BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021659
(309 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 30/296 (10%)
Query: 27 IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA--FYR 82
++RFS +++++A+D F I+ G YK R DG + VK ++ + F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 83 EIXXXXXXXXXXXXXXXXFS-TGRKRLLVFDNIENGSLKEHLNDPLKT--PLDWKTRLQI 139
E+ F T +RLLV+ + NGS+ L + ++ PLDW R +I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 140 AIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN-----------SVR 188
A+G A L YL + + + +LDE F A + D G +VR
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 189 NYATMPHSSCPEDCSTQDCSNI--IFQLGVLILELVTGQSP-------EEGDVDLIQWIQ 239
T+ H + PE ST S +F GV++LEL+TGQ + DV L+ W++
Sbjct: 205 --GTIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 240 EXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
++D DL G+Y +E+++L+ VA LC ++ + ++ R L+ +
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 134/296 (45%), Gaps = 30/296 (10%)
Query: 27 IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA--FYR 82
++RFS +++++A+D F I+ G YK R DG + VK ++ + F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 83 EIXXXXXXXXXXXXXXXXFS-TGRKRLLVFDNIENGSLKEHLNDPLKT--PLDWKTRLQI 139
E+ F T +RLLV+ + NGS+ L + ++ PLDW R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 140 AIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN-----------SVR 188
A+G A L YL + + + +LDE F A + D G +VR
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 189 NYATMPHSSCPEDCSTQDCSNI--IFQLGVLILELVTGQSP-------EEGDVDLIQWIQ 239
+ H + PE ST S +F GV++LEL+TGQ + DV L+ W++
Sbjct: 197 --GXIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 240 EXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
++D DL G+Y +E+++L+ VA LC ++ + ++ R L+ +
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 108 LLVFDNIENGSLKEHL--NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXX 165
+L++ +ENG+LK HL +D + W+ RL+I IG A L YL + +
Sbjct: 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKS 167
Query: 166 XXXMLDENFTAKLSDVGFFNSVRNYATMPHSSC---------PE---DCSTQDCSNIIFQ 213
+LDENF K++D G PE + S+ ++
Sbjct: 168 INILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD-VYS 226
Query: 214 LGVLILELVTGQS------PEEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKL 267
GV++ E++ +S P E V+L +W E +++DP+L + L+K
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREM-VNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 268 --LAVARLCIKTKDKPTIS 284
AV L + ++D+P++
Sbjct: 286 GDTAVKCLALSSEDRPSMG 304
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 108 LLVFDNIENGSLKEHL--NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXX 165
+L++ +ENG+LK HL +D + W+ RL+I IG A L YL + +
Sbjct: 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKS 167
Query: 166 XXXMLDENFTAKLSDVGFFNSVRNY----------ATMPHSSCPE---DCSTQDCSNIIF 212
+LDENF K++D G T+ + PE + S+ ++
Sbjct: 168 INILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID-PEYFIKGRLTEKSD-VY 225
Query: 213 QLGVLILELVTGQS------PEEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKK 266
GV++ E++ +S P E V+L +W E +++DP+L + L+K
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREM-VNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK 284
Query: 267 L--LAVARLCIKTKDKPTIS 284
AV L + ++D+P++
Sbjct: 285 FGDTAVKCLALSSEDRPSMG 304
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 110/286 (38%), Gaps = 33/286 (11%)
Query: 28 RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE----KDAFYRE 83
R S KM GF G YK + VA+ K +++ K F +E
Sbjct: 30 RPISVGGNKMGEGGF---------GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQE 80
Query: 84 IXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKTRLQIAI 141
I FS+ G LV+ + NGSL + L+ TP L W R +IA
Sbjct: 81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 142 GVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPHSS---- 197
G A + +L ++ + +LDE FTAK+SD G + +A S
Sbjct: 141 GAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 198 -----CPEDCSTQ-DCSNIIFQLGVLILELVTG----QSPEEGDVDLIQWIQEXXXXXXX 247
PE + + I+ GV++LE++TG E + L +
Sbjct: 198 TTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTI 257
Query: 248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
ID + + DS ++ + +VA C+ K I ++ + LQ
Sbjct: 258 EDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 109/290 (37%), Gaps = 41/290 (14%)
Query: 28 RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE----KDAFYRE 83
R S KM GF G YK + VA+ K +++ K F +E
Sbjct: 24 RPISVGGNKMGEGGF---------GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQE 74
Query: 84 IXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKTRLQIAI 141
I FS+ G LV+ + NGSL + L+ TP L W R +IA
Sbjct: 75 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 134
Query: 142 GVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYA---------- 191
G A + +L ++ + +LDE FTAK+SD G + +A
Sbjct: 135 GAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 192 ----TMPHSSCPEDCSTQDCSNIIFQLGVLILELVTG----QSPEEGDVDLIQWIQEXXX 243
P + E D I+ GV++LE++TG E + L +
