ 199 (313)
T 3odt_A 128 VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DK--VIKTFSGIHNDVVRHLAVVD-DGH-FI 199 (313)
T ss_dssp EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TE--EEEEECSSCSSCEEEEEEEE-TTE-EE
T ss_pred EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--Cc--eEEEEeccCcccEEEEEEcC-CCe-EE
Confidence 998 666777888999999999999933388999999999999993 22 3445555 889999999999 777 99
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
+++.||.|++||+++ ++.+..+..|...|++++|+|++. +++++.||.|++||++. .
T Consensus 200 ~~~~dg~i~i~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~---------------~ 256 (313)
T 3odt_A 200 SCSNDGLIKLVDMHT------GDVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKEN---------------G 256 (313)
T ss_dssp EEETTSEEEEEETTT------CCEEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTT---------------C
T ss_pred EccCCCeEEEEECCc------hhhhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCC---------------C
Confidence 999999999999998 889999999999999999999994 56899999999999987 3
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.....+..|...|.+++|+|++. ++ +++.| |.|++||+..
T Consensus 257 ~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~d-------g~i~iw~~~~ 296 (313)
T 3odt_A 257 SLKQVITLPAISIWSVDCMSNGD-II-VGSSD-------NLVRIFSQEK 296 (313)
T ss_dssp CEEEEEECSSSCEEEEEECTTSC-EE-EEETT-------SCEEEEESCG
T ss_pred ceeEEEeccCceEEEEEEccCCC-EE-EEeCC-------CcEEEEeCCC
Confidence 45667788999999999999887 44 34444 9999999983
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.5e-35 Score=270.40 Aligned_cols=263 Identities=19% Similarity=0.297 Sum_probs=209.4
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC--------------------------------
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-------------------------------- 49 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-------------------------------- 49 (309)
..+.+|.+ .|++++|+|++++|++++.||.|++|++.+.........
T Consensus 876 ~~~~~h~~-~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1249)
T 3sfz_A 876 ADCRGHLS-WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTG 954 (1249)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSC
T ss_pred eecCCCcc-ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcc
Confidence 45789998 899999999999999999999999999764311100000
Q ss_pred ---------ccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEE
Q 021657 50 ---------ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 120 (309)
Q Consensus 50 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd 120 (309)
.......... ..+..+..++.+.+|+..+.+....+.+|...|++++|+|++ .+|++++.||.|++||
T Consensus 955 ~~~~~~~~~i~~~~~sp~g--~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~i~vwd 1031 (1249)
T 3sfz_A 955 QIDYLPEAQVSCCCLSPHL--EYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADG-KTLISSSEDSVIQVWN 1031 (1249)
T ss_dssp CEEEECCSCEEEEEECTTS--SEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSS-SCEEEECSSSBEEEEE
T ss_pred eEEEcccCcEEEEEEcCCC--CEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCC-CEEEEEcCCCEEEEEE
Confidence 0000001111 122234567889999999999999999999999999999998 7899999999999999
Q ss_pred cCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcE
Q 021657 121 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 200 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 200 (309)
+.+++ ......|...|.+++|+| + ..+++++.||.|++||+.+ ++.+..+.+|...|.+++|+|+++.
T Consensus 1032 ~~~~~---~~~~~~~~~~v~~~~~~~-~-~~l~~~~~dg~v~vwd~~~------~~~~~~~~~~~~~v~~~~~s~d~~~- 1099 (1249)
T 3sfz_A 1032 WQTGD---YVFLQAHQETVKDFRLLQ-D-SRLLSWSFDGTVKVWNVIT------GRIERDFTCHQGTVLSCAISSDATK- 1099 (1249)
T ss_dssp TTTTE---EECCBCCSSCEEEEEECS-S-SEEEEEESSSEEEEEETTT------TCCCEEEECCSSCCCCEEECSSSSS-
T ss_pred CCCCc---eEEEecCCCcEEEEEEcC-C-CcEEEEECCCcEEEEECCC------CceeEEEcccCCcEEEEEECCCCCE-
Confidence 98876 334568999999999999 4 4678889999999999999 8889999999999999999999997
Q ss_pred EEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 201 FGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 201 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
+++++.|+.|++||+.. ...+..+.+|...|++++|+|++.+++ +|+.||.|++||+
T Consensus 1100 l~s~s~d~~v~iwd~~~---------------~~~~~~l~~h~~~v~~~~~s~dg~~la--------t~~~dg~i~vwd~ 1156 (1249)
T 3sfz_A 1100 FSSTSADKTAKIWSFDL---------------LSPLHELKGHNGCVRCSAFSLDGILLA--------TGDDNGEIRIWNV 1156 (1249)
T ss_dssp CEEECCSSCCCEECSSS---------------SSCSBCCCCCSSCEEEEEECSSSSEEE--------EEETTSCCCEEES
T ss_pred EEEEcCCCcEEEEECCC---------------cceeeeeccCCCcEEEEEECCCCCEEE--------EEeCCCEEEEEEC
Confidence 56999999999999987 334556778999999999999887655 4445599999999
Q ss_pred cccccCChhhHhHhh---------hcccceEEEeeeCC
Q 021657 281 SDLIYRPQDEVLAEL---------EKFKAHVISCTSKP 309 (309)
Q Consensus 281 ~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~P 309 (309)
.. ++++..+ .+|.+.|.+++|+|
T Consensus 1157 ~~------~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~ 1188 (1249)
T 3sfz_A 1157 SD------GQLLHSCAPISVEEGTATHGGWVTDVCFSP 1188 (1249)
T ss_dssp SS------SCCCCCCCCCC-------CCSCCCEEEECT
T ss_pred CC------CceEEEeccccccccccccCceEEEEEECC
Confidence 84 4444333 67999999999987
No 100
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-34 Score=234.28 Aligned_cols=248 Identities=14% Similarity=0.194 Sum_probs=186.3
Q ss_pred CCCcceEEEEECCC----CCEEEEecCCCcEEEEeCCccccccccCC----ccccccCC-CCceeecCCCCCCCCcccCC
Q 021657 7 HQDNAEFALAMCPT----EPYVLSGGKDKSVVLWSIQDHITSSATDP----ATAKSAGS-SGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 7 H~~~~V~~~~~~~~----~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 77 (309)
|.. .|++++|+|+ +++|++|+.||.|++||+.++........ ........ .. ..+..+..++.+.+|+
T Consensus 68 ~~~-~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 68 ADE-NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP--NLLLSVSKDHALRLWN 144 (366)
T ss_dssp TTC-CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT--TEEEEEETTSCEEEEE
T ss_pred CCC-cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC--CEEEEEeCCCeEEEEE
Confidence 555 7999999998 67999999999999999987643332221 11111111 11 1223345588999999
Q ss_pred CCCcCccccc---ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--------------------------e
Q 021657 78 GPSVGPRGIY---NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--------------------------V 128 (309)
Q Consensus 78 ~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--------------------------~ 128 (309)
..+.+.+..+ .+|...|.+++|+|++ .+|++++.||.|++||+++++.. .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred eecCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 9998888777 7899999999999998 88999999999999999865411 1
Q ss_pred EEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCC--------CCCCceeeeccCCCCeeEEEEecC--CC
Q 021657 129 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN--------GVGSPINKFEGHSAAVLCVQWSPD--KS 198 (309)
Q Consensus 129 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~--~~ 198 (309)
......|...|.+++|+ ++++++++.|+.|++||+++.... .....+..+..|...|++++|+|+ +.
T Consensus 224 ~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 300 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK 300 (366)
T ss_dssp EEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS
T ss_pred cccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc
Confidence 22233489999999997 569999999999999999873210 001347778888999999999999 88
Q ss_pred cEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC--CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEE
Q 021657 199 SVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH--RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQ 276 (309)
Q Consensus 199 ~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~ 276 (309)
+ +++|+.||.|++||++..... ......+.+| ...|++++|+|++.+++ +++.||.|+
T Consensus 301 ~-l~~~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~--------s~~~dg~i~ 360 (366)
T 3k26_A 301 M-LALGNQVGKLYVWDLEVEDPH-----------KAKCTTLTHHKCGAAIRQTSFSRDSSILI--------AVCDDASIW 360 (366)
T ss_dssp E-EEEECTTSCEEEEECCSSSGG-----------GCEEEEECCTTCCSCEEEEEECTTSSEEE--------EEETTSEEE
T ss_pred E-EEEEecCCcEEEEECCCCCCc-----------cccceEEcccccCCceEEEEeCCCCCeEE--------EEeCCCEEE
Confidence 5 679999999999999873221 1133456666 78999999999887655 444559999
Q ss_pred EEEcc
Q 021657 277 IWRMS 281 (309)
Q Consensus 277 vw~~~ 281 (309)
+||+.
T Consensus 361 iwd~~ 365 (366)
T 3k26_A 361 RWDRL 365 (366)
T ss_dssp EEEC-
T ss_pred EEEec
Confidence 99986
No 101
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.4e-33 Score=228.78 Aligned_cols=242 Identities=17% Similarity=0.191 Sum_probs=180.0
Q ss_pred CCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 5 TGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
.+|.+ .|++++|+| ++.+|++++.|+.|++||+.+... ..
T Consensus 115 ~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--------------------------------------~~ 155 (383)
T 3ei3_B 115 MGPGD-AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI--------------------------------------QV 155 (383)
T ss_dssp CSTTC-BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE--------------------------------------EE
T ss_pred CCcCC-ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce--------------------------------------EE
Confidence 47998 899999999 789999999999999999974210 11
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCC-eEEEEcCCCcEE
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN-LILTGSADNSVR 162 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~ 162 (309)
......|...|.+++|+|++ .+|++|+.|+.|++||++ ++ ....+..|...|.+++|+| ++. +|++++.|+.|+
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~--~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLD-GH--EIFKEKLHKAKVTHAEFNP-RCDWLMATSSVDATVK 230 (383)
T ss_dssp EECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETT-SC--EEEEEECSSSCEEEEEECS-SCTTEEEEEETTSEEE
T ss_pred EeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECC-CC--EEEEeccCCCcEEEEEECC-CCCCEEEEEeCCCEEE
Confidence 11223456889999999998 889999999999999994 44 5777889999999999999 777 999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEec-CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
+||+++.... ...+..+ .|...|.+++|+| ++.+ +++++.|+.|++||++........... ......
T Consensus 231 iwd~~~~~~~--~~~~~~~-~~~~~v~~~~~s~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~--------~~~~~~ 298 (383)
T 3ei3_B 231 LWDLRNIKDK--NSYIAEM-PHEKPVNAAYFNPTDSTK-LLTTDQRNEIRVYSSYDWSKPDQIIIH--------PHRQFQ 298 (383)
T ss_dssp EEEGGGCCST--TCEEEEE-ECSSCEEEEEECTTTSCE-EEEEESSSEEEEEETTBTTSCSEEEEC--------CBCCCT
T ss_pred EEeCCCCCcc--cceEEEe-cCCCceEEEEEcCCCCCE-EEEEcCCCcEEEEECCCCccccccccc--------cccccc
Confidence 9999973211 2344445 6899999999999 9985 679999999999999873322110000 001122
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCC-CCCCCCeEEEEEccccccCChhhHhHhhhc--ccceEEEeeeCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCD-STGGGGTLQIWRMSDLIYRPQDEVLAELEK--FKAHVISCTSKP 309 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~-s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~P 309 (309)
|...+. +.|+|++..+.++.+.|.. +|+.|+.|++||+. +++++.++.+ |.+.+..++|+|
T Consensus 299 ~~~~~~-~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~------~~~~~~~l~~~~~~~~~~~~~~s~ 362 (383)
T 3ei3_B 299 HLTPIK-ATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDAN------SGGLVHQLRDPNAAGIISLNKFSP 362 (383)
T ss_dssp TSCCCC-CEECSSSSEEEEECBCCTTTCTTCCCCEEEEETT------TCCEEEEECBTTBCSCCCEEEECT
T ss_pred cccceE-EeccCCCCceEEEecCCcccccCCCCeEEEEecC------CCceeeeecCCCCCceEEEEEEec
Confidence 344444 4667666655554433211 55677999999998 6777888876 456777779987
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-34 Score=253.89 Aligned_cols=193 Identities=10% Similarity=0.029 Sum_probs=139.7
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce--EEE--ee-----ccCCceeEEEeccCCCCeEEEEcCCCc
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV--IKV--EK-----AHDADLHCVDWNPLDDNLILTGSADNS 160 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~--~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg~ 160 (309)
|...+..++|+|++ .+|++|+.|++|++||+.++.... ... +. +|...|.+++|+| ++++||+|+.||+
T Consensus 434 ~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafsp-dg~~LAsgs~Dgt 511 (902)
T 2oaj_A 434 GVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA-ETLELAVSIETGD 511 (902)
T ss_dssp SBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEET-TTTEEEEEETTSC
T ss_pred CcCCCCcccccccC-cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecC-CCCeEEEEecCcE
Confidence 33334444556777 899999999999999998775211 111 11 7889999999999 9999999999999
Q ss_pred EEEEecCCCCCCC-------C--------------------------------CCceeeeccCCCCeeEEEEecCCCcEE
Q 021657 161 VRMFDRRNLTSNG-------V--------------------------------GSPINKFEGHSAAVLCVQWSPDKSSVF 201 (309)
Q Consensus 161 i~i~d~~~~~~~~-------~--------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~ 201 (309)
|++||+.+....+ . .+++..+.+|.+.|++|+|+|+| + |
T Consensus 512 V~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~-l 589 (902)
T 2oaj_A 512 VVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F-V 589 (902)
T ss_dssp EEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E-E
T ss_pred EEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E-E
Confidence 9999998631000 0 02467788899999999999999 5 7
Q ss_pred EEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec-CCCcceeeEEEc-----cCC--CeEEEEecCCCCCCCCCC
Q 021657 202 GSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA-GHRDKVVDFHWN-----ASD--PWTVVSVSDDCDSTGGGG 273 (309)
Q Consensus 202 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-----~~~--~~~~~s~s~d~~s~~~dg 273 (309)
|+|+.|++|+|||++....... ..+..+. +|...|++++|+ ||+ ...+++++.| +
T Consensus 590 Asgs~D~tv~lwd~~~~~~~~~----------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D-------~ 652 (902)
T 2oaj_A 590 GIAYAAGSLMLIDRRGPAIIYM----------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM-------G 652 (902)
T ss_dssp EEEETTSEEEEEETTTTEEEEE----------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT-------S
T ss_pred EEEeCCCcEEEEECCCCeEEEE----------eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC-------C
Confidence 8999999999999876211000 0112343 899999999999 886 3566655555 9
Q ss_pred eEEEEEccccccCChhhHhHhhhccc-----ceEEEee
Q 021657 274 TLQIWRMSDLIYRPQDEVLAELEKFK-----AHVISCT 306 (309)
Q Consensus 274 ~v~vw~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~ 306 (309)
+|++||+... .+++++.++.+|. ++|..++
T Consensus 653 tv~~wd~~p~---~~g~~~~~~~~~~~~~~~~~v~~i~ 687 (902)
T 2oaj_A 653 EVITYKILPA---SGGKFDVQLMDITNVTSKGPIHKID 687 (902)
T ss_dssp EEEEEEEEEC---GGGCEEEEEEEEEECCSSCCCCEEE
T ss_pred cEEEEEEecC---CCCcEEEEecCceecCCCCceEEEE
Confidence 9999999211 1566777777774 5666554
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-34 Score=229.10 Aligned_cols=233 Identities=9% Similarity=0.049 Sum_probs=164.6
Q ss_pred EECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC---------CcCcccc
Q 021657 16 AMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP---------SVGPRGI 86 (309)
Q Consensus 16 ~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 86 (309)
.+.+++.+|++|+.||+|++||++++................... +..+..++.+.+|+.. +.+.+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 344578899999999999999998774433222111111011111 3445566777777544 3333333
Q ss_pred cc-cccCCeEEEEEec--CCCcEEEEEcCCCeEEEEEcCCCCcceEEEe-eccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 87 YN-GHEDTVEDVTFCP--SSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 87 ~~-~~~~~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
+. +|...|.+++|+| ++ .+|++++.||.|++||+++++ ..... ..+...+.+++|+| ++.+|++|+.||.|+
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDS--QYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILD 195 (343)
T ss_dssp EECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSC--EEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEE
T ss_pred eecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCc--EEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEE
Confidence 32 6678999999999 88 889999999999999999887 34443 34566899999999 999999999999999
Q ss_pred EEecCCCCCCCCCCce-eeecc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 163 MFDRRNLTSNGVGSPI-NKFEG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+||+++ ++.+ ..+.. |..+|++++|+|++.+ +++++ |+.|++||++...... .+..+.
T Consensus 196 iwd~~~------~~~~~~~~~~~h~~~v~~l~fs~~g~~-l~s~~-~~~v~iwd~~~~~~~~------------~~~~~~ 255 (343)
T 3lrv_A 196 VYNLSS------PDQASSRFPVDEEAKIKEVKFADNGYW-MVVEC-DQTVVCFDLRKDVGTL------------AYPTYT 255 (343)
T ss_dssp EEESSC------TTSCCEECCCCTTSCEEEEEECTTSSE-EEEEE-SSBEEEEETTSSTTCB------------SSCCCB
T ss_pred EEECCC------CCCCccEEeccCCCCEEEEEEeCCCCE-EEEEe-CCeEEEEEcCCCCcce------------eecccc
Confidence 999998 6666 77887 9999999999999996 56777 5599999999833221 111222
Q ss_pred CCCccee--eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 GHRDKVV--DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~~~~~v~--~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.|...+. +++|+|++.++++.++. |+.+++|++..
T Consensus 256 ~~~~~~~~~~~~~~~~g~~l~~~s~~-------d~~i~v~~~~~ 292 (343)
T 3lrv_A 256 IPEFKTGTVTYDIDDSGKNMIAYSNE-------SNSLTIYKFDK 292 (343)
T ss_dssp C-----CCEEEEECTTSSEEEEEETT-------TTEEEEEEECT
T ss_pred cccccccceEEEECCCCCEEEEecCC-------CCcEEEEEEcc
Confidence 3444444 69999998876632222 48999999963
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.9e-33 Score=242.82 Aligned_cols=227 Identities=16% Similarity=0.263 Sum_probs=191.2
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
..|.+ .|++++|+|++++|++++ ++.|+|||++++.. ..+..
T Consensus 15 ~~~~~-~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~------------------------------------~~~~~ 56 (615)
T 1pgu_A 15 STQRN-FTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDS------------------------------------KVPPV 56 (615)
T ss_dssp CCCTT-CCCCCEEETTTTEEEEEE-TTEEEEEECCSSCC------------------------------------SSCSE
T ss_pred CCccC-ceeEEEECCCCCEEEEec-CCeEEEEECCCCCC------------------------------------ccccc
Confidence 35777 899999999999999998 88999999974200 01345
Q ss_pred cccccccCC-eEEEEEec--CCCcEEEEEcCCCeEEEEEcCCC------CcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 85 GIYNGHEDT-VEDVTFCP--SSAQEFCSVGDDSCLILWDARVG------TSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 85 ~~~~~~~~~-v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
..+.+|... |++++|+| ++ .+|++++.||.|++||+.++ +......+..|...|.+++|+| ++++|+++
T Consensus 57 ~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 134 (615)
T 1pgu_A 57 VQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVV 134 (615)
T ss_dssp EEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEE
T ss_pred eEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEe
Confidence 677889999 99999999 88 88999999999999999755 3336677788999999999999 99999999
Q ss_pred cCC----CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 156 SAD----NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 156 ~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
+.+ +.|++|| . ++.+..+..|...|.+++|+|++++++++++.|+.|++||++.
T Consensus 135 ~~~~~~~~~v~~~d--~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-------------- 192 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--S------GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-------------- 192 (615)
T ss_dssp ECCSSCSEEEEETT--T------CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT--------------
T ss_pred ccCCCCccEEEEEE--C------CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC--------------
Confidence 987 6888888 4 6688889999999999999999986678999999999999887
Q ss_pred CCceeeeecCCCc---ceeeEEEccC-CCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh-h---cccceEE
Q 021657 232 PAGLFFQHAGHRD---KVVDFHWNAS-DPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL-E---KFKAHVI 303 (309)
Q Consensus 232 ~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~-~---~h~~~v~ 303 (309)
...+..+.+|.. .|.+++|+|+ +.+ +++ ++.||.|++||+. +++++..+ . +|...|.
T Consensus 193 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~-------~~~dg~i~vwd~~------~~~~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 193 -FKFSASDRTHHKQGSFVRDVEFSPDSGEF-VIT-------VGSDRKISCFDGK------SGEFLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp -BEEEEEECSSSCTTCCEEEEEECSTTCCE-EEE-------EETTCCEEEEETT------TCCEEEECCBTTBCCCSCEE
T ss_pred -cceeeeecccCCCCceEEEEEECCCCCCE-EEE-------EeCCCeEEEEECC------CCCEeEEecccccccCCceE
Confidence 445667788988 9999999998 665 444 4445999999998 67777777 5 8999999
Q ss_pred EeeeC
Q 021657 304 SCTSK 308 (309)
Q Consensus 304 ~~~~~ 308 (309)
+++|+
T Consensus 258 ~~~~~ 262 (615)
T 1pgu_A 258 ALSWL 262 (615)
T ss_dssp EEEES
T ss_pred EEEEc
Confidence 99884
No 105
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.5e-32 Score=225.32 Aligned_cols=259 Identities=18% Similarity=0.246 Sum_probs=204.3
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc----C--CccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT----D--PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
++.|+|+++ ++|++|. |++|+|||..++...... . ............ .+..+..++.+.+|+..+.+.+.
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~--~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN--YLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC--EEEEEECCCeEEEEEcCCCcEEE
Confidence 567999975 4777665 999999999987433211 1 112222222222 33446678999999999999999
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
.+.+|...+.++.+++ .+|++|+.|+.+++||...... ....+.+|...+..+.|+| ++.++++++.|+.+++||
T Consensus 184 ~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~-~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 184 NMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccce-eeEEecccccceeeeeecC-CCCeeeeeeccccceEEe
Confidence 9999999999988854 6899999999999999887653 5677789999999999999 999999999999999999
Q ss_pred cCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEE--ecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS--SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
....... ...+.....|...|.+++|+|++..++++ |+.|+.|++||+++ ..+...+.. .
T Consensus 259 ~~~~~~~--~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t---------------~~~~~~~~~-~ 320 (420)
T 4gga_A 259 SAPGEGG--WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS---------------GACLSAVDA-H 320 (420)
T ss_dssp SSCCSSC--SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT---------------TEEEEEEEC-S
T ss_pred ecccccc--ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc---------------cccceeecc-c
Confidence 9873211 23456677889999999999998887765 45799999999987 333444443 4
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+.++.|+|++..++++ +|+.|+.|+|||+. +++++.++.+|.+.|++++|+|
T Consensus 321 ~~v~~~~~~~~~~~lv~~------sg~~d~~I~iwd~~------~~~~v~~l~gH~~~V~~l~~sp 374 (420)
T 4gga_A 321 SQVCSILWSPHYKELISG------HGFAQNQLVIWKYP------TMAKVAELKGHTSRVLSLTMSP 374 (420)
T ss_dssp SCEEEEEEETTTTEEEEE------ECTTTCCEEEEETT------TCCEEEEECCCSSCEEEEEECT
T ss_pred cceeeeeecCCCCeEEEE------EecCCCEEEEEECC------CCcEEEEEcCCCCCEEEEEEcC
Confidence 578899999999987754 23356999999998 7888999999999999999998
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.1e-32 Score=222.32 Aligned_cols=260 Identities=10% Similarity=0.108 Sum_probs=175.9
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC--CccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD--PATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.+++|.+ .|++++|+|||++|++|+.|+ ++|||++......... .............. ...+..++.+++|+..+
T Consensus 14 ~~~~h~~-~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSN-PVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYV-AFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CC-CCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEE-EEECSSTTEEEEEETTT
T ss_pred ccccCCC-ceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEE-EEEECCccEEEEEECCC
Confidence 4578988 899999999999999998775 7899988663332211 11111111111111 12233456899999988
Q ss_pred cCcccccccccCCeEEEEEecCC----------------C------------------cEEEE--EcCCCeEEEEEcCCC
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSS----------------A------------------QEFCS--VGDDSCLILWDARVG 124 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~----------------~------------------~~l~s--~~~dg~i~iwd~~~~ 124 (309)
.+.+..+. +...|.++.|+++. . .+++. |+.||.|++||+.++
T Consensus 91 ~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 91 KQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp TEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-
T ss_pred CcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCC
Confidence 88877765 56678888887642 0 12333 578889999998764
Q ss_pred Cc--------------ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc-EEEEecCCCCCCCCCCceeeec-c-CCCC
Q 021657 125 TS--------------PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS-VRMFDRRNLTSNGVGSPINKFE-G-HSAA 187 (309)
Q Consensus 125 ~~--------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~-~-~~~~ 187 (309)
+. +....+.+|...|++++|+| ++.+|++|+.|++ |++||+++ ++.+..+. + |...
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~------~~~~~~~~~g~h~~~ 242 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTED------GVLVREFRRGLDRAD 242 (355)
T ss_dssp -----------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTT------CCEEEEEECTTCCSC
T ss_pred CccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCC------CcEEEEEEcCCCCCc
Confidence 30 11566789999999999999 9999999999998 99999999 88999998 5 8999
Q ss_pred eeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC--------CcCCCCceeeeecCCCcceeeEEEccCCCeEE
Q 021657 188 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR--------TTNYPAGLFFQHAGHRDKVVDFHWNASDPWTV 259 (309)
Q Consensus 188 v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 259 (309)
|++++|+|++++ |++++.|+.|++||++........... ...+..........+......++|++++..++
T Consensus 243 v~~~~~s~~~~~-l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~ 321 (355)
T 3vu4_A 243 VVDMKWSTDGSK-LAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVV 321 (355)
T ss_dssp EEEEEECTTSCE-EEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEE
T ss_pred EEEEEECCCCCE-EEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEE
Confidence 999999999996 679999999999999864221110000 00000001111112223457799999887766
Q ss_pred EEecCCCCCCCCCCeEEEEEccc
Q 021657 260 VSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 260 ~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+++.||.+++|++..
T Consensus 322 --------~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 322 --------VWPHTRMIETFKVVF 336 (355)
T ss_dssp --------EETTTTEEEEEEEEE
T ss_pred --------EEeCCCeEEEEEEEc
Confidence 455569999999983
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=234.61 Aligned_cols=255 Identities=9% Similarity=0.095 Sum_probs=180.6
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCC---ccccccccC--CccccccC--------------CCCceeecCC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ---DHITSSATD--PATAKSAG--------------SSGSIIKQSP 66 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~---~~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~ 66 (309)
+|.+ .|++++|+|++++|++|+.||.|++||++ .+....... ........ .......+..
T Consensus 109 ~h~~-~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 109 DCSS-TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp ECSS-CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred cCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 5777 89999999999999999999999999995 221111000 00000000 0011223344
Q ss_pred CCCCCCcccCCCCCcCccccccc--ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEE
Q 021657 67 KPGDGNDKAADGPSVGPRGIYNG--HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVD 143 (309)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~ 143 (309)
+..++.+.+|+..+.+.+..+.. |...|++++|+|++ .+|++|+.||.|++||+++++ ....+. .|...|.+++
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~ 264 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNV--LIRSWSFGDHAPITHVE 264 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTE--EEEEEBCTTCEEEEEEE
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCcc--EEEEEecCCCCceEEEE
Confidence 55678999999999999999988 89999999999998 889999999999999999866 555554 7788999996
Q ss_pred eccC---CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc--------------------------CCCCeeEEEEe
Q 021657 144 WNPL---DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG--------------------------HSAAVLCVQWS 194 (309)
Q Consensus 144 ~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--------------------------~~~~v~~~~~~ 194 (309)
|+|. ++.+|++|+.||.|++||+++ ++.+..+.+ |...|++++|+
T Consensus 265 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 265 VCQFYGKNSVIVVGGSSKTFLTIWNFVK------GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp ECTTTCTTEEEEEEESTTEEEEEEETTT------TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred eccccCCCccEEEEEcCCCcEEEEEcCC------CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 6651 577999999999999999998 665555543 45568889999
Q ss_pred cCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc----------------------CCCCceeeeecCCCcceeeEEEc
Q 021657 195 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT----------------------NYPAGLFFQHAGHRDKVVDFHWN 252 (309)
Q Consensus 195 ~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~v~~~~~~ 252 (309)
+++ ++++|+.|+.|++||++............. ............|...|++++|+
T Consensus 339 -~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~ 416 (437)
T 3gre_A 339 -NDK-ILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTC 416 (437)
T ss_dssp -TTE-EEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEE
T ss_pred -Cce-EEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeee
Confidence 666 467999999999999987433221111000 00001112233489999999999
Q ss_pred cC-CCeEEEEecCCCCCCCCCCeEEEEE
Q 021657 253 AS-DPWTVVSVSDDCDSTGGGGTLQIWR 279 (309)
Q Consensus 253 ~~-~~~~~~s~s~d~~s~~~dg~v~vw~ 279 (309)
++ +..++++++.| |.|+||+
T Consensus 417 ~~~~~~~l~s~~~d-------G~I~iw~ 437 (437)
T 3gre_A 417 EVDETPLLVACDNS-------GLIGIFQ 437 (437)
T ss_dssp ESSSSEEEEEEETT-------SCEEEEC
T ss_pred ccCCceEEEEEcCC-------ceEEEeC
Confidence 97 35567766655 9999995
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=224.87 Aligned_cols=245 Identities=16% Similarity=0.156 Sum_probs=182.9
Q ss_pred CCCCCcceEEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCcc---cc-ccCCCCceeecCCCCCCCCcccCCCC
Q 021657 5 TGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPAT---AK-SAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
.+|.. .|++++|+| ++.+|++++.||.|++||+.++.......... .. ..........+..+..++.+.+|+..
T Consensus 96 ~~~~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRY-SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSS-CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCC-cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 46888 899999999 78899999999999999998874333222111 11 11111111233444567899999999
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe---------------eccCCceeEEEe
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE---------------KAHDADLHCVDW 144 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------~~~~~~v~~~~~ 144 (309)
+.+.+..+.+|...|.+++|+|++..+|++++.||.|++||++..... ...+ ..|...|.+++|
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC-LITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC-SEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc-cccccccccccceeeccccccccCceeEEEE
Confidence 999999999999999999999998557999999999999999876532 2222 578899999999
Q ss_pred ccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC-----CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccc
Q 021657 145 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH-----SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG 219 (309)
Q Consensus 145 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~ 219 (309)
+| ++++|++++.||.|++||+++ ++....+..+ ...+........+.. ++.++.|+.|++||+..
T Consensus 254 ~~-~~~~l~~~~~dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~d~~~-- 323 (408)
T 4a11_B 254 TS-DGLHLLTVGTDNRMRLWNSSN------GENTLVNYGKVCNNSKKGLKFTVSCGCSSE-FVFVPYGSTIAVYTVYS-- 323 (408)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTT------CCBCCCCCCCCCCCCSSCCCCEECCSSSSC-EEEEEETTEEEEEETTT--
T ss_pred cC-CCCEEEEecCCCeEEEEECCC------CccceeccccccccccccceeEEecCCCce-EEEEecCCEEEEEECcC--
Confidence 99 999999999999999999998 4444333221 111222222223333 45677799999999987
Q ss_pred ccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 220 KKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...+..+.+|...|.+++|+|++.+++ +|+.||.|++||+..
T Consensus 324 -------------~~~~~~~~~~~~~v~~~~~s~~~~~l~--------s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 324 -------------GEQITMLKGHYKTVDCCVFQSNFQELY--------SGSRDCNILAWVPSL 365 (408)
T ss_dssp -------------CCEEEEECCCSSCEEEEEEETTTTEEE--------EEETTSCEEEEEECC
T ss_pred -------------CcceeeeccCCCeEEEEEEcCCCCEEE--------EECCCCeEEEEeCCC
Confidence 456677889999999999999887655 444559999999994
No 109
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.4e-32 Score=224.23 Aligned_cols=227 Identities=18% Similarity=0.291 Sum_probs=177.2
Q ss_pred EEEEECCCCCEE-EEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 13 FALAMCPTEPYV-LSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 13 ~~~~~~~~~~~l-~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
..++++|+...+ ++++.||.|+||++...... ......+.+|.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~------------------------------------~~~~~~~~~h~ 81 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRV------------------------------------DKNVPLVCGHT 81 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC------------------------------------CTTCCCBCCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCC------------------------------------CCCCceEecCC
Confidence 467888876544 46899999999998642110 12234567899
Q ss_pred CCeEEEEEec-CCCcEEEEEcCCCeEEEEEcCCCCc-----ceEEEeeccCCceeEEEeccCCC-CeEEEEcCCCcEEEE
Q 021657 92 DTVEDVTFCP-SSAQEFCSVGDDSCLILWDARVGTS-----PVIKVEKAHDADLHCVDWNPLDD-NLILTGSADNSVRMF 164 (309)
Q Consensus 92 ~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~i~ 164 (309)
+.|++++|+| ++ .+|++|+.||.|++||+.++.. .....+.+|...|.+++|+| ++ ++|++++.||.|++|
T Consensus 82 ~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 82 APVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHP-TAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp SCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECS-SBTTEEEEEETTSCEEEE
T ss_pred CCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECc-CCCCEEEEEcCCCEEEEE
Confidence 9999999999 65 8999999999999999988732 24667789999999999999 66 799999999999999
Q ss_pred ecCCCCCCCCCCceeee--ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee-cC
Q 021657 165 DRRNLTSNGVGSPINKF--EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH-AG 241 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (309)
|+++ ++.+..+ ..|...|.+++|+|++.. |++++.|+.|++||++. ...+..+ .+
T Consensus 160 d~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~---------------~~~~~~~~~~ 217 (402)
T 2aq5_A 160 DVGT------GAAVLTLGPDVHPDTIYSVDWSRDGAL-ICTSCRDKRVRVIEPRK---------------GTVVAEKDRP 217 (402)
T ss_dssp ETTT------TEEEEEECTTTCCSCEEEEEECTTSSC-EEEEETTSEEEEEETTT---------------TEEEEEEECS
T ss_pred ECCC------CCccEEEecCCCCCceEEEEECCCCCE-EEEEecCCcEEEEeCCC---------------CceeeeeccC
Confidence 9998 8888888 789999999999999996 56999999999999987 3344555 57
Q ss_pred CCcc-eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh-cccceEEEeeeCC
Q 021657 242 HRDK-VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE-KFKAHVISCTSKP 309 (309)
Q Consensus 242 ~~~~-v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~P 309 (309)
|... +..+.|+|++. +++++. +.+.|+.|++||+.... .++.... .|...|.+++|+|
T Consensus 218 ~~~~~~~~~~~~~~~~-~l~~g~----~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 218 HEGTRPVHAVFVSEGK-ILTTGF----SRMSERQVALWDTKHLE-----EPLSLQELDTSSGVLLPFFDP 277 (402)
T ss_dssp SCSSSCCEEEECSTTE-EEEEEE----CTTCCEEEEEEETTBCS-----SCSEEEECCCCSSCEEEEEET
T ss_pred CCCCcceEEEEcCCCc-EEEEec----cCCCCceEEEEcCcccc-----CCceEEeccCCCceeEEEEcC
Confidence 7765 89999999766 455441 11455999999998421 1122222 4667788888876
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-32 Score=222.24 Aligned_cols=221 Identities=9% Similarity=0.082 Sum_probs=166.7
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
+|.+ .|.+++|||+|++||+++.||.|+|||.+. .+.
T Consensus 83 ~~~~-~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------------------------------------------~l~ 119 (588)
T 2j04_A 83 QPVC-YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------------------------------------------MLT 119 (588)
T ss_dssp SCSC-CEEEEEECSSSSCEEEEETTSCEEEEETTE------------------------------------------EEE
T ss_pred CCCC-cEEEEEECCCCCEEEEEeCCCcEEEEeCCc------------------------------------------eee
Confidence 5655 899999999999999999999999999653 122
Q ss_pred ccccccC-----CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc--c---eEEEe----eccCCceeEEEeccCCCCe
Q 021657 86 IYNGHED-----TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P---VIKVE----KAHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 86 ~~~~~~~-----~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~---~~~~~----~~~~~~v~~~~~~~~~~~~ 151 (309)
.+. |.. .|.+++|+|+| ++|++|+.||+|+|||+.++.. + ....+ .+|...|.+++|+| ++
T Consensus 120 ~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg-- 194 (588)
T 2j04_A 120 NLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV-- 194 (588)
T ss_dssp ECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--
T ss_pred ecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--
Confidence 333 443 59999999999 8999999999999999987652 1 23444 56778999999999 77
Q ss_pred EEEEcCCCcEEEEecCCCCCCCCCC---ceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 152 ILTGSADNSVRMFDRRNLTSNGVGS---PINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 152 l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
+++++.|+.|++||+.. .. ..+++ .+|...|.+++|+ +. .+|+++ ++.|++||+..
T Consensus 195 Laass~D~tVrlWd~~~------~~~~~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~---------- 254 (588)
T 2j04_A 195 LVAALSNNSVFSMTVSA------SSHQPVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKN---------- 254 (588)
T ss_dssp EEEEETTCCEEEECCCS------SSSCCCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTT----------
T ss_pred EEEEeCCCeEEEEECCC------CccccceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCC----------
Confidence 88888999999999987 44 23456 4678899999999 55 466777 69999999987
Q ss_pred CcCCCCceeeeecCCCcceeeEEE--ccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChh----------------
Q 021657 228 TTNYPAGLFFQHAGHRDKVVDFHW--NASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQD---------------- 289 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~---------------- 289 (309)
........+|...|.+++| +|++.. ++ +++.||+ ++|..+.....+.+
T Consensus 255 -----~~~~~~~~gh~~~V~~va~~~s~d~~~-La-------~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~ 320 (588)
T 2j04_A 255 -----YSISSLKTGSLENFHIIPLNHEKESTI-LL-------MSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTI 320 (588)
T ss_dssp -----TEEEEEECSCCSCCCEEEETTCSSCEE-EE-------ECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTT
T ss_pred -----CeEEEEEcCCCceEEEEEeeeCCCCCE-EE-------EEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECC
Confidence 2221223379999999999 998765 44 4445599 99997543322222
Q ss_pred -hHhHhhhcccceEEEeeeCC
Q 021657 290 -EVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 290 -~~~~~~~~h~~~v~~~~~~P 309 (309)
..+..+++ ...|.+++|+|
T Consensus 321 g~~l~~~~~-~~~I~~va~SP 340 (588)
T 2j04_A 321 WNEFNNYET-TLVIHGISLSP 340 (588)
T ss_dssp TTSSSSSCC-EEEEEEEEECT
T ss_pred CCceeeecc-ceEEEEEEECC
Confidence 11222333 55799999998
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=212.47 Aligned_cols=259 Identities=19% Similarity=0.260 Sum_probs=200.5
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----C--ccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----P--ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
.++|+||+++ +||+| .|++|+|||++++....... . .......... ..+..+..++.+++|+..+.+.+.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~--~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG--NYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS--SEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC--CEEEEEECCCcEEEeecCCceeEE
Confidence 4679999886 67665 59999999999875432221 1 1111222222 233445678899999999999999
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
.+.+|...+.++.+. + .++++++.++.+++|+...... ....+.+|...+..+.+.+ +++++++++.|+.|++||
T Consensus 104 ~~~~h~~~~~~~~~~--~-~~l~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 104 NMTSHSARVGSLSWN--S-YILSSGSRSGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEECCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EecCccceEEEeecC--C-CEEEEEecCCceEeeecCCCce-eEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEE
Confidence 999999998876654 3 6799999999999999877653 5667789999999999999 999999999999999999
Q ss_pred cCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEE--EEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF--GSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
+++.+.. .........+...|.+++++|++..++ ++++.++.|++||.+... ......+.
T Consensus 179 ~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~----------------~~~~~~~~ 240 (318)
T 4ggc_A 179 SAPGEGG--WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----------------CLSAVDAH 240 (318)
T ss_dssp SSCBTTB--SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC----------------EEEEEECS
T ss_pred CCCCccc--ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc----------------ccccccce
Confidence 9873211 223445566788999999999888765 466788999999988721 22334567
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
..+..+.|+|++..++++ +|+.|+.|++||+. +++++.++++|.+.|++++|+|
T Consensus 241 ~~v~~~~~~~~~~~~~~~------sg~~d~~i~iwd~~------~~~~~~~l~gH~~~V~~l~~sp 294 (318)
T 4ggc_A 241 SQVCSILWSPHYKELISG------HGFAQNQLVIWKYP------TMAKVAELKGHTSRVLSLTMSP 294 (318)
T ss_dssp SCEEEEEEETTTTEEEEE------ECTTTCCEEEEETT------TCCEEEEECCCSSCEEEEEECT
T ss_pred eeeeeeeecccccceEEE------EEcCCCEEEEEECC------CCcEEEEEcCCCCCEEEEEEcC
Confidence 789999999999887754 33456999999999 7888999999999999999997
No 112
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=241.21 Aligned_cols=220 Identities=20% Similarity=0.336 Sum_probs=179.6
Q ss_pred cccCCCCCcceEEEEECCC--CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 2 EILTGHQDNAEFALAMCPT--EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~--~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
+.+.+|.+ +|++++|+|+ +++|++|+.||.|++||+.++.
T Consensus 47 ~~l~~h~~-~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~------------------------------------- 88 (753)
T 3jro_A 47 DTLTGHEG-PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR------------------------------------- 88 (753)
T ss_dssp EEECCCSS-CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE-------------------------------------
T ss_pred eeccCCcC-ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc-------------------------------------
Confidence 46789998 8999999988 9999999999999999987431
Q ss_pred CcCcccccccccCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC----------
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL---------- 147 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---------- 147 (309)
......+.+|...|++++|+|+ + .++++|+.||.|++||++.+..........|...|.+++|+|.
T Consensus 89 -~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 89 -WSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp -EEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred -ccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence 1134556779999999999998 6 8899999999999999988754456667889999999999993
Q ss_pred --CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecC---CCcEEEEecCCCcEEEEeCCcccccc
Q 021657 148 --DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD---KSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 148 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
++.++++|+.||.|++||+++.... ......+.+|...|++++|+|+ +. ++++++.||.|++||++......
T Consensus 167 ~~d~~~l~sgs~dg~I~iwd~~~~~~~--~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~ 243 (753)
T 3jro_A 167 TKESRKFVTGGADNLVKIWKYNSDAQT--YVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPW 243 (753)
T ss_dssp CGGGCCEEEEETTSCEEEEEEETTTTE--EEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCC
T ss_pred CCCCCEEEEEECCCeEEEEeccCCccc--ceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcc
Confidence 3889999999999999999873110 1556778889999999999999 66 57799999999999998732211
Q ss_pred cCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 223 EQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.........|...|++++|+|++.+++ +|+.||.|++|++..
T Consensus 244 ----------~~~~~~~~~~~~~v~~l~~spdg~~l~--------s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 244 ----------KKTLLKEEKFPDVLWRASWSLSGNVLA--------LSGGDNKVTLWKENL 285 (753)
T ss_dssp ----------BCCBSSSSCCSSCCCCEEECTTTCCEE--------EECSSSCEECCBCCS
T ss_pred ----------eeEEeccCCCCCceEEEEEcCCCCEEE--------EEcCCCEEEEEecCC
Confidence 112334466888999999999888765 555569999999984
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-32 Score=224.60 Aligned_cols=209 Identities=14% Similarity=0.162 Sum_probs=150.3
Q ss_pred cccCCCCCcceEEEEECC--------CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCP--------TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~--------~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
..|+||.+ .|++++|+| |+++||||+.|++|+|||+.+.
T Consensus 130 ~~~~gH~~-~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~-------------------------------- 176 (393)
T 4gq1_A 130 GGKSGHHN-FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE-------------------------------- 176 (393)
T ss_dssp CTTTSCSS-CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--------------------------------
T ss_pred cccCCCCC-ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--------------------------------
Confidence 45889999 899999998 7899999999999999998632
Q ss_pred ccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce-----------------------EE
Q 021657 74 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-----------------------IK 130 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----------------------~~ 130 (309)
.++..+.+|...|.+++|+|++..+|++++.||+|++||+++++... ..
T Consensus 177 --------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 177 --------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp --------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred --------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 23445667889999999999986789999999999999998765211 01
Q ss_pred EeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEE------------------E
Q 021657 131 VEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV------------------Q 192 (309)
Q Consensus 131 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~------------------~ 192 (309)
...+|...+.++.|++.++..+++++.|+++++||+.. ++....+..+...+..+ .
T Consensus 249 ~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
T 4gq1_A 249 HSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA------NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGAC 322 (393)
T ss_dssp ---CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------------CCSCSEEEECSSCCSSCCE
T ss_pred ecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc------CCCCceEeeecCccccEEEccccccccccCcceeEE
Confidence 12467788999999743899999999999999999987 44444443333332222 2
Q ss_pred Ee-cCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCC
Q 021657 193 WS-PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGG 271 (309)
Q Consensus 193 ~~-~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~ 271 (309)
++ +.+..++++|+.||.|++||+.. ........+|..+|.+++|+|++.+| |++++|
T Consensus 323 ~~~~~~~~~~~sgs~Dg~V~lwd~~~---------------~~~~~~~~~~~~~V~svafspdG~~L-A~as~~------ 380 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGLIQLINTYE---------------KDSNSIPIQLGMPIVDFCWHQDGSHL-AIATEG------ 380 (393)
T ss_dssp ECSSCTTEEEEEETTTTEEEEEETTC---------------TTCCEEEEECSSCEEEEEECTTSSEE-EEEESS------
T ss_pred EccCCCCEEEEEECCCCEEEEEECCC---------------CcEEEEecCCCCcEEEEEEcCCCCEE-EEEeCC------
Confidence 33 33444677899999999999987 33345566788899999999998864 555554
Q ss_pred CCeEEEEEcc
Q 021657 272 GGTLQIWRMS 281 (309)
Q Consensus 272 dg~v~vw~~~ 281 (309)
.+.+|++.
T Consensus 381 --Gv~lvrL~ 388 (393)
T 4gq1_A 381 --SVLLTRLM 388 (393)
T ss_dssp --EEEEEEEG
T ss_pred --CeEEEEEe
Confidence 68888876
No 114
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8.9e-32 Score=208.63 Aligned_cols=215 Identities=13% Similarity=0.132 Sum_probs=156.9
Q ss_pred ceEEEEECCC----CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC-CCcCccc
Q 021657 11 AEFALAMCPT----EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG-PSVGPRG 85 (309)
Q Consensus 11 ~V~~~~~~~~----~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 85 (309)
.|++++|+|+ ++++++++.+ +++|++.++... .......+..+++|+. ..++.+.
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv------------------~ss~~g~d~~V~~~~~s~dG~~~~ 172 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLV------------------SSSGTLSDQQVEVMTFAEDGGGKE 172 (356)
T ss_dssp EEEEECC------CCEEEEEEEEE--EEEEEETTTEEE------------------EEESSSTTCEEEEEEECTTSCEEE
T ss_pred ceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEE------------------EecccCCCCcEEEEEECCCCceee
Confidence 6888999999 8889988754 778887543221 1111234667777777 3466777
Q ss_pred ccccccCCeEEEEEec---CCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC---CceeEEEeccCCCCeE-------
Q 021657 86 IYNGHEDTVEDVTFCP---SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD---ADLHCVDWNPLDDNLI------- 152 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l------- 152 (309)
.+..|...++.++|++ ++ .+|++++.|++|+|||+.+++ ....+.+|. ..+.+++|+| ++.++
T Consensus 173 s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk--~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~ 248 (356)
T 2w18_A 173 NQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQ--LLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPC 248 (356)
T ss_dssp EEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCC--EEEEEECCC---CCCEEEEEEE-TTEEEEEEC---
T ss_pred eeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCc--EEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCC
Confidence 7889999999999998 55 889999999999999999998 677776654 3677789999 88876
Q ss_pred -----EEEcCCCcEEEEecCCCCCCCCCCceeee-----ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccc
Q 021657 153 -----LTGSADNSVRMFDRRNLTSNGVGSPINKF-----EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 153 -----~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
++|+.|++|++||..+ ++.+..+ .+|...+.+..++ +. ++|+++.|++|+|||+.+
T Consensus 249 ~~w~laSGs~D~tIklWd~~t------gk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~t----- 314 (356)
T 2w18_A 249 AKESESLRSPVFQLIVINPKT------TLSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLLL----- 314 (356)
T ss_dssp ---------CCEEEEEEETTT------TEEEEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETTT-----
T ss_pred CcceeeccCCCcEEEEEECCC------CEEEEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECCC-----
Confidence 5688899999999998 7766554 3555554444443 55 578999999999999998
Q ss_pred cCCCCCcCCCCceeeeecCCCccee-eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 223 EQGPRTTNYPAGLFFQHAGHRDKVV-DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+++..+.+|...+. .++|+|++.+|+ ||+.|++|+|||+.
T Consensus 315 ----------Gk~l~tL~gH~~~vvs~vafSPDG~~La--------SGS~D~TIklWd~~ 356 (356)
T 2w18_A 315 ----------GQCTALLPPVSDQHWSFVKWSGTDSHLL--------AGQKDGNIFVYHYS 356 (356)
T ss_dssp ----------CSEEEEECCC--CCCCEEEECSSSSEEE--------EECTTSCEEEEEEC
T ss_pred ----------CcEEEEecCCCCCeEEEEEECCCCCEEE--------EEECCCcEEEecCC
Confidence 556778888887665 589999988755 55556999999963
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=222.57 Aligned_cols=240 Identities=13% Similarity=0.139 Sum_probs=159.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccc---cccccCCccc----cccC-CCCceeecCCCCCC---------CCc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSATDPATA----KSAG-SSGSIIKQSPKPGD---------GND 73 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~---~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~---------~~~ 73 (309)
++++++|+|+|++|+++ .++.|++||+.++. .......... .... .............. ...
T Consensus 6 p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred cEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 68899999999966655 57899999998775 2221111000 0000 00000000000000 000
Q ss_pred ccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcC--CCCcceEEEee--ccCCceeEEEeccCCC
Q 021657 74 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR--VGTSPVIKVEK--AHDADLHCVDWNPLDD 149 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 149 (309)
.........+.....+|...|++++|+|++..++++++.||.|++||+. +++ ....+. .|...|.+++|+| ++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp-~~ 161 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAE-DD 161 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECT-TS
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcC-CC
Confidence 0000000111223346778999999999994435999999999999998 665 444444 6778999999999 99
Q ss_pred CeEEEEcCCCcEEEEecCCCCCCCCCC-ceeeeccCCCCeeEEEEecC---CCcEEEEecCCCcEEEEeCCcccccccCC
Q 021657 150 NLILTGSADNSVRMFDRRNLTSNGVGS-PINKFEGHSAAVLCVQWSPD---KSSVFGSSAEDGLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~dg~i~iwd~~~~~~~~~~~ 225 (309)
.+|++++.+|.|++|++.+... .. .+..+.+|...|++++|+|+ +++ |++++.|+.|++||++.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~sp~~~~~~~-l~s~~~d~~i~vwd~~~-------- 229 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPE---EKFTQEPILGHVSMLTDVHLIKDSDGHQF-IITSDRDEHIKISHYPQ-------- 229 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCC---SSCCCCCSEECSSCEEEEEEEECTTSCEE-EEEEETTSCEEEEEESC--------
T ss_pred CEEEEEeCCCcEEEEecCCccc---ccccceeeecccCceEEEEEcCCCCCCcE-EEEEcCCCcEEEEECCC--------
Confidence 9999999999999999987321 11 33477889999999999999 775 67999999999999986
Q ss_pred CCCcCCCCceeee-ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 226 PRTTNYPAGLFFQ-HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 226 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
...+.. +.+|...|.+++|+ ++.+++ +++ .|+.|++||+..
T Consensus 230 -------~~~~~~~~~~h~~~v~~~~~s-d~~~l~-s~~-------~d~~v~vwd~~~ 271 (450)
T 2vdu_B 230 -------CFIVDKWLFGHKHFVSSICCG-KDYLLL-SAG-------GDDKIFAWDWKT 271 (450)
T ss_dssp -------TTCEEEECCCCSSCEEEEEEC-STTEEE-EEE-------SSSEEEEEETTT
T ss_pred -------CceeeeeecCCCCceEEEEEC-CCCEEE-EEe-------CCCeEEEEECCC
Confidence 223333 56899999999999 777655 444 459999999983
No 116
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.6e-32 Score=239.70 Aligned_cols=246 Identities=17% Similarity=0.225 Sum_probs=195.2
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+.+.+|.+ +|++++|+|++++|++|+.||.|+|||+.++....... ............ .+..+..++.+.+|+
T Consensus 49 ~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 49 RSIQVTET-PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP--YVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEECCSS-CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS--EEEEEETTSEEEEEE
T ss_pred EEEecCCC-cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC--EEEEEcCCCEEEEEE
Confidence 46778998 89999999999999999999999999998874433222 111112222222 222445678899999
Q ss_pred CCCc-CcccccccccCCeEEEEEec-CCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC-CCCeEEE
Q 021657 78 GPSV-GPRGIYNGHEDTVEDVTFCP-SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDNLILT 154 (309)
Q Consensus 78 ~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~ 154 (309)
..+. .....+.+|...|.+++|+| ++ ..|++++.||.|++||+.++.. .......+...+.+++|+|. ++.++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 203 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTP-NFTLTTGQERGVNYVDYYPLPDKPYMIT 203 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEE-EEEEEEETTSEEEEEETTCSSC-SEEEECCCTTCCCEEEECCSTTCCEEEE
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcc-eeEEecCCCCCEEEEEEEECCCCCEEEE
Confidence 8876 56677889999999999999 55 8999999999999999987763 22333344588999999873 5679999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
++.||.|++||+++ ++.+..+..|...|.+++|+|+++. +++++.||.|++||+.. ..
T Consensus 204 ~~~dg~i~~~d~~~------~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~v~vwd~~~---------------~~ 261 (814)
T 3mkq_A 204 ASDDLTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSST---------------YK 261 (814)
T ss_dssp ECTTSEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTT---------------CS
T ss_pred EeCCCEEEEEECCC------CcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCeEEEEECCC---------------Cc
Confidence 99999999999998 8889999999999999999999995 67999999999999987 34
Q ss_pred eeeeecCCCcceeeEEEccCCCeE-EEEecCCCCCCCCCCeEEEEEccc
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWT-VVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~-~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
....+..|...+.+++|+|++..+ +++++ | +.+.+|++..
T Consensus 262 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~ 302 (814)
T 3mkq_A 262 VEKTLNVGLERSWCIATHPTGRKNYIASGF-D-------NGFTVLSLGN 302 (814)
T ss_dssp EEEEECCSSSSEEEEEECTTCGGGEEEEEE-T-------TEEEEEECSC
T ss_pred EEEEeecCCCcEEEEEEccCCCceEEEEEe-C-------CCEEEEEcCC
Confidence 566778888999999999998765 44333 3 6788888763
No 117
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.7e-31 Score=219.44 Aligned_cols=259 Identities=14% Similarity=0.197 Sum_probs=179.5
Q ss_pred cccCCCC------------CcceEEEEECCCC--CEEEEecCCCcEEEEeCCccccc-----------------------
Q 021657 2 EILTGHQ------------DNAEFALAMCPTE--PYVLSGGKDKSVVLWSIQDHITS----------------------- 44 (309)
Q Consensus 2 ~~l~~H~------------~~~V~~~~~~~~~--~~l~t~~~dg~i~vwd~~~~~~~----------------------- 44 (309)
..+++|. + .|++++|+|++ .+|++++.||+|++||+.+....
T Consensus 75 ~~~~~h~~~~~~~~~~~~~~-~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 75 STFQSHEPEFDYLKSLEIEE-KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEECCCCEEEGGGTEEECC-CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred cccccccccccccccccccC-ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 3577887 6 79999999998 79999999999999999764221
Q ss_pred ---------------------cccCCccccccCCCCceeecCCCCCCCCcccCCCCC-cCccc-------ccccccCCeE
Q 021657 45 ---------------------SATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS-VGPRG-------IYNGHEDTVE 95 (309)
Q Consensus 45 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~v~ 95 (309)
.................... + .++.+.+|+... .+... .+.+|...|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 230 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLS--A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT 230 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEE--E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEE--e-CCCeEEEEECCCCCceeeeeecccccccccCcceE
Confidence 01111111112222222222 3 588999999984 33333 4678999999
Q ss_pred EEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc--eEEEeeccCC------------ceeEEEeccCCCCeEEEEcCCCcE
Q 021657 96 DVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDA------------DLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 96 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
+++|+|++..+|++|+.||.|++||+++++.. ....+..|.. .|.+++|+| ++++|++++. +.|
T Consensus 231 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v 308 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSV 308 (447)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEE
T ss_pred EEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeE
Confidence 99999997678999999999999999887721 1466667765 899999999 9999999998 999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCC---------------eeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAA---------------VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~ 226 (309)
++||+++. ++++..+..|... +..++|+|++++ |++|+.||.|++||+...........
T Consensus 309 ~iwd~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~-l~s~s~dg~v~iwd~~~~~~~~~~~~ 382 (447)
T 3dw8_B 309 KVWDLNME-----NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRMFDRNTKRDITLEAS 382 (447)
T ss_dssp EEEETTCC-----SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE-EEEECSTTEEEEEETTTCCEEEEECC
T ss_pred EEEeCCCC-----ccccceeeccccccccccccccccccccceEEEECCCCCE-EEEeccCCEEEEEEcCCCcceeeeec
Confidence 99999863 5567777766432 234999999996 57999999999999987332211000
Q ss_pred CCcC-----------------CCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 227 RTTN-----------------YPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 227 ~~~~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.... ...........+...|..++|+|++..++ +++.+ .+++|.-+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la-~~~~~--------~~~~~~~~ 445 (447)
T 3dw8_B 383 RENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIA-VATTN--------NLYIFQDK 445 (447)
T ss_dssp STTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEE-EECSS--------CEEEEECC
T ss_pred ccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEE-EEecc--------eeeeeccc
Confidence 0000 00001111223456899999999988654 44433 58888754
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=8.2e-31 Score=210.39 Aligned_cols=236 Identities=13% Similarity=0.064 Sum_probs=179.4
Q ss_pred ccCCCCCcceEEEEECCCCC-EEEEecCCCcEEEEeC-CccccccccC---C--ccccccCCCCceeecCCCCCCCCccc
Q 021657 3 ILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSI-QDHITSSATD---P--ATAKSAGSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~-~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (309)
.+.+|.. .|++++|+|+++ +|++|+.||.|++||+ .++....... . ........ ...+..+..++.+.+
T Consensus 51 ~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~i 126 (342)
T 1yfq_A 51 QSLRYKH-PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG---DDKLIAASWDGLIEV 126 (342)
T ss_dssp EEEECSS-CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEE
T ss_pred eeeecCC-ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEE
Confidence 4557888 899999999999 9999999999999999 7663311111 1 11111111 112233456788999
Q ss_pred CCCCC---------cCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-CCcceEEEeeccCCceeEEEec
Q 021657 76 ADGPS---------VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 76 ~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~ 145 (309)
|+..+ .+++..+. |...|.+++|+|++ +++++.|+.|++||+++ ...........|...+.+++|+
T Consensus 127 wd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~ 202 (342)
T 1yfq_A 127 IDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202 (342)
T ss_dssp ECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC
T ss_pred EcccccccccccccCCeeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC
Confidence 99887 77777776 88999999999865 89999999999999988 5544455666788999999999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCC---------CeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA---------AVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
|.+++++++++.||.|++||++........+.+..+..|.. .|.+++|+|++++ |++++.||.|++||++
T Consensus 203 ~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 203 PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYTAGSDGIISCWNLQ 281 (342)
T ss_dssp SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC-EEEEETTSCEEEEETT
T ss_pred CCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCE-EEEecCCceEEEEcCc
Confidence 84478999999999999999987210000166777777755 9999999999996 5699999999999998
Q ss_pred cccccccCCCCCcCCCCceeeeecCC-CcceeeEEEccCCCeEEEEecCC
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAGH-RDKVVDFHWNASDPWTVVSVSDD 265 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~s~s~d 265 (309)
. ...+..+.+| ..+|.+++ |++.+ +++++.|
T Consensus 282 ~---------------~~~~~~~~~~h~~~v~~~~--~~~~~-l~s~s~D 313 (342)
T 1yfq_A 282 T---------------RKKIKNFAKFNEDSVVKIA--CSDNI-LCLATSD 313 (342)
T ss_dssp T---------------TEEEEECCCCSSSEEEEEE--ECSSE-EEEEEEC
T ss_pred c---------------HhHhhhhhcccCCCceEec--CCCCe-EEEEecC
Confidence 7 4456677888 99999999 87775 5544444
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=210.14 Aligned_cols=195 Identities=15% Similarity=0.248 Sum_probs=154.0
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+.+|.+ .|++++|+|++++|++++.||.|++||+++..
T Consensus 80 ~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--------------------------------------- 119 (368)
T 3mmy_A 80 KAQQMHTG-PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ--------------------------------------- 119 (368)
T ss_dssp EEEEECSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------------------------------------
T ss_pred EEeccccC-CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC---------------------------------------
Confidence 45778998 89999999999999999999999999997531
Q ss_pred CcccccccccCCeEEEEE--ecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc------------------------
Q 021657 82 GPRGIYNGHEDTVEDVTF--CPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH------------------------ 135 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------------------------ 135 (309)
...+..|...|.+++| +|++ .+|++++.||.|++||+++++. ...+..+
T Consensus 120 --~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 194 (368)
T 3mmy_A 120 --AIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNP--MMVLQLPERCYCADVIYPMAVVATAERGLIV 194 (368)
T ss_dssp --EEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSC--SEEEECSSCEEEEEEETTEEEEEEGGGCEEE
T ss_pred --ceeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcE--EEEEecCCCceEEEecCCeeEEEeCCCcEEE
Confidence 1224568999999999 7887 8899999999999999987762 2222222
Q ss_pred -----------------CCceeEEEeccCCCCe----EEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCC--------
Q 021657 136 -----------------DADLHCVDWNPLDDNL----ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA-------- 186 (309)
Q Consensus 136 -----------------~~~v~~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-------- 186 (309)
...+.++++.+ +... +++++.||.|++||++.... ...+..+..|..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 195 YQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNP---AKDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp EECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCH---HHHSEEEECSEEC----CCC
T ss_pred EEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCc---cccceeeeeeeccccccccc
Confidence 23344555554 4433 99999999999999987310 155667777765
Q ss_pred ----CeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEE
Q 021657 187 ----AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVS 261 (309)
Q Consensus 187 ----~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s 261 (309)
.|++++|+|++++ |++++.||.|++||++. ..++..+.+|..+|.+++|+|++.+++++
T Consensus 271 ~~~~~v~~~~~sp~~~~-l~s~~~dg~i~iwd~~~---------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 271 QDIYAVNGIAFHPVHGT-LATVGSDGRFSFWDKDA---------------RTKLKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp EEECCEEEEEECTTTCC-EEEEETTSCEEEEETTT---------------TEEEEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred ccccceEEEEEecCCCE-EEEEccCCeEEEEECCC---------------CcEEEEecCCCCCceEEEECCCCCeEEEE
Confidence 7999999999996 57999999999999987 44567778999999999999998876633
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=3.4e-28 Score=198.80 Aligned_cols=225 Identities=13% Similarity=0.132 Sum_probs=173.0
Q ss_pred ccCCCCCcceEEEEECCCCCEE-EEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPTEPYV-LSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l-~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+.+|.. +.+++|+|++++| ++++.|+.|++||+.++
T Consensus 27 ~~~~~~~--~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~---------------------------------------- 64 (391)
T 1l0q_A 27 TIPVGSN--PMGAVISPDGTKVYVANAHSNDVSIIDTATN---------------------------------------- 64 (391)
T ss_dssp EEECSSS--EEEEEECTTSSEEEEEEGGGTEEEEEETTTT----------------------------------------
T ss_pred EeecCCC--cceEEECCCCCEEEEECCCCCeEEEEECCCC----------------------------------------
Confidence 4556654 7899999999976 67889999999999743
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEcCCCc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGSADNS 160 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~ 160 (309)
+.+..+..+. .+.+++|+|++..++++++.++.|++||+.+++ ....+. +...+.+++|+| +++.+ ++++.++.
T Consensus 65 ~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~--~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 65 NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT--VAGTVK-TGKSPLGLALSP-DGKKLYVTNNGDKT 139 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEE-CSSSEEEEEECT-TSSEEEEEETTTTE
T ss_pred eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe--EEEEEe-CCCCcceEEECC-CCCEEEEEeCCCCE
Confidence 2223333333 899999999995555777788999999998877 445544 445789999999 88866 78888999
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
|++||+++ ++.+..+..+ ..+..++|+|++++++++++.++.|++||++.. .....+
T Consensus 140 v~~~d~~~------~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---------------~~~~~~- 196 (391)
T 1l0q_A 140 VSVINTVT------KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---------------SVIDTV- 196 (391)
T ss_dssp EEEEETTT------TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEE-
T ss_pred EEEEECCC------CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---------------eEEEEE-
Confidence 99999998 7777777754 467999999999987778899999999999872 222222
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.+...+.+++|+|++.+++++... ..|+.|++||+. +++++..+..|. .+.+++|+|
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~-----~~~~~v~~~d~~------~~~~~~~~~~~~-~~~~~~~s~ 253 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVD-----KYFNTVSMIDTG------TNKITARIPVGP-DPAGIAVTP 253 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEEC-----SSCCEEEEEETT------TTEEEEEEECCS-SEEEEEECT
T ss_pred ecCCCccceEECCCCCEEEEEecC-----cCCCcEEEEECC------CCeEEEEEecCC-CccEEEEcc
Confidence 345678999999999887765531 134899999998 566666776654 467888876
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.5e-28 Score=203.54 Aligned_cols=232 Identities=9% Similarity=0.036 Sum_probs=182.9
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG 82 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (309)
.+.+|.+ .|.+++|+|++.++++++.|+.|++||++++ +
T Consensus 164 ~~~~~~~-~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~----------------------------------------~ 202 (433)
T 3bws_A 164 KYKKKLG-FVETISIPEHNELWVSQMQANAVHVFDLKTL----------------------------------------A 202 (433)
T ss_dssp HHHTTCC-EEEEEEEGGGTEEEEEEGGGTEEEEEETTTC----------------------------------------C
T ss_pred cccccCC-ceeEEEEcCCCEEEEEECCCCEEEEEECCCc----------------------------------------e
Confidence 3568888 8999999999999999999999999999742 3
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc------
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS------ 156 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------ 156 (309)
.+..+..|...+.+++|+|++..++++++.|+.|++||+++++ ....+.. ...+.+++|+| +++.+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~--~~~~~~~-~~~~~~~~~~~-~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL--EIRKTDK-IGLPRGLLLSK-DGKELYIAQFSASNQ 278 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE--EEEECCC-CSEEEEEEECT-TSSEEEEEEEESCTT
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc--EEEEecC-CCCceEEEEcC-CCCEEEEEECCCCcc
Confidence 3445567888999999999995555777789999999998776 4555443 45699999999 898888887
Q ss_pred --CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 157 --ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 157 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
.||.|++||+++ ++.+..+. +...+.+++|+|++++++++++.|+.|++||++. ..
T Consensus 279 ~~~dg~i~~~d~~~------~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---------------~~ 336 (433)
T 3bws_A 279 ESGGGRLGIYSMDK------EKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---------------KK 336 (433)
T ss_dssp CSCCEEEEEEETTT------TEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTT---------------TE
T ss_pred ccCCCeEEEEECCC------CcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCC---------------Cc
Confidence 588999999998 66666553 4568899999999998888889999999999986 22
Q ss_pred eeeeecCCCcceeeEEEccCCCeEEEEecCC-------CCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 235 LFFQHAGHRDKVVDFHWNASDPWTVVSVSDD-------CDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 235 ~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d-------~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
....+ .+...+.+++|+|++.+++++...+ ..+|+.||.|++||+. +++.+..+.. ...+.+++|
T Consensus 337 ~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~------~~~~~~~~~~-~~~~~~~~~ 408 (433)
T 3bws_A 337 VQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT------TDTVKEFWEA-GNQPTGLDV 408 (433)
T ss_dssp EEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT------TTEEEEEEEC-SSSEEEEEE
T ss_pred EEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC------CCcEEEEecC-CCCCceEEE
Confidence 23333 3567789999999998777665432 0145668999999998 5666666654 457889998
Q ss_pred CC
Q 021657 308 KP 309 (309)
Q Consensus 308 ~P 309 (309)
+|
T Consensus 409 s~ 410 (433)
T 3bws_A 409 SP 410 (433)
T ss_dssp CT
T ss_pred cC
Confidence 87
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=198.15 Aligned_cols=197 Identities=10% Similarity=0.078 Sum_probs=143.1
Q ss_pred CCCCcceEEEEECC--CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 6 GHQDNAEFALAMCP--TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 6 ~H~~~~V~~~~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+|.+ +|.+++|+| ++++|++|+.||+|++||++++..
T Consensus 123 ~~~~-~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---------------------------------------- 161 (343)
T 3lrv_A 123 DSAN-EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---------------------------------------- 161 (343)
T ss_dssp CCSS-CEEEEECCC---CCEEEEEETTCCEEEEESSSSCE----------------------------------------
T ss_pred CCCC-CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE----------------------------------------
Confidence 5657 899999999 999999999999999999985422
Q ss_pred cccc-ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-cCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 84 RGIY-NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 84 ~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.... ..|...|.+++|+|++ .+|++|+.||.|++||+++++.. ...+.. |..+|++++|+| ++.+|++++ |+.|
T Consensus 162 ~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v 237 (343)
T 3lrv_A 162 YIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTV 237 (343)
T ss_dssp EEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBE
T ss_pred EEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeE
Confidence 1222 2355679999999998 89999999999999999988732 155666 999999999999 999999999 5599
Q ss_pred EEEecCCCCCCCCCCceeeecc---CCCCee--EEEEecCCCcEEEEecC-CCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 162 RMFDRRNLTSNGVGSPINKFEG---HSAAVL--CVQWSPDKSSVFGSSAE-DGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~---~~~~v~--~~~~~~~~~~l~~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
++||+++ .+.+..+.. +...+. +++|+|+++++ ++++. |+.+++|++....+.
T Consensus 238 ~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~~~s~~d~~i~v~~~~~~~~~-------------- 296 (343)
T 3lrv_A 238 VCFDLRK------DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM-IAYSNESNSLTIYKFDKKTKN-------------- 296 (343)
T ss_dssp EEEETTS------STTCBSSCCCBC-----CCEEEEECTTSSEE-EEEETTTTEEEEEEECTTTCS--------------
T ss_pred EEEEcCC------CCcceeecccccccccccceEEEECCCCCEE-EEecCCCCcEEEEEEcccccc--------------
Confidence 9999998 555444432 334444 69999999974 56666 999999999762221
Q ss_pred eeeecCCCcceeeEEEcc---CCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 236 FFQHAGHRDKVVDFHWNA---SDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~---~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
... .++..+.|.| +...++ +++. |+.+.++-..
T Consensus 297 -~~~----~~~~~~~~~~~~~~~~~l~-~~~~-------d~~~~~~~~~ 332 (343)
T 3lrv_A 297 -WTK----DEESALCLQSDTADFTDMD-VVCG-------DGGIAAILKT 332 (343)
T ss_dssp -EEE----EEEEECCC----CCCCEEE-EEEE-------TTEEEEEEEC
T ss_pred -eEe----cCceeEecCccccccceeE-EEec-------CCceEEEEec
Confidence 111 4566777776 555444 3333 3777776544
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.2e-27 Score=196.62 Aligned_cols=226 Identities=12% Similarity=0.072 Sum_probs=170.5
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCC---cEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDK---SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+.|.+|.+ .|.+++|+|+|++|++++.|+ .|++||++++.
T Consensus 172 ~~l~~~~~-~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~------------------------------------ 214 (415)
T 2hqs_A 172 FVVHRSPQ-PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA------------------------------------ 214 (415)
T ss_dssp EEEEEESS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC------------------------------------
T ss_pred EEEeCCCC-cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc------------------------------------
Confidence 45678888 899999999999999999885 99999997531
Q ss_pred CCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCe--EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 79 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC--LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 79 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
...+..|...+.+++|+|+|..++++++.++. |++||+.+++ ...+..|...+.+++|+| +++.|++++
T Consensus 215 -----~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~sp-dg~~l~~~s 285 (415)
T 2hqs_A 215 -----VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ---IRQVTDGRSNNTEPTWFP-DSQNLAFTS 285 (415)
T ss_dssp -----EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---EEECCCCSSCEEEEEECT-TSSEEEEEE
T ss_pred -----EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC---EEeCcCCCCcccceEECC-CCCEEEEEE
Confidence 12345577789999999999444447776654 9999998876 356667888999999999 999888877
Q ss_pred C-CC--cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC--CCcEEEEeCCcccccccCCCCCcCC
Q 021657 157 A-DN--SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE--DGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 157 ~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
. ++ .|++||+.+ ++ ...+..+...+.+++|+|+|++|+.++.. +..|++||+... +
T Consensus 286 ~~~g~~~i~~~d~~~------~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~-~----------- 346 (415)
T 2hqs_A 286 DQAGRPQVYKVNING------GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG-G----------- 346 (415)
T ss_dssp CTTSSCEEEEEETTS------SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC-C-----------
T ss_pred CCCCCcEEEEEECCC------CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC-C-----------
Confidence 5 45 677778876 44 34455566788999999999976544444 358999999861 1
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
. ..+..+. .+.+++|+|++..++.++.++ ....|++||+. +..+..+..|.+.|.+++|+|
T Consensus 347 ---~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~-----~~~~l~~~d~~-------g~~~~~l~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 347 ---V-QVLSSTF-LDETPSLAPNGTMVIYSSSQG-----MGSVLNLVSTD-------GRFKARLPATDGQVKFPAWSP 407 (415)
T ss_dssp ---E-EECCCSS-SCEEEEECTTSSEEEEEEEET-----TEEEEEEEETT-------SCCEEECCCSSSEEEEEEECC
T ss_pred ---E-EEecCCC-CcCCeEEcCCCCEEEEEEcCC-----CccEEEEEECC-------CCcEEEeeCCCCCCcCCcccc
Confidence 1 2233443 789999999998766544332 01279999986 445677889999999999998
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=9.7e-28 Score=198.69 Aligned_cols=221 Identities=12% Similarity=0.130 Sum_probs=174.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
+.+++|+|++.++++++.|+.|++||+.++...... ....+.+|.
