Query 021660
Match_columns 309
No_of_seqs 194 out of 2430
Neff 10.4
Searched_HMMs 13730
Date Mon Mar 25 07:25:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021660.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021660hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sxjb2 c.37.1.20 (B:7-230) Re 100.0 2.3E-38 1.7E-42 256.8 24.7 222 40-263 2-223 (224)
2 d1sxjc2 c.37.1.20 (C:12-238) R 100.0 3.3E-37 2.4E-41 250.6 23.5 220 41-263 2-226 (227)
3 d1iqpa2 c.37.1.20 (A:2-232) Re 100.0 1.8E-36 1.3E-40 246.8 23.2 220 40-262 11-230 (231)
4 d1njfa_ c.37.1.20 (A:) delta p 100.0 7.5E-35 5.4E-39 237.9 26.0 216 43-263 2-238 (239)
5 d1sxjd2 c.37.1.20 (D:26-262) R 100.0 3.4E-34 2.5E-38 234.2 22.7 222 42-263 1-236 (237)
6 d1sxje2 c.37.1.20 (E:4-255) Re 100.0 3.2E-30 2.4E-34 212.3 21.6 208 43-250 1-241 (252)
7 d1sxja2 c.37.1.20 (A:295-547) 100.0 5.1E-30 3.7E-34 211.3 22.2 217 41-262 2-246 (253)
8 d1in4a2 c.37.1.20 (A:17-254) H 100.0 2.1E-27 1.5E-31 193.6 25.0 200 47-262 3-231 (238)
9 d1ixsb2 c.37.1.20 (B:4-242) Ho 100.0 6E-27 4.4E-31 191.0 24.9 201 47-262 3-232 (239)
10 d1a5ta2 c.37.1.20 (A:1-207) de 99.9 3.8E-26 2.8E-30 181.3 19.9 177 58-244 7-206 (207)
11 d1ixza_ c.37.1.20 (A:) AAA dom 99.9 3.5E-22 2.6E-26 161.9 17.1 201 51-262 7-246 (247)
12 d1lv7a_ c.37.1.20 (A:) AAA dom 99.9 2E-21 1.4E-25 158.1 20.5 200 48-262 7-249 (256)
13 d2gnoa2 c.37.1.20 (A:11-208) g 99.8 1.6E-20 1.2E-24 146.9 15.8 136 61-201 2-139 (198)
14 d1e32a2 c.37.1.20 (A:201-458) 99.8 1.4E-19 1E-23 148.0 20.3 182 51-247 2-219 (258)
15 d1fnna2 c.37.1.20 (A:1-276) CD 99.8 1.2E-18 9E-23 143.8 24.7 220 40-263 6-271 (276)
16 d1l8qa2 c.37.1.20 (A:77-289) C 99.8 1.2E-18 8.5E-23 138.0 16.6 186 51-248 8-212 (213)
17 d1w5sa2 c.37.1.20 (A:7-293) CD 99.8 6.8E-18 5E-22 140.1 20.0 221 40-263 6-285 (287)
18 d1r7ra3 c.37.1.20 (A:471-735) 99.8 3.9E-19 2.9E-23 145.7 9.6 183 51-248 5-226 (265)
19 d1r6bx2 c.37.1.20 (X:169-436) 99.8 2.5E-17 1.8E-21 133.4 19.4 201 43-248 8-239 (268)
20 d1qvra2 c.37.1.20 (A:149-535) 99.7 7.9E-17 5.7E-21 137.7 15.8 200 44-249 13-243 (387)
21 d1d2na_ c.37.1.20 (A:) Hexamer 99.7 6.8E-16 4.9E-20 124.6 16.8 155 76-245 42-220 (246)
22 d1ny5a2 c.37.1.20 (A:138-384) 99.6 5.1E-15 3.7E-19 119.4 17.9 205 54-261 1-246 (247)
23 d1ofha_ c.37.1.20 (A:) HslU {H 99.6 6.8E-16 4.9E-20 129.1 12.0 152 54-210 15-211 (309)