Sbjct: 192 TTAYMAPEALRGEITPKSD----IYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 247
Query: 244 XXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
ID + + DS ++ + +VA C+ K I ++ + LQ
Sbjct: 248 EKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 109/290 (37%), Gaps = 41/290 (14%)
Query: 28 RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE----KDAFYRE 83
R S KM GF G YK + VA+ K +++ K F +E
Sbjct: 30 RPISVGGNKMGEGGF---------GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQE 80
Query: 84 IXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKTRLQIAI 141
I FS+ G LV+ + NGSL + L+ TP L W R +IA
Sbjct: 81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 142 GVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATM-------- 193
G A + +L ++ + +LDE FTAK+SD G + +A
Sbjct: 141 GAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 194 ------PHSSCPEDCSTQDCSNIIFQLGVLILELVTG----QSPEEGDVDLIQWIQEXXX 243
P + E D I+ GV++LE++TG E + L +
Sbjct: 198 TTAYMAPEALRGEITPKSD----IYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 244 XXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
ID + + DS ++ + +VA C+ K I ++ + LQ
Sbjct: 254 EKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 30 FSYKDIKMATDGF-HRIVYTNSH-------GAAYKARFQDGEVALVKEIQALNLE----K 77
FS+ ++K T+ F R + + G YK + VA+ K +++ K
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 78 DAFYREIXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKT 135
F +EI FS+ G LV+ NGSL + L+ TP L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPH 195
R +IA G A + +L ++ + +LDE FTAK+SD G + +A
Sbjct: 126 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 196 SS---------CPEDCSTQ-DCSNIIFQLGVLILELVTG 224
S PE + + I+ GV++LE++TG
Sbjct: 183 XSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 39/250 (15%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 23 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 82
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRL----QIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
+ +ENGSL + L P L L QIA G+A E + NL
Sbjct: 83 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNL-------RAAN 135
Query: 168 XMLDENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVL 217
++ + + K++D G + R A P + PE + T + ++ G+L
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 218 ILELVT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLC 274
+ E+VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC
Sbjct: 196 LTEIVTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLC 242
Query: 275 IKTK--DKPT 282
K + D+PT
Sbjct: 243 WKERPEDRPT 252
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 81
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 82 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 138
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 198
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 199 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 245
Query: 279 --DKPT 282
D+PT
Sbjct: 246 PEDRPT 251
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 143
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 250
Query: 279 --DKPT 282
D+PT
Sbjct: 251 PEDRPT 256
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 143
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 250
Query: 279 --DKPT 282
D+PT
Sbjct: 251 PEDRPT 256
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 87
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 88 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 144
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 145 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 205 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 251
Query: 279 --DKPT 282
D+PT
Sbjct: 252 PEDRPT 257
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 143
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 144 DTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 250
Query: 279 --DKPT 282
D+PT
Sbjct: 251 PEDRPT 256
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 88
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 89 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 145
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 146 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 206 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 252
Query: 279 --DKPT 282
D+PT
Sbjct: 253 PEDRPT 258
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 92
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 149
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 256
Query: 279 --DKPT 282
D+PT
Sbjct: 257 PEDRPT 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 143
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 250
Query: 279 --DKPT 282
D+PT
Sbjct: 251 PEDRPT 256
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 37 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 96
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + + + ++
Sbjct: 97 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVS 153
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 214 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 260