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-----------------------------------~~~~~~~~~ 169 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLS-----------------------------------PPEKYKKKL 169 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEEC-----------------------------------CCHHHHTTC
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeec-----------------------------------CcccccccC
Confidence 468999998888889999999999999854322111 112456788
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEcCCCcEEEEecCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~ 170 (309)
..|.+++|++++ .++++++.|+.|++||+.+++ ....+..|...+.+++|+| +++.+ ++++.|+.|++||+++
T Consensus 170 ~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~-- 243 (433)
T 3bws_A 170 GFVETISIPEHN-ELWVSQMQANAVHVFDLKTLA--YKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKT-- 243 (433)
T ss_dssp CEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCC--EEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTT--
T ss_pred CceeEEEEcCCC-EEEEEECCCCEEEEEECCCce--EEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCC--
Confidence 999999999988 899999999999999998877 6677778889999999999 77766 5666899999999998
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec--------CCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA--------EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
++.+..+.. ...+.+++|+|+++.++ +++ .|+.|++||++.. .... ...|
T Consensus 244 ----~~~~~~~~~-~~~~~~~~~~~~g~~l~-~~~~~~~~~~~~dg~i~~~d~~~~---------------~~~~-~~~~ 301 (433)
T 3bws_A 244 ----KLEIRKTDK-IGLPRGLLLSKDGKELY-IAQFSASNQESGGGRLGIYSMDKE---------------KLID-TIGP 301 (433)
T ss_dssp ----TEEEEECCC-CSEEEEEEECTTSSEEE-EEEEESCTTCSCCEEEEEEETTTT---------------EEEE-EEEE
T ss_pred ----CcEEEEecC-CCCceEEEEcCCCCEEE-EEECCCCccccCCCeEEEEECCCC---------------cEEe-eccC
Confidence 777777765 45689999999999765 554 5889999999862 1222 2345
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
...+..++|+|+++.++++++.| +.|++||+. +++.+..+. +...+.+++|+|
T Consensus 302 ~~~~~~~~~~~~g~~l~~~~~~~-------~~v~v~d~~------~~~~~~~~~-~~~~~~~~~~s~ 354 (433)
T 3bws_A 302 PGNKRHIVSGNTENKIYVSDMCC-------SKIEVYDLK------EKKVQKSIP-VFDKPNTIALSP 354 (433)
T ss_dssp EECEEEEEECSSTTEEEEEETTT-------TEEEEEETT------TTEEEEEEE-CSSSEEEEEECT
T ss_pred CCCcceEEECCCCCEEEEEecCC-------CEEEEEECC------CCcEEEEec-CCCCCCeEEEcC
Confidence 56789999999998888866665 999999998 555555554 667788999886
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=2.7e-26 Score=187.55 Aligned_cols=206 Identities=10% Similarity=0.142 Sum_probs=160.3
Q ss_pred CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEec
Q 021657 22 PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCP 101 (309)
Q Consensus 22 ~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 101 (309)
.++++++.|+.|++||++++ +.+..+..|. .+.+++|+|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~----------------------------------------~~~~~~~~~~-~~~~~~~s~ 41 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN----------------------------------------KVTATIPVGS-NPMGAVISP 41 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT----------------------------------------EEEEEEECSS-SEEEEEECT
T ss_pred EEEEEcCCCCEEEEEECCCC----------------------------------------eEEEEeecCC-CcceEEECC
Confidence 46789999999999999743 2333444454 589999999
Q ss_pred CCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEcCCCcEEEEecCCCCCCCCCCceee
Q 021657 102 SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGSADNSVRMFDRRNLTSNGVGSPINK 180 (309)
Q Consensus 102 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 180 (309)
++..++++++.|+.|++||+.+++ ....+..+. .+.+++|+| +++++ ++++.++.|++||+.+ ++.+..
T Consensus 42 dg~~l~~~~~~d~~i~v~d~~~~~--~~~~~~~~~-~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~------~~~~~~ 111 (391)
T 1l0q_A 42 DGTKVYVANAHSNDVSIIDTATNN--VIATVPAGS-SPQGVAVSP-DGKQVYVTNMASSTLSVIDTTS------NTVAGT 111 (391)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTE--EEEEEECSS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTT------TEEEEE
T ss_pred CCCEEEEECCCCCeEEEEECCCCe--EEEEEECCC-CccceEECC-CCCEEEEEECCCCEEEEEECCC------CeEEEE
Confidence 995556888899999999998877 555555444 899999999 88866 4556779999999998 777777
Q ss_pred eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEE
Q 021657 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 181 ~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 260 (309)
+.. ...+.+++|+|++++++++++.|+.|++||++. .+....+..+ ..+..++|+|++.++++
T Consensus 112 ~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~---------------~~~~~~~~~~-~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 112 VKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT---------------KAVINTVSVG-RSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp EEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---------------TEEEEEEECC-SSEEEEEECTTSSEEEE
T ss_pred EeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---------------CcEEEEEecC-CCcceEEECCCCCEEEE
Confidence 764 456899999999998777999999999999987 2333444444 45699999999998877
Q ss_pred EecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 261 SVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 261 s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+++.| +.|++||+. +++++..+. +...+.+++|+|
T Consensus 175 ~~~~~-------~~v~~~d~~------~~~~~~~~~-~~~~~~~~~~~~ 209 (391)
T 1l0q_A 175 ANFDS-------MSISVIDTV------TNSVIDTVK-VEAAPSGIAVNP 209 (391)
T ss_dssp EETTT-------TEEEEEETT------TTEEEEEEE-CSSEEEEEEECT
T ss_pred EeCCC-------CEEEEEECC------CCeEEEEEe-cCCCccceEECC
Confidence 66655 999999998 455555544 566888888886
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.1e-27 Score=184.28 Aligned_cols=157 Identities=13% Similarity=0.144 Sum_probs=115.3
Q ss_pred CCCCCcceEEEEECC---CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 5 TGHQDNAEFALAMCP---TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~---~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+|.. .++.++|+| ++.+|++|+.|++|+|||++++
T Consensus 175 ~~~~~-~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG---------------------------------------- 213 (356)
T 2w18_A 175 FLMPP-EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG---------------------------------------- 213 (356)
T ss_dssp EECCC-SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC----------------------------------------
T ss_pred ccCCC-ceeeEEeeccCCCCceEEEecCCCcEEEEECCCC----------------------------------------
Confidence 34554 455556655 5577889999999999999854
Q ss_pred Cccccccccc---CCeEEEEEecCCCcEE------------EEEcCCCeEEEEEcCCCCcceEEEe-----eccCCceeE
Q 021657 82 GPRGIYNGHE---DTVEDVTFCPSSAQEF------------CSVGDDSCLILWDARVGTSPVIKVE-----KAHDADLHC 141 (309)
Q Consensus 82 ~~~~~~~~~~---~~v~~~~~~~~~~~~l------------~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~ 141 (309)
+.++.+.+|. ..+.+++|+|++ .++ ++|+.|++|++||..+++ ....+ .+|...+.+
T Consensus 214 k~l~tL~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk--~l~v~~~~~p~Gh~~~~ls 290 (356)
T 2w18_A 214 QLLKKMHIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQLIVINPKTTL--SVGVMLYCLPPGQAGRFLE 290 (356)
T ss_dssp CEEEEEECCC---CCCEEEEEEETT-EEEEEEC------------CCEEEEEEETTTTE--EEEEEEECCCTTCCCCEEE
T ss_pred cEEEEEcCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEEEEEECCCCE--EEEEEEeeccCCCcceeEc
Confidence 3444554432 467788999988 554 678899999999998877 33332 355555443
Q ss_pred EEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCee-EEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 142 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVL-CVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 142 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
. +. ++.++++++.|++|+|||+.+ ++.+.++.+|...+. +++|+|||++ |++|+.|++|+|||+
T Consensus 291 g--~~-sg~~lASgS~DgTIkIWDl~t------Gk~l~tL~gH~~~vvs~vafSPDG~~-LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 291 G--DV-KDHCAAAILTSGTIAIWDLLL------GQCTALLPPVSDQHWSFVKWSGTDSH-LLAGQKDGNIFVYHY 355 (356)
T ss_dssp E--EE-ETTEEEEEETTSCEEEEETTT------CSEEEEECCC--CCCCEEEECSSSSE-EEEECTTSCEEEEEE
T ss_pred c--cc-CCCEEEEEcCCCcEEEEECCC------CcEEEEecCCCCCeEEEEEECCCCCE-EEEEECCCcEEEecC
Confidence 3 33 477899999999999999999 999999998877655 6899999996 679999999999996
No 127
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=3.9e-26 Score=184.02 Aligned_cols=204 Identities=14% Similarity=0.109 Sum_probs=131.6
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEc
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGS 156 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~ 156 (309)
..+..++.....|...|++++|+|++ .+|++|+.++ +++||+...+ ..... +...+..+++.+ +++.+ ++++
T Consensus 6 ~~~~~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~--~~~~~--~~~~~~~~~~~~-~~~~~~~~~~ 78 (355)
T 3vu4_A 6 MITRNPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVA--HIMSQ--EMRHLSKVRMLH-RTNYVAFVTG 78 (355)
T ss_dssp -------------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEE--EEEEE--ECSCCCEEEECT-TSSEEEEECS
T ss_pred ccccCCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcc--eeeee--ecCCeEEEEEcC-CCCEEEEEEC
Confidence 34455666678899999999999999 7899888775 7899987655 22222 223578888988 66666 6678
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCc----------------------------------EEE
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS----------------------------------VFG 202 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------------------------------l~~ 202 (309)
.|+.|++||+++ ++.+..+. +...|.+++++++... +++
T Consensus 79 ~d~~v~iWd~~~------~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la 151 (355)
T 3vu4_A 79 VKEVVHIWDDVK------KQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLV 151 (355)
T ss_dssp STTEEEEEETTT------TEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEE
T ss_pred CccEEEEEECCC------CcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEE
Confidence 889999999998 78888877 5668888888876310 111
Q ss_pred E--ecCCCcEEEEeCCcccccccCCCCCcCCCCce-eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCe-EEEE
Q 021657 203 S--SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL-FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGT-LQIW 278 (309)
Q Consensus 203 ~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~-v~vw 278 (309)
. |+.||.|++||++..................+ +..+.+|...|.+++|+|++.+ ++++| .|++ |++|
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s~s-------~d~~~v~iw 223 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VATCS-------QDGTIIRVF 223 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE-EEEEE-------TTCSEEEEE
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE-EEEEe-------CCCCEEEEE
Confidence 1 34445555555443111000000000000012 5678899999999999998775 55444 4598 9999
Q ss_pred EccccccCChhhHhHhhh-c-ccceEEEeeeCC
Q 021657 279 RMSDLIYRPQDEVLAELE-K-FKAHVISCTSKP 309 (309)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~P 309 (309)
|+. +++++.++. + |.+.|.+++|+|
T Consensus 224 d~~------~~~~~~~~~~g~h~~~v~~~~~s~ 250 (355)
T 3vu4_A 224 KTE------DGVLVREFRRGLDRADVVDMKWST 250 (355)
T ss_dssp ETT------TCCEEEEEECTTCCSCEEEEEECT
T ss_pred ECC------CCcEEEEEEcCCCCCcEEEEEECC
Confidence 999 678888887 5 999999999998
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=3.8e-25 Score=181.76 Aligned_cols=257 Identities=13% Similarity=0.078 Sum_probs=177.5
Q ss_pred ceEEEEECCCCC-EEEEec----CCC----cEEEEeC--Cccccccc--c--CCcccc----cc--------C-----CC
Q 021657 11 AEFALAMCPTEP-YVLSGG----KDK----SVVLWSI--QDHITSSA--T--DPATAK----SA--------G-----SS 58 (309)
Q Consensus 11 ~V~~~~~~~~~~-~l~t~~----~dg----~i~vwd~--~~~~~~~~--~--~~~~~~----~~--------~-----~~ 58 (309)
.|...+|.+.|. ++++|+ .|| +|+|||+ .++..... . ...... .. . ..
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 566778888775 566776 567 8999999 76643311 1 110000 00 0 01
Q ss_pred CceeecCCCCCC---CCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCC---eEEEEEcCCCCcceEEEe
Q 021657 59 GSIIKQSPKPGD---GNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS---CLILWDARVGTSPVIKVE 132 (309)
Q Consensus 59 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~ 132 (309)
..+........+ ..+.+|+... .....+.+|...+.+++|+|+| +.|++++.++ .|++||+.+++ . ..+
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~--~-~~l 218 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGA--V-RQV 218 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCC--E-EEE
T ss_pred CEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCc--E-EEe
Confidence 122222222223 6888998864 4567778899999999999999 7788888775 99999999887 3 345
Q ss_pred eccCCceeEEEeccCCCCeEE-EEcCCCc--EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC-
Q 021657 133 KAHDADLHCVDWNPLDDNLIL-TGSADNS--VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG- 208 (309)
Q Consensus 133 ~~~~~~v~~~~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg- 208 (309)
..|...+.+++|+| +++.|+ +++.++. |++||+++ ++. ..+..+...+.+++|+|||+++++++..++
T Consensus 219 ~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~------~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 219 ASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLAS------GQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 290 (415)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTT------CCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred ecCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCC------CCE-EeCcCCCCcccceEECCCCCEEEEEECCCCC
Confidence 67788999999999 888777 6666654 99999987 544 567778888999999999997654544455
Q ss_pred -cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCC
Q 021657 209 -LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP 287 (309)
Q Consensus 209 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~ 287 (309)
.|++||+... + ...+..+...+.+++|+|++.+++.+..++ .+..|++||+.
T Consensus 291 ~~i~~~d~~~~-~---------------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~-----g~~~i~~~d~~------ 343 (415)
T 2hqs_A 291 PQVYKVNINGG-A---------------PQRITWEGSQNQDADVSSDGKFMVMVSSNG-----GQQHIAKQDLA------ 343 (415)
T ss_dssp CEEEEEETTSS-C---------------CEECCCSSSEEEEEEECTTSSEEEEEEECS-----SCEEEEEEETT------
T ss_pred cEEEEEECCCC-C---------------EEEEecCCCcccCeEECCCCCEEEEEECcC-----CceEEEEEECC------
Confidence 5667787651 1 122344667889999999999877655442 24689999998
Q ss_pred hhhHhHhhhcccceEEEeeeCC
Q 021657 288 QDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 288 ~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+++. ..+..|. .+.+++|+|
T Consensus 344 ~~~~-~~l~~~~-~~~~~~~sp 363 (415)
T 2hqs_A 344 TGGV-QVLSSTF-LDETPSLAP 363 (415)
T ss_dssp TCCE-EECCCSS-SCEEEEECT
T ss_pred CCCE-EEecCCC-CcCCeEEcC
Confidence 3333 3455554 788888887
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=2e-25 Score=183.97 Aligned_cols=228 Identities=15% Similarity=0.208 Sum_probs=155.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.++.+++++++.++++++.|+ ++||+............ . ...+ ...... ....+
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~--------~-------------~~~~---~~~~~~-~~~~~ 91 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGD--------D-------------PNKI---VDKVQG-LLVPM 91 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTC--------C-------------TTCE---EECCCC-EEECC
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhccccc--------C-------------cccc---cccCcc-ccccC
Confidence 478999999999999999888 99998753211000000 0 0000 000001 11235
Q ss_pred cCCeEEEEEecCCCcEEE----EEcCCCeEEEEEcCCC-----Cc--c--eEEEeeccCCceeEEEeccCCCCeEEEEcC
Q 021657 91 EDTVEDVTFCPSSAQEFC----SVGDDSCLILWDARVG-----TS--P--VIKVEKAHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~----s~~~dg~i~iwd~~~~-----~~--~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
...|.+++|+|++ .+|+ +|+.|+.|++||+.+. +. + ....+.+|...|.+++|+|..+.+|++++.
T Consensus 92 ~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 92 KFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp SSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 6789999999998 6777 8889999999998654 11 0 134556789999999999944889999999
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
||+|++||+++ +..+.....|...|++++|+|+|.+ |++|+.||.|++||++. ...... .. ...
T Consensus 171 Dg~v~iwD~~~------~~~~~~~~~~~~~v~~v~wspdg~~-lasgs~dg~v~iwd~~~-~~~~~~-~~-------~~~ 234 (434)
T 2oit_A 171 DGSIAVLQVTE------TVKVCATLPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPTL-QEKKVI-PC-------PPF 234 (434)
T ss_dssp TSCEEEEEESS------SEEEEEEECGGGCEEEEEECTTSSC-EEEEETTSCEEEECTTC-CEEEEE-CC-------CTT
T ss_pred CCeEEEEEcCC------CcceeeccCCCCceeEEEEcCCCCE-EEEEcCCCcEEEEccCC-cccccc-cC-------Ccc
Confidence 99999999998 6666666678889999999999997 56999999999999983 111000 00 000
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
....|...|.++.|++++.++++..+.|. .-.....+++|++..
T Consensus 235 ~~~~~~~~v~~v~w~~~~~~l~~~~~~dg-~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 235 YESDHPVRVLDVLWIGTYVFAIVYAAADG-TLETSPDVVMALLPK 278 (434)
T ss_dssp CCTTSCEEEEEEEEEETTEEEEEEEETTC-CSSSCCEEEEEECCC
T ss_pred cCCCCceeEEEEEEecCceEEEEEccCCC-ccCCCCceEEEEecc
Confidence 01134558999999997766555443320 001123499999984
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=1.2e-24 Score=179.28 Aligned_cols=169 Identities=12% Similarity=0.145 Sum_probs=129.5
Q ss_pred ceEEEEECCCCCEEE----EecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 11 AEFALAMCPTEPYVL----SGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~----t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
.|++++|+|++++|+ +|+.|+.|+|||+.+........ .........
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~ 144 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQ-----------------------------KRPFAYHKL 144 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSS-----------------------------CCCSEEEEC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCC-----------------------------cceeeeeec
Confidence 699999999999999 89999999999987531100000 000112345
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
+.+|...|.+++|+|+++.+|++++.||+|++||++++. ......+|...|.+++|+| ++++|++|+.||.|++||+
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--KVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--EEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECT
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--ceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEcc
Confidence 667999999999999855899999999999999998875 4555567889999999999 8999999999999999999
Q ss_pred CCCCCCCCCCceeeecc-------CCCCeeEEEEecCCCcEEEEecCCCc------EEEEeCCcc
Q 021657 167 RNLTSNGVGSPINKFEG-------HSAAVLCVQWSPDKSSVFGSSAEDGL------LNIWDYEKV 218 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~dg~------i~iwd~~~~ 218 (309)
+. +....+.. |...+.+++|++++.++++....||. +++|++++.
T Consensus 222 ~~-------~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 222 TL-------QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TC-------CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CC-------cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 82 22333332 23378999999998866555555543 899999873
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=3.1e-25 Score=174.04 Aligned_cols=234 Identities=15% Similarity=0.106 Sum_probs=163.3
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCc-cccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+..|.+ .|.+++|+|++++|++++ ++.|++||+.+ +.
T Consensus 36 ~~~~~~~-~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~--------------------------------------- 74 (297)
T 2ojh_A 36 VVWQTPE-LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS--------------------------------------- 74 (297)
T ss_dssp EEEEESS-CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS---------------------------------------
T ss_pred eeccCCc-ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC---------------------------------------
Confidence 3456777 799999999999999887 88999999975 31
Q ss_pred Ccccccccc-cCCeEEEEEecCCCcEEEEEc--CCCeEEEEEc--CCCCcceEEEeeccCCceeEEEeccCCCCeEE-EE
Q 021657 82 GPRGIYNGH-EDTVEDVTFCPSSAQEFCSVG--DDSCLILWDA--RVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL-TG 155 (309)
Q Consensus 82 ~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~ 155 (309)
.......+ ...+.+++|+|++ .+|++++ .++...||.+ ..+. ...+.. ...+..++|+| +++.|+ ++
T Consensus 75 -~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~-~~~~~~~~~sp-dg~~l~~~~ 147 (297)
T 2ojh_A 75 -PEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGT---PRLMTK-NLPSYWHGWSP-DGKSFTYCG 147 (297)
T ss_dssp -CEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCC---CEECCS-SSSEEEEEECT-TSSEEEEEE
T ss_pred -ceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCc---eEEeec-CCCccceEECC-CCCEEEEEE
Confidence 11222233 3678899999999 6777777 3345555554 4443 233333 33588999999 888776 77
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
..++.+++|+++.. ......+..+...+.+++|+|+++.+++++..++.+++|+++..+. .
T Consensus 148 ~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~--------------~ 208 (297)
T 2ojh_A 148 IRDQVFDIYSMDID-----SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS--------------S 208 (297)
T ss_dssp EETTEEEEEEEETT-----TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS--------------C
T ss_pred CCCCceEEEEEECC-----CCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC--------------C
Confidence 88999999997542 3345566667788999999999998766666789999999874221 2
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCC-----CCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTG-----GGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~-----~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
...+..|...+..++|+|++.++++.+.++ ... .++.|++||+... ....+..+.+|...+..++|+|
T Consensus 209 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~~~~~~~l~~~d~~~~----~~~~~~~~~~~~~~~~~~~~sp 281 (297)
T 2ojh_A 209 VERITDSAYGDWFPHPSPSGDKVVFVSYDA--DVFDHPRDLDVRVQLMDMDGG----NVETLFDLFGGQGTMNSPNWSP 281 (297)
T ss_dssp EEECCCCSEEEEEEEECTTSSEEEEEEEET--TCCSCCSSEEEEEEEEETTSC----SCEEEEEEEESTTTSCSCCBCT
T ss_pred cEEEecCCcccCCeEECCCCCEEEEEEcCC--CCCcccccCceEEEEEecCCC----CceeeeccCCCCcccccceECC
Confidence 344556777899999999998877654432 000 2367999999832 1122344456777888888876
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=2e-23 Score=168.12 Aligned_cols=258 Identities=9% Similarity=0.071 Sum_probs=182.7
Q ss_pred ceEEEEECCCCCEEEEecC-------CCcEEEEeCCccccccccCC---ccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 11 AEFALAMCPTEPYVLSGGK-------DKSVVLWSIQDHITSSATDP---ATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~-------dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
.+..++|+|+++++++++. ++.|.+||..++........ ............ .+.....++.+.+|+..+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT-LWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTE-EEEEETTTTEEEEEETTT
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCE-EEEEecCCCEEEEEeCCC
Confidence 4679999999998887764 56899999987743332211 111111112111 112223356788888888
Q ss_pred cCcccccccccCC---------eEEEEEecCCCcEEEEE-cCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCC
Q 021657 81 VGPRGIYNGHEDT---------VEDVTFCPSSAQEFCSV-GDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN 150 (309)
Q Consensus 81 ~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 150 (309)
.+.+..+..+... +.++.|+|++..+++++ +.++.|.+||..+++ ....+..+...+.+++|+| +++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~-dg~ 197 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK--LKTAIQNTGKMSTGLALDS-EGK 197 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE--EEEEECCCCTTCCCCEEET-TTT
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc--eEEEecCCCCccceEEECC-CCC
Confidence 8877666554322 78899999995444444 358899999998877 5555554566689999999 999
Q ss_pred eEEEEcCCCcEEEEecCCCCCCCCCCceeeecc----CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCC
Q 021657 151 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEG----HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 151 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~ 226 (309)
.+++++.++.|.+||+.+ ++.+..+.. +...+..++|+|++++++++...++.|.+||+.+.
T Consensus 198 ~l~~~~~~~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-------- 263 (353)
T 3vgz_A 198 RLYTTNADGELITIDTAD------NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-------- 263 (353)
T ss_dssp EEEEECTTSEEEEEETTT------TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC--------
T ss_pred EEEEEcCCCeEEEEECCC------CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC--------
Confidence 999999999999999998 777766654 45567889999999988777777799999999762
Q ss_pred CCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEee
Q 021657 227 RTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCT 306 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 306 (309)
+.+..+.... ...++|+|++.+++++...+ +.|.+||+. +++.+..+.. ...+.+++
T Consensus 264 -------~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~------~~~~~~~~~~-~~~~~~~~ 320 (353)
T 3vgz_A 264 -------NILAKVAAPE--SLAVLFNPARNEAYVTHRQA-------GKVSVIDAK------SYKVVKTFDT-PTHPNSLA 320 (353)
T ss_dssp -------CEEEEEECSS--CCCEEEETTTTEEEEEETTT-------TEEEEEETT------TTEEEEEEEC-CSEEEEEE
T ss_pred -------cEEEEEEcCC--CceEEECCCCCEEEEEECCC-------CeEEEEECC------CCeEEEEEec-CCCCCeEE
Confidence 2222222222 25799999999888766555 899999998 5666655553 34678888
Q ss_pred eCC
Q 021657 307 SKP 309 (309)
Q Consensus 307 ~~P 309 (309)
|+|
T Consensus 321 ~s~ 323 (353)
T 3vgz_A 321 LSA 323 (353)
T ss_dssp ECT
T ss_pred EcC
Confidence 876
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=2.6e-23 Score=175.91 Aligned_cols=225 Identities=9% Similarity=0.058 Sum_probs=163.2
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeC--CccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSI--QDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
+.+++|+|+|++|++++.|++|++||+ .+. +.+..+.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~----------------------------------------~~~~~i~- 219 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEP----------------------------------------TKVAEIK- 219 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSC----------------------------------------EEEEEEE-
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCC----------------------------------------cEEEEEe-
Confidence 789999999999999999999999999 432 2233344
Q ss_pred ccCCeEEEEEec----CCCcEEEEEc-CCCeEEEEEcCCCCcceEEEeec----------cC-CceeEEEeccCCCCeEE
Q 021657 90 HEDTVEDVTFCP----SSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKA----------HD-ADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 90 ~~~~v~~~~~~~----~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~~~~l~ 153 (309)
+...+..++|+| +| +++++++ .+++|.+||..+.+ ....+.. |. ..+.++.++|....+++
T Consensus 220 ~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~--~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 220 IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLE--PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCC--EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccc--cceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 345678999999 98 5666666 58999999998887 4554433 22 36889999994455677
Q ss_pred EEcCCCcEEEEecCCCCCCCCCCcee--eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 154 TGSADNSVRMFDRRNLTSNGVGSPIN--KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 154 ~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
+...++.|.+||+.+ .+.+. .+. +...+..++|+|+|+++++++..++.|.+||+.+ +
T Consensus 297 s~~~~g~i~vvd~~~------~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g------------ 356 (543)
T 1nir_A 297 NVKETGKVLLVNYKD------IDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-R------------ 356 (543)
T ss_dssp EETTTTEEEEEECTT------SSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-T------------
T ss_pred EECCCCeEEEEEecC------CCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC-C------------
Confidence 778899999999987 33333 443 4567889999999998887888899999999987 2
Q ss_pred CCceeeeecC----CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccc-cCChhhHhHhhhcccceEEEee
Q 021657 232 PAGLFFQHAG----HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLI-YRPQDEVLAELEKFKAHVISCT 306 (309)
Q Consensus 232 ~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~-~~~~~~~~~~~~~h~~~v~~~~ 306 (309)
+++..+.. |......+ ++|++..++++++. .|++|.+||+.... .....+++++++.|.+.+..++
T Consensus 357 --~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~------~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 357 --RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHL------GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp --EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBS------SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred --eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccC------CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEE
Confidence 22223322 44333333 47876677776541 23899999998310 0111678888998888888888
Q ss_pred eCC
Q 021657 307 SKP 309 (309)
Q Consensus 307 ~~P 309 (309)
+||
T Consensus 428 ~~p 430 (543)
T 1nir_A 428 THP 430 (543)
T ss_dssp CCT
T ss_pred cCC
Confidence 887
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.2e-22 Score=160.59 Aligned_cols=246 Identities=10% Similarity=0.000 Sum_probs=164.7
Q ss_pred CCCCCcceEEEEECCCCCEEEEecC-CCcEEEEeCCcccc-cccc----CCccccccCCCCceeecCCCCCCC--CcccC
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGK-DKSVVLWSIQDHIT-SSAT----DPATAKSAGSSGSIIKQSPKPGDG--NDKAA 76 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~-dg~i~vwd~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 76 (309)
..+.. .+ .++|+|++++|++++. ++.|.+||+.++.. .... .+............... ...... .+.+|
T Consensus 37 ~~~~~-~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 37 TLGYD-FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVT-VTGLNHPFNMQSY 113 (331)
T ss_dssp ECCCC-EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEE-CCCSSSSCEEEEE
T ss_pred EccCC-cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEE-ecCCCCcccEEEE
Confidence 33444 56 9999999997665554 89999999987653 2111 11110122222222222 222223 89999
Q ss_pred CCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCe-EEEEEcCCCCcceE--EEeeccCCceeEEEeccCCCCeE-
Q 021657 77 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC-LILWDARVGTSPVI--KVEKAHDADLHCVDWNPLDDNLI- 152 (309)
Q Consensus 77 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l- 152 (309)
+..+.+.+..+..+ ....+++|+|+|..++++...++. |.+|++........ ............++|+| +++++
T Consensus 114 d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~ 191 (331)
T 3u4y_A 114 SFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAF 191 (331)
T ss_dssp ETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEE
T ss_pred ECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEE
Confidence 99888777766544 456899999999556666677788 99999975442111 11223445689999999 88854
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCc---eeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSP---INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 229 (309)
+++..++.|++||+.+ ++. +..+.. ...+..++|+|+|++++++...++.|.+||+.+ ++...
T Consensus 192 v~~~~~~~v~v~d~~~------~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~-~~~~~------ 257 (331)
T 3u4y_A 192 VANLIGNSIGILETQN------PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS-GTLSF------ 257 (331)
T ss_dssp EEETTTTEEEEEECSS------TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT-TEEEE------
T ss_pred EEeCCCCeEEEEECCC------CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC-Cceee------
Confidence 5555689999999988 666 666664 456789999999998777777788999999986 22100
Q ss_pred CCCCceeeeec----CCCc---ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 230 NYPAGLFFQHA----GHRD---KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 230 ~~~~~~~~~~~----~~~~---~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+..+. .+.. ....++|+|++.++++++..+ +.|.+||+..
T Consensus 258 ------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-------~~v~v~d~~~ 304 (331)
T 3u4y_A 258 ------VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS-------RELKVFTISG 304 (331)
T ss_dssp ------EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT-------TEEEEEETTS
T ss_pred ------ecccccccccCCCCcccccceEECCCCCEEEEecCCC-------CcEEEEEecC
Confidence 11111 1112 225689999999988866655 8999999984
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=8.1e-23 Score=163.77 Aligned_cols=242 Identities=8% Similarity=0.071 Sum_probs=153.9
Q ss_pred CCCcceEEEEECCCCCEEEEecCC-CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKD-KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
|.. .+.+++|+|++++|++++.+ +.|++|++.... .....+.
T Consensus 36 ~~~-~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~------------------------------------~~~~~~~ 78 (343)
T 1ri6_A 36 VPG-QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD------------------------------------GALTFAA 78 (343)
T ss_dssp CSS-CCCCEEECTTSSEEEEEETTTTEEEEEEECTTT------------------------------------CCEEEEE
T ss_pred cCC-CCceEEECCCCCEEEEeecCCCeEEEEEecCCC------------------------------------Cceeecc
Confidence 455 57899999999988888876 999999986210 0111122
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-ceEEEeeccCCceeEEEeccCCCCeEEEEc-CCCcEEE
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-PVIKVEKAHDADLHCVDWNPLDDNLILTGS-ADNSVRM 163 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i 163 (309)
.+..+. .+..++|+|++..+++++..++.|.+||+..+.. ...... .....+.+++|+| +++++++++ .++.|++
T Consensus 79 ~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~ 155 (343)
T 1ri6_A 79 ESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISP-DNRTLWVPALKQDRICL 155 (343)
T ss_dssp EEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECT-TSSEEEEEEGGGTEEEE
T ss_pred ccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-cCCCCceEEEECC-CCCEEEEecCCCCEEEE
Confidence 233233 6789999999944555666689999999953221 123333 3345689999999 888777776 8999999
Q ss_pred EecCCCCCCCCCCcee--eecc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 164 FDRRNLTSNGVGSPIN--KFEG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
||+.+... ...+. .+.. ....+..++|+|+++++++++..++.|.+|++......... ...+....
T Consensus 156 ~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~--------~~~~~~~~ 224 (343)
T 1ri6_A 156 FTVSDDGH---LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC--------VQTLDMMP 224 (343)
T ss_dssp EEECTTSC---EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE--------EEEEECSC
T ss_pred EEecCCCc---eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE--------EeeccccC
Confidence 99986210 11111 2222 34578899999999987777778999999999642111000 00111111
Q ss_pred -C--CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 241 -G--HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 241 -~--~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+ ....+..++|+|++.+++++.+.| +.|.+|++.... ...+.+..+..+.. +..++|+|
T Consensus 225 ~~~~~~~~~~~i~~s~dg~~l~v~~~~~-------~~i~v~d~~~~~--~~~~~~~~~~~~~~-~~~~~~s~ 286 (343)
T 1ri6_A 225 ENFSDTRWAADIHITPDGRHLYACDRTA-------SLITVFSVSEDG--SVLSKEGFQPTETQ-PRGFNVDH 286 (343)
T ss_dssp TTCCSCCCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTS--CCEEEEEEEECSSS-CCCEEECT
T ss_pred ccccccCCccceEECCCCCEEEEEecCC-------CEEEEEEEcCCC--CceEEeeeecCCCc-cceEEECC
Confidence 1 133567899999999888766555 999999997210 01222333333333 56666665
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=9.2e-23 Score=179.92 Aligned_cols=257 Identities=12% Similarity=0.058 Sum_probs=170.8
Q ss_pred ceEEEEECCCCCEEEEecC-CC-----cEEEEeCCccccccccCC----------------------------ccccccC
Q 021657 11 AEFALAMCPTEPYVLSGGK-DK-----SVVLWSIQDHITSSATDP----------------------------ATAKSAG 56 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~-dg-----~i~vwd~~~~~~~~~~~~----------------------------~~~~~~~ 56 (309)
.|.+++|+|||++|++++. |+ .|++||+.++........ ......+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 5899999999999999998 88 899999988743221111 0111122
Q ss_pred CCCceeecCCCCCCCCcccCCCCCcC--cccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec
Q 021657 57 SSGSIIKQSPKPGDGNDKAADGPSVG--PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA 134 (309)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 134 (309)
.......+... +.+.+|+..+.. ....+..|...+..++|+|+| +.|+.++ ++.|++||+.+++ .......
T Consensus 118 pDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g~--~~~~~~~ 190 (741)
T 2ecf_A 118 PDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASGR--QMQLTAD 190 (741)
T ss_dssp TTSSEEEEEET---TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTTE--EEECCCC
T ss_pred CCCCEEEEEeC---CcEEEEECCCCCcceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCCC--EEEeccC
Confidence 22222222211 778888887763 445677788899999999999 6677776 4689999998766 3333322
Q ss_pred cCCc----------------eeEEEeccCCCCeEEEEcCCC---------------------------------cEEEEe
Q 021657 135 HDAD----------------LHCVDWNPLDDNLILTGSADN---------------------------------SVRMFD 165 (309)
Q Consensus 135 ~~~~----------------v~~~~~~~~~~~~l~~~~~dg---------------------------------~i~i~d 165 (309)
+... +.+++|+| ++++|++++.|+ .|++||
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 3222 47899999 999999987765 788889
Q ss_pred cCC-CCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec----CCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 166 RRN-LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA----EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
+.+ .. ...+.....+...+..++| |||++|++++. .+..|++||+.+. + ......
T Consensus 270 ~~~~~~----~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g-~--------------~~~~~~ 329 (741)
T 2ecf_A 270 PAEQAQ----TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN-Q--------------QRVLAH 329 (741)
T ss_dssp SSTTCC----CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC-C--------------EEEEEE
T ss_pred CCCCCc----eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC-c--------------eEEEEE
Confidence 875 32 1111111146678999999 99998654432 3577999999872 1 222222
Q ss_pred CCCc----ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEe-eeCC
Q 021657 241 GHRD----KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISC-TSKP 309 (309)
Q Consensus 241 ~~~~----~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~~P 309 (309)
.+.. .+..++|+|++. ++++++.| |.++||.+.. .+. +..+..|...|..+ .|+|
T Consensus 330 ~~~~~~~~~~~~~~~spdg~-~~~~~~~~-------g~~~l~~~~~-----~~~-~~~l~~~~~~v~~~~~~s~ 389 (741)
T 2ecf_A 330 ETSPTWVPLHNSLRFLDDGS-ILWSSERT-------GFQHLYRIDS-----KGK-AAALTHGNWSVDELLAVDE 389 (741)
T ss_dssp EECSSCCCCCSCCEECTTSC-EEEEECTT-------SSCEEEEECS-----SSC-EEESCCSSSCEEEEEEEET
T ss_pred cCCCCcCCcCCceEECCCCe-EEEEecCC-------CccEEEEEcC-----CCC-eeeeeecceEEEeEeEEeC
Confidence 2222 456899999988 56655544 8888888762 233 56677777778776 4776
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.4e-21 Score=155.97 Aligned_cols=220 Identities=10% Similarity=0.108 Sum_probs=154.1
Q ss_pred EEECCCCCE-EEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCC
Q 021657 15 LAMCPTEPY-VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDT 93 (309)
Q Consensus 15 ~~~~~~~~~-l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (309)
..|.+++.+ +++++.++.|++||+.++. ....+..+...
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~----------------------------------------~~~~~~~~~~~ 42 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE----------------------------------------ILNQITLGYDF 42 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC----------------------------------------EEEEEECCCCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc----------------------------------------eeeeEEccCCc
Confidence 346665555 7788899999999997532 22233334455
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC---cEEEEecCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN---SVRMFDRRNLT 170 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~ 170 (309)
+ .++|+|++..+++++..++.|.+||+.+++. .......+..+..+++|+| ++++++++..++ .|.+||+.+
T Consensus 43 ~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~-- 117 (331)
T 3u4y_A 43 V-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLK-- 117 (331)
T ss_dssp E-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTT--
T ss_pred c-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCC--
Confidence 6 9999999955566666689999999988873 1555555666665699999 999888665553 899999998
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCc-EEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
++.+..+.. ......++|+|+|++++++...++. |.+|++...+.... .. ............+
T Consensus 118 ----~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~---------~~--~~~~~~~~~~~~~ 181 (331)
T 3u4y_A 118 ----NKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD---------TG--QEFISGGTRPFNI 181 (331)
T ss_dssp ----TEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE---------EE--EEEECSSSSEEEE
T ss_pred ----CCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee---------cC--CccccCCCCccce
Confidence 777777764 4456899999999988877777788 99999986332211 00 1111334457899
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhH---hHhhhcccceEEEeeeCC
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEV---LAELEKFKAHVISCTSKP 309 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~---~~~~~~h~~~v~~~~~~P 309 (309)
+|+|++.+++++...+ +.|++||+. +++. +..+.. ...+..++|+|
T Consensus 182 ~~spdg~~l~v~~~~~-------~~v~v~d~~------~~~~~~~~~~~~~-~~~~~~~~~sp 230 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIG-------NSIGILETQ------NPENITLLNAVGT-NNLPGTIVVSR 230 (331)
T ss_dssp EECTTSSEEEEEETTT-------TEEEEEECS------STTSCEEEEEEEC-SSCCCCEEECT
T ss_pred EECCCCCEEEEEeCCC-------CeEEEEECC------CCcccceeeeccC-CCCCceEEECC
Confidence 9999999888866555 899999998 4444 444443 34556677765
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=8e-22 Score=158.44 Aligned_cols=232 Identities=12% Similarity=0.125 Sum_probs=153.0
Q ss_pred ceEEEEECCCCCEEEEecC---CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCPTEPYVLSGGK---DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
.+..++|+|+|+ |++++. ++.|++|++.++. .+.+..+
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~--------------------------------------~~~~~~~ 81 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT--------------------------------------AHKLNTV 81 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE--------------------------------------EEEEEEE
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCc--------------------------------------EEEeeee
Confidence 456899999999 554443 6899999996431 1122333
Q ss_pred ccccCCeEEEEEecCCCcEEEEEc-CCCeEEEEEcCC-CCcceEEEeec---------cCCceeEEEeccCCCCeEEEEc
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARV-GTSPVIKVEKA---------HDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~-~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
..+...+..++|+|++ ++|++++ .++.|.+|++.. +.......... ....+.+++|+| +++++++..
T Consensus 82 ~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~ 159 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDL 159 (347)
T ss_dssp EEESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEET
T ss_pred ecCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeC
Confidence 4466778899999999 5555555 789999999963 33222222221 122478899999 888777777
Q ss_pred CCCcEEEEecCCCCCCCCCCc--eeeecc-CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 157 ADNSVRMFDRRNLTSNGVGSP--INKFEG-HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
.++.|++||+... ++. +..+.. ....+..++|+|+|+++++++..++.|.+|++.......
T Consensus 160 ~~~~v~~~~~~~~-----g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~----------- 223 (347)
T 3hfq_A 160 GSDKVYVYNVSDA-----GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF----------- 223 (347)
T ss_dssp TTTEEEEEEECTT-----SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE-----------
T ss_pred CCCEEEEEEECCC-----CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce-----------
Confidence 7899999999831 322 222222 233678899999999888778889999999987511110
Q ss_pred ceeeeecCC------CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeee
Q 021657 234 GLFFQHAGH------RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 234 ~~~~~~~~~------~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
..+...... ...+..++|+|++.+++++...+ +.|.+|++.... ..+.+..+..+...+..++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-------~~v~v~~~~~~g---~~~~~~~~~~~~~~~~~~~~ 293 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-------NTLAVFAVTADG---HLTLIQQISTEGDFPRDFDL 293 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-------TEEEEEEECGGG---CEEEEEEEECSSSCCCEEEE
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-------CEEEEEEECCCC---cEEEeEEEecCCCCcCeEEE
Confidence 011111111 14588999999999888766555 899999997210 11334444445556777888
Q ss_pred CC
Q 021657 308 KP 309 (309)
Q Consensus 308 ~P 309 (309)
+|
T Consensus 294 sp 295 (347)
T 3hfq_A 294 DP 295 (347)
T ss_dssp CT
T ss_pred CC
Confidence 76
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=8.9e-22 Score=154.26 Aligned_cols=187 Identities=13% Similarity=0.148 Sum_probs=137.8
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-CCcceEEEeecc-CCceeEEEeccCCCCeEEEEc--CCCcE
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAH-DADLHCVDWNPLDDNLILTGS--ADNSV 161 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~--~dg~i 161 (309)
.+..|...|.+++|+|++ .+|++++ ++.|++||+.+ ++ .......+ ...+.+++|+| ++++|++++ .++..
T Consensus 36 ~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPS--PEKVDTGFATICNNDHGISP-DGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCS--CEECCCTTCCCBCSCCEECT-TSSEEEEEECTTTSSC
T ss_pred eeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCC--ceEeccccccccccceEECC-CCCEEEEEEeCCCCcc
Confidence 345578899999999999 6777775 78999999988 66 34444444 36789999999 999999988 34556
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
.+|.+... ......+..+ ..+..++|+|+++++++++..++.++||+++.... ....+..
T Consensus 111 ~l~~~~~~-----~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--------------~~~~~~~ 170 (297)
T 2ojh_A 111 AIYLLPST-----GGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--------------VETRLTH 170 (297)
T ss_dssp EEEEEETT-----CCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--------------CEEECCC
T ss_pred eEEEEECC-----CCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC--------------cceEccc
Confidence 66655431 2223444433 34889999999998776888899999999764221 1234456
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+...+.+++|+|++..+++++..| +.+++|++.. ....+..+..|...+..++|+|
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~-------~~~~i~~~~~-----~~~~~~~~~~~~~~~~~~~~s~ 226 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRT-------GQMQIWRVRV-----DGSSVERITDSAYGDWFPHPSP 226 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTT-------SSCEEEEEET-----TSSCEEECCCCSEEEEEEEECT
T ss_pred CCCccccceECCCCCEEEEEecCC-------CCccEEEECC-----CCCCcEEEecCCcccCCeEECC
Confidence 777899999999999888765545 8999999873 2344566777888899999987
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=1.5e-22 Score=173.82 Aligned_cols=236 Identities=9% Similarity=0.027 Sum_probs=154.5
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecC-CCcEEEEeCCccccccccCC----ccccccCCCCceeecCCC-CCCCCccc--
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGK-DKSVVLWSIQDHITSSATDP----ATAKSAGSSGSIIKQSPK-PGDGNDKA-- 75 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~-dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 75 (309)
++.+...+|++++|+|||++||+++. ||+++||+++++........ ......... ........ .......+
T Consensus 16 ~~~~~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 16 VERLIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHHHHHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred HHHHhccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 33343447999999999999998887 99999999866533222211 111122222 22222221 12222333
Q ss_pred CCCC-CcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEE
Q 021657 76 ADGP-SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 76 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
++.. ..... .+.... .+...+|+|+++..+++.+.++.+.+||+.+++ ..... .+.. .+++|+| +|+++++
T Consensus 95 ~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~--~~~l~-~~~~--~~~~~sp-DG~~la~ 166 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGG--LRELA-RLPG--FGFVSDI-RGDLIAG 166 (582)
T ss_dssp EETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTE--EEEEE-EESS--CEEEEEE-ETTEEEE
T ss_pred EeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCc--EEEee-cCCC--ceEEECC-CCCEEEE
Confidence 3330 11111 222222 244668888885555554555556699998776 33333 2333 8999999 9999998
Q ss_pred EcCC----CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCC
Q 021657 155 GSAD----NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 155 ~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~ 228 (309)
++.+ +.|++||+.+ ++. ..+..+...+..++|+|||+.| +++..++ .|++||+..
T Consensus 167 ~~~~~~~~~~i~~~d~~~------g~~-~~l~~~~~~~~~~~~SpDG~~l-~~~~~~~~~~i~~~d~~~----------- 227 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSS------GGL-RVFDSGEGSFSSASISPGMKVT-AGLETAREARLVTVDPRD----------- 227 (582)
T ss_dssp EEEEETTEEEEEEEETTT------CCC-EEECCSSCEEEEEEECTTSCEE-EEEECSSCEEEEEECTTT-----------
T ss_pred EEEcCCCCeEEEEEcCCC------CCc-eEeecCCCccccceECCCCCEE-EEccCCCeeEEEEEcCCC-----------
Confidence 8777 7899999987 554 4667788889999999999975 5777888 899999986
Q ss_pred cCCCCceeeeecCCCcceeeEE--------EccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 229 TNYPAGLFFQHAGHRDKVVDFH--------WNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
.... .+.+|...+..++ |+|++ .++++++.| +.+++|++
T Consensus 228 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~-------g~~~l~~~ 274 (582)
T 3o4h_A 228 ----GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE-------GRSAVFID 274 (582)
T ss_dssp ----CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET-------TEEEEEET
T ss_pred ----CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC-------CcEEEEEE
Confidence 1222 4456666677777 99999 778777666 99999998
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=6.4e-23 Score=180.43 Aligned_cols=207 Identities=12% Similarity=0.160 Sum_probs=140.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+.+++|+|||+++++ +.||+|++||+.++.. ...+..|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~----------------------------------------~~~~~~~ 56 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS----------------------------------------TVLIEGK 56 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC----------------------------------------EEEECTT
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcE----------------------------------------EEEeccc
Confidence 4578999999997766 7899999999985422 2223333
Q ss_pred cC---CeEEEEEecCCCcEEEEEcCC---------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 91 ED---TVEDVTFCPSSAQEFCSVGDD---------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 91 ~~---~v~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.. .|.+++|+|+| ++|++++.+ +.|.+||+.+++.........|...+..++|+| +++.|+.++.
T Consensus 57 ~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~- 133 (723)
T 1xfd_A 57 KIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE- 133 (723)
T ss_dssp TTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCS-STTCEEEEET-
T ss_pred cccccccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECC-CCCEEEEEEC-
Confidence 33 48999999999 777777664 788999998887321222223445589999999 9999998875
Q ss_pred CcEEEEecCCCCCCCCCCceeeeccCCCC------------------eeEEEEecCCCcEEEEecCCC------------
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFEGHSAA------------------VLCVQWSPDKSSVFGSSAEDG------------ 208 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~l~~~~~~dg------------ 208 (309)
+.|++||+.+ ++.......+... +.+++|+|||++|+ .++.|+
T Consensus 134 ~~i~~~~~~~------g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la-~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 134 NNIYYCAHVG------KQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA-YAAINDSRVPIMELPTYT 206 (723)
T ss_dssp TEEEEESSSS------SCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE-EEEEECTTSCEEEECCCS
T ss_pred CeEEEEECCC------CceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE-EEEECCCccceEEeeccC
Confidence 7999999987 5555544433332 37899999999754 554332
Q ss_pred ----------------------cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCC
Q 021657 209 ----------------------LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDC 266 (309)
Q Consensus 209 ----------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~ 266 (309)
.|++||+.......... .-.....+...+..++|+|++..++....
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~---------~~~~~~~~~~~~~~~~~SpDg~~l~~~~~--- 274 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM---------PPDDPRMREYYITMVKWATSTKVAVTWLN--- 274 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC---------CCCCGGGSSEEEEEEEESSSSEEEEEEEE---
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee---------CCccCCCccceeEEEEEeCCCeEEEEEEc---
Confidence 67788876522111000 00011224678899999999876544332
Q ss_pred CCCCCCCeEEEEEcc
Q 021657 267 DSTGGGGTLQIWRMS 281 (309)
Q Consensus 267 ~s~~~dg~v~vw~~~ 281 (309)
.+..+..|++||+.
T Consensus 275 -~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 275 -RAQNVSILTLCDAT 288 (723)
T ss_dssp -TTSCEEEEEEEETT
T ss_pred -CCCCeEEEEEEeCC
Confidence 23455789999998
No 142
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=5.9e-21 Score=154.26 Aligned_cols=265 Identities=11% Similarity=0.047 Sum_probs=164.7
Q ss_pred ceEEEEECCCCCEEEEecCC----CcEEEEeCCcc--ccc--ccc--CCccc--cccCCCCceeecCCCCCCCCcccCCC
Q 021657 11 AEFALAMCPTEPYVLSGGKD----KSVVLWSIQDH--ITS--SAT--DPATA--KSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~d----g~i~vwd~~~~--~~~--~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
.+..++|+|+|++|++++.+ +.|.+|++... ... ... ..... ... ...... .....++.+.+|+.
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~-~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIV-TANYSGGSITVFPI 127 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEE-EEETTTTEEEEEEB
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEE-EEECCCCEEEEEEe
Confidence 45678999999999988876 89999998752 111 000 00000 111 111111 12223456666665
Q ss_pred CCcCccccc--------------ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc----c-e------EEEee
Q 021657 79 PSVGPRGIY--------------NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS----P-V------IKVEK 133 (309)
Q Consensus 79 ~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~-~------~~~~~ 133 (309)
.....+..+ ..+...+.+++|+|+|..+++++..++.|.+|++..... . . .....
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 543322211 112334688999999955666666789999999875542 1 1 12223
Q ss_pred ccCCceeEEEeccCCCCeEEEEc-CCCcEEEEecCCCCCCCCCCc--eeeec---cCCCCeeEEEEecCCCcEEEEecC-
Q 021657 134 AHDADLHCVDWNPLDDNLILTGS-ADNSVRMFDRRNLTSNGVGSP--INKFE---GHSAAVLCVQWSPDKSSVFGSSAE- 206 (309)
Q Consensus 134 ~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~- 206 (309)
.....+..++|+| +++++++++ .++.|.+||+.+ +.. +..+. .+......++|+|||++|+++...
T Consensus 208 ~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~------g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 208 APGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYAD------GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp CTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEET------TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred CCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecC------CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC
Confidence 3455678999999 898776666 689999999986 432 33332 233456899999999987766666
Q ss_pred CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 207 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
++.|.+|++...... ...+..... ...+..++|+|++.+++++...+ +.|.+|++...
T Consensus 281 ~~~i~v~~~~~~~g~-----------~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~-------~~v~v~~~d~~--- 338 (361)
T 3scy_A 281 ADGVAIFKVDETNGT-----------LTKVGYQLT-GIHPRNFIITPNGKYLLVACRDT-------NVIQIFERDQA--- 338 (361)
T ss_dssp SCEEEEEEECTTTCC-----------EEEEEEEEC-SSCCCEEEECTTSCEEEEEETTT-------TEEEEEEECTT---
T ss_pred CCEEEEEEEcCCCCc-----------EEEeeEecC-CCCCceEEECCCCCEEEEEECCC-------CCEEEEEEECC---
Confidence 689999999731111 112333333 45678999999999888766555 89999877621
Q ss_pred ChhhHhHhh-hcccceEEEeeeC
Q 021657 287 PQDEVLAEL-EKFKAHVISCTSK 308 (309)
Q Consensus 287 ~~~~~~~~~-~~h~~~v~~~~~~ 308 (309)
+++..... ..+...+.|+.|.
T Consensus 339 -~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 339 -TGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp -TCCEEECSCCEECSSEEEEEEE
T ss_pred -CCcEeecceeeeCCCCeEEEEc
Confidence 23332222 2244578888885
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=2.9e-21 Score=163.41 Aligned_cols=203 Identities=11% Similarity=0.146 Sum_probs=155.4
Q ss_pred EECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeE
Q 021657 16 AMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVE 95 (309)
Q Consensus 16 ~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 95 (309)
+|+|++.++++++.|++|.+||..++ +.+..+..+.. +.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~----------------------------------------~~~~~i~~g~~-~~ 182 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSK----------------------------------------KIVKVIDTGYA-VH 182 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTC----------------------------------------CEEEEEECSTT-EE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCc----------------------------------------eEEEEEecCcc-cc
Confidence 48899999999999999999998743 33344442222 88
Q ss_pred EEEEecCCCcEEEEEcCCCeEEEEEc--CCCCcceEEEeeccCCceeEEEeccC---CCCeEEEEc-CCCcEEEEecCCC
Q 021657 96 DVTFCPSSAQEFCSVGDDSCLILWDA--RVGTSPVIKVEKAHDADLHCVDWNPL---DDNLILTGS-ADNSVRMFDRRNL 169 (309)
Q Consensus 96 ~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~-~dg~i~i~d~~~~ 169 (309)
.++|+|++ ++|++++.|+.|.+||+ .+++ ....+. +...+..++|+|. +++++++++ .+++|.+||..+
T Consensus 183 ~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~--~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t- 257 (543)
T 1nir_A 183 ISRMSASG-RYLLVIGRDARIDMIDLWAKEPT--KVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET- 257 (543)
T ss_dssp EEEECTTS-CEEEEEETTSEEEEEETTSSSCE--EEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-
T ss_pred eEEECCCC-CEEEEECCCCeEEEEECcCCCCc--EEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-
Confidence 99999999 78899999999999999 6655 555555 4556899999982 467777776 589999999998
Q ss_pred CCCCCCCceeeeccC-----------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 170 TSNGVGSPINKFEGH-----------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
++++..+..+ ...+..+.++|++..++++...++.|.+||+...... .+..
T Consensus 258 -----~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l-------------~~~~ 319 (543)
T 1nir_A 258 -----LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL-------------TVTS 319 (543)
T ss_dssp -----CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC-------------EEEE
T ss_pred -----cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc-------------eeEE
Confidence 7888777542 2368899999999888889999999999999862211 1112
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
. .+...+.++.|+|++.++++++..+ ++|.+||+. +++++..+.
T Consensus 320 i-~~~~~~~~~~~spdg~~l~va~~~~-------~~v~v~D~~------tg~l~~~i~ 363 (543)
T 1nir_A 320 I-GAAPFLHDGGWDSSHRYFMTAANNS-------NKVAVIDSK------DRRLSALVD 363 (543)
T ss_dssp E-ECCSSCCCEEECTTSCEEEEEEGGG-------TEEEEEETT------TTEEEEEEE
T ss_pred e-ccCcCccCceECCCCCEEEEEecCC-------CeEEEEECC------CCeEEEeec
Confidence 2 3556788999999999988877665 899999998 555555544
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=1.4e-20 Score=151.26 Aligned_cols=222 Identities=13% Similarity=0.157 Sum_probs=148.0
Q ss_pred CCCCcceEEEEECCCCCEEEEec-CCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGG-KDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
.|.. .+..++|+|+|++|++++ .++.|++|++...-....... ... ....+.
T Consensus 83 ~~~~-~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~--------------~~~------------~~~~p~ 135 (347)
T 3hfq_A 83 APGT-PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDT--------------VQH------------SGHGPR 135 (347)
T ss_dssp EESC-CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEE--------------EEC------------CCCCSS
T ss_pred cCCC-CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecce--------------eec------------CCCCCC
Confidence 3455 567999999999888777 789999999863100000000 000 000000
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcC-CCCcceEEEeec-cCCceeEEEeccCCCCeEEE-EcCCCcE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR-VGTSPVIKVEKA-HDADLHCVDWNPLDDNLILT-GSADNSV 161 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~-~~~dg~i 161 (309)
...+...+.+++|+|++. ++++...++.|.+|++. .++......... ....+..++|+| +++++++ ...++.|
T Consensus 136 --~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v 211 (347)
T 3hfq_A 136 --PEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSSQI 211 (347)
T ss_dssp --TTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEE
T ss_pred --ccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCCEE
Confidence 112344688999999995 78888889999999998 444212222222 233678899999 8885554 5678999
Q ss_pred EEEecCCCCCCCCCC--ceeeeccCC------CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCC
Q 021657 162 RMFDRRNLTSNGVGS--PINKFEGHS------AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA 233 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~--~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (309)
.+|++.... ++ .+..+.... ..+..++|+|+|++++++...++.|.+|++...+. .
T Consensus 212 ~v~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~------------~ 275 (347)
T 3hfq_A 212 ASLKYDTQT----GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH------------L 275 (347)
T ss_dssp EEEEEETTT----TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC------------E
T ss_pred EEEEecCCC----CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc------------E
Confidence 999987421 22 223333222 34888999999998877888899999999975221 2
Q ss_pred ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 234 GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 234 ~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+..+..+...+..++|+|++.+++++...+ +.|.+|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-------~~v~v~~~d 316 (347)
T 3hfq_A 276 TLIQQISTEGDFPRDFDLDPTEAFVVVVNQNT-------DNATLYARD 316 (347)
T ss_dssp EEEEEEECSSSCCCEEEECTTSSEEEEEETTT-------TEEEEEEEC
T ss_pred EEeEEEecCCCCcCeEEECCCCCEEEEEEcCC-------CcEEEEEEe
Confidence 23445555666789999999999888766554 899999775
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=2.2e-21 Score=170.27 Aligned_cols=258 Identities=12% Similarity=0.165 Sum_probs=169.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC---CccccccCCCCceeecCCCCCCCCcccCCCCC-----cC
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD---PATAKSAGSSGSIIKQSPKPGDGNDKAADGPS-----VG 82 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 82 (309)
.|.+++|+|| ++++.+ .|+.|++||+.++....... ...............+. .++.+.+|+..+ .+
T Consensus 83 ~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~---~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV---RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE---ETTEEEEEECBCTTSCCCC
T ss_pred CceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE---ECCeEEEEecCcccccCCC
Confidence 5899999999 665555 35999999998764322111 11112222222222222 346788888877 66
Q ss_pred cccccccccCC--------------eEEEEEecCCCcEEEEEc---------------------------------CCCe
Q 021657 83 PRGIYNGHEDT--------------VEDVTFCPSSAQEFCSVG---------------------------------DDSC 115 (309)
Q Consensus 83 ~~~~~~~~~~~--------------v~~~~~~~~~~~~l~s~~---------------------------------~dg~ 115 (309)
.......+... +.++.|+|+| +.|++++ .+..
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 55544444333 4889999999 6777776 4578
Q ss_pred EEEEEcCCCCcceEEEe--eccCCceeEEEeccCCCCeEEEEcCCC-----cEEEEecCCCCCCCCCCceeeec--cCCC
Q 021657 116 LILWDARVGTSPVIKVE--KAHDADLHCVDWNPLDDNLILTGSADN-----SVRMFDRRNLTSNGVGSPINKFE--GHSA 186 (309)
Q Consensus 116 i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~--~~~~ 186 (309)
|.+||+.+++ ..... ..+...+.+++|+| +++.|++++.++ .|++||+.+ ++....+. .+..
T Consensus 237 l~~~d~~~~~--~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~------g~~~~~~~~~~~~~ 307 (706)
T 2z3z_A 237 VGIYHLATGK--TVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAET------GRFVRTLFVETDKH 307 (706)
T ss_dssp EEEEETTTTE--EEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTT------CCEEEEEEEEECSS
T ss_pred EEEEECCCCc--eEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCC------CceeeEEEEccCCC
Confidence 9999998776 22222 24667899999999 999999887775 899999988 53333332 1222
Q ss_pred ---CeeEEEEec--CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee-EEEccCCCeEEE
Q 021657 187 ---AVLCVQWSP--DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD-FHWNASDPWTVV 260 (309)
Q Consensus 187 ---~v~~~~~~~--~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~ 260 (309)
.+..++|+| +|++ ++++..|+.++||+++..+ ..+..+..+...+.. ++|+|++..+++
T Consensus 308 ~~~~~~~~~~sp~~dg~~-l~~~~~~g~~~l~~~~~~~--------------~~~~~l~~~~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQF-IWQSRRDGWNHLYLYDTTG--------------RLIRQVTKGEWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp CCCCCSCCEECTTCSSEE-EEEECTTSSCEEEEEETTS--------------CEEEECCCSSSCEEEEEEECTTSSEEEE
T ss_pred eECccCCceeecCCCCEE-EEEEccCCccEEEEEECCC--------------CEEEecCCCCeEEEeeeEEcCCCCEEEE
Confidence 246789999 9984 6688889999999887322 223445566667776 799999998887
Q ss_pred EecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 261 SVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 261 s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+++.+ +.....|..||+. +++ +..+. |...+.+++|+|
T Consensus 373 ~~~~~---~~~~~~l~~~d~~------~~~-~~~l~-~~~~~~~~~~sp 410 (706)
T 2z3z_A 373 ESTEA---SPLERHFYCIDIK------GGK-TKDLT-PESGMHRTQLSP 410 (706)
T ss_dssp EESSS---CTTCBEEEEEETT------CCC-CEESC-CSSSEEEEEECT
T ss_pred EecCC---CCceEEEEEEEcC------CCC-ceecc-CCCceEEEEECC
Confidence 76654 1111266666665 222 23333 566788888887
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=2e-21 Score=171.42 Aligned_cols=244 Identities=12% Similarity=0.054 Sum_probs=162.7
Q ss_pred cccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 2 EILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 2 ~~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
+.+..|.. .+..++|+|||++|+.++ ++.|++||+.++......... ..... .+
T Consensus 145 ~~l~~~~~-~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~-------~~~~~-----------------~g 198 (741)
T 2ecf_A 145 RQLTHGEG-FATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG-------STTIG-----------------NG 198 (741)
T ss_dssp CBCCCSSS-CEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC-------CSSEE-----------------ES
T ss_pred EEcccCCc-ccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC-------cccee-----------------cc
Confidence 35667777 789999999999999887 569999999864322111100 00000 00
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCC---------------------------------eEEEEEcCC-CCcc
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS---------------------------------CLILWDARV-GTSP 127 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---------------------------------~i~iwd~~~-~~~~ 127 (309)
............+..+.|+|+| +.|++++.|+ .|.+||+.+ ++
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-- 275 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-- 275 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC--
T ss_pred ccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc--
Confidence 0000001112346789999999 6677776655 789999987 76
Q ss_pred eEEEee--ccCCceeEEEeccCCCCeEEEEcC-----CCcEEEEecCCCCCCCCCCceeeeccCCC----CeeEEEEecC
Q 021657 128 VIKVEK--AHDADLHCVDWNPLDDNLILTGSA-----DNSVRMFDRRNLTSNGVGSPINKFEGHSA----AVLCVQWSPD 196 (309)
Q Consensus 128 ~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~ 196 (309)
...... .|...+..++| | +++.|++++. +..|++||+.+ ++....+..+.. .+..++|+||
T Consensus 276 ~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~------g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 276 TQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLAS------NQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp CEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTT------CCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred eEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCC------CceEEEEEcCCCCcCCcCCceEECCC
Confidence 233222 46778999999 9 9998887654 56899999998 666655554432 4568999999
Q ss_pred CCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE-EEccCCCeEEEEecCCCCCCCCCCeE
Q 021657 197 KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF-HWNASDPWTVVSVSDDCDSTGGGGTL 275 (309)
Q Consensus 197 ~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~s~s~d~~s~~~dg~v 275 (309)
|+ ++++++.||.++||.++..+ . ...+..|...+..+ .|+|++..++++++.| ....+
T Consensus 348 g~-~~~~~~~~g~~~l~~~~~~~--------------~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~-----~~~~~ 406 (741)
T 2ecf_A 348 GS-ILWSSERTGFQHLYRIDSKG--------------K-AAALTHGNWSVDELLAVDEKAGLAYFRAGIE-----SARES 406 (741)
T ss_dssp SC-EEEEECTTSSCEEEEECSSS--------------C-EEESCCSSSCEEEEEEEETTTTEEEEEECSS-----CTTCB
T ss_pred Ce-EEEEecCCCccEEEEEcCCC--------------C-eeeeeecceEEEeEeEEeCCCCEEEEEEeCC-----CCceE
Confidence 99 67788889988888876421 1 33455667778887 5999999888766654 11289
Q ss_pred EEEEccccccCChhhHhHhhhcccceEEEeeeCC
Q 021657 276 QIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 276 ~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
+||++.. .+..+..+.. ...+..++|+|
T Consensus 407 ~l~~~~~-----~g~~~~~l~~-~~~~~~~~~sp 434 (741)
T 2ecf_A 407 QIYAVPL-----QGGQPQRLSK-APGMHSASFAR 434 (741)
T ss_dssp EEEEEET-----TCCCCEECCC-SCSEEEEEECT
T ss_pred EEEEEEc-----CCCCeeeccc-CCCceEEEECC
Confidence 9999872 2333444544 55677888876
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=4.2e-21 Score=168.90 Aligned_cols=273 Identities=12% Similarity=0.047 Sum_probs=167.0
Q ss_pred ccCCCCCc--ceEEEEECCCCCEEEEecCC---------CcEEEEeCCcccccc-ccCC-----ccccccCCCCceeecC
Q 021657 3 ILTGHQDN--AEFALAMCPTEPYVLSGGKD---------KSVVLWSIQDHITSS-ATDP-----ATAKSAGSSGSIIKQS 65 (309)
Q Consensus 3 ~l~~H~~~--~V~~~~~~~~~~~l~t~~~d---------g~i~vwd~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~ 65 (309)
.+.+|... .|.+++|||||++|++++.+ +.|.+||++++.... .... ......+..+....+.
T Consensus 52 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~ 131 (723)
T 1xfd_A 52 LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFI 131 (723)
T ss_dssp EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEE
T ss_pred EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEE
Confidence 34455431 38899999999999998764 788899998875311 1111 1112222222222221
Q ss_pred CCCCCCCcccCCCCCcCcccccccccCCe------------------EEEEEecCCCcEEEEEcCCC-------------
Q 021657 66 PKPGDGNDKAADGPSVGPRGIYNGHEDTV------------------EDVTFCPSSAQEFCSVGDDS------------- 114 (309)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~l~s~~~dg------------- 114 (309)
. ...+++|+..+.+.......+...+ .++.|+|+| +.|++++.|+
T Consensus 132 ~---~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 132 F---ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp E---TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSS
T ss_pred E---CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCC
Confidence 1 1578888888777665555444333 789999999 6677766442
Q ss_pred ---------------------eEEEEEcCCCCcceEEEeecc------CCceeEEEeccCCCCeEEEEcC----CCcEEE
Q 021657 115 ---------------------CLILWDARVGTSPVIKVEKAH------DADLHCVDWNPLDDNLILTGSA----DNSVRM 163 (309)
Q Consensus 115 ---------------------~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~----dg~i~i 163 (309)
.|++||+.+++ ....+..+ ...+..++|+| +++++++... +..|++
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPT--HDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTL 284 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSC--CCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEE
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCc--eeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEE
Confidence 79999998776 22333333 56789999999 8988876643 357999
Q ss_pred EecCCCCCCCCCCceeeecc-CCCCe----eEEEEecCCCcEEEE-ecCCC------cEEEEeCCcccccccCCCCCcCC
Q 021657 164 FDRRNLTSNGVGSPINKFEG-HSAAV----LCVQWSPDKSSVFGS-SAEDG------LLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~-~~~~v----~~~~~~~~~~~l~~~-~~~dg------~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
||+.+ ++....+.. +...+ ..++|+|||+.++.. +..++ .|.+||+...+..
T Consensus 285 ~d~~~------g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~---------- 348 (723)
T 1xfd_A 285 CDATT------GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN---------- 348 (723)
T ss_dssp EETTT------CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS----------
T ss_pred EeCCC------CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc----------
Confidence 99988 665554433 23333 378999999986654 55677 4666663221210
Q ss_pred CCceeeeecCCCcceee-EEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc---ccceEEEeee
Q 021657 232 PAGLFFQHAGHRDKVVD-FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK---FKAHVISCTS 307 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~ 307 (309)
.....+..+...+.. ++|+|++..++.++..+ ..+.+++|++... .......+.. |...+..++|
T Consensus 349 --~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~~~~~l~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~ 417 (723)
T 1xfd_A 349 --DNIQSITSGDWDVTKILAYDEKGNKIYFLSTED-----LPRRRQLYSANTV----GNFNRQCLSCDLVENCTYFSASF 417 (723)
T ss_dssp --CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSS-----CTTCCEEEEECSS----TTCCCBCSSTTSSSSCCCCEEEE
T ss_pred --cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCC-----CCcceEEEEEeCC----CCCCcceecccccCCCCeEEEEE
Confidence 001122222333444 69999999887654432 1268999998731 1112223332 5666778888
Q ss_pred CC
Q 021657 308 KP 309 (309)
Q Consensus 308 ~P 309 (309)
+|
T Consensus 418 sp 419 (723)
T 1xfd_A 418 SH 419 (723)
T ss_dssp CT
T ss_pred CC
Confidence 76
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=3.7e-20 Score=148.29 Aligned_cols=209 Identities=11% Similarity=0.217 Sum_probs=139.3
Q ss_pred ceEEEEECCCCCEEEEec-CCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPTEPYVLSGG-KDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
.+..++|+|++++|++++ .++.|++||+..+. ..+....+..
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-------------------------------------~~~~~~~~~~ 127 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-------------------------------------PVGVVDVVEG 127 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-------------------------------------EEEEEEEECC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-------------------------------------cccccccccC
Confidence 467899999999876655 58899999984210 0111122222
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-CCcceEE--Eee-ccCCceeEEEeccCCCCeEE-EEcCCCcEEEE
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIK--VEK-AHDADLHCVDWNPLDDNLIL-TGSADNSVRMF 164 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~i~ 164 (309)
...+.+++|+|++..+++++..++.|.+||+.+ ++..... ... .....+..++|+| ++++++ ++..++.|.+|
T Consensus 128 -~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~ 205 (343)
T 1ri6_A 128 -LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVW 205 (343)
T ss_dssp -CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEE
T ss_pred -CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEE
Confidence 234788999999944444444899999999987 5421111 222 2345788999999 888665 45578999999
Q ss_pred ecCCCCCCCCCCc--eeeec---cC---CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 165 DRRNLTSNGVGSP--INKFE---GH---SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 165 d~~~~~~~~~~~~--~~~~~---~~---~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|+.... ++. ...+. .. ...+..++|+|+++++++++..++.|.+||+...... ...+
T Consensus 206 ~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~-----------~~~~ 270 (343)
T 1ri6_A 206 ELKDPH----GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV-----------LSKE 270 (343)
T ss_dssp ESSCTT----SCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC-----------EEEE
T ss_pred EecCCC----CcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCc-----------eEEe
Confidence 996421 221 22222 11 2356789999999988778878999999999841111 1223
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+..+.. +..++|+|++.+++++...+ +.|.+|++.
T Consensus 271 ~~~~~~~~-~~~~~~s~dg~~l~~~~~~~-------~~v~v~~~d 307 (343)
T 1ri6_A 271 GFQPTETQ-PRGFNVDHSGKYLIAAGQKS-------HHISVYEIV 307 (343)
T ss_dssp EEEECSSS-CCCEEECTTSSEEEEECTTT-------CEEEEEEEE
T ss_pred eeecCCCc-cceEEECCCCCEEEEecCCC-------CeEEEEEEc
Confidence 33344444 88999999999888755444 999999775
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=5.3e-21 Score=174.35 Aligned_cols=264 Identities=9% Similarity=-0.003 Sum_probs=180.6
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcc--cc-ccccCC-ccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--IT-SSATDP-ATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~--~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
.+.+|.+ .+.++.|+++ .++++++.|+.++||.+... .. ...... ..............+. .++.+.+|+.
T Consensus 198 ~l~~~~~-~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~---~~~~i~~~d~ 272 (1045)
T 1k32_A 198 KIVDMST-HVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFS---KGGSIYIFNP 272 (1045)
T ss_dssp EEECCSS-CCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEE---ETTEEEEECT
T ss_pred ECcCCCC-cccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEE---eCCEEEEecC
Confidence 4567888 8899999988 67778888999999987531 11 111110 0011111111111111 2556777776
Q ss_pred CCcCccccccc-----------ccCCeEEEEEe-cCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCC-ceeEEEec
Q 021657 79 PSVGPRGIYNG-----------HEDTVEDVTFC-PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA-DLHCVDWN 145 (309)
Q Consensus 79 ~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~ 145 (309)
.. ..+..+.. |...+.+++|+ |+| ..|++++ ++.|.+|++..++ ...+..|.. .+..++|+
T Consensus 273 ~~-~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~s 346 (1045)
T 1k32_A 273 DT-EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTY---VLKVPEPLRIRYVRRGGD 346 (1045)
T ss_dssp TT-CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSB---EEECSCCSCEEEEEECSS
T ss_pred Cc-eEeeeeccCcccccccccccccccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCc---eEEccCCCcceEEeeeEc
Confidence 32 22223333 44578999999 998 6677776 7899999987665 334556777 89999999
Q ss_pred cCCCCeEEEEcCCCcEE-EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccC
Q 021657 146 PLDDNLILTGSADNSVR-MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~ 224 (309)
+++.++.++.++.+. +||+.. ++. ..+..+...+..++|+|||++ +++++.++.|++||+..