Query: 279 --DKPT 282
D+PT
Sbjct: 261 PEDRPT 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 91
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 92 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 148
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 209 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 255
Query: 279 --DKPT 282
D+PT
Sbjct: 256 PEDRPT 261
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 36 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 95
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 96 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 152
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 213 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 259
Query: 279 --DKPT 282
D+PT
Sbjct: 260 PEDRPT 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 35 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 94
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 95 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 151
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 152 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 212 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 258
Query: 279 --DKPT 282
D+PT
Sbjct: 259 PEDRPT 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 31/246 (12%)
Query: 52 GAAYKARFQDGEVALVKEIQALNLEKDAFYREIXXXXXXXXXXXXXXXXFSTGRKRLLVF 111
G + + VK ++ ++ DAF E T ++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 92
Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLD 171
+ +ENGSL + L P L L +A +A + ++ + ++
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVS 149
Query: 172 ENFTAKLSDVGFFN-------SVRNYATMP-HSSCPE--DCSTQDCSNIIFQLGVLILEL 221
+ + K++D G + R A P + PE + T + ++ G+L+ E+
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 222 VT-GQSPEEG--DVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
VT G+ P G + ++IQ ++ +RM+ PD +EL +L+ RLC K +
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLER------GYRMVRPD----NCPEELYQLM---RLCWKER 256
Query: 279 --DKPT 282
D+PT
Sbjct: 257 PEDRPT 262
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFT 175
+G L + + P + P K + + VA +EYL + + MLDE+FT
Sbjct: 107 HGDLLQFIRSPQRNP-TVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFT 162
Query: 176 AKLSDVGFFNSV--RNYATMP---HSSCPEDCSTQDCSNI--------IFQLGVLILELV 222
K++D G + R Y ++ H+ P + + ++ GVL+ EL+
Sbjct: 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
Query: 223 TGQSPEEGDVD 233
T +P +D
Sbjct: 223 TRGAPPYRHID 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA +++L ++ +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 163
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G F+SV N A +P E TQ + ++
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 224 GVLLWELMTRGAPPYPDVN 242
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA +++L ++ +
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 164
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G F+SV N A +P E TQ + ++
Sbjct: 165 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 225 GVLLWELMTRGAPPYPDVN 243
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA +++L ++ +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 163
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G F+SV N A +P E TQ + ++
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 224 GVLLWELMTRGAPPYPDVN 242
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA +++L ++ +
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 161
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G F+SV N A +P E TQ + ++
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 222 GVLLWELMTRGAPPYPDVN 240
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA +++L ++ +
Sbjct: 113 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 168
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G F+SV N A +P E TQ + ++
Sbjct: 169 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 228
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 229 GVLLWELMTRGAPPYPDVN 247
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA +++L ++ +
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 164
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G F+SV N A +P E TQ + ++
Sbjct: 165 CMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 225 GVLLWELMTRGAPPYPDVN 243
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 19/140 (13%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIG-VAAALEYLLLFSNLPMY 159
F T K L+ D I G L HL+ + + +QI +G + ALE+L L +
Sbjct: 128 FQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEIVLALEHL---HKLGII 181
Query: 160 YVXXXXXXXMLDENFTAKLSDVGFFNS-VRNYATMPHSSC-------PEDC----STQDC 207
Y +LD N L+D G V + + C P+ S D
Sbjct: 182 YRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDK 241
Query: 208 SNIIFQLGVLILELVTGQSP 227
+ + LGVL+ EL+TG SP
Sbjct: 242 AVDWWSLGVLMYELLTGASP 261
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA +++L ++ +
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARN 222
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G F+SV N A +P E TQ + ++