T Consensus 347 --dg~~l~~~s~~~~l~~~~d~~~------~~~-~~l~~~~~~~~~~~~SpDG~~-la~~~~~~~v~~~d~~t------- 409 (1045)
T 1k32_A 347 --TKVAFIHGTREGDFLGIYDYRT------GKA-EKFEENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLET------- 409 (1045)
T ss_dssp --SEEEEEEEETTEEEEEEEETTT------CCE-EECCCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTT-------
T ss_pred --CCCeEEEEECCCceEEEEECCC------CCc-eEecCCccceeeeEECCCCCE-EEEECCCCeEEEEECCC-------
Confidence 678888888788888 889876 443 344467788999999999996 56888899999999986
Q ss_pred CCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCC--CCCCCCCCeEEEEEccccccCChhhHhHhhhcccceE
Q 021657 225 GPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDD--CDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHV 302 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d--~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v 302 (309)
........+|...+..++|+|++.+++.++..+ ...+..++.|++||+. +++ +..+..|...+
T Consensus 410 --------g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~------~g~-~~~l~~~~~~~ 474 (1045)
T 1k32_A 410 --------GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME------GRK-IFAATTENSHD 474 (1045)
T ss_dssp --------CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT------TTE-EEECSCSSSBE
T ss_pred --------CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC------CCc-EEEeeCCCccc
Confidence 223334457888999999999998776544310 0012334699999998 444 56677788888
Q ss_pred EEeeeCC
Q 021657 303 ISCTSKP 309 (309)
Q Consensus 303 ~~~~~~P 309 (309)
..++|+|
T Consensus 475 ~~~~~sp 481 (1045)
T 1k32_A 475 YAPAFDA 481 (1045)
T ss_dssp EEEEECT
T ss_pred CCceEcC
Confidence 8899987
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=4.8e-20 Score=148.30 Aligned_cols=225 Identities=12% Similarity=0.128 Sum_probs=159.8
Q ss_pred eEEEEECCCCCEE-EEecCCCcEEEEeCCccccccccCCc-------------cccccCCCCceeecCCCCCCCCcccCC
Q 021657 12 EFALAMCPTEPYV-LSGGKDKSVVLWSIQDHITSSATDPA-------------TAKSAGSSGSIIKQSPKPGDGNDKAAD 77 (309)
Q Consensus 12 V~~~~~~~~~~~l-~t~~~dg~i~vwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (309)
+..++|+|+|+++ ++...++.|.+||.+++......... .............+.....++.+.+|+
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 5688999999955 55666899999999877433222111 001111122222222223356788899
Q ss_pred CCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec----cCCceeEEEeccCCCCeEE
Q 021657 78 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA----HDADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~ 153 (309)
..+.+....+..+...+.+++|+|++ ..+++++.++.|.+||+.+++ ....+.. +...+..++|+| +++.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~ 246 (353)
T 3vgz_A 171 GGNIKLKTAIQNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNK--ILSRKKLLDDGKEHFFINISLDT-ARQRAF 246 (353)
T ss_dssp TTTTEEEEEECCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTE--EEEEEECCCSSSCCCEEEEEEET-TTTEEE
T ss_pred CCCCceEEEecCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCe--EEEEEEcCCCCCCcccceEEECC-CCCEEE
Confidence 88888877777566678899999999 678888889999999998877 4444332 455678899999 888666
Q ss_pred EEcC-CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCC
Q 021657 154 TGSA-DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYP 232 (309)
Q Consensus 154 ~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 232 (309)
+++. ++.|.+||+.+ ++.+..+.... ...++|+|++++++++...++.|.+||+.+
T Consensus 247 ~~~~~~~~v~~~d~~~------~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~--------------- 303 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRN------GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS--------------- 303 (353)
T ss_dssp EEESSSSEEEEEETTT------CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT---------------
T ss_pred EEeCCCCEEEEEECCC------CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC---------------
Confidence 5554 59999999988 77777776433 257999999998887887899999999987
Q ss_pred CceeeeecCCCcceeeEEEccCCCeEEEEecC
Q 021657 233 AGLFFQHAGHRDKVVDFHWNASDPWTVVSVSD 264 (309)
Q Consensus 233 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~ 264 (309)
.+.+..+.. ...+.+++|+|++.+++++...
T Consensus 304 ~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 304 YKVVKTFDT-PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TEEEEEEEC-CSEEEEEEECTTSCEEEEEEEC
T ss_pred CeEEEEEec-CCCCCeEEEcCCCCEEEEEEcc
Confidence 222333332 3467999999999988877654
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.1e-20 Score=151.83 Aligned_cols=237 Identities=8% Similarity=0.052 Sum_probs=154.3
Q ss_pred EEEECCCCCEEEEecCCCcEEEEeCCccccccccCC-----ccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 14 ALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-----ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
.+++++++.++++++.+++|++||+.++........ ..............+ .....+.+.+|+..+.+.+..+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v-~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYV-LNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEE-EETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEE-EeCCCCcEEEEeCCCCcEEEEEE
Confidence 567888999999999999999999987743322211 111112222221111 12345678888888777665554
Q ss_pred cc------cCCeEEEEEecCCCcEEEEEcCC------------CeEEEEEcCCCCcc-eEEEeeccCCceeEEEeccCCC
Q 021657 89 GH------EDTVEDVTFCPSSAQEFCSVGDD------------SCLILWDARVGTSP-VIKVEKAHDADLHCVDWNPLDD 149 (309)
Q Consensus 89 ~~------~~~v~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~ 149 (309)
.. ...+..++|+|+| +++++++.+ +.|.+||+.+++.. ..... .+...+.+++|+| ++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~-dg 159 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAAD-DG 159 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECT-TS
T ss_pred cccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECC-CC
Confidence 32 2337889999999 667776654 89999999874421 12223 2344688999999 88
Q ss_pred CeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCC--------------------------------------------
Q 021657 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS-------------------------------------------- 185 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 185 (309)
+ +++++ +.|.+||+.+ ++.+..+....
T Consensus 160 ~-l~~~~--~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 230 (349)
T 1jmx_B 160 S-LYVAG--PDIYKMDVKT------GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 230 (349)
T ss_dssp C-EEEES--SSEEEECTTT------CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred c-EEEcc--CcEEEEeCCC------CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc
Confidence 8 55554 3499999987 54444433211
Q ss_pred ------------------------CCeeEEEEec-CCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 186 ------------------------AAVLCVQWSP-DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 186 ------------------------~~v~~~~~~~-~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
..+..++|+| ++++++ ++ ++.|.+||+.+ .+.+..+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~-~~--~~~v~~~d~~~---------------~~~~~~~~ 292 (349)
T 1jmx_B 231 LLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIY-GV--LNRLAKYDLKQ---------------RKLIKAAN 292 (349)
T ss_dssp EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEE-EE--ESEEEEEETTT---------------TEEEEEEE
T ss_pred cceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEE-EE--cCeEEEEECcc---------------CeEEEEEc
Confidence 1345677889 999755 55 88999999987 22222222
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
....+.+++|+|++.++++ ++.+ +.|++||+. +.+.+..++
T Consensus 293 -~~~~~~~~~~s~dg~~l~~-~~~~-------~~v~v~d~~------~~~~~~~~~ 333 (349)
T 1jmx_B 293 -LDHTYYCVAFDKKGDKLYL-GGTF-------NDLAVFNPD------TLEKVKNIK 333 (349)
T ss_dssp -CSSCCCEEEECSSSSCEEE-ESBS-------SEEEEEETT------TTEEEEEEE
T ss_pred -CCCCccceEECCCCCEEEE-ecCC-------CeEEEEecc------ccceeeeee
Confidence 2335679999999988775 3333 899999998 555555544
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=6.1e-20 Score=161.09 Aligned_cols=249 Identities=11% Similarity=0.073 Sum_probs=164.1
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCc-----cccccccCC--c----------------cccccCCCCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-----HITSSATDP--A----------------TAKSAGSSGS 60 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~-----~~~~~~~~~--~----------------~~~~~~~~~~ 60 (309)
+..|.+ .+.+++|+|||++|+++ .|+.|++||+.+ +........ . ..........
T Consensus 116 l~~~~~-~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 116 LFDTNE-ETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp EECCTT-CCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred ccCCcc-cccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 344555 67889999999999985 689999999987 533221111 1 1111222222
Q ss_pred eeecCC-------------------------------CCCCCCcccCCCCCcCccccc--ccccCCeEEEEEecCCCcEE
Q 021657 61 IIKQSP-------------------------------KPGDGNDKAADGPSVGPRGIY--NGHEDTVEDVTFCPSSAQEF 107 (309)
Q Consensus 61 ~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l 107 (309)
...+.. ......+.+|+..+.+..... ..|...+.+++|+|+| +.|
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l 272 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE-NIL 272 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS-SEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC-CEE
Confidence 111111 113456778887776644333 2466789999999999 667
Q ss_pred EEEcCCC-----eEEEEEcCCCCcceEEEee-ccCC---ceeEEEecc-CCCCeEEEEcCCCcEEEEecCCCCCCCCCCc
Q 021657 108 CSVGDDS-----CLILWDARVGTSPVIKVEK-AHDA---DLHCVDWNP-LDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177 (309)
Q Consensus 108 ~s~~~dg-----~i~iwd~~~~~~~~~~~~~-~~~~---~v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 177 (309)
++++.++ .|.+||+.+++. ...... .+.. .+.+++|+| .++++++++..|+.+++|++... +..
T Consensus 273 ~~~~~~~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~-----~~~ 346 (706)
T 2z3z_A 273 YVAEVNRAQNECKVNAYDAETGRF-VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT-----GRL 346 (706)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCE-EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT-----SCE
T ss_pred EEEEeCCCCCeeEEEEEECCCCce-eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC-----CCE
Confidence 7766665 899999988832 222221 2222 346789998 24668899999999999988721 566
Q ss_pred eeeeccCCCCeeE-EEEecCCCcEEEEecCCC----cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEc
Q 021657 178 INKFEGHSAAVLC-VQWSPDKSSVFGSSAEDG----LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252 (309)
Q Consensus 178 ~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 252 (309)
+..+..+...+.. ++|+|+++.+++++..++ .|..||+.. ++ ...+ .|...+.+++|+
T Consensus 347 ~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-~~---------------~~~l-~~~~~~~~~~~s 409 (706)
T 2z3z_A 347 IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG-GK---------------TKDL-TPESGMHRTQLS 409 (706)
T ss_dssp EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC-CC---------------CEES-CCSSSEEEEEEC
T ss_pred EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC-CC---------------ceec-cCCCceEEEEEC
Confidence 7777777777876 799999998877777766 566666554 11 1111 255678999999
Q ss_pred cCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 253 ASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 253 ~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|++.+++.+++.+ ..-+.|++||+..
T Consensus 410 pdg~~l~~~~~~~----~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 410 PDGSAIIDIFQSP----TVPRKVTVTNIGK 435 (706)
T ss_dssp TTSSEEEEEEECS----SCSCEEEEEESSS
T ss_pred CCCCEEEEEecCC----CCCcEEEEEECCC
Confidence 9999887766532 2336799999874
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=4.7e-20 Score=168.12 Aligned_cols=224 Identities=10% Similarity=0.060 Sum_probs=160.0
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC---------------ccccccC-CCCceeecCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP---------------ATAKSAG-SSGSIIKQSP 66 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---------------~~~~~~~-~~~~~~~~~~ 66 (309)
.+.+|.. +..++|+|+|++|+.+ .++.|.+||+...... .... ....... .......+..
T Consensus 240 ~l~~~~~--~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 240 KHTSFTD--YYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp ECCCCCS--SCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred EecCCCC--cceeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE
Confidence 4555554 4577999999999887 4899999998443221 1111 1111111 1111111111
Q ss_pred CCCCCCcccCCCCCcCcccccccccC-CeEEEEEecCCCcEEEEEcCCCeEE-EEEcCCCCcceEEEeeccCCceeEEEe
Q 021657 67 KPGDGNDKAADGPSVGPRGIYNGHED-TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDW 144 (309)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~v~~~~~ 144 (309)
.+.+.+|+....... .+..|.. .+..++|+ +| ..|+.++.++.+. +||+..++ . ..+..|...+..++|
T Consensus 316 ---~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~--~-~~l~~~~~~~~~~~~ 386 (1045)
T 1k32_A 316 ---RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGK--A-EKFEENLGNVFAMGV 386 (1045)
T ss_dssp ---TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCC--E-EECCCCCCSEEEEEE
T ss_pred ---cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCC--c-eEecCCccceeeeEE
Confidence 456777777665543 3556777 89999999 88 7788888888888 99988766 3 333477788999999
Q ss_pred ccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC----------CcEEEEe
Q 021657 145 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED----------GLLNIWD 214 (309)
Q Consensus 145 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d----------g~i~iwd 214 (309)
+| ++++|++++.++.|++||+.+ ++.......|...+.+++|+|||++++ .++.+ +.|++||
T Consensus 387 Sp-DG~~la~~~~~~~v~~~d~~t------g~~~~~~~~~~~~v~~~~~SpDG~~la-~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 387 DR-NGKFAVVANDRFEIMTVDLET------GKPTVIERSREAMITDFTISDNSRFIA-YGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp CT-TSSEEEEEETTSEEEEEETTT------CCEEEEEECSSSCCCCEEECTTSCEEE-EEEEECSSTTCSCCEEEEEEEE
T ss_pred CC-CCCEEEEECCCCeEEEEECCC------CceEEeccCCCCCccceEECCCCCeEE-EEecCccccccCCCCCeEEEEE
Confidence 99 999999999999999999998 777777767888899999999999764 44433 4899999
Q ss_pred CCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEec
Q 021657 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 263 (309)
+.. .. ...+..|...+..++|+|++.+++....
T Consensus 459 ~~~---------------g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 459 MEG---------------RK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTT---------------TE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCC---------------Cc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 986 11 3455667778899999999998775443
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=6.3e-20 Score=146.57 Aligned_cols=228 Identities=11% Similarity=0.127 Sum_probs=148.2
Q ss_pred CEEEEecCCCcEEEEeCCccccccccCC------ccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc-c----
Q 021657 22 PYVLSGGKDKSVVLWSIQDHITSSATDP------ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG-H---- 90 (309)
Q Consensus 22 ~~l~t~~~dg~i~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 90 (309)
++|++++.++.|++||+.++........ .............. ......+.+.+|+..+.+.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAY-ATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEE-EEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEE-EEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 4788899999999999987643322211 11111222221111 1123356788888877776655542 1
Q ss_pred cCCeEEEEEecCCCcEEEEEc------------CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVG------------DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
...+..++|+|++ ..+++++ .++.|.+||+.+++ ....+.. ...+.+++|+| ++++++++ +
T Consensus 81 ~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~ 153 (337)
T 1pby_B 81 VKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLS--RRKAFEA-PRQITMLAWAR-DGSKLYGL--G 153 (337)
T ss_dssp EECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--EEEEEEC-CSSCCCEEECT-TSSCEEEE--S
T ss_pred cccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCc--EEEEEeC-CCCcceeEECC-CCCEEEEe--C
Confidence 2257789999998 5666664 57999999998766 4444433 45678999999 88888887 6
Q ss_pred CcEEEEecCCCCCCCCCCceeeec--------------------------------------------------------
Q 021657 159 NSVRMFDRRNLTSNGVGSPINKFE-------------------------------------------------------- 182 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~~~~-------------------------------------------------------- 182 (309)
+.|++||+.+. +.+..+.
T Consensus 154 ~~i~~~d~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 154 RDLHVMDPEAG------TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp SSEEEEETTTT------EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred CeEEEEECCCC------cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 88999998762 2222111
Q ss_pred ----------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEc
Q 021657 183 ----------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWN 252 (309)
Q Consensus 183 ----------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 252 (309)
.+...+..++|+|++++++ ++ ++.|.+||+.. .+.+..+. ....+.+++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~--~~~v~~~d~~~---------------~~~~~~~~-~~~~~~~~~~s 288 (337)
T 1pby_B 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAF-GA--YNVLESFDLEK---------------NASIKRVP-LPHSYYSVNVS 288 (337)
T ss_dssp TCCEEEEEEEECSSCEEEEEECTTSSEEE-EE--ESEEEEEETTT---------------TEEEEEEE-CSSCCCEEEEC
T ss_pred CCCceEeecCCCCCceeeEEECCCCCEEE-Ee--CCeEEEEECCC---------------CcCcceec-CCCceeeEEEC
Confidence 1112355689999999765 44 78999999876 12222222 23457899999
Q ss_pred cCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 253 ASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 253 ~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
|++.+++++ +. |+.|++||+. +++.+..++
T Consensus 289 ~dg~~l~~~-~~-------~~~i~v~d~~------~~~~~~~~~ 318 (337)
T 1pby_B 289 TDGSTVWLG-GA-------LGDLAAYDAE------TLEKKGQVD 318 (337)
T ss_dssp TTSCEEEEE-SB-------SSEEEEEETT------TCCEEEEEE
T ss_pred CCCCEEEEE-cC-------CCcEEEEECc------CCcEEEEEE
Confidence 999877753 33 4899999998 455555444
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=1.5e-18 Score=140.32 Aligned_cols=245 Identities=11% Similarity=0.079 Sum_probs=151.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCC-cccccccc-----CCccccccCCCCc--eeecCC-------CC----CCC
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQ-DHITSSAT-----DPATAKSAGSSGS--IIKQSP-------KP----GDG 71 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~-~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~-------~~----~~~ 71 (309)
.+..++|+|+|++|++++.+ .|.+|++. ++...... ............. ...... +. .++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 45789999999999999888 99999986 44321110 0111112222222 111221 11 455
Q ss_pred CcccCCCCC-cCcccccc----cccCCeEEEEEecCCCcEEEEEc-CCCeEEEEEcC-CCCcceEEEee--ccCCceeEE
Q 021657 72 NDKAADGPS-VGPRGIYN----GHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDAR-VGTSPVIKVEK--AHDADLHCV 142 (309)
Q Consensus 72 ~~~~~~~~~-~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~~--~~~~~v~~~ 142 (309)
.+.+|+... ++....+. .+...+.+++|+|+| ++++++. .++.|.+||+. +++........ .+...+..+
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 677777653 33332232 245678999999999 5555544 57899999998 66532222232 235678999
Q ss_pred EeccCCCCeEEEEcC-CCcEEEEecCCCCCCCCCCce------eeecc----CCC------CeeEEE-EecCCCcEEEEe
Q 021657 143 DWNPLDDNLILTGSA-DNSVRMFDRRNLTSNGVGSPI------NKFEG----HSA------AVLCVQ-WSPDKSSVFGSS 204 (309)
Q Consensus 143 ~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~------~~~~~----~~~------~v~~~~-~~~~~~~l~~~~ 204 (309)
+|+| +++++++++. ++.|.+|++.... ++.. ..+.. +.. .+..++ |+|||++|+++.
T Consensus 199 ~~sp-dg~~l~v~~~~~~~v~v~~~~~~~----g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 199 AMHP-TGNYLYALMEAGNRICEYVIDPAT----HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EECT-TSSEEEEEETTTTEEEEEEECTTT----CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred EECC-CCCEEEEEECCCCeEEEEEEeCCC----CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 9999 8988877664 7899999876311 3321 12211 121 478999 999999876544
Q ss_pred cCCC-----cEEEEeCCcccccccCCCCCcCCCCceee-eecCCCcceeeEEEcc---CCCeEEEEecCCCCCCCCCCeE
Q 021657 205 AEDG-----LLNIWDYEKVGKKVEQGPRTTNYPAGLFF-QHAGHRDKVVDFHWNA---SDPWTVVSVSDDCDSTGGGGTL 275 (309)
Q Consensus 205 ~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~---~~~~~~~s~s~d~~s~~~dg~v 275 (309)
..+. .|.+|++...++.. .+. ....+...+..++|+| ++.+++++...+ +.|
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~~------------~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~-------~~v 334 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSIE------------KQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE-------GWL 334 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCEE------------EEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS-------CEE
T ss_pred CCCCCCCCCeEEEEEECCCCCEE------------EeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC-------CeE
Confidence 3333 89999996422211 111 1223445567899999 788877644443 899
Q ss_pred EEEEcc
Q 021657 276 QIWRMS 281 (309)
Q Consensus 276 ~vw~~~ 281 (309)
.+|++.
T Consensus 335 ~v~~~~ 340 (365)
T 1jof_A 335 EIYRWK 340 (365)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999997
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=2.8e-20 Score=163.53 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=143.8
Q ss_pred EEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC-
Q 021657 14 ALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED- 92 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 92 (309)
+++|+|+|++++++ .|+.|++||+.++.. ...+..|..
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~----------------------------------------~~~~~~~~~~ 58 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQS----------------------------------------YTILSNRTMK 58 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCE----------------------------------------EEEECHHHHH
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcE----------------------------------------EEEEcccccc
Confidence 78999999655554 699999999985421 222222322
Q ss_pred --CeEEEEEecCCCcEEEEEcC---------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 93 --TVEDVTFCPSSAQEFCSVGD---------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 93 --~v~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.+.+++|+|+| ++|+.++. ++.|++||+.+++......+ ...+..++|+| +++.|+.+. ++.|
T Consensus 59 ~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i 132 (719)
T 1z68_A 59 SVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNI 132 (719)
T ss_dssp TTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEE
T ss_pred ccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECC-CCCEEEEEE-CCeE
Confidence 48899999999 67777765 78999999987762000112 25688999999 999999885 7899
Q ss_pred EEEecCCCCCCCCCCceeee-ccCCCC-----------------eeEEEEecCCCcEEEEecCCC---------------
Q 021657 162 RMFDRRNLTSNGVGSPINKF-EGHSAA-----------------VLCVQWSPDKSSVFGSSAEDG--------------- 208 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~-~~~~~~-----------------v~~~~~~~~~~~l~~~~~~dg--------------- 208 (309)
++||+.+ ++..... .++... ..+++|+|||++| +.++.|.
T Consensus 133 ~~~~~~~------g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~l-a~~~~d~~~~~~~~~~~~~~~~ 205 (719)
T 1z68_A 133 YLKQRPG------DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFL-AYAEFNDTDIPVIAYSYYGDEQ 205 (719)
T ss_dssp EEESSTT------SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEE-EEEEEECTTSCEEEEEECCSSS
T ss_pred EEEeCCC------CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEE-EEEEECCCCCceEEeeccCCCC
Confidence 9999987 4443322 222221 2489999999975 4555331
Q ss_pred -------------------cEEEEeCCccccc--ccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCC
Q 021657 209 -------------------LLNIWDYEKVGKK--VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCD 267 (309)
Q Consensus 209 -------------------~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~ 267 (309)
.|++||+...... .. ...-..+.+|...+..++|+|++ .++++....
T Consensus 206 ~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~-- 273 (719)
T 1z68_A 206 YPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE---------VPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKR-- 273 (719)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEE---------CCCCHHHHTSCEEEEEEEESSSS-EEEEEEEES--
T ss_pred CccceeecCCCCCCCCCeeEEEEEECCCCCccceeE---------ccCCccCCCCcceEEEeEEeCCC-eEEEEEecc--
Confidence 6788888762210 00 00001234688889999999985 555553321
Q ss_pred CCCCCCeEEEEE----ccccccCChhhHhHhh----hcccceEE-----EeeeCC
Q 021657 268 STGGGGTLQIWR----MSDLIYRPQDEVLAEL----EKFKAHVI-----SCTSKP 309 (309)
Q Consensus 268 s~~~dg~v~vw~----~~~~~~~~~~~~~~~~----~~h~~~v~-----~~~~~P 309 (309)
......|.+|| +. ++++...+ .+|.+.+. .++|+|
T Consensus 274 -~~~~~~l~~~d~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 321 (719)
T 1z68_A 274 -VQNVSVLSICDFREDWQ------TWDCPKTQEHIEESRTGWAGGFFVSTPVFSY 321 (719)
T ss_dssp -STTEEEEEEEEECSSSS------SEECCGGGEEEEECSSSCSSSSSCCCCEECT
T ss_pred -ccCeEEEEEEcccCCCC------CCceEEEEecccccCCceEccccCCccEECC
Confidence 22235688899 65 44444444 35555555 566665
No 157
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=1.3e-16 Score=127.05 Aligned_cols=251 Identities=8% Similarity=0.019 Sum_probs=166.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc-c
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN-G 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 89 (309)
.|.+++++|+|+++++...++.+++++...... ..... ......+.+.+++..+.+.+..+. +
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~~~~~i~~~d~~~g~~~~~~~~~ 88 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFV---YQQRG-------------LGPIEEDTILVIDPNNAEILQSSGKN 88 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSC---BSCGG-------------GCSCCSCCEEEECTTTCCEEEEECTT
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCccee---ecccc-------------cccccCCcEEEEECCCCeEEeccCCC
Confidence 689999999999999988886554443322100 00000 000123445555555555443332 3
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe---------eccCCceeEEEeccCCCCeEEEEc-CCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE---------KAHDADLHCVDWNPLDDNLILTGS-ADN 159 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~-~dg 159 (309)
+-.....++++|+| .++++...++.|++||...... ....+ ..+......++++|.++.++++.+ .++
T Consensus 89 ~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 89 LFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred ccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 44578899999998 6888888899999999864421 12222 233446889999985577777775 689
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCC----------CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHS----------AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 229 (309)
.|++||. + +..+..+.... .....|+++|++..++++...++.|++||..+ ++
T Consensus 167 ~I~~~~~-~------g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~--------- 229 (329)
T 3fvz_A 167 RIVQFSP-S------GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KE--------- 229 (329)
T ss_dssp EEEEECT-T------SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CC---------
T ss_pred eEEEEcC-C------CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-Cc---------
Confidence 9999994 3 66666664222 23789999999555888888999999999874 22
Q ss_pred CCCCceeeee--cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh---hcccceEEE
Q 021657 230 NYPAGLFFQH--AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL---EKFKAHVIS 304 (309)
Q Consensus 230 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~---~~h~~~v~~ 304 (309)
.+..+ ..+...+.+++++| ..++++.+....+...+..|++|++. +++.+..+ .++...+..
T Consensus 230 -----~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~------~g~~~~~~~~~~~~~~~p~~ 296 (329)
T 3fvz_A 230 -----FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFS------SGEIIDVFKPVRKHFDMPHD 296 (329)
T ss_dssp -----EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETT------TCCEEEEECCSSSCCSSEEE
T ss_pred -----EEEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcC------CCeEEEEEcCCCCccCCeeE
Confidence 22222 34566788999999 45555555554456667899999988 56665555 355566778
Q ss_pred eeeCC
Q 021657 305 CTSKP 309 (309)
Q Consensus 305 ~~~~P 309 (309)
++++|
T Consensus 297 ia~~~ 301 (329)
T 3fvz_A 297 IVASE 301 (329)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 88775
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=4.9e-19 Score=155.66 Aligned_cols=239 Identities=13% Similarity=0.132 Sum_probs=149.8
Q ss_pred eEEEEECCCCCEEEEecC---------CCcEEEEeCCcccc---ccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 12 EFALAMCPTEPYVLSGGK---------DKSVVLWSIQDHIT---SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~---------dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
|.+++|||||++|++++. |+.|++||++++.. ............+..+....+. .+..+++|+..
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~---~~~~i~~~~~~ 138 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYV---YQNNIYLKQRP 138 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEE---ETTEEEEESST
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEE---ECCeEEEEeCC
Confidence 789999999999998876 79999999988754 2111111222222222222221 24578888887
Q ss_pred CcCccccc-ccccCCe-----------------EEEEEecCCCcEEEEEcCCC---------------------------
Q 021657 80 SVGPRGIY-NGHEDTV-----------------EDVTFCPSSAQEFCSVGDDS--------------------------- 114 (309)
Q Consensus 80 ~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~l~s~~~dg--------------------------- 114 (309)
+.+..... .++...| .++.|+||| +.|+.++.|.
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 76654332 2232222 489999999 6777776542
Q ss_pred -------eEEEEEcCCCCcc-eEE-----EeeccCCceeEEEeccCCCCeEEEEcCC----CcEEEEe----cCCCCCCC
Q 021657 115 -------CLILWDARVGTSP-VIK-----VEKAHDADLHCVDWNPLDDNLILTGSAD----NSVRMFD----RRNLTSNG 173 (309)
Q Consensus 115 -------~i~iwd~~~~~~~-~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~~~~~ 173 (309)
.|++||+.+++.. ... .+..|...+..++|+| +++++++.... ..|.+|| ..+
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~----- 291 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQT----- 291 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSS-----
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCC-----
Confidence 7889999876521 011 1235777899999999 77777664332 2488899 666
Q ss_pred CCCceeee----ccCCCCee-----EEEEecCCCcEEE-EecCCCc--EEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 174 VGSPINKF----EGHSAAVL-----CVQWSPDKSSVFG-SSAEDGL--LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 174 ~~~~~~~~----~~~~~~v~-----~~~~~~~~~~l~~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
++....+ ..+...+. .++|+|||+.++. +...+|. |.+||+.. ++ ...+..
T Consensus 292 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~-~~---------------~~~lt~ 354 (719)
T 1z68_A 292 -WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV-EN---------------AIQITS 354 (719)
T ss_dssp -EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS-TT---------------CEECSC
T ss_pred -CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC-Cc---------------eEeccc
Confidence 4444444 35666666 7899999997554 3545664 55566554 11 122334
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+...+..+.+. ++..++++++.. ...++..++|.+.
T Consensus 355 ~~~~v~~~~~~-d~~~i~~~~~~~---~~~~~~~~l~~~~ 390 (719)
T 1z68_A 355 GKWEAINIFRV-TQDSLFYSSNEF---EEYPGRRNIYRIS 390 (719)
T ss_dssp SSSCEEEEEEE-CSSEEEEEESCG---GGCTTCBEEEEEE
T ss_pred CceEEEEEEEE-eCCEEEEEEecC---CCCCceEEEEEEe
Confidence 45557777777 788888766540 0123789999986
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=3e-18 Score=150.96 Aligned_cols=218 Identities=12% Similarity=0.190 Sum_probs=133.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
...++.|+|||++++++ ||+|++||+.++........ ..+..+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~-----------------------------------~~~~~~ 60 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLEN-----------------------------------STFDEF 60 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECT-----------------------------------TTTTTC
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEec-----------------------------------hhhhhh
Confidence 35688999999999887 99999999986532111100 000112
Q ss_pred cCCeEEEEEecCCCcEEEEEcCC---------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDD---------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.....++.|+||| +.|+.++.+ +.+.+||+.+++ ...+..+...+...+|+| +|+.|+.+ .++.|
T Consensus 61 ~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~---~~~l~~~~~~~~~~~~SP-dG~~la~~-~~~~i 134 (740)
T 4a5s_A 61 GHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQ---LITEERIPNNTQWVTWSP-VGHKLAYV-WNNDI 134 (740)
T ss_dssp CSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTE---ECCSSCCCTTEEEEEECS-STTCEEEE-ETTEE
T ss_pred cccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCCc---EEEcccCCCcceeeEECC-CCCEEEEE-ECCeE
Confidence 2233568999999 677777765 567799998876 334556778899999999 99999888 57899
Q ss_pred EEEecCCCCCCCCCCcee-eeccCCCCe-----------------eEEEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 162 RMFDRRNLTSNGVGSPIN-KFEGHSAAV-----------------LCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~-~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
++||+.+ +...+ +..++...+ ..+.|+|||++|+.....++.+.+|++........
T Consensus 135 ~~~~~~~------~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~ 208 (740)
T 4a5s_A 135 YVKIEPN------LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL 208 (740)
T ss_dssp EEESSTT------SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTC
T ss_pred EEEECCC------CceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCC
Confidence 9999987 44332 122222222 35899999997543333334355554422111000
Q ss_pred CCC--------CC--c---------CCCC---c---eeeeec------CCCcceeeEEEccCCCeEEEEecCCCCCCCCC
Q 021657 224 QGP--------RT--T---------NYPA---G---LFFQHA------GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGG 272 (309)
Q Consensus 224 ~~~--------~~--~---------~~~~---~---~~~~~~------~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~d 272 (309)
..+ .. . .... . ....+. +|...+..++|+|++..++.... .++.+
T Consensus 209 ~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~----r~~~~ 284 (740)
T 4a5s_A 209 QYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLR----RIQNY 284 (740)
T ss_dssp SSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEE----SSTTE
T ss_pred CCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeC----CCCCE
Confidence 000 00 0 0000 0 111111 37778999999999875444332 23445
Q ss_pred CeEEEEEcc
Q 021657 273 GTLQIWRMS 281 (309)
Q Consensus 273 g~v~vw~~~ 281 (309)
..|++||+.
T Consensus 285 ~~i~~~d~~ 293 (740)
T 4a5s_A 285 SVMDICDYD 293 (740)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEECC
Confidence 789999998
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=1.3e-18 Score=149.38 Aligned_cols=233 Identities=11% Similarity=0.046 Sum_probs=152.4
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEecC---CCcEEEEeCCc----cccccccC-Ccc--ccccCCCCceeecCCCCCCCC
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSGGK---DKSVVLWSIQD----HITSSATD-PAT--AKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~~~---dg~i~vwd~~~----~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.+..|....|..++|+|| +++++++. +...++|.+.. ........ ... ...+++..... ... ....
T Consensus 58 ~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~--~s~-~~~~ 133 (582)
T 3o4h_A 58 KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVF--TGA-TEDR 133 (582)
T ss_dssp ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEEE--EEE-CSSC
T ss_pred eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEEE--Eec-CCCC
Confidence 455565337899999999 77777765 56666765543 22111111 111 11222222111 111 1233
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCC----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDD----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 148 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 148 (309)
..+|+..+.+...... +.. .++.|+|+| +.+++++.+ +.|++||+.+++ ...+..|...+..++|+| +
T Consensus 134 ~~l~d~~~g~~~~l~~-~~~--~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~g~---~~~l~~~~~~~~~~~~Sp-D 205 (582)
T 3o4h_A 134 VALYALDGGGLRELAR-LPG--FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSSGG---LRVFDSGEGSFSSASISP-G 205 (582)
T ss_dssp EEEEEEETTEEEEEEE-ESS--CEEEEEEET-TEEEEEEEEETTEEEEEEEETTTCC---CEEECCSSCEEEEEEECT-T
T ss_pred ceEEEccCCcEEEeec-CCC--ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCCCC---ceEeecCCCccccceECC-C
Confidence 3477776665544333 333 789999999 778877766 789999998877 235567888899999999 9
Q ss_pred CCeEEEEcCCC--cEEEEecCCCCCCCCCCceeeeccCCCCeeEEE--------EecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 149 DNLILTGSADN--SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQ--------WSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 149 ~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
++.|+++..++ .|++||+.+ ++.. .+..+...+..++ |+||| .++++++.|+.+++|++
T Consensus 206 G~~l~~~~~~~~~~i~~~d~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--- 274 (582)
T 3o4h_A 206 MKVTAGLETAREARLVTVDPRD------GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--- 274 (582)
T ss_dssp SCEEEEEECSSCEEEEEECTTT------CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET---
T ss_pred CCEEEEccCCCeeEEEEEcCCC------CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE---
Confidence 99999888888 899999987 6666 6666776677777 99999 57889999999999999
Q ss_pred cccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
++... .....+.+++|+ ++..+ ++++.+ ..-..+.+|+..
T Consensus 275 g~~~~-----------------~~~~~v~~~~~s-dg~~l-~~~s~~----~~p~~l~~~d~~ 314 (582)
T 3o4h_A 275 GERVE-----------------APQGNHGRVVLW-RGKLV-TSHTSL----STPPRIVSLPSG 314 (582)
T ss_dssp TEEEC-----------------CCSSEEEEEEEE-TTEEE-EEEEET----TEEEEEEEETTC
T ss_pred CCeec-----------------cCCCceEEEEec-CCEEE-EEEcCC----CCCCeEEEEcCC
Confidence 22110 223568899999 66554 544433 112346666654
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=2.9e-16 Score=122.49 Aligned_cols=235 Identities=12% Similarity=0.156 Sum_probs=154.6
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC---------Ccccccc-CCCCceeecCCCCCCCCccc
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD---------PATAKSA-GSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 75 (309)
+|-. .+.++++++++.++++...++.|++||.+......... ....... .....+... .......+..
T Consensus 27 g~~~-~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~-~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFT-EPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVT-ERSPTHQIQI 104 (286)
T ss_dssp TCBS-CEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEE-ECGGGCEEEE
T ss_pred CccC-CCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEE-cCCCCCEEEE
Confidence 4555 57899999999999998999999999987432111100 0000111 111111111 1112455666
Q ss_pred CCCCCcCcccccc-cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee--ccCCceeEEEeccCCCCeE
Q 021657 76 ADGPSVGPRGIYN-GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK--AHDADLHCVDWNPLDDNLI 152 (309)
Q Consensus 76 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l 152 (309)
++ .+.+.+..+. .+...+.++++++++ +++++...++.|.+||.. ++ ....+. .+...+..++++| +++++
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~--~~~~~~~~~~~~~p~~i~~~~-~g~l~ 178 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN-GN--VLHKFGCSKHLEFPNGVVVND-KQEIF 178 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SC--EEEEEECTTTCSSEEEEEECS-SSEEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCC-CC--EEEEeCCCCccCCcEEEEECC-CCCEE
Confidence 66 3444444342 234578999999998 788888888999999964 44 333332 3445689999999 88888
Q ss_pred EEEcCCCcEEEEecCCCCCCCCCCceeeeccC--CCCeeEEEEecCCCcEEEEecCCC-cEEEEeCCcccccccCCCCCc
Q 021657 153 LTGSADNSVRMFDRRNLTSNGVGSPINKFEGH--SAAVLCVQWSPDKSSVFGSSAEDG-LLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 153 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~dg-~i~iwd~~~~~~~~~~~~~~~ 229 (309)
++...++.|++||.. ++.+..+... ...+..++++++|. ++++...++ .|.+||... +
T Consensus 179 v~~~~~~~i~~~~~~-------g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g--~--------- 239 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-------GQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG--Q--------- 239 (286)
T ss_dssp EEEGGGTEEEEEETT-------CCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS--C---------
T ss_pred EEECCCCEEEEEcCC-------CCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCC--C---------
Confidence 888889999999974 5556666433 35688999999997 566777675 999999643 1
Q ss_pred CCCCceeeeecCC--CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 230 NYPAGLFFQHAGH--RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 230 ~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+..+..+ ...+.+++++|++. ++++. .| +.|++|++.
T Consensus 240 -----~~~~~~~~~~~~~~~~i~~~~~g~-l~vs~-~~-------~~v~v~~~~ 279 (286)
T 1q7f_A 240 -----LISALESKVKHAQCFDVALMDDGS-VVLAS-KD-------YRLYIYRYV 279 (286)
T ss_dssp -----EEEEEEESSCCSCEEEEEEETTTE-EEEEE-TT-------TEEEEEECS
T ss_pred -----EEEEEcccCCCCcceeEEECCCCc-EEEEC-CC-------CeEEEEEcc
Confidence 22222222 23477999999875 55542 34 899999987
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=2.8e-17 Score=133.93 Aligned_cols=210 Identities=13% Similarity=0.051 Sum_probs=137.5
Q ss_pred cccCCCCCcceEE-----EEECCCCCEEEEecC-CCc--EEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCc
Q 021657 2 EILTGHQDNAEFA-----LAMCPTEPYVLSGGK-DKS--VVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 2 ~~l~~H~~~~V~~-----~~~~~~~~~l~t~~~-dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
+.|..|.. .+.. .+|+|||++|+.++. +|. |.+||+.++.
T Consensus 24 ~~lt~~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~------------------------------- 71 (388)
T 3pe7_A 24 TRLTPPDV-TCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV------------------------------- 71 (388)
T ss_dssp EECSCTTS-CEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE-------------------------------
T ss_pred EEecCCcc-cccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-------------------------------
Confidence 34566665 4455 789999999998877 674 7777876432
Q ss_pred ccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEE--eccCCCCe
Q 021657 74 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD--WNPLDDNL 151 (309)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~ 151 (309)
......++...+..+.|+|++ +.|+.++.++.|++||+.+++ .......+...+.... ++| ++..
T Consensus 72 ---------~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~-dg~~ 138 (388)
T 3pe7_A 72 ---------ATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLE--ENVVYQVPAEWVGYGTWVANS-DCTK 138 (388)
T ss_dssp ---------EEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCC--EEEEEECCTTEEEEEEEEECT-TSSE
T ss_pred ---------eEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCc--ceeeeechhhcccccceeECC-CCCe
Confidence 222233344444467899999 778888888999999999887 3444444455444444 478 8887
Q ss_pred EEEE----------------------cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEec-CCCcEEEEecC--
Q 021657 152 ILTG----------------------SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-DKSSVFGSSAE-- 206 (309)
Q Consensus 152 l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~-- 206 (309)
++.. ..+..|.+||+.+ ++. ..+..+...+..++|+| +|+.++.+...
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~------g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~ 211 (388)
T 3pe7_A 139 LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT------GES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPH 211 (388)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT------CCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCT
T ss_pred eccccccCcccccccccchhhhhhccCCcceEEEEECCC------Cce-EEeecCCccccccEECCCCCCEEEEEEecCC
Confidence 7642 2346899999987 543 34444566789999999 99875433332
Q ss_pred ---CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC--cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 207 ---DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR--DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 207 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...|.++|+... . ...+..+. ..+..+.|+|++..++..... .+..+..|++||+.
T Consensus 212 ~~~~~~l~~~d~~~~-~---------------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~---~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 212 DLVDARMWLINEDGT-N---------------MRKVKTHAEGESCTHEFWVPDGSALVYVSYL---KGSPDRFIYSADPE 272 (388)
T ss_dssp TTSSCSEEEEETTSC-C---------------CEESCCCCTTEEEEEEEECTTSSCEEEEEEE---TTCCCEEEEEECTT
T ss_pred CCCcceEEEEeCCCC-c---------------eEEeeeCCCCcccccceECCCCCEEEEEecC---CCCCcceEEEEecC
Confidence 336777776541 1 11122222 357789999999876554332 23334569999998
Q ss_pred c
Q 021657 282 D 282 (309)
Q Consensus 282 ~ 282 (309)
.
T Consensus 273 ~ 273 (388)
T 3pe7_A 273 T 273 (388)
T ss_dssp T
T ss_pred C
Confidence 3
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=4.6e-17 Score=141.85 Aligned_cols=267 Identities=12% Similarity=0.072 Sum_probs=159.5
Q ss_pred ccCCCCCcceEEEEECCCCCEEEEe--cCCCcEEEEeCCcc-c-cccccCCcc-----------cc-c---cCCCCceee
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVLSG--GKDKSVVLWSIQDH-I-TSSATDPAT-----------AK-S---AGSSGSIIK 63 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~t~--~~dg~i~vwd~~~~-~-~~~~~~~~~-----------~~-~---~~~~~~~~~ 63 (309)
.+.+|.. .|..++|++++-++++. +.++...||....+ . ......... .. . +++...+..
T Consensus 18 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 18 LVASRSG-RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHTCS-CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHhhcCC-ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 4667888 79999999887777777 67899999995332 1 111111111 11 1 112110222
Q ss_pred cCCCCCCCCcccCCCC--CcCccccccc-----ccCCeEEEEEecCCCcEEEEEcCC----------CeEEEEEcCC---
Q 021657 64 QSPKPGDGNDKAADGP--SVGPRGIYNG-----HEDTVEDVTFCPSSAQEFCSVGDD----------SCLILWDARV--- 123 (309)
Q Consensus 64 ~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~--- 123 (309)
.... ...+..++.. .......+.. |...+..++|+|+| +.|+.++.+ ..|++||+.+
T Consensus 97 ~~~~--~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 97 THFG--DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EBTT--TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EECC--CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 2211 4455555554 2023334444 66788999999999 667777766 5899999987
Q ss_pred ---CCcceEEEee-ccCCceeEEEeccCCCCeEEEEcCC--------CcEEEEecC-CCCCCCCC---CceeeeccCCCC
Q 021657 124 ---GTSPVIKVEK-AHDADLHCVDWNPLDDNLILTGSAD--------NSVRMFDRR-NLTSNGVG---SPINKFEGHSAA 187 (309)
Q Consensus 124 ---~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~-~~~~~~~~---~~~~~~~~~~~~ 187 (309)
++ ...+. .+...+..++|+| ++++|+.++.+ ..|++||+. + + +.......+...
T Consensus 174 ~~~~~---~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~------g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 174 ADRSA---VRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTED------GRFADTRTLLGGPEEA 243 (662)
T ss_dssp TCGGG---SEESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTT------SCEEEEEEEEEETTBC
T ss_pred ccCCc---eeEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCC------CcccccEEeCCCCCce
Confidence 44 23444 5567788999999 99999877755 379999998 4 4 333333445678
Q ss_pred eeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCC
Q 021657 188 VLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDD 265 (309)
Q Consensus 188 v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d 265 (309)
+..++|+|||+ +++++..++ .|.+||+.. ++......... . . ....-...+..++|+|++..++
T Consensus 244 ~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~----~-~-~~p~w~~~~~~~~~~~~~~~~~------ 309 (662)
T 3azo_A 244 IAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT-GAATQLCRREE----E-F-AGPLWTPGMRWFAPLANGLIAV------ 309 (662)
T ss_dssp EEEEEECTTSC-EEEEECTTSSCEEEEECTTT-CCEEESSCCSS----B-S-SCCCCSTTCCSEEECTTSCEEE------
T ss_pred EcceEECCCCe-EEEEECCCCCeEEEEEECCC-Cceeecccccc----c-c-cCccccccCceEeEeCCCEEEE------
Confidence 99999999999 677888888 455555533 22111000000 0 0 0000001156788999777554
Q ss_pred CCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEe
Q 021657 266 CDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISC 305 (309)
Q Consensus 266 ~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~ 305 (309)
++.. +.++||.+.. ....+..+..|.+.+..+
T Consensus 310 --~~~~-~~~~l~~~d~-----~~~~~~~l~~~~~~~~~~ 341 (662)
T 3azo_A 310 --VHGK-GAAVLGILDP-----ESGELVDAAGPWTEWAAT 341 (662)
T ss_dssp --EEBS-SSCEEEEEET-----TTTEEEECCSSCCEEEEE
T ss_pred --EEEc-CccEEEEEEC-----CCCcEEEecCCCCeEEEE
Confidence 3334 6888885542 122355666666666655
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=2.1e-17 Score=131.87 Aligned_cols=138 Identities=15% Similarity=0.184 Sum_probs=104.4
Q ss_pred CCCCCcccCCCCCcCcccccccccC--CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-c----CCcee
Q 021657 68 PGDGNDKAADGPSVGPRGIYNGHED--TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-H----DADLH 140 (309)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~----~~~v~ 140 (309)
..++.+.+|+..+.+.+..+..... .+..++|+|++..+++++..++.|.+||+.+++ ....+.. + ...+.
T Consensus 8 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp ETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECCBTTEEEECTT
T ss_pred CCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcCCccccccccc
Confidence 3456778888888777666653221 478899999996667788888999999998877 4433332 2 22678
Q ss_pred EEEeccCCCCeEEEEc------------CCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC
Q 021657 141 CVDWNPLDDNLILTGS------------ADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208 (309)
Q Consensus 141 ~~~~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg 208 (309)
.++|+| ++++++++. .++.|.+||+.+ ++.+..+.. ...+..++|+|++++++ ++ ++
T Consensus 86 ~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~------~~~~~~~~~-~~~~~~~~~s~dg~~l~-~~--~~ 154 (337)
T 1pby_B 86 GAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAET------LSRRKAFEA-PRQITMLAWARDGSKLY-GL--GR 154 (337)
T ss_dssp CEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTT------TEEEEEEEC-CSSCCCEEECTTSSCEE-EE--SS
T ss_pred ceEECC-CCCEEEEEecccccccccccccCceEEEEECCC------CcEEEEEeC-CCCcceeEECCCCCEEE-Ee--CC
Confidence 899999 898888885 579999999987 777776664 45678899999999865 44 68
Q ss_pred cEEEEeCCcc
Q 021657 209 LLNIWDYEKV 218 (309)
Q Consensus 209 ~i~iwd~~~~ 218 (309)
.|.+||+...
T Consensus 155 ~i~~~d~~~~ 164 (337)
T 1pby_B 155 DLHVMDPEAG 164 (337)
T ss_dssp SEEEEETTTT
T ss_pred eEEEEECCCC
Confidence 8999999763
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=3.8e-17 Score=133.12 Aligned_cols=241 Identities=11% Similarity=0.068 Sum_probs=145.2
Q ss_pred CCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC--Cccc----cccCCCCceee---------------
Q 021657 5 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD--PATA----KSAGSSGSIIK--------------- 63 (309)
Q Consensus 5 ~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~--~~~~----~~~~~~~~~~~--------------- 63 (309)
.+|.. .+..++|+|||+.|+.++.++.|++||+.++....... .... ...........
T Consensus 77 ~~~~~-~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 77 EGRGD-NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp CSSCB-CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred eCCCC-CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccccc
Confidence 34444 44567899999999999999999999998874322111 1000 00011111111
Q ss_pred -----cCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEec-CCCcEEEEEcCC------CeEEEEEcCCCCcceEEE
Q 021657 64 -----QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCP-SSAQEFCSVGDD------SCLILWDARVGTSPVIKV 131 (309)
Q Consensus 64 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~ 131 (309)
.........+.+++..+.+. ..+..+...+..+.|+| +| ..|+....+ ..|.++|...++ . ..
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~--~-~~ 230 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGTN--M-RK 230 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSCC--C-EE
T ss_pred chhhhhhccCCcceEEEEECCCCce-EEeecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCCc--e-EE
Confidence 00122335667777776654 34445677899999999 88 666655543 378888876555 2 23
Q ss_pred eeccC--CceeEEEeccCCCCeEEEEcC-CC----cEEEEecCCCCCCCCCC--ceeeeccCCC---CeeEEEEecCCCc
Q 021657 132 EKAHD--ADLHCVDWNPLDDNLILTGSA-DN----SVRMFDRRNLTSNGVGS--PINKFEGHSA---AVLCVQWSPDKSS 199 (309)
Q Consensus 132 ~~~~~--~~v~~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~--~~~~~~~~~~---~v~~~~~~~~~~~ 199 (309)
+..+. ..+..++|+| +++.|+..+. ++ .|++||+.+ ++ .+..+..+.. ....++|+|||+.
T Consensus 231 l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~------g~~~~l~~~~~~~~~~~~~~~~~~spdg~~ 303 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVP-DGSALVYVSYLKGSPDRFIYSADPET------LENRQLTSMPACSHLMSNYDGSLMVGDGSD 303 (388)
T ss_dssp SCCCCTTEEEEEEEECT-TSSCEEEEEEETTCCCEEEEEECTTT------CCEEEEEEECCEEEEEECTTSSEEEEEECC
T ss_pred eeeCCCCcccccceECC-CCCEEEEEecCCCCCcceEEEEecCC------CceEEEEcCCCceeeeecCCCCeEccCCCc
Confidence 33333 3578899999 8887655433 22 399999987 44 2333332100 0122379999998
Q ss_pred EEEEe--------cCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc-----------ceeeEEEccCCCeEEE
Q 021657 200 VFGSS--------AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD-----------KVVDFHWNASDPWTVV 260 (309)
Q Consensus 200 l~~~~--------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~~~ 260 (309)
++++. ..+..|++||+.. ++ ...+..+.. .+..++|+|++..++.
T Consensus 304 l~~~~~~~~~~~~~~~~~i~~~d~~~-~~---------------~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~ 367 (388)
T 3pe7_A 304 APVDVQDDSGYKIENDPFLYVFNMKN-GT---------------QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILF 367 (388)
T ss_dssp C------------CCCCEEEEEETTT-TE---------------EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEE
T ss_pred ceeEeeeccccccCCCCEEEEEeccC-Cc---------------eEEeccccCcccccccccccCCCCccCCCCCCEEEE
Confidence 65433 4567899999986 21 122233333 5788999999998887
Q ss_pred EecCCCCCCCCCCeEEEEEcc
Q 021657 261 SVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 261 s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+...+ |...||.+.
T Consensus 368 ~s~~~-------g~~~l~~~~ 381 (388)
T 3pe7_A 368 TSDVH-------GKPALYLAT 381 (388)
T ss_dssp EECTT-------SSCEEEEEE
T ss_pred EecCC-------CceeEEEEE
Confidence 65544 667777665
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=2.8e-15 Score=119.35 Aligned_cols=205 Identities=13% Similarity=0.140 Sum_probs=142.7
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCcccc-ccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIT-SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
....++++|+|+++++...++.|++||...... ...... ......-.+
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~-------------------------------~~~~g~~~~ 140 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGR-------------------------------SMQPGSDQN 140 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESB-------------------------------TTBCCCSTT
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecc-------------------------------cCCCCCCcc
Confidence 468999999999999999999999999864310 000000 000000012
Q ss_pred ccCCeEEEEEec-CCCcEEEEEc-CCCeEEEEEcCCCCcceEEEeec----------cCCceeEEEeccCC-CCeEEEEc
Q 021657 90 HEDTVEDVTFCP-SSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKA----------HDADLHCVDWNPLD-DNLILTGS 156 (309)
Q Consensus 90 ~~~~v~~~~~~~-~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~-~~~l~~~~ 156 (309)
+-.....++++| ++ .++++.+ .++.|++||. .++ ....+.. +-.....++++| + +.++++..
T Consensus 141 ~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~-~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~ 215 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFSP-SGK--FVTQWGEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADR 215 (329)
T ss_dssp CCSSEEEEEECTTTC-CEEEEECSSCCEEEEECT-TSC--EEEEECEECCSSSCCTTEESCEEEEEEET-TTTEEEEEET
T ss_pred ccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEcC-CCC--EEEEeccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEEC
Confidence 445688999999 55 7788876 6899999994 455 3444422 223478999999 6 78888888
Q ss_pred CCCcEEEEecCCCCCCCCCCceeeec--cCCCCeeEEEEec------CCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINKFE--GHSAAVLCVQWSP------DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~------~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
.++.|++||..+ ++.+..+. .+...+..++++| ++. ++++...+..|++||+.. +
T Consensus 216 ~~~~I~~~~~~~------G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~-g--------- 278 (329)
T 3fvz_A 216 ENGRIQCFKTDT------KEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSS-G--------- 278 (329)
T ss_dssp TTTEEEEEETTT------CCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTT-C---------
T ss_pred CCCEEEEEECCC------CcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCC-C---------
Confidence 899999999987 77777774 3456788999999 333 222334456899999876 2
Q ss_pred cCCCCceeeee---cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 229 TNYPAGLFFQH---AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 229 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.+..+ .++...+.+++++|++ .++++...+ +.|++|++.
T Consensus 279 -----~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~-------~~I~~~~~~ 321 (329)
T 3fvz_A 279 -----EIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHT-------NTVWKFTLT 321 (329)
T ss_dssp -----CEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSS-------CCEEEEEEE
T ss_pred -----eEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCC-------CEEEEEeCC
Confidence 223333 3566778999999988 677766555 899999997
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=4.7e-16 Score=124.07 Aligned_cols=211 Identities=9% Similarity=0.057 Sum_probs=137.0
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+.++.. .+.+++|+|+|++++++..++.|.+||.+++..
T Consensus 40 ~~~~~~-~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~---------------------------------------- 78 (333)
T 2dg1_A 40 ISKKGL-QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI---------------------------------------- 78 (333)
T ss_dssp EESSCC-CEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----------------------------------------
T ss_pred EeccCc-cccCcEECCCCCEEEEECCCCEEEEEeCCCCcE----------------------------------------
Confidence 444555 468899999999888888889999998864311
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCC----CeEEEEEcCCCCcceEEEee--ccCCceeEEEeccCCCCeEEEEcC
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDD----SCLILWDARVGTSPVIKVEK--AHDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
......+...+.++++++++ .++++...+ +.|.+||..++.. ..... .....+..++++| +++++++...
T Consensus 79 ~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~ 154 (333)
T 2dg1_A 79 KRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNL--QDIIEDLSTAYCIDDMVFDS-KGGFYFTDFR 154 (333)
T ss_dssp EEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSC--EEEECSSSSCCCEEEEEECT-TSCEEEEECC
T ss_pred EEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEE--EEEEccCccCCcccceEECC-CCCEEEEecc
Confidence 11111345679999999998 677776666 6899999887662 22222 2345789999999 8887776653
Q ss_pred ------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCC
Q 021657 158 ------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNY 231 (309)
Q Consensus 158 ------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 231 (309)
.+.|..+|... ++. ..+......+..++|+|+++.++++.+.++.|.+||++..+......
T Consensus 155 ~~~~~~~~~l~~~~~~~------~~~-~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~------ 221 (333)
T 2dg1_A 155 GYSTNPLGGVYYVSPDF------RTV-TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF------ 221 (333)
T ss_dssp CBTTBCCEEEEEECTTS------CCE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE------
T ss_pred ccccCCCceEEEEeCCC------CEE-EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc------
Confidence 24566666554 332 23322334578999999998777677778899999986422211100
Q ss_pred CCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 232 PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 232 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.......+.++ ..+..+++++++..++ +...+ +.|.+||..
T Consensus 222 ~~~~~~~~~~~-~~~~~i~~d~~G~l~v-~~~~~-------~~v~~~d~~ 262 (333)
T 2dg1_A 222 GATIPYYFTGH-EGPDSCCIDSDDNLYV-AMYGQ-------GRVLVFNKR 262 (333)
T ss_dssp EEEEEEECCSS-SEEEEEEEBTTCCEEE-EEETT-------TEEEEECTT
T ss_pred cceEEEecCCC-CCCCceEECCCCCEEE-EEcCC-------CEEEEECCC
Confidence 00011112222 4678899999887544 33333 789999875
No 168
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=9e-16 Score=134.65 Aligned_cols=232 Identities=9% Similarity=-0.033 Sum_probs=147.1
Q ss_pred CCCCcceEEEEECCCCCEEEEecCCC-----cEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGKDK-----SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+|.. .+..++|||||++||.++.++ .|++||+.++...
T Consensus 122 ~~~~-~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~------------------------------------ 164 (710)
T 2xdw_A 122 DGTV-ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL------------------------------------ 164 (710)
T ss_dssp TSCE-EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE------------------------------------
T ss_pred CCCE-EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC------------------------------------
Confidence 3444 688999999999998665543 8999999864221
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCe----------------EEEEEcCCCCcceEEEee--ccCCceeEE
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC----------------LILWDARVGTSPVIKVEK--AHDADLHCV 142 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~----------------i~iwd~~~~~~~~~~~~~--~~~~~v~~~ 142 (309)
.....+ ..+..++|+||| +.|+.++.++. |++|++.++......... .+...+..+
T Consensus 165 ----~~~~~~-~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 165 ----PDVLER-VKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp ----EEEEEE-ECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ----cccccC-cccceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 111111 225678999999 56666666655 999999876633233332 245567899
Q ss_pred EeccCCCCeEEEEcC-----CCcEEEEecCCCCCCC-CCCceeeeccCCCCeeEEEEecCCCcEEEEecCC---CcEEEE
Q 021657 143 DWNPLDDNLILTGSA-----DNSVRMFDRRNLTSNG-VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED---GLLNIW 213 (309)
Q Consensus 143 ~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d---g~i~iw 213 (309)
.|+| ++++|+..+. +..|++||+.+..... .......+..+...+.. .|+|+|..+++.+..+ +.|.+|
T Consensus 239 ~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 239 ELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp EECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 9999 9998887764 5689999987510000 01134455555555554 5889999876565543 369999
Q ss_pred eCCcccccccCCCCCcCCCCceeeeecCCCc--ceeeEEEccCCCeEEEEecCCCCCCCCCCe--EEEEEccccccCChh
Q 021657 214 DYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD--KVVDFHWNASDPWTVVSVSDDCDSTGGGGT--LQIWRMSDLIYRPQD 289 (309)
Q Consensus 214 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~--v~vw~~~~~~~~~~~ 289 (309)
|+...... ....+..|.. .+..+.|++ +..++++...| +. |.+|++. ++
T Consensus 317 d~~~~~~~-------------~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~-------g~~~l~~~~~~------~g 369 (710)
T 2xdw_A 317 DFTDPEES-------------KWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHD-------VKNTLQLHDLA------TG 369 (710)
T ss_dssp ETTSCCGG-------------GCEEEECCCSSCEEEEEEEET-TTEEEEEEEET-------TEEEEEEEETT------TC
T ss_pred eCCCCCcc-------------cceeccCCCCCCeEEEEEEEc-CCEEEEEEEEC-------CEEEEEEEECC------CC
Confidence 98762210 1122333433 678899986 56677776665 64 5556664 34
Q ss_pred hHhHhhhcccceEEEeeeCC
Q 021657 290 EVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 290 ~~~~~~~~h~~~v~~~~~~P 309 (309)
+.+..+..+.+.|..++++|
T Consensus 370 ~~~~~l~~~~~~v~~~~~s~ 389 (710)
T 2xdw_A 370 ALLKIFPLEVGSVVGYSGQK 389 (710)
T ss_dssp CEEEEECCCSSEEEEEECCT
T ss_pred CEEEecCCCCceEEEEecCC
Confidence 44555666677777777765
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=2.1e-16 Score=127.23 Aligned_cols=255 Identities=10% Similarity=0.036 Sum_probs=162.0
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEeCCccccccccCC----------ccccccCCCCceeecCCCCCCCCc
Q 021657 14 ALAMCPTEPYVLSGG----------KDKSVVLWSIQDHITSSATDP----------ATAKSAGSSGSIIKQSPKPGDGND 73 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~----------~dg~i~vwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 73 (309)
.++|+|||++|+++. .++.|.+||..+......... ......+......+.........+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 899999999998876 367899999987533222110 111122222323332222235678
Q ss_pred ccCCCCCcCcccc-cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE------eeccCCceeEEEecc
Q 021657 74 KAADGPSVGPRGI-YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV------EKAHDADLHCVDWNP 146 (309)
Q Consensus 74 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~v~~~~~~~ 146 (309)
.+++..+.+.+.. +.. .+ ...+.+.|++...+++.+.||.+.+|+...... .... +.....+ ..+.++|
T Consensus 134 ~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~-~~~~~~~~~~~~~~~~~-~~~~~~~ 209 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK-VASQSRSKQMFSVKDDP-IFIAPAL 209 (361)
T ss_dssp EEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSS-EEEEEECCCCSCTTTSC-BCSCCEE
T ss_pred EEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCc-EeeeccccceEcCCCCc-eEEEecc
Confidence 8888888776665 432 22 233567787767888999999999999865321 2211 1112222 2334456
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC----------CCCeeEEEEecCCCcEEEEec----------C
Q 021657 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH----------SAAVLCVQWSPDKSSVFGSSA----------E 206 (309)
Q Consensus 147 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~----------~ 206 (309)
++..++..+.++.+.++|+.... ...+..+... ......++++|++.+++++.. .
T Consensus 210 -~g~~~~~~~~~~~v~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~ 284 (361)
T 2oiz_A 210 -DKDKAHFVSYYGNVYSADFSGDE----VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFP 284 (361)
T ss_dssp -CSSEEEEEBTTSEEEEEECSSSS----CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCC
T ss_pred -cCCEEEEEeCCCeEEEEEecCCC----ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCC
Confidence 66677777788999999987521 1112221100 111223789999998876654 1
Q ss_pred CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 207 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
.+.|.+||+.+ .+.+..+..+. +.+++|+|++.+++++. . +.|.+||..
T Consensus 285 ~~~v~viD~~t---------------~~~v~~i~~~~--p~~ia~spdg~~l~v~n--------~-~~v~v~D~~----- 333 (361)
T 2oiz_A 285 AAEIWVMDTKT---------------KQRVARIPGRD--ALSMTIDQQRNLMLTLD--------G-GNVNVYDIS----- 333 (361)
T ss_dssp CSEEEEEETTT---------------TEEEEEEECTT--CCEEEEETTTTEEEEEC--------S-SCEEEEECS-----
T ss_pred CceEEEEECCC---------------CcEEEEEecCC--eeEEEECCCCCEEEEeC--------C-CeEEEEECC-----
Confidence 35899999987 44555666666 89999999999777432 2 799999998
Q ss_pred Chh--hHhHhhhcccceEEEeeeCC
Q 021657 287 PQD--EVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 287 ~~~--~~~~~~~~h~~~v~~~~~~P 309 (309)
++ +.+.++..+......++++|
T Consensus 334 -t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 334 -QPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp -SSSCEEEEEETTSCSSEEEEEECC
T ss_pred -CCcceeeEEeccCCCCcEEEEecC
Confidence 67 77777766677778888877
No 170
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=1.8e-15 Score=122.13 Aligned_cols=200 Identities=12% Similarity=0.098 Sum_probs=120.4
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCC----CeEEEEEcCCC--CcceEEEeeccCCceeEEEeccCCCCeEEEE-cCCCcEE
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDD----SCLILWDARVG--TSPVIKVEKAHDADLHCVDWNPLDDNLILTG-SADNSVR 162 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~ 162 (309)
+...+..++|+|++ ++|++++.+ +.|.+|++... +.........+......+++ ++++++++ ..++.|.
T Consensus 48 ~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT---NGKNIVTANYSGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE---CSSEEEEEETTTTEEE
T ss_pred cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE---CCCEEEEEECCCCEEE
Confidence 56677889999999 667777765 89999998763 32223333334556677777 45555554 4688999
Q ss_pred EEecCCCCCCCCCCceeeecc--------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccc----c-ccCCCCCc
Q 021657 163 MFDRRNLTSNGVGSPINKFEG--------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK----K-VEQGPRTT 229 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~----~-~~~~~~~~ 229 (309)
+|++................+ +...+.+++|+|+|++++++...++.|.+|++..... . +..
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~----- 198 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLT----- 198 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE-----
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceee-----
Confidence 999975211000000011111 1223578999999998887777789999999876321 0 000
Q ss_pred CCCC-ceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 230 NYPA-GLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 230 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
. ........+...+..++|+|++.+++++...+ +.|.+|++...... ....+.....+......++|+
T Consensus 199 ---~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-------~~v~v~~~~~g~~~-~~~~~~~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 199 ---KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG-------GTVIAFRYADGMLD-EIQTVAADTVNAQGSGDIHLS 267 (361)
T ss_dssp ---EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-------CEEEEEEEETTEEE-EEEEEESCSSCCCCEEEEEEC
T ss_pred ---cccccceecCCCCCCeEEEEcCCCCEEEEEcCCC-------CeEEEEEecCCceE-EeEEEecCCCCCCCcccEEEC
Confidence 0 00111123345578999999999888765544 89999999721100 000111222333445777787
Q ss_pred C
Q 021657 309 P 309 (309)
Q Consensus 309 P 309 (309)
|
T Consensus 268 p 268 (361)
T 3scy_A 268 P 268 (361)
T ss_dssp T
T ss_pred C
Confidence 6
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=1.5e-15 Score=119.12 Aligned_cols=219 Identities=10% Similarity=0.033 Sum_probs=147.6
Q ss_pred ccCCCCCcceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.+..+.. ...+++|+|+++ +++++..++.|..||..++
T Consensus 22 ~l~~~~~-~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---------------------------------------- 60 (296)
T 3e5z_A 22 RLADGFT-WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---------------------------------------- 60 (296)
T ss_dssp EEECCCS-SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----------------------------------------
T ss_pred EEecCCc-cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----------------------------------------
Confidence 3444555 568999999998 7888999999999998742
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec----cCCceeEEEeccCCCCeEEE---
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA----HDADLHCVDWNPLDDNLILT--- 154 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~--- 154 (309)
...+..+...+.+++++++| .++++...++.|.+||..+++ ....... ....+..++++| +++++++
T Consensus 61 --~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~ 134 (296)
T 3e5z_A 61 --LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGE--WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPT 134 (296)
T ss_dssp --EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCC--EEEEECEETTEECCCCCCEEECT-TSCEEEEECS
T ss_pred --eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCc--EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCc
Confidence 12233355678999999998 777777777899999997777 2222211 123467899999 8988887
Q ss_pred -EcC-------------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccc
Q 021657 155 -GSA-------------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 155 -~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
|+. .+.|..+|.. ..+..+..+....+.++|+|+++.+ ++.+.++.|.+|++...+.
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~--------g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~ 205 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPD--------GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGE 205 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTT--------SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSC
T ss_pred cccccccccccccccCCCcEEEEECCC--------CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCc
Confidence 331 2345555433 2233444455677899999999976 7888889999999873222
Q ss_pred c-ccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhccc
Q 021657 221 K-VEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFK 299 (309)
Q Consensus 221 ~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~ 299 (309)
. .. .... ..+...+..+++++++..+++ . + +.|.+|+.. ++.+..+..+.
T Consensus 206 ~~~~----------~~~~--~~~~~~p~~i~~d~~G~l~v~-~--~-------~~v~~~~~~-------g~~~~~~~~~~ 256 (296)
T 3e5z_A 206 TEYQ----------GVHF--TVEPGKTDGLRVDAGGLIWAS-A--G-------DGVHVLTPD-------GDELGRVLTPQ 256 (296)
T ss_dssp EEEE----------EEEE--CCSSSCCCSEEEBTTSCEEEE-E--T-------TEEEEECTT-------SCEEEEEECSS
T ss_pred CcCC----------CeEe--eCCCCCCCeEEECCCCCEEEE-c--C-------CeEEEECCC-------CCEEEEEECCC
Confidence 1 00 0111 234556788999998875443 2 2 789999975 34445555455
Q ss_pred ceEEEeee
Q 021657 300 AHVISCTS 307 (309)
Q Consensus 300 ~~v~~~~~ 307 (309)
. +.+++|
T Consensus 257 ~-~~~~~f 263 (296)
T 3e5z_A 257 T-TSNLCF 263 (296)
T ss_dssp C-CCEEEE
T ss_pred C-ceeEEE
Confidence 5 666666
No 172
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=2.4e-14 Score=110.63 Aligned_cols=233 Identities=9% Similarity=-0.024 Sum_probs=148.3
Q ss_pred eEEEEECCCCCEEE-EecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 12 EFALAMCPTEPYVL-SGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 12 V~~~~~~~~~~~l~-t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
..+++++++|++++ +.+.++.|.+||..+........ ............+.... . .+.+..++.........
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~-~--~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTD-F--NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEE-T--TTEEEEECTTCSCCEEC
T ss_pred ccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEc-C--CCEEEEEeCCCceEeee
Confidence 57999999999777 55788999999986653221111 11111112222222211 1 44566666554433222
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
.......+.++++.+++ .++++...++.|.+|+..+.. ...........+.++++++ +++++++...++.|.+||.
T Consensus 103 ~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKT--QTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp CCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCS--CEECCCCSCCSCCCEEECT-TCCEEEEEGGGTEEEEECT
T ss_pred ecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCce--eEeeccccCCCceeEEEeC-CCCEEEEECCCCEEEEEec
Confidence 12233568999999988 677777778899999865444 2222223334678999999 8888888777889999998
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
.. .............+..|+++++|. ++++...++.|.+|+...... ......+...+
T Consensus 179 ~~------~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~---------------~~~~~~~~~~p 236 (270)
T 1rwi_B 179 ES------NNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTS---------------TVLPFTGLNTP 236 (270)
T ss_dssp TT------CCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCC---------------EECCCCSCSCE
T ss_pred CC------CceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcc---------------eeeccCCCCCc
Confidence 76 433332223336688999999995 677777788999999865111 11111233568
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.+++++|++. ++++.+.+ +.|+++++.
T Consensus 237 ~~i~~~~~g~-l~v~~~~~-------~~v~~~~~~ 263 (270)
T 1rwi_B 237 LAVAVDSDRT-VYVADRGN-------DRVVKLTSL 263 (270)
T ss_dssp EEEEECTTCC-EEEEEGGG-------TEEEEECCC
T ss_pred eeEEECCCCC-EEEEECCC-------CEEEEEcCC
Confidence 8999999886 66655555 899999998
No 173
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=2.2e-15 Score=131.84 Aligned_cols=202 Identities=9% Similarity=-0.008 Sum_probs=132.6
Q ss_pred CCCCcceEEEEECCCCCEEE-----EecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 6 GHQDNAEFALAMCPTEPYVL-----SGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~-----t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+|.. .+.+++|||||++|| .|+.+..|++||+.++.....
T Consensus 118 ~~~~-~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~---------------------------------- 162 (695)
T 2bkl_A 118 DGTV-SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV---------------------------------- 162 (695)
T ss_dssp SSCE-EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS----------------------------------
T ss_pred CCCE-EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC----------------------------------
Confidence 5665 789999999999998 555667999999986432100
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCCe-------------EEEEEcCCCCcc--eEEEeeccCCceeEEEec
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC-------------LILWDARVGTSP--VIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~-------------i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~ 145 (309)
..+... ....++|+|+| +.|+.++.|.. |++|++.++... .+.....+...+..+.|+
T Consensus 163 ----~~~~~~--~~~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 163 ----DVIEGG--KYATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp ----CCBSCC--TTCCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred ----cccCcc--cccceEEecCC-CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 001111 12578999999 66777777665 999999877632 222233455678899999
Q ss_pred cCCCCeEEEEcCCC----cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec---CCCcEEEEeCCcc
Q 021657 146 PLDDNLILTGSADN----SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA---EDGLLNIWDYEKV 218 (309)
Q Consensus 146 ~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~dg~i~iwd~~~~ 218 (309)
| ++++|+..+.++ .|+++|..+ +. ...+..+...+....+ ++|. +++... .++.|.+||+...
T Consensus 236 p-DG~~l~~~~~~~~~~~~l~~~~~~~------~~-~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 236 R-DGKYLFVYILRGWSENDVYWKRPGE------KD-FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp T-TSCCEEEEEEETTTEEEEEEECTTC------SS-CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred C-CCCEEEEEEeCCCCceEEEEEcCCC------Cc-eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 9 899888877665 677776543 33 3444445555566666 6777 665655 3588999998762
Q ss_pred cccccCCCCCcCCCCceeeeec-CC-CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHA-GH-RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
... ....+. .+ ...+..++|+ +..++++.+.| +..+||.+.
T Consensus 306 ~~~-------------~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~d-------g~~~l~~~~ 348 (695)
T 2bkl_A 306 ARA-------------SWKEIVPEDSSASLLSVSIV--GGHLSLEYLKD-------ATSEVRVAT 348 (695)
T ss_dssp SGG-------------GCEEEECCCSSCEEEEEEEE--TTEEEEEEEET-------TEEEEEEEE
T ss_pred Ccc-------------CCeEEecCCCCCeEEEEEEE--CCEEEEEEEEC-------CEEEEEEEe
Confidence 210 011122 22 4567888887 55778877766 888888775
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=2e-15 Score=133.05 Aligned_cols=206 Identities=10% Similarity=0.118 Sum_probs=131.0
Q ss_pred EEEEECCCCCEEEEecCC---------CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 13 FALAMCPTEPYVLSGGKD---------KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
..++|||||++|+.++.+ +.+.+||+.++.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~----------------------------------------- 103 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ----------------------------------------- 103 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-----------------------------------------
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc-----------------------------------------
Confidence 347899999999998876 556799987542
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCce-----------------eEEEecc
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL-----------------HCVDWNP 146 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~ 146 (309)
...+..|...+...+|+|+| +.||.+ .++.|++||+.+++. ......++...+ ..+.|+|
T Consensus 104 ~~~l~~~~~~~~~~~~SPdG-~~la~~-~~~~i~~~~~~~~~~-~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp 180 (740)
T 4a5s_A 104 LITEERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNLPS-YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP 180 (740)
T ss_dssp ECCSSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTSCC-EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT
T ss_pred EEEcccCCCcceeeEECCCC-CEEEEE-ECCeEEEEECCCCce-EEEcCCCCccceecCcccccccchhcCCCcceEECC
Confidence 12244566789999999999 667766 468999999987762 122222322222 3589999
Q ss_pred CCCCeEEEEcCCC------------------------------------cEEEEecCC---CCCCCCCCceeeec-----
Q 021657 147 LDDNLILTGSADN------------------------------------SVRMFDRRN---LTSNGVGSPINKFE----- 182 (309)
Q Consensus 147 ~~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~~~~~~~~~~~~~----- 182 (309)
+++.|+.++.|. .|++||+.+ .. ......+.