Sbjct: 223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 282
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 283 GVLLWELMTRGAPPYPDVN 301
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 158
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 219 GVLLWELMTRGAPPYPDVN 237
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
F T + V + + G L H+ K P +IAIG L + +
Sbjct: 90 FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG-------LFFLQSKGI 142
Query: 159 YYVXXXXXXXMLDENFTAKLSDVGFFN-------SVRNYATMPHSSCPEDCSTQDCSNII 211
Y MLD K++D G + + + P PE + Q +
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 212 --FQLGVLILELVTGQSPEEG--DVDLIQWIQE 240
+ GVL+ E++ GQ+P EG + +L Q I E
Sbjct: 203 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 162
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 223 GVLLWELMTRGAPPYPDVN 241
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 100 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 155
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 216 GVLLWELMTRGAPPYPDVN 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 160
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 221 GVLLWELMTRGAPPYPDVN 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLN-DPLKTPLDWKTRL-QIAIGVAAALEYLLLFSNLPM 158
F T K L+ D + G L L+ + + T D K L ++A+G L++L +L +
Sbjct: 99 FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALG----LDHL---HSLGI 151
Query: 159 YYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNII 211
Y +LDE KL+D G ++ +S C PE + Q S+
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSA 211
Query: 212 --FQLGVLILELVTGQSPEEG 230
+ GVL+ E++TG P +G
Sbjct: 212 DWWSYGVLMFEMLTGSLPFQG 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 161
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 222 GVLLWELMTRGAPPYPDVN 240
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 163
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 224 GVLLWELMTRGAPPYPDVN 242
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 163
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 224 GVLLWELMTRGAPPYPDVN 242
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 127 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 182
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 243 GVLLWELMTRGAPPYPDVN 261
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 126 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 181
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G + SV N A +P E TQ + ++
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 242 GVLLWELMTRGAPPYPDVN 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 19/134 (14%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
LVFD ++ G L ++L + K L K +I + A LE + L + +
Sbjct: 100 FLVFDLMKKGELFDYLTE--KVTLSEKETRKI---MRALLEVICALHKLNIVHRDLKPEN 154
Query: 168 XMLDENFTAKLSDVGFF------NSVRNYATMPHSSCPE--DCSTQDCSNI------IFQ 213
+LD++ KL+D GF +R+ P PE +CS D ++
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 214 LGVLILELVTGQSP 227
GV++ L+ G P
Sbjct: 215 TGVIMYTLLAGSPP 228
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
F T + V + + G L H+ K P +IAIG+ +++ +L +
Sbjct: 411 FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKL 470
Query: 159 YYVXXXXXXXMLDENFTAKLSDVGFFN-------SVRNYATMPHSSCPEDCSTQDCSNII 211
V MLD K++D G + + + P PE + Q +
Sbjct: 471 DNV-------MLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 523
Query: 212 --FQLGVLILELVTGQSPEEG--DVDLIQWIQE 240
+ GVL+ E++ GQ+P EG + +L Q I E
Sbjct: 524 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
LVFD ++ G L ++L + K L K +I + A LE + L + +
Sbjct: 87 FLVFDLMKKGELFDYLTE--KVTLSEKETRKI---MRALLEVICALHKLNIVHRDLKPEN 141
Query: 168 XMLDENFTAKLSDVGFF------NSVRNYATMPHSSCPE--DCSTQDCSNI------IFQ 213
+LD++ KL+D GF +R P PE +CS D ++
Sbjct: 142 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201
Query: 214 LGVLILELVTGQSP 227
GV++ L+ G P
Sbjct: 202 TGVIMYTLLAGSPP 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
LVFD ++ G L ++L + K L K +I + A LE + L + +
Sbjct: 100 FLVFDLMKKGELFDYLTE--KVTLSEKETRKI---MRALLEVICALHKLNIVHRDLKPEN 154
Query: 168 XMLDENFTAKLSDVGFF------NSVRNYATMPHSSCPE--DCSTQDCSNI------IFQ 213
+LD++ KL+D GF +R P PE +CS D ++
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 214 LGVLILELVTGQSP 227
GV++ L+ G P
Sbjct: 215 TGVIMYTLLAGSPP 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXXXX 167
L+V +++G L+ + + P K + + VA ++YL ++ +
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARN 162
Query: 168 XMLDENFTAKLSDVGF--------FNSVRNY--ATMPHSSCP-EDCSTQDCSNI--IFQL 214
MLDE FT K++D G SV N A +P E TQ + ++
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 215 GVLILELVTGQSPEEGDVD 233
GVL+ EL+T +P DV+
Sbjct: 223 GVLLWELMTRGAPPYPDVN 241
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
F T + V + + G L H+ K P +I+IG+ + +++ +L +
Sbjct: 89 FQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKL 148
Query: 159 YYVXXXXXXXMLDENFTAKLSDVGFFN-------SVRNYATMPHSSCPEDCSTQDCSNII 211
V MLD K++D G + R + P PE + Q +