T Consensus 181 -Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~----~~~~~~l~~~~~~ 255 (740)
T 4a5s_A 181 -NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVT----NATSIQITAPASM 255 (740)
T ss_dssp -TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSS----CCCEEEECCCHHH
T ss_pred -CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCC----cceEEEecCCccC
Confidence 999988875332 366777765 21 00222333
Q ss_pred -cCCCCeeEEEEecCCCcEEEEe---cCCCcEEEEeCCcccc---cccCCCCCcCCCCceeeeecCCCccee-----eEE
Q 021657 183 -GHSAAVLCVQWSPDKSSVFGSS---AEDGLLNIWDYEKVGK---KVEQGPRTTNYPAGLFFQHAGHRDKVV-----DFH 250 (309)
Q Consensus 183 -~~~~~v~~~~~~~~~~~l~~~~---~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~ 250 (309)
++...+..++|+|||+.++... ..+..|.+||+..... ... ...+ ...+|...|. .+.
T Consensus 256 ~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~---------~~~l-~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 256 LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV---------ARQH-IEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG---------GGCE-EEECSSSCSSSSSCCCCE
T ss_pred CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE---------EEEe-eeccCCceEccCcCCCce
Confidence 2667789999999998543332 2234799999887220 000 0000 1134555544 789
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
|+|++..++...|++ . ....|++|++.
T Consensus 326 fspDG~~l~~~~s~~--~--G~~~l~~~~~~ 352 (740)
T 4a5s_A 326 FTLDGNSFYKIISNE--E--GYRHICYFQID 352 (740)
T ss_dssp ECTTSSEEEEEEECT--T--SCEEEEEEETT
T ss_pred EcCCCCEEEEEEEcC--C--CceEEEEEECC
Confidence 999999877455543 2 24678888876
No 175
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.69 E-value=7.1e-16 Score=123.65 Aligned_cols=140 Identities=10% Similarity=0.028 Sum_probs=100.3
Q ss_pred CCCCCcccCCCCCcCccccccccc-CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc------CCcee
Q 021657 68 PGDGNDKAADGPSVGPRGIYNGHE-DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH------DADLH 140 (309)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~ 140 (309)
..++.+.+|+..+.+.+..+..+. ..+..++|+|++..+++++..++.|.+||+.+++ ....+... ...+.
T Consensus 18 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~--~~~~~~~~~~~~~~~~~~~ 95 (349)
T 1jmx_B 18 NYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK--NTFHANLSSVPGEVGRSMY 95 (349)
T ss_dssp ETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEESCCSTTEEEECSS
T ss_pred CCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--EEEEEEccccccccccccc
Confidence 346778888888887776665443 2578899999995566777789999999998776 44443322 22378
Q ss_pred EEEeccCCCCeEEEEcCC------------CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC
Q 021657 141 CVDWNPLDDNLILTGSAD------------NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 208 (309)
Q Consensus 141 ~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg 208 (309)
.++|+| +++++++++.+ +.|.+||+.+... .+.+..+. +...+.+++|+|+++ +++ ++ +
T Consensus 96 ~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~ 166 (349)
T 1jmx_B 96 SFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE---AKPVRTFP-MPRQVYLMRAADDGS-LYV-AG--P 166 (349)
T ss_dssp CEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG---BCCSEEEE-CCSSCCCEEECTTSC-EEE-ES--S
T ss_pred ceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccc---cceeeecc-CCCcccceeECCCCc-EEE-cc--C
Confidence 999999 99999988865 8999999987211 12223333 334688999999999 665 43 3
Q ss_pred cEEEEeCCcc
Q 021657 209 LLNIWDYEKV 218 (309)
Q Consensus 209 ~i~iwd~~~~ 218 (309)
.|.+||+...
T Consensus 167 ~i~~~d~~~~ 176 (349)
T 1jmx_B 167 DIYKMDVKTG 176 (349)
T ss_dssp SEEEECTTTC
T ss_pred cEEEEeCCCC
Confidence 4999999763
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.69 E-value=3.4e-15 Score=130.14 Aligned_cols=195 Identities=10% Similarity=0.058 Sum_probs=124.9
Q ss_pred CCCcceEEEEECCCCCEEEEecCC----------CcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccC
Q 021657 7 HQDNAEFALAMCPTEPYVLSGGKD----------KSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 76 (309)
Q Consensus 7 H~~~~V~~~~~~~~~~~l~t~~~d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (309)
|.. .+..++|+|||++|++++.| ..|++||+.+....
T Consensus 128 ~~~-~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------------------------- 174 (662)
T 3azo_A 128 GGL-RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA-------------------------------- 174 (662)
T ss_dssp TCE-EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT--------------------------------
T ss_pred CCc-cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc--------------------------------
Confidence 555 68899999999999988877 58999998741000
Q ss_pred CCCCcCcccccc-cccCCeEEEEEecCCCcEEEEEcCC--------CeEEEEEcC-CCCc-ceEEEeeccCCceeEEEec
Q 021657 77 DGPSVGPRGIYN-GHEDTVEDVTFCPSSAQEFCSVGDD--------SCLILWDAR-VGTS-PVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~-~~~~-~~~~~~~~~~~~v~~~~~~ 145 (309)
... ....+. .+...+..++|+|+| +.|+.++.+ ..|++||+. ++.. ........+...+..+.|+
T Consensus 175 --~~~-~~~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 175 --DRS-AVRELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp --CGG-GSEESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred --cCC-ceeEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 000 112222 344567888999999 666665543 479999998 4521 1333444556789999999
Q ss_pred cCCCCeEEEEcCCC--cEEEEecCCCCCCCCCCceeeeccCCCC--------eeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 146 PLDDNLILTGSADN--SVRMFDRRNLTSNGVGSPINKFEGHSAA--------VLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 146 ~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
| ++++++++..++ .|.+||+.+ ++.......+... +..++|+|++. +++++.. +.++||.+
T Consensus 251 p-dg~l~~~~~~~~~~~l~~~~~~~------~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 251 P-DGSLIVATDRTGWWNLHRVDPAT------GAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAVLGIL 321 (662)
T ss_dssp T-TSCEEEEECTTSSCEEEEECTTT------CCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEE
T ss_pred C-CCeEEEEECCCCCeEEEEEECCC------CceeecccccccccCccccccCceEeEeCCCE-EEEEEEc-CccEEEEE
Confidence 9 888888888888 566666654 4433322222211 56789999988 5668887 99999955
Q ss_pred CcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEe
Q 021657 216 EKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSV 262 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 262 (309)
...+ ..+..+..|...+..+ |++++..+++++
T Consensus 322 d~~~--------------~~~~~l~~~~~~~~~~-~s~~~~~~~~~~ 353 (662)
T 3azo_A 322 DPES--------------GELVDAAGPWTEWAAT-LTVSGTRAVGVA 353 (662)
T ss_dssp ETTT--------------TEEEECCSSCCEEEEE-EEEETTEEEEEE
T ss_pred ECCC--------------CcEEEecCCCCeEEEE-EecCCCEEEEEE
Confidence 4311 1133445566667666 144555555443
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=7e-15 Score=117.89 Aligned_cols=205 Identities=10% Similarity=0.156 Sum_probs=127.8
Q ss_pred ceEEEEECCCCCEEEEecCC---Cc--EEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccc
Q 021657 11 AEFALAMCPTEPYVLSGGKD---KS--VVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG 85 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~d---g~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (309)
.+..++|+|||++|+..+.+ +. |.+|++.++. ..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~----------------------------------------~~- 98 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS----------------------------------------SK- 98 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE----------------------------------------EE-
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc----------------------------------------eE-
Confidence 46789999999999877654 33 6667765321 11
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcC---------------------------CCeEEEEEcCCCCcceEEEeeccCCc
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGD---------------------------DSCLILWDARVGTSPVIKVEKAHDAD 138 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~---------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~ 138 (309)
.+..+.. +..+.|+|+| +.|+.++. ...|.+||+.+++ ....+.. . .
T Consensus 99 ~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~--~~~~l~~-~-~ 172 (347)
T 2gop_A 99 KILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE--VIEEFEK-P-R 172 (347)
T ss_dssp EEEEESE-EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE--EEEEEEE-E-T
T ss_pred EEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe--EEeeecC-C-C
Confidence 1222233 8999999999 55555542 2579999998776 3133333 3 7
Q ss_pred eeEEEeccCCCCeEEEEcCCC-------cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC----
Q 021657 139 LHCVDWNPLDDNLILTGSADN-------SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED---- 207 (309)
Q Consensus 139 v~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d---- 207 (309)
+..++|+| ++ +++++..++ ...+|.+.+ ++.. .+..+ ..+..+ +|+|++++..+..+
T Consensus 173 ~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~------~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~ 240 (347)
T 2gop_A 173 FSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWED------GKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYM 240 (347)
T ss_dssp TCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEET------TEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCC
T ss_pred cccccCCC-Ce-EEEEEecccccccccccccEEEeCC------CceE-EeccC-cceeeE--CCCCCEEEEEEccccCCc
Confidence 88999999 88 777775542 344554443 4432 33333 445444 99999865444332
Q ss_pred ---CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee-EEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 208 ---GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD-FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 208 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
..|.+|| . ++ .......+...+.. +.|+ ++ ++++++.+ +.++|| +.
T Consensus 241 ~~~~~l~~~d--~-~~--------------~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~-------~~~~l~-~~-- 290 (347)
T 2gop_A 241 SEHNKLYIYD--G-KE--------------VMGILDEVDRGVGQAKIKD-GK--VYFTLFEE-------GSVNLY-IW-- 290 (347)
T ss_dssp CSSCEEEEEC--S-SC--------------EEESSTTCCSEEEEEEEET-TE--EEEEEEET-------TEEEEE-EE--
T ss_pred cccceEEEEC--C-Cc--------------eEeccccCCcccCCccEEc-Cc--EEEEEecC-------CcEEEE-Ec--
Confidence 4677787 2 21 11222345667776 8999 66 66666655 899999 87
Q ss_pred ccCChhhHhHhhhcccceEEEeeeCC
Q 021657 284 IYRPQDEVLAELEKFKAHVISCTSKP 309 (309)
Q Consensus 284 ~~~~~~~~~~~~~~h~~~v~~~~~~P 309 (309)
.++. ..+..+.+.|.+++|+|
T Consensus 291 ----~g~~-~~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 291 ----DGEI-KPIAKGRHWIMGFDVDE 311 (347)
T ss_dssp ----SSSE-EEEECSSSEEEEEEESS
T ss_pred ----CCce-EEEecCCCeEEeeeeeC
Confidence 2222 23334577888888876
No 178
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.68 E-value=1.1e-14 Score=117.56 Aligned_cols=161 Identities=7% Similarity=0.073 Sum_probs=110.6
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcC-CCCcceEEEeec-cCCceeEEEeccCCCCe--EEEEc-----------
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDAR-VGTSPVIKVEKA-HDADLHCVDWNPLDDNL--ILTGS----------- 156 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~--l~~~~----------- 156 (309)
..+..++|+|++ ++|++++.+ .|.+|++. +++ ....... ....+..++|+| ++++ ++++.
T Consensus 40 ~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~--~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 40 EPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTE--IVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTE--EEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCC--EEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceecccee
Confidence 467889999999 677777777 99999997 555 2222211 112366789999 8884 45553
Q ss_pred --CCCcEEEEecCCCCCCCCCCceeeec----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcC
Q 021657 157 --ADNSVRMFDRRNLTSNGVGSPINKFE----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 230 (309)
Q Consensus 157 --~dg~i~i~d~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 230 (309)
.+|.+.+|++... ++....+. .+...+..++|+|+|++++++...++.|++||+...++.
T Consensus 115 ~~~~g~v~v~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~--------- 180 (365)
T 1jof_A 115 YKFAGYGNVFSVSET-----GKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV--------- 180 (365)
T ss_dssp SSSCCEEEEEEECTT-----CCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE---------
T ss_pred ecCCceEEEEccCCC-----CcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE---------
Confidence 6899999999742 44333332 245678999999999987655555789999999721221
Q ss_pred CCCceeeeec--CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 231 YPAGLFFQHA--GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 231 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+.... .|...+..++|+|++.+++++...+ +.|.+|++.
T Consensus 181 ---~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-------~~v~v~~~~ 223 (365)
T 1jof_A 181 ---ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-------NRICEYVID 223 (365)
T ss_dssp ---EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-------TEEEEEEEC
T ss_pred ---EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-------CeEEEEEEe
Confidence 1112222 2456789999999999887655444 899999886
No 179
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.66 E-value=9e-15 Score=117.05 Aligned_cols=194 Identities=9% Similarity=0.025 Sum_probs=131.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.++.+++++...++++|+.+ .+++|+++.......... ...++. ....+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~-----------------------------~~~~~~-~~~~l 87 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDS-----------------------------TPLTFK-WEKEI 87 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSS-----------------------------CCCCCS-EEEEC
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccc-----------------------------ccccce-EEeeC
Confidence 47899999999999999998 555699875421111000 001111 12235
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
.. |+.++| ++ ..|+++ .++.|++||+++.. .......+...+.++.+.+ . .++++..||.|.+||+.+
T Consensus 88 p~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~-- 155 (388)
T 1xip_A 88 PD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRT-- 155 (388)
T ss_dssp TT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTT--CEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTT--
T ss_pred CC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhh--ccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccC--
Confidence 56 999999 66 778887 88999999998776 3445567778888888766 3 288889999999999997
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccc-ccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK-VEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
+.... +...|++++|+|+| + +.|..||.+++|+....... ....+.. . .+....+|...|.++
T Consensus 156 ----~~~~~----~~~~Vs~v~WSpkG--~-~vg~~dg~i~~~~~~~~~~~~k~~I~~P----p-~~~~~~~~~~~V~sI 219 (388)
T 1xip_A 156 ----KSTKQ----LAQNVTSFDVTNSQ--L-AVLLKDRSFQSFAWRNGEMEKQFEFSLP----S-ELEELPVEEYSPLSV 219 (388)
T ss_dssp ----CCEEE----EEESEEEEEECSSE--E-EEEETTSCEEEEEEETTEEEEEEEECCC----H-HHHTSCTTTSEEEEE
T ss_pred ----Ccccc----ccCCceEEEEcCCc--e-EEEEcCCcEEEEcCCCccccccceecCC----c-ccccccCCCeeEEEE
Confidence 44432 34589999999999 3 47888999999987652210 0000000 0 001112477899999
Q ss_pred EEccCCCeEEEEec
Q 021657 250 HWNASDPWTVVSVS 263 (309)
Q Consensus 250 ~~~~~~~~~~~s~s 263 (309)
.|.+++.++++-..
T Consensus 220 ~wl~~~~flv~y~~ 233 (388)
T 1xip_A 220 TILSPQDFLAVFGN 233 (388)
T ss_dssp EESSSSEEEEEEEC
T ss_pred EEecCCeEEEEEcC
Confidence 99998776665443
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.66 E-value=3.7e-15 Score=121.62 Aligned_cols=230 Identities=10% Similarity=-0.007 Sum_probs=135.6
Q ss_pred EEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCC-----------------------CCceeecC---CC
Q 021657 14 ALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGS-----------------------SGSIIKQS---PK 67 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~---~~ 67 (309)
.+.|+|||++|+.++.++.|++||+.++...............+ ......+. ..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 47899999999999999999999998763222111000000000 00000000 01
Q ss_pred CCCCCcccCCCCCcCcccccccccCCeEEEEEec-CCCcEEEEEcCC------CeEEEEEcCCCCcceEEEeecc-CCce
Q 021657 68 PGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCP-SSAQEFCSVGDD------SCLILWDARVGTSPVIKVEKAH-DADL 139 (309)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~-~~~v 139 (309)
.....+.+++..+.+.... ..+...+..+.|+| ++ ..|+..+.+ ..|.+||+..++ ........ ...+
T Consensus 165 ~~~~~l~~~d~~~g~~~~~-~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVI-HQDTAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESC 240 (396)
T ss_dssp CCCEEEEEEETTTCCEEEE-EEESSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEE
T ss_pred CCcceEEEEECCCCcEEee-ccCCcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccc
Confidence 2344566777766554433 35677889999999 66 545544433 468888986655 22222211 2357
Q ss_pred eEEEeccCCCCeEEEEcCC-----CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEec-CCCcEEEEec--------
Q 021657 140 HCVDWNPLDDNLILTGSAD-----NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-DKSSVFGSSA-------- 205 (309)
Q Consensus 140 ~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-------- 205 (309)
..++|+| +++.|+.++.+ +.|++||+.+ ++...... .. ... +.|+| +|+.++ .++
T Consensus 241 ~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~------g~~~~l~~-~~-~~~-~~~s~~dg~~l~-~~~~~~p~~~~ 309 (396)
T 3c5m_A 241 THEFWIP-DGSAMAYVSYFKGQTDRVIYKANPET------LENEEVMV-MP-PCS-HLMSNFDGSLMV-GDGCDAPVDVA 309 (396)
T ss_dssp EEEEECT-TSSCEEEEEEETTTCCEEEEEECTTT------CCEEEEEE-CC-SEE-EEEECSSSSEEE-EEECCC-----
T ss_pred cceEECC-CCCEEEEEecCCCCccceEEEEECCC------CCeEEeee-CC-CCC-CCccCCCCceEE-EecCCcceeec
Confidence 8899999 88877766543 4499999987 44332221 12 233 89999 999544 432
Q ss_pred --------CCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc-----------ceeeEEEccCCCeEEEEecCCC
Q 021657 206 --------EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD-----------KVVDFHWNASDPWTVVSVSDDC 266 (309)
Q Consensus 206 --------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~~~s~s~d~ 266 (309)
.+..|++||+... +. ..+..+.. .+..+.|+|++..++.+...+
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~-~~---------------~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~- 372 (396)
T 3c5m_A 310 DADSYNIENDPFLYVLNTKAK-SA---------------QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE- 372 (396)
T ss_dssp -----CCCCCCEEEEEETTTT-BC---------------CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-
T ss_pred cccccccCCCCcEEEEecccC-ce---------------EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-
Confidence 3478999998762 11 11222222 256788999998877655443
Q ss_pred CCCCCCCeEEEEEcc
Q 021657 267 DSTGGGGTLQIWRMS 281 (309)
Q Consensus 267 ~s~~~dg~v~vw~~~ 281 (309)
+...+|.+.
T Consensus 373 ------~~~~l~~~~ 381 (396)
T 3c5m_A 373 ------GVPAIYIAD 381 (396)
T ss_dssp ------SSCEEEEEE
T ss_pred ------CCceEEEEE
Confidence 555566554
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=1.5e-15 Score=123.86 Aligned_cols=201 Identities=10% Similarity=0.044 Sum_probs=125.0
Q ss_pred eEEEEECCCCCEEEEecC---CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 12 EFALAMCPTEPYVLSGGK---DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
+..++|+|||++|+.... +..|.+||+.++... ....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~----------------------------------------~l~~ 77 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV----------------------------------------QLTE 77 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE----------------------------------------ECCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE----------------------------------------Eeec
Confidence 567899999999876643 246788887653211 1111
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeE-------------------EEeccCCC
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHC-------------------VDWNPLDD 149 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~ 149 (309)
.+......+.|+|+| +.|+.++.++.|++||+.+++ .......+...... +.|+| ++
T Consensus 78 ~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg 153 (396)
T 3c5m_A 78 GKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLETLE--EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LT 153 (396)
T ss_dssp SSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTTCC--EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CC
T ss_pred CCCCccccceECCCC-CEEEEEEcCCcEEEEECCCCC--cEEEEecccccCCCCCEEEeccCCccccccccccccCC-CC
Confidence 112222236899999 778888888899999998877 33333333332222 35677 66
Q ss_pred CeEEEE-----cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEec-CCCcEEEEecC-C----CcEEEEeCCcc
Q 021657 150 NLILTG-----SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-DKSSVFGSSAE-D----GLLNIWDYEKV 218 (309)
Q Consensus 150 ~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~-d----g~i~iwd~~~~ 218 (309)
+.++.. ..+..|++||+.+ ++..... .+...+..+.|+| ++..++.+... . ..|.+||+...
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~------g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 154 SWEKFAEFYHTNPTCRLIKVDIET------GELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp SHHHHHHHHHTCCCEEEEEEETTT------CCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred cceeeeeeccCCCcceEEEEECCC------CcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC
Confidence 666554 3566899999987 5544333 4566789999999 78755433321 1 46888887641
Q ss_pred cccccCCCCCcCCCCceeeeecCC--CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGH--RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+. ..+..+ ...+..++|+|++.+++..... .+..++.|++||+..
T Consensus 227 -~~---------------~~l~~~~~~~~~~~~~~spdg~~l~~~~~~---~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 227 -NV---------------RKIKEHAEGESCTHEFWIPDGSAMAYVSYF---KGQTDRVIYKANPET 273 (396)
T ss_dssp -CC---------------EESSCCCTTEEEEEEEECTTSSCEEEEEEE---TTTCCEEEEEECTTT
T ss_pred -ce---------------eEeeccCCCccccceEECCCCCEEEEEecC---CCCccceEEEEECCC
Confidence 11 111112 2357889999999876655433 233345699999873
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.63 E-value=2.5e-14 Score=114.05 Aligned_cols=194 Identities=8% Similarity=-0.011 Sum_probs=134.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.++.|++++..++..+.++.++.|.-. ....+..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~ 43 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITAE-------------------------------------------PWLEISKK 43 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEECE-------------------------------------------EEEEEESS
T ss_pred ccceeeecCCccceeEEeecccCcccccc-------------------------------------------eeEEEecc
Confidence 46788888888777777778888888321 12334445
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC----CcEEEEec
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD----NSVRMFDR 166 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d~ 166 (309)
...+.+++|++++ .+++++..++.|.+||..+++ .......+...+.+++++| +++++++...+ +.|.+||.
T Consensus 44 ~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 44 GLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKE--IKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp CCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCC--EEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECT
T ss_pred CccccCcEECCCC-CEEEEECCCCEEEEEeCCCCc--EEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeC
Confidence 5667899999998 677788889999999998776 3333334567899999999 88888877666 68999998
Q ss_pred CCCCCCCCCCceeeec--cCCCCeeEEEEecCCCcEEEEecC------CCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 167 RNLTSNGVGSPINKFE--GHSAAVLCVQWSPDKSSVFGSSAE------DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.+ ......+. .....++.++++|+|. ++++... .+.|..+|... ++ +..
T Consensus 120 ~~------~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~-~~---------------~~~ 176 (333)
T 2dg1_A 120 NG------DNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF-RT---------------VTP 176 (333)
T ss_dssp TS------CSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTS-CC---------------EEE
T ss_pred CC------CEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCC-CE---------------EEE
Confidence 87 44332222 2345789999999998 4545443 24455555432 11 111
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+..+...+..++|+|++..++++.+.+ +.|.+|++.
T Consensus 177 ~~~~~~~~~~i~~~~dg~~l~v~~~~~-------~~i~~~d~~ 212 (333)
T 2dg1_A 177 IIQNISVANGIALSTDEKVLWVTETTA-------NRLHRIALE 212 (333)
T ss_dssp EEEEESSEEEEEECTTSSEEEEEEGGG-------TEEEEEEEC
T ss_pred eecCCCcccceEECCCCCEEEEEeCCC-------CeEEEEEec
Confidence 112223478899999988777765554 799999986
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=3.7e-13 Score=105.46 Aligned_cols=190 Identities=8% Similarity=0.063 Sum_probs=127.3
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
+..+.. .+.+++++|+|+++++...++.|.+||..++......
T Consensus 64 ~~~~~~-~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~------------------------------------ 106 (296)
T 3e5z_A 64 EMHPSH-HQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA------------------------------------ 106 (296)
T ss_dssp EESSCS-SEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE------------------------------------
T ss_pred EECCCC-CcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe------------------------------------
Confidence 344555 6889999999998888888899999998654211000
Q ss_pred ccccc-cccCCeEEEEEecCCCcEEEE----Ec-------------CCCeEEEEEcCCCCcceEEEeeccCCceeEEEec
Q 021657 84 RGIYN-GHEDTVEDVTFCPSSAQEFCS----VG-------------DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 145 (309)
Q Consensus 84 ~~~~~-~~~~~v~~~~~~~~~~~~l~s----~~-------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 145 (309)
.... .....+.+++++|+| +++++ |+ ..+.|..++.. ++ ......+......++|+
T Consensus 107 -~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 107 -DSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT---LSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp -CEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---EEEEECCCSSEEEEEEC
T ss_pred -eccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CC---EEEeecCCCCCccEEEC
Confidence 0000 112346789999998 77776 32 13456666554 33 33344556677899999
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCc---eeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccc
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSP---INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 222 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~ 222 (309)
| +++.+++.+.++.|.+||+... +.. ...+..+...+..++++++|. ++++. ++.|.+||...
T Consensus 181 ~-dg~~lv~~~~~~~i~~~~~~~~-----g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g----- 246 (296)
T 3e5z_A 181 P-SGNLLVSDTGDNATHRYCLNAR-----GETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDG----- 246 (296)
T ss_dssp T-TSCEEEEETTTTEEEEEEECSS-----SCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTS-----
T ss_pred C-CCCEEEEeCCCCeEEEEEECCC-----CcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCC-----
Confidence 9 8888888888899999999731 333 223333455677899999998 55444 78899999763
Q ss_pred cCCCCCcCCCCceeeeecCCCcceeeEEE-ccCCCeEEEEe
Q 021657 223 EQGPRTTNYPAGLFFQHAGHRDKVVDFHW-NASDPWTVVSV 262 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~s~ 262 (309)
..+..+..+.. +.+++| .|++..|+++.
T Consensus 247 -----------~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 247 -----------DELGRVLTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp -----------CEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred -----------CEEEEEECCCC-ceeEEEECCCCCEEEEEc
Confidence 23344555556 899999 58877777654
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.59 E-value=3.4e-12 Score=99.87 Aligned_cols=237 Identities=8% Similarity=0.017 Sum_probs=148.6
Q ss_pred cCCCCCcceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc-ccC----CccccccCCCCceeecCCCCCCCCcccCCC
Q 021657 4 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS-ATD----PATAKSAGSSGSIIKQSPKPGDGNDKAADG 78 (309)
Q Consensus 4 l~~H~~~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (309)
+..+.. .+.+++++++|.++++...++.|.+||.. +.... ... ............+... ....+.+..++.
T Consensus 10 ~~~~~~-~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDT-GPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFT--ENAANKIGRITK 85 (299)
T ss_dssp CCSSSC-CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEE--ETTTTEEEEECT
T ss_pred CCCcCC-CccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEe--CCCCCeEEEECC
Confidence 344444 68999999999988877778999999987 42211 111 0011111112221111 122334555554
Q ss_pred CCcCccccc--ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc
Q 021657 79 PSVGPRGIY--NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 79 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
. .+ ...+ ......+.++++.+++ .++++...++.|..||. +++. ...........+..+++++ ++.++++..
T Consensus 86 ~-g~-~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~ 159 (299)
T 2z2n_A 86 K-GI-IKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKI-REYELPNKGSYPSFITLGS-DNALWFTEN 159 (299)
T ss_dssp T-SC-EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECT-TSCEEEEET
T ss_pred C-Cc-EEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCE-EEecCCCCCCCCceEEEcC-CCCEEEEeC
Confidence 3 11 1112 2244578999999988 77777777889999998 5552 1122223445789999999 888888777
Q ss_pred CCCcEEEEecCCCCCCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 157 ADNSVRMFDRRNLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 157 ~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
.++.|..||. + ++.... .......+..+++++++. ++++...++.|.+||. . +...
T Consensus 160 ~~~~i~~~~~-~------g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~-g~~~------------- 216 (299)
T 2z2n_A 160 QNNAIGRITE-S------GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-S-GEIT------------- 216 (299)
T ss_dssp TTTEEEEECT-T------CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-T-CCEE-------------
T ss_pred CCCEEEEEcC-C------CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-C-CcEE-------------
Confidence 7889999998 5 444332 333345688999999988 5666666889999998 3 2211
Q ss_pred eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 236 FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
......+...+.++++++++. ++++... ++.|..||..
T Consensus 217 ~~~~~~~~~~~~~i~~~~~g~-l~v~~~~-------~~~i~~~d~~ 254 (299)
T 2z2n_A 217 EFKIPTPNARPHAITAGAGID-LWFTEWG-------ANKIGRLTSN 254 (299)
T ss_dssp EEECSSTTCCEEEEEECSTTC-EEEEETT-------TTEEEEEETT
T ss_pred EEECCCCCCCceeEEECCCCC-EEEeccC-------CceEEEECCC
Confidence 112233456788999999877 4443322 3789999874
No 185
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=3.9e-13 Score=105.31 Aligned_cols=222 Identities=10% Similarity=0.082 Sum_probs=142.2
Q ss_pred eEEEEECCC-CCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 12 EFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 12 V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
--+..|+|+ +.++++...++.|..||..++.. .. ...
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-----------------------------------------~~-~~~ 52 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-----------------------------------------QR-VTM 52 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-----------------------------------------EE-EEC
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-----------------------------------------EE-EeC
Confidence 457889995 55677778899999999874311 11 112
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec--cCCceeEEEeccCCCCeEEEEcCC---------C
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA--HDADLHCVDWNPLDDNLILTGSAD---------N 159 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d---------g 159 (309)
...+.++++++++ .++++ . +..|.+||..+++......... ....+..++++| +++++++.... .
T Consensus 53 ~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 53 DAPVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp SSCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTT
T ss_pred CCceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCC
Confidence 4568999999998 55544 3 5679999988766222211111 123478899999 88876654321 2
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC-cccccccCCCCCcCCCCceeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE-KVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
...+|.+... ++ +..+.......+.++|+|+++.++++.+.++.|.+|++. ..+.... ...+..
T Consensus 129 ~~~l~~~d~~-----g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~---------~~~~~~ 193 (297)
T 3g4e_A 129 QGALYSLFPD-----HH-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN---------RRSVYK 193 (297)
T ss_dssp CEEEEEECTT-----SC-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE---------EEEEEE
T ss_pred CcEEEEEECC-----CC-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC---------cEEEEE
Confidence 3455555431 22 222322334568999999999888788888999999985 2222100 122333
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
+..+......+++++++. +.++.... +.|..||.. +++.+..+..+...+++++|.
T Consensus 194 ~~~~~~~p~g~~~d~~G~-lwva~~~~-------~~v~~~d~~------tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 194 LEKEEQIPDGMCIDAEGK-LWVACYNG-------GRVIRLDPV------TGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp CCGGGCEEEEEEEBTTSC-EEEEEETT-------TEEEEECTT------TCCEEEEEECSSSBEEEEEEE
T ss_pred CCCCCCCCCeeEECCCCC-EEEEEcCC-------CEEEEEcCC------CceEEEEEECCCCCceEEEEe
Confidence 333445678999999886 44443333 789999987 567777777666678888885
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=5e-13 Score=105.51 Aligned_cols=226 Identities=11% Similarity=0.077 Sum_probs=141.3
Q ss_pred ceEEEEECCCCCEEEE-------ecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 11 AEFALAMCPTEPYVLS-------GGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t-------~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
...+++|++++.++++ +..++.|.+||..++.......
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~----------------------------------- 63 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK----------------------------------- 63 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-----------------------------------
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-----------------------------------
Confidence 3579999999988888 6788999999976432110000
Q ss_pred ccccccccCCeEEEEEecC-CCcEEEEEcCCCeEEEEEcCCCCcceEEE-eec----cCCceeEEEeccCCCCeEEEEcC
Q 021657 84 RGIYNGHEDTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGTSPVIKV-EKA----HDADLHCVDWNPLDDNLILTGSA 157 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~~~~~ 157 (309)
....++...+.+++++++ + .++++.. ...|.+||.. ++ .... ... ....+.++++++ +++++++...
T Consensus 64 -~~~~~~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~ 136 (314)
T 1pjx_A 64 -PEVNGYGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GT--FEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPA 136 (314)
T ss_dssp -CEETTEECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SC--EEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECB
T ss_pred -cccCCCCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CC--EEEEEeccCCCccccCCcCEEECC-CCCEEEEecC
Confidence 000123456889999998 6 6555554 4479999987 65 2222 111 123578999999 8888777665
Q ss_pred C---------------CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEe----cCCCcEEEEecCCCcEEEEeCCcc
Q 021657 158 D---------------NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS----PDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 158 d---------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
+ +.|..||.. ++.. .+.........++++ |+++.++++...++.|.+||+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~-------g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 137 GEVAPADYTRSMQEKFGSIYCFTTD-------GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp CBCTTSCCCBTTSSSCEEEEEECTT-------SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred cccccccccccccCCCCeEEEECCC-------CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC
Confidence 5 456666643 2222 222233456889999 999777767777899999998631
Q ss_pred cccccCCCCCcCCCCceeeeecCCC-cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGHR-DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEK 297 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~ 297 (309)
+.... ...+..+..+. ..+..+++++++..++ +... ++.|.+||.. +++.+..+..
T Consensus 209 g~~~~---------~~~~~~~~~~~~~~p~~i~~d~~G~l~v-~~~~-------~~~i~~~d~~------~g~~~~~~~~ 265 (314)
T 1pjx_A 209 AKIEN---------KKVWGHIPGTHEGGADGMDFDEDNNLLV-ANWG-------SSHIEVFGPD------GGQPKMRIRC 265 (314)
T ss_dssp TEEEE---------EEEEEECCCCSSCEEEEEEEBTTCCEEE-EEET-------TTEEEEECTT------CBSCSEEEEC
T ss_pred Ccccc---------ceEEEECCCCCCCCCCceEECCCCCEEE-EEcC-------CCEEEEEcCC------CCcEeEEEeC
Confidence 21100 11222333443 5678899999886544 3322 3789999987 3444444444
Q ss_pred ccceEEEeeeCC
Q 021657 298 FKAHVISCTSKP 309 (309)
Q Consensus 298 h~~~v~~~~~~P 309 (309)
+...+.+++|+|
T Consensus 266 ~~~~~~~i~~~~ 277 (314)
T 1pjx_A 266 PFEKPSNLHFKP 277 (314)
T ss_dssp SSSCEEEEEECT
T ss_pred CCCCceeEEECC
Confidence 546677777754
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=4.7e-13 Score=103.41 Aligned_cols=182 Identities=9% Similarity=0.024 Sum_probs=128.4
Q ss_pred CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc-CCeEEEE
Q 021657 20 TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE-DTVEDVT 98 (309)
Q Consensus 20 ~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~ 98 (309)
.+++|++++.|+.|.+||.+++.. +..+..+. ..+.++.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~----------------------------------------~w~~~~~~~~~~~~~~ 43 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI----------------------------------------VWEYPLEKGWECNSVA 43 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE----------------------------------------EEEEECCTTCCCCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE----------------------------------------EEEeCCCccCCCcCeE
Confidence 467899999999999999875432 33333333 4678899
Q ss_pred EecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc-CCceeEEEeccCCCCeEEEEcC-CCcEEEEecCCCCCCCCCC
Q 021657 99 FCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH-DADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSNGVGS 176 (309)
Q Consensus 99 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~ 176 (309)
+.|+| ++++ +.++.|..||. +++ .+..+..+ ...+.++.+.| +++++++.+. ++.|..+|. + ++
T Consensus 44 ~~pdG-~ilv--s~~~~V~~~d~-~G~--~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~------Gk 109 (276)
T 3no2_A 44 ATKAG-EILF--SYSKGAKMITR-DGR--ELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNM-K------GE 109 (276)
T ss_dssp ECTTS-CEEE--ECBSEEEEECT-TSC--EEEEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT-T------SC
T ss_pred ECCCC-CEEE--eCCCCEEEECC-CCC--EEEEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeC-C------CC
Confidence 99998 7777 35778999998 677 55555544 35788999999 9999999877 777777775 3 67
Q ss_pred ceeeecc------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 177 PINKFEG------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 177 ~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
.+.++.. +......+++.++|.. +++...++.|..||.. ++ .+..+... ....++.
T Consensus 110 ~l~~~~~~~~~~~~~~~~~~v~~~~~G~~-lv~~~~~~~v~~~d~~--G~--------------~~w~~~~~-~~~~~~~ 171 (276)
T 3no2_A 110 VLSKTEFETGIERPHAQFRQINKNKKGNY-LVPLFATSEVREIAPN--GQ--------------LLNSVKLS-GTPFSSA 171 (276)
T ss_dssp EEEEEEECCSCSSGGGSCSCCEECTTSCE-EEEETTTTEEEEECTT--SC--------------EEEEEECS-SCCCEEE
T ss_pred EEEEEeccCCCCcccccccCceECCCCCE-EEEecCCCEEEEECCC--CC--------------EEEEEECC-CCcccee
Confidence 6666642 1124556788999995 5688889999999976 33 23344332 3456677
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+++..++ ++ ..++.|..+|..
T Consensus 172 ~~~~g~~~v-~~-------~~~~~v~~~d~~ 194 (276)
T 3no2_A 172 FLDNGDCLV-AC-------GDAHCFVQLNLE 194 (276)
T ss_dssp ECTTSCEEE-EC-------BTTSEEEEECTT
T ss_pred EcCCCCEEE-Ee-------CCCCeEEEEeCc
Confidence 888777655 33 333788888877
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.55 E-value=6.2e-13 Score=107.03 Aligned_cols=216 Identities=9% Similarity=0.084 Sum_probs=128.5
Q ss_pred eEEEEECCCCCEEEEecC--CCcEEEEeCCccccccc-cCCccc----cccCCCCceeecCCCCCCCCcccCCCCC-cCc
Q 021657 12 EFALAMCPTEPYVLSGGK--DKSVVLWSIQDHITSSA-TDPATA----KSAGSSGSIIKQSPKPGDGNDKAADGPS-VGP 83 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~--dg~i~vwd~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 83 (309)
...++|+|||++|+++.. +++|.+||+++...... ...... ..+....... ....++.+..++... .+.
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~---~~~~dg~~~~v~~~~~g~~ 186 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFM---TICGDGGLLTINLGEDGKV 186 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEE---EEETTSSEEEEEECTTSSE
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEE---EECCCCcEEEEEECCCCcE
Confidence 357899999999998864 68999999988744322 111000 0111111111 111122222222221 111
Q ss_pred c------cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc----------CCceeEEEeccC
Q 021657 84 R------GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH----------DADLHCVDWNPL 147 (309)
Q Consensus 84 ~------~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~~v~~~~~~~~ 147 (309)
. ..+.....++ .+.+.+++ ..++..+.++.|.++|+..........+... ......++++|
T Consensus 187 ~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~- 263 (361)
T 2oiz_A 187 ASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR- 263 (361)
T ss_dssp EEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-
T ss_pred eeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-
Confidence 1 1122222222 23346666 4455566889999999976553222221110 11122378999
Q ss_pred CCCeEEEEcC-----------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 148 DDNLILTGSA-----------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 148 ~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
+++.++++.. .+.|.+||+.+ .+.+.++..+. +..++|+|+|++|+ +++. +.|.+||..
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t------~~~v~~i~~~~--p~~ia~spdg~~l~-v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT------KQRVARIPGRD--ALSMTIDQQRNLML-TLDG-GNVNVYDIS 333 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTT------TEEEEEEECTT--CCEEEEETTTTEEE-EECS-SCEEEEECS
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCC------CcEEEEEecCC--eeEEEECCCCCEEE-EeCC-CeEEEEECC
Confidence 7676665532 34899999999 88899988766 89999999999765 5555 999999998
Q ss_pred cccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 256 (309)
+ ++ .+.+..+..+......++++|+|.
T Consensus 334 t-~~------------l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 334 Q-PE------------PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp S-SS------------CEEEEEETTSCSSEEEEEECCCSC
T ss_pred C-Cc------------ceeeEEeccCCCCcEEEEecCCCC
Confidence 7 10 034455555667778899999875
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=1.7e-12 Score=103.13 Aligned_cols=205 Identities=8% Similarity=-0.028 Sum_probs=131.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
....++++++++++++...++.|.+||..+......... ....+.
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-----------------------------------g~~~~~ 129 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-----------------------------------PDMDME 129 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-----------------------------------TTCCTT
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-----------------------------------CCcccc
Confidence 457899988885555555899999999876422211100 000011
Q ss_pred cCCeEEEEEecCCCcEEEEEc-CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC----------C
Q 021657 91 EDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD----------N 159 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------g 159 (309)
......+++ ..+ .++++.. .++.|.++|+.+++ ....+.. ......++++| ++++++++..+ +
T Consensus 130 ~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~--~~~~i~~-g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 130 SGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDK--VVDELTI-GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp TCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTE--EEEEEEC-SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCC
T ss_pred CCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCe--EEEEEEc-CCCccceEEcC-CCCEEEEECCCccCCccccCCc
Confidence 113445666 333 6566654 48899999998877 4444433 33457899999 88877776654 7
Q ss_pred cEEEEecCCCCCCCCCCceeeeccC-CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGH-SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.|.++|..+ ++....+... ......++++|+++.++++.+ .|.+||..+. +... ..+
T Consensus 204 ~v~~id~~t------~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~-~~~~----------~~~-- 261 (328)
T 3dsm_A 204 SLYRIDAET------FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEAD-RVPV----------RPF-- 261 (328)
T ss_dssp EEEEEETTT------TEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCS-SCCS----------SCS--
T ss_pred eEEEEECCC------CeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCC-ceee----------eee--
Confidence 899999988 6666666432 236789999999998765432 8999998762 2110 000
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..........++++|++..++++...| -..++.|.+||..
T Consensus 262 ~~~~~~~p~gi~vdp~~g~lyva~~~~---y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 262 LEFRDTKYYGLTVNPNNGEVYVADAID---YQQQGIVYRYSPQ 301 (328)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEECTT---SSSEEEEEEECTT
T ss_pred ecCCCCceEEEEEcCCCCeEEEEcccc---cccCCEEEEECCC
Confidence 111245678999999777788765110 0223899999986
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.54 E-value=3.4e-12 Score=112.09 Aligned_cols=205 Identities=7% Similarity=-0.071 Sum_probs=133.3
Q ss_pred eEEEEECCCCCEEEEecCCCc----------------EEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKS----------------VVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKA 75 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~----------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (309)
+..++|+|||+.|+.++.++. |++|++.++...
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~------------------------------- 221 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE------------------------------- 221 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG-------------------------------
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc-------------------------------
Confidence 457899999999998887765 888887643110
Q ss_pred CCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcC-----CCeEEEEEcCC------CCcceEEEeeccCCceeEEEe
Q 021657 76 ADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-----DSCLILWDARV------GTSPVIKVEKAHDADLHCVDW 144 (309)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~ 144 (309)
...+.....|...+..+.|+|+| ++|+.++. +..|.+||+.+ +.. ....+..+...+.. .|
T Consensus 222 -----~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~ 293 (710)
T 2xdw_A 222 -----DILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YV 293 (710)
T ss_dssp -----CEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EE
T ss_pred -----ceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EE
Confidence 00111112245567889999999 55554443 57899999976 421 13334455555544 47
Q ss_pred ccCCCCeEEEEcCC----CcEEEEecCCCCCCCCCC--ceeeeccCCC--CeeEEEEecCCCcEEEEecCCCcE--EEEe
Q 021657 145 NPLDDNLILTGSAD----NSVRMFDRRNLTSNGVGS--PINKFEGHSA--AVLCVQWSPDKSSVFGSSAEDGLL--NIWD 214 (309)
Q Consensus 145 ~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~dg~i--~iwd 214 (309)
+| ++..|+..+.. +.|.+||+.+ +. ....+..+.. .+..++|++++. ++++...|+.. .+|+
T Consensus 294 s~-dg~~l~~~s~~~~~~~~l~~~d~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 294 TN-EGTVFTFKTNRHSPNYRLINIDFTD------PEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp EE-ETTEEEEEECTTCTTCEEEEEETTS------CCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEE
T ss_pred ec-cCCEEEEEECCCCCCCEEEEEeCCC------CCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEE
Confidence 88 77766655443 3699999887 33 2344444433 578899986555 67788888854 5556
Q ss_pred CCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+.. + .....+..+...+..+.++|++..++++.+ +....+.|++||+..
T Consensus 366 ~~~-g--------------~~~~~l~~~~~~v~~~~~s~d~~~l~~~~s----s~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 366 LAT-G--------------ALLKIFPLEVGSVVGYSGQKKDTEIFYQFT----SFLSPGIIYHCDLTK 414 (710)
T ss_dssp TTT-C--------------CEEEEECCCSSEEEEEECCTTCSEEEEEEE----CSSCCCEEEEEETTS
T ss_pred CCC-C--------------CEEEecCCCCceEEEEecCCCCCEEEEEEe----CCCCCCEEEEEECCC
Confidence 533 1 123344556678889999998888777665 445678999999874
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=7.9e-12 Score=105.87 Aligned_cols=207 Identities=9% Similarity=0.036 Sum_probs=134.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+..+.|+|||+++++++.|+.|.+||+... +.+.+..+...
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~--------------------------------------t~~~v~~i~~G 239 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMK--------------------------------------EPTTVAEIKIG 239 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSS--------------------------------------SCCEEEEEECC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCC--------------------------------------CCcEeEEEecC
Confidence 4578999999999999999999999998410 11122223222
Q ss_pred cCCeEEEEEe----cCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec----------cCC-ceeEEEeccCCCCeEEEE
Q 021657 91 EDTVEDVTFC----PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA----------HDA-DLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 91 ~~~v~~~~~~----~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~~l~~~ 155 (309)
.....++|+ |+|+..+++...++.|.++|..+.+ .+..+.. |.. .+..+..++....+++..
T Consensus 240 -~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~--~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 240 -SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE--PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC--EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc--EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 235789999 6985556666677999999988877 4444321 112 577888888444566666
Q ss_pred cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 156 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 156 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
..+|.|.++|..... ...+..+. .......+.|+|++++++++...++.|.++|+.+. +... .
T Consensus 317 ~~~g~v~~vd~~~~~----~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-kl~~-----------~ 379 (567)
T 1qks_A 317 KETGKILLVDYTDLN----NLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-KLVA-----------I 379 (567)
T ss_dssp TTTTEEEEEETTCSS----EEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEE-----------E
T ss_pred cCCCeEEEEecCCCc----cceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCC-cEEE-----------E
Confidence 678999999987621 11222332 34457789999999998888878899999999872 2211 1
Q ss_pred eee--ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 236 FFQ--HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 236 ~~~--~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+-. ...|...-..+ ++|++..++++.. -.++.|.++|...
T Consensus 380 i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~------~g~~~Vsvid~~~ 421 (567)
T 1qks_A 380 EDTGGQTPHPGRGANF-VHPTFGPVWATSH------MGDDSVALIGTDP 421 (567)
T ss_dssp EECSSSSBCCTTCEEE-EETTTEEEEEEEB------SSSSEEEEEECCT
T ss_pred EeccCcCCCCccceee-ECCCCCcEEEeCC------CCCCeEEEecCCC
Confidence 100 11232211222 5787666665432 1237999999984
No 192
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.53 E-value=3.8e-12 Score=99.12 Aligned_cols=152 Identities=16% Similarity=0.241 Sum_probs=113.5
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccc--c
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY--N 88 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 88 (309)
.+.+++++|+|+++++...++.|.+||..... +..+ .
T Consensus 122 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-----------------------------------------~~~~~~~ 160 (286)
T 1q7f_A 122 HPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV-----------------------------------------LHKFGCS 160 (286)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTSCE-----------------------------------------EEEEECT
T ss_pred CceEEEEeCCCCEEEEECCCCEEEEEcCCCCE-----------------------------------------EEEeCCC
Confidence 57899999999988888889999999965311 1111 1
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc--CCceeEEEeccCCCCeEEEEcCCC-cEEEEe
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH--DADLHCVDWNPLDDNLILTGSADN-SVRMFD 165 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg-~i~i~d 165 (309)
.+...+..+++++++ .++++...++.|++||.. ++ ....+..+ ...+..+++++ +++++++...++ .|.+||
T Consensus 161 ~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~--~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 161 KHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYE-GQ--YLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp TTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETT-CC--EEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEEC
T ss_pred CccCCcEEEEECCCC-CEEEEECCCCEEEEEcCC-CC--EEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEEC
Confidence 233468899999998 788888889999999974 44 34444332 35788999999 888888887776 999999
Q ss_pred cCCCCCCCCCCceeeeccCC--CCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 166 RRNLTSNGVGSPINKFEGHS--AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.. ++.+..+..+. ..+..++++|+|+ ++++ +.|+.|++|++..
T Consensus 236 ~~-------g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 236 QD-------GQLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp TT-------SCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSC
T ss_pred CC-------CCEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEccc
Confidence 54 56666665443 3477999999997 5656 5689999999865
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=5.5e-12 Score=106.80 Aligned_cols=191 Identities=11% Similarity=0.105 Sum_probs=137.1
Q ss_pred CCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEE
Q 021657 19 PTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVT 98 (309)
Q Consensus 19 ~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 98 (309)
|.+.++++...+++|.++|..++ +.+..+. ....+..+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~----------------------------------------~v~~~i~-~g~~p~~v~ 203 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY----------------------------------------EIKTVLD-TGYAVHISR 203 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC----------------------------------------CEEEEEE-CSSCEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCC----------------------------------------eEEEEEe-CCCCccceE
Confidence 44556778888999999998753 2222332 223466899
Q ss_pred EecCCCcEEEEEcCCCeEEEEEcC--CCCcceEEEeeccCCceeEEEec----cCCCCeEEEEcC-CCcEEEEecCCCCC
Q 021657 99 FCPSSAQEFCSVGDDSCLILWDAR--VGTSPVIKVEKAHDADLHCVDWN----PLDDNLILTGSA-DNSVRMFDRRNLTS 171 (309)
Q Consensus 99 ~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~-dg~i~i~d~~~~~~ 171 (309)
|+|++ +++++++.|+.|.+||+. +.+ ....+.. ......++|+ | ++++++++.. ++.|.++|..+
T Consensus 204 ~SpDG-r~lyv~~~dg~V~viD~~~~t~~--~v~~i~~-G~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t--- 275 (567)
T 1qks_A 204 LSASG-RYLFVIGRDGKVNMIDLWMKEPT--TVAEIKI-GSEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGET--- 275 (567)
T ss_dssp ECTTS-CEEEEEETTSEEEEEETTSSSCC--EEEEEEC-CSEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTT---
T ss_pred ECCCC-CEEEEEcCCCeEEEEECCCCCCc--EeEEEec-CCCCceeEEccccCC-CCCEEEEEEccCCeEEEEECCC---
Confidence 99999 677788899999999996 555 4555544 3346799999 7 8887776655 69999999988
Q ss_pred CCCCCceeeeccC-----------CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 172 NGVGSPINKFEGH-----------SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 172 ~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
.+++..+... ...+..+..++++..+++....+|.|.++|....... .+.. .
T Consensus 276 ---~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~-------------~v~~-i 338 (567)
T 1qks_A 276 ---LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL-------------KTTE-I 338 (567)
T ss_dssp ---CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE-------------EEEE-E
T ss_pred ---CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc-------------eeee-e
Confidence 7777766421 1257788899988877777788899999998762211 1111 1
Q ss_pred CCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 241 GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 241 ~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.......++.|+|++.+++++...+ +.|.++|+..
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~s-------n~V~ViD~~t 373 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANAR-------NKLVVIDTKE 373 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGGG-------TEEEEEETTT
T ss_pred eccccccCceECCCCCEEEEEeCCC-------CeEEEEECCC
Confidence 2234567889999999988876555 7999999984
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.53 E-value=2.6e-12 Score=113.31 Aligned_cols=243 Identities=9% Similarity=-0.017 Sum_probs=144.4
Q ss_pred ceEEEEECCCCCEEEEecCC-----CcEEEEeCCccccccccCC-c--cccccCCCCceeecCCCCC-----------CC
Q 021657 11 AEFALAMCPTEPYVLSGGKD-----KSVVLWSIQDHITSSATDP-A--TAKSAGSSGSIIKQSPKPG-----------DG 71 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~d-----g~i~vwd~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~-----------~~ 71 (309)
.+..++|||||++|+.++.+ ..|++||++++........ . ..........+........ ..
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCC
Confidence 67899999999999876543 4699999998754322111 0 1111122222222221111 23
Q ss_pred CcccCCCCCcCc--ccccc--cccCCeEEEEEecCCCcEEEEEcCC-----CeEEEEEcCCCCcceEEEeeccCCceeEE
Q 021657 72 NDKAADGPSVGP--RGIYN--GHEDTVEDVTFCPSSAQEFCSVGDD-----SCLILWDARVGTSPVIKVEKAHDADLHCV 142 (309)
Q Consensus 72 ~~~~~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 142 (309)
.+++++..+... ...+. .+...+..+.|+|+| ++|+..+.+ ..|.+||+.++.......+..+...+...
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 466666655432 12222 233458899999999 555555433 48999999876211123333444444444
Q ss_pred EeccCCCCeEEEEcCC----CcEEEEecCCCCCCCCC-Cceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC
Q 021657 143 DWNPLDDNLILTGSAD----NSVRMFDRRNLTSNGVG-SPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 143 ~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~ 216 (309)
. +| +++.|+..+.+ +.|.+||+.+ + ..... +..+...+..+++. +..++++...|+..+||.+.
T Consensus 323 ~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~------~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 323 V-DG-VGDQLWFVSGDGAPLKKIVRVDLSG------STPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp E-EE-ETTEEEEEECTTCTTCEEEEEECSS------SSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEE
T ss_pred E-ec-cCCEEEEEECCCCCCCEEEEEeCCC------CccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 3 47 77777766653 4599999876 3 12223 33344456677776 44577888889988888765
Q ss_pred cccccccCCCCCcCCCCceeeeecC-CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 217 KVGKKVEQGPRTTNYPAGLFFQHAG-HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
..+. ....+.. +...+..+.++|+++.++++.+ +....++|++||+..
T Consensus 393 ~~g~--------------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s----s~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 393 LDGK--------------PAGAVSLPGIGSASGLSGRPGDRHAYLSFS----SFTQPATVLALDPAT 441 (741)
T ss_dssp TTSC--------------EEEECBCSSSCEEEEEECCBTCSCEEEEEE----ETTEEEEEEEEETTT
T ss_pred CCCC--------------ceeeccCCCCeEEEEeecCCCCCEEEEEEc----CCCCCCEEEEEECCC
Confidence 3222 1222222 3567889999998887776654 445568999999873
No 195
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=1.9e-12 Score=103.64 Aligned_cols=130 Identities=14% Similarity=0.095 Sum_probs=100.2
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
|+.|+| ++.+|+++ .++.|++||+.+.. .......|.
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~----------------------------------------~~~~~~~~~ 126 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELS----------------------------------------EFRTVTSFE 126 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTT----------------------------------------CEEEEEECS
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhh----------------------------------------ccCccceee
Confidence 899999 99999999 88999999997531 112234456
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..+.++.+.+. . +++++.||.|.+||+.++. ... +...|+|++|+| .| ++.|..||.+++|+...
T Consensus 127 ~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~--~~~----~~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~--- 191 (388)
T 1xip_A 127 KPVFQLKNVNN--T-LVILNSVNDLSALDLRTKS--TKQ----LAQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRN--- 191 (388)
T ss_dssp SCEEEEEECSS--E-EEEEETTSEEEEEETTTCC--EEE----EEESEEEEEECS-SE--EEEEETTSCEEEEEEET---
T ss_pred cceeeEEecCC--C-EEEEECCCCEEEEEccCCc--ccc----ccCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCC---
Confidence 67888777654 3 8888999999999998776 222 345899999999 77 78899999999998876
Q ss_pred CCCCCc--eeee------c---cCCCCeeEEEEecCCCcEEE
Q 021657 172 NGVGSP--INKF------E---GHSAAVLCVQWSPDKSSVFG 202 (309)
Q Consensus 172 ~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~ 202 (309)
... ..++ . +|...|.+|.|.+++.++++
T Consensus 192 ---~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 192 ---GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ---TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ---ccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 443 4445 2 36788999999999987553
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.51 E-value=1.8e-11 Score=96.57 Aligned_cols=203 Identities=5% Similarity=0.057 Sum_probs=129.9
Q ss_pred CCCcceEEEEECCC-CCEEEEecCCCcEEEEeCCccccccc-cCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcc
Q 021657 7 HQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSA-TDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 84 (309)
Q Consensus 7 H~~~~V~~~~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (309)
+.. .+.+++++++ ++++++.. .+.|.+||.+ +..... ...
T Consensus 69 ~~~-~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~----------------------------------- 110 (314)
T 1pjx_A 69 YGG-IPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKD----------------------------------- 110 (314)
T ss_dssp EEC-CEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBC-----------------------------------
T ss_pred CCC-CCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEecc-----------------------------------
Confidence 444 5789999999 76555544 4478889876 321100 000
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCC---------------CeEEEEEcCCCCcceEEEeeccCCceeEEEec----
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDD---------------SCLILWDARVGTSPVIKVEKAHDADLHCVDWN---- 145 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~---- 145 (309)
........+.++++.++| +++++...+ +.|..||.. ++ ... ...+......++|+
T Consensus 111 -~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~-~~~~~~~~~~i~~~~~~d 184 (314)
T 1pjx_A 111 -SEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQ-VDTAFQFPNGIAVRHMND 184 (314)
T ss_dssp -TTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEE-EEEEESSEEEEEEEECTT
T ss_pred -CCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CC--EEE-eccCCCCcceEEEecccC
Confidence 000122457889999998 666666544 567777765 44 222 22333456889999
Q ss_pred cCCCCeE-EEEcCCCcEEEEecCCCCCCCCCC-----ceeeeccCC-CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 146 PLDDNLI-LTGSADNSVRMFDRRNLTSNGVGS-----PINKFEGHS-AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 146 ~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
| +++.+ ++...++.|.+||+... ++ ....+..+. ..+..++++++|. ++++...++.|.+||.++
T Consensus 185 ~-dg~~l~v~~~~~~~i~~~~~~~~-----g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~- 256 (314)
T 1pjx_A 185 G-RPYQLIVAETPTKKLWSYDIKGP-----AKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDG- 256 (314)
T ss_dssp S-CEEEEEEEETTTTEEEEEEEEET-----TEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTC-
T ss_pred C-CCCEEEEEECCCCeEEEEECCCC-----CccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCC-
Confidence 9 77654 45566889999998621 22 223333333 5678899999997 566666688999999874
Q ss_pred cccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 219 GKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+ ..+..+..+...+.+++++|++..++++...+ +.|..|++..
T Consensus 257 g--------------~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~-------~~l~~~~~~~ 299 (314)
T 1pjx_A 257 G--------------QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHEN-------NAVWKFEWQR 299 (314)
T ss_dssp B--------------SCSEEEECSSSCEEEEEECTTSSEEEEEETTT-------TEEEEEECSS
T ss_pred C--------------cEeEEEeCCCCCceeEEECCCCCEEEEEeCCC-------CeEEEEeCCC
Confidence 1 11223334556789999999988777765544 7999999873
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=3.7e-11 Score=98.17 Aligned_cols=248 Identities=10% Similarity=0.030 Sum_probs=140.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCC---ccccccCCCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP---ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
....|+|+++++++++...++.|++||.+++........ .. ...........+........+..++.........+
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence 467999999999888888889999999986532211111 11 11111111122221111113444443332222222
Q ss_pred ----ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE--eeccCCce--eEEEeccCCCCeEEEEcCCC
Q 021657 88 ----NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV--EKAHDADL--HCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 88 ----~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v--~~~~~~~~~~~~l~~~~~dg 159 (309)
......+.+++++|+++.+++ +..++.|+.||..++....... ..+....- ..++|+|.++.++++-..++
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 213456788999995435554 6778999999998766211110 12222222 39999994466677777788
Q ss_pred cEEEEecCCCCCCCCCCceeeeccC---------------CCCeeEEEEecCCCcEEEEec-CCCcEEEEeCCccccccc
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGH---------------SAAVLCVQWSPDKSSVFGSSA-EDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~-~dg~i~iwd~~~~~~~~~ 223 (309)
.|+.||... . +..+.++ -.....++++++|. ++++-. .++.|+.|++.. +....
T Consensus 290 ~I~~~~~~g-------~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~-G~v~~ 359 (409)
T 3hrp_A 290 SVYKITPDG-------E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILD-GYVST 359 (409)
T ss_dssp EEEEECTTC-------C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTT-TEEEE
T ss_pred EEEEEecCC-------C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCC-CEEEE
Confidence 999998764 2 2223222 13478999999998 677877 899999999654 22111
Q ss_pred CCCC--CcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 224 QGPR--TTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 224 ~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
.... ....... ......-.....++++|++ .++++-..+ +.|+.+++
T Consensus 360 ~~g~~~~~g~~~g--~~~~~~~~~P~giavd~~g-~lyVad~~n-------~~Ir~i~~ 408 (409)
T 3hrp_A 360 VAGQVDVASQIDG--TPLEATFNYPYDICYDGEG-GYWIAEAWG-------KAIRKYAV 408 (409)
T ss_dssp EEECTTCBSCCCB--STTTCCBSSEEEEEECSSS-EEEEEESTT-------CEEEEEEE
T ss_pred EeCCCCCCCcCCC--ChhceEeCCceEEEEcCCC-CEEEEECCC-------CeEEEEEe
Confidence 0000 0000000 0001112457899999984 566655444 78887765
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=1.3e-11 Score=97.98 Aligned_cols=192 Identities=7% Similarity=-0.030 Sum_probs=130.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
....+.++ +++++++...++.|.+||.++. +.+..+. .
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~----------------------------------------~~~~~i~-~ 82 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTF----------------------------------------KEVGRIT-G 82 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTC----------------------------------------CEEEEEE-C
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECccc----------------------------------------EEEEEcC-C
Confidence 35677774 3555666677899999998753 2223332 2
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC-----CceeEEEeccCCCCeEEEEc-CCCcEEEE
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD-----ADLHCVDWNPLDDNLILTGS-ADNSVRMF 164 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~-~dg~i~i~ 164 (309)
......+++++++ .++++...++.|.+||..+++ ....+.... .....+++ . ++..+++.. .++.|.++
T Consensus 83 ~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~--~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~vi 157 (328)
T 3dsm_A 83 FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYE--ITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKI 157 (328)
T ss_dssp CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTE--EEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEE
T ss_pred CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCe--EEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEE
Confidence 3567889999988 766666588999999998877 444433222 14567777 4 566666654 48899999
Q ss_pred ecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC----------CcEEEEeCCcccccccCCCCCcCCCCc
Q 021657 165 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED----------GLLNIWDYEKVGKKVEQGPRTTNYPAG 234 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (309)
|+.+ ++.+.++... .....++++|+|+ +++++..+ +.|.++|..+. +
T Consensus 158 D~~t------~~~~~~i~~g-~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------------~ 214 (328)
T 3dsm_A 158 DTET------DKVVDELTIG-IQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETF---------------T 214 (328)
T ss_dssp ETTT------TEEEEEEECS-SCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTT---------------E
T ss_pred ECCC------CeEEEEEEcC-CCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCC---------------e
Confidence 9998 7777777643 3457899999998 45565544 78999998761 1
Q ss_pred eeeeecCC-CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 235 LFFQHAGH-RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 235 ~~~~~~~~-~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
....+... ......++++|++..++++. +.|.+||...
T Consensus 215 v~~~~~~~~g~~p~~la~~~d~~~lyv~~----------~~v~~~d~~t 253 (328)
T 3dsm_A 215 VEKQFKFKLGDWPSEVQLNGTRDTLYWIN----------NDIWRMPVEA 253 (328)
T ss_dssp EEEEEECCTTCCCEEEEECTTSCEEEEES----------SSEEEEETTC
T ss_pred EEEEEecCCCCCceeEEEecCCCEEEEEc----------cEEEEEECCC
Confidence 22222211 23678999999998887642 2789999873
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.49 E-value=3.9e-12 Score=111.23 Aligned_cols=205 Identities=12% Similarity=0.108 Sum_probs=128.4
Q ss_pred CCCCcceEEEEECCCCCEEEE-----ecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 6 GHQDNAEFALAMCPTEPYVLS-----GGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t-----~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+|.. .+..++|||||++||- |+.+..|++||++++....
T Consensus 126 ~~~~-~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~----------------------------------- 169 (693)
T 3iuj_A 126 DGTT-ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLE----------------------------------- 169 (693)
T ss_dssp TSCC-EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEE-----------------------------------
T ss_pred CCcE-EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCc-----------------------------------
Confidence 4555 7889999999999883 3444679999998642110
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEcCCC-------------eEEEEEcCCCCcceEEEee--c-cCCceeEEEe
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS-------------CLILWDARVGTSPVIKVEK--A-HDADLHCVDW 144 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-------------~i~iwd~~~~~~~~~~~~~--~-~~~~v~~~~~ 144 (309)
..+.. .....++|+ |+ +.|+.++.+. .|++|++.+........+. . +......+.|
T Consensus 170 ----~~~~~--~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~ 241 (693)
T 3iuj_A 170 ----TPLKD--VKFSGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATV 241 (693)
T ss_dssp ----EEEEE--EESCCCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEE
T ss_pred ----cccCC--ceeccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEE
Confidence 01111 112467899 88 4555555553 4999999876532233332 2 3445788999
Q ss_pred ccCCCCeEEEEcC----CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC---CcEEEEeCCc
Q 021657 145 NPLDDNLILTGSA----DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED---GLLNIWDYEK 217 (309)
Q Consensus 145 ~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d---g~i~iwd~~~ 217 (309)
+| ++++|+.... ++.|+++|+.+. ......+..+....... ++++|..+++....+ +.|..+|+..
T Consensus 242 Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~-----~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 242 TE-DDRFLLISAANSTSGNRLYVKDLSQE-----NAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp CT-TSCEEEEEEESSSSCCEEEEEETTST-----TCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred cC-CCCEEEEEEccCCCCcEEEEEECCCC-----CCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 99 8887755432 358999999873 12344555555555554 777777777666554 6788888876
Q ss_pred ccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 218 VGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.... ....+..|...+. .|++++.+++++...+ .-..|++|++.
T Consensus 315 ~~~~-------------~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~-----g~~~l~~~d~~ 358 (693)
T 3iuj_A 315 PGPA-------------HWRDLIPERQQVL--TVHSGSGYLFAEYMVD-----ATARVEQFDYE 358 (693)
T ss_dssp CCGG-------------GCEEEECCCSSCE--EEEEETTEEEEEEEET-----TEEEEEEECTT
T ss_pred CCcc-------------ccEEEecCCCCEE--EEEEECCEEEEEEEEC-----CeeEEEEEECC
Confidence 2210 1123344554454 8899899888766554 11267888876
No 200
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.48 E-value=6.4e-12 Score=100.62 Aligned_cols=142 Identities=14% Similarity=0.121 Sum_probs=89.9
Q ss_pred CeEEEEEecCCCcEEEEEcCCC-------eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-------
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDS-------CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD------- 158 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------- 158 (309)
.+..+.|+|+| +++++..++ ...||.+.+++ ...+..+ ..+..+ +| +++.|+.++.+
T Consensus 172 ~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~---~~~l~~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~ 242 (347)
T 2gop_A 172 RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGK---EEKMFEK-VSFYAV--DS-DGERILLYGKPEKKYMSE 242 (347)
T ss_dssp TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTE---EEEEEEE-ESEEEE--EE-CSSCEEEEECCSSSCCCS
T ss_pred CcccccCCCCe--EEEEEecccccccccccccEEEeCCCc---eEEeccC-cceeeE--CC-CCCEEEEEEccccCCccc
Confidence 67889999998 666665442 34455444333 2333333 444444 89 88888777644
Q ss_pred -CcEEEEecCCCCCCCCCCceeeeccCCCCeeE-EEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 159 -NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLC-VQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 159 -g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
..|.+|| + ++.......+...+.. +.|+ ++ ++++++.++.++|| +.. ++.
T Consensus 243 ~~~l~~~d--~------~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~-g~~--------------- 294 (347)
T 2gop_A 243 HNKLYIYD--G------KEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWD-GEI--------------- 294 (347)
T ss_dssp SCEEEEEC--S------SCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EES-SSE---------------
T ss_pred cceEEEEC--C------CceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcC-Cce---------------
Confidence 3688888 4 5554444555677876 8999 77 57788889999999 873 321
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeE-EEEEcc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTL-QIWRMS 281 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v-~vw~~~ 281 (309)
..+..+...|.+++|+| . ++++++.+ +.. .+|.+.
T Consensus 295 ~~~~~~~~~v~~~~~s~--~-~~~~~~~~-------~~~~~l~~~~ 330 (347)
T 2gop_A 295 KPIAKGRHWIMGFDVDE--I-VVYLKETA-------TRLRELFTWD 330 (347)
T ss_dssp EEEECSSSEEEEEEESS--S-EEEEEECS-------SSCCEEEEES
T ss_pred EEEecCCCeEEeeeeeC--c-EEEEEcCC-------CChHHheEeC
Confidence 12233467899999999 4 44444433 343 677664
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.47 E-value=1.9e-11 Score=94.24 Aligned_cols=156 Identities=4% Similarity=-0.076 Sum_probs=107.4
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..+.++++.+++ .++++.. ++.|.+||..... ...........+..++++| +++++++...++.|.+|+..+
T Consensus 67 ~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~--~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~--- 138 (270)
T 1rwi_B 67 YQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNN--QTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGS--- 138 (270)
T ss_dssp CSCCCEEECTTC-CEEEEET-TTEEEEECTTCSC--CEECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTC---
T ss_pred CCcceeEECCCC-CEEEEcC-CCEEEEEeCCCce--EeeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCC---
Confidence 457889999988 6666665 8899999987654 2222222335689999999 888888877889999997655
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 251 (309)
.............+..++++++|+ ++++...++.|.+||...... ......+...+.++++
T Consensus 139 ---~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~---------------~~~~~~~~~~p~~i~~ 199 (270)
T 1rwi_B 139 ---KTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQ---------------VVLPFTDITAPWGIAV 199 (270)
T ss_dssp ---CSCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCE---------------EECCCSSCCSEEEEEE
T ss_pred ---ceeEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCce---------------EeecccCCCCceEEEE
Confidence 333222222334678899999998 676777788999999875211 1111122356789999
Q ss_pred ccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 252 NASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 252 ~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++++ .++++...+ +.|.+|+...
T Consensus 200 d~~g-~l~v~~~~~-------~~v~~~~~~~ 222 (270)
T 1rwi_B 200 DEAG-TVYVTEHNT-------NQVVKLLAGS 222 (270)
T ss_dssp CTTC-CEEEEETTT-------SCEEEECTTC
T ss_pred CCCC-CEEEEECCC-------CcEEEEcCCC
Confidence 9987 455544433 7999999873
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.47 E-value=3.5e-11 Score=95.49 Aligned_cols=216 Identities=11% Similarity=0.059 Sum_probs=134.0
Q ss_pred eEEEEECCCC-CEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 12 EFALAMCPTE-PYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 12 V~~~~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
..+..|+|++ .++++...++.|..||.+++.. ..+ ..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-----------------------------------------~~~-~~ 88 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-----------------------------------------TVH-AL 88 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-----------------------------------------EEE-EC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-----------------------------------------EEE-EC
Confidence 3578899974 4566777789999999874311 111 12
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec---c-CCceeEEEeccCCCCeEEEEcC------CCc
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA---H-DADLHCVDWNPLDDNLILTGSA------DNS 160 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~~l~~~~~------dg~ 160 (309)
...+.++.|.+++ .++++. .+ .|.+||..+++ ....... . ...+..++++| +++++++... .+.
T Consensus 89 ~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~ 162 (326)
T 2ghs_A 89 PFMGSALAKISDS-KQLIAS-DD-GLFLRDTATGV--LTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGS 162 (326)
T ss_dssp SSCEEEEEEEETT-EEEEEE-TT-EEEEEETTTCC--EEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEE
T ss_pred CCcceEEEEeCCC-eEEEEE-CC-CEEEEECCCCc--EEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceE
Confidence 3468999999998 666554 44 49999988777 2222211 1 23588999999 8887665432 244
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCC-ccc-ccccCCCCCcCCCCceeee
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE-KVG-KKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~-~~~-~~~~~~~~~~~~~~~~~~~ 238 (309)
|..+| + ++... +.......+.++|+|+++.++++.+.++.|.+||+. ..+ .... ...+..
T Consensus 163 l~~~~--~------g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~---------~~~~~~ 224 (326)
T 2ghs_A 163 IYHVA--K------GKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK---------AEVFID 224 (326)
T ss_dssp EEEEE--T------TEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC---------CEEEEE
T ss_pred EEEEe--C------CcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC---------ceEEEE
Confidence 55555 3 43322 222234567899999999877777778999999986 212 1100 112222
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhhcccceEEEeeeC
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 308 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 308 (309)
+.........+++++++..+++ ...+ +.|.+|+.. ++.+..+..+...+.+++|.
T Consensus 225 ~~~~~~~p~gi~~d~~G~lwva-~~~~-------~~v~~~d~~-------g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGHIWNA-RWGE-------GAVDRYDTD-------GNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CTTSSSEEEEEEECTTSCEEEE-EETT-------TEEEEECTT-------CCEEEEEECSCSBEEEEEEE
T ss_pred CCCCCCCCCeeEECCCCCEEEE-EeCC-------CEEEEECCC-------CCEEEEEECCCCCcEEEEEe
Confidence 3333455678999998865443 2222 689999874 33344454455567888775
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=6.4e-11 Score=92.61 Aligned_cols=232 Identities=8% Similarity=-0.019 Sum_probs=143.4
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc-ccC----CccccccCCCCceeecCCCCCCCCcccCCCCCcCcc-
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS-ATD----PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR- 84 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (309)
.+.+++++++|.+.++...++.|.+||.. +.... ... ............+... ....+.+..++.. .+..
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFT--ENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEE--ETTTTEEEEECTT-SCEEE
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEE--ecCCCeEEEECCC-CCeEE
Confidence 57899999999988888888999999987 32211 110 0001111111211111 1223445555544 2221
Q ss_pred cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 85 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
..+......+.++++.+++ .++++...++.|..+|.. ++. ...........+..+++++ +++++++...++.|..|
T Consensus 97 ~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTI-YEYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRI 172 (300)
T ss_dssp EECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEE
T ss_pred ecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCE-EEccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEE
Confidence 1122234568999999988 777777778899999986 552 1122223446789999999 88877777768899999
Q ss_pred ecCCCCCCCCCCcee-eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 165 DRRNLTSNGVGSPIN-KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 165 d~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
|. + ++... ........+..+++.+++. ++++...++.|.+||... ... ......+.
T Consensus 173 ~~-~------g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g--~~~-------------~~~~~~~~ 229 (300)
T 2qc5_A 173 TN-T------GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTTG--EIS-------------EYDIPTPN 229 (300)
T ss_dssp CT-T------CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC--CEE-------------EEECSSTT
T ss_pred CC-C------CcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCCC--cEE-------------EEECCCCC
Confidence 98 4 33332 2223345688999999987 666666677899999732 111 11122344
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+.++++++++. ++++... ++.|..|+..