Sbjct: 149 DNV-------MLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSV 201
Query: 212 --FQLGVLILELVTGQSPEEG--DVDLIQWIQE 240
+ GVL+ E++ GQ P +G + +L Q I E
Sbjct: 202 DWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
F T + V + + G L H+ K P + R A ++ AL YL + Y
Sbjct: 79 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYL---HERGIIY 133
Query: 161 VXXXXXXXMLDENFTAKLSDVGF-------FNSVRNYATMPHSSCPEDCSTQDCSNII-- 211
+LD KL+D G ++ + P+ PE +D +
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 212 FQLGVLILELVTGQSP 227
+ LGVL+ E++ G+SP
Sbjct: 194 WALGVLMFEMMAGRSP 209
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
F T + V + + G L H+ K P + R A ++ AL YL + Y
Sbjct: 122 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYL---HERGIIY 176
Query: 161 VXXXXXXXMLDENFTAKLSDVGF-------FNSVRNYATMPHSSCPEDCSTQDCSNII-- 211
+LD KL+D G ++ + P+ PE +D +
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 236
Query: 212 FQLGVLILELVTGQSP 227
+ LGVL+ E++ G+SP
Sbjct: 237 WALGVLMFEMMAGRSP 252
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
F T + V + + G L H+ K P + R A ++ AL YL + Y
Sbjct: 75 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYL---HERGIIY 129
Query: 161 VXXXXXXXMLDENFTAKLSDVGF-------FNSVRNYATMPHSSCPEDCSTQDCSNII-- 211
+LD KL+D G ++ + P+ PE +D +
Sbjct: 130 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 189
Query: 212 FQLGVLILELVTGQSP 227
+ LGVL+ E++ G+SP
Sbjct: 190 WALGVLMFEMMAGRSP 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
F T + V + + G L H+ K P + R A ++ AL YL + Y
Sbjct: 90 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYL---HERGIIY 144
Query: 161 VXXXXXXXMLDENFTAKLSDVGF-------FNSVRNYATMPHSSCPEDCSTQDCSNII-- 211
+LD KL+D G ++ + P+ PE +D +
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 204
Query: 212 FQLGVLILELVTGQSP 227
+ LGVL+ E++ G+SP
Sbjct: 205 WALGVLMFEMMAGRSP 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 16/140 (11%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLN-DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY 159
F T K L+ D + G L L+ + + T D K L +A AL++L +L +
Sbjct: 96 FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHL---HSLGII 149
Query: 160 YVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNII- 211
Y +LDE KL+D G ++ +S C PE + + +
Sbjct: 150 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSAD 209
Query: 212 -FQLGVLILELVTGQSPEEG 230
+ GVL+ E++TG P +G
Sbjct: 210 WWSFGVLMFEMLTGTLPFQG 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 16/140 (11%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLN-DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY 159
F T K L+ D + G L L+ + + T D K L +A AL++L +L +
Sbjct: 95 FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHL---HSLGII 148
Query: 160 YVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNII- 211
Y +LDE KL+D G ++ +S C PE + + +
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSAD 208
Query: 212 -FQLGVLILELVTGQSPEEG 230
+ GVL+ E++TG P +G
Sbjct: 209 WWSFGVLMFEMLTGTLPFQG 228
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 16/140 (11%)
Query: 101 FSTGRKRLLVFDNIENGSLKEHLN-DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY 159
F T K L+ D + G L L+ + + T D K L +A AL++L +L +
Sbjct: 95 FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHL---HSLGII 148
Query: 160 YVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNII- 211
Y +LDE KL+D G ++ +S C PE + + +
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSAD 208
Query: 212 -FQLGVLILELVTGQSPEEG 230
+ GVL+ E++TG P +G
Sbjct: 209 WWSFGVLMFEMLTGTLPFQG 228
>pdb|4F21|A Chain A, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|B Chain B, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|C Chain C, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|D Chain D, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|E Chain E, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|F Chain F, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|G Chain G, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|H Chain H, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
Length = 246
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 169 MLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNII 211
+L + + KL GF N ++Y M HS C E+ +D SN I
Sbjct: 200 VLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEI--KDISNFI 240
>pdb|2KY8|A Chain A, Solution Structure And Dynamic Analysis Of Chicken Mbd2
Methyl Binding Domain Bound To A Target Methylated Dna
Sequence
Length = 72
Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 284 SIPQISRYLQNEVDIQCYKY 303
S PQ++RYL N VD+ C+ +
Sbjct: 47 SKPQLARYLGNAVDLSCFDF 66
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 179 DXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I H +IDP+ + K L V + C+K K ISIP+
Sbjct: 239 FQQIINQI---------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 288 I 288
+
Sbjct: 290 L 290
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I H +IDP+ + K L V + C+K K ISIP+
Sbjct: 239 FQQIINQI---------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 288 I 288
+
Sbjct: 290 L 290
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 102 STGRKRLLVFDNIENGSLKEHL--NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY 159
+ GR ++V + +ENGSL L +D T + L+ GV A + YL S+L
Sbjct: 120 TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL---SDLGYV 173
Query: 160 YVXXXXXXXMLDENFTAKLSDVGFFNSVRN-----YATMPHS-----SCPEDCS--TQDC 207
+ ++D N K+SD G + + Y T + PE + T
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSS 233
Query: 208 SNIIFQLGVLILE-LVTGQSP 227
++ ++ GV++ E L G+ P
Sbjct: 234 ASDVWSFGVVMWEVLAYGERP 254
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I + H +IDP+ + K L V + C+K K ISIP+
Sbjct: 220 FQQIINQISKL---------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270
Query: 288 I 288
+
Sbjct: 271 L 271
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 159 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I H +IDP+ + K L V + C+K K ISIP+
Sbjct: 219 FQQIINQI---------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 269
Query: 288 I 288
+
Sbjct: 270 L 270
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 163 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I H +IDP+ + K L V + C+K K ISIP+
Sbjct: 223 FQQIINQI---------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 273
Query: 288 I 288
+
Sbjct: 274 L 274
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 102 STGRKRLLVFDNIENGSLKEHL--NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY 159
+ GR ++V + +ENGSL L +D T + L+ GV A + YL S+L
Sbjct: 120 TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL---SDLGYV 173
Query: 160 YVXXXXXXXMLDENFTAKLSDVGF 183
+ ++D N K+SD G
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGL 197
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I + H +IDP+ + K L V + C+K K ISIP+
Sbjct: 267 FQQIINQISKL---------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
Query: 288 I 288
+
Sbjct: 318 L 318
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I + H +IDP+ + K L V + C+K K ISIP+
Sbjct: 267 FQQIINQISKL---------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
Query: 288 I 288
+
Sbjct: 318 L 318
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 171 DENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI---IFQLGVLILELVTGQSP 227
D K S VG N + A SS E+ ++ + ++ LG ++ + G++P
Sbjct: 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 228 EEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ 287
+ ++ I + H +IDP+ + K L V + C+K K ISIP+
Sbjct: 267 FQQIINQISKL---------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
Query: 288 I 288
+
Sbjct: 318 L 318
>pdb|1W23|A Chain A, Crystal Structure Of Phosphoserine Aminotransferase From
Bacillus Alcalophilus
pdb|1W23|B Chain B, Crystal Structure Of Phosphoserine Aminotransferase From
Bacillus Alcalophilus
pdb|2BHX|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure A)
pdb|2BHX|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure A)
pdb|2BI1|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure B)
pdb|2BI1|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure B)
pdb|2BI2|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure C)
pdb|2BI2|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure C)
pdb|2BI3|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure D)
pdb|2BI3|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure D)
pdb|2BI5|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure E)
pdb|2BI5|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure E)
pdb|2BI9|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure F)
pdb|2BI9|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure F)
pdb|2BIA|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure G)
pdb|2BIA|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure G)
Length = 360
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 255 LGGSYDSKELK--KLLAVARLCIKTKDKPTISIPQISRYLQNEVD 297
L GS+ K LK KLL + TK SIP S + NE D
Sbjct: 98 LTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNEND 142
>pdb|2BIE|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure H)
pdb|2BIE|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure H)
pdb|2BIG|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure I)
pdb|2BIG|B Chain B, Radiation Damage Of The Schiff Base In Phosphoserine
Aminotransferase (Structure I)
Length = 361
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 255 LGGSYDSKELK--KLLAVARLCIKTKDKPTISIPQISRYLQNEVD 297
L GS+ K LK KLL + TK SIP S + NE D
Sbjct: 99 LTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNEND 143
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,748,795
Number of Sequences: 62578
Number of extensions: 272111
Number of successful extensions: 658
Number of sequences better than 100.0: 76
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 79
length of query: 309
length of database: 14,973,337
effective HSP length: 99
effective length of query: 210
effective length of database: 8,778,115
effective search space: 1843404150
effective search space used: 1843404150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)