T Consensus 230 ~~~~~i~~d~~g~-l~v~~~~-------~~~i~~~~~~ 259 (300)
T 2qc5_A 230 ARPHAITAGKNSE-IWFTEWG-------ANQIGRITND 259 (300)
T ss_dssp CCEEEEEECSTTC-EEEEETT-------TTEEEEECTT
T ss_pred CCceEEEECCCCC-EEEeccC-------CCeEEEECCC
Confidence 5678999999877 4443332 3788888864
No 204
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.47 E-value=5.3e-12 Score=110.53 Aligned_cols=202 Identities=8% Similarity=-0.114 Sum_probs=131.0
Q ss_pred EEEEECCCCCEEEEecCCCc-------------EEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 13 FALAMCPTEPYVLSGGKDKS-------------VVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
..++|+|||+.|+.++.|.. |++|++.++...
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~----------------------------------- 215 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK----------------------------------- 215 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-----------------------------------
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-----------------------------------
Confidence 57899999999999988776 999998753210
Q ss_pred CcCcccccccccCCeEEEEEecCCCcEEEEEcCCC----eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 80 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS----CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
...+.....+...+..+.|+|+| ++|+.++.++ .|.+|+..+++ ...+..+...+....+ + ++.+++..
T Consensus 216 -~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~~~~-~-~g~l~~~s 288 (695)
T 2bkl_A 216 -DTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKD---FRLLVKGVGAKYEVHA-W-KDRFYVLT 288 (695)
T ss_dssp -CEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSS---CEEEEECSSCCEEEEE-E-TTEEEEEE
T ss_pred -ceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCc---eEEeecCCCceEEEEe-c-CCcEEEEE
Confidence 00112223355678899999999 5555555444 67777654444 2333345555666666 4 45555554
Q ss_pred c---CCCcEEEEecCCCCCCCCCCc--eeeeccC--CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 156 S---ADNSVRMFDRRNLTSNGVGSP--INKFEGH--SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 156 ~---~dg~i~i~d~~~~~~~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
. .++.|.+||+.+ +.. ...+..+ ...+..++|+ ++ .++++...|+..+||.+...+.
T Consensus 289 ~~~~~~~~l~~~d~~~------~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~-------- 352 (695)
T 2bkl_A 289 DEGAPRQRVFEVDPAK------PARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKGK-------- 352 (695)
T ss_dssp CTTCTTCEEEEEBTTB------CSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC--------
T ss_pred CCCCCCCEEEEEeCCC------CCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCC--------
Confidence 4 257899999987 432 2333322 4457888888 44 4778889999988887763222
Q ss_pred cCCCCceeeeecCC-CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 229 TNYPAGLFFQHAGH-RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 229 ~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
....+..+ ...+..++++|++..++++.+ +....+.|++||+..
T Consensus 353 ------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s----s~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 353 ------PVRTVQLPGVGAASNLMGLEDLDDAYYVFT----SFTTPRQIYKTSVST 397 (695)
T ss_dssp ------EEEECCCSSSSEECCCBSCTTCSEEEEEEE----ETTEEEEEEEEETTT
T ss_pred ------eeEEecCCCCeEEEEeecCCCCCEEEEEEc----CCCCCCEEEEEECCC
Confidence 12223333 567888899998888777665 445568999999874
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.46 E-value=5.2e-10 Score=87.36 Aligned_cols=230 Identities=7% Similarity=0.003 Sum_probs=143.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCCCCCcCccc-
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG- 85 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 85 (309)
.+.+++++++|.++++...++.|..||.+......... ............+... ....+.+..++. +.+...
T Consensus 58 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~i~~~d~-~g~~~~~ 134 (299)
T 2z2n_A 58 KVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFT--EMNGNRIGRITD-DGKIREY 134 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEE--ETTTTEEEEECT-TCCEEEE
T ss_pred ceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEE--ecCCceEEEECC-CCCEEEe
Confidence 57899999999988888878999999986332111110 0001111111111111 112344555555 322221
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE-eeccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV-EKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
........+..+++.+++ .++++...++.|..||. +++ .... .......+.++++++ ++.++++...++.|..|
T Consensus 135 ~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~--~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~ 209 (299)
T 2z2n_A 135 ELPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGD--ITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRI 209 (299)
T ss_dssp ECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCC--EEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEE
T ss_pred cCCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCc--EEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEE
Confidence 122344568999999988 77777777889999998 555 2222 233445688999999 88877777778899999
Q ss_pred ecCCCCCCCCCCcee-eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 165 DRRNLTSNGVGSPIN-KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 165 d~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
|. + ++... ........+..++++++|. ++++...++.|..||... .. .......+.
T Consensus 210 ~~-~------g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~g--~~-------------~~~~~~~~~ 266 (299)
T 2z2n_A 210 TT-S------GEITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSNN--II-------------EEYPIQIKS 266 (299)
T ss_dssp CT-T------CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETTT--EE-------------EEEECSSSS
T ss_pred CC-C------CcEEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCCC--ce-------------EEEeCCCCC
Confidence 98 5 44322 1233446788999999998 666666788999999732 11 111123345
Q ss_pred cceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 244 DKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+.++++ +++..++ +.+. +.+..++..
T Consensus 267 ~~~~~i~~-~~g~l~v-~~~~--------~~l~~~~~~ 294 (299)
T 2z2n_A 267 AEPHGICF-DGETIWF-AMEC--------DKIGKLTLI 294 (299)
T ss_dssp CCEEEEEE-CSSCEEE-EETT--------TEEEEEEEC
T ss_pred CccceEEe-cCCCEEE-EecC--------CcEEEEEcC
Confidence 67889999 7666444 3322 577777776
No 206
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=2e-10 Score=88.63 Aligned_cols=178 Identities=10% Similarity=0.072 Sum_probs=120.0
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+.++.++|+|++|++ .++.|+.||. ++ +.+..+..+
T Consensus 38 ~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G----------------------------------------~~~W~~~~~ 74 (276)
T 3no2_A 38 ECNSVAATKAGEILFS--YSKGAKMITR-DG----------------------------------------RELWNIAAP 74 (276)
T ss_dssp CCCEEEECTTSCEEEE--CBSEEEEECT-TS----------------------------------------CEEEEEECC
T ss_pred CCcCeEECCCCCEEEe--CCCCEEEECC-CC----------------------------------------CEEEEEcCC
Confidence 4567778888877773 3566777776 32 222333322
Q ss_pred -cCCeEEEEEecCCCcEEEEEcC-CCeEEEEEcCCCCcceEEEee------ccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 91 -EDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEK------AHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 91 -~~~v~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
...+.++.+.++| +++++.+. ++.|..+|. +++ .+..+. .+......+++.+ +++++++...++.|.
T Consensus 75 ~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk--~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 75 AGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGE--VLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVR 149 (276)
T ss_dssp TTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSC--EEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEE
T ss_pred CCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCC--EEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEE
Confidence 2467888999999 77777666 778888875 555 333332 1222455677888 999999999999999
Q ss_pred EEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
.||.. ++.+.++... ..+.++...++|.. ++++..++.|..+|..+ ++ .+.++..+
T Consensus 150 ~~d~~-------G~~~w~~~~~-~~~~~~~~~~~g~~-~v~~~~~~~v~~~d~~t-G~--------------~~w~~~~~ 205 (276)
T 3no2_A 150 EIAPN-------GQLLNSVKLS-GTPFSSAFLDNGDC-LVACGDAHCFVQLNLES-NR--------------IVRRVNAN 205 (276)
T ss_dssp EECTT-------SCEEEEEECS-SCCCEEEECTTSCE-EEECBTTSEEEEECTTT-CC--------------EEEEEEGG
T ss_pred EECCC-------CCEEEEEECC-CCccceeEcCCCCE-EEEeCCCCeEEEEeCcC-Cc--------------EEEEecCC
Confidence 99975 6778888754 45667888899985 55777788899999886 22 33333221
Q ss_pred ------CcceeeEEEccCCCeEEE
Q 021657 243 ------RDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 243 ------~~~v~~~~~~~~~~~~~~ 260 (309)
...+..+...+++..+++
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~ 229 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYIC 229 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEE
T ss_pred CCCCccccccccceEcCCCCEEEE
Confidence 234778888887775554
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.41 E-value=8.1e-11 Score=92.48 Aligned_cols=194 Identities=11% Similarity=0.025 Sum_probs=123.6
Q ss_pred ceEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 11 AEFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 11 ~V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
......|+|+++ +++++..++.|..|+.... ...+..
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~------------------------------------------~~~~~~ 83 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT------------------------------------------VDVLLD 83 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETTSC------------------------------------------EEEEEE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCCCC------------------------------------------EEEEeC
Confidence 457889999998 6778888999999987421 122233
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec----cCCceeEEEeccCCCCeEEE----EcC----
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA----HDADLHCVDWNPLDDNLILT----GSA---- 157 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~----~~~---- 157 (309)
+...+..++++++| +++++...++.|.+|+.. ++ ....... ....+..++++| +++++++ |..
T Consensus 84 ~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~--~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQ--AHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp SCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SC--EEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGG
T ss_pred CCCccceeeECCCC-CEEEEECCCCEEEEECCC-CC--EEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCcccccc
Confidence 45568899999998 666666666889999975 54 2222111 113467899999 8988886 432
Q ss_pred ---------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC-----CCcEEEEeCCccccccc
Q 021657 158 ---------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-----DGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 158 ---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----dg~i~iwd~~~~~~~~~ 223 (309)
.+.|..||..+ ++..... .....+.++|+|+++.|+++.+. ++.|.+|++...+ ...
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~------g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~ 229 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDG------SPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHD 229 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSS------CCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEE
T ss_pred ccccccccCCCeEEEEcCCC------CcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccC
Confidence 25677777765 4433222 33456889999999977655444 2789999987522 100
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...+.. ........+++++++..++ + . . +.|.+|+..
T Consensus 230 ---------~~~~~~--~~~~~pdgi~~d~~G~lwv-~-------~-~-~gv~~~~~~ 266 (305)
T 3dr2_A 230 ---------RRHFAS--VPDGLPDGFCVDRGGWLWS-S-------S-G-TGVCVFDSD 266 (305)
T ss_dssp ---------EEEEEC--CSSSCCCSEEECTTSCEEE-C-------C-S-SEEEEECTT
T ss_pred ---------CeEEEE--CCCCCCCeEEECCCCCEEE-e-------c-C-CcEEEECCC
Confidence 011111 1233456789999887433 2 1 2 348888875
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.39 E-value=5.4e-10 Score=90.06 Aligned_cols=240 Identities=7% Similarity=-0.035 Sum_probs=141.7
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEeCCccccccccCC-----------ccccccCCCCceeecCCCCCCCC
Q 021657 14 ALAMCPTEPYVLSGG----------KDKSVVLWSIQDHITSSATDP-----------ATAKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~----------~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.++++|||++|+.+. .++.|.+||..+......... .......................
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 889999999988875 367899999987533221111 00111222222222222222456
Q ss_pred cccCCCCCcCcccc-cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-----ccCCc-eeEEEec
Q 021657 73 DKAADGPSVGPRGI-YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-----AHDAD-LHCVDWN 145 (309)
Q Consensus 73 ~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~-v~~~~~~ 145 (309)
+.+++ .+.+.+.. +... . ++.+.|++...+++.+.||.+.++|. +++ ...... ....+ .....+.
T Consensus 150 v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~--~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG--AAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc--EEEEEeccccccCCcceeecceeE
Confidence 77777 77766655 4321 1 24566777677888889999999999 766 221111 11122 1234566
Q ss_pred cCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc----------CCCCeeEEEEecCCCcEEEEec---------C
Q 021657 146 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG----------HSAAVLCVQWSPDKSSVFGSSA---------E 206 (309)
Q Consensus 146 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~---------~ 206 (309)
+ ++..++..+..+.+.+.|+.... ...+..+.. .......++++|+++.++++.. .
T Consensus 222 ~-~~~~~~~~~~~~~v~vid~~~~~----~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~ 296 (373)
T 2mad_H 222 N-KSGRIVWPVYSGKILQADISAAG----ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAA 296 (373)
T ss_pred e-cCCEEEEEcCCceEEEEeccCCc----ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCC
Confidence 6 44444444467899999987521 122222211 1223445789999998776543 2
Q ss_pred CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 207 DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 207 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
++.|.++|+.+ .+.+..+. -......++|+|++.++++++.. .++.|.++|+.
T Consensus 297 ~~~V~VID~~t---------------~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~------~~~~V~ViD~~----- 349 (373)
T 2mad_H 297 AKEVTSVTGLV---------------GQTSSQIS-LGHDVDAISVAQDGGPDLYALSA------GTEVLHIYDAG----- 349 (373)
T ss_pred CCeEEEEECCC---------------CEEEEEEE-CCCCcCeEEECCCCCeEEEEEcC------CCCeEEEEECC-----
Confidence 35799999987 22333332 22357899999999844444331 23899999999
Q ss_pred ChhhHhHh
Q 021657 287 PQDEVLAE 294 (309)
Q Consensus 287 ~~~~~~~~ 294 (309)
+.+.+.+
T Consensus 350 -t~~vv~~ 356 (373)
T 2mad_H 350 -AGDQDQS 356 (373)
T ss_pred -CCCEEee
Confidence 5665555
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=3.3e-10 Score=88.64 Aligned_cols=192 Identities=14% Similarity=0.081 Sum_probs=120.9
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.+.+++++|+|+++++. ++.|.+||.+++........ . ....
T Consensus 55 ~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~-----------------------------~-------~~~~ 96 (297)
T 3g4e_A 55 PVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATV-----------------------------D-------NDKK 96 (297)
T ss_dssp CEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEEC-----------------------------C-------TTCS
T ss_pred ceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEec-----------------------------C-------CCCC
Confidence 67899999999965543 56888999875321100000 0 0001
Q ss_pred cCCeEEEEEecCCCcEEEEEcC---------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEcCCCc
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGD---------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGSADNS 160 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~ 160 (309)
...+++++++|+| +++++... ...-.||.+..... . ............++|+| +++.| ++.+.++.
T Consensus 97 ~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~-~~~~~~~~~pngi~~sp-dg~~lyv~~~~~~~ 172 (297)
T 3g4e_A 97 NNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHH-V-KKYFDQVDISNGLDWSL-DHKIFYYIDSLSYS 172 (297)
T ss_dssp SEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSC-E-EEEEEEESBEEEEEECT-TSCEEEEEEGGGTE
T ss_pred CCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCC-E-EEEeeccccccceEEcC-CCCEEEEecCCCCc
Confidence 2357889999998 55554422 12334555543321 2 22233345568999999 78755 55666889
Q ss_pred EEEEecCCCCCCCCCCc-----eeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCce
Q 021657 161 VRMFDRRNLTSNGVGSP-----INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 235 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (309)
|..||+.... +.. ...+......+..++++++|. ++++...++.|..||..+ .+.
T Consensus 173 i~~~~~d~~~----G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~t---------------G~~ 232 (297)
T 3g4e_A 173 VDAFDYDLQT----GQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVT---------------GKR 232 (297)
T ss_dssp EEEEEECTTT----CCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTT---------------CCE
T ss_pred EEEEeccCCC----CcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCC---------------ceE
Confidence 9999974211 322 222333345678999999997 666766678899999875 234
Q ss_pred eeeecCCCcceeeEEEc-cCCCeEEEEecC
Q 021657 236 FFQHAGHRDKVVDFHWN-ASDPWTVVSVSD 264 (309)
Q Consensus 236 ~~~~~~~~~~v~~~~~~-~~~~~~~~s~s~ 264 (309)
+..+..+...+++++|. |++..|+++...
T Consensus 233 ~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 233 LQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 44555566679999998 888888887654
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.35 E-value=2.2e-09 Score=83.79 Aligned_cols=219 Identities=7% Similarity=-0.031 Sum_probs=134.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccC----CccccccCCCCceeecCCCCCCCCcccCCCCCcCccc-
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD----PATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRG- 85 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 85 (309)
.+.++++++++.++++...++.|..||........... ............+... ....+.+..++.. .+...
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFT--QLNGDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEE--ETTTTEEEEECTT-SCEEEE
T ss_pred cceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEE--ccCCCeEEEECCC-CCEEEc
Confidence 57899999999988887778999999987332111110 0001111111111111 1123344455544 22221
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
.+......+..+++.+++ +++++...++.|..+|. +++. ...........+..+++++ +++++++....+.|..||
T Consensus 140 ~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGKL-EEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp ECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEEC
T ss_pred cCCCCCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCcE-EEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEc
Confidence 122234578899999988 67777767889999998 5552 1112223445688999999 888777777778899999
Q ss_pred cCCCCCCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 166 RRNLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
. + ++.... +......+.+++++++|. ++++...++.|..||... .. ..........
T Consensus 216 ~-~------g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g--~~-------------~~~~~~~~~~ 272 (300)
T 2qc5_A 216 T-T------GEISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITNDN--TI-------------QEYQLQTENA 272 (300)
T ss_dssp T-T------CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTTS--CE-------------EEEECCSTTC
T ss_pred C-C------CcEEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCCC--cE-------------EEEECCccCC
Confidence 8 3 333322 233445688999999988 666666678999999732 11 1111222345
Q ss_pred ceeeEEEccCCCeEE
Q 021657 245 KVVDFHWNASDPWTV 259 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~ 259 (309)
.+.++++++++..++
T Consensus 273 ~~~~i~~~~~g~l~v 287 (300)
T 2qc5_A 273 EPHGITFGKDGSVWF 287 (300)
T ss_dssp CCCCEEECTTSCEEE
T ss_pred ccceeEeCCCCCEEE
Confidence 678999999877544
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=2.5e-10 Score=91.22 Aligned_cols=213 Identities=10% Similarity=0.047 Sum_probs=125.1
Q ss_pred ceEEEEECCCCCEEEEec--CCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 11 AEFALAMCPTEPYVLSGG--KDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
.+..++++|+|+++++.. .++.++||.+.++... .+.. . . ....
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~-------~----------------------~----~~~~ 63 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPP-------Q----------------------S----GNAI 63 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCC-------C----------------------C----SSCC
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCC-------c----------------------c----cCcc
Confidence 578999999999998864 2344666766422100 0000 0 0 0112
Q ss_pred cccCCeEEEEEecCCCcEEEEEcC-----CCeEEEEEcCCCCcceEEEeec------cCCceeEEEeccCCCCeEEEEc-
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGD-----DSCLILWDARVGTSPVIKVEKA------HDADLHCVDWNPLDDNLILTGS- 156 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~- 156 (309)
.+-..+..+++++++ +++++-.. ++.|.+||+.+++ ....+.. +...+..+++++.++..+++-.
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCc
Confidence 355679999999998 66655433 5789999998776 3333322 2235689999983345556555
Q ss_pred --CCCcEEEEecCCCCCCCCCCceeeeccC-----------------------------CCCeeEEEEecCCCcEEEEec
Q 021657 157 --ADNSVRMFDRRNLTSNGVGSPINKFEGH-----------------------------SAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 157 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~ 205 (309)
.++.|.+||+.+ ++..+.+..| ...++.|+|+|+++.|+++..
T Consensus 141 ~~~~~~i~v~d~~~------g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~ 214 (343)
T 2qe8_A 141 PDDKAALIRVDLQT------GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM 214 (343)
T ss_dssp SGGGCEEEEEETTT------CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES
T ss_pred cCCCCeEEEEECCC------CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC
Confidence 678999999886 4433333221 123688999999997765544
Q ss_pred CCCcEEEEeCCcccccccCCCCCcCCCCcee--eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 206 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF--FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 206 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
....+..++....... . . ...... ....++......+++++++. ++++...+ +.|.+||..
T Consensus 215 ~~~~l~~~~~~~~~~~-~-~-----~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~-------~~V~~~d~~ 277 (343)
T 2qe8_A 215 HSTSMYRIKSADLSNL-Q-L-----TDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAH-------SAIGVITSA 277 (343)
T ss_dssp SCSEEEEEEHHHHTCT-T-C-----CHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGG-------TEEEEEETT
T ss_pred CCCeEEEEEHHHhcCC-C-C-----ChhhhhcceEecccCCCCceEEECCCCC-EEEEccCC-------CeEEEEECC
Confidence 4445555543210000 0 0 000000 01123334567899999875 56555544 899999983
No 212
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.30 E-value=4.2e-09 Score=79.75 Aligned_cols=196 Identities=12% Similarity=0.049 Sum_probs=130.2
Q ss_pred eEEEEECCCCCEEEEecC--CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 12 EFALAMCPTEPYVLSGGK--DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
...++|+|++.++++.+. ++.|++.|+.++....... +..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~--------------------------------------l~~ 64 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK--------------------------------------MDD 64 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE--------------------------------------CCT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe--------------------------------------cCC
Confidence 579999998765555543 6899999998653222110 111
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
+ .....+++. +..++++.-.++.+.++|..+.+ ....+...... ...+++ ++..++++..++.|.++|..+
T Consensus 65 ~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~--v~~~i~~g~~~--g~glt~-Dg~~l~vs~gs~~l~viD~~t- 135 (266)
T 2iwa_A 65 S-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS--NIKNFTHQMKD--GWGLAT-DGKILYGSDGTSILYEIDPHT- 135 (266)
T ss_dssp T-CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE--EEEEEECCSSS--CCEEEE-CSSSEEEECSSSEEEEECTTT-
T ss_pred C-cceEEEEEe--CCEEEEEEecCCEEEEEECCCCc--EEEEEECCCCC--eEEEEE-CCCEEEEECCCCeEEEEECCC-
Confidence 1 112345554 43667777788999999998877 45555332122 234555 667666667789999999998
Q ss_pred CCCCCCCceeeeccCC-----CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC---
Q 021657 170 TSNGVGSPINKFEGHS-----AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG--- 241 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 241 (309)
.+.+..+.... ..++.+.|. ++. +++....++.|.+.|..+ ++. +..+..
T Consensus 136 -----~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~t-g~V--------------~~~I~~~g~ 193 (266)
T 2iwa_A 136 -----FKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWANIWQTDCIARISAKD-GTL--------------LGWILLPNL 193 (266)
T ss_dssp -----CCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTT-CCE--------------EEEEECHHH
T ss_pred -----CcEEEEEEECCCCcccccceeEEEE-CCE-EEEecCCCCeEEEEECCC-CcE--------------EEEEECCCc
Confidence 77777765322 136788888 664 787777789999999987 222 111111
Q ss_pred ----------CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcccc
Q 021657 242 ----------HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDL 283 (309)
Q Consensus 242 ----------~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~ 283 (309)
.....+.++|+|++..+++++... +.|.+-++...
T Consensus 194 ~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~-------~~v~~i~l~~~ 238 (266)
T 2iwa_A 194 RKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW-------PKLFEIKLHLV 238 (266)
T ss_dssp HHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC-------SEEEEEEEEEC
T ss_pred ccccccccccccCceEEEEEcCCCCEEEEECCCC-------CeEEEEEEecc
Confidence 113568999999999999866554 89999999854
No 213
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.29 E-value=4.4e-10 Score=99.17 Aligned_cols=167 Identities=10% Similarity=-0.000 Sum_probs=101.8
Q ss_pred ccCCeEEEEEecCCCcEEEEEcC-C----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCc----
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGD-D----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNS---- 160 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~---- 160 (309)
|...+..+.|+||| ++|+.+.. + ..|++||+.+++. ... ..+...+..++|+| + +.|+.+..++.
T Consensus 161 ~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~--~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 161 GATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKP--LAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp --EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCE--EEE-EEEEEESCCCEEST-T-SEEEEEECCCC----
T ss_pred CCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCC--CCc-cCCCceeccEEEEC-C-CEEEEEEecCccccc
Confidence 33468899999999 55555443 3 3599999998873 222 11222346889999 7 87877776554
Q ss_pred ----------EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC----CCcEEEEeCCcccccccCCC
Q 021657 161 ----------VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE----DGLLNIWDYEKVGKKVEQGP 226 (309)
Q Consensus 161 ----------i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----dg~i~iwd~~~~~~~~~~~~ 226 (309)
|++|++.+.... ...+.....+...+..+.|+|||++++.+... +..|++||+.....
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~--~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~------ 306 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSA--DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI------ 306 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGG--CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE------
T ss_pred ccccCCCCCEEEEEECCCCchh--CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC------
Confidence 889998763210 01222222233458899999999986655432 34799999876200
Q ss_pred CCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 227 RTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.....+..+...+.... +|++..+++.... ++.++.|.+||+..
T Consensus 307 -------~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~----~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 307 -------GPVTALIPDLKAQWDFV-DGVGDQLWFVSGD----GAPLKKIVRVDLSG 350 (741)
T ss_dssp -------CCCEEEECSSSSCEEEE-EEETTEEEEEECT----TCTTCEEEEEECSS
T ss_pred -------cccEEecCCCCceEEEE-eccCCEEEEEECC----CCCCCEEEEEeCCC
Confidence 00122333444444443 4888887766543 23457899999873
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.27 E-value=1.5e-10 Score=92.36 Aligned_cols=243 Identities=9% Similarity=0.061 Sum_probs=145.2
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEeCCccccccccCC-----------ccccccCCCCceeecCCCCCCCC
Q 021657 14 ALAMCPTEPYVLSGG----------KDKSVVLWSIQDHITSSATDP-----------ATAKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~----------~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.++++|||++|+.+. .++.|.+||..+......... .......................
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887765 367899999998743332211 11112222233333332233567
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-CCcceEEEeecc----CCcee-EEEecc
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAH----DADLH-CVDWNP 146 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~----~~~v~-~~~~~~ 146 (309)
+.++|..+.+.+..+.-.. +....|.+.+.+++.+.||.+.+.++.. ++. ......+ ..++. ...|.+
T Consensus 162 VsVID~~t~~vv~tI~v~g----~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v--~~~~~~~~~~~~~~~~~~~~~~~ 235 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD----CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP--EITHTEVFHPEDEFLINHPAYSQ 235 (386)
T ss_dssp EEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEETTSCEEEEECCSSSCC--EEEECCCCSCTTSCBCSCCEEET
T ss_pred EEEEECCCCcEEEEEECCC----cceeecCCCceeEEECCCCCEEEEECCCCCeE--EEeecceeccccccccccceeEc
Confidence 7788888887777664321 1223355556778888999999999876 442 2211111 12221 245543
Q ss_pred CCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec----------cCCCCeeEEEEecCCCcEEEEecC---------C
Q 021657 147 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE----------GHSAAVLCVQWSPDKSSVFGSSAE---------D 207 (309)
Q Consensus 147 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~~---------d 207 (309)
.++++++ .+.+|.+++.|+.... .+.+..+. ........+++++++..++++... .
T Consensus 236 ~dG~~~~-vs~~g~V~v~d~~~~~----~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 236 KAGRLVW-PTYTGKIHQIDLSSGD----AKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTTEEEE-EBTTSEEEEEECTTSS----CEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCCcEEE-EeCCCEEEEEECCCCc----ceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 1665555 4558999999997621 11222221 012234457889999988865431 2
Q ss_pred CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC-eEEEEecCCCCCCCCCCeEEEEEccccccC
Q 021657 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP-WTVVSVSDDCDSTGGGGTLQIWRMSDLIYR 286 (309)
Q Consensus 208 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~ 286 (309)
+.|.++|+.+ .+.+..+.. ...+.+++++|++. .|+++...+ +.|.++|..
T Consensus 311 ~~V~viD~~t---------------~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~-------~~VsViD~~----- 362 (386)
T 3sjl_D 311 RFVVVLDAKT---------------GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGD-------KTLYIHDAE----- 362 (386)
T ss_dssp EEEEEEETTT---------------CCEEEEEEE-EEEECEEEECSSSSCEEEEEETTT-------TEEEEEETT-----
T ss_pred CEEEEEECCC---------------CeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCC-------CeEEEEECC-----
Confidence 5799999988 222222221 23688999999986 666544434 899999998
Q ss_pred ChhhHhHhhh
Q 021657 287 PQDEVLAELE 296 (309)
Q Consensus 287 ~~~~~~~~~~ 296 (309)
+++.+++++
T Consensus 363 -t~k~~~~i~ 371 (386)
T 3sjl_D 363 -SGEELRSVN 371 (386)
T ss_dssp -TCCEEEEEC
T ss_pred -CCcEEEEec
Confidence 666666654
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.26 E-value=4.4e-09 Score=83.39 Aligned_cols=191 Identities=9% Similarity=0.050 Sum_probs=115.3
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
.|.+++|+|+|+++++. .+ .|.+||.+++........ . ....
T Consensus 91 ~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~-----------------------------~-------~~~~ 132 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL-----------------------------E-------SDLP 132 (326)
T ss_dssp CEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS-----------------------------S-------TTCT
T ss_pred cceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeC-----------------------------C-------CCCC
Confidence 57899999999877754 33 488888765321100000 0 0001
Q ss_pred cCCeEEEEEecCCCcEEEEEcC------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE-EEEcCCCcEEE
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGD------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI-LTGSADNSVRM 163 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~i 163 (309)
...++++.++|+| +++++... .+.|..++ +++ ...+.........++|+| +++.+ ++.+.++.|.+
T Consensus 133 ~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~---~~~~~~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 133 GNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGK---VTKLFADISIPNSICFSP-DGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp TEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTE---EEEEEEEESSEEEEEECT-TSCEEEEEETTTCEEEE
T ss_pred CCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCc---EEEeeCCCcccCCeEEcC-CCCEEEEEECCCCEEEE
Confidence 2358899999998 55554432 24555555 333 222223334567899999 88765 44456789999
Q ss_pred EecC--CC-CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeec
Q 021657 164 FDRR--NL-TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHA 240 (309)
Q Consensus 164 ~d~~--~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
||+. +. .... .+....+......+..+++.++|. ++++...++.|.+||... ..+..+.
T Consensus 206 ~d~~~~~Gl~~~~-~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g----------------~~~~~i~ 267 (326)
T 2ghs_A 206 VPLDARTGLPTGK-AEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDG----------------NHIARYE 267 (326)
T ss_dssp EEBCTTTCCBSSC-CEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTC----------------CEEEEEE
T ss_pred EEcccccCCcccC-ceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCC----------------CEEEEEE
Confidence 9986 31 1000 012223333345578899999997 555555568899998732 1233344
Q ss_pred CCCcceeeEEEc-cCCCeEEEEecC
Q 021657 241 GHRDKVVDFHWN-ASDPWTVVSVSD 264 (309)
Q Consensus 241 ~~~~~v~~~~~~-~~~~~~~~s~s~ 264 (309)
.+...+.+++|+ |++..|+++...
T Consensus 268 ~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 268 VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCCcEEEEEecCCCCEEEEEecC
Confidence 455678999998 888877776554
No 216
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.25 E-value=3e-08 Score=76.19 Aligned_cols=204 Identities=6% Similarity=-0.068 Sum_probs=127.5
Q ss_pred eEEEEECCCCCE-EEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 12 EFALAMCPTEPY-VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 12 V~~~~~~~~~~~-l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+..++|++++.. +++-..++.|.++++..... ...+...
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----------------------------------------~~~~~~~ 77 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP----------------------------------------TTIIRQD 77 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCC----------------------------------------EEEECTT
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCc----------------------------------------EEEEECC
Confidence 468899986554 45666678999999864210 0001111
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC---CCcEEEEecC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA---DNSVRMFDRR 167 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~i~d~~ 167 (309)
......++++++++.++++-...+.|.++++.... ..............++++| ++..|..+.. .+.|..+++.
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~--~~~~~~~~~~~P~~i~vd~-~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ--RRVLFDTGLVNPRGIVTDP-VRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSSEEEEEEET-TTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC--EEEEEECCCCCccEEEEee-CCCEEEEEECCCCCcEEEEEecC
Confidence 23568899999765777777778899999986443 2222222224578999999 5555444433 4688888876
Q ss_pred CCCCCCCCCceeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 168 NLTSNGVGSPINKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
. .....+. ..-.....+++++++.+|+++-...+.|.++|+...... .+ ... ....
T Consensus 155 g-------~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-------------~~--~~~-~~~P 211 (267)
T 1npe_A 155 G-------TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR-------------KV--LEG-LQYP 211 (267)
T ss_dssp S-------CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE-------------EE--EEC-CCSE
T ss_pred C-------CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE-------------EE--ecC-CCCc
Confidence 4 2222221 223467899999998888888888899999998752110 11 111 1223
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhhh
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAELE 296 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~ 296 (309)
..++.. +..++++.... +.|..+|.. +++.+.++.
T Consensus 212 ~gi~~d--~~~lyva~~~~-------~~v~~~d~~------~g~~~~~i~ 246 (267)
T 1npe_A 212 FAVTSY--GKNLYYTDWKT-------NSVIAMDLA------ISKEMDTFH 246 (267)
T ss_dssp EEEEEE--TTEEEEEETTT-------TEEEEEETT------TTEEEEEEC
T ss_pred eEEEEe--CCEEEEEECCC-------CeEEEEeCC------CCCceEEEc
Confidence 456543 56777755444 789999987 455555554
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.22 E-value=3.8e-10 Score=91.69 Aligned_cols=242 Identities=7% Similarity=0.005 Sum_probs=145.1
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEeCCccccccccCC-----------ccccccCCCCceeecCCCCCCCC
Q 021657 14 ALAMCPTEPYVLSGG----------KDKSVVLWSIQDHITSSATDP-----------ATAKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~----------~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.++++||+++|+.+. .++.|.++|..+......... ......+......+.........
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 789999999888775 477999999988743322211 11112222222223222223456
Q ss_pred cccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE----eeccCCc-eeEEEeccC
Q 021657 73 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV----EKAHDAD-LHCVDWNPL 147 (309)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~-v~~~~~~~~ 147 (309)
+.+.|..+.+.+..+.--. +....|++...+++.+.||.+.+.+..+++ .... +.....+ ...+.+.+
T Consensus 202 VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~--v~~~~~~~~~v~~~p~~~~~~~~~- 274 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGE--TKVTNTEVFHTEDELLINHPAFSL- 274 (426)
T ss_dssp EEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTC--CEEEECCCCSCTTSCBCSCCEECT-
T ss_pred EEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCc--EEEEeeeeeccCCCceeeEeeecC-
Confidence 7777777777666554311 133456555677778889998888885554 2211 1111112 12456788
Q ss_pred CCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeecc----------CCCCeeEEEEecCCCcEEEEec---------CCC
Q 021657 148 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG----------HSAAVLCVQWSPDKSSVFGSSA---------EDG 208 (309)
Q Consensus 148 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~---------~dg 208 (309)
++..++.....+.+.+.|+.... ...+..+.. .......++++|++.+++++.. .++
T Consensus 275 dg~~~~~~s~~g~V~ViD~~~~~----~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~ 350 (426)
T 3c75_H 275 RSGRLVWPTYTGKIFQADLTAEG----ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASR 350 (426)
T ss_dssp TTCEEEEEBTTSEEEEEEECSSC----EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEE
T ss_pred CCCEEEEEeCCCcEEEEeccCCc----eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCC
Confidence 77766666778999999986521 001111110 0112234789999998876643 135
Q ss_pred cEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC-eEEEEecCCCCCCCCCCeEEEEEccccccCC
Q 021657 209 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP-WTVVSVSDDCDSTGGGGTLQIWRMSDLIYRP 287 (309)
Q Consensus 209 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~ 287 (309)
.|.++|+.+ .+.+..+.. ......++|+|++. .++++...+ +.|.++|+.
T Consensus 351 ~VsVID~~T---------------~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s-------~~VsVID~~------ 401 (426)
T 3c75_H 351 FVVVLNAET---------------GERINKIEL-GHEIDSINVSQDAEPLLYALSAGT-------QTLHIYDAA------ 401 (426)
T ss_dssp EEEEEETTT---------------CCEEEEEEE-EEEECEEEECCSSSCEEEEEETTT-------TEEEEEETT------
T ss_pred EEEEEECCC---------------CeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCC-------CeEEEEECC------
Confidence 799999988 223333322 12578999999998 666554344 899999999
Q ss_pred hhhHhHhh
Q 021657 288 QDEVLAEL 295 (309)
Q Consensus 288 ~~~~~~~~ 295 (309)
+.+.++++
T Consensus 402 t~kvv~tI 409 (426)
T 3c75_H 402 TGEELRSV 409 (426)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEe
Confidence 56666654
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.22 E-value=3.9e-09 Score=82.85 Aligned_cols=183 Identities=9% Similarity=0.078 Sum_probs=115.1
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc-
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG- 89 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (309)
.+..++++++|+++++...++.|.+|+.+....... ....+
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~--------------------------------------~~~~~~ 128 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLV--------------------------------------GRYAGK 128 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE--------------------------------------CEETTE
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEE--------------------------------------eccCCC
Confidence 578999999999777766778899998752110000 00000
Q ss_pred ccCCeEEEEEecCCCcEEEE----EcC-------------CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeE
Q 021657 90 HEDTVEDVTFCPSSAQEFCS----VGD-------------DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI 152 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 152 (309)
....++++.+.++| .++++ |.. .+.|..+|..+++. .... .......++|+| +++.|
T Consensus 129 ~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~~~~--~~~~p~gl~~sp-dg~~l 202 (305)
T 3dr2_A 129 RLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--QRMA--DLDHPNGLAFSP-DEQTL 202 (305)
T ss_dssp ECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--EEEE--EESSEEEEEECT-TSSEE
T ss_pred ccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--EEEe--cCCCCcceEEcC-CCCEE
Confidence 12346789999998 66665 332 25677888766662 2222 334567899999 88877
Q ss_pred EEEcCC------CcEEEEecCCCCCCCCCCc--eeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCccccccc
Q 021657 153 LTGSAD------NSVRMFDRRNLTSNGVGSP--INKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 223 (309)
Q Consensus 153 ~~~~~d------g~i~i~d~~~~~~~~~~~~--~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~ 223 (309)
+.+... +.|.+||+.. ... ...+ .........++++++|. ++ ++..+ .|.+|+...
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~------~~l~~~~~~~~~~~~~pdgi~~d~~G~-lw-v~~~~-gv~~~~~~g------ 267 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRD------GALHDRRHFASVPDGLPDGFCVDRGGW-LW-SSSGT-GVCVFDSDG------ 267 (305)
T ss_dssp EEEECCC---CCCEEEEEEEET------TEEEEEEEEECCSSSCCCSEEECTTSC-EE-ECCSS-EEEEECTTS------
T ss_pred EEEecCCcCCCCCEEEEEEecC------CCccCCeEEEECCCCCCCeEEECCCCC-EE-EecCC-cEEEECCCC------
Confidence 776554 7899999875 221 1111 11234456789999998 55 44444 488998743
Q ss_pred CCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEec
Q 021657 224 QGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s 263 (309)
..+..+..+. .+..++|+|++..|+++.+
T Consensus 268 ----------~~~~~~~~~~-~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 268 ----------QLLGHIPTPG-TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp ----------CEEEEEECSS-CCCEEEECTTSCEEEEEET
T ss_pred ----------CEEEEEECCC-ceeEEEEeCCCCEEEEEcC
Confidence 1223333333 5889999998888887654
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.21 E-value=1.2e-08 Score=82.32 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=75.2
Q ss_pred EEEEecCCCcEEEEEc----------CCCeEEEEEcCCCCcceEEEeecc-------CCceeEEEeccCCCCeEEEEcC-
Q 021657 96 DVTFCPSSAQEFCSVG----------DDSCLILWDARVGTSPVIKVEKAH-------DADLHCVDWNPLDDNLILTGSA- 157 (309)
Q Consensus 96 ~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~- 157 (309)
.+.++|++ +.++.+. .++.|.+||..+.+ ....+... ......++|+| ++++|+++..
T Consensus 70 ~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFA 145 (373)
T ss_pred CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCc--EEEEEECCCccccccCCCccceEECC-CCCEEEEEecC
Confidence 89999999 5555543 36789999998776 33333211 12356899999 9999888764
Q ss_pred -CCcEEEEecCCCCCCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 158 -DNSVRMFDRRNLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 158 -dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
++.|.++| .+ ++.+.+ +... . ++.+.|++...+++.+.||.+.++|.
T Consensus 146 ~~~~v~viD-~t------~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 146 AGPAVGLVV-QG------GSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CCCeEEEEE-CC------CCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 57899999 88 777776 5432 2 25566777666777888999988888
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=3.2e-09 Score=84.77 Aligned_cols=202 Identities=9% Similarity=0.060 Sum_probs=120.4
Q ss_pred CCCCcceEEEEECCCCCEEEEecC-----CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC
Q 021657 6 GHQDNAEFALAMCPTEPYVLSGGK-----DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 80 (309)
Q Consensus 6 ~H~~~~V~~~~~~~~~~~l~t~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (309)
+|.. .+.+++++++++++++-.. ++.|.+||+.++........ .
T Consensus 64 ~~~~-~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~-----------------------------~- 112 (343)
T 2qe8_A 64 ITFD-TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYL-----------------------------P- 112 (343)
T ss_dssp CCCS-CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEEC-----------------------------C-
T ss_pred ccee-EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEEC-----------------------------C-
Confidence 3445 6899999999987666544 67899999875432111100 0
Q ss_pred cCcccccccccCCeEEEEEecCCCcEEEEEc---CCCeEEEEEcCCCCcceEEEeecc----------------------
Q 021657 81 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG---DDSCLILWDARVGTSPVIKVEKAH---------------------- 135 (309)
Q Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~---------------------- 135 (309)
.....+...+..++++++++..+++.. .++.|.+||+.+++ ....+..|
T Consensus 113 ----~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~--~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~ 186 (343)
T 2qe8_A 113 ----PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL--AARVLQGYPGIAPEDIDLVIDGVPVQIGQP 186 (343)
T ss_dssp ----TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC--EEEECTTCTTTSCCSCCCEETTEECBEECT
T ss_pred ----hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC--EEEEecCCCcccccccceeECCEEEEeccC
Confidence 000113345688999986546666665 67899999998766 33333221
Q ss_pred -------CCceeEEEeccCCCCeEEEEcCCC-cEEEEecCCCCCCCC--CCcee--eeccCCCCeeEEEEecCCCcEEEE
Q 021657 136 -------DADLHCVDWNPLDDNLILTGSADN-SVRMFDRRNLTSNGV--GSPIN--KFEGHSAAVLCVQWSPDKSSVFGS 203 (309)
Q Consensus 136 -------~~~v~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~ 203 (309)
...+..|+|+| +++.|+.+..++ .+..++......... .+... ...++......++++++|. ++++
T Consensus 187 ~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va 264 (343)
T 2qe8_A 187 DGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN-IYVG 264 (343)
T ss_dssp TSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEE
T ss_pred CCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC-EEEE
Confidence 12357899999 888888776665 555555321000000 00001 1112334567799999987 6778
Q ss_pred ecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEE
Q 021657 204 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 204 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 260 (309)
...++.|.+||... ++. ..+.. ..+.....++++.+++..+++
T Consensus 265 ~~~~~~V~~~d~~~-G~~------------~~~~~-~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 265 DLAHSAIGVITSAD-RAY------------KLLVT-DEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp EGGGTEEEEEETTT-TEE------------EEEEE-CGGGSCEEEEEECTTSCEEEE
T ss_pred ccCCCeEEEEECCC-CCE------------EEEEE-CCceecCCeeEECCCCcEEEE
Confidence 88899999999833 111 11111 112456889999997664443
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.19 E-value=2.3e-12 Score=103.94 Aligned_cols=140 Identities=13% Similarity=0.092 Sum_probs=69.6
Q ss_pred CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEE
Q 021657 20 TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTF 99 (309)
Q Consensus 20 ~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 99 (309)
++..+++++.||.|+.||.+++...... .. +.+.+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~----------------------------------------~~--~~~~s~p~ 45 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTL----------------------------------------KE--DPVLQVPT 45 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEE----------------------------------------EC--CCSCCCC-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEe----------------------------------------cC--CCceecce
Confidence 5788999999999999999865333221 11 12222233
Q ss_pred ecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCC-cee-EEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCc
Q 021657 100 CPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA-DLH-CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 177 (309)
Q Consensus 100 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 177 (309)
..++ .++++++.||.|+.||..+++. ......+.. .+. +..+. .+..+++++.++.++.||.++ ++.
T Consensus 46 ~~~g-~~~v~~s~dg~l~a~d~~tG~~--~w~~~~~~~~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~t------G~~ 114 (369)
T 2hz6_A 46 HVEE-PAFLPDPNDGSLYTLGSKNNEG--LTKLPFTIPELVQASPCRS--SDGILYMGKKQDIWYVIDLLT------GEK 114 (369)
T ss_dssp -----CCEEECTTTCCEEEC-----CC--SEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC----------
T ss_pred EcCC-CEEEEeCCCCEEEEEECCCCce--eeeeeccCccccccCceEe--cCCEEEEEeCCCEEEEEECCC------CcE
Confidence 3455 5777888999999999988773 222221111 111 11111 345677788899999999999 888
Q ss_pred eeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 178 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 178 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+.++..+. ...++|++..+ ++++.|+.|+.||.++
T Consensus 115 ~w~~~~~~----~~~~~p~~~~v-~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 115 QQTLSSAF----ADSLSPSTSLL-YLGRTEYTITMYDTKT 149 (369)
T ss_dssp ----------------------E-EEEEEEEEEECCCSSS
T ss_pred EEEecCCC----cccccccCCEE-EEEecCCEEEEEECCC
Confidence 87776543 23456677754 5788899999999987
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.18 E-value=5.5e-09 Score=85.36 Aligned_cols=157 Identities=10% Similarity=0.018 Sum_probs=106.9
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC--cEEEEecCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN--SVRMFDRRNL 169 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~ 169 (309)
.....|+|++++ .++++...++.|++||..++. ....... ..... ++|+| +++.|+++..++ .|.++|...
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~--~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~- 203 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNK--VTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKAS- 203 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTE--EEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGG-
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCE--EEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCC-
Confidence 357899999998 788888888999999997766 3333333 33344 99999 888888888766 788888876
Q ss_pred CCCCCCCceeee----ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee--ecCCC
Q 021657 170 TSNGVGSPINKF----EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ--HAGHR 243 (309)
Q Consensus 170 ~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 243 (309)
......+ ......+.+++++|++..|++ +..++.|+.||....... .+.. ..++.
T Consensus 204 -----~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~-------------~~~~~~~~g~~ 264 (409)
T 3hrp_A 204 -----GWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVT-------------LIKQLELSGSL 264 (409)
T ss_dssp -----TTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEE-------------EEEECCCCSCC
T ss_pred -----CceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEE-------------EEecccccCCC
Confidence 3333333 213456788999996555665 666889999998752111 0100 11111
Q ss_pred cc--eeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 244 DK--VVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 244 ~~--v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.. ...++|+|++..++++-..+ +.|+.|+..
T Consensus 265 ~~~P~~~ia~~p~~g~lyv~d~~~-------~~I~~~~~~ 297 (409)
T 3hrp_A 265 GTNPGPYLIYYFVDSNFYMSDQNL-------SSVYKITPD 297 (409)
T ss_dssp CCSSCCEEEEETTTTEEEEEETTT-------TEEEEECTT
T ss_pred CCCccccEEEeCCCCEEEEEeCCC-------CEEEEEecC
Confidence 11 23899999877888766555 889999876
No 223
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.17 E-value=1.4e-08 Score=76.07 Aligned_cols=191 Identities=12% Similarity=0.086 Sum_probs=118.3
Q ss_pred eEEEEECCCCCEEEEecCCC--cEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDK--SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
...|.|+ ++.++.+.+.+| .|+++|++++.... .+.-
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~----------------------------------------~~~l 83 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQ----------------------------------------QIEL 83 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEE----------------------------------------EEEC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEE----------------------------------------EEec
Confidence 5788998 676777777776 89999998653221 1111
Q ss_pred ccCCe--EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 90 HEDTV--EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 90 ~~~~v--~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
. ... ..+.. ++..+++..-.++.+.+||..+.+ ....+.... .-..++ + ++..|+.+..++.|.++|..
T Consensus 84 ~-~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~--~~~ti~~~~-eG~glt--~-dg~~L~~SdGs~~i~~iDp~ 154 (262)
T 3nol_A 84 G-KRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLR--QVRSFNYDG-EGWGLT--H-NDQYLIMSDGTPVLRFLDPE 154 (262)
T ss_dssp C-TTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCC--EEEEEECSS-CCCCEE--E-CSSCEEECCSSSEEEEECTT
T ss_pred C-CccceeEEEE--eCCEEEEEEeeCCEEEEEECccCc--EEEEEECCC-CceEEe--c-CCCEEEEECCCCeEEEEcCC
Confidence 1 122 23444 343666666678999999999888 555554422 223444 4 56767776668889999999
Q ss_pred CCCCCCCCCceeeeccCC-----CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 168 NLTSNGVGSPINKFEGHS-----AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
+ .+.+.++.... ..++.+.|. +|+ +++..-.++.|.+.|.++ ++.........-.+ ........
T Consensus 155 T------~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~t-G~V~~~Id~~~L~~--~~~~~~~~ 223 (262)
T 3nol_A 155 S------LTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPET-GKVTGIIDLNGILA--EAGPLPSP 223 (262)
T ss_dssp T------CSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTT-CBEEEEEECTTGGG--GSCSCCSS
T ss_pred C------CeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCC-CcEEEEEECCcCcc--ccccccCc
Confidence 8 77777765421 335567776 665 787777788999999887 33221110000000 00000111
Q ss_pred CcceeeEEEccCCCeEEEEec
Q 021657 243 RDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s 263 (309)
..-.+.|+|+|++..+++++-
T Consensus 224 ~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 224 IDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CCCEEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEcCCCCEEEEECC
Confidence 235689999999999988664
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.14 E-value=1.4e-08 Score=81.90 Aligned_cols=169 Identities=16% Similarity=0.182 Sum_probs=110.5
Q ss_pred CeEEEEEecCCCcEEEEEcCC------CeEEEEEcCCCCcceEEEeeccC---CceeEEEeccCCCCeEEEEc-------
Q 021657 93 TVEDVTFCPSSAQEFCSVGDD------SCLILWDARVGTSPVIKVEKAHD---ADLHCVDWNPLDDNLILTGS------- 156 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~------- 156 (309)
.-..+...|+| +++++..+ |.|.+.|..+.+ .+....... .--+.+.|+| +++.+++..
T Consensus 139 ~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~--v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~ 213 (462)
T 2ece_A 139 RLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFE--PLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTI 213 (462)
T ss_dssp EEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCC--EEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHH
T ss_pred cccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCe--EEEEEccCCCCccccceEEECC-CCCEEEEccCcCcccc
Confidence 34567788987 55565555 789999999888 566554222 2244688899 888888874
Q ss_pred ------------CCCcEEEEecCCCCCCCCCCceeeeccCC--CCeeEEEE--ecCCCcEEEEec-----CCCcEEEEeC
Q 021657 157 ------------ADNSVRMFDRRNLTSNGVGSPINKFEGHS--AAVLCVQW--SPDKSSVFGSSA-----EDGLLNIWDY 215 (309)
Q Consensus 157 ------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~~v~~~~~--~~~~~~l~~~~~-----~dg~i~iwd~ 215 (309)
.+.+|.+||+.+ ++.+.++.... .....|.| +|+++++++++- .++.|.+|..
T Consensus 214 ~~g~~~~~~~~~~~d~V~v~D~~~------~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 214 EDGLKLEHLKDRYGNRIHFWDLRK------RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp TTCCCTTTHHHHSCCEEEEEETTT------TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred ccccchhhhhhccCCEEEEEECCC------CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 368999999998 77777776531 23445655 999999887776 7888988776
Q ss_pred CcccccccCCCCCcCCCCce----e----eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 216 EKVGKKVEQGPRTTNYPAGL----F----FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.. +.......- ..+... + ..+.+-......+.++|++.+|+++.-.. +.|.+||+.+
T Consensus 288 d~-g~~~~~~vI--di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~-------d~VavfdV~d 352 (462)
T 2ece_A 288 ED-GKWNAEKVI--EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI-------GEVRQYDISN 352 (462)
T ss_dssp ET-TEEEEEEEE--EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT-------TEEEEEECSS
T ss_pred cC-CceeEEEEE--eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC-------CEEEEEEecC
Confidence 53 221000000 000000 0 00000123578999999999999876554 8999999963
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=2.1e-07 Score=71.41 Aligned_cols=160 Identities=5% Similarity=-0.000 Sum_probs=106.5
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..+..++|+++++.++++-..++.|..+++.... ..............++++|..+.++++-...+.|.++++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g--- 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE--PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG--- 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC--CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS---
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC--cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC---
Confidence 4578999999765777777788999999987654 23333233356789999983345556666678999999874
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC--CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE--DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
................++++|++.+++++... .+.|..+++..... ..+. .........+
T Consensus 111 ---~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-------------~~~~--~~~~~~P~gi 172 (267)
T 1npe_A 111 ---TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-------------RILA--QDNLGLPNGL 172 (267)
T ss_dssp ---CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-------------EEEE--CTTCSCEEEE
T ss_pred ---CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-------------EEEE--ECCCCCCcEE
Confidence 22211222222467899999977767766544 46888888764111 1111 1122356899
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+++|++.+++++-... +.|.++++.
T Consensus 173 a~d~~~~~lyv~d~~~-------~~I~~~~~~ 197 (267)
T 1npe_A 173 TFDAFSSQLCWVDAGT-------HRAECLNPA 197 (267)
T ss_dssp EEETTTTEEEEEETTT-------TEEEEEETT
T ss_pred EEcCCCCEEEEEECCC-------CEEEEEecC
Confidence 9999888888766554 799999987
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.11 E-value=6e-10 Score=89.03 Aligned_cols=247 Identities=9% Similarity=-0.035 Sum_probs=137.2
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEeCCccccccccCC-----------ccccccCCCCceeecCCCCCCCC
Q 021657 14 ALAMCPTEPYVLSGG----------KDKSVVLWSIQDHITSSATDP-----------ATAKSAGSSGSIIKQSPKPGDGN 72 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~----------~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 72 (309)
.+.++||+++++.+. .++.|.+||+.+......... ......+......+.........
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 689999999988775 478999999998744333211 01111111222222211112233
Q ss_pred ccc--CCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCC-----CCcceE--EEeeccCCceeEEE
Q 021657 73 DKA--ADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-----GTSPVI--KVEKAHDADLHCVD 143 (309)
Q Consensus 73 ~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~--~~~~~~~~~v~~~~ 143 (309)
+.+ +|..+ +..+.- .+. ....|++...+++.+.||.+.+.|+.+ ++.... ..+.....+. .
T Consensus 149 v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~ 218 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q 218 (368)
T ss_dssp EEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E
T ss_pred EEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c
Confidence 444 55554 222211 111 223466656777788899998888876 221000 0011122333 3
Q ss_pred eccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC----------CCCeeEEEEecCCCcEEEEec---C----
Q 021657 144 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH----------SAAVLCVQWSPDKSSVFGSSA---E---- 206 (309)
Q Consensus 144 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~---~---- 206 (309)
.+ ++..++..+. +.+.+.|..... .+.+..+... ......++++|++++++++.. .
T Consensus 219 -~~-~~~~~~~vs~-~~V~viD~~~~~----~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 219 -AN-YPGMLVWAVA-SSILQGDIPAAG----ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291 (368)
T ss_dssp -ET-TTTEEEECBS-SCCEEEECCSSC----CEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred -cc-cCCEEEEEcC-CEEEEEECCCCc----ceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccc
Confidence 55 4555555555 899999986521 1222222110 111223789999998876543 2
Q ss_pred -CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEec-CCCCCCCCCCeEEEEEccccc
Q 021657 207 -DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVS-DDCDSTGGGGTLQIWRMSDLI 284 (309)
Q Consensus 207 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s-~d~~s~~~dg~v~vw~~~~~~ 284 (309)
++.+.++|+.+. +.+..+... .....++|+|++.+++++.. .+ +.|.++|+.
T Consensus 292 ~~~~~~ViD~~t~---------------~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~-------~~VsVID~~--- 345 (368)
T 1mda_H 292 AAENTSSVTASVG---------------QTSGPISNG-HDSDAIIAAQDGASDNYANSAGT-------EVLDIYDAA--- 345 (368)
T ss_dssp CEEEEEEEESSSC---------------CEEECCEEE-EEECEEEECCSSSCEEEEEETTT-------TEEEEEESS---
T ss_pred cCCCEEEEECCCC---------------eEEEEEECC-CCcceEEECCCCCEEEEEccCCC-------CeEEEEECC---
Confidence 235669999882 223333222 25799999999987777655 34 899999999
Q ss_pred cCChhhHhHhhhcccceEEEeee
Q 021657 285 YRPQDEVLAELEKFKAHVISCTS 307 (309)
Q Consensus 285 ~~~~~~~~~~~~~h~~~v~~~~~ 307 (309)
+.+.+++++... ..+.+++
T Consensus 346 ---t~kvv~~I~vg~-~P~~i~~ 364 (368)
T 1mda_H 346 ---SDQDQSSVELDK-GPESLSV 364 (368)
T ss_dssp ---SCEEEEECCCCS-CCCEEEC
T ss_pred ---CCcEEEEEECCC-CCCEEEe
Confidence 677777776433 2334444
No 227
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.10 E-value=7.1e-08 Score=72.23 Aligned_cols=189 Identities=6% Similarity=-0.011 Sum_probs=119.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
...|.|+ ++.++.+.+.+|.|+++|++++... ..+....
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~----------------------------------------~~~l~~~ 95 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPV----------------------------------------WMERLGN 95 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCS----------------------------------------EEEECTT
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEE----------------------------------------eEECCCC
Confidence 5688887 4667778888999999999865322 1110001
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
.--..+.+ ++..+++..-.++.+.+||..+.+ .+..+... ..-..++ + ++..|+.+..++.|.++|..+
T Consensus 96 ~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~--~~~ti~~~-~eGwGLt--~-Dg~~L~vSdGs~~l~~iDp~T--- 164 (268)
T 3nok_A 96 IFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQ--RERTTRYS-GEGWGLC--Y-WNGKLVRSDGGTMLTFHEPDG--- 164 (268)
T ss_dssp CCEEEEEE--CSSCEEEEESSSCEEEEEETTTTE--EEEEEECS-SCCCCEE--E-ETTEEEEECSSSEEEEECTTT---
T ss_pred cceeEEEE--eCCEEEEEEccCCEEEEEECCcCc--EEEEEeCC-CceeEEe--c-CCCEEEEECCCCEEEEEcCCC---
Confidence 11123444 444666677789999999999888 55555442 2234555 4 567777777799999999998
Q ss_pred CCCCCceeeeccCC-----CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee----ecCC
Q 021657 172 NGVGSPINKFEGHS-----AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ----HAGH 242 (309)
Q Consensus 172 ~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 242 (309)
.+.+.++.... ..++-+.|. +|+ +++..-.+..|.+.|.++ ++......... +.-. ....
T Consensus 165 ---~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~T-G~V~~~Idl~~-----L~~~~~~~~~~~ 233 (268)
T 3nok_A 165 ---FALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPAT-GTVVGVIDASA-----LTRAVAGQVTNP 233 (268)
T ss_dssp ---CCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTT-CBEEEEEECHH-----HHHHHTTTCCCT
T ss_pred ---CeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCC-CcEEEEEECCC-----CcccccccccCc
Confidence 77777765422 245677777 665 787776788999999887 33221100000 0000 0112
Q ss_pred CcceeeEEEccCCCeEEEEec
Q 021657 243 RDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s 263 (309)
..-.+.|+|+|++..|++++-
T Consensus 234 ~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 234 EAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCCEEEEEECTTTCCEEEEET
T ss_pred CCceEEEEEcCCCCEEEEeCC
Confidence 235689999999888888653
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.09 E-value=3.1e-08 Score=86.75 Aligned_cols=202 Identities=13% Similarity=0.066 Sum_probs=123.3
Q ss_pred EEEEECCCCCEEEEecCCCc-------------EEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCC
Q 021657 13 FALAMCPTEPYVLSGGKDKS-------------VVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 79 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (309)
..++|+ |++.|+.++.+.. |++|++.+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~----------------------------------- 221 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED----------------------------------- 221 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGG-----------------------------------
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCccc-----------------------------------
Confidence 467899 9998888877743 888887643110
Q ss_pred CcCccccccc-ccCCeEEEEEecCCCcEEEEEcC---CCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE
Q 021657 80 SVGPRGIYNG-HEDTVEDVTFCPSSAQEFCSVGD---DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 80 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 155 (309)
...+..... |...+..+.|+|+|+.++++.+. +..|.++|+.++.... ..+..+....... |++.++.+++..
T Consensus 222 -~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~-~~l~~~~~~~~~~-~~~~g~~l~~~t 298 (693)
T 3iuj_A 222 -DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL-LTVQGDLDADVSL-VDNKGSTLYLLT 298 (693)
T ss_dssp -CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC-EEEECSSSSCEEE-EEEETTEEEEEE
T ss_pred -ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce-EEEeCCCCceEEE-EeccCCEEEEEE
Confidence 011122223 44457789999999555555443 3589999997764222 3344455555554 556244455555
Q ss_pred cCC---CcEEEEecCCCCCCCCCCc--eeeeccCCCCeeEEEEecCCCcEEEEecCCC--cEEEEeCCcccccccCCCCC
Q 021657 156 SAD---NSVRMFDRRNLTSNGVGSP--INKFEGHSAAVLCVQWSPDKSSVFGSSAEDG--LLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 156 ~~d---g~i~i~d~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg--~i~iwd~~~~~~~~~~~~~~ 228 (309)
..+ +.|..+|+.+ +.. ...+..+...+. .|++++.+|+++...++ .|++||+.. +.
T Consensus 299 ~~~~~~~~l~~~d~~~------~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g-~~-------- 361 (693)
T 3iuj_A 299 NRDAPNRRLVTVDAAN------PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG-KR-------- 361 (693)
T ss_dssp CTTCTTCEEEEEETTS------CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS-CE--------
T ss_pred CCCCCCCEEEEEeCCC------CCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC-Ce--------
Confidence 443 5789999987 332 345555555554 89999998776666666 578888764 11
Q ss_pred cCCCCceeeee-cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 229 TNYPAGLFFQH-AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 229 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...+ ......+..+.++|++..++++.+. -..-+.+..||+.
T Consensus 362 -------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss----~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 362 -------VREVALPGLGSVSGFNGKHDDPALYFGFEN----YAQPPTLYRFEPK 404 (693)
T ss_dssp -------EEEECCSSSSEEEECCCCTTCSCEEEEEEC----SSSCCEEEEECTT
T ss_pred -------eEEeecCCCceEEeeecCCCCCEEEEEecC----CCCCCEEEEEECC
Confidence 1111 1233456777888888877766542 2234678888875
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=2.8e-08 Score=80.17 Aligned_cols=149 Identities=12% Similarity=-0.008 Sum_probs=94.8
Q ss_pred EEEEEecCCCcEEEEEc-------------------CCCeEEEEEcCCCCcceEEEeecc-C-CceeEEEe--ccCCCCe
Q 021657 95 EDVTFCPSSAQEFCSVG-------------------DDSCLILWDARVGTSPVIKVEKAH-D-ADLHCVDW--NPLDDNL 151 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~-~-~~v~~~~~--~~~~~~~ 151 (309)
..+.|+|++ +.+++.. ...+|.+||+.+++ ....+... . .....+.| +| ++++
T Consensus 191 Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg~~g~~P~~i~f~~~P-dg~~ 266 (462)
T 2ece_A 191 YDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLGEENRMALELRPLHDP-TKLM 266 (462)
T ss_dssp CCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESCTTEEEEEEEEECSST-TCCE
T ss_pred ceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecCCCCCccceeEeeECC-CCCE
Confidence 467889998 6677663 36899999998765 44444432 1 23445555 99 8887
Q ss_pred EEEEc------CCCcEEEEecCCCCCCCCCCceeee--c----------------cCCCCeeEEEEecCCCcEEEEecCC
Q 021657 152 ILTGS------ADNSVRMFDRRNLTSNGVGSPINKF--E----------------GHSAAVLCVQWSPDKSSVFGSSAED 207 (309)
Q Consensus 152 l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~--~----------------~~~~~v~~~~~~~~~~~l~~~~~~d 207 (309)
++++. .+++|.+|...... .+..+.+ . +.......|.+++||++|+++.-..
T Consensus 267 aYV~~e~~~~~Lss~V~v~~~d~g~----~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 267 GFINMVVSLKDLSSSIWLWFYEDGK----WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp EEEEEEEETTTCCEEEEEEEEETTE----EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT
T ss_pred EEEEEeeeccCCCceEEEEEecCCc----eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC
Confidence 77666 56688776654310 1111111 0 0024577899999999999888889
Q ss_pred CcEEEEeCCcccccccCCCCCcCCCCceeeeecCC--------------CcceeeEEEccCCCeEEEEec
Q 021657 208 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH--------------RDKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 208 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~~s~s 263 (309)
+.|.+||+...+.. ..+...... ...-..+.++|++.+++++.+
T Consensus 343 d~VavfdV~d~~~~------------~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 343 GEVRQYDISNPFKP------------VLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp TEEEEEECSSTTSC------------EEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred CEEEEEEecCCCCc------------EEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 99999999743221 111111111 113578999999999998763
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.05 E-value=3e-07 Score=68.30 Aligned_cols=195 Identities=10% Similarity=0.008 Sum_probs=118.2
Q ss_pred ceEEEEECCCCCEEEEecCCC--cEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDK--SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (309)
-...+.|++ +.++.+.+.+| .|+++|++++....... +.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~--------------------------------------l~ 62 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE--------------------------------------VP 62 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE--------------------------------------CC
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe--------------------------------------CC
Confidence 467899986 56666766654 89999998653322111 01
Q ss_pred cccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 89 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 89 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
.+ .--..+... +.+++...-.++.+.+||..+.+ ....+.... .-..++ + ++..|+.+..++.|.++|..+
T Consensus 63 ~~-~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~--~~~ti~~~~-~Gwglt--~-dg~~L~vSdgs~~l~~iDp~t 133 (243)
T 3mbr_X 63 PP-YFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT--PRARFRYPG-EGWALT--S-DDSHLYMSDGTAVIRKLDPDT 133 (243)
T ss_dssp TT-CCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE--EEEEEECSS-CCCEEE--E-CSSCEEEECSSSEEEEECTTT
T ss_pred CC-cceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc--EEEEEeCCC-CceEEe--e-CCCEEEEECCCCeEEEEeCCC
Confidence 11 011233443 33667777789999999998887 555554433 234555 4 566666666789999999998
Q ss_pred CCCCCCCCceeeeccCC-----CCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC
Q 021657 169 LTSNGVGSPINKFEGHS-----AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR 243 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
.+.+.++.... ..++-+.+. +|+ +++..-.+..|.+.|.++ ++.........-.+... .......
T Consensus 134 ------~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~-~~~~~~~ 203 (243)
T 3mbr_X 134 ------LQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDAD-ALTDSTN 203 (243)
T ss_dssp ------CCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTT-SCCCTTS
T ss_pred ------CeEEEEEEEccCCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCC-CCEEEEEECCcCccccc-cccCCcC
Confidence 77777765422 345666765 555 777766778999999887 33222111000000000 0001122
Q ss_pred cceeeEEEccCCCeEEEEec
Q 021657 244 DKVVDFHWNASDPWTVVSVS 263 (309)
Q Consensus 244 ~~v~~~~~~~~~~~~~~s~s 263 (309)
.-.+.|+++|++..+++++-
T Consensus 204 ~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 204 DVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp SCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEEcCCCCEEEEECC
Confidence 35689999999999998764
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.02 E-value=6.8e-08 Score=78.55 Aligned_cols=118 Identities=14% Similarity=0.048 Sum_probs=73.7
Q ss_pred cccccccccCCeEEEEEecCCCcEEEEEc---------CCCeEEEEEcCCCCcceEEEeecc-------CCceeEEEecc
Q 021657 83 PRGIYNGHEDTVEDVTFCPSSAQEFCSVG---------DDSCLILWDARVGTSPVIKVEKAH-------DADLHCVDWNP 146 (309)
Q Consensus 83 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~ 146 (309)
.+..+..-..+ .+.++|+++.++++.. .++.|.++|..+.+ ....+.-. ......+.++|
T Consensus 111 vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--vv~~I~v~g~~r~~~g~~P~~~~~sp 186 (426)
T 3c75_H 111 ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--PIADIELPDAPRFLVGTYQWMNALTP 186 (426)
T ss_dssp EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETTCCCCCBSCCGGGSEECT
T ss_pred EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--EEEEEECCCccccccCCCcceEEEcC
Confidence 33344333344 7999999955444432 46789999999888 44444321 23457899999
Q ss_pred CCCCeEEEEcC--CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 147 LDDNLILTGSA--DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 147 ~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
++++++++.. ++.|.++|+.+ .+.+.++..... ....|++...+++.+.||.+.+.+.
T Consensus 187 -DGk~lyV~n~~~~~~VsVID~~t------~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 187 -DNKNLLFYQFSPAPAVGVVDLEG------KTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp -TSSEEEEEECSSSCEEEEEETTT------TEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEEC
T ss_pred -CCCEEEEEecCCCCeEEEEECCC------CeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEEC
Confidence 9998888764 57899999999 777777764221 2233333333334444555444444
No 232
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.00 E-value=8.4e-08 Score=76.72 Aligned_cols=151 Identities=11% Similarity=0.025 Sum_probs=102.2
Q ss_pred EEECCCCCEEEEecC-----CCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 15 LAMCPTEPYVLSGGK-----DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 15 ~~~~~~~~~l~t~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
....|++..+..... ++.|.+.|..+. +.+..+..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~----------------------------------------~v~~~I~v 77 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG----------------------------------------RVIGMIDG 77 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT----------------------------------------EEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC----------------------------------------eEEEEEEC
Confidence 455789988776654 678999998743 33333433
Q ss_pred ccCCeEEEEEecCCCcEEEEEc---------CCCeEEEEEcCCCCcceEEEeecc-------CCceeEEEeccCCCCeEE
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVG---------DDSCLILWDARVGTSPVIKVEKAH-------DADLHCVDWNPLDDNLIL 153 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~ 153 (309)
-..+ . +.++|+|+.++++.. .++.|.+||..+.+ ....+.-. ......++++| ++++++
T Consensus 78 G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~ly 152 (386)
T 3sjl_D 78 GFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--PTADIELPDAPRFLVGTYPWMTSLTP-DGKTLL 152 (386)
T ss_dssp CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETTCCCCCBSCCGGGEEECT-TSSEEE
T ss_pred CCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--EEEEEECCCccccccCCCCceEEEcC-CCCEEE
Confidence 3344 3 999999954444432 36789999999887 44444321 12467899999 999888
Q ss_pred EEcC--CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccc
Q 021657 154 TGSA--DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 220 (309)
Q Consensus 154 ~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~ 220 (309)
++.. ++.|.++|+.+ .+.+.++.... . ..+.|.+...+++.+.||.+.+.++...++
T Consensus 153 Van~~~~~~VsVID~~t------~~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~ 211 (386)
T 3sjl_D 153 FYQFSPAPAVGVVDLEG------KAFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 211 (386)
T ss_dssp EEECSSSCEEEEEETTT------TEEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred EEEcCCCCeEEEEECCC------CcEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence 7764 68999999999 88888886422 1 223354443455777789988888876333
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.96 E-value=2.2e-08 Score=87.09 Aligned_cols=153 Identities=12% Similarity=0.049 Sum_probs=90.8
Q ss_pred CCCEEEEecCCCcEEEEeCCccccccccCCc-c-----cc--ccCCCCceeecCCCC----CCCCcccCCCCCcCccccc
Q 021657 20 TEPYVLSGGKDKSVVLWSIQDHITSSATDPA-T-----AK--SAGSSGSIIKQSPKP----GDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 20 ~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~-~-----~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 87 (309)
++..++.++.|+.|..+|.+++......... . .. .+........+.... .++.+..++..+++.+..+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3567888899999999999888554433321 0 00 000011112222111 2466777777777665444
Q ss_pred cccc--------------------------------CCeEEEEEecCCCcEEEEEcCCC-------------------eE
Q 021657 88 NGHE--------------------------------DTVEDVTFCPSSAQEFCSVGDDS-------------------CL 116 (309)
Q Consensus 88 ~~~~--------------------------------~~v~~~~~~~~~~~~l~s~~~dg-------------------~i 116 (309)
.... .....+.++|++ .+++.+..++ .|
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 3211 112357888887 5666666554 59
Q ss_pred EEEEcCCCCcceEEEeec--cC-------CceeEEEeccCCC---CeEEEEcCCCcEEEEecCCCCCCCCCCceeeec
Q 021657 117 ILWDARVGTSPVIKVEKA--HD-------ADLHCVDWNPLDD---NLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182 (309)
Q Consensus 117 ~iwd~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 182 (309)
..+|..+++ ..-.+.. |. .....+.... ++ ..++.++.+|.++++|.++ ++.+..+.
T Consensus 286 ~AlD~~TG~--~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~t------G~~l~~~~ 354 (677)
T 1kb0_A 286 VALDPDTGK--YKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTN------GKFISAKN 354 (677)
T ss_dssp EEECTTTCC--EEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTT------CCEEEEEE
T ss_pred EEEECCCCC--EEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCC------CCEecccc
Confidence 999999988 3333322 21 1122223333 55 6889999999999999999 77776554
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.94 E-value=1.2e-07 Score=82.61 Aligned_cols=149 Identities=10% Similarity=0.076 Sum_probs=87.7
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCc-c-----cc--ccCCCCceeecCCC----CCCCCcccCCCCCcCcccccc
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPA-T-----AK--SAGSSGSIIKQSPK----PGDGNDKAADGPSVGPRGIYN 88 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~-~-----~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 88 (309)
+..++.++.|+.|..+|.+++......... . .. .+........+... ..++.+..++..+++.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 567888999999999999988554433221 0 00 00000111112111 124667777777776654432
Q ss_pred c-------------------------------ccCCeEEEEEecCCCcEEEEEcCCCe-------------------EEE
Q 021657 89 G-------------------------------HEDTVEDVTFCPSSAQEFCSVGDDSC-------------------LIL 118 (309)
Q Consensus 89 ~-------------------------------~~~~v~~~~~~~~~~~~l~s~~~dg~-------------------i~i 118 (309)
. +......+.++|++ .+++.+..++. |..
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 1 11111257888877 67777877764 999
Q ss_pred EEcCCCCcceEEEeec--cC-------CceeEEEeccCCCC---eEEEEcCCCcEEEEecCCCCCCCCCCcee
Q 021657 119 WDARVGTSPVIKVEKA--HD-------ADLHCVDWNPLDDN---LILTGSADNSVRMFDRRNLTSNGVGSPIN 179 (309)
Q Consensus 119 wd~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 179 (309)
+|..+++ ..-.+.. |. .++....... ++. .++.++.+|.++++|.++ ++.+.
T Consensus 280 lD~~TG~--~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~t------G~~l~ 343 (689)
T 1yiq_A 280 VNADTGE--YVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRAT------GELLS 343 (689)
T ss_dssp EETTTCC--EEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTT------CCEEE
T ss_pred EEccCCc--eeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCC------CCEec
Confidence 9999998 3433332 21 1111122222 444 788999999999999998 77663
No 235
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.93 E-value=3e-06 Score=67.63 Aligned_cols=116 Identities=5% Similarity=-0.037 Sum_probs=80.7
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-CcEEEEecCCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-NSVRMFDRRNLTS 171 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~ 171 (309)
....+++.+.++.++++-...+.|.+.++.... ..............++++|.++.++++-... +.|..+++..
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG--- 191 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--- 191 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS---
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc--eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC---
Confidence 456889988665777787788899999986544 2233333345678999998445555555555 7888888764
Q ss_pred CCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 172 NGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 172 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.....+ ...-...+.|+++|++..|+++-...+.|..+|+..
T Consensus 192 ----~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 192 ----SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp ----CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ----CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 222233 223345789999998888888878888999999875
No 236
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.91 E-value=1.5e-06 Score=70.32 Aligned_cols=155 Identities=5% Similarity=-0.077 Sum_probs=97.8
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-CcEEEEecCCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-NSVRMFDRRNLTS 171 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~ 171 (309)
....+++.+.++.++++-...+.|.+.++.... ..............++++|..+.++++-... +.|..+++..
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~--~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--- 234 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--- 234 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCS--CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS---
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc--eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC---
Confidence 346788887665777777778889998886444 2333333345678999998344455554444 7888888764
Q ss_pred CCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 172 NGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 172 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
.....+ ...-...+.|+++|++..|+++-...+.|..+|+...... .+ ..........++
T Consensus 235 ----~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-------------~~--~~~~~~~P~gia 295 (386)
T 3v65_B 235 ----SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK-------------AV--ISQGLPHPFAIT 295 (386)
T ss_dssp ----CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE-------------EE--ECSSCSSEEEEE
T ss_pred ----CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE-------------EE--EECCCCCceEEE
Confidence 222233 2234457899999988888888888889999998641111 11 111223456777
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRM 280 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~ 280 (309)
+. +..++.+-... +.|..++.
T Consensus 296 v~--~~~ly~td~~~-------~~V~~~~~ 316 (386)
T 3v65_B 296 VF--EDSLYWTDWHT-------KSINSANK 316 (386)
T ss_dssp EE--TTEEEEEETTT-------TEEEEEET
T ss_pred EE--CCEEEEeeCCC-------CeEEEEEC
Confidence 73 44666654433 67777774
No 237
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.90 E-value=3e-06 Score=66.39 Aligned_cols=197 Identities=14% Similarity=0.055 Sum_probs=116.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
....++|+++++++++-..++.|..||.+.... ..+ ..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-----------------------------------------~~~-~~ 70 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-----------------------------------------IHA-TV 70 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-----------------------------------------EEE-EC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCceE-----------------------------------------EEE-eC
Confidence 357899999999888877889999998763210 000 11
Q ss_pred cCCeEEEEEecCCCcEEEEEcC-CC-eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGD-DS-CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~-dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
......+++.+++ +++++... ++ .|..+|..+++....... ........++..+ ++..+++-..++.|+.+|...
T Consensus 71 ~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 71 EGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVETLLTL-PDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp SSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEEEEEC-TTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTT
T ss_pred CCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCeEEEEEeC-CCccccCcccccC-CCcEEEEECCCCeEEEEeCCC
Confidence 2357889999998 55555433 22 477777777662111111 1122334555555 555555555688999999764
Q ss_pred CCCCCCCC-cee---------eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 169 LTSNGVGS-PIN---------KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 169 ~~~~~~~~-~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
++ .+. .....-...+.| ++++.+++++-...+.|..|++...+... ....+..
T Consensus 148 ------~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~---------~~~~~~~ 210 (306)
T 2p4o_A 148 ------PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG---------EPEIFVE 210 (306)
T ss_dssp ------TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC---------CCEEEEE
T ss_pred ------CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC---------ccEEEec
Confidence 21 111 000111234555 88888888888888999999987522110 0111111
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
. .....+++++++.. +++... .+.|.+++..
T Consensus 211 ~----~~P~gi~vd~dG~l-~va~~~-------~~~V~~~~~~ 241 (306)
T 2p4o_A 211 Q----TNIDDFAFDVEGNL-YGATHI-------YNSVVRIAPD 241 (306)
T ss_dssp S----CCCSSEEEBTTCCE-EEECBT-------TCCEEEECTT
T ss_pred c----CCCCCeEECCCCCE-EEEeCC-------CCeEEEECCC
Confidence 1 34577899998864 443332 2688888865
No 238
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.88 E-value=7e-06 Score=64.56 Aligned_cols=203 Identities=4% Similarity=-0.086 Sum_probs=120.4
Q ss_pred eEEEEECCCCC-EEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 12 EFALAMCPTEP-YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 12 V~~~~~~~~~~-~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+.+++|++++. ++++-...+.|..+++...... ......+...
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~------------------------------------~~~~~~~~~~ 75 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------------------------------------SSYDTVISRD 75 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------------------------------------------CEEEECSS
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC------------------------------------cccEEEEeCC
Confidence 45889988654 4556666788888887631000 0000011111
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-CcEEEEecCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-NSVRMFDRRNL 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 169 (309)
-.....+++.+.++.++++-...+.|.+.++.... ..............++++|..+.++++.... +.|..+++..
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~--~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG- 152 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG- 152 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc--eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-
Confidence 23457889987654777777788999999986543 2223333345678999998344444444333 6888888763
Q ss_pred CCCCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceee
Q 021657 170 TSNGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVD 248 (309)
Q Consensus 170 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 248 (309)
.....+ ...-...+.|++++++..|+++-...+.|..+|+..... ..+............
T Consensus 153 ------~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-------------~~~~~~~~~~~~P~g 213 (316)
T 1ijq_A 153 ------VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------------KTILEDEKRLAHPFS 213 (316)
T ss_dssp ------CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------------EEEEECTTTTSSEEE
T ss_pred ------CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-------------EEEeecCCccCCcEE
Confidence 333333 223356789999998888888888888999999874111 112111112234566
Q ss_pred EEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 249 FHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 249 ~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+++. +..++++-... +.|..++..
T Consensus 214 iav~--~~~ly~~d~~~-------~~V~~~~~~ 237 (316)
T 1ijq_A 214 LAVF--EDKVFWTDIIN-------EAIFSANRL 237 (316)
T ss_dssp EEEE--TTEEEEEETTT-------TEEEEEETT
T ss_pred EEEE--CCEEEEEECCC-------CeEEEEeCC
Confidence 7774 45666655443 778777764
No 239
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.86 E-value=1.1e-05 Score=64.30 Aligned_cols=160 Identities=8% Similarity=0.001 Sum_probs=108.2
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..+..++|++.++.++.+-...+.|..+++.... ..............+++++..++++++-...+.|.+.++..
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--- 147 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--- 147 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS---
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCC--ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC---
Confidence 3478999998765777777788999999987655 23333333345678899874566667767778999999875
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
......+...-...+.++++|.+.+|+.+-..+ +.|..+++...... .+ ....-...+.++
T Consensus 148 ---~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-------------~~--~~~~~~~PnGla 209 (349)
T 3v64_C 148 ---AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-------------II--ADTHLFWPNGLT 209 (349)
T ss_dssp ---CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-------------ES--CCSSCSCEEEEE
T ss_pred ---CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-------------EE--EECCCCCcceEE
Confidence 322222333335678999999877788776666 78888887652111 11 111233568999
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
++|++..|+++-+.. +.|..+++.
T Consensus 210 ~d~~~~~lY~aD~~~-------~~I~~~~~d 233 (349)
T 3v64_C 210 IDYAGRRMYWVDAKH-------HVIERANLD 233 (349)
T ss_dssp EETTTTEEEEEETTT-------TEEEEEETT
T ss_pred EeCCCCEEEEEECCC-------CEEEEEeCC
Confidence 999888888765544 788888876
No 240
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.85 E-value=2.1e-05 Score=63.97 Aligned_cols=160 Identities=3% Similarity=-0.106 Sum_probs=100.7
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-CCcEEEEecCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLT 170 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~ 170 (309)
.....+++.+.++.++++-...+.|.+.++.... ..............|+++|..+.++++-.. .+.|...++..
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~--~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG-- 234 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-- 234 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS--EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS--
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCc--eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC--
Confidence 4577899988555777787788999999987554 333333344567899999934444444322 37888888874
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
..........-...+.|++++++..|+++-...+.|..+|+..... ..+...........+++
T Consensus 235 ----~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-------------~~~~~~~~~l~~P~gl~ 297 (400)
T 3p5b_L 235 ----VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------------KTILEDEKRLAHPFSLA 297 (400)
T ss_dssp ----CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-------------EEEEECSSTTSSEEEEE
T ss_pred ----CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-------------EEEEeCCCCCCCCEEEE
Confidence 2222222333356789999998888887777788999999865111 11222112223345666
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.. +..++.+-... +.|..++..
T Consensus 298 v~--~~~lywtd~~~-------~~V~~~~~~ 319 (400)
T 3p5b_L 298 VF--EDKVFWTDIIN-------EAIFSANRL 319 (400)
T ss_dssp EE--TTEEEEEESSS-------CSEEEEESS
T ss_pred Ee--CCEEEEecCCC-------CeEEEEEcC
Confidence 63 45666655443 677777744
No 241
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.84 E-value=5.5e-06 Score=67.10 Aligned_cols=160 Identities=8% Similarity=-0.007 Sum_probs=108.1
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..+..++|++.++.++++-...+.|..+++.... ..............+++++..+.++++-...+.|.+.++..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg--- 190 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--- 190 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS---
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC---
Confidence 4578999998765777777788999999987655 33333333345678888874566667766778899988875
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
......+...-.....|++.|.+.+|+++-..+ +.|..+++..... ..+ ....-...+.|+
T Consensus 191 ---~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-------------~~~--~~~~~~~PnGla 252 (386)
T 3v65_B 191 ---AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-------------RII--ADTHLFWPNGLT 252 (386)
T ss_dssp ---CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-------------EEE--ECSSCSCEEEEE
T ss_pred ---CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-------------EEE--EECCCCCeeeEE
Confidence 332223333335678999999888788776655 7788888764111 011 112233568999
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
|+|++..|+++-+.. +.|..+++.
T Consensus 253 vd~~~~~lY~aD~~~-------~~I~~~d~d 276 (386)
T 3v65_B 253 IDYAGRRMYWVDAKH-------HVIERANLD 276 (386)
T ss_dssp EEGGGTEEEEEETTT-------TEEEEECTT
T ss_pred EeCCCCEEEEEECCC-------CEEEEEeCC
Confidence 999888888765544 788888876
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.82 E-value=5.4e-07 Score=75.39 Aligned_cols=168 Identities=11% Similarity=0.067 Sum_probs=105.6
Q ss_pred CCeEEEEE-e-cCCCcEEEEE------------------cCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCe
Q 021657 92 DTVEDVTF-C-PSSAQEFCSV------------------GDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 151 (309)
Q Consensus 92 ~~v~~~~~-~-~~~~~~l~s~------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 151 (309)
..+..+++ . |++ .+++++ -.++.+.+.|..+.+ ....+.-.. ....++++| ++++
T Consensus 134 ~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~--v~~qI~Vgg-~pd~~~~sp-dGk~ 208 (595)
T 1fwx_A 134 KGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE--VAWQVLVSG-NLDNCDADY-EGKW 208 (595)
T ss_dssp CSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE--EEEEEEESS-CCCCEEECS-SSSE
T ss_pred CCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccCceEEEEECCCCe--EEEEEEeCC-CccceEECC-CCCE
Confidence 34667777 4 777 444444 235689999998766 444433222 456788999 8888
Q ss_pred EEEEcCCC--------------------------------------cEEEEecCCCCCCCCCCc-eeeeccCCCCeeEEE
Q 021657 152 ILTGSADN--------------------------------------SVRMFDRRNLTSNGVGSP-INKFEGHSAAVLCVQ 192 (309)
Q Consensus 152 l~~~~~dg--------------------------------------~i~i~d~~~~~~~~~~~~-~~~~~~~~~~v~~~~ 192 (309)
+++.+.+. .|.+.|.++.. ++. +..+... ....++.
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~----~~~~~~~Ipvg-~~PhGv~ 283 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEA----SSLFTRYIPIA-NNPHGCN 283 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGG----CCSSEEEEEEE-SSCCCEE
T ss_pred EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccC----CceeEEEEecC-CCceEEE
Confidence 88877543 35566665411 122 3344322 2456799
Q ss_pred EecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCC
Q 021657 193 WSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGG 272 (309)
Q Consensus 193 ~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~d 272 (309)
++|||+++++++..+.+|.++|+.+........ ........... .-......++|+|++ +++++.-.|
T Consensus 284 ~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~---l~~~~~v~~~v-~vG~gP~h~aF~~dG-~aY~t~~ld------- 351 (595)
T 1fwx_A 284 MAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN---ADPRSAVVAEP-ELGLGPLHTAFDGRG-NAYTSLFLD------- 351 (595)
T ss_dssp ECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC---CCGGGGEEECC-BCCSCEEEEEECTTS-EEEEEETTT-------
T ss_pred EcCCCCEEEEeCCCCCeEEEEECcccccccccc---cCcccceEEEc-CCCCCcceEEECCCC-eEEEEEecC-------
Confidence 999999999999999999999999632110000 00001111122 223457889999999 777766655
Q ss_pred CeEEEEEcc
Q 021657 273 GTLQIWRMS 281 (309)
Q Consensus 273 g~v~vw~~~ 281 (309)
+.|.+||+.
T Consensus 352 sqV~kwdi~ 360 (595)
T 1fwx_A 352 SQVVKWNIE 360 (595)
T ss_dssp TEEEEEEHH
T ss_pred CcEEEEEhh
Confidence 999999998
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.80 E-value=3.9e-07 Score=72.85 Aligned_cols=187 Identities=11% Similarity=0.023 Sum_probs=106.2
Q ss_pred EEEEECCCCCEEEEecC--CCcEEE--EeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCC-----cCc
Q 021657 13 FALAMCPTEPYVLSGGK--DKSVVL--WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS-----VGP 83 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~--dg~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 83 (309)
..++|+|||++|+++.. +..|.+ +|+.+ ...............+.. ... ....++.+...+..+ .+.
T Consensus 127 ~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-v~~i~v~~~~~~~p~g~~--~~~-~~~~dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASD-DQLTKSASCFHIHPGAAA--THY-LGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp TSEEECTTSSCEEEEECSSSCEEEEEETTTEE-EEEEECSSCCCCEEEETT--EEE-CCCCTTSCEEEECCSSCCCCEEC
T ss_pred ceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-ceEEECCCceEEccCCCe--EEE-EEcCCCCEEEEECccccccCCeE
Confidence 47899999999998864 467888 99876 111111100000111111 111 112233333333332 111
Q ss_pred c----cccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec----------cCCceeEEEeccCCC
Q 021657 84 R----GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA----------HDADLHCVDWNPLDD 149 (309)
Q Consensus 84 ~----~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~ 149 (309)
. ..+.-...+. . .++++.++++ +. +.|.+.|+..........+.. .......++++| ++
T Consensus 203 ~~~~t~~i~vg~~P~---~-~~~~~~~~~v-s~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~-dg 275 (368)
T 1mda_H 203 GAQCTGAQNCSSQAA---Q-ANYPGMLVWA-VA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK-NT 275 (368)
T ss_dssp CCCSCTTSCBCSCCE---E-ETTTTEEEEC-BS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET-TT
T ss_pred EEEeeeeeeCCCCcc---c-cccCCEEEEE-cC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC-CC
Confidence 1 1111122333 3 5666354444 44 899999986543212221110 011222378999 77
Q ss_pred CeEEEEcC---------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEec-CCCcEEEEeCCc
Q 021657 150 NLILTGSA---------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA-EDGLLNIWDYEK 217 (309)
Q Consensus 150 ~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~dg~i~iwd~~~ 217 (309)
+.++++.. ++.+.++|+.+ .+.+.++.... ....|+|+|||++++++.. .++.|.++|+.+
T Consensus 276 ~~lyV~~~~~~~~~~~~~~~~~ViD~~t------~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 276 DGIMILTVEHSRSCLAAAENTSSVTASV------GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSS------CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred CEEEEEeccccCcccccCCCEEEEECCC------CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 77766532 23566999999 78888886443 5789999999998777777 699999999998
No 244
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.75 E-value=2.4e-05 Score=61.52 Aligned_cols=115 Identities=3% Similarity=-0.056 Sum_probs=79.0
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc--CCCcEEEEecCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS--ADNSVRMFDRRNLT 170 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~ 170 (309)
....+++.+.++.++++-...+.|.++++.... ..............++++| .+..|+... ..+.|..+++..
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--~~~l~~~~~~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG-- 154 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL--RKVLFWQELDQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDG-- 154 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSSEEEEEEEG-GGTEEEEEECSSSCEEEEEETTS--
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCc--EEEEEeCCCCCccEEEEeC-CCCEEEEEecCCCCEEEEEEcCC--
Confidence 456889987665777777778899999986544 2222323445678999998 544444443 357888888763
Q ss_pred CCCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 171 SNGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 171 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.....+ ...-...+.|++++++..|+++-...+.|..+|+..
T Consensus 155 -----~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 155 -----SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp -----CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -----CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 222232 223345789999998887888878889999999874
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.74 E-value=2.6e-07 Score=73.11 Aligned_cols=179 Identities=16% Similarity=0.099 Sum_probs=105.8
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccC---CCCceeecCCCCCCCCcccCCCCCcCccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAG---SSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 87 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (309)
.+.++...+++. |..++.+ |..+|. ++............... ....+. .+...+.+..++.. .+.....
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~---v~t~~~~l~~~d~~-g~~~~~~ 132 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILY---VTSMDGHLYAINTD-GTEKWRF 132 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEE---EECTTSEEEEECTT-SCEEEEE
T ss_pred cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEE---EEecCCEEEEEcCC-CCEEEEE
Confidence 456677776665 4445554 888886 33222222111100000 011111 12234455566655 4444444
Q ss_pred ccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 88 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 88 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
......+.++...+++ . +..++.++.|..+|.. ++ ...........+.++...+ ++.++ .++ +.|..+| .
T Consensus 133 ~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~d~-~g~l~-v~t--~~l~~~d-~ 202 (330)
T 3hxj_A 133 KTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GT--EKWRFKTNDAITSAASIGK-DGTIY-FGS--DKVYAIN-P 202 (330)
T ss_dssp ECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SC--EEEEEECSSCCCSCCEECT-TCCEE-EES--SSEEEEC-T
T ss_pred cCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CC--EeEEEecCCCceeeeEEcC-CCEEE-EEe--CEEEEEC-C
Confidence 4444456666776666 4 6667788999999987 65 4444444456677888876 66644 444 7899999 5
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
+ ++.+..+......+.++...++|. ++ .++.++.+..+|.
T Consensus 203 ~------g~~~~~~~~~~~~~~~~~~~~~g~-l~-v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 203 D------GTEKWNFYAGYWTVTRPAISEDGT-IY-VTSLDGHLYAINP 242 (330)
T ss_dssp T------SCEEEEECCSSCCCSCCEECTTSC-EE-EEETTTEEEEECT
T ss_pred C------CcEEEEEccCCcceeceEECCCCe-EE-EEcCCCeEEEECC
Confidence 5 666766665566788889998886 44 5666788888874
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.73 E-value=8.5e-07 Score=70.12 Aligned_cols=213 Identities=9% Similarity=-0.007 Sum_probs=125.1
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCc----cccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEE
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPA----TAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVED 96 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 96 (309)
+..|..++.++.|..+|.+ +......... ..........+.. +..++.+..++.. .+....+......+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v---gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV---GSNDNYLYAINPD-GTEKWRFKTNDAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE---ECTTSEEEEECTT-SCEEEEEECSSCCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE---EcCCCEEEEECCC-CCEeEEEecCCCceee
Confidence 4567788889999999987 4322211111 0011111111111 2233556666666 5544444444556677
Q ss_pred EEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCC
Q 021657 97 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 176 (309)
Q Consensus 97 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 176 (309)
+...+++ . +..++ +.|..+| .+++ ...........+.++...+ ++. +..++.++.+..+|. + ++
T Consensus 182 ~~~d~~g-~-l~v~t--~~l~~~d-~~g~--~~~~~~~~~~~~~~~~~~~-~g~-l~v~t~~~gl~~~~~-~------g~ 245 (330)
T 3hxj_A 182 ASIGKDG-T-IYFGS--DKVYAIN-PDGT--EKWNFYAGYWTVTRPAISE-DGT-IYVTSLDGHLYAINP-D------GT 245 (330)
T ss_dssp CEECTTC-C-EEEES--SSEEEEC-TTSC--EEEEECCSSCCCSCCEECT-TSC-EEEEETTTEEEEECT-T------SC
T ss_pred eEEcCCC-E-EEEEe--CEEEEEC-CCCc--EEEEEccCCcceeceEECC-CCe-EEEEcCCCeEEEECC-C------CC
Confidence 7777776 4 44444 7799999 5665 3444444456688888887 554 555666788888874 3 55
Q ss_pred ceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCC
Q 021657 177 PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDP 256 (309)
Q Consensus 177 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 256 (309)
.+..+......+..+.+.+++. ++ .++.+|.+..+|. . ++ .+..+......+.++...+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~g~-l~-v~t~~ggl~~~d~-~-g~--------------~~~~~~~~~~~~~~~~~d~~g~ 307 (330)
T 3hxj_A 246 EKWRFKTGKRIESSPVIGNTDT-IY-FGSYDGHLYAINP-D-GT--------------EKWNFETGSWIIATPVIDENGT 307 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTSC-EE-EECTTCEEEEECT-T-SC--------------EEEEEECSSCCCSCCEECTTCC
T ss_pred EeEEeeCCCCccccceEcCCCe-EE-EecCCCCEEEECC-C-Cc--------------EEEEEEcCCccccceEEcCCCE
Confidence 6666654444455666766775 44 7777888999985 3 22 2222333345567777777665
Q ss_pred eEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 257 WTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 257 ~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
++ .|+.+|.+++....
T Consensus 308 -l~--------~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 308 -IY--------FGTRNGKFYALFNL 323 (330)
T ss_dssp -EE--------EECTTSCEEEEEC-
T ss_pred -EE--------EEcCCCeEEEEecc
Confidence 44 33445899988876
No 247
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.73 E-value=4.1e-05 Score=60.18 Aligned_cols=161 Identities=9% Similarity=-0.056 Sum_probs=104.2
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC---CcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG---TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
.....+.|++.++.++++-..++.|..+++... .. ........-.....+++++.+++++++-...+.|.++|+..
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~-~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc-cEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 457899999876577778778899999998751 21 22222222245678999863555666667788999999874
Q ss_pred CCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
......+...-.....+++.|.+.+++++.... +.|..+++..... ..+ ....-....
T Consensus 109 ------~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-------------~~~--~~~~~~~P~ 167 (316)
T 1ijq_A 109 ------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-------------YSL--VTENIQWPN 167 (316)
T ss_dssp ------SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-------------EEE--ECSSCSCEE
T ss_pred ------CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-------------EEE--EECCCCCce
Confidence 222222222335678999999877777666544 7788887754111 011 112234578
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.++++|++..++++-+.. +.|..+|+.
T Consensus 168 gla~d~~~~~lY~~D~~~-------~~I~~~d~d 194 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKL-------HSISSIDVN 194 (316)
T ss_dssp EEEEETTTTEEEEEETTT-------TEEEEEETT
T ss_pred EEEEeccCCEEEEEECCC-------CeEEEEecC
Confidence 999999888888765544 788888886
No 248
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.71 E-value=4.1e-06 Score=73.99 Aligned_cols=158 Identities=15% Similarity=0.062 Sum_probs=89.6
Q ss_pred ceEEEEEC-CCCCEEEEec-CC----CcEEEEeCCcc-ccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCc
Q 021657 11 AEFALAMC-PTEPYVLSGG-KD----KSVVLWSIQDH-ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 83 (309)
Q Consensus 11 ~V~~~~~~-~~~~~l~t~~-~d----g~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (309)
.+...+|| |||++||-+. .+ .+|+++|+.++ ...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--------------------------------------- 215 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--------------------------------------- 215 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC---------------------------------------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC---------------------------------------
Confidence 46789999 9999887432 22 35999999754 210
Q ss_pred ccccccccCCeEEEEEecCCCcEEEEEcCC----CeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCCCCeEEEEcC-
Q 021657 84 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDD----SCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTGSA- 157 (309)
Q Consensus 84 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~- 157 (309)
...+.. ....+.|+|+++.++++.... ..|.++++.++.......+. ........+.|+| ++++|+....
T Consensus 216 ~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~ 291 (751)
T 2xe4_A 216 ADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQS 291 (751)
T ss_dssp CCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEEC
T ss_pred CccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecC
Confidence 000111 134678999995555554321 36888888765422223322 2233456889999 8988776553
Q ss_pred --CCcEEEEecCCCCCCCCCCc-eeee-ccCCCCeeEEEEecCCCcEEEEecCC--C--cEEEEeCC
Q 021657 158 --DNSVRMFDRRNLTSNGVGSP-INKF-EGHSAAVLCVQWSPDKSSVFGSSAED--G--LLNIWDYE 216 (309)
Q Consensus 158 --dg~i~i~d~~~~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~d--g--~i~iwd~~ 216 (309)
...|+++|+.+.. ... +..+ ........++.|+. |..+++....+ + .|..+|+.
T Consensus 292 ~~~~~l~~~d~~~~~----~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 292 PETAEVHLLDLRKGN----AHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp SSCEEEEEEESSSCT----TCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETT
T ss_pred CCCceEEEEECCCCC----CCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCC
Confidence 3468888987621 122 1333 22334455555544 55555555544 3 45555554
No 249
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.71 E-value=8.2e-10 Score=89.04 Aligned_cols=137 Identities=14% Similarity=0.068 Sum_probs=70.2
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccC
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGH 184 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 184 (309)
..+++++.||.|+.||..+++ ..-.+.. ..+.+..+.. ++..+++++.||.|+.||..+ ++.+..+..+
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~--~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~t------G~~~w~~~~~ 78 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGS--IKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKN------NEGLTKLPFT 78 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCC--EEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----------CCSEECSCC
T ss_pred CEEEEEcCCCEEEEEECCCCC--EEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCC------Cceeeeeecc
Confidence 578889999999999999998 4444443 4555555556 677888888999999999988 6666555432
Q ss_pred CC-Cee-EEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEe
Q 021657 185 SA-AVL-CVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSV 262 (309)
Q Consensus 185 ~~-~v~-~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~ 262 (309)
.. .+. +..+..++ . +++++.|+.++.||.++ ++. +..+..+. ...++|++..++ ++
T Consensus 79 ~~~~~~~sp~~~~~~-~-v~~g~~dg~v~a~D~~t-G~~--------------~w~~~~~~----~~~~~p~~~~v~-~~ 136 (369)
T 2hz6_A 79 IPELVQASPCRSSDG-I-LYMGKKQDIWYVIDLLT-GEK--------------QQTLSSAF----ADSLSPSTSLLY-LG 136 (369)
T ss_dssp HHHHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------------------------EE-EE
T ss_pred CccccccCceEecCC-E-EEEEeCCCEEEEEECCC-CcE--------------EEEecCCC----cccccccCCEEE-EE
Confidence 11 010 11111233 3 44778899999999987 332 22222221 133456566555 33
Q ss_pred cCCCCCCCCCCeEEEEEcc
Q 021657 263 SDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 263 s~d~~s~~~dg~v~vw~~~ 281 (309)
+.| +.|+.||..
T Consensus 137 ~~d-------g~v~a~d~~ 148 (369)
T 2hz6_A 137 RTE-------YTITMYDTK 148 (369)
T ss_dssp EEE-------EEEECCCSS
T ss_pred ecC-------CEEEEEECC
Confidence 444 899999987
No 250
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.71 E-value=2.9e-06 Score=64.26 Aligned_cols=153 Identities=14% Similarity=0.081 Sum_probs=100.0
Q ss_pred eEEEEEecCCCcEEEEEcC--CCeEEEEEcCCCCcceEEEeec-cCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGD--DSCLILWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
...+.|++++ .++++.+. ++.|.+.|+.+++ ....... .......+++.. +...++.-.++.+.++|..+
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD~~t-- 95 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGK--VENIHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYDRRT-- 95 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCC--EEEEEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEETTT--
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCC--EEEEEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEECCC--
Confidence 5799999986 66666553 6899999999998 4444432 112223455543 45556666789999999998
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC---ccee
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR---DKVV 247 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~ 247 (309)
.+.+.++... .+ ....+++||..++++- .++.|.++|..+..... .+ ....+. ..++
T Consensus 96 ----~~v~~~i~~g-~~-~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~------------~I-~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 96 ----LSNIKNFTHQ-MK-DGWGLATDGKILYGSD-GTSILYEIDPHTFKLIK------------KH-NVKYNGHRVIRLN 155 (266)
T ss_dssp ----TEEEEEEECC-SS-SCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEE------------EE-ECEETTEECCCEE
T ss_pred ----CcEEEEEECC-CC-CeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEE------------EE-EECCCCcccccce
Confidence 8888888643 11 2345677888887655 58899999988732211 01 111111 2356
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+.|. ++ .+++....+ +.|.+-|...
T Consensus 156 ele~~-dg-~lyvn~~~~-------~~V~vID~~t 181 (266)
T 2iwa_A 156 ELEYI-NG-EVWANIWQT-------DCIARISAKD 181 (266)
T ss_dssp EEEEE-TT-EEEEEETTS-------SEEEEEETTT
T ss_pred eEEEE-CC-EEEEecCCC-------CeEEEEECCC
Confidence 78888 44 677765444 7999999983
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.69 E-value=1.2e-05 Score=63.38 Aligned_cols=229 Identities=10% Similarity=-0.021 Sum_probs=124.0
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEeCCccccc-cccC----------------------CccccccCC-CCceeecCCCC
Q 021657 13 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITS-SATD----------------------PATAKSAGS-SGSIIKQSPKP 68 (309)
Q Consensus 13 ~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~-~~~~----------------------~~~~~~~~~-~~~~~~~~~~~ 68 (309)
.+++|+++++++.++..++.|..|+..+.... .... ......... ...+......
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~- 100 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY- 100 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-
Confidence 57899999988888889999999998764221 1000 000011111 1111111111
Q ss_pred CCCCcccCCCCCcCcccccc----c-ccCCeEEEEEec-CCCcEEEEEcC-----------------CCeEEEEEcCCCC
Q 021657 69 GDGNDKAADGPSVGPRGIYN----G-HEDTVEDVTFCP-SSAQEFCSVGD-----------------DSCLILWDARVGT 125 (309)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~----~-~~~~v~~~~~~~-~~~~~l~s~~~-----------------dg~i~iwd~~~~~ 125 (309)
..+..++...... ..+. + .......+++.+ +| .++++-.. ++.|..+|..+++
T Consensus 101 --~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 101 --YHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp --TEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred --CCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 1244444433221 1111 1 113468899999 88 65555432 3678888876655
Q ss_pred cceEEEeeccCCceeEEEeccCCCCeEEEE-cCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEe
Q 021657 126 SPVIKVEKAHDADLHCVDWNPLDDNLILTG-SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 204 (309)
Q Consensus 126 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 204 (309)
..... ........++++| +++.|..+ ...+.|..|++..... + ....+....+ ...+++.++|. ++++.
T Consensus 177 --~~~~~-~~~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~---~-~~~~~~~~~g-P~gi~~d~~G~-l~va~ 246 (322)
T 2fp8_A 177 --TTLLL-KELHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKK---G-TAEVLVKIPN-PGNIKRNADGH-FWVSS 246 (322)
T ss_dssp --EEEEE-EEESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTT---T-CEEEEEECSS-EEEEEECTTSC-EEEEE
T ss_pred --EEEec-cCCccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcC---C-ccceEEeCCC-CCCeEECCCCC-EEEEe
Confidence 22221 2223456899999 88755544 5678999999875210 1 1122211223 77899999998 45454
Q ss_pred cC----------CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC----CcceeeEEEccCCCeEEEEecCCCCCCC
Q 021657 205 AE----------DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH----RDKVVDFHWNASDPWTVVSVSDDCDSTG 270 (309)
Q Consensus 205 ~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~s~s~d~~s~~ 270 (309)
.. .+.|..+|.. ++. +..+... ...+..+++. +..|+++...+
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~--G~~--------------~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~----- 303 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEF--GNI--------------LEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFH----- 303 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTT--SCE--------------EEEEECCTTTTTSCCCEEEEE--TTEEEEECSSC-----
T ss_pred cCcccccccCCCccEEEEECCC--CCE--------------EEEEECCCCCccccceEEEEe--CCEEEEeecCC-----
Confidence 33 3567777653 221 1111111 2345666663 45667654433
Q ss_pred CCCeEEEEEcc
Q 021657 271 GGGTLQIWRMS 281 (309)
Q Consensus 271 ~dg~v~vw~~~ 281 (309)
+.|..+++.
T Consensus 304 --~~i~~~~~~ 312 (322)
T 2fp8_A 304 --GSVGILVYD 312 (322)
T ss_dssp --SEEEEEEC-
T ss_pred --CceEEEecc
Confidence 799999987
No 252
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.68 E-value=3.7e-06 Score=73.38 Aligned_cols=82 Identities=6% Similarity=0.028 Sum_probs=54.9
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+|.|+.||+.+ ++.+.++..+. +...-.+...+. ++..++.||.++.||.++ .+.+.
T Consensus 454 ~g~l~A~D~~t------G~~~W~~~~~~-~~~~g~~~tagg-lvf~gt~dg~l~a~D~~t---------------G~~lw 510 (689)
T 1yiq_A 454 SGKLIAWDPVK------QQAAWEVPYVT-IFNGGTLSTAGN-LVFEGSADGRVIAYAADT---------------GEKLW 510 (689)
T ss_dssp EEEEEEEETTT------TEEEEEEEESS-SCCCCEEEETTT-EEEEECTTSEEEEEETTT---------------CCEEE
T ss_pred ceeEEEEECCC------CCeEeEccCCC-CccCccceECCC-EEEEECCCCcEEEEECCC---------------Cccce
Confidence 37799999999 88888876543 333335566666 455889999999999998 33444
Q ss_pred eecCCCc-ceeeEEEccCCCeEEEEe
Q 021657 238 QHAGHRD-KVVDFHWNASDPWTVVSV 262 (309)
Q Consensus 238 ~~~~~~~-~v~~~~~~~~~~~~~~s~ 262 (309)
.+..... ...-+.|..++..+++..
T Consensus 511 ~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 511 EQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred eeeCCCCcccCceEEEECCEEEEEEE
Confidence 4443322 224466777777666654
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.68 E-value=2.8e-06 Score=63.67 Aligned_cols=149 Identities=11% Similarity=0.076 Sum_probs=95.3
Q ss_pred eEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
...+.|+ ++ .++.+.+.+| .|+.+|+.+++ ........ .........+.++...++.-.++.+.+||..+
T Consensus 45 tqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgk--v~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t--- 116 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGK--TLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN--- 116 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCC--EEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTT---
T ss_pred cceEEEE-CC-EEEEECCCCCCceEEEEECCCCc--EEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECcc---
Confidence 4788888 55 7788887776 89999999998 44444332 23333223331345555555689999999999
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC--CC---cce
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG--HR---DKV 246 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~v 246 (309)
.+.+.++.... ....+++++..|+++- .++.|.++|..+... ...... .. ..+
T Consensus 117 ---~~~~~ti~~~~---eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v---------------~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 117 ---LRQVRSFNYDG---EGWGLTHNDQYLIMSD-GTPVLRFLDPESLTP---------------VRTITVTAHGEELPEL 174 (262)
T ss_dssp ---CCEEEEEECSS---CCCCEEECSSCEEECC-SSSEEEEECTTTCSE---------------EEEEECEETTEECCCE
T ss_pred ---CcEEEEEECCC---CceEEecCCCEEEEEC-CCCeEEEEcCCCCeE---------------EEEEEeccCCcccccc
Confidence 88888887533 2244557788776554 478899999887322 111111 11 234
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.+.|. +..+++..-.+ +.|.+.|..
T Consensus 175 NELe~~--~G~lyan~w~~-------~~I~vIDp~ 200 (262)
T 3nol_A 175 NELEWV--DGEIFANVWQT-------NKIVRIDPE 200 (262)
T ss_dssp EEEEEE--TTEEEEEETTS-------SEEEEECTT
T ss_pred ceeEEE--CCEEEEEEccC-------CeEEEEECC
Confidence 567776 34567655444 678888877
No 254
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.68 E-value=4.7e-06 Score=72.57 Aligned_cols=156 Identities=11% Similarity=0.099 Sum_probs=97.8
Q ss_pred cCCC--cEEEEEcCCCeEEEEEcCCCCcceEEEeeccC-----------Cce------------------------eEEE
Q 021657 101 PSSA--QEFCSVGDDSCLILWDARVGTSPVIKVEKAHD-----------ADL------------------------HCVD 143 (309)
Q Consensus 101 ~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~v------------------------~~~~ 143 (309)
.+|+ ..++.++.+|.|+++|..+++ .+....... .++ ..++
T Consensus 322 ~dG~~~~~l~~~~~~G~l~~lD~~tG~--~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a 399 (677)
T 1kb0_A 322 IAGKPRKVILHAPKNGFFFVLDRTNGK--FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMS 399 (677)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCC--EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCE
T ss_pred cCCcEeeEEEEECCCCEEEEEECCCCC--EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCce
Confidence 4552 568899999999999999988 332222110 011 2578
Q ss_pred eccCCCCeEEEEcC-------------------------------------------CCcEEEEecCCCCCCCCCCceee
Q 021657 144 WNPLDDNLILTGSA-------------------------------------------DNSVRMFDRRNLTSNGVGSPINK 180 (309)
Q Consensus 144 ~~~~~~~~l~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~ 180 (309)
++| +..++++... .|.|..||+.+ ++.+.+
T Consensus 400 ~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t------G~~~W~ 472 (677)
T 1kb0_A 400 FNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA------QKAAWS 472 (677)
T ss_dssp EET-TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT------TEEEEE
T ss_pred EcC-CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC------CcEEee
Confidence 888 6677766532 27899999998 888877
Q ss_pred eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC-CcceeeEEEccCCCeEE
Q 021657 181 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH-RDKVVDFHWNASDPWTV 259 (309)
Q Consensus 181 ~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~ 259 (309)
+.. ..++....+..++..+ +.++.||.+++||.++ .+.+..+... .....-+.|.+++..++
T Consensus 473 ~~~-~~~~~~g~~~~~g~~v-~~g~~dg~l~a~D~~t---------------G~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 473 VEH-VSPWNGGTLTTAGNVV-FQGTADGRLVAYHAAT---------------GEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEE-SSSCCCCEEEETTTEE-EEECTTSEEEEEETTT---------------CCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cCC-CCCCcCcceEeCCCEE-EEECCCCcEEEEECCC---------------CceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 763 3444555667777754 4788999999999998 3334444322 22234456667776665
Q ss_pred EEecC-C--------CCCCCCCCeEEEEEccc
Q 021657 260 VSVSD-D--------CDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 260 ~s~s~-d--------~~s~~~dg~v~vw~~~~ 282 (309)
+..+. . -......+.+..|.+..
T Consensus 536 ~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 536 SVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred EEeccCCccccccccccccCCCCeEEEEeccc
Confidence 54321 0 00011147888999874
No 255
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.67 E-value=3.4e-06 Score=70.67 Aligned_cols=164 Identities=9% Similarity=0.024 Sum_probs=102.8
Q ss_pred cCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEe-c-cCCCCeEEEEc------------------CCC
Q 021657 101 PSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDW-N-PLDDNLILTGS------------------ADN 159 (309)
Q Consensus 101 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~-~-~~~~~~l~~~~------------------~dg 159 (309)
+||+.++++...++.|.+.|+.+.+ ....+. ........+++ . | ++.++++++ .++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~--~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMK--CDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTE--EEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCce--EeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCc
Confidence 4775667777778889999999887 444322 22345788887 4 8 888888874 346
Q ss_pred cEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC--------------CcEEEEeCCcccccccCC
Q 021657 160 SVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED--------------GLLNIWDYEKVGKKVEQG 225 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d--------------g~i~iwd~~~~~~~~~~~ 225 (309)
.+.++|..+ .+.+.++.... ...-++++|+|+++++++... ..|.+.|...........
T Consensus 176 ~vtvID~~t------~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 176 VFTAVDADK------WEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp EEEEEETTT------TEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred eEEEEECCC------CeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 799999998 77777776433 456788999999987666443 235555544311100000
Q ss_pred CCCc-C------CC---Cce-eeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 226 PRTT-N------YP---AGL-FFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 226 ~~~~-~------~~---~~~-~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.... + .. ... +..... .....++.++||+.+++++...+ .+|.++|+..
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s-------~~VsVid~~~ 308 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLS-------PTVTVLDVTR 308 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTS-------SBEEEEEGGG
T ss_pred CeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCC-------CeEEEEECcc
Confidence 0000 0 00 001 111111 12457799999999999855544 8999999993
No 256
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.65 E-value=3.8e-05 Score=67.70 Aligned_cols=117 Identities=4% Similarity=-0.049 Sum_probs=81.9
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-CcEEEEecCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-NSVRMFDRRNLT 170 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~ 170 (309)
.....|++.+.+++++++-...+.|.+.++.... ..............|+++|..+.++++-... +.|...++..
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~--~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-- 546 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-- 546 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe--EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC--
Confidence 4567889988776788888888999999987544 2333333445688999999334455544333 6788888874
Q ss_pred CCCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 171 SNGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 171 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.....+ ...-...+.|++++.+..|+++-...+.|..+++..
T Consensus 547 -----~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 547 -----VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp -----CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -----CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 333333 333357889999988887887777778899998865
No 257
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.63 E-value=3.2e-06 Score=68.29 Aligned_cols=177 Identities=12% Similarity=0.062 Sum_probs=100.5
Q ss_pred CCCEEEEecCCCcEEEEeCCccccccccCCcccc--ccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCe---
Q 021657 20 TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK--SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTV--- 94 (309)
Q Consensus 20 ~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--- 94 (309)
++..++.++.++.|..+|.+++............ .+........ ....++.+..++..+++.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~--v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVL--IHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEE--EECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEE--EEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 4567888888999999999887544332221110 0000011111 12234566677776666655443322111
Q ss_pred --EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCC--c--------e-eEEEeccCCCCeEEEEcCCCcE
Q 021657 95 --EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA--D--------L-HCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 95 --~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~--------v-~~~~~~~~~~~~l~~~~~dg~i 161 (309)
...... + ..++.+..++.|..+|..+++ .......... . + ..... .+..++.++.++.+
T Consensus 180 ~~~~~~~~-~--~~v~~g~~~g~l~~~d~~tG~--~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 180 GESAPTTA-F--GAAVVGGDNGRVSAVLMEQGQ--MIWQQRISQATGSTEIDRLSDVDTTPVV---VNGVVFALAYNGNL 251 (376)
T ss_dssp CCCCCEEE-T--TEEEECCTTTEEEEEETTTCC--EEEEEECCC-----------CCCCCCEE---ETTEEEEECTTSCE
T ss_pred CCCCcEEE-C--CEEEEEcCCCEEEEEECCCCc--EEEEEecccCCCCcccccccccCCCcEE---ECCEEEEEecCcEE
Confidence 112222 2 357778889999999998887 3333221110 0 1 11111 24667777889999
Q ss_pred EEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 162 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
..+|.++ ++.+..... .....+... +..++ .++.++.+..+|..+
T Consensus 252 ~~~d~~t------G~~~w~~~~--~~~~~~~~~--~~~l~-~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 252 TALDLRS------GQIMWKREL--GSVNDFIVD--GNRIY-LVDQNDRVMALTIDG 296 (376)
T ss_dssp EEEETTT------CCEEEEECC--CCEEEEEEE--TTEEE-EEETTCCEEEEETTT
T ss_pred EEEECCC------CcEEeeccC--CCCCCceEE--CCEEE-EEcCCCeEEEEECCC
Confidence 9999998 777766652 234444443 44454 667789999999887
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.63 E-value=1.7e-06 Score=75.22 Aligned_cols=149 Identities=11% Similarity=0.094 Sum_probs=86.0
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCccc-----c--ccCCCCceeecCCCC----CCCCcccCCCCCcCccccccc
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATA-----K--SAGSSGSIIKQSPKP----GDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 89 (309)
+..++.++.|+.|..+|.+++........... . .+........+.... ..+.+..++..+++.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 45788888999999999998855443322100 0 000001111221111 245677777777666544421
Q ss_pred -------------------------------ccCCeEEEEEecCCCcEEEEEcCCC-------------------eEEEE
Q 021657 90 -------------------------------HEDTVEDVTFCPSSAQEFCSVGDDS-------------------CLILW 119 (309)
Q Consensus 90 -------------------------------~~~~v~~~~~~~~~~~~l~s~~~dg-------------------~i~iw 119 (309)
+......+++.|.+ .+++.+..++ .|..+
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11112246788876 5677777665 49999
Q ss_pred EcCCCCcceEEEeec--cC-------CceeEEEeccCCCC---eEEEEcCCCcEEEEecCCCCCCCCCCcee
Q 021657 120 DARVGTSPVIKVEKA--HD-------ADLHCVDWNPLDDN---LILTGSADNSVRMFDRRNLTSNGVGSPIN 179 (309)
Q Consensus 120 d~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 179 (309)
|..+++ ..-.+.. |. .+.....+.. +++ .++.++.+|.++++|.++ ++.+.
T Consensus 276 D~~tG~--~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~t------G~~l~ 338 (668)
T 1kv9_A 276 RPDTGK--LAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTN------GKLIS 338 (668)
T ss_dssp CTTTCC--EEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTT------CCEEE
T ss_pred cCCCCc--eeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCC------CCEec
Confidence 999998 3333322 22 2222222223 454 688899999999999998 77663
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.60 E-value=6.6e-06 Score=61.71 Aligned_cols=150 Identities=7% Similarity=-0.008 Sum_probs=96.0
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNG 173 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 173 (309)
...+.|+. + .++.+.+.+|.|+++|+.+++. .........---.+++. .+.++++.-.++.+.+||..+
T Consensus 57 tqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv--~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~T----- 125 (268)
T 3nok_A 57 TQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQP--VWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMP----- 125 (268)
T ss_dssp EEEEEEET-T-EEEEEETTTTEEEECCSSCSSC--SEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTT-----
T ss_pred cceEEEEC-C-EEEEEcCCCCEEEEEECCCCcE--EeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCc-----
Confidence 46888874 4 8888999999999999999984 33332211112335554 345666666789999999999
Q ss_pred CCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCC---cceeeEE
Q 021657 174 VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHR---DKVVDFH 250 (309)
Q Consensus 174 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~ 250 (309)
.+.+.++...... ..+++++..|+++- .++.|.++|..+...... + ....+. ..++.+.
T Consensus 126 -l~~~~ti~~~~eG---wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~------------I-~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 126 -PQRERTTRYSGEG---WGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGA------------V-QVKLRGQPVELINELE 187 (268)
T ss_dssp -TEEEEEEECSSCC---CCEEEETTEEEEEC-SSSEEEEECTTTCCEEEE------------E-ECEETTEECCCEEEEE
T ss_pred -CcEEEEEeCCCce---eEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEE------------E-EeCCCCcccccccccE
Confidence 8888888753322 33446778777554 588999999887322111 1 111122 2346677
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
|. ++ .+++..-.+ +.|.+-|..
T Consensus 188 ~~-dG-~lyanvw~s-------~~I~vIDp~ 209 (268)
T 3nok_A 188 CA-NG-VIYANIWHS-------SDVLEIDPA 209 (268)
T ss_dssp EE-TT-EEEEEETTC-------SEEEEECTT
T ss_pred Ee-CC-EEEEEECCC-------CeEEEEeCC
Confidence 77 34 567655444 678888877
No 260
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.60 E-value=6.2e-06 Score=66.58 Aligned_cols=176 Identities=10% Similarity=0.002 Sum_probs=100.6
Q ss_pred CCEEEEecCCCcEEEEeCCccccccccCCcccc-------ccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccC-
Q 021657 21 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAK-------SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHED- 92 (309)
Q Consensus 21 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 92 (309)
+..++.++.++.|..+|.+++............ .+........ .+..++.+..++..+++.+........
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~--~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAV--VGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEE--ECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEE--EEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 346788888999999999887544332221110 0000011111 123345566666666665544332110
Q ss_pred ------C---e-EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEE
Q 021657 93 ------T---V-EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 162 (309)
Q Consensus 93 ------~---v-~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 162 (309)
. + ..... . + ..++.++.++.+..+|..+++ ...... ......+.. .+..++.++.++.+.
T Consensus 221 ~~~~~~~~~~~~~~p~~-~-~-~~v~~~~~~g~l~~~d~~tG~--~~w~~~--~~~~~~~~~---~~~~l~~~~~~g~l~ 290 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVV-V-N-GVVFALAYNGNLTALDLRSGQ--IMWKRE--LGSVNDFIV---DGNRIYLVDQNDRVM 290 (376)
T ss_dssp ---------CCCCCCEE-E-T-TEEEEECTTSCEEEEETTTCC--EEEEEC--CCCEEEEEE---ETTEEEEEETTCCEE
T ss_pred CCcccccccccCCCcEE-E-C-CEEEEEecCcEEEEEECCCCc--EEeecc--CCCCCCceE---ECCEEEEEcCCCeEE
Confidence 0 1 01111 1 2 357777789999999998888 333322 223444444 456777778899999
Q ss_pred EEecCCCCCCCCCCceeeeccC-CCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 163 MFDRRNLTSNGVGSPINKFEGH-SAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+|..+ ++.+...... ...+...... +..+ ..++.+|.+.++|.++
T Consensus 291 ~~d~~t------G~~~w~~~~~~~~~~~~~~~~--~~~l-~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 291 ALTIDG------GVTLWTQSDLLHRLLTSPVLY--NGNL-VVGDSEGYLHWINVED 337 (376)
T ss_dssp EEETTT------CCEEEEECTTTTSCCCCCEEE--TTEE-EEECTTSEEEEEETTT
T ss_pred EEECCC------CcEEEeecccCCCcccCCEEE--CCEE-EEEeCCCeEEEEECCC
Confidence 999998 7777666522 2223333332 3334 4788899999999887
No 261
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.57 E-value=9.2e-07 Score=77.17 Aligned_cols=157 Identities=3% Similarity=-0.094 Sum_probs=93.6
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-CcEEEEecCCCCCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-NSVRMFDRRNLTSN 172 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~ 172 (309)
...|++.+.++.++++-...+.|.+.++.... ..............++++|..+.++++-... +.|..+++..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~--~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG---- 528 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG---- 528 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC--EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS----
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCc--eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC----
Confidence 45677776554667766677889999986544 2333322334568899998344444443333 6788877764
Q ss_pred CCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEE
Q 021657 173 GVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251 (309)
Q Consensus 173 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 251 (309)
.....+ ...-...+.|+|+|++..|+++-...+.|..+++..... ..+............|++
T Consensus 529 ---~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-------------~~~~~~~~~~~~P~glav 592 (699)
T 1n7d_A 529 ---VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------------KTILEDEKRLAHPFSLAV 592 (699)
T ss_dssp ---CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-------------EEECCCSSSCSSCCCCEE
T ss_pred ---CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce-------------EEEEecCCcCCCceEeEE
Confidence 222222 222345678999998887888888888999999864111 111111111223345555
Q ss_pred ccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 252 NASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 252 ~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.. ..++++.... +.|..++..
T Consensus 593 d~--~~lywtd~~~-------~~V~~~d~~ 613 (699)
T 1n7d_A 593 FE--DKVFWTDIIN-------EAIFSANRL 613 (699)
T ss_dssp ET--TEEEEECSTT-------TCEEEEETT
T ss_pred EC--CEEEEEeCCC-------CeEEEEEcc
Confidence 43 4666654433 788888865
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.56 E-value=0.00018 Score=58.56 Aligned_cols=164 Identities=9% Similarity=-0.053 Sum_probs=106.4
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC--cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT--SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
....+..++|++.++.++.+-...+.|..+++.... ................+++++..++++++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 345678999998765777777778899999986521 112333333445678899987456666776778899999987
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC-CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
. ......+...-.....|++.|.+.+|+.+-.. .+.|...++..... .......-...
T Consensus 190 g------~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~---------------~~~~~~~l~~P 248 (400)
T 3p5b_L 190 G------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---------------YSLVTENIQWP 248 (400)
T ss_dssp T------CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---------------EEEECSSCSCE
T ss_pred C------CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---------------EEEEECCCCce
Confidence 5 33333333334457899999987777766533 47788888765111 01111223457
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+.|+++|++..|+++-+.. +.|..+|+.
T Consensus 249 ~glavd~~~~~lY~aD~~~-------~~I~~~d~d 276 (400)
T 3p5b_L 249 NGITLDLLSGRLYWVDSKL-------HSISSIDVN 276 (400)
T ss_dssp EEEEEETTTTEEEEEETTT-------TEEEEEETT
T ss_pred EEEEEEeCCCEEEEEECCC-------CEEEEEeCC
Confidence 8899998888888765444 688888876
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.56 E-value=2.6e-05 Score=57.93 Aligned_cols=110 Identities=14% Similarity=0.172 Sum_probs=76.3
Q ss_pred CCeEEEEEecCCCcEEEEEcCCC--eEEEEEcCCCCcceEEEeeccCCcee--EEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDS--CLILWDARVGTSPVIKVEKAHDADLH--CVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
.-...+.|++ + .++.+.+.+| .|+.+|+.+++ ........ .... .++.. ++..+...-.++.+.+||..
T Consensus 21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgk--v~~~~~l~-~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGR--ILQRAEVP-PPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCC--EEEEEECC-TTCCEEEEEEE--TTEEEEEESSSSEEEEEETT
T ss_pred cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCC--EEEEEeCC-CCcceeEEEEe--CCEEEEEEeeCCEEEEEECC
Confidence 3467899987 4 7777777764 89999999998 44444322 2222 34443 35556666678999999999
Q ss_pred CCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 168 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
+ .+.+.++...... ..+.+++..|+++- .++.|.++|..+.
T Consensus 94 t------l~~~~ti~~~~~G---wglt~dg~~L~vSd-gs~~l~~iDp~t~ 134 (243)
T 3mbr_X 94 T------LTPRARFRYPGEG---WALTSDDSHLYMSD-GTAVIRKLDPDTL 134 (243)
T ss_dssp T------TEEEEEEECSSCC---CEEEECSSCEEEEC-SSSEEEEECTTTC
T ss_pred c------CcEEEEEeCCCCc---eEEeeCCCEEEEEC-CCCeEEEEeCCCC
Confidence 9 8888888754322 34456777777554 5889999998873
No 264
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.50 E-value=0.0002 Score=56.21 Aligned_cols=160 Identities=9% Similarity=-0.037 Sum_probs=104.7
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN 172 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 172 (309)
....+.|.+.++.++.+-...+.|..+++...... .......-.....+++.+..++++++-...+.|.++++..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG---- 110 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG---- 110 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS----
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC----
Confidence 46789999876577778778899999998765321 1122222345678888874566667766778999999875
Q ss_pred CCCCceeeeccCCCCeeEEEEecCCCcEEEEec-CCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEE
Q 021657 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA-EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251 (309)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 251 (309)
......+.........+++.|.+.+|+.+-. ..+.|...++..... ..+ ....-...+.+++
T Consensus 111 --~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-------------~~~--~~~~l~~Pnglav 173 (318)
T 3sov_A 111 --SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-------------FII--INSEIYWPNGLTL 173 (318)
T ss_dssp --CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-------------EEE--ECSSCSCEEEEEE
T ss_pred --CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-------------EEE--EECCCCCccEEEE
Confidence 2222222233456789999998776776653 357788887764111 011 1112234689999
Q ss_pred ccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 252 NASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 252 ~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+|++..|+.+-+.. +.|..+++.
T Consensus 174 d~~~~~lY~aD~~~-------~~I~~~d~d 196 (318)
T 3sov_A 174 DYEEQKLYWADAKL-------NFIHKSNLD 196 (318)
T ss_dssp ETTTTEEEEEETTT-------TEEEEEETT
T ss_pred eccCCEEEEEECCC-------CEEEEEcCC
Confidence 99888888765544 788888886
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.43 E-value=0.00024 Score=53.53 Aligned_cols=197 Identities=11% Similarity=0.091 Sum_probs=119.2
Q ss_pred ccCCCCCcceEEEEECCCCCEEE-EecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCc
Q 021657 3 ILTGHQDNAEFALAMCPTEPYVL-SGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 81 (309)
Q Consensus 3 ~l~~H~~~~V~~~~~~~~~~~l~-t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (309)
.|.|=.+ .+..++|+|++..|+ +...++.|...|.+.. .....
T Consensus 21 ~l~g~~~-~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~-v~~~i---------------------------------- 64 (255)
T 3qqz_A 21 EIAGITN-NISSLTWSAQSNTLFSTINKPAAIVEMTTNGD-LIRTI---------------------------------- 64 (255)
T ss_dssp ECTTCCS-CEEEEEEETTTTEEEEEEETTEEEEEEETTCC-EEEEE----------------------------------
T ss_pred ECCCccc-CcceeEEeCCCCEEEEEECCCCeEEEEeCCCC-EEEEE----------------------------------
Confidence 4556556 689999999866554 5677888888887621 11000
Q ss_pred CcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc-ceEEEe------eccCCceeEEEeccCCCCeEEE
Q 021657 82 GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS-PVIKVE------KAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 82 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~------~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
.+.+ ......|++.+++ .++++.-.++.+.++++..... ...... .........++|+| .++.|++
T Consensus 65 ----~l~g-~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~v 137 (255)
T 3qqz_A 65 ----PLDF-VKDLETIEYIGDN-QFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWF 137 (255)
T ss_dssp ----ECSS-CSSEEEEEECSTT-EEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEE
T ss_pred ----ecCC-CCChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEE
Confidence 0111 2457788998877 6666666778899998865542 111111 12334568999999 6766666
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeec-------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFE-------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
+.......+|.++.... ...+..+. .....+.+++++|...++++....+..+.++|.... ...
T Consensus 138 a~E~~p~~i~~~~g~~~---~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~---- 208 (255)
T 3qqz_A 138 FKEKNPIEVYKVNGLLS---SNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE--VIG---- 208 (255)
T ss_dssp EEESSSEEEEEEESTTC---SSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEE----
T ss_pred EECcCCceEEEEccccc---CCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC--EEE----
Confidence 66555555555542100 11111111 123457899999988888888888899999997752 111
Q ss_pred CcCCCCceeeeec-CC------CcceeeEEEccCCCeEE
Q 021657 228 TTNYPAGLFFQHA-GH------RDKVVDFHWNASDPWTV 259 (309)
Q Consensus 228 ~~~~~~~~~~~~~-~~------~~~v~~~~~~~~~~~~~ 259 (309)
...+. +. -..-..|+|.++|..++
T Consensus 209 --------~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 209 --------EMSLTKGSRGLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp --------EEECSTTGGGCSSCCCSEEEEEECTTCCEEE
T ss_pred --------EEEcCCccCCcccccCCCCeeEECCCCCEEE
Confidence 11222 11 12458899999887433
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.37 E-value=0.00034 Score=52.69 Aligned_cols=172 Identities=11% Similarity=0.176 Sum_probs=107.7
Q ss_pred ccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCCCCeEEEEcCCCcEEEE
Q 021657 86 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTGSADNSVRMF 164 (309)
Q Consensus 86 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 164 (309)
.+.+-...+..++|+|++..++++...++.|...|.. ++ ....+. ......-.+++.+ ++.++++.-.++.+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~--v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD--LIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC--EEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC--EEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEE
Confidence 3445556799999999876777778889999999987 66 444432 2235678889988 77777776677899999
Q ss_pred ecCCCCCCCCCCceeeec------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee-
Q 021657 165 DRRNLTSNGVGSPINKFE------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF- 237 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~- 237 (309)
++..... ...+.... ..+.....|+|+|.+..|+++.-.+ ...+|.++. ..... ......
T Consensus 97 ~v~~~~~---i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g--~~~~~-------~l~i~~~ 163 (255)
T 3qqz_A 97 SLTPNSE---VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNG--LLSSN-------ELHISKD 163 (255)
T ss_dssp EECTTCC---EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEES--TTCSS-------CCEEEEC
T ss_pred EcCCCCe---eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcc--cccCC-------ceeeecc
Confidence 8876310 01112221 1244578999999998777554444 445555541 00000 001110
Q ss_pred ---eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 238 ---QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 238 ---~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
....+...+.+++++|....+++..... ..|.++|..
T Consensus 164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s-------~~L~~~d~~ 203 (255)
T 3qqz_A 164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHES-------RALQEVTLV 203 (255)
T ss_dssp HHHHHTCCSSCCCEEEEETTTTEEEEEETTT-------TEEEEECTT
T ss_pred hhhccccccCCceeEEEcCCCCeEEEEECCC-------CeEEEEcCC
Confidence 0011234578999999888777765544 777777766
No 267
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.35 E-value=0.00077 Score=59.56 Aligned_cols=163 Identities=8% Similarity=-0.058 Sum_probs=104.3
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc--ceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
...+..|+|.+.++.++++-...+.|+.+++..... .....+.........|++++..++++++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 456788999986657777877888999999865311 123333334456778999884456777777788999999875
Q ss_pred CCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
......+...-.....|++.|.+.+|+++-..+ +.|...++..... .......-....
T Consensus 503 ------~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~---------------~~lv~~~l~~P~ 561 (791)
T 3m0c_C 503 ------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---------------YSLVTENIQWPN 561 (791)
T ss_dssp ------SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE---------------EEEECSSCSCEE
T ss_pred ------CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce---------------EEEEeCCCCCce
Confidence 332222233344688999999877777665433 7788888765211 111122234678
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.|++++.+..|+++-... +.|...++.
T Consensus 562 GLavD~~~~~LYwaD~~~-------~~I~~~d~d 588 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDSKL-------HSISSIDVN 588 (791)
T ss_dssp EEEEETTTTEEEEEETTT-------TEEEEEETT
T ss_pred EEEEecCCCeEEEEeCCC-------CcEEEEecC
Confidence 889988777777764433 677777775
No 268
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.35 E-value=0.00047 Score=59.33 Aligned_cols=117 Identities=3% Similarity=-0.083 Sum_probs=80.0
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc-CCCcEEEEecCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS-ADNSVRMFDRRNLT 170 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~ 170 (309)
.....+++.+.+++++++-...+.|.+.++.... ........-.....|+++|..+.++++-- ..+.|...++..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~--~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-- 159 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL--RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-- 159 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS--
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC--EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC--
Confidence 4578999998765778887888999999987544 22223234456789999993344445432 245677777653
Q ss_pred CCCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 171 SNGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 171 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.....+ ...-...+.|++++++..|+++-...+.|..+|+..
T Consensus 160 -----~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 160 -----SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp -----CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred -----CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 322223 223456789999998887888877888899998875
No 269
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.35 E-value=0.00091 Score=57.66 Aligned_cols=157 Identities=7% Similarity=-0.062 Sum_probs=102.8
Q ss_pred eEEEEECCCCCE-EEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccc
Q 021657 12 EFALAMCPTEPY-VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGH 90 (309)
Q Consensus 12 V~~~~~~~~~~~-l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (309)
+..|+|++.+.. +++-..++.|+.++++.... ...+...
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----------------------------------------~~v~~~g 78 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----------------------------------------EHVVEFG 78 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------------------------------------EEEECSS
T ss_pred eEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----------------------------------------EEEEeCC
Confidence 468999986544 45666778888888763210 0011111
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEE-cCCCcEEEEecCCC
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG-SADNSVRMFDRRNL 169 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~ 169 (309)
......+++.+.+++++++-...+.|.+.++.... ........-.....++++|..+.++++- +..+.|...++..
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~--~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG- 155 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH--RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG- 155 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT--CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc--EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC-
Confidence 13456888887765777887788999999986544 2222223445678999998444444443 2256787787764
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.....+...-...+.|++++++..|+++-...+.|..+|+..
T Consensus 156 ------~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 156 ------SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp ------CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ------CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 223333334456789999998888888888889999999875
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=0.0001 Score=60.60 Aligned_cols=157 Identities=11% Similarity=0.146 Sum_probs=95.4
Q ss_pred CeEEEEEec-CCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-CC----cEEEEec
Q 021657 93 TVEDVTFCP-SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DN----SVRMFDR 166 (309)
Q Consensus 93 ~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg----~i~i~d~ 166 (309)
....++++| +++. |..+...+.|+.+|+..+. +..+.........++|++ +++.|+++.. ++ .+.+++.
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~---v~~~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEY---VSTVYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTE---EEEEECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCE---EEEEecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC
Confidence 457899997 3424 4444444889999987655 233333455688999999 8885555543 22 2444443
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
... ......+.. ......++++|++.+|+++-..++.|..++.... .. ..+.... .....
T Consensus 213 ~g~-----~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~-~~------------~~~~~~~-~~~~P 272 (430)
T 3tc9_A 213 ESG-----FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ-ET------------TPLFTIQ-DSGWE 272 (430)
T ss_dssp GGT-----SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT-EE------------EEEEECS-SSSCC
T ss_pred CCc-----eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-cE------------EEEEEcC-CCCcc
Confidence 321 111122322 2345678999944447777777889999998751 10 0111111 12346
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..++|+|++.+++++-... +.|..++..
T Consensus 273 ~gia~~pdG~~lyv~d~~~-------~~I~~~~~d 300 (430)
T 3tc9_A 273 FHIQFHPSGNYAYIVVVNQ-------HYILRSDYD 300 (430)
T ss_dssp EEEEECTTSSEEEEEETTT-------TEEEEEEEE
T ss_pred eeEEEcCCCCEEEEEECCC-------CEEEEEeCC
Confidence 7899999999777765554 789998876
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.31 E-value=6.4e-05 Score=61.74 Aligned_cols=156 Identities=11% Similarity=0.117 Sum_probs=96.6
Q ss_pred EEEEECC-CCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 13 FALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 13 ~~~~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
..|+++| ++..|..+...+.|+.+|++... +..+....
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-----------------------------------------v~~~~~~~ 178 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-----------------------------------------VSTVYSGL 178 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTE-----------------------------------------EEEEECCC
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCE-----------------------------------------EEEEecCC
Confidence 5889998 45555555544788888876421 11111233
Q ss_pred CCeEEEEEecCCCcEEEEEcCCC----eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDS----CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
.....++|++++..++++...++ .+...+. .+.......+. .......++++|.++.++++-..++.|..+|..
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 45789999999843555554332 3444443 33321112222 234467888999556666666678899999987
Q ss_pred CCCCCCCCCceeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 168 NLTSNGVGSPINKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
. ........ ......+.|+|+|++++|+++-..++.|..++...
T Consensus 257 ~------~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 257 T------QETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp T------TEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred C------CcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 5 33211121 12245678999999998787888889999988764
No 272
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.28 E-value=3.5e-05 Score=65.74 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=36.8
Q ss_pred eEEEEEcCCCCcceEEEee--ccCC----ceeE---EEeccCCC---CeEEEEcCCCcEEEEecCCCCCCCCCCceeeec
Q 021657 115 CLILWDARVGTSPVIKVEK--AHDA----DLHC---VDWNPLDD---NLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182 (309)
Q Consensus 115 ~i~iwd~~~~~~~~~~~~~--~~~~----~v~~---~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 182 (309)
.|..+|..+++ ..-.+. .|.. .+.. +...+ ++ ..++.++.+|.++++|.++ ++.+..+.
T Consensus 273 ~v~Ald~~tG~--~~W~~~~~~~d~~d~~~~~~p~l~~~~~-~G~~~~~v~~~~~~G~l~~lD~~t------G~~~w~~~ 343 (571)
T 2ad6_A 273 TIWGRDLDTGM--AKWGYQKTPHDEWDFAGVNQMVLTDQPV-NGKMTPLLSHIDRNGILYTLNREN------GNLIVAEK 343 (571)
T ss_dssp EEEEEETTTCC--EEEEEESSTTCSSCCCCCCCCEEEEEEE-TTEEEEEEEEECTTSEEEEEETTT------CCEEEEEE
T ss_pred EEEEEecCCCc--EEEEecCCCCcccccccCCCCEEEeccc-CCcEEEEEEEeCCCcEEEEEECCC------CCEEeeec
Confidence 69999999988 333332 2211 1111 22223 45 3677888999999999988 77666553
No 273
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.28 E-value=9.3e-05 Score=57.48 Aligned_cols=115 Identities=10% Similarity=0.111 Sum_probs=79.1
Q ss_pred CeEEEEE---ecCCCcEEEEEc-------------CCCeEEEEEcC---CCCcceEEEeecc-----------CCceeEE
Q 021657 93 TVEDVTF---CPSSAQEFCSVG-------------DDSCLILWDAR---VGTSPVIKVEKAH-----------DADLHCV 142 (309)
Q Consensus 93 ~v~~~~~---~~~~~~~l~s~~-------------~dg~i~iwd~~---~~~~~~~~~~~~~-----------~~~v~~~ 142 (309)
.+..|.| .|++ .++++.. .+..|..+|+. +++......+... ......+
T Consensus 64 ~~sGl~~~~~D~~g-rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDNSK-RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEESSSSSCC-EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred eeeEEEEeccCCCC-cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 3578999 5876 6666543 26789999998 6663222222211 1247899
Q ss_pred EeccCCCCeEEEEcCC-CcEEEEecCCCCCCCCCCceeeec------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 143 DWNPLDDNLILTGSAD-NSVRMFDRRNLTSNGVGSPINKFE------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 143 ~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
+..+ +|+..++++.. +.|..++... +.+..+. ......+.|++.|+|..|++..+ .|.+..+|+
T Consensus 143 avD~-~GnaYVt~s~~~~~I~rV~pdG-------~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~ 213 (334)
T 2p9w_A 143 AQDR-DGNSYVAFALGMPAIARVSADG-------KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDV 213 (334)
T ss_dssp EECT-TSCEEEEEEESSCEEEEECTTS-------CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEEC
T ss_pred EECC-CCCEEEeCCCCCCeEEEEeCCC-------CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcC
Confidence 9999 99999999888 8887777663 3333221 11234679999999997776666 999999998
Q ss_pred Cc
Q 021657 216 EK 217 (309)
Q Consensus 216 ~~ 217 (309)
+.
T Consensus 214 ~~ 215 (334)
T 2p9w_A 214 SK 215 (334)
T ss_dssp SS
T ss_pred CC
Confidence 84
No 274
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.26 E-value=1.4e-05 Score=69.73 Aligned_cols=161 Identities=9% Similarity=-0.051 Sum_probs=97.9
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC---CcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG---TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
..+..++|.+.+..++++-...+.|+.+++... .. ....+.........|++.+..++++++-...+.|.++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~-~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC-CCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc-eEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 345688999876466666666788999998751 11 11122122234567888863566666666678999999875
Q ss_pred CCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCccee
Q 021657 169 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVV 247 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 247 (309)
......+.........|++.|.+.+|+++-... +.|..+++..... ..+. ...-...+
T Consensus 485 ------~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-------------~~l~--~~~l~~Pn 543 (699)
T 1n7d_A 485 ------VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-------------YSLV--TENIQWPN 543 (699)
T ss_dssp ------CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-------------CEES--CSSCSSCC
T ss_pred ------CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-------------eEEE--eCCCCCcc
Confidence 332222222234567899999877677555333 6777777654111 0111 11223467
Q ss_pred eEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 248 DFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 248 ~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.|+|+|++.+|+++-+.. +.|..+++.
T Consensus 544 Glavd~~~~~LY~aD~~~-------~~I~~~d~d 570 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKL-------HSISSIDVN 570 (699)
T ss_dssp CEEECTTTCCEEEEETTT-------TEEEEECSS
T ss_pred EEEEeccCCEEEEEecCC-------CeEEEEccC
Confidence 899999888777765544 788888875
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.25 E-value=0.00092 Score=52.46 Aligned_cols=149 Identities=7% Similarity=0.121 Sum_probs=89.7
Q ss_pred CCeEEEEEcCCCCcceEEEeec------cC-CceeEEEe--ccCCCC-eEEEEcCCCcEEEEecCCCCC-CCCCCceeee
Q 021657 113 DSCLILWDARVGTSPVIKVEKA------HD-ADLHCVDW--NPLDDN-LILTGSADNSVRMFDRRNLTS-NGVGSPINKF 181 (309)
Q Consensus 113 dg~i~iwd~~~~~~~~~~~~~~------~~-~~v~~~~~--~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~ 181 (309)
+++|.+|++..... ....... .. ..+..+|+ +|..+. ++++...+|.+..|++..... ....+.++++
T Consensus 98 ~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 58999997742221 1222211 12 56778888 773343 688888899999999853210 0114667777
Q ss_pred ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee-cCC-CcceeeEEE--ccCCC-
Q 021657 182 EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH-AGH-RDKVVDFHW--NASDP- 256 (309)
Q Consensus 182 ~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~v~~~~~--~~~~~- 256 (309)
.. .+.+..+...+...+|+ .+-++.-|..|+.+..... ....+... .++ ...+..|++ .+++.
T Consensus 177 ~l-gsq~EgcvvDd~~g~Ly-v~eEd~GIw~~da~p~~~~----------~~~~v~~~~~g~l~aDvEGLai~~~~~g~g 244 (355)
T 3amr_A 177 KM-NSQTEGMAADDEYGRLY-IAEEDEAIWKFSAEPDGGS----------NGTVIDRADGRHLTRDIEGLTIYYAADGKG 244 (355)
T ss_dssp EC-SSCEEEEEEETTTTEEE-EEETTTEEEEEECSTTSCS----------CCEEEEEBSSSSBCSCEEEEEEEECGGGCE
T ss_pred cC-CCCcceEEEcCCCCeEE-EecccceEEEEeCCcCCCC----------CceEEEEecCCccccCcceEEEEecCCCCE
Confidence 74 45788889998888766 7777766666664431100 01222222 122 236777877 45555
Q ss_pred eEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 257 WTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 257 ~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+|++++-.+ +++.+||..
T Consensus 245 yLivSsQG~-------~s~~Vydr~ 262 (355)
T 3amr_A 245 YLMASSQGN-------SSYAIYDRQ 262 (355)
T ss_dssp EEEEEEGGG-------TEEEEEESS
T ss_pred EEEEEcCCC-------CEEEEEECC
Confidence 677766444 799999996
No 276
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.23 E-value=0.00034 Score=54.39 Aligned_cols=163 Identities=12% Similarity=0.129 Sum_probs=103.6
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc-----C--CceeEEEe---ccCCCCeEEEEc---
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH-----D--ADLHCVDW---NPLDDNLILTGS--- 156 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~--~~v~~~~~---~~~~~~~l~~~~--- 156 (309)
...--.+++|++.+..++++.-..++|..||...+. ........ . ..+..|.| .| .+.++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~--~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~ 87 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS--HFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAK 87 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC--EEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe--EEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccc
Confidence 334456789998764666666589999999987554 22222221 1 14689999 68 677777543
Q ss_pred ----------CCCcEEEEecC---CCCCCCCCCceeeec--c-----------CCCCeeEEEEecCCCcEEEEecCC-Cc
Q 021657 157 ----------ADNSVRMFDRR---NLTSNGVGSPINKFE--G-----------HSAAVLCVQWSPDKSSVFGSSAED-GL 209 (309)
Q Consensus 157 ----------~dg~i~i~d~~---~~~~~~~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~~~~d-g~ 209 (309)
.+..+..||+. + ++.+.... . .....+.++..++|+ .+++++.. +.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~t------g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~ 160 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSEN------SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPA 160 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTT------CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCE
T ss_pred cccccccccCCCCEEEEEcCCcCCC------CCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCe
Confidence 26779999998 6 55544332 1 123478999999999 56778777 77
Q ss_pred EEEEeCCcccccccCCCCCcCCCCceeeee--cCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 210 LNIWDYEKVGKKVEQGPRTTNYPAGLFFQH--AGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 210 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
|...+... +.... ..... .......+.|+++|++..|++.-+ + |.|..+|+..
T Consensus 161 I~rV~pdG--~~~~~----------~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-------g~L~~fD~~~ 215 (334)
T 2p9w_A 161 IARVSADG--KTVST----------FAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P-------RALTAFDVSK 215 (334)
T ss_dssp EEEECTTS--CCEEE----------EEECCCCSSSCCSCSEEEEETTTTEEEEESS-S-------SSEEEEECSS
T ss_pred EEEEeCCC--CEEee----------eeecCCCcccccCcceEEEeCCCCEEEEEcC-C-------CeEEEEcCCC
Confidence 65555443 21110 00000 111234679999999998887554 4 9999999874
No 277
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.19 E-value=0.00026 Score=55.72 Aligned_cols=114 Identities=13% Similarity=0.048 Sum_probs=73.0
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC----------CCcEE
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA----------DNSVR 162 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----------dg~i~ 162 (309)
....++++|++..++++-...+.|..+++..........+..... ...+++++ ++++.++... .+.|.
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~ 263 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGI 263 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC-CCCEEEEecCcccccccCCCccEEE
Confidence 356789999984456666677899999987532111222211223 78899999 8887666544 45677
Q ss_pred EEecCCCCCCCCCCceeeeccCC----CCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 163 MFDRRNLTSNGVGSPINKFEGHS----AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 163 i~d~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.+|.. ++.+..+.... ..++.+++ .++. |+++...++.|..+++..
T Consensus 264 ~~d~~-------G~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 264 KFDEF-------GNILEVIPLPPPFAGEHFEQIQE-HDGL-LYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECTT-------SCEEEEEECCTTTTTSCCCEEEE-ETTE-EEEECSSCSEEEEEEC--
T ss_pred EECCC-------CCEEEEEECCCCCccccceEEEE-eCCE-EEEeecCCCceEEEeccc
Confidence 88763 56666665332 34666766 3444 776777788999999875
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.16 E-value=9.6e-05 Score=63.18 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=80.9
Q ss_pred EEEecCCCcEEEEeCCccccccccCCcc-----cc--ccCCCCceeecCCC----CCCCCcccCCCCCcCcccccccccC
Q 021657 24 VLSGGKDKSVVLWSIQDHITSSATDPAT-----AK--SAGSSGSIIKQSPK----PGDGNDKAADGPSVGPRGIYNGHED 92 (309)
Q Consensus 24 l~t~~~dg~i~vwd~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
++.++.|+.|..+|.+++.......... .. .+........+... ...+.+..++..+++.+-.+.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 7888889999999998885544322111 00 00000111111111 1245667777776665543322110
Q ss_pred -------------------------------------Ce-EEEEEecCCCcEEEEEcCC----------------CeEEE
Q 021657 93 -------------------------------------TV-EDVTFCPSSAQEFCSVGDD----------------SCLIL 118 (309)
Q Consensus 93 -------------------------------------~v-~~~~~~~~~~~~l~s~~~d----------------g~i~i 118 (309)
.+ ..+++.+.. .+++.+..+ +.|..
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-NLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCC-CEEEEeCCCCccccCcccCCCccccceEEE
Confidence 01 134566665 455555544 47999
Q ss_pred EEcCCCCcceEEEeec--cCC-------ceeEEEec-cCCC---CeEEEEcCCCcEEEEecCCCCCCCCCCceeeec
Q 021657 119 WDARVGTSPVIKVEKA--HDA-------DLHCVDWN-PLDD---NLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182 (309)
Q Consensus 119 wd~~~~~~~~~~~~~~--~~~-------~v~~~~~~-~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 182 (309)
+|..+++ ..-.++. |.. ...-+... . ++ ..++.++.+|.++++|.++ ++.+....
T Consensus 283 ld~~TG~--~~W~~q~~~~d~wd~d~~~~p~l~d~~~~-~G~~~~~v~~~~~~G~l~~lD~~t------G~~lw~~~ 350 (599)
T 1w6s_A 283 RDADTGE--AKFGYQKTPHDEWDYAGVNVMMLSEQKDK-DGKARKLLTHPDRNGIVYTLDRTD------GALVSANK 350 (599)
T ss_dssp EETTTCC--EEEEEESSTTCSSCCCCCCCCEEEEEECT-TSCEEEEEEEECTTSEEEEEETTT------CCEEEEEE
T ss_pred EeCCCCc--eeeEeecCCCccccccCCCccEEEecccc-CCcEEEEEEEECCCcEEEEEECCC------CCEeeccc
Confidence 9999988 3333322 211 11112221 3 56 5677788999999999998 77766543
No 279
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.12 E-value=0.0043 Score=55.35 Aligned_cols=203 Identities=8% Similarity=0.076 Sum_probs=121.2
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 10 NAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 10 ~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
..|.++..+++|. |..|+.++-|..|+............ .. ...+
T Consensus 310 ~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~------------------------------~~--~~~l-- 354 (795)
T 4a2l_A 310 RSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNI------------------------------PY--KNSL-- 354 (795)
T ss_dssp SCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCC------------------------------TT--SSSC--
T ss_pred CcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCC------------------------------CC--CCCC--
Confidence 3689999998886 55677777888888654311100000 00 0001
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee--------ccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK--------AHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
....|.++...++| . |-.|+.++-|..||..+++ ...... .....|.++...+ +++.|..|+.++-|
T Consensus 355 ~~~~V~~i~~d~~g-~-lWiGt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl 429 (795)
T 4a2l_A 355 SDNVVSCIVEDKDK-N-LWIGTNDGGLNLYNPITQR--FTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGL 429 (795)
T ss_dssp SCSSEEEEEECTTS-C-EEEEESSSCEEEECTTTCC--EEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEE
T ss_pred CCCeeEEEEECCCC-C-EEEEECCCCeEEEcCCCCc--EEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCce
Confidence 23468999888877 4 5567777779999987665 222211 1235688998887 77746777777779
Q ss_pred EEEecCCCCCCCCCCceeeec-----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCcee
Q 021657 162 RMFDRRNLTSNGVGSPINKFE-----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF 236 (309)
Q Consensus 162 ~i~d~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
..||..+ ++. ..+. .....|.++...++|. |. .|+.+ -+.+||... ++.... ....
T Consensus 430 ~~~d~~~------~~~-~~~~~~~~~l~~~~v~~i~~d~~g~-lw-igt~~-Gl~~~~~~~-~~~~~~-~~~~------- 490 (795)
T 4a2l_A 430 SILHRNS------GQV-ENFNQRNSQLVNENVYAILPDGEGN-LW-LGTLS-ALVRFNPEQ-RSFTTI-EKEK------- 490 (795)
T ss_dssp EEEETTT------CCE-EEECTTTSCCSCSCEEEEEECSSSC-EE-EEESS-CEEEEETTT-TEEEEC-CBCT-------
T ss_pred eEEeCCC------CcE-EEeecCCCCcCCCeeEEEEECCCCC-EE-EEecC-ceeEEeCCC-CeEEEc-cccc-------
Confidence 9999876 332 2222 1245789999888887 44 44444 588888765 111100 0000
Q ss_pred eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 237 FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 237 ~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
....-....|.++...+++...+.+. +.|..|+..
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt~----------~Gl~~~~~~ 525 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGGE----------EGLSVFKQE 525 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEES----------SCEEEEEEE
T ss_pred cccccCCceEEEEEECCCCCEEEEeC----------CceEEEeCC
Confidence 00011235688999988777555332 357788875
No 280
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.12 E-value=0.0017 Score=50.65 Aligned_cols=146 Identities=7% Similarity=-0.004 Sum_probs=81.9
Q ss_pred EEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe--------eccCCceeEEEeccCCCC-eEEEEcCCCcEEEEe
Q 021657 95 EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE--------KAHDADLHCVDWNPLDDN-LILTGSADNSVRMFD 165 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~i~d 165 (309)
..++..+.+ ..+++-..++.|..+|...++....... ...-.....+ +| ++. ++++-...+.|..||
T Consensus 120 ~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~-dg~~lyv~d~~~~~I~~~~ 195 (306)
T 2p4o_A 120 NGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR-FGNFLYVSNTEKMLLLRIP 195 (306)
T ss_dssp EEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE-ETTEEEEEETTTTEEEEEE
T ss_pred CcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc-CCCEEEEEeCCCCEEEEEE
Confidence 344444444 5566655688888888765421111000 0111234455 77 665 455556678999999
Q ss_pred cCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcc
Q 021657 166 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDK 245 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
+..... ......+.. ......++++++|. ++++...++.|.++|... +.. .+.........
T Consensus 196 ~~~~g~---~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G--~~~------------~~~~~~~~~~~ 256 (306)
T 2p4o_A 196 VDSTDK---PGEPEIFVE-QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR--STT------------IIAQAEQGVIG 256 (306)
T ss_dssp BCTTSC---BCCCEEEEE-SCCCSSEEEBTTCC-EEEECBTTCCEEEECTTC--CEE------------EEECGGGTCTT
T ss_pred eCCCCC---CCccEEEec-cCCCCCeEECCCCC-EEEEeCCCCeEEEECCCC--CEE------------EEeecccccCC
Confidence 874110 111122211 13456789999997 566766778899998642 110 11112222345
Q ss_pred eeeEEEc---cCCCeEEEEec
Q 021657 246 VVDFHWN---ASDPWTVVSVS 263 (309)
Q Consensus 246 v~~~~~~---~~~~~~~~s~s 263 (309)
.++++|. |++..|+++.+
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEEC
T ss_pred ceEEEEecccCCCCEEEEECC
Confidence 7899998 88888887654
No 281
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.10 E-value=0.0038 Score=53.87 Aligned_cols=159 Identities=6% Similarity=-0.051 Sum_probs=106.2
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 171 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 171 (309)
..+..++|++.++.++.+-..++.|..+++.... ..............+++++..++++++-...+.|.+.++..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~--~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG--- 111 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSA--LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG--- 111 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS---
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCC--cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC---
Confidence 3577999999776777887888999999987554 23333333345678899874566667767778999999875
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEe-cCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEE
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS-AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFH 250 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (309)
......+...-.....|++.|...+|+.+- +..+.|...++..... ..+. ..-.....++
T Consensus 112 ---~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-------------~~l~---~~~~~P~Gla 172 (628)
T 4a0p_A 112 ---QHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-------------TTLV---PNVGRANGLT 172 (628)
T ss_dssp ---TTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-------------EEEE---CSCSSEEEEE
T ss_pred ---CcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-------------EEEE---CCCCCcceEE
Confidence 222222223334578999999766677664 2356777777664111 1111 2344678999
Q ss_pred EccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 251 WNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 251 ~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
+++++..|+.+-... +.|...++.
T Consensus 173 lD~~~~~LY~aD~~~-------~~I~~~d~d 196 (628)
T 4a0p_A 173 IDYAKRRLYWTDLDT-------NLIESSNML 196 (628)
T ss_dssp EETTTTEEEEEETTT-------TEEEEEETT
T ss_pred EccccCEEEEEECCC-------CEEEEEcCC
Confidence 999888888765544 788888886
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.09 E-value=0.00025 Score=60.60 Aligned_cols=60 Identities=23% Similarity=0.238 Sum_probs=38.1
Q ss_pred CeEEEEEcCCCCcceEEEee--ccCC----ceeE---EEec-cCCC---CeEEEEcCCCcEEEEecCCCCCCCCCCceee
Q 021657 114 SCLILWDARVGTSPVIKVEK--AHDA----DLHC---VDWN-PLDD---NLILTGSADNSVRMFDRRNLTSNGVGSPINK 180 (309)
Q Consensus 114 g~i~iwd~~~~~~~~~~~~~--~~~~----~v~~---~~~~-~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 180 (309)
+.|..+|..+++ ..-.++ .|.. .+.. +... . ++ ..++.++.+|.++++|.++ ++.+..
T Consensus 291 ~~v~AlD~~TG~--~~W~~q~~~~d~wd~~~~~~p~l~~~~~~-~G~~~~~v~~~~~~G~l~~lD~~t------G~~lw~ 361 (582)
T 1flg_A 291 SGQVGVDPSSGE--VKWFYQHTPNDAWDFSGNNELVLFDYKAK-DGKIVKATAHADRNGFFYVVDRSN------GKLQNA 361 (582)
T ss_dssp SEEEEECTTTCC--EEEEEESSTTCCSCCCCCCCCEEEEEECS-SSCEEEEEEEECTTSEEEEEETTT------CCEEEE
T ss_pred ceEEEEeCCCCC--EEEEEeCCCCCcccccCCCCcEEEeeecC-CCCEEEEEEEECCCceEEEEECCC------CCEecc
Confidence 689999999998 333332 2321 1111 1221 3 45 3788899999999999988 666655
Q ss_pred ec
Q 021657 181 FE 182 (309)
Q Consensus 181 ~~ 182 (309)
+.
T Consensus 362 ~~ 363 (582)
T 1flg_A 362 FP 363 (582)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 283
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.08 E-value=0.0004 Score=60.51 Aligned_cols=52 Identities=10% Similarity=0.008 Sum_probs=37.8
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+|.|..||+.+ ++.+.+..... +.....+...+.. +..++.|+.++.||.++
T Consensus 437 ~g~l~A~D~~t------G~~~W~~~~~~-~~~~~~~~t~gg~-vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 437 SGALLAWDPVK------QKAAWKVPYPT-HWNGGTLSTAGNL-VFQGTAAGQMHAYSADK 488 (668)
T ss_dssp EEEEEEEETTT------TEEEEEEEESS-SCCCCEEEETTTE-EEEECTTSEEEEEETTT
T ss_pred cceEEEEeCCC------CcEEEEccCCC-CCcCceeEeCCCE-EEEECCcccchhhhhhc
Confidence 47899999998 88877776432 3333344555664 45789999999999987
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.04 E-value=0.00066 Score=56.25 Aligned_cols=174 Identities=9% Similarity=0.084 Sum_probs=99.1
Q ss_pred CeEEEEEecC-CCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc---CCceeEEEe-------ccCCCCeEEEEcCCC--
Q 021657 93 TVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH---DADLHCVDW-------NPLDDNLILTGSADN-- 159 (309)
Q Consensus 93 ~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~l~~~~~dg-- 159 (309)
....|+|.|. +.+++++-...+.|++.|+..+. ........ ......++| ++ +++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~--v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM--LSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE--EEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE--EEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCC
Confidence 4678999983 43556665555779999987766 33332221 235789999 99 888666655543
Q ss_pred -----cEEEEecCCCCCCCCCC--c-eeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc------ccccccCC
Q 021657 160 -----SVRMFDRRNLTSNGVGS--P-INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK------VGKKVEQG 225 (309)
Q Consensus 160 -----~i~i~d~~~~~~~~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~------~~~~~~~~ 225 (309)
.|.+++...... .. . ...+... .....++++|++.+|+++-..++.|..+|+.. .+..-...
T Consensus 217 ~~~~~~V~~i~r~~~G~---~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 217 GDESPSVYIIKRNADGT---FDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp GGGEEEEEEEECCTTSC---CSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred cccCceEEEEecCCCCc---eeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 266666332000 11 0 0122211 23457889997777888888899999999872 11110000
Q ss_pred CCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 226 PRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..........+... +.......++|+|++..++++-+.. ..|+.++..
T Consensus 293 ~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~-------h~I~kid~d 340 (496)
T 3kya_A 293 VKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINN-------HYFMRSDYD 340 (496)
T ss_dssp GGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTT-------TEEEEEEEE
T ss_pred ccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCC-------CEEEEEecC
Confidence 00000000112222 2234567899999999767655444 788887764
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.03 E-value=0.00097 Score=59.01 Aligned_cols=116 Identities=14% Similarity=0.109 Sum_probs=61.9
Q ss_pred CeEEEEEecCCCcEEEEEc--CCCeEEEEEcCCCCcce--EEEeeccCCceeEEEeccCCCCeEEEEcCC--C--cEEEE
Q 021657 93 TVEDVTFCPSSAQEFCSVG--DDSCLILWDARVGTSPV--IKVEKAHDADLHCVDWNPLDDNLILTGSAD--N--SVRMF 164 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g--~i~i~ 164 (309)
....+.|+|+|..++++.. ....|.++|+.++.... ............++.|+. ++.+++....+ + .|..+
T Consensus 272 ~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~ 350 (751)
T 2xe4_A 272 FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIA 350 (751)
T ss_dssp CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEE
T ss_pred eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEE
Confidence 4567899999954444443 24568888987653222 223333344556666554 44455555444 3 56666
Q ss_pred ecCCCCCCCCCCceee-eccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeC
Q 021657 165 DRRNLTSNGVGSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 215 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~ 215 (309)
|+.+ ...... +..+...+.--.+.+.+.+++++...++..++|-+
T Consensus 351 d~~~------~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 351 PRGQ------PSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp ETTS------TTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred cCCC------cccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence 6654 111122 22233322222344456677878888887555543
No 286
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.02 E-value=0.0011 Score=56.67 Aligned_cols=52 Identities=19% Similarity=0.137 Sum_probs=36.3
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+|.|..||+.+ ++.+.++... ..+....+...+..++ .++.||.++.+|.++
T Consensus 443 ~g~l~a~D~~t------G~~~W~~~~~-~~~~~~~~~t~gg~v~-~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 443 MGQIRAFDLTT------GKAKWTKWEK-FAAWGGTLYTKGGLVW-YATLDGYLKALDNKD 494 (571)
T ss_dssp CEEEEEECTTT------CCEEEEEEES-SCCCSBCEEETTTEEE-EECTTSEEEEEETTT
T ss_pred CCeEEEEECCC------CCEEEEecCC-CCccceeEEECCCEEE-EEcCCCeEEEEECCC
Confidence 57899999998 8887777533 2233333333455454 688999999999987
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.01 E-value=0.004 Score=51.14 Aligned_cols=173 Identities=9% Similarity=0.097 Sum_probs=95.0
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCCCC-eEEEEcCCCcEEEEecCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDN-LILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~ 170 (309)
....++++|+++.++++-..++.|+.+|..++... ..... +....-..++|+| +++ ++++-...+.|+.++.....
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~~~~~~~ia~dp-dG~~LYvad~~~~~I~~~~~d~~~ 306 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDTKGSNFHIVWHP-TGDWAYIIYNGKHCIYRVDYNRET 306 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSCCSSCEEEEECT-TSSEEEEEETTTTEEEEEEBCTTT
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCCCCCcccEEEeC-CCCEEEEEeCCCCEEEEEeCCCCC
Confidence 45678889943376667667889999998766620 12221 1122234699999 887 55555567889998865311
Q ss_pred CCCCCCc--eeeecc---------------CCCCeeEEEE---------ecCCCcEEEEecCCCcEEEEeCCcccccccC
Q 021657 171 SNGVGSP--INKFEG---------------HSAAVLCVQW---------SPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 224 (309)
Q Consensus 171 ~~~~~~~--~~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~ 224 (309)
+.. ...+.+ .-.....+++ .+++. |+++-..++.|+.++.. +.....
T Consensus 307 ----~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~~--G~v~t~ 379 (433)
T 4hw6_A 307 ----GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTPE--GRVTTY 379 (433)
T ss_dssp ----CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECTT--SEEEEE
T ss_pred ----cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECCC--CCEEEE
Confidence 111 111111 1123567898 56665 67677778889998853 222111
Q ss_pred CCCCcCCCCcee---eeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 225 GPRTTNYPAGLF---FQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 225 ~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
............ ......-.....|+++|.+..|+++-... +.|+..+++
T Consensus 380 ~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n-------~rIr~i~~e 432 (433)
T 4hw6_A 380 AGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN-------HRVRKIAPE 432 (433)
T ss_dssp ECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG-------TEEEEEEEC
T ss_pred EeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC-------CEEEEEecC
Confidence 110000000000 00011123467899995566666655544 688887765
No 288
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.97 E-value=0.0019 Score=55.29 Aligned_cols=82 Identities=12% Similarity=0.181 Sum_probs=48.6
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
+|.|.-||+.+ ++.+.+..... ++..-.....+. ++..++.|+.++.||.++ .+.+.
T Consensus 465 ~G~l~A~D~~t------G~~~W~~~~~~-~~~~g~~~tagg-lvf~g~~dg~l~A~D~~t---------------G~~lW 521 (582)
T 1flg_A 465 VGSLRAMDPVS------GKVVWEHKEHL-PLWAGVLATAGN-LVFTGTGDGYFKAFDAKS---------------GKELW 521 (582)
T ss_dssp SEEEEEECTTT------CCEEEEEEESS-CCCSCCEEETTT-EEEEECTTSEEEEEETTT---------------CCEEE
T ss_pred cceEEEEECCC------CCEEEEecCCC-CCcccceEeCCC-EEEEECCCCcEEEEECCC---------------CCEEE
Confidence 57899999998 88877765332 222212222344 344789999999999988 33344
Q ss_pred eecCCCcce-eeEEEccCCCeEEEEe
Q 021657 238 QHAGHRDKV-VDFHWNASDPWTVVSV 262 (309)
Q Consensus 238 ~~~~~~~~v-~~~~~~~~~~~~~~s~ 262 (309)
++....... .-+.+..++..++++.
T Consensus 522 ~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 522 KFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp EEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EecCCCCcccCceEEEECCEEEEEEE
Confidence 444322211 2355666666555543
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.96 E-value=0.0089 Score=53.32 Aligned_cols=203 Identities=11% Similarity=0.001 Sum_probs=117.4
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 10 NAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 10 ~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
..|.++..+++|. |..|+.++-|..|+..+......... ....... -
T Consensus 357 ~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~------------------------------~~~~~~~--l 403 (795)
T 4a2l_A 357 NVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQ------------------------------EDESARG--I 403 (795)
T ss_dssp SSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------------------------------------C--C
T ss_pred CeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecC------------------------------CCCcccC--C
Confidence 3689999988886 55577777888888764321100000 0000000 0
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee----ccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK----AHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
....|.++...+++ .+|..|+.++-|..+|..+++ ...... .....|.++...+ ++.+.+.. .+ -+..||
T Consensus 404 ~~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt-~~-Gl~~~~ 477 (795)
T 4a2l_A 404 GSNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQ--VENFNQRNSQLVNENVYAILPDG-EGNLWLGT-LS-ALVRFN 477 (795)
T ss_dssp SCSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCC--EEEECTTTSCCSCSCEEEEEECS-SSCEEEEE-SS-CEEEEE
T ss_pred CCccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCc--EEEeecCCCCcCCCeeEEEEECC-CCCEEEEe-cC-ceeEEe
Confidence 23568899888877 535566776779999988766 222211 1245788998887 66655544 44 488899
Q ss_pred cCCCCCCCCCCceeeecc-------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeee
Q 021657 166 RRNLTSNGVGSPINKFEG-------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ 238 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
..+ ++. ..+.. ....|.++...++|. +. .|+. +-+..||.......... .. ..
T Consensus 478 ~~~------~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~-lW-igt~-~Gl~~~~~~~~~~~~~~--~~--------~~ 537 (795)
T 4a2l_A 478 PEQ------RSF-TTIEKEKDGTPVVSKQITTLFRDSHKR-LW-IGGE-EGLSVFKQEGLDIQKAS--IL--------PV 537 (795)
T ss_dssp TTT------TEE-EECCBCTTCCBCCCCCEEEEEECTTCC-EE-EEES-SCEEEEEEETTEEEECC--CS--------CS
T ss_pred CCC------CeE-EEccccccccccCCceEEEEEECCCCC-EE-EEeC-CceEEEeCCCCeEEEec--CC--------CC
Confidence 876 332 22211 235689999999988 44 4444 45888887651110000 00 00
Q ss_pred ecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 239 HAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 239 ~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
.......|.++...+++...+.+. +-|..||..
T Consensus 538 ~~l~~~~i~~i~~d~~g~lWigT~----------~Gl~~~d~~ 570 (795)
T 4a2l_A 538 SNVTKLFTNCIYEASNGIIWVGTR----------EGFYCFNEK 570 (795)
T ss_dssp CGGGGSCEEEEEECTTSCEEEEES----------SCEEEEETT
T ss_pred CCCCCCeeEEEEECCCCCEEEEeC----------CCceeECCC
Confidence 011345688899888777555321 246777765
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.95 E-value=0.0014 Score=53.94 Aligned_cols=158 Identities=8% Similarity=0.172 Sum_probs=92.1
Q ss_pred CeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC---C-cEEEEec
Q 021657 93 TVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD---N-SVRMFDR 166 (309)
Q Consensus 93 ~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g-~i~i~d~ 166 (309)
....++|+|+ ++.++++ ...+.|+.+|..++. +..+.........+++++ +++++++-... . .+..++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~---v~~~~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQY---VDIKTTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTE---EEEECCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCCE---EEEeecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEEC
Confidence 4568999985 3254444 433889999987666 333334445688999999 88855554321 1 2333333
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcce
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKV 246 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 246 (309)
... ......+. .-.....++++|++..|+++-..++.|+.+|... +... ..+... +....-
T Consensus 215 ~~~-----~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-g~~~-----------~~~~~~-~~~~~~ 275 (433)
T 4hw6_A 215 ASG-----FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-GTLT-----------EEEVMM-DTKGSN 275 (433)
T ss_dssp GGT-----TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT-CCEE-----------EEEEEC-SCCSSC
T ss_pred CCC-----eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC-CeEE-----------EEEecc-CCCCCc
Confidence 221 11011222 2234567899994444676766788899998864 1110 011111 111223
Q ss_pred eeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 247 VDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 247 ~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..++|+|++.+|+++-... +.|+.+++.
T Consensus 276 ~~ia~dpdG~~LYvad~~~-------~~I~~~~~d 303 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGK-------HCIYRVDYN 303 (433)
T ss_dssp EEEEECTTSSEEEEEETTT-------TEEEEEEBC
T ss_pred ccEEEeCCCCEEEEEeCCC-------CEEEEEeCC
Confidence 4699999998777765554 789998875
No 291
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.85 E-value=0.0012 Score=57.37 Aligned_cols=28 Identities=21% Similarity=0.398 Sum_probs=22.0
Q ss_pred EEEECCCCCEEEEecC-CCcEEEEeCCcc
Q 021657 14 ALAMCPTEPYVLSGGK-DKSVVLWSIQDH 41 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~~-dg~i~vwd~~~~ 41 (309)
++++.+++++++.|+. +..+.+||..+.
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGT
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCC
Confidence 4677889999999884 557999998754
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=0.0015 Score=54.11 Aligned_cols=124 Identities=12% Similarity=0.153 Sum_probs=74.2
Q ss_pred CCeEEEEE-------ecCCCcEEEEEcCCC------eEEEEEcCC-CCcce---EEEeeccCCceeEEEeccCCCCeEEE
Q 021657 92 DTVEDVTF-------CPSSAQEFCSVGDDS------CLILWDARV-GTSPV---IKVEKAHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 92 ~~v~~~~~-------~~~~~~~l~s~~~dg------~i~iwd~~~-~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~ 154 (309)
.....++| ++++..++++-..++ .|.+.+... +.... ...+... .....++++|.++.++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 35789999 999844555544442 266666433 12110 0122222 244678899955666777
Q ss_pred EcCCCcEEEEecC-------CCCCC------CCC--CceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 155 GSADNSVRMFDRR-------NLTSN------GVG--SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 155 ~~~dg~i~i~d~~-------~~~~~------~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
-..++.|..+|+. +.... ..+ +.+... ......+.|+|+|+|..|+++-...+.|+.++...
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 7788899999997 42110 000 011112 12344678999999997777777888999876543
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.76 E-value=0.016 Score=49.98 Aligned_cols=117 Identities=4% Similarity=-0.049 Sum_probs=79.0
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-CCcEEEEecCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLT 170 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~ 170 (309)
.....+++...+++++++-+..+.|.+.++.... ........-.....++++|..+.++++-.. .+.|...++..
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~--~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG-- 467 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM--RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG-- 467 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS--
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe--EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC--
Confidence 3566889987665778887788999999987544 222233344568899999933555555322 35677666653
Q ss_pred CCCCCCceeee-ccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 171 SNGVGSPINKF-EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 171 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.....+ ...-...+.|++++++..|+++-...+.|..+++..
T Consensus 468 -----~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 468 -----SDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp -----CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred -----CccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence 222223 223456789999998877887777788899999865
No 294
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.73 E-value=0.008 Score=51.50 Aligned_cols=52 Identities=17% Similarity=0.138 Sum_probs=34.5
Q ss_pred CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 158 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 158 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
.|.|.-||+.+ ++.+.+.... .+...-.+...+..+| .++.|+.++.||.++
T Consensus 452 ~G~l~A~D~~t------G~~~W~~~~~-~~~~~g~~~tagg~vf-~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 452 LGQIKAYNAIT------GDYKWEKMER-FAVWGGTMATAGDLVF-YGTLDGYLKARDSDT 503 (599)
T ss_dssp CEEEEEECTTT------CCEEEEEEES-SCCCSBCEEETTTEEE-EECTTSEEEEEETTT
T ss_pred cCeEEEEECCC------CCEEeEecCC-CCccCcceEecCCEEE-EECCCCeEEEEECCC
Confidence 47888899988 7777776522 2222111233455444 688999999999998
No 295
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.018 Score=51.20 Aligned_cols=197 Identities=8% Similarity=0.020 Sum_probs=113.8
Q ss_pred cceEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccc
Q 021657 10 NAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNG 89 (309)
Q Consensus 10 ~~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (309)
..|.++...++|. |..|+.++-|..||..+......... -..
T Consensus 363 ~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~-------------------------------------~~~ 404 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKEN-------------------------------------REL 404 (781)
T ss_dssp SCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC------------------------------------------C
T ss_pred cceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCC-------------------------------------CCC
Confidence 3689999988876 45566666788888764321100000 011
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee--ccCCceeEEEeccCCCCeEEEEcCCCcEEEEecC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK--AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 167 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 167 (309)
....|.++...+++ . |..|+.++-|..+|..+++ ...... .....|.++...+ ++.+ ..|+. +-|..||..
T Consensus 405 ~~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~-~g~l-wigt~-~Gl~~~~~~ 477 (781)
T 3v9f_A 405 LSNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDK-NKKI-WIGTH-AGVFVIDLA 477 (781)
T ss_dssp CCSBEEEEEECTTS-C-EEEEETTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECT-TSEE-EEEET-TEEEEEESS
T ss_pred CCcceEEEEECCCC-C-EEEEeccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECC-CCCE-EEEEC-CceEEEeCC
Confidence 23568888887776 4 4456666678889876655 222211 1345788998887 5654 44455 458889987
Q ss_pred CCCCCCCCCceeeecc-----CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee-cC
Q 021657 168 NLTSNGVGSPINKFEG-----HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH-AG 241 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (309)
+ ++....... ....|.++...++|. +. .|+.++-+..||.... +... +... .-
T Consensus 478 ~------~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~-~~~~------------~~~~~~l 536 (781)
T 3v9f_A 478 S------KKVIHHYDTSNSQLLENFVRSIAQDSEGR-FW-IGTFGGGVGIYTPDMQ-LVRK------------FNQYEGF 536 (781)
T ss_dssp S------SSCCEEECTTTSSCSCSCEEEEEECTTCC-EE-EEESSSCEEEECTTCC-EEEE------------ECTTTTC
T ss_pred C------CeEEecccCcccccccceeEEEEEcCCCC-EE-EEEcCCCEEEEeCCCC-eEEE------------ccCCCCC
Confidence 6 332221111 135789999999888 44 5555445777887541 1100 0000 01
Q ss_pred CCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 242 HRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
....|.++...+++...+.+. +|.+..||..
T Consensus 537 ~~~~i~~i~~d~~g~lWi~T~---------~Glv~~~d~~ 567 (781)
T 3v9f_A 537 CSNTINQIYRSSKGQMWLATG---------EGLVCFPSAR 567 (781)
T ss_dssp SCSCEEEEEECTTSCEEEEET---------TEEEEESCTT
T ss_pred CCCeeEEEEECCCCCEEEEEC---------CCceEEECCC
Confidence 234688888888776555321 2544666654
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.63 E-value=0.015 Score=46.08 Aligned_cols=160 Identities=11% Similarity=0.091 Sum_probs=91.5
Q ss_pred CeEEEEEecCCCcEEEEEc------------CCCeEEEEEcCCCCcce-EEEeec-----cCCceeEEEeccC-CC--Ce
Q 021657 93 TVEDVTFCPSSAQEFCSVG------------DDSCLILWDARVGTSPV-IKVEKA-----HDADLHCVDWNPL-DD--NL 151 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~-~~~~~~-----~~~~v~~~~~~~~-~~--~~ 151 (309)
...++...|+| ..+++++ .+|.|.++|..+..... ...+.+ .......+.+.+. ++ .+
T Consensus 51 G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 45677788877 5555542 68999999987432111 112222 2235677777551 23 24
Q ss_pred EEEEcC--CCcEEEEecCCCCCCCCCCceeeeccC-CCCeeEEEEecCCCcEEEEecC-----------------CCcEE
Q 021657 152 ILTGSA--DNSVRMFDRRNLTSNGVGSPINKFEGH-SAAVLCVQWSPDKSSVFGSSAE-----------------DGLLN 211 (309)
Q Consensus 152 l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~-----------------dg~i~ 211 (309)
+++-.. +.+|.+|++..... ....+.++.+. -...+.+.+.++|.+ +++... .|.|.
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~~~~~pND~~v~~~G~f-yvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHKLLPSVNDIVAVGPEHF-YATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTT--EEEEEEEECCTTCSSEEEEEEEETTEE-EEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCC--EEEEEeccccCCCCCCceEEEeCCCCE-EecCCcEeCCcccccchhhccCCccEEE
Confidence 455444 56788888765210 02233344432 235789999999984 445431 13333
Q ss_pred EEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 212 IWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 212 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
-+|... +......-...+.++|+|++..++++-+.. +.|..|++.
T Consensus 207 r~d~~~------------------~~~~~~~l~~pNGia~spDg~~lYvadt~~-------~~I~~~~~~ 251 (355)
T 3sre_A 207 YYSPND------------------VRVVAEGFDFANGINISPDGKYVYIAELLA-------HKIHVYEKH 251 (355)
T ss_dssp EECTTC------------------CEEEEEEESSEEEEEECTTSSEEEEEEGGG-------TEEEEEEEC
T ss_pred EEECCe------------------EEEeecCCcccCcceECCCCCEEEEEeCCC-------CeEEEEEEC
Confidence 333211 111111223468999999999988877655 899999987
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.61 E-value=0.0082 Score=47.17 Aligned_cols=123 Identities=11% Similarity=0.168 Sum_probs=80.3
Q ss_pred CCeEEEEE--ecC-CCcEEEEEcCCCeEEEEEcCC---CC--cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 92 DTVEDVTF--CPS-SAQEFCSVGDDSCLILWDARV---GT--SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 92 ~~v~~~~~--~~~-~~~~l~s~~~dg~i~iwd~~~---~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
..+..+++ +|. +..+++....+|.+..|++.. +. ...+..+.. ...+-.+...+ ....|+.+-.+.-|..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd-~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD-EYGRLYIAEEDEAIWK 205 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET-TTTEEEEEETTTEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC-CCCeEEEecccceEEE
Confidence 45666777 664 334677888899999999843 21 123444433 45788888998 7888888888866766
Q ss_pred EecCCCCCCCCCCceeeec--cCCCCeeEEEE--ecCCC-cEEEEecCCCcEEEEeCCc
Q 021657 164 FDRRNLTSNGVGSPINKFE--GHSAAVLCVQW--SPDKS-SVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~--~~~~~v~~~~~--~~~~~-~l~~~~~~dg~i~iwd~~~ 217 (309)
||.+-... ...+.+..+. .....+..|++ .++++ +|++++-.+.++.+||...
T Consensus 206 ~da~p~~~-~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 206 FSAEPDGG-SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EECSTTSC-SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EeCCcCCC-CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 67542110 0033444442 12346888888 45566 7888887889999999973
No 298
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.58 E-value=0.0022 Score=55.82 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=60.1
Q ss_pred EEEEEecCCCcEEEEEcCCC-----------eEEEEEcCCCCcceEE--EeeccCCceeEEEeccCCCCeEEEEcCC---
Q 021657 95 EDVTFCPSSAQEFCSVGDDS-----------CLILWDARVGTSPVIK--VEKAHDADLHCVDWNPLDDNLILTGSAD--- 158 (309)
Q Consensus 95 ~~~~~~~~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d--- 158 (309)
.++.|...+.++++.|+.++ .|.+||..+....... .+ .....-.++...| ++++++.|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m-p~~R~~~~~~~l~-~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFARTFHTSVVLP-DGSTFITGGQRRGI 479 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCCBSCEEEECT-TSCEEEECCBSBCC
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC-CCCcccCCeEECC-CCCEEEECCcccCc
Confidence 44455443447888887543 6788888776632221 11 1122234556677 88999999864
Q ss_pred --------CcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC
Q 021657 159 --------NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 206 (309)
Q Consensus 159 --------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 206 (309)
..+.+||..+.. ...+..+........+..+.|+++ +++.|+.
T Consensus 480 ~~~~~~~~~~v~~ydp~t~~----W~~~~~~~~~R~~hs~a~ll~dg~-v~v~GG~ 530 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQDT----FYKQNPNSIVRVYHSISLLLPDGR-VFNGGGG 530 (656)
T ss_dssp TTCCCSBCCCCEEEEGGGTE----EEECCCCSSCCCTTEEEEECTTSC-EEEEECC
T ss_pred CcCCCCcccceEEEcCCCCc----eeecCCCCCccccccHhhcCCCcE-EEecCCC
Confidence 468999987622 222222222222333455678998 5667774
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.56 E-value=0.019 Score=45.48 Aligned_cols=144 Identities=8% Similarity=0.010 Sum_probs=83.1
Q ss_pred CeEEEEEec--CCCcEEEEE-cC--CCeEEEEEcCCCCc--ceEEEeecc-CCceeEEEeccCCCCeEEEEcC-------
Q 021657 93 TVEDVTFCP--SSAQEFCSV-GD--DSCLILWDARVGTS--PVIKVEKAH-DADLHCVDWNPLDDNLILTGSA------- 157 (309)
Q Consensus 93 ~v~~~~~~~--~~~~~l~s~-~~--dg~i~iwd~~~~~~--~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~------- 157 (309)
....+.+.+ ++..+|+.+ .. +.+|.+|++..... .....+.+. -...+.+.+.+ ++.++++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCccc
Confidence 455666655 343334443 33 56788888765432 122222222 23578899999 8887777541
Q ss_pred ----------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCC
Q 021657 158 ----------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 227 (309)
Q Consensus 158 ----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~ 227 (309)
.|.|.-+|.. + +..+...-...+.++|+||++.++++-+..+.|..|++...+....
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~--------~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~---- 258 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPN--------D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP---- 258 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTT--------C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE----
T ss_pred ccchhhccCCccEEEEEECC--------e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec----
Confidence 2444444432 1 2222222345789999999998888888889999999875332211
Q ss_pred CcCCCCceeeeecCCCcceeeEEEcc-CCCeEE
Q 021657 228 TTNYPAGLFFQHAGHRDKVVDFHWNA-SDPWTV 259 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~ 259 (309)
.. .+. .....-.++..+ +|...+
T Consensus 259 -----~~-~~~---~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 259 -----LR-VLS---FDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp -----EE-EEE---CSSEEEEEEECTTTCCEEE
T ss_pred -----CE-EEe---CCCCCceEEEeCCCCcEEE
Confidence 01 111 134567788888 466544
No 300
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.46 E-value=0.022 Score=44.07 Aligned_cols=103 Identities=11% Similarity=0.115 Sum_probs=53.8
Q ss_pred cEEEEEcCCC-----eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-------CcEEEEecCCCCCC
Q 021657 105 QEFCSVGDDS-----CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-------NSVRMFDRRNLTSN 172 (309)
Q Consensus 105 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~ 172 (309)
.+++.|+.++ .+.+||+.+.+......+...... .+++.. ++.+++.|+.+ ..+.+||+.+..
T Consensus 110 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-- 184 (302)
T 2xn4_A 110 LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE-- 184 (302)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS-CEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE--
T ss_pred EEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC-ceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc--
Confidence 6777776543 577889877764332222211111 222222 56777777653 358889987632
Q ss_pred CCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCc
Q 021657 173 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEK 217 (309)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~ 217 (309)
...+..+....... +++.. ++. +++.|+.+ ..+.+||+.+
T Consensus 185 --W~~~~~~p~~r~~~-~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 185 --WTYIAEMSTRRSGA-GVGVL-NNL-LYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp --EEEECCCSSCCBSC-EEEEE-TTE-EEEECCBSSSSBCCCEEEEETTT
T ss_pred --EEECCCCccccccc-cEEEE-CCE-EEEECCCCCCcccceEEEEeCCC
Confidence 22222222111122 22222 344 67777654 3688899876
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.46 E-value=0.055 Score=48.19 Aligned_cols=142 Identities=10% Similarity=0.087 Sum_probs=84.0
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEE-eeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV-EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT 170 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 170 (309)
..|.++...+++ . |..|+.++-|..||..++....... .......|.++...+ ++. |..|+.++-+..+|.++
T Consensus 363 ~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~-- 436 (781)
T 3v9f_A 363 KVVSSVCDDGQG-K-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGN-LWFGTYLGNISYYNTRL-- 436 (781)
T ss_dssp SCEEEEEECTTS-C-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSC-EEEEETTEEEEEECSSS--
T ss_pred cceEEEEEcCCC-C-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCC-EEEEeccCCEEEEcCCC--
Confidence 568889888776 4 5556655668889876443110000 012345788998877 555 44466666788898875
Q ss_pred CCCCCCceeeec---cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeee---cCCCc
Q 021657 171 SNGVGSPINKFE---GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQH---AGHRD 244 (309)
Q Consensus 171 ~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 244 (309)
++ ...+. .....|.++...+++. +. .|+. +-+..||.... +... .... .....
T Consensus 437 ----~~-~~~~~~~~~~~~~v~~i~~d~~g~-lw-igt~-~Gl~~~~~~~~-~~~~------------~~~~~~~~~~~~ 495 (781)
T 3v9f_A 437 ----KK-FQIIELEKNELLDVRVFYEDKNKK-IW-IGTH-AGVFVIDLASK-KVIH------------HYDTSNSQLLEN 495 (781)
T ss_dssp ----CE-EEECCSTTTCCCCEEEEEECTTSE-EE-EEET-TEEEEEESSSS-SCCE------------EECTTTSSCSCS
T ss_pred ----Cc-EEEeccCCCCCCeEEEEEECCCCC-EE-EEEC-CceEEEeCCCC-eEEe------------cccCcccccccc
Confidence 33 22332 1345788998888887 44 4554 55888887651 1100 0000 01135
Q ss_pred ceeeEEEccCCCeEEE
Q 021657 245 KVVDFHWNASDPWTVV 260 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~ 260 (309)
.|.++...+++...+.
T Consensus 496 ~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 496 FVRSIAQDSEGRFWIG 511 (781)
T ss_dssp CEEEEEECTTCCEEEE
T ss_pred eeEEEEEcCCCCEEEE
Confidence 6888988887775554
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.41 E-value=0.024 Score=43.98 Aligned_cols=150 Identities=11% Similarity=0.055 Sum_probs=74.6
Q ss_pred cEEEEEcCC------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC---------CCcEEEEecCCC
Q 021657 105 QEFCSVGDD------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA---------DNSVRMFDRRNL 169 (309)
Q Consensus 105 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~ 169 (309)
.+++.|+.+ ..+.+||..+.+......+...... .+++.. ++.+++.|+. -..+.+||+.+.
T Consensus 103 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 103 KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS-HGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce-eEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 677777754 4688999887764332222111111 222222 5677777764 345888998873
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCc
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRD 244 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
. ...+..+......- ++... +++ +++.|+.+ ..+.+||+.+.. -... ..+.....
T Consensus 180 ~----W~~~~~~p~~r~~~-~~~~~-~~~-i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~------------~~~p~~r~ 239 (306)
T 3ii7_A 180 T----WTELCPMIEARKNH-GLVFV-KDK-IFAVGGQNGLGGLDNVEYYDIKLNE-WKMV------------SPMPWKGV 239 (306)
T ss_dssp E----EEEECCCSSCCBSC-EEEEE-TTE-EEEECCEETTEEBCCEEEEETTTTE-EEEC------------CCCSCCBS
T ss_pred e----EEECCCccchhhcc-eEEEE-CCE-EEEEeCCCCCCCCceEEEeeCCCCc-EEEC------------CCCCCCcc
Confidence 2 22222222111112 22222 444 67677654 357888887621 1110 00111111
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
....+.+ +..+++.++.+ ..+.-..+.+||+..
T Consensus 240 ~~~~~~~---~~~i~v~GG~~--~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 240 TVKCAAV---GSIVYVLAGFQ--GVGRLGHILEYNTET 272 (306)
T ss_dssp CCEEEEE---TTEEEEEECBC--SSSBCCEEEEEETTT
T ss_pred ceeEEEE---CCEEEEEeCcC--CCeeeeeEEEEcCCC
Confidence 1122222 45677777655 333446788899874
No 303
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.35 E-value=0.022 Score=44.33 Aligned_cols=150 Identities=9% Similarity=0.007 Sum_probs=73.9
Q ss_pred cEEEEEcCC-----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-----CcEEEEecCCCCCCCC
Q 021657 105 QEFCSVGDD-----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-----NSVRMFDRRNLTSNGV 174 (309)
Q Consensus 105 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 174 (309)
.+++.|+.+ ..+.+||..+.+......+........++.+ ++.+++.|+.+ ..+.+||+.+..
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~---- 195 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNE---- 195 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTE----
T ss_pred EEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCe----
Confidence 667776643 3588899877663222222111112222222 56777777764 458889987632
Q ss_pred CCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeE
Q 021657 175 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDF 249 (309)
Q Consensus 175 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (309)
...+..+.........+.+ ++. +++.|+.+ ..+.+||+.... -... ..+.........+
T Consensus 196 W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~------------~~~p~~r~~~~~~ 259 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVETET-WTFV------------APMKHRRSALGIT 259 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTE-EEEC------------CCCSSCCBSCEEE
T ss_pred EeeCCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCCCc-EEEC------------CCCCCCccceEEE
Confidence 2222222211122222222 344 67777654 558899987622 1110 0011111111122
Q ss_pred EEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 250 HWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 250 ~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+ +..+++.++.+ ....-..+.+||+..
T Consensus 260 ~~---~~~i~v~GG~~--~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 260 VH---QGRIYVLGGYD--GHTFLDSVECYDPDT 287 (308)
T ss_dssp EE---TTEEEEECCBC--SSCBCCEEEEEETTT
T ss_pred EE---CCEEEEEcCcC--CCcccceEEEEcCCC
Confidence 22 45677777655 333346788888873
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.34 E-value=0.033 Score=43.21 Aligned_cols=188 Identities=12% Similarity=0.173 Sum_probs=103.8
Q ss_pred CCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC----CceeEEEecc
Q 021657 71 GNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD----ADLHCVDWNP 146 (309)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~v~~~~~~~ 146 (309)
..+.++++.+...++...- ...|.-=.|-.+. .|+-.+ +..|+-|++..... +.+.+..|. ..|.....++
T Consensus 87 ~~LQiFnletK~klks~~~-~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s~-P~kvFdR~~~L~~~QIInY~~d~ 161 (365)
T 2xzh_A 87 KTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQ-PVKMFDRHSSLAGCQIINYRTDA 161 (365)
T ss_dssp TEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS--EEEEEE-SSEEEEEESSTTCC-CEEEEECCGGGTTCEEEEEEECT
T ss_pred CeEEEechHHhhhhcceec-CCccEEEEecCCC--eEEEEc-CCcEEEEcccCCCC-CceeeecchhcccceEEEEEECC
Confidence 3445555555554444432 3567777776654 344333 35799999976433 455555443 4677777888
Q ss_pred CCCCeEEEEcC-------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEe--cCCCcEEEEecC---CCcEEEEe
Q 021657 147 LDDNLILTGSA-------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS--PDKSSVFGSSAE---DGLLNIWD 214 (309)
Q Consensus 147 ~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~---dg~i~iwd 214 (309)
+.++++..+- .|.+.+|..+. +.-+.+++|......+.+. +....||+-+.. .+.++|-+
T Consensus 162 -~~kW~~l~GI~~~~~~v~G~mQLYS~er-------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiE 233 (365)
T 2xzh_A 162 -KQKWLLLTGISAQQNRVVGAMQLYSVDR-------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 233 (365)
T ss_dssp -TSCEEEEEEEEEETTEEEEEEEEEETTT-------TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEE
T ss_pred -CCCEEEEEeEeccCCccceeEEEEeecc-------cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 7776665442 36788898874 5566777775544333222 111224443332 25899999
Q ss_pred CCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 215 YEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+...........+. .....+.-....+-..++..++..+.+++.... |.|++||+..
T Consensus 234 i~~~~~~~~~f~kk---~vdi~fppea~~DFPVamqvs~kygviyviTK~--------G~ihlyDleT 290 (365)
T 2xzh_A 234 VGTPPTGNQPFPKK---AVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY--------GYIHLYDLET 290 (365)
T ss_dssp CSSCCTTCCCCCCE---EEEECCCTTCTTCCEEEEEEETTTTEEEEEETT--------SEEEEEETTT
T ss_pred cCCCCCCCCCcccc---cceeeCCccccCCceEEEEecccCCEEEEEeCC--------cEEEEEEccc
Confidence 86531110000000 001111112234455678888877766655444 8999999993
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.32 E-value=0.039 Score=43.39 Aligned_cols=108 Identities=15% Similarity=0.238 Sum_probs=60.9
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL 169 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 169 (309)
....+..+.+.+++ .+++.+...+..+-+|-..... ..........+..+.+.+ ++..++. +.+|.+++.+...
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~gG~tW--~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~G~~~~s~~D~- 234 (327)
T 2xbg_A 161 AIGVMRNLNRSPSG-EYVAVSSRGSFYSTWEPGQTAW--EPHNRTTSRRLHNMGFTP-DGRLWMI-VNGGKIAFSDPDN- 234 (327)
T ss_dssp CCCCEEEEEECTTS-CEEEEETTSSEEEEECTTCSSC--EEEECCSSSCEEEEEECT-TSCEEEE-ETTTEEEEEETTE-
T ss_pred CCcceEEEEEcCCC-cEEEEECCCcEEEEeCCCCCce--eECCCCCCCccceeEECC-CCCEEEE-eCCceEEEecCCC-
Confidence 34568889999987 6666664443333344211221 112234456788999988 7765544 4678887764221
Q ss_pred CCCCCCCceeeec----cCCCCeeEEEEecCCCcEEEEecCCCcE
Q 021657 170 TSNGVGSPINKFE----GHSAAVLCVQWSPDKSSVFGSSAEDGLL 210 (309)
Q Consensus 170 ~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~dg~i 210 (309)
++.-..+. .....+.++++.+++. +++++. +|.+
T Consensus 235 -----G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g~-~g~i 272 (327)
T 2xbg_A 235 -----SENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAGG-AGAL 272 (327)
T ss_dssp -----EEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEES-TTCE
T ss_pred -----CCeeEeccCCcccCCcceEEEEecCCCE-EEEEeC-CCeE
Confidence 11111111 1123588899998776 565554 6766
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.24 E-value=0.044 Score=42.36 Aligned_cols=103 Identities=11% Similarity=0.131 Sum_probs=55.6
Q ss_pred cEEEEEcCC-----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-----CcEEEEecCCCCCCCC
Q 021657 105 QEFCSVGDD-----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-----NSVRMFDRRNLTSNGV 174 (309)
Q Consensus 105 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 174 (309)
.+++.|+.+ ..+.+||+.+.+............. .+++.. ++.+++.|+.+ ..+.+||+.+..
T Consensus 114 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~---- 186 (301)
T 2vpj_A 114 MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG-AGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH---- 186 (301)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS-CEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE----
T ss_pred EEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc-ceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc----
Confidence 677777643 3688999887764333332221112 222222 56777877754 458889987632
Q ss_pred CCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCc
Q 021657 175 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEK 217 (309)
Q Consensus 175 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~ 217 (309)
...+..+.........+.+ ++. +++.|+.+ ..+.+||+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 187 WTNVTPMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTT
T ss_pred EEeCCCCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeCCC
Confidence 2222222211111222222 343 67777754 4688999876
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.13 E-value=0.062 Score=42.75 Aligned_cols=107 Identities=9% Similarity=0.090 Sum_probs=59.8
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe---eccCCceeEEEeccCC----CCeEEEEcCC-----C
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE---KAHDADLHCVDWNPLD----DNLILTGSAD-----N 159 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~----~~~l~~~~~d-----g 159 (309)
...+.++|.|+| .++++ ..+|.|.+++ .++....... .........|+++| + +.++++-... +
T Consensus 31 ~~P~~ia~~pdG-~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDG-GMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTS-CEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCC-eEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCCCCCcc
Confidence 356799999998 65554 5669999998 3332111111 12235678999999 6 3444443322 5
Q ss_pred cEEEEecCCCCCCCCCCce-eeec---cCCCCeeEEEEecCCCcEEEEec
Q 021657 160 SVRMFDRRNLTSNGVGSPI-NKFE---GHSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 160 ~i~i~d~~~~~~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
.|..|+........ .+.+ ..+. ........|+|.|+|. |+++-+
T Consensus 106 ~v~r~~~~~~~~~~-~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVL-DRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEE-EEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECC
T ss_pred EEEEEEeCCCCcCc-eEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEEC
Confidence 67777776310000 1111 1232 1112346899999996 565543
No 308
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.91 E-value=0.12 Score=41.74 Aligned_cols=113 Identities=19% Similarity=0.257 Sum_probs=74.9
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCc----------ceEEEeec------cCCceeEEEeccC--CCCeEEE
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS----------PVIKVEKA------HDADLHCVDWNPL--DDNLILT 154 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----------~~~~~~~~------~~~~v~~~~~~~~--~~~~l~~ 154 (309)
.|..+..+|+| .+||..+. ..|.|-.+..+.. .....+.- ...+|..+.|+|. .+..|++
T Consensus 67 ~i~qlvlSpsG-~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTS-SEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCC-CEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 56779999999 77777654 5788888873321 01122221 2567999999993 2358999
Q ss_pred EcCCCcEEEEecCCCCCCCCCCceeeec---------cCCCCeeEEEEecCCCcEEEE-ecCCCcEEE
Q 021657 155 GSADNSVRMFDRRNLTSNGVGSPINKFE---------GHSAAVLCVQWSPDKSSVFGS-SAEDGLLNI 212 (309)
Q Consensus 155 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~-~~~dg~i~i 212 (309)
-..|+.||+||+..... ++. .+. .....|.+++|.+++-.|++. .+++|-|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~----~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQE----KPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTS----CCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCC----CCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999987332 222 221 223568899999988766532 346677653
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.83 E-value=0.11 Score=40.10 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=55.5
Q ss_pred cEEEEEcCC-----CeEEEEEcCCCC---cceEEEeeccCCceeEEEeccCCCCeEEEEcCC-----CcEEEEecCCCCC
Q 021657 105 QEFCSVGDD-----SCLILWDARVGT---SPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-----NSVRMFDRRNLTS 171 (309)
Q Consensus 105 ~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~ 171 (309)
.+++.|+.+ ..+.+||..+.+ ......+........++.+ ++.+++.|+.+ ..+.+||+.+..
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~- 139 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQ- 139 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTTTE-
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCCCCe-
Confidence 677777754 468899988776 4333222221222222222 56777777654 358889987632
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCc
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEK 217 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~ 217 (309)
...+..+.........+.+ ++. +++.|+.+ ..+.+||+.+
T Consensus 140 ---W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 140 ---WSMLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp ---EEEEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTT
T ss_pred ---EEECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCC
Confidence 2333333222222222222 444 66677654 4588888876
No 310
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.81 E-value=0.15 Score=41.36 Aligned_cols=189 Identities=12% Similarity=0.167 Sum_probs=108.6
Q ss_pred CCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccC----CceeEEEec
Q 021657 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD----ADLHCVDWN 145 (309)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~v~~~~~~ 145 (309)
+..+.+++..+...+....- ...|.--.|-.+. .|+-.+ +..|+-|++.... .+.+.+..|. ..|.....+
T Consensus 85 g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s-~P~kvFdR~~~L~~~QIInY~~d 159 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTD 159 (494)
T ss_dssp TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSC-CCEEEEECCGGGTTCEEEEEEEC
T ss_pred CCeEEEEchHHhhhhcceec-CCCceEEEecCCC--eEEEEc-CCeeEEecccCCC-CchhheecchhcccceEEEEEEC
Confidence 45556666666655554443 3457667776654 344443 4579999997543 3455555443 467777888
Q ss_pred cCCCCeEEEEcC-------CCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecC--CCcEEEEecCC---CcEEEE
Q 021657 146 PLDDNLILTGSA-------DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD--KSSVFGSSAED---GLLNIW 213 (309)
Q Consensus 146 ~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~d---g~i~iw 213 (309)
+ +.++++..+- .|.+.+|..+. +.-+.+++|......+.+..+ ...+++-+... +.++|-
T Consensus 160 ~-~~kW~~l~GI~~~~~~v~G~mQLYS~er-------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~ 231 (494)
T 1bpo_A 160 A-KQKWLLLTGISAQQNRVVGAMQLYSVDR-------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 231 (494)
T ss_dssp T-TSSEEEEEEEEEETTEEEEEEEEEESTT-------CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEE
T ss_pred C-CCCeEEEEeecccCCcccceEEEeeccc-------cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEE
Confidence 8 7887765432 36788998874 556677777655544433211 12345444432 789999
Q ss_pred eCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 214 DYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 214 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
++...........+. .....+.-....+-..++..++..+.+++.... |.|++||+..
T Consensus 232 Ei~~~~~~~~~f~kk---~vdv~fppe~~~DFPvamqvs~kygviyviTK~--------G~i~lyDleT 289 (494)
T 1bpo_A 232 EVGTPPTGNQPFPKK---AVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY--------GYIHLYDLET 289 (494)
T ss_dssp ECSCCCTTCCCCCCE---EEECCCCTTSTTCCEEEEEEETTTTEEEEEETT--------SEEEEEETTT
T ss_pred EcCCCccCCCCccce---eeeeeCCcccccCceeEEEecccCCEEEEEecC--------ceEEEEeccc
Confidence 986531110000000 001111112234455678888877766655444 8999999993
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.78 E-value=0.12 Score=39.88 Aligned_cols=103 Identities=12% Similarity=0.101 Sum_probs=53.5
Q ss_pred cEEEEEcCC-----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC-----cEEEEecCCCCCCCC
Q 021657 105 QEFCSVGDD-----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN-----SVRMFDRRNLTSNGV 174 (309)
Q Consensus 105 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~ 174 (309)
.+++.|+.+ ..+.+||..+.+......+....... +++.. ++.+++.|+.++ .+.+||+.+..
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~---- 135 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNE---- 135 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTE----
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCe----
Confidence 677777754 35888998877643332222111122 22222 567777777653 47788887632
Q ss_pred CCceeeeccCCCCeeEEEEecCCCcEEEEecCC-------CcEEEEeCCc
Q 021657 175 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-------GLLNIWDYEK 217 (309)
Q Consensus 175 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-------g~i~iwd~~~ 217 (309)
...+..+....... +++.. ++. +++.|+.+ ..+.+||+..
T Consensus 136 W~~~~~~p~~r~~~-~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 136 WFHVAPMNTRRSSV-GVGVV-GGL-LYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp EEEECCCSSCCBSC-EEEEE-TTE-EEEECCEETTTTEECCCEEEEETTT
T ss_pred EeecCCCCCcccCc-eEEEE-CCE-EEEEeCCCCCCCccccEEEEEeCCC
Confidence 22222222111122 22222 344 66677643 3478888876
No 312
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.75 E-value=0.16 Score=41.01 Aligned_cols=150 Identities=12% Similarity=0.081 Sum_probs=87.6
Q ss_pred ecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc----CCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCC
Q 021657 100 CPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH----DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 175 (309)
Q Consensus 100 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 175 (309)
+.+| ..++.+ .++.||.-++.... ..+.+... -..|..+..+| +|.+||..+ +..|.|..+.........
T Consensus 29 ~~n~-t~i~~a-~~n~iR~~~i~~~~--~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 29 SQNG-TRIVFI-QDNIIRWYNVLTDS--LYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp ETTT-TEEEEE-ETTEEEEEETTTCS--SCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCC
T ss_pred EcCC-CEEEEE-ECCEEEEEECCCCC--cceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcc
Confidence 3444 334433 34788888876443 23333322 23688899999 999999986 558999888742211100
Q ss_pred ------Cceeeecc------CCCCeeEEEEecCCCc--EEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC
Q 021657 176 ------SPINKFEG------HSAAVLCVQWSPDKSS--VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 241 (309)
Q Consensus 176 ------~~~~~~~~------~~~~v~~~~~~~~~~~--l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
-..+.+.- ...+|..+.|+|-+.. .+++-..|+.|++||+........... ... ..+....
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~----k~~-~~fg~d~ 177 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLN----KPN-NSFGLDA 177 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEES----CCC-SEEESCS
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchh----ccc-cccCCCc
Confidence 11122221 2567999999996532 345777899999999987221111000 011 1223344
Q ss_pred CCcceeeEEEccCCCeEEE
Q 021657 242 HRDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 242 ~~~~v~~~~~~~~~~~~~~ 260 (309)
....|.+++|..++=.|.+
T Consensus 178 ~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 178 RVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp SCCCEEEEEECTTSSCEEE
T ss_pred ccceEEEEEEcCCCcEEEE
Confidence 5577899999986544443
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.68 E-value=0.15 Score=39.55 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=52.9
Q ss_pred cEEEEEcC----C-----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-----CcEEEEecCCCC
Q 021657 105 QEFCSVGD----D-----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-----NSVRMFDRRNLT 170 (309)
Q Consensus 105 ~~l~s~~~----d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 170 (309)
.+++.|+. + ..+.+||..+.+......+.........+.+ ++.+++.|+.+ ..+.+||+.+..
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 66777665 2 4688899877663222222111112222222 56777777644 357889987632
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCc
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEK 217 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~ 217 (309)
...+..+.........+.+ ++. +++.|+.+ ..+.+||+..
T Consensus 149 ----W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 149 ----WHLVAPMLTRRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp ----EEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTT
T ss_pred ----EeECCCCCccccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeCCC
Confidence 2222222211112222222 344 67677654 4588888876
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.60 E-value=0.061 Score=39.19 Aligned_cols=106 Identities=7% Similarity=0.077 Sum_probs=61.7
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcc----eEEEe-e-ccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP----VIKVE-K-AHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~-~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
.+.+++|+|+| .+.+. .+|.+.-.+..+.... ....+ . +.. ...++.|.| ++.+.++ .||.|+-++.
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~-~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDP-NGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECT-TSCEEEE--ETTEEEEESC
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECC-CCCEEEe--CCCEEEEeCC
Confidence 67799999987 65555 7787766665442210 00111 0 111 247899999 8888887 5698887765
Q ss_pred CCCCCCCCCCcee--ee--ccCCCCeeEEEEecCCCcEEEEecCCCcEE
Q 021657 167 RNLTSNGVGSPIN--KF--EGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 211 (309)
Q Consensus 167 ~~~~~~~~~~~~~--~~--~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~ 211 (309)
.+... ..-+. .. ...=..+..|.+.|+|. |.+.. |+.++
T Consensus 115 P~~~~---~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~ly 157 (236)
T 1tl2_A 115 PQSDT---DNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFY 157 (236)
T ss_dssp CCSTT---CCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEE
T ss_pred CcCCC---CceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEE
Confidence 33110 10000 11 00113578999999998 56555 77743
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.56 E-value=0.18 Score=39.00 Aligned_cols=103 Identities=6% Similarity=0.013 Sum_probs=55.0
Q ss_pred cEEEEEcCC----CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC------CcEEEEecCCCCCCCC
Q 021657 105 QEFCSVGDD----SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD------NSVRMFDRRNLTSNGV 174 (309)
Q Consensus 105 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~ 174 (309)
.+++.|+.+ ..+.+||..+.+......+.........+.+ ++.+++.|+.+ ..+.+||..+..
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~---- 129 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTES---- 129 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTE----
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCc----
Confidence 677777754 6788999887764333222211122222222 56777887765 458889988632
Q ss_pred CCceeeeccCCCCeeEEEEecCCCcEEEEecC---------CCcEEEEeCCc
Q 021657 175 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE---------DGLLNIWDYEK 217 (309)
Q Consensus 175 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------dg~i~iwd~~~ 217 (309)
...+..+........ ++. -++. +++.|+. -..+.+||..+
T Consensus 130 W~~~~~~p~~r~~~~-~~~-~~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHG-MVE-ANGL-IYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp EEEECCCSSCCBSCE-EEE-ETTE-EEEECCEESCTTTCEECCCEEEEETTT
T ss_pred eEeCCCCcCCcceeE-EEE-ECCE-EEEECCCCCCCCcccccceEEEeCCCC
Confidence 222222221111122 222 2444 6666663 34578888876
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.52 E-value=0.2 Score=39.03 Aligned_cols=139 Identities=14% Similarity=0.308 Sum_probs=90.4
Q ss_pred CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEE
Q 021657 112 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 191 (309)
Q Consensus 112 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 191 (309)
++..|.|.|+..+..+..+...+ -+.-.+| ..+.+|.-. ...+.+||+++ ...+..+.- ...|.-=
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~A-----dsAIMnP-~~~ViALra-g~~LQiFnlet------K~klks~~~-~e~VvfW 112 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISA-----DSAIMNP-ASKVIALKA-GKTLQIFNIEM------KSKMKAHTM-TDDVTFW 112 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCC-----SEEEECS-SSSEEEEEE-TTEEEEEETTT------TEEEEEEEC-SSCEEEE
T ss_pred CCCEEEEEECCCCCCcccccccc-----ceeeeCC-CccEEEEec-CCeEEEechHH------hhhhcceec-CCccEEE
Confidence 34479999998877543333322 2344689 778777765 67899999999 777777764 4567666
Q ss_pred EEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecC--CCcceeeEEEccCCCeEEEEecC-CCCC
Q 021657 192 QWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG--HRDKVVDFHWNASDPWTVVSVSD-DCDS 268 (309)
Q Consensus 192 ~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~s~s~-d~~s 268 (309)
.|-.+.. ++--+ +..|+-|++.....+.. ++.... ....|..-..+++..++++.|-. . .
T Consensus 113 kWis~~~--L~lVT-~taVyHWs~~~~s~P~k------------vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~--~ 175 (365)
T 2xzh_A 113 KWISLNT--VALVT-DNAVYHWSMEGESQPVK------------MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ--Q 175 (365)
T ss_dssp EECSSSE--EEEEE-SSEEEEEESSTTCCCEE------------EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEE--T
T ss_pred EecCCCe--EEEEc-CCcEEEEcccCCCCCce------------eeecchhcccceEEEEEECCCCCEEEEEeEecc--C
Confidence 7766654 33333 56899999976332221 221111 13467777888888887776532 2 3
Q ss_pred CCCCCeEEEEEcc
Q 021657 269 TGGGGTLQIWRMS 281 (309)
Q Consensus 269 ~~~dg~v~vw~~~ 281 (309)
+...|.+.+|..+
T Consensus 176 ~~v~G~mQLYS~e 188 (365)
T 2xzh_A 176 NRVVGAMQLYSVD 188 (365)
T ss_dssp TEEEEEEEEEETT
T ss_pred CccceeEEEEeec
Confidence 4455899999997
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.47 E-value=0.24 Score=39.39 Aligned_cols=108 Identities=13% Similarity=0.097 Sum_probs=59.2
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe---eccCCceeEEEeccCC----CCeEEEEcC---C---
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE---KAHDADLHCVDWNPLD----DNLILTGSA---D--- 158 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~----~~~l~~~~~---d--- 158 (309)
.....|+|.|+| .++++ ..+|.|+++|. .++ ..+..+ .........|+++| + +.++++-.. +
T Consensus 29 ~~P~~ia~~pdG-~l~V~-e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~p-df~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGG-RYLVT-ERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHP-EFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETT-EEEEE-ETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCC-eEEEE-eCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCC-CCCcCCEEEEEEeccCCCCCc
Confidence 456899999998 65554 56699999973 333 222221 12235688999999 5 444444332 2
Q ss_pred -CcEEEEecCCCCCCC-CCCce-eeecc-CCCCeeEEEEecCCCcEEEEec
Q 021657 159 -NSVRMFDRRNLTSNG-VGSPI-NKFEG-HSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 159 -g~i~i~d~~~~~~~~-~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
..|..|+........ ..+.+ ..+.. .......|+|.|||. |+++-+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEEC
Confidence 567777765410000 00111 11221 112346799999997 565543
No 318
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.44 E-value=0.25 Score=39.24 Aligned_cols=106 Identities=13% Similarity=0.154 Sum_probs=58.8
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+.++|.|+|+++++ ..+|.|++++ . +....... +..+....
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~-~-g~~~~~~~-----------------------------------~~v~~~g~ 74 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR-E-GRLSTYAE-----------------------------------LSVYHRGE 74 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE-T-TEEEEEEE-----------------------------------CCCCCSTT
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE-C-CCccEeec-----------------------------------ceEeecCC
Confidence 369999999986555 4569999988 3 21000000 00011123
Q ss_pred CCeEEEEEecC---CCcEEEEEcCC-----CeEEEEEcCCCCc----ceEEEee---ccCCceeEEEeccCCCCeEEEEc
Q 021657 92 DTVEDVTFCPS---SAQEFCSVGDD-----SCLILWDARVGTS----PVIKVEK---AHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 92 ~~v~~~~~~~~---~~~~l~s~~~d-----g~i~iwd~~~~~~----~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
.....|+|+|+ ++.++++-... +.|..++...... .....+. ........++|.| ++.++++-+
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G 153 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTG 153 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEEC
Confidence 45788999998 43555544432 6788888764321 1111122 1112346899999 887666643
No 319
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.34 E-value=0.45 Score=44.85 Aligned_cols=234 Identities=12% Similarity=0.160 Sum_probs=123.6
Q ss_pred CCCcEEEEeCCccccccccCC-ccccccCCCCceeecCCCCCCCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEE
Q 021657 29 KDKSVVLWSIQDHITSSATDP-ATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEF 107 (309)
Q Consensus 29 ~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 107 (309)
...+|.|-|+.++........ ...........+..+- .+..+.+++..+...+....- ..+|.--.|-... .|
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALr---ag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~--~l 119 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK---AGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TV 119 (1630)
T ss_pred CCceEEEEECCCCCCcccccccchhhccCCCcceEEEe---cCCeEEEeehHHhhhhccccc-CCCceEEEecCCC--ee
Confidence 344777888887644432221 1111222222222222 256677777766666555443 3456666776554 34
Q ss_pred EEEcCCCeEEEEEcCCCCcceEEEeecc----CCceeEEEeccCCCCeEEEEc-------CCCcEEEEecCCCCCCCCCC
Q 021657 108 CSVGDDSCLILWDARVGTSPVIKVEKAH----DADLHCVDWNPLDDNLILTGS-------ADNSVRMFDRRNLTSNGVGS 176 (309)
Q Consensus 108 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~ 176 (309)
+-.+ +..|.-|++.... .+.+.+..| ...|.....++ +.++++..+ -.|.+.+|..+. +
T Consensus 120 ~lVT-~~aVyHW~~~~~s-~P~k~fdR~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er-------~ 189 (1630)
T 1xi4_A 120 ALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR-------K 189 (1630)
T ss_pred EEEc-CCeEEEeccCCCC-ccHHHHhcchhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeeccc-------c
Confidence 4333 3579999996533 234444444 45677777888 777766443 347888888874 3
Q ss_pred ceeeeccCCCCeeEEEEe--cCCCcEEEEecC---CCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEE
Q 021657 177 PINKFEGHSAAVLCVQWS--PDKSSVFGSSAE---DGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHW 251 (309)
Q Consensus 177 ~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 251 (309)
.-+.+.+|......+... +....+++.+.. .+.++|-++...........+. .....+.-....+-..++..
T Consensus 190 ~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk---~~~~~~~~~~~~Dfpv~~~v 266 (1630)
T 1xi4_A 190 VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK---AVDVFFPPEAQNDFPVAMQI 266 (1630)
T ss_pred cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccc---cccccCCcccccCcceEEEe
Confidence 445566665544433332 222234433322 2689999986531111100000 01111111222344566777
Q ss_pred ccCCCeEEEEecCCCCCCCCCCeEEEEEccccccCChhhHhHhh
Q 021657 252 NASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPQDEVLAEL 295 (309)
Q Consensus 252 ~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~~~~~~~~~~~~~~ 295 (309)
++..+.+++.... |.+.++|+. ++.++..-
T Consensus 267 s~k~g~iy~itk~--------G~~~~~d~~------t~~~i~~~ 296 (1630)
T 1xi4_A 267 SEKHDVVFLITKY--------GYIHLYDLE------TGTCIYMN 296 (1630)
T ss_pred ccccCEEEEEecC--------ceEEEEecc------cchhhhhc
Confidence 8776666544333 899999999 56665543
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.22 E-value=0.25 Score=39.24 Aligned_cols=75 Identities=15% Similarity=0.208 Sum_probs=44.3
Q ss_pred CceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeee----ccCCCCeeEEEEecC---CCcEEEEecC---
Q 021657 137 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF----EGHSAAVLCVQWSPD---KSSVFGSSAE--- 206 (309)
Q Consensus 137 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~~~--- 206 (309)
.....|+|.| +++.|+++...|.|++++..... ...+..+ .........|+++|+ +.+++++-..
T Consensus 18 ~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~g~~----~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLITLRGGELRHWQAGKGL----SAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECS-TTCCEEEEETTTEEEEEETTTEE----CCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcC-CCCEEEEEeCCceEEEEeCCCce----eeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 4568999999 88834445568999999853210 0111111 122345789999996 5556655433
Q ss_pred ----CCcEEEEeCC
Q 021657 207 ----DGLLNIWDYE 216 (309)
Q Consensus 207 ----dg~i~iwd~~ 216 (309)
...|..|++.
T Consensus 93 ~g~~~~~v~r~~~~ 106 (353)
T 2g8s_A 93 DGKAGTAVGYGRLS 106 (353)
T ss_dssp SSCEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEC
Confidence 2345555554
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.19 E-value=0.15 Score=40.38 Aligned_cols=51 Identities=14% Similarity=0.019 Sum_probs=28.6
Q ss_pred CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC------CCcEEEEec
Q 021657 114 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA------DNSVRMFDR 166 (309)
Q Consensus 114 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~i~d~ 166 (309)
..+.+||..+.+......+......-.+++.. ++.+++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEe
Confidence 57899999887754443322111111233332 5677777764 345777876
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.12 E-value=0.25 Score=36.09 Aligned_cols=111 Identities=13% Similarity=0.102 Sum_probs=58.7
Q ss_pred eEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcce-----EEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 94 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-----IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
-.++.|.|+| .+.++ .||.|.-++..+..... ...-...=..+..|.+.| ++.+.++. |+.++ ....
T Consensus 90 F~a~~fD~~G-~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~ly--r~~~ 161 (236)
T 1tl2_A 90 FQFLFFDPNG-YLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFY--KALP 161 (236)
T ss_dssp CSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEE--EECC
T ss_pred ceEEEECCCC-CEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEE--ecCC
Confidence 3688999998 55555 56999877753322110 111111224679999999 88888777 77743 3222
Q ss_pred CCCCCCCC--ceeeec-cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 169 LTSNGVGS--PINKFE-GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 169 ~~~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+......- ....+. ..-..-+.+.|.+++. |+++. ++. +|....
T Consensus 162 P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~--~Y~~~~ 208 (236)
T 1tl2_A 162 PVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGK--FYEDYP 208 (236)
T ss_dssp CSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTE--EEEESC
T ss_pred CCCCCcccccccceeccCCcceEEEEEECCCCc-EEEEe--CCe--EEecCC
Confidence 21110000 001111 1122344567889887 45443 664 454443
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.06 E-value=0.5 Score=39.01 Aligned_cols=28 Identities=14% Similarity=0.109 Sum_probs=21.1
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCC
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQ 39 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~ 39 (309)
.+.|+|.|+|+++++-...+.|++++..
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 4799999999977765544578877754
No 324
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.01 E-value=0.4 Score=37.54 Aligned_cols=108 Identities=9% Similarity=0.115 Sum_probs=62.4
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec--CCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR--RNL 169 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~--~~~ 169 (309)
..+..+.+.+++ ..++.+ .+|.|.. ....++. -..........+..+.+.| ++.+++.+...+..+-.|- .+
T Consensus 122 ~~~~~i~~~~~~-~~~~~~-~~g~v~~-S~DgG~t-W~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~t- 195 (327)
T 2xbg_A 122 GSPRLIKALGNG-SAEMIT-NVGAIYR-TKDSGKN-WQALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQTA- 195 (327)
T ss_dssp SCEEEEEEEETT-EEEEEE-TTCCEEE-ESSTTSS-EEEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTCSS-
T ss_pred CCeEEEEEECCC-CEEEEe-CCccEEE-EcCCCCC-CEEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCCCc-
Confidence 346677777766 656555 4554432 1222331 2223334456788999999 7777777654443444443 22
Q ss_pred CCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEe
Q 021657 170 TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd 214 (309)
.+.+. ......+..+.+.+++. ++ ..+.+|.+++.+
T Consensus 196 -----W~~~~--~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~ 231 (327)
T 2xbg_A 196 -----WEPHN--RTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSD 231 (327)
T ss_dssp -----CEEEE--CCSSSCEEEEEECTTSC-EE-EEETTTEEEEEE
T ss_pred -----eeECC--CCCCCccceeEECCCCC-EE-EEeCCceEEEec
Confidence 33332 22356788999999987 45 444578877764
No 325
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.80 E-value=0.54 Score=37.35 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=57.8
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
.+.++|.|+|+++++ ..+|.|++++.. +. . .... +.......
T Consensus 31 P~~ia~~pdG~l~V~-e~~g~I~~~d~~-G~-~-~~~~----------------------------------~~v~~~g~ 72 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVT-ERPGRLVLISPS-GK-K-LVAS----------------------------------FDVANVGE 72 (354)
T ss_dssp EEEEEEEETTEEEEE-ETTTEEEEECSS-CE-E-EEEE----------------------------------CCCCCSTT
T ss_pred CeEEEEcCCCeEEEE-eCCCEEEEEeCC-Cc-e-Eeec----------------------------------cceeecCC
Confidence 479999999985554 556999888732 21 0 0000 00011112
Q ss_pred CCeEEEEEecC---CCcEEEEEcC---C----CeEEEEEcCCC--Cc---ce-EEEeec-cCCceeEEEeccCCCCeEEE
Q 021657 92 DTVEDVTFCPS---SAQEFCSVGD---D----SCLILWDARVG--TS---PV-IKVEKA-HDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 92 ~~v~~~~~~~~---~~~~l~s~~~---d----g~i~iwd~~~~--~~---~~-~~~~~~-~~~~v~~~~~~~~~~~~l~~ 154 (309)
.....|+++|+ +..++++-.. + ..|..|+.... .. .. ...+.. .......|+|.| ++.++++
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt 151 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYIT 151 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEE
Confidence 45788999997 4355554432 3 56777877544 10 01 111211 112346799999 8887766
Q ss_pred Ec
Q 021657 155 GS 156 (309)
Q Consensus 155 ~~ 156 (309)
-+
T Consensus 152 ~G 153 (354)
T 3a9g_A 152 TG 153 (354)
T ss_dssp CC
T ss_pred EC
Confidence 43
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.58 E-value=0.59 Score=36.23 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=53.6
Q ss_pred cEEEEEcCC--------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC-C-----CcEEEEecCCCC
Q 021657 105 QEFCSVGDD--------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-D-----NSVRMFDRRNLT 170 (309)
Q Consensus 105 ~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-----g~i~i~d~~~~~ 170 (309)
.+++.|+.+ ..+.+||..+.+......+...... .+++. - ++.+++.|+. + ..+.+||+.+..
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-H-MDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-E-TTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-E-CCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 667777632 4588999887663222222111111 22222 2 5677888876 2 468899988632
Q ss_pred CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCC-----cEEEEeCCc
Q 021657 171 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG-----LLNIWDYEK 217 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg-----~i~iwd~~~ 217 (309)
...+..+........++.+ ++. +++.|+.++ .+.+||+.+
T Consensus 177 ----W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 177 ----WKELAPMQTARSLFGATVH--DGR-IIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp ----EEECCCCSSCCBSCEEEEE--TTE-EEEEEEECSSSEEEEEEEEETTT
T ss_pred ----EEECCCCCCchhceEEEEE--CCE-EEEEeccCCCCccceEEEEECCC
Confidence 2222222211111222222 444 666776554 478888876
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.51 E-value=0.63 Score=36.09 Aligned_cols=92 Identities=11% Similarity=0.057 Sum_probs=45.1
Q ss_pred EEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC--------CcEEEEecCCCCCCCCCCceeeeccCCCC
Q 021657 116 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD--------NSVRMFDRRNLTSNGVGSPINKFEGHSAA 187 (309)
Q Consensus 116 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 187 (309)
+..||..+.+......+...... .+++.. ++.+++.|+.+ ..+.+||..+.. .+.+..+......
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~ 141 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCL-FGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK----WGESDPLPYVVYG 141 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEES-CEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE----EEECCCCSSCCBS
T ss_pred eEEecCCCCeEEECCCCCcchhc-eeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc----EeECCCCCCcccc
Confidence 77888877663222111111111 122222 56777777742 458889987632 2222222211111
Q ss_pred eeEEEEecCCCcEEEEecC-C-----CcEEEEeCCc
Q 021657 188 VLCVQWSPDKSSVFGSSAE-D-----GLLNIWDYEK 217 (309)
Q Consensus 188 v~~~~~~~~~~~l~~~~~~-d-----g~i~iwd~~~ 217 (309)
. +++. -++. +++.|+. + ..+.+||..+
T Consensus 142 ~-~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 142 H-TVLS-HMDL-VYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp C-EEEE-ETTE-EEEECCBCTTSCBCCCEEEEETTT
T ss_pred e-eEEE-ECCE-EEEEeCCCCCCcccceEEEEeCCC
Confidence 2 2222 3444 6667765 2 4588888876
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.40 E-value=0.7 Score=35.89 Aligned_cols=103 Identities=11% Similarity=0.131 Sum_probs=51.9
Q ss_pred cEEEEEcCC-------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcC------CCcEEEEecCCCCC
Q 021657 105 QEFCSVGDD-------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA------DNSVRMFDRRNLTS 171 (309)
Q Consensus 105 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~ 171 (309)
.+++.|+.+ ..+.+||..+.+......+...... .+++. . ++.+++.|+. -..+.+||+.+..
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~- 186 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGD- 186 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-E-TTEEEEECCEESSSCBCCCEEEEETTTTE-
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCCE-
Confidence 677777653 3578888877664322211111111 12222 2 6777777764 2358899988732
Q ss_pred CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC-----CcEEEEeCCc
Q 021657 172 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED-----GLLNIWDYEK 217 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-----g~i~iwd~~~ 217 (309)
...+..+....... +++.. ++. +++.|+.+ ..+.+||+.+
T Consensus 187 ---W~~~~~~p~~r~~~-~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 187 ---WKDLAPMKTPRSMF-GVAIH-KGK-IVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp ---EEEECCCSSCCBSC-EEEEE-TTE-EEEEEEEETTEEEEEEEEEETTT
T ss_pred ---EEECCCCCCCcccc-eEEEE-CCE-EEEEcCcCCCCccceEEEEECCC
Confidence 22222222111112 22222 344 66677643 3467888776
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.38 E-value=1.3 Score=38.88 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=60.5
Q ss_pred CCCcEEEEEcCC------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCC--cEEEEecCCCCCCC
Q 021657 102 SSAQEFCSVGDD------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADN--SVRMFDRRNLTSNG 173 (309)
Q Consensus 102 ~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~ 173 (309)
++ .+++.|+.+ ..+.+||..+.++.....+... ..-.+++... ++.+++.|+.++ .+.+||..+..
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~--- 524 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEI--- 524 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTE---
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCc---
Confidence 45 677777743 3578899887664322222111 1122333333 678888887755 68999988732
Q ss_pred CCCceee---eccCCCCeeEEEEecCCCcEEEEecC--C-----CcEEEEeCCc
Q 021657 174 VGSPINK---FEGHSAAVLCVQWSPDKSSVFGSSAE--D-----GLLNIWDYEK 217 (309)
Q Consensus 174 ~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~--d-----g~i~iwd~~~ 217 (309)
...+.. +........++.+..+...+++.|+. + ..+.+||+..
T Consensus 525 -W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 525 -FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp -EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred -eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 222221 11122223345666653446777765 2 4588899877
No 330
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.34 E-value=0.8 Score=36.19 Aligned_cols=117 Identities=14% Similarity=0.150 Sum_probs=63.9
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEe----eccCCceeEEEeccC---CCCeEEEE--cC
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE----KAHDADLHCVDWNPL---DDNLILTG--SA 157 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~~l~~~--~~ 157 (309)
+...-...+.|+|.|+| .++++--..|.|++++...++...+..+ .........|+++|+ ++.+.++- ..
T Consensus 27 va~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 27 VATGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred eecCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 33334567899999998 7777765589999998655552222211 123456789999982 24444432 23
Q ss_pred CCcEEEEecCCCC----CCCCCCce-eeec-cCCCCeeEEEEecCCCcEEEEec
Q 021657 158 DNSVRMFDRRNLT----SNGVGSPI-NKFE-GHSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 158 dg~i~i~d~~~~~----~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
++.|.-|.+.... .....+.+ ..+. .....-..|.|.|||. |+++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEEC
Confidence 4455555554311 00001111 1222 1122346799999997 555543
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.19 E-value=0.91 Score=36.01 Aligned_cols=28 Identities=21% Similarity=0.312 Sum_probs=21.0
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCC
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQ 39 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~ 39 (309)
.+.|+|.|+|++|+.+...|.|++++..
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 3699999999834445567999988854
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.14 E-value=1.1 Score=36.88 Aligned_cols=111 Identities=10% Similarity=0.162 Sum_probs=59.9
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec------cCCceeEEEeccCC---CCeEEEEcC-----
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA------HDADLHCVDWNPLD---DNLILTGSA----- 157 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~~---~~~l~~~~~----- 157 (309)
...+.|+|.|+| .++++-...+.|++++...+....+..+.. ....+..|+|+| + +..|.....
T Consensus 27 ~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P-df~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP-DFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT-TTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC-CcCcCCEEEEEEeccccC
Confidence 456799999998 766665444578888765555222222211 245677999999 4 444444332
Q ss_pred --------CCcEEEEecCCCCCC-CCCCcee-eecc-CCCCeeEEEEecCCCcEEEEec
Q 021657 158 --------DNSVRMFDRRNLTSN-GVGSPIN-KFEG-HSAAVLCVQWSPDKSSVFGSSA 205 (309)
Q Consensus 158 --------dg~i~i~d~~~~~~~-~~~~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~ 205 (309)
...|.-|+....... ...+.+. .+.. .......|+|.|||. |+++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 124555554321000 0011121 1221 123468999999998 555544
No 333
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.67 E-value=1.4 Score=41.18 Aligned_cols=157 Identities=6% Similarity=0.034 Sum_probs=87.9
Q ss_pred CCeEEEEE---ecCCCcEEEEEc----------CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC
Q 021657 92 DTVEDVTF---CPSSAQEFCSVG----------DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 92 ~~v~~~~~---~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
..+.+++. ..+...+|+.|. ..|.|.++++...+...+. ....++++++++-- +|. |++| ..
T Consensus 829 E~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~-~~~v~g~v~al~~~--~g~-Lla~-ig 903 (1158)
T 3ei3_A 829 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVA-EKEVKGAVYSMVEF--NGK-LLAS-IN 903 (1158)
T ss_dssp EEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEE-EEEESSCEEEEEEE--TTE-EEEE-ET
T ss_pred cceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEE-EEEcCCcCEEEeee--CCE-EEEE-cC
Confidence 34455543 333346777776 3588999999744422222 23446788888754 454 4443 35
Q ss_pred CcEEEEecCCCCCCCCCCcee-eeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 159 NSVRMFDRRNLTSNGVGSPIN-KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 159 g~i~i~d~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
..|++|++.. .+.++ ..... ..+..+.....+.+ ++.|..-..+.++..+..... -...
T Consensus 904 ~~l~vy~l~~------~~~L~~~~~~~-~~i~~~~l~~~~~~-I~vgD~~~Sv~~~~y~~~~~~------------L~~~ 963 (1158)
T 3ei3_A 904 STVRLYEWTT------EKELRTECNHY-NNIMALYLKTKGDF-ILVGDLMRSVLLLAYKPMEGN------------FEEI 963 (1158)
T ss_dssp TEEEEEEECT------TSCEEEEEEEC-CCSCEEEEEEETTE-EEEEESSBCEEEEEEETTTTE------------EEEE
T ss_pred CEEEEEECCC------CceEEEEeecc-ccEEEEEEeccCCE-EEEEEhhheEEEEEEEcCCCe------------EEEE
Confidence 7899999986 43333 11111 12333344344554 457776677777665541111 1122
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.-..+..+++++.+-.++ .++ .+..+|.+.+.....
T Consensus 964 a~D~~~~~vta~~~ld~~-t~l--------~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDDD-NFL--------GAENAFNLFVCQKDS 999 (1158)
T ss_dssp EECCSCBCEEEEEEEETT-EEE--------EEETTSEEEEEEECT
T ss_pred EeecccccEEEEEEEccC-cEE--------EEcCCCcEEEEecCC
Confidence 223456678888887544 444 233458999998874
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.45 E-value=1.4 Score=34.75 Aligned_cols=110 Identities=10% Similarity=0.124 Sum_probs=61.2
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEeCCccccccccCCccccccCCCCceeecCCCCCCCCcccCCCCCcCccccccccc
Q 021657 12 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 91 (309)
Q Consensus 12 V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (309)
-+.|+|.|+|.++++--..|.|++++..++....... ....+....
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~----------------------------------~~~v~~~g~ 79 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGE----------------------------------VPGVSPSGE 79 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE----------------------------------CTTCCCBTT
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecc----------------------------------cCceeecCC
Confidence 4799999999988777668999988764321100000 000112234
Q ss_pred CCeEEEEEecC---CCcEEEEE--cCCCeEEEEEcCCC-----C---cceE-EEee-ccCCceeEEEeccCCCCeEEEEc
Q 021657 92 DTVEDVTFCPS---SAQEFCSV--GDDSCLILWDARVG-----T---SPVI-KVEK-AHDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 92 ~~v~~~~~~~~---~~~~l~s~--~~dg~i~iwd~~~~-----~---~~~~-~~~~-~~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
.....|+++|+ +..++++- ..++.|.-|.+... . ...+ ..+. ........|.|.| ++.++++.+
T Consensus 80 ~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~G 158 (347)
T 3das_A 80 GGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTG 158 (347)
T ss_dssp BSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECB
T ss_pred CCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEEC
Confidence 56789999985 32444432 24556666666541 1 1111 1121 1112346799999 888777754
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.06 E-value=1.6 Score=33.81 Aligned_cols=103 Identities=13% Similarity=0.082 Sum_probs=50.0
Q ss_pred cEEEEEcC----CC-------eEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC-------CcEEEEec
Q 021657 105 QEFCSVGD----DS-------CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD-------NSVRMFDR 166 (309)
Q Consensus 105 ~~l~s~~~----dg-------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~i~d~ 166 (309)
.+++.|+. ++ .+..||..+.+......+....... +++.. ++.+++.|+.+ ..+.+||+
T Consensus 58 ~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 58 QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF-GLGEV--DDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp CEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC-EEEEE--TTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc-ceEEE--CCEEEEEcCccCCCCcccceEEEEeC
Confidence 67777773 12 2778888776632222121111122 22222 56777777754 24778888
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC------CCcEEEEeCCc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE------DGLLNIWDYEK 217 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------dg~i~iwd~~~ 217 (309)
.+.. ...+..+......- +++. .++. +++.|+. -..+.+||..+
T Consensus 135 ~~~~----W~~~~~~p~~r~~~-~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 135 VAAK----WSEVKNLPIKVYGH-NVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTTE----EEEECCCSSCEESC-EEEE-ETTE-EEEECCEESSSCBCCCEEEEETTT
T ss_pred CCCC----EeECCCCCCccccc-EEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCC
Confidence 7632 22222221111111 2222 3444 6667764 23588899876
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.67 E-value=1.2 Score=42.26 Aligned_cols=142 Identities=14% Similarity=0.278 Sum_probs=89.3
Q ss_pred CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEE
Q 021657 112 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 191 (309)
Q Consensus 112 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 191 (309)
....|.|.|+..+..+..+...+ -+.-.+| ..+.++.-. ..++.|||+.+ ...+..+.- ..+|.-=
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~A-----dsAIMnP-~~~iiALra-g~~lQiFnl~~------k~klks~~~-~e~VvfW 111 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISA-----DSAIMNP-ASKVIALKA-GKTLQIFNIEM------KSKMKAHTM-TDDVTFW 111 (1630)
T ss_pred CCceEEEEECCCCCCcccccccc-----hhhccCC-CcceEEEec-CCeEEEeehHH------hhhhccccc-CCCceEE
Confidence 33478888988776433222222 2334688 777777664 78999999998 666666654 3456556
Q ss_pred EEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEEEec-CCCCCCC
Q 021657 192 QWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVS-DDCDSTG 270 (309)
Q Consensus 192 ~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s-~d~~s~~ 270 (309)
.|-.+.. ++..+ +..|+-|++.....+.....+.. .+. ...|..-.-+++..++++.|- .+ .+.
T Consensus 112 kWis~~~--l~lVT-~~aVyHW~~~~~s~P~k~fdR~~--------~L~--~~QIinY~~d~~~kW~~l~gi~~~--~~~ 176 (1630)
T 1xi4_A 112 KWISLNT--VALVT-DNAVYHWSMEGESQPVKMFDRHS--------SLA--GCQIINYRTDAKQKWLLLTGISAQ--QNR 176 (1630)
T ss_pred EecCCCe--eEEEc-CCeEEEeccCCCCccHHHHhcch--------hcc--cCeeEEeeeCCCCCeEEEEeeccC--CCc
Confidence 6665554 33333 56899999975333222111111 111 346777888898888877663 33 566
Q ss_pred CCCeEEEEEccc
Q 021657 271 GGGTLQIWRMSD 282 (309)
Q Consensus 271 ~dg~v~vw~~~~ 282 (309)
..|.+.+|.+..
T Consensus 177 v~G~mQLyS~er 188 (1630)
T 1xi4_A 177 VVGAMQLYSVDR 188 (1630)
T ss_pred ccceeeeeeccc
Confidence 779999999983
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.64 E-value=1.8 Score=38.01 Aligned_cols=114 Identities=7% Similarity=0.021 Sum_probs=58.6
Q ss_pred CCCcEEEEEcCCC--eEEEEEcCCCCcceEEE---eeccCCceeEEEeccCCCCeEEEEcC--C-----CcEEEEecCCC
Q 021657 102 SSAQEFCSVGDDS--CLILWDARVGTSPVIKV---EKAHDADLHCVDWNPLDDNLILTGSA--D-----NSVRMFDRRNL 169 (309)
Q Consensus 102 ~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~--d-----g~i~i~d~~~~ 169 (309)
++ .+++.|+.++ .+.+||..+.+...... .........++.+....+.+++.|+. + ..+..||+.+.
T Consensus 500 ~~-~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 500 DG-NVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TS-CEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CC-EEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 45 6777777654 68999998776432221 11122233345555522667788776 2 45889999873
Q ss_pred CC--CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecC--------CCcEEEEeCCc
Q 021657 170 TS--NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE--------DGLLNIWDYEK 217 (309)
Q Consensus 170 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--------dg~i~iwd~~~ 217 (309)
.. ......+.........-.++....++. +++.|+. ...+.+||+.+
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEECCC
Confidence 20 000011111110111112233333344 6667763 34588999876
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.37 E-value=4.8 Score=37.65 Aligned_cols=113 Identities=13% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCC-----CCeEEEEcC-CCcEEEEe
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD-----DNLILTGSA-DNSVRMFD 165 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~l~~~~~-dg~i~i~d 165 (309)
..|...+.+. ..++.++ ++.+.++++..++..... ...-...|.|+++.|.. +.++++|.. |++++|++
T Consensus 514 ~~I~~As~n~---~~vvva~-g~~l~~fel~~~~L~~~~-~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 514 KNISVASCNS---SQVVVAV-GRALYYLQIHPQELRQIS-HTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCCEEEECS---SEEEEEE-TTEEEEEEEETTEEEEEE-EEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CEEEEEEeCC---CEEEEEE-CCEEEEEEeeCCceeeec-ccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 3566666543 2344444 578888887654321222 22345689999997621 368999986 99999999
Q ss_pred cCCCCCCCCCCceeeecc-CCCCeeEEEEec--CCCcEEEEecCCCcEEEEeCC
Q 021657 166 RRNLTSNGVGSPINKFEG-HSAAVLCVQWSP--DKSSVFGSSAEDGLLNIWDYE 216 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~~~dg~i~iwd~~ 216 (309)
+.. .+.+....- ......++.+.. ...+| ..|-.||.+.-+.+.
T Consensus 589 L~~------l~~~~~~~L~~~~~p~si~l~~~~~~~~L-~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 589 LPS------FELLHKEMLGGEIIPRSILMTTFESSHYL-LCALGDGALFYFGLN 635 (1158)
T ss_dssp TTT------CCEEEEEECCSSCCEEEEEEEEETTEEEE-EEEETTSEEEEEEEC
T ss_pred CCC------CCeEEEEECCCCCCCcEEEEEEeCCCcEE-EEEeCCCeEEEEEEc
Confidence 987 555543321 122445555442 23444 488889988766654
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.31 E-value=2.2 Score=32.96 Aligned_cols=101 Identities=11% Similarity=0.091 Sum_probs=56.7
Q ss_pred EEecCCCcEEEEEcCC-------------CeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEc--CC--Cc
Q 021657 98 TFCPSSAQEFCSVGDD-------------SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGS--AD--NS 160 (309)
Q Consensus 98 ~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d--g~ 160 (309)
-+++++..+..+...+ ..|+..++...+. ... .. .. +..|++ .++.|+-.. .+ ..
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~--~~l-~~--~~--~~~~s~-~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS--TVL-DP--DP--CIYASL-IGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC--EEE-EC--SC--EEEEEE-ETTEEEEEEESSSSCEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc--eEe-ec--CC--ccEEEE-eCCEEEEEeecCCCCce
Confidence 4577775555555443 4677777766552 222 11 11 236677 677666554 33 44
Q ss_pred EEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 161 VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 161 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
|+..++.. .....+..+.. .+++++++.|+.+......|..-++..
T Consensus 131 Iy~~~~dG-------s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 131 LYRIRIDG-------EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEETTS-------CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred EEEEECCC-------CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 55555543 33344443322 456888988876765566777777654
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.29 E-value=0.36 Score=40.53 Aligned_cols=80 Identities=11% Similarity=0.180 Sum_probs=54.9
Q ss_pred CCceeEEEeccCCCCeEEEEcC-CCcEEEEecCCCCC-------CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCC
Q 021657 136 DADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTS-------NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 207 (309)
Q Consensus 136 ~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 207 (309)
......+..+| +|+++++++. +.++.++|++.... ........+.+ ........+|.++| +.+.+---|
T Consensus 322 pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G-~aYTtlfid 398 (638)
T 3sbq_A 322 PKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRG-NAYTTLFID 398 (638)
T ss_dssp SSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSS-EEEEEETTT
T ss_pred CCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCC-ceEeeeeec
Confidence 45567889999 8887777655 78999999985211 00011122233 23456788999999 467788899
Q ss_pred CcEEEEeCCcc
Q 021657 208 GLLNIWDYEKV 218 (309)
Q Consensus 208 g~i~iwd~~~~ 218 (309)
..|.-|++...
T Consensus 399 SqvvkWni~~a 409 (638)
T 3sbq_A 399 SQVVKWNMEEA 409 (638)
T ss_dssp TEEEEEEHHHH
T ss_pred ceEEEEeccHH
Confidence 99999999763
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.89 E-value=2 Score=36.33 Aligned_cols=76 Identities=9% Similarity=-0.064 Sum_probs=54.4
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCC------C----cceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcE
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG------T----SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 161 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~------~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 161 (309)
.....+..+|+|...+++|--+.++.++|++.. + ...+.-...-.......+|.+ +|+...+-..|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeeecceE
Confidence 445678899999777777778999999998741 1 001111112234567889999 88777888899999
Q ss_pred EEEecCC
Q 021657 162 RMFDRRN 168 (309)
Q Consensus 162 ~i~d~~~ 168 (309)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999875
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.87 E-value=7.5 Score=32.14 Aligned_cols=64 Identities=11% Similarity=0.185 Sum_probs=38.6
Q ss_pred CceeEEEeccCCCC-eEEEEcCCCcEEEEecCCCCCCCCCCceeeec---------cCCCCeeEEEEecC---CCcEEEE
Q 021657 137 ADLHCVDWNPLDDN-LILTGSADNSVRMFDRRNLTSNGVGSPINKFE---------GHSAAVLCVQWSPD---KSSVFGS 203 (309)
Q Consensus 137 ~~v~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~---~~~l~~~ 203 (309)
...+.|+|.| ++. .|+++...|.|++++...... ...+..+. .....+..|+|+|+ ..+|+++
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~---~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIF---KEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBC---SSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCee---eeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEE
Confidence 4567999999 775 455667889999997542100 11222221 11456789999996 3335554
Q ss_pred e
Q 021657 204 S 204 (309)
Q Consensus 204 ~ 204 (309)
-
T Consensus 90 y 90 (463)
T 2wg3_C 90 Y 90 (463)
T ss_dssp E
T ss_pred E
Confidence 3
No 343
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.04 E-value=9 Score=30.68 Aligned_cols=72 Identities=14% Similarity=0.054 Sum_probs=35.8
Q ss_pred CCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCcceEEEee----------------ccCCceeEEEeccCCCCeEEE
Q 021657 92 DTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTSPVIKVEK----------------AHDADLHCVDWNPLDDNLILT 154 (309)
Q Consensus 92 ~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~l~~ 154 (309)
..|.++++.|.+ ...+..+...+.|...+-............ .....+.+|.++|.+...+..
T Consensus 115 ~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 115 DHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp CEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred cceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 357888888632 244555555565554432111111111000 112357899998844455555
Q ss_pred EcCCCcEEE
Q 021657 155 GSADNSVRM 163 (309)
Q Consensus 155 ~~~dg~i~i 163 (309)
+..++.|..
T Consensus 195 g~~~ggl~~ 203 (394)
T 3b7f_A 195 GMSSGGVFE 203 (394)
T ss_dssp EEETBEEEE
T ss_pred EECCCCEEE
Confidence 554444443
No 344
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=86.94 E-value=10 Score=30.28 Aligned_cols=65 Identities=14% Similarity=0.157 Sum_probs=34.1
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-----c--------CCceeEEEeccCCCCeEEEEcCC
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-----H--------DADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~--------~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
..+.+|.+.|..+..+..+..++.|...+- .++ ....... + ...+.++.++|.+...+.++...
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~--tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGT--DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEESS-TTS--SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEECC-CCC--CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC
Confidence 457889998753344444544444444321 222 1111110 0 12488999998445677777655
Q ss_pred C
Q 021657 159 N 159 (309)
Q Consensus 159 g 159 (309)
+
T Consensus 254 g 254 (394)
T 3b7f_A 254 G 254 (394)
T ss_dssp E
T ss_pred e
Confidence 4
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.69 E-value=14 Score=30.54 Aligned_cols=27 Identities=7% Similarity=-0.031 Sum_probs=21.6
Q ss_pred EEEEECCCCC-EEEEecCCCcEEEEeCC
Q 021657 13 FALAMCPTEP-YVLSGGKDKSVVLWSIQ 39 (309)
Q Consensus 13 ~~~~~~~~~~-~l~t~~~dg~i~vwd~~ 39 (309)
+.|+|.|+|. .|+.+...|.|++++..
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 6999999996 56666778999999753
No 346
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=85.47 E-value=14 Score=30.35 Aligned_cols=236 Identities=9% Similarity=0.032 Sum_probs=129.2
Q ss_pred EEEECCCCCEEEEecCCCcEEEEeCCccccccccCC-ccccc--cCCCCceeecCCCCCCCCcccCCCC-CcCccccccc
Q 021657 14 ALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDP-ATAKS--AGSSGSIIKQSPKPGDGNDKAADGP-SVGPRGIYNG 89 (309)
Q Consensus 14 ~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (309)
+.-++|..+.+|.-. ..++.|+|+++........- ..... .-....... .....++.|+.. ...+.+.+..
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~l----VT~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL----VTDNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEE----ECSSEEEEEESSSSCCCEEEEEC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEE----EcCCeeEEecccCCCCchhheec
Confidence 345688888777665 68999999987633322211 11110 000111111 123445666554 3345555555
Q ss_pred cc----CCeEEEEEecCCCcEEEEEc------CCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccC--CCCeEEEEcC
Q 021657 90 HE----DTVEDVTFCPSSAQEFCSVG------DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL--DDNLILTGSA 157 (309)
Q Consensus 90 ~~----~~v~~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~ 157 (309)
|. ..|.....+++.+-++++|- -.|.+.+|..+... .+.+.+|......+..... ....|..+..
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~---sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC---EEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc---cchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 43 45677777888744444443 24788999987554 6667777766655554320 1123444433
Q ss_pred C---CcEEEEecCCCC-CCCC-CCceeeec----cCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCC
Q 021657 158 D---NSVRMFDRRNLT-SNGV-GSPINKFE----GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRT 228 (309)
Q Consensus 158 d---g~i~i~d~~~~~-~~~~-~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 228 (309)
. +.+++.++..+. ..+. .+....+. ....-..++..++.-.. +..-+.-|.+++||+.+
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv-iyviTK~G~i~lyDleT----------- 289 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-VFLITKYGYIHLYDLET----------- 289 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE-EEEEETTSEEEEEETTT-----------
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE-EEEEecCceEEEEeccc-----------
Confidence 2 789999997641 1110 11111111 12334567888887774 45777899999999998
Q ss_pred cCCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 229 TNYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
..+++..+-....|-.-+-+....-+++ .... |.|.--.++
T Consensus 290 ----gt~i~~nrIs~~~iF~t~~~~~~~Gi~~-Vnr~-------GqVl~v~v~ 330 (494)
T 1bpo_A 290 ----GTCIYMNRISGETIFVTAPHEATAGIIG-VNRK-------GQVLSVCVE 330 (494)
T ss_dssp ----CCEEEEEECCSSCEEEEEEETTTTEEEE-EETT-------CEEEEEEEC
T ss_pred ----ceeeeeecccCCceEEecccCCCCcEEE-EccC-------ceEEEEEEc
Confidence 4555555544555544444433333332 2233 777666666
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.16 E-value=22 Score=32.53 Aligned_cols=31 Identities=10% Similarity=0.124 Sum_probs=25.0
Q ss_pred CeeEEEEecCCCcEEEEecCCCcEEEEeCCcc
Q 021657 187 AVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 218 (309)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~ 218 (309)
.+.+++..++..+++ +-+.|+++|+|++.+.
T Consensus 237 ~~~~~~~~~~~~~lf-tl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYNVLV-MLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTTEEE-EEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCcEEE-EEECCCEEEEEECCCC
Confidence 466777788888655 7889999999999883
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=84.26 E-value=13 Score=29.07 Aligned_cols=51 Identities=8% Similarity=0.029 Sum_probs=28.1
Q ss_pred cEEEEEcC-C---------CeEEEEEcCCCCcceEEEee-ccCCceeEEEeccCCCCeEEEEcCC
Q 021657 105 QEFCSVGD-D---------SCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTGSAD 158 (309)
Q Consensus 105 ~~l~s~~~-d---------g~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d 158 (309)
.+++.|+. + ..+.+||..+.+........ .......++. . ++.+++.|+.+
T Consensus 67 ~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~ 128 (357)
T 2uvk_A 67 NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--H-NGKAYVTGGVN 128 (357)
T ss_dssp EEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--E-TTEEEEEECCC
T ss_pred EEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--E-CCEEEEEeCcC
Confidence 66776665 2 46889998877643222222 1111222222 3 67888888765
No 349
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=83.98 E-value=12 Score=28.37 Aligned_cols=122 Identities=11% Similarity=0.046 Sum_probs=71.9
Q ss_pred cCCeEEEEEecC-CCcEEEEEcCCCeEEEEEcCCCC--c-c-eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEe
Q 021657 91 EDTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGT--S-P-VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 165 (309)
Q Consensus 91 ~~~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~--~-~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 165 (309)
...|..+.. ++ ....++..+.+|.++-..+..-. . . ....+. ..+.+..+.... +...++..+..|.+..+.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~-~~~~ill~T~~G~~~r~~ 143 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSV-DETHILLFTKKGRVARFS 143 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECC-SSCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeC-CCCEEEEEECCCEEEEEE
Confidence 345555543 32 23678889999999998875432 0 0 111122 234555555555 556777888899988877
Q ss_pred cCCCCC---CCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 166 RRNLTS---NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 166 ~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
...... ...+.....+.. ...|..+...+++.+++ ..+..|.++...+..
T Consensus 144 ~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll-~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 144 VREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLL-VITAKGRVKKISHEE 196 (276)
T ss_dssp GGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEE-EEETTSCEEEEEGGG
T ss_pred hhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEE-EEeCCCcEEEeEHHH
Confidence 654221 112333334443 34566665555555554 778899998888765
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=80.83 E-value=3.5 Score=32.40 Aligned_cols=71 Identities=20% Similarity=0.243 Sum_probs=41.0
Q ss_pred cEEEEE-cCCCeEEEEEcCCCCcceEEEeec--cCCceeEEEecc--------CCCCeEEEEcCCCcEEEEecCCCCCCC
Q 021657 105 QEFCSV-GDDSCLILWDARVGTSPVIKVEKA--HDADLHCVDWNP--------LDDNLILTGSADNSVRMFDRRNLTSNG 173 (309)
Q Consensus 105 ~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~--------~~~~~l~~~~~dg~i~i~d~~~~~~~~ 173 (309)
..++.. ..||.|..++..++.......... ...++.. .-.| ..+..+++|+.+|.+...|+++
T Consensus 57 ~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~t----- 130 (339)
T 2be1_A 57 ETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLN----- 130 (339)
T ss_dssp EEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTT-----
T ss_pred cEEEEEECCCCEEEEEECCCCcEEeeeccccceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCC-----
Confidence 334443 578999999887765221111110 1111211 0000 0356788899999999999998
Q ss_pred CCCceeeec
Q 021657 174 VGSPINKFE 182 (309)
Q Consensus 174 ~~~~~~~~~ 182 (309)
++.+.++.
T Consensus 131 -G~~~W~~~ 138 (339)
T 2be1_A 131 -GEIISAFG 138 (339)
T ss_dssp -CCEEEEES
T ss_pred -CcEEEEEe
Confidence 77777775
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=80.66 E-value=17 Score=27.91 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=55.3
Q ss_pred EEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCC--CcEEEEecCCCCCCCCC
Q 021657 98 TFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD--NSVRMFDRRNLTSNGVG 175 (309)
Q Consensus 98 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~ 175 (309)
.++++++.++.+......|..-++.... ...... .... ..+.| .+.+|+-.... ..|..-++..
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g~~--~~~l~~---~~~~-~~~~P-~g~~iy~t~~~~~~~I~~~~ldG------- 216 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTASQS--EALFYD---CNCY-KPVVL-DDTNVYYMDVNRDNAIVHVNINN------- 216 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTTTE--EEEEEC---SCEE-EEEEE-ETTEEEEEEGGGTTEEEEECSSS-------
T ss_pred EeeEECCEEEEEeCCCceEEEEECCCCC--EEEEeC---CCcc-ceeee-cCCEEEEEEcCCCcEEEEEECCC-------
Confidence 4567775666665556788888876554 222222 2222 34568 66666554433 3566666654
Q ss_pred CceeeeccCCCCeeEEEEecCCCcEEEEec-CCCcEEEEeCCc
Q 021657 176 SPINKFEGHSAAVLCVQWSPDKSSVFGSSA-EDGLLNIWDYEK 217 (309)
Q Consensus 176 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~dg~i~iwd~~~ 217 (309)
.....+. ...+ ..|+|++.+|+.+.. ..+.|..-++..
T Consensus 217 ~~~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 217 PNPVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp CCCEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred CCeEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 2333443 2233 348888988765432 334555555543
No 352
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=78.66 E-value=4.3 Score=31.91 Aligned_cols=103 Identities=10% Similarity=0.037 Sum_probs=56.7
Q ss_pred cEEEEEcCCCeEEEEEcCCCCcceEEEeecc-CCceeEEEec--cCCCCeEEEE-cCCCcEEEEecCCCCCCCCCCceee
Q 021657 105 QEFCSVGDDSCLILWDARVGTSPVIKVEKAH-DADLHCVDWN--PLDDNLILTG-SADNSVRMFDRRNLTSNGVGSPINK 180 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~ 180 (309)
.+++.++.||.|.-.|..+++ ..-.+... ..++....-. +.++..++.. +.||.|..+|..+ +.....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~--~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~------G~~~~~ 82 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGH--IIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ------GLQKLP 82 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTE--EEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT------EEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCc--EEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC------CcEEee
Confidence 468888999999999988887 33333332 1222221100 1022333333 6899999999877 543333
Q ss_pred ecc----CCCCeeE---EEE------ecCCCcEEEEecCCCcEEEEeCCc
Q 021657 181 FEG----HSAAVLC---VQW------SPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 181 ~~~----~~~~v~~---~~~------~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+.. ...++.. ..+ +.++ .+.+|+.+|.+...|+++
T Consensus 83 ~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g--~Vy~Gs~~g~l~ald~~t 130 (339)
T 2be1_A 83 LSIRQLVSTSPLHLKTNIVVNDSGKIVEDE--KVYTGSMRTIMYTINMLN 130 (339)
T ss_dssp EEHHHHHTTCSEEEECC----------CCE--EEEECEEEEEEEEEETTT
T ss_pred eccccceeccccccCCCceeecccccccCC--EEEEEecCCEEEEEECCC
Confidence 321 1122211 000 1233 345888889888888887
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.38 E-value=21 Score=27.05 Aligned_cols=167 Identities=14% Similarity=0.141 Sum_probs=86.3
Q ss_pred CCCcccCCCCCcCcccccccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCC
Q 021657 70 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 149 (309)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 149 (309)
++.++.|.......+-.-..-...|..++..... .++. . ||.|..|-.....+ . .........|..++.-.
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~al-~-~G~v~~wG~n~~gq-l-g~~~~~~~~i~~i~~G~--- 150 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SYAL-K-DGKVIAWGDDSDGQ-T-TVPAEAQSGVTALDGGV--- 150 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EEEE-E-TTEEEEEECCTTST-T-SCCGGGGSSEEEEEECS---
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EEEE-e-CCeEEEecCCCCCc-C-CCCccCCCCeEEEEccc---
Confidence 4555555443322221111123468888776543 3333 4 89999997654321 1 11112234577776543
Q ss_pred CeEEEEcCCCcEEEEecCCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCc
Q 021657 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT 229 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 229 (309)
...+.-. ||.++.|-.....+ . ..-......|..|+...+. .++. .||.++.|=....++.-.
T Consensus 151 ~~~~~l~-~G~v~~wG~n~~gq-----l-g~p~~~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~gqlg~------ 213 (282)
T 3qhy_B 151 YTALAVK-NGGVIAWGDNYFGQ-----T-TVPAEAQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRYKQTTV------ 213 (282)
T ss_dssp SEEEEEE-TTEEEEEECCTTST-----T-SCCGGGGSSEEEEEECSSE--EEEE--ETTEEEEEECCTTSTTCC------
T ss_pred CEEEEEE-CCEEEEecCCCCCC-----C-CCceecCCCeEEEEecCCE--EEEE--ECCeEEEEECCCCCCCCC------
Confidence 2223333 79999997665321 1 1111113457777665543 3434 599999998776444311
Q ss_pred CCCCceeeeecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 230 NYPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 230 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
+. .....|..++-... ..++++ | |.|+.|-...
T Consensus 214 --p~-------~~~~~v~~i~~G~~-h~~al~---~-------g~v~~wG~n~ 246 (282)
T 3qhy_B 214 --PT-------EALSGVSAIASGEW-YSLALK---N-------GKVIAWGSSR 246 (282)
T ss_dssp --CG-------GGGSSCCEEEECSS-CEEEEE---T-------TEEEEESTTC
T ss_pred --Cc-------ccCCCceEEEcCCC-EEEEEE---C-------CEEEEecCCC
Confidence 00 01124666665542 223332 3 8999998874
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.10 E-value=51 Score=30.27 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=27.0
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 125 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 125 (309)
.+.++...++. .++++-+.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCC
Confidence 56677777766 788999999999999999887
No 355
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=71.01 E-value=33 Score=30.65 Aligned_cols=63 Identities=8% Similarity=0.086 Sum_probs=39.3
Q ss_pred cCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec-------cCCceeEEEeccCCCCeEEEEc
Q 021657 91 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA-------HDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 91 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
.+.|.+|.++|..+..+..+...+.|...+ ..++ .-..+.. ....+.+|+++|.+.+.++++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~--tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTS--KWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTT--EEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCC--CeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 468999999998666777777777666554 2233 1222222 1246999999884445555543
No 356
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=66.84 E-value=68 Score=28.32 Aligned_cols=146 Identities=10% Similarity=0.134 Sum_probs=78.2
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEee----ccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK----AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 168 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 168 (309)
.|.++.. .++ . |..++.+ -|..+|..+.+ ...... .....|.++...+ ++.+.+ |+.+| +..+|..+
T Consensus 104 ~i~~i~~-~~g-~-lWigt~~-Gl~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~~G-l~~~~~~~ 174 (758)
T 3ott_A 104 DVRTMAL-QGD-T-LWLGALN-GLYTYQLQSRK--LTSFDTRRNGLPNNTIYSIIRTK-DNQIYV-GTYNG-LCRYIPSN 174 (758)
T ss_dssp CEEEEEE-ETT-E-EEEEETT-EEEEEETTTCC--EEEECHHHHCCSCSCEEEEEECT-TCCEEE-EETTE-EEEEETTT
T ss_pred eEEEEEe-cCC-c-EEEEcCC-cceeEeCCCCe--EEEeccCCCCcCCCeEEEEEEcC-CCCEEE-EeCCC-HhhCccCC
Confidence 4666654 445 4 4445555 58888987655 222201 1234688888776 565554 44444 77788765
Q ss_pred CCCCCCCCceeeecc------CCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceeeeecCC
Q 021657 169 LTSNGVGSPINKFEG------HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 242 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
.+. ..+.. ....|.++...+++..|. .|+. +-+..+|... ++.. ....+ .
T Consensus 175 ------~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lW-igt~-~Gl~~~~~~~-~~~~------------~~~~l--~ 230 (758)
T 3ott_A 175 ------GKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVW-IGTE-GYLFQYFPST-GQIK------------QTEAF--H 230 (758)
T ss_dssp ------TEE-EEECCCCCTTCSSCCEEEEEEETTTTEEE-EEEE-EEEEEEETTT-TEEE------------EEEEE--E
T ss_pred ------Cce-EEecCCCccccccceeEEEEEECCCCEEE-EEEC-CCCeEEcCCC-CeEE------------eccCC--C
Confidence 322 22211 123478888877766433 4553 4577788654 1110 01111 1
Q ss_pred CcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEcc
Q 021657 243 RDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMS 281 (309)
Q Consensus 243 ~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~ 281 (309)
...|.++...+++...+.+ . +-+.+++..
T Consensus 231 ~~~i~~i~~d~~g~lWigT--~--------~Gl~~~~~~ 259 (758)
T 3ott_A 231 NNSIKSLALDGNGDLLAGT--D--------NGLYVYHND 259 (758)
T ss_dssp EEEEEEEEECTTCCEEEEE--T--------TEEEEECCT
T ss_pred CCeEEEEEEcCCCCEEEEe--C--------CceeEEecC
Confidence 2457888888777655533 1 346666654
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.00 E-value=22 Score=33.34 Aligned_cols=30 Identities=17% Similarity=0.193 Sum_probs=20.4
Q ss_pred ceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 245 KVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 245 ~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
.+.+++..++..++ .+.+.| +++|+|++.+
T Consensus 239 ~~vs~~~~~~~~~l-ftL~~D-------~~LRiWsl~t 268 (1139)
T 4fhn_B 239 TIISMIFLSTYNVL-VMLSLD-------YKLKVLDLST 268 (1139)
T ss_dssp CBSCCEEETTTTEE-EEEBTT-------CEEEEEETTT
T ss_pred eeEEeeccCCccEE-EEEeCC-------CEEEEEECCC
Confidence 45566666656654 445555 9999999984
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=63.82 E-value=34 Score=29.29 Aligned_cols=59 Identities=19% Similarity=0.292 Sum_probs=37.9
Q ss_pred ceeEEEeccCCCCeEEEEcCC------------CcEEEEecCCCCCCCCCCceeeeccC-CCCeeEEEEecCCCcEEEE
Q 021657 138 DLHCVDWNPLDDNLILTGSAD------------NSVRMFDRRNLTSNGVGSPINKFEGH-SAAVLCVQWSPDKSSVFGS 203 (309)
Q Consensus 138 ~v~~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 203 (309)
..-.|+|+| .+++++.-..+ ..+.+.+..+ ++..+.+.+. ...++.++|+||++.||+.
T Consensus 477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~------g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT------GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTT------CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCC------CeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 346789999 88866654322 2344555554 5544444433 4679999999999987754
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.91 E-value=11 Score=33.00 Aligned_cols=33 Identities=9% Similarity=0.201 Sum_probs=26.6
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCcccccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSS 45 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~ 45 (309)
+|.++.+ +..+++|-+.|.++|+|+++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEE
Confidence 5776666 47799999999999999999875443
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=61.26 E-value=51 Score=28.15 Aligned_cols=62 Identities=16% Similarity=0.256 Sum_probs=40.0
Q ss_pred ceeEEEeccCCCCeEEEEcC------------CCcEEEEecCCCCCCCCCCceeeeccC-CCCeeEEEEecCCCcEEEEe
Q 021657 138 DLHCVDWNPLDDNLILTGSA------------DNSVRMFDRRNLTSNGVGSPINKFEGH-SAAVLCVQWSPDKSSVFGSS 204 (309)
Q Consensus 138 ~v~~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 204 (309)
....|.|++ ++.+.+.... ...+..++..+ ++....+... ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t------Gel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT------GEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTT------CCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCC------CeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456788998 7877764322 12456666655 5544444432 35689999999999888665
Q ss_pred cC
Q 021657 205 AE 206 (309)
Q Consensus 205 ~~ 206 (309)
..
T Consensus 550 QH 551 (592)
T 4a9v_A 550 QH 551 (592)
T ss_dssp ES
T ss_pred eC
Confidence 43
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.69 E-value=52 Score=28.22 Aligned_cols=58 Identities=12% Similarity=0.308 Sum_probs=36.7
Q ss_pred eEEEEEecCCCcEEEEEcCC------------CeEEEEEcCCCCcceEEEeec-cCCceeEEEeccCCCCeEEEE
Q 021657 94 VEDVTFCPSSAQEFCSVGDD------------SCLILWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 94 v~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~ 155 (309)
.--|+|+|.| .+++.-..+ ..+.+.+..+++ ....+.. ...+++.++|+| +++.|++.
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~--~~rf~~~P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGE--IRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC--EEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCe--EEEEEeCCCCccCcCeeECC-CCCEEEEE
Confidence 4568899998 555544322 235555666666 4444433 346899999999 77766654
No 362
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=60.58 E-value=90 Score=27.59 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=38.3
Q ss_pred CCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeecc-------CCceeEEEeccCCCCeEEEEc
Q 021657 92 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH-------DADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 92 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~ 156 (309)
+.|..|+++|.++..+..+...+.|...+= .++ .-..+..+ ...|.+|+++|.+.+.++++.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~--tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDP-STE--TWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEET-TTT--EEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCC-CCC--CEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 379999999986566777776676666542 232 12222211 235889999985555555544
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.71 E-value=12 Score=35.14 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=29.5
Q ss_pred ceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec
Q 021657 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182 (309)
Q Consensus 138 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 182 (309)
.+.+++..+ +..++++-+.|+++|+|++.+ ++++.+..
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t------~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLST------NQCVETIE 276 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTT------TEEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCC------CCeEEeec
Confidence 345555666 778999999999999999998 66666543
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=53.73 E-value=20 Score=31.43 Aligned_cols=36 Identities=8% Similarity=0.335 Sum_probs=27.0
Q ss_pred ceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCCCCCCceeeec
Q 021657 138 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE 182 (309)
Q Consensus 138 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 182 (309)
.|.++.+ +..++++-+.|.++|+|++++ ++++....
T Consensus 223 ~Is~~~~---~~~fLftL~~Dh~LRiWsL~t------~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF---HERYLIVLTQNCHLKIWDLTS------FTLIQDYD 258 (729)
T ss_dssp EEEEEEE---TTTEEEEEETTCEEEEEETTT------TEEEEEEE
T ss_pred eEEEecc---CCcEEEEEEcCCeEEEEEcCC------CceEEeec
Confidence 3555444 467999999999999999999 66555543
No 365
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=51.64 E-value=1.3e+02 Score=26.83 Aligned_cols=28 Identities=7% Similarity=0.135 Sum_probs=19.4
Q ss_pred cceEEEEECCC-CCEEEEecCCCcEEEEe
Q 021657 10 NAEFALAMCPT-EPYVLSGGKDKSVVLWS 37 (309)
Q Consensus 10 ~~V~~~~~~~~-~~~l~t~~~dg~i~vwd 37 (309)
+.|.+|+++|. ...+..++..+.|...+
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~ 43 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD 43 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec
Confidence 37899999995 45566677667664443
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=50.90 E-value=78 Score=23.91 Aligned_cols=179 Identities=16% Similarity=0.140 Sum_probs=86.2
Q ss_pred ceEEEEECCCCCEEEEecCCCcEEEEeCCcccccccc----CCccccccCCCCceeecCCCCCCCCcccCCCCCcCcccc
Q 021657 11 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT----DPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGI 86 (309)
Q Consensus 11 ~V~~~~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (309)
.|..++-..+...++ . ||.|..|-....-..-.. .............. .+ . ++.++.|.......+-.
T Consensus 64 ~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~-al---~-~G~v~~wG~n~~gqlg~ 135 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASY-AL---K-DGKVIAWGDDSDGQTTV 135 (282)
T ss_dssp CCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEE-EE---E-TTEEEEEECCTTSTTSC
T ss_pred CEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEE-EE---e-CCeEEEecCCCCCcCCC
Confidence 456677665554444 3 788888876543111000 00000000111111 11 2 44555554433222211
Q ss_pred cccccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEec
Q 021657 87 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 166 (309)
Q Consensus 87 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 166 (309)
.......|..++..... .++. . ||.|..|-.....+.- ....-...|..++.-. ...++. .||.++.|-.
T Consensus 136 ~~~~~~~i~~i~~G~~~--~~~l-~-~G~v~~wG~n~~gqlg--~p~~~~~~v~~i~~G~--~hs~al--~~G~v~~wG~ 205 (282)
T 3qhy_B 136 PAEAQSGVTALDGGVYT--ALAV-K-NGGVIAWGDNYFGQTT--VPAEAQSGVDDVAGGI--FHSLAL--KDGKVIAWGD 205 (282)
T ss_dssp CGGGGSSEEEEEECSSE--EEEE-E-TTEEEEEECCTTSTTS--CCGGGGSSEEEEEECS--SEEEEE--ETTEEEEEEC
T ss_pred CccCCCCeEEEEcccCE--EEEE-E-CCEEEEecCCCCCCCC--CceecCCCeEEEEecC--CEEEEE--ECCeEEEEEC
Confidence 12233567777765433 3333 3 7999999765432111 1111234577776543 333444 5999999976
Q ss_pred CCCCCCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 167 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
....+. +.+. . ....|..|+...... ++.. ||.++.|=...
T Consensus 206 n~~gql--g~p~---~-~~~~v~~i~~G~~h~--~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 206 NRYKQT--TVPT---E-ALSGVSAIASGEWYS--LALK--NGKVIAWGSSR 246 (282)
T ss_dssp CTTSTT--CCCG---G-GGSSCCEEEECSSCE--EEEE--TTEEEEESTTC
T ss_pred CCCCCC--CCCc---c-cCCCceEEEcCCCEE--EEEE--CCEEEEecCCC
Confidence 653211 1111 1 123567777655443 3333 89999998766
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=48.24 E-value=1e+02 Score=24.63 Aligned_cols=153 Identities=8% Similarity=0.084 Sum_probs=79.2
Q ss_pred cCCeEEEEEe---cC----CCcEEEEEcCCCeEEEEEcCCCCcceEEEee--------------cc----CCceeEEEec
Q 021657 91 EDTVEDVTFC---PS----SAQEFCSVGDDSCLILWDARVGTSPVIKVEK--------------AH----DADLHCVDWN 145 (309)
Q Consensus 91 ~~~v~~~~~~---~~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~----~~~v~~~~~~ 145 (309)
...+..+.+. |. +....++=...+.|.++|+.+++. .+... +. ...+..|+++
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~s--wRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLs 228 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDS--WNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLG 228 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEE--EEEECGGGSCCSCEEEEETTEEEEECCCEEEEEEC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcE--EEEccCCCccccCcceEECCEEeEeccCceEEEec
Confidence 3467788887 22 213344444577899999988762 22210 10 2467888888
Q ss_pred cCC----CCeEEEEcCCC-cEEEEe---cCCCCCCCCCCceeeeccC--CCCeeEEEEe-cCCCcEEEEecCCCcEEEEe
Q 021657 146 PLD----DNLILTGSADN-SVRMFD---RRNLTSNGVGSPINKFEGH--SAAVLCVQWS-PDKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 146 ~~~----~~~l~~~~~dg-~i~i~d---~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~-~~~~~l~~~~~~dg~i~iwd 214 (309)
| + ++.|.-....+ .++-.. +++.. ....++.+... ...-..+++. .+|. |+.+--..+.|..|+
T Consensus 229 p-~~~~~~~~LYf~plss~~ly~V~T~~L~~~~---~~~~v~~~G~kg~~s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~ 303 (381)
T 3q6k_A 229 D-RDSEGNRPAYYLAGSAIKVYSVNTKELKQKG---GKLNPELLGNRGKYNDAIALAYDPKTKV-IFFAEANTKQVSCWN 303 (381)
T ss_dssp C-CCTTSCCEEEEEESSCSEEEEEEHHHHSSTT---CCCCCEEEEECCTTCCEEEEEECTTTCE-EEEEESSSSEEEEEE
T ss_pred C-CcCCCCeEEEEEECCCCcEEEEEHHHhhCcc---hhhceEEeeecCCCCCcceEEEeCCCCe-EEEEeccCCeEEEEe
Confidence 8 5 55555554444 333332 22211 02222222211 1233456675 4565 677778889999999
Q ss_pred CCc-ccccccCCCCCcCCCCceeeeecCCCcceeeEEEccCCCeEEE
Q 021657 215 YEK-VGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWTVV 260 (309)
Q Consensus 215 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 260 (309)
... .-.... ...+.. ...-....++.+.+++...+.
T Consensus 304 ~~~~~~~~~n---------~~~l~~-d~~l~~pd~~~i~~~g~Lwv~ 340 (381)
T 3q6k_A 304 TQKMPLRMKN---------TDVVYT-SSRFVFGTDISVDSKGGLWFM 340 (381)
T ss_dssp TTSCSBCGGG---------EEEEEE-CTTCCSEEEEEECTTSCEEEE
T ss_pred CCCCccccCc---------eEEEEE-CCCccccCeEEECCCCeEEEE
Confidence 864 110000 112222 223346778888776654343
No 368
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=45.51 E-value=1.6e+02 Score=26.01 Aligned_cols=27 Identities=11% Similarity=0.129 Sum_probs=17.9
Q ss_pred ceEEEEECCCC-CEEEEecCCCcEEEEe
Q 021657 11 AEFALAMCPTE-PYVLSGGKDKSVVLWS 37 (309)
Q Consensus 11 ~V~~~~~~~~~-~~l~t~~~dg~i~vwd 37 (309)
.|..|+++|.. ..+..+...+.|..++
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~ 51 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD 51 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC
Confidence 68899999963 4555666566654443
No 369
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=45.43 E-value=1.6e+02 Score=25.96 Aligned_cols=105 Identities=9% Similarity=0.155 Sum_probs=59.9
Q ss_pred CeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEEEecCCCCCC
Q 021657 93 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSN 172 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 172 (309)
.|.++...+++ ..|..|.. +-+..+|..+++ ...........|.++...+ ++.+.+ |+.+ -+.+++..+
T Consensus 192 ~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~~~--~~~~~~l~~~~i~~i~~d~-~g~lWi-gT~~-Gl~~~~~~~---- 260 (758)
T 3ott_A 192 FVNSLLEDTTR-QCVWIGTE-GYLFQYFPSTGQ--IKQTEAFHNNSIKSLALDG-NGDLLA-GTDN-GLYVYHNDT---- 260 (758)
T ss_dssp CEEEEEEETTT-TEEEEEEE-EEEEEEETTTTE--EEEEEEEEEEEEEEEEECT-TCCEEE-EETT-EEEEECCTT----
T ss_pred eeEEEEEECCC-CEEEEEEC-CCCeEEcCCCCe--EEeccCCCCCeEEEEEEcC-CCCEEE-EeCC-ceeEEecCC----
Confidence 47888777765 33344443 458888876654 2211111234588888876 555444 4444 477888765
Q ss_pred CCCCceeeec--------cCCCCeeEEEEecCCCcEEEEecCCCcEEEEe
Q 021657 173 GVGSPINKFE--------GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 214 (309)
Q Consensus 173 ~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd 214 (309)
... ..+. -....|.++....+|. | ..|+..| +.++.
T Consensus 261 --~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~-l-WiGT~~G-l~~~~ 304 (758)
T 3ott_A 261 --TPL-QHIIHDSRNIQSLTNNIIWNIFADQEHN-I-WLGTDYG-ISLSR 304 (758)
T ss_dssp --SCC-EEECCCTTCTTSCSCSCEEEEEECTTCC-E-EEEESSS-EEEEC
T ss_pred --CcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCC-E-EEEeCCc-ccccc
Confidence 222 2221 1234588888888887 3 4566566 54443
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=43.70 E-value=1.6e+02 Score=25.32 Aligned_cols=59 Identities=14% Similarity=0.364 Sum_probs=37.9
Q ss_pred CeEEEEEecCCCcEEE-EEcC-----------CCeEEEEEcCCCCcceEEEeec-cCCceeEEEeccCCCCeEEEE
Q 021657 93 TVEDVTFCPSSAQEFC-SVGD-----------DSCLILWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTG 155 (309)
Q Consensus 93 ~v~~~~~~~~~~~~l~-s~~~-----------dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~ 155 (309)
....|.|.++| .+.+ +=.. ...|..++..+++ ....+.. ....++.++|+| +++.|++.
T Consensus 477 sPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe--l~~fl~~P~~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGE--IRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC--EEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCe--EEEEEeCCCCccccCCEECC-CCCEEEEE
Confidence 46789999998 5554 3211 1256666766666 4444433 245789999999 77776665
No 371
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=29.37 E-value=2.6e+02 Score=24.03 Aligned_cols=58 Identities=7% Similarity=-0.020 Sum_probs=37.1
Q ss_pred cEEEEEcCCCeEEEEEcCC-CC---cceEEEee--ccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 105 QEFCSVGDDSCLILWDARV-GT---SPVIKVEK--AHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 105 ~~l~s~~~dg~i~iwd~~~-~~---~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
..+..|..+|.|.-.-+.. .. ......+. ....+|..|.+++ +...|.+++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~-~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDA-ERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEET-TTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcC-CCCEEEEEecceEEEc
Confidence 4677888999876443322 21 11112221 2456899999999 8888988888876665
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=28.54 E-value=2.1e+02 Score=22.26 Aligned_cols=123 Identities=13% Similarity=0.061 Sum_probs=71.7
Q ss_pred cCCeEEEEEecC--CCcEEEEEcCCCeEEEEEcCCCCcc-----eEEEeeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 91 EDTVEDVTFCPS--SAQEFCSVGDDSCLILWDARVGTSP-----VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 91 ~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
...|..+...++ ....++..+.+|.++--.+...... ....+.. .+.+..+.... ....++..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEEEEEECCCeEEE
Confidence 345655544332 2368899999999999887543211 1112223 34455554444 4566777788898887
Q ss_pred EecC--CCC---CCCCCCceeeeccCCCCeeEEEEecCCCcEEEEecCCCcEEEEeCCc
Q 021657 164 FDRR--NLT---SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 217 (309)
Q Consensus 164 ~d~~--~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~dg~i~iwd~~~ 217 (309)
+... ... ....+.....+.. ...|.++...+++.+++ ..+..|.++.-.+..
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll-~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVVREGTYLL-VATSGGYAKRTAIEE 228 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEECCTTCEEE-EEETTSEEEEEEGGG
T ss_pred EECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEECCCCEEE-EEeCCCcEEEEEHHH
Confidence 7766 311 1111333334432 34566666665566554 778899998887765
No 373
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.97 E-value=2.7e+02 Score=23.26 Aligned_cols=62 Identities=6% Similarity=0.159 Sum_probs=34.9
Q ss_pred CeEEEEcCCCcEEEEecCCCCCC-C-CCCceeeecc--CCCCeeEEEEecCCCcEEEEecCCCcEEE
Q 021657 150 NLILTGSADNSVRMFDRRNLTSN-G-VGSPINKFEG--HSAAVLCVQWSPDKSSVFGSSAEDGLLNI 212 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~-~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~dg~i~i 212 (309)
..++.|+.+|.|.=.-+...... . ....+.++.. ...+|..|.++++..+|+ .++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Ly-v~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLY-IGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEE-EEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEE-EEECCeEEEE
Confidence 36778888998754333211000 0 0112333332 357899999999999866 6676665544
No 374
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.54 E-value=2.7e+02 Score=23.27 Aligned_cols=70 Identities=6% Similarity=0.060 Sum_probs=42.6
Q ss_pred CeEEEEEecC----C-CcEEEEEcCCCeEEEEEcC-CCC-----cceEEEee--ccCCceeEEEeccCCCCeEEEEcCCC
Q 021657 93 TVEDVTFCPS----S-AQEFCSVGDDSCLILWDAR-VGT-----SPVIKVEK--AHDADLHCVDWNPLDDNLILTGSADN 159 (309)
Q Consensus 93 ~v~~~~~~~~----~-~~~l~s~~~dg~i~iwd~~-~~~-----~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg 159 (309)
..+.|+...- + -..+..|..+|.|.-.-+. ... ......+. ....+|..|.+++ ....|.+++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-TTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-CCCEEEEEECCe
Confidence 4677766532 2 1457788899987544332 211 11122222 2357899999999 889999998887
Q ss_pred cEEE
Q 021657 160 SVRM 163 (309)
Q Consensus 160 ~i~i 163 (309)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 375
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=26.43 E-value=2.5e+02 Score=22.48 Aligned_cols=146 Identities=7% Similarity=0.173 Sum_probs=76.0
Q ss_pred eEEEEEcCCC--CcceEEEeec------cCCceeEEEec---cC--C-CCeEEEE-cCCCcEEEEecCCCCCCCCCCcee
Q 021657 115 CLILWDARVG--TSPVIKVEKA------HDADLHCVDWN---PL--D-DNLILTG-SADNSVRMFDRRNLTSNGVGSPIN 179 (309)
Q Consensus 115 ~i~iwd~~~~--~~~~~~~~~~------~~~~v~~~~~~---~~--~-~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~ 179 (309)
.|.+||+.+. + .++.+.- ....+..+.+. |. . ..+.... +..+-|.++|+.+ ++..+
T Consensus 124 kLv~~DL~t~~~~--li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~------~~swR 195 (381)
T 3q6k_A 124 AIVAYDLKQPNYP--EVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKK------QDSWN 195 (381)
T ss_dssp EEEEEESSSTTCC--EEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTT------TEEEE
T ss_pred eEEEEECCCCCce--eEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCC------CcEEE
Confidence 6889999998 6 4433321 13457778877 21 1 2333333 3467899999987 33222
Q ss_pred eec--------------cC----CCCeeEEEEecC----CCcEEEEecCCCcEEEEeCCcccccccCCCCCcCCCCceee
Q 021657 180 KFE--------------GH----SAAVLCVQWSPD----KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 237 (309)
Q Consensus 180 ~~~--------------~~----~~~v~~~~~~~~----~~~l~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
.+. +. ...+..|+++|+ ++.|+...-... ++|.+.+. ....... ....+.+.
T Consensus 196 v~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~--~ly~V~T~-~L~~~~~---~~~v~~~G 269 (381)
T 3q6k_A 196 VTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI--KVYSVNTK-ELKQKGG---KLNPELLG 269 (381)
T ss_dssp EECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS--EEEEEEHH-HHSSTTC---CCCCEEEE
T ss_pred EccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC--cEEEEEHH-HhhCcch---hhceEEee
Confidence 221 10 246888999998 777765555433 35555431 1100000 00011111
Q ss_pred eecCCCcceeeEEEccCCCeEEEEecCCCCCCCCCCeEEEEEccc
Q 021657 238 QHAGHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSD 282 (309)
Q Consensus 238 ~~~~~~~~v~~~~~~~~~~~~~~s~s~d~~s~~~dg~v~vw~~~~ 282 (309)
. .+....-..+++.+....++.+--.. +.|..|+...
T Consensus 270 ~-kg~~s~~~~~~~D~~~G~ly~~~~~~-------~aI~~w~~~~ 306 (381)
T 3q6k_A 270 N-RGKYNDAIALAYDPKTKVIFFAEANT-------KQVSCWNTQK 306 (381)
T ss_dssp E-CCTTCCEEEEEECTTTCEEEEEESSS-------SEEEEEETTS
T ss_pred e-cCCCCCcceEEEeCCCCeEEEEeccC-------CeEEEEeCCC
Confidence 1 11112334566764445566555444 7899999873
No 376
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=25.99 E-value=2.7e+02 Score=24.38 Aligned_cols=58 Identities=7% Similarity=0.091 Sum_probs=36.7
Q ss_pred cEEEEEcCCCeEE-EEEcCCCCc-----ceEEE--eeccCCceeEEEeccCCCCeEEEEcCCCcEEE
Q 021657 105 QEFCSVGDDSCLI-LWDARVGTS-----PVIKV--EKAHDADLHCVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 105 ~~l~s~~~dg~i~-iwd~~~~~~-----~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
..+..|..+|.|. +........ ..+.. ......+|..|.+++ +...|.+++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~-~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEET-TTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcC-CCCEEEEEECCEEEEE
Confidence 3577888999875 333222210 01111 123567899999999 8899999998886665
No 377
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=24.76 E-value=3.3e+02 Score=23.34 Aligned_cols=26 Identities=12% Similarity=-0.008 Sum_probs=18.3
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCe
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSC 115 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~ 115 (309)
|-..+.-..|.-||...++....+|+
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt 202 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGT 202 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTC
T ss_pred ccCceeEEEcCCCCcceEEEEccCCc
Confidence 44456667777888777888777665
No 378
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=23.38 E-value=55 Score=22.94 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=28.0
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCC
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 125 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 125 (309)
+...+.++.|...+.+-+++...+|++.++|.+-++
T Consensus 117 g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 117 GRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp TCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CCceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 455677778876655668888889999999998776
No 379
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=21.68 E-value=3.9e+02 Score=23.01 Aligned_cols=62 Identities=6% Similarity=0.160 Sum_probs=35.0
Q ss_pred CeEEEEcCCCcEEEEecCCCCCCCCCCceeeec--cCCCCeeEEEEecCCCcEEEEecCCCcEEE
Q 021657 150 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFE--GHSAAVLCVQWSPDKSSVFGSSAEDGLLNI 212 (309)
Q Consensus 150 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~dg~i~i 212 (309)
..++.|+.+|.|.-.-..........-.+..+. ....+|..|.++++..+|+ .++.++.++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~Ly-V~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLY-VSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEE-EECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEE-EEecceEEEc
Confidence 467788889987643332211000011122232 2456789999999988766 6665655544
No 380
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=21.54 E-value=84 Score=23.59 Aligned_cols=28 Identities=7% Similarity=0.273 Sum_probs=22.4
Q ss_pred ccCCCeEEEEecCCCCCCCCCC-eEEEEEcc
Q 021657 252 NASDPWTVVSVSDDCDSTGGGG-TLQIWRMS 281 (309)
Q Consensus 252 ~~~~~~~~~s~s~d~~s~~~dg-~v~vw~~~ 281 (309)
.|.+++++++++.. +.+.+| .|.++-.+
T Consensus 43 ~~~~q~~i~~g~~~--t~~~~~a~i~~~g~~ 71 (275)
T 3gw6_A 43 NPAGQRIIFCGGEG--TSSTTGAQITLYGAN 71 (275)
T ss_dssp CGGGCEEEEESSSS--SSTTSBCEEEEEBSS
T ss_pred CCCccEEEEecCCC--CCCCCccEEEEecCC
Confidence 36688999998888 888888 77777766
No 381
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=20.85 E-value=4.4e+02 Score=23.38 Aligned_cols=64 Identities=6% Similarity=0.060 Sum_probs=39.0
Q ss_pred ccCCeEEEEEecCCCcEEEEEcCCCeEEEEEcCCCCcceEEEeec------------cCCceeEEEeccCCCCeEEEEc
Q 021657 90 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA------------HDADLHCVDWNPLDDNLILTGS 156 (309)
Q Consensus 90 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~l~~~~ 156 (309)
-.+.|.+|.++|.++..+..+...|.|...+ ..++ .-..... ....+.+++++|.+.+.++++.
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~--tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKW--EWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTT--EEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCC--CeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 4568999999998877777777666654443 2232 1111111 2245899999985555555443
No 382
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.70 E-value=4.3e+02 Score=23.13 Aligned_cols=69 Identities=9% Similarity=0.066 Sum_probs=42.3
Q ss_pred CeEEEEEe----cCCC--cEEEEEcCCCeEEEE-EcCCCCcceEEEe--eccCCceeEEEeccCCC--CeEEEEcCCCcE
Q 021657 93 TVEDVTFC----PSSA--QEFCSVGDDSCLILW-DARVGTSPVIKVE--KAHDADLHCVDWNPLDD--NLILTGSADNSV 161 (309)
Q Consensus 93 ~v~~~~~~----~~~~--~~l~s~~~dg~i~iw-d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~--~~l~~~~~dg~i 161 (309)
..+.|+.. .++. ..++.|..+|.|.-. ...... ...... .....+|..|.+++ .. ..|.+++.++.+
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~-~~~ee~~~~~~~~pI~~l~l~~-~~~~~~Lyv~s~~~V~ 475 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAV-HIIEETQLFQDFEPVQTLLLSS-KKGNRFVYAGSNSGVV 475 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSE-EEEEEEECCTTCCCCCEEEECC-SSSSCEEEEECSSCEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCc-eEEEEecccCCCCcceeeEecc-CCCccEEEEEEcCeEE
Confidence 45667653 2332 467788999987543 333222 122222 22356899999998 66 888888877766
Q ss_pred EE
Q 021657 162 RM 163 (309)
Q Consensus 162 ~i 163 (309)
++
T Consensus 476 ~v 477 (663)
T 1olz_A 476 QA 477 (663)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 383
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.43 E-value=2.7e+02 Score=23.60 Aligned_cols=71 Identities=8% Similarity=-0.043 Sum_probs=43.6
Q ss_pred CCeEEEEEecCC-CcEEEEEcCCCeEEEEEcCCCCc--ceEEEe--eccCCcee-EEEeccCCCCeEEEEcCCCcEEE
Q 021657 92 DTVEDVTFCPSS-AQEFCSVGDDSCLILWDARVGTS--PVIKVE--KAHDADLH-CVDWNPLDDNLILTGSADNSVRM 163 (309)
Q Consensus 92 ~~v~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~--~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~i 163 (309)
...+.|+....+ -..+..|..+|.|.-..+..... .....+ .....+|. .|.+++ +...|.+++.++.++|
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~-~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSI-NQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECT-TSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEcc-CCCeEEEEecccccee
Confidence 356667665432 24577888999887555543221 112222 22246785 899999 8888998887765554
Done!