24 d1jbka_ c.37.1.20 (A:) ClpB, A 99.6 4.2E-16 3.1E-20 119.3 8.1 160 44-209 13-194 (195)
25 d1r6bx3 c.37.1.20 (X:437-751) 99.6 2.9E-14 2.1E-18 119.2 17.9 168 52-232 21-258 (315)
26 d1qvra3 c.37.1.20 (A:536-850) 99.6 3.9E-14 2.8E-18 118.1 16.1 170 53-232 23-263 (315)
27 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 5.6E-14 4.1E-18 118.9 17.3 210 51-262 5-302 (333)
28 d1um8a_ c.37.1.20 (A:) ClpX {H 99.5 1.2E-13 9E-18 117.1 16.7 174 53-232 17-314 (364)
29 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.4 2.3E-12 1.7E-16 105.8 15.1 187 50-246 9-252 (283)
30 d1w44a_ c.37.1.11 (A:) NTPase 99.2 1.7E-11 1.2E-15 101.1 10.6 124 77-211 126-272 (321)
31 d1svma_ c.37.1.20 (A:) Papillo 99.2 2.7E-13 2E-17 114.8 -2.0 148 76-244 156-331 (362)
32 d2a5yb3 c.37.1.20 (B:109-385) 99.2 6.1E-10 4.4E-14 91.0 17.7 180 54-242 21-228 (277)
33 d1g41a_ c.37.1.20 (A:) HslU {H 99.1 1.4E-08 9.9E-13 87.8 20.7 83 182-264 316-431 (443)
34 d1tuea_ c.37.1.20 (A:) Replica 98.8 2.9E-08 2.1E-12 75.0 10.7 117 60-198 38-172 (205)
35 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.7 9.5E-08 6.9E-12 72.1 11.1 25 76-100 2-26 (178)
36 d2i3ba1 c.37.1.11 (A:1-189) Ca 98.4 6.7E-07 4.9E-11 67.5 8.9 28 75-102 2-29 (189)
37 d1gvnb_ c.37.1.21 (B:) Plasmid 98.4 2E-07 1.5E-11 75.3 5.8 56 52-112 6-65 (273)
38 d1w36d1 c.37.1.19 (D:2-360) Ex 98.2 9.7E-06 7.1E-10 67.7 12.5 116 59-181 151-298 (359)
39 d1ly1a_ c.37.1.1 (A:) Polynucl 98.2 1.6E-05 1.2E-09 57.7 12.1 22 77-98 5-26 (152)
40 d1yj5a2 c.37.1.1 (A:351-522) 5 98.2 2.8E-06 2E-10 63.5 7.7 77 75-169 15-91 (172)
41 d1u0ja_ c.37.1.20 (A:) Rep 40 98.1 1E-05 7.6E-10 64.6 11.2 125 61-209 89-247 (267)
42 d2qy9a2 c.37.1.10 (A:285-495) 98.1 1.1E-05 8.2E-10 61.7 10.0 36 75-110 9-45 (211)
43 d1vmaa2 c.37.1.10 (A:82-294) G 98.1 1.3E-05 9.4E-10 61.5 9.9 38 77-114 14-51 (213)
44 d1j8yf2 c.37.1.10 (F:87-297) G 98.0 3.6E-05 2.6E-09 58.9 11.9 139 77-219 15-182 (211)
45 d1okkd2 c.37.1.10 (D:97-303) G 98.0 2.3E-05 1.7E-09 59.8 10.8 41 74-114 6-46 (207)
46 d1rkba_ c.37.1.1 (A:) Adenylat 98.0 2.9E-06 2.1E-10 63.1 4.8 25 74-98 4-28 (173)
47 d1ls1a2 c.37.1.10 (A:89-295) G 98.0 6E-05 4.4E-09 57.5 12.0 36 77-112 13-48 (207)
48 d1a1va1 c.37.1.14 (A:190-325) 97.9 3E-05 2.2E-09 55.2 9.3 87 76-168 10-121 (136)
49 d1kaga_ c.37.1.2 (A:) Shikimat 97.9 4.4E-06 3.2E-10 61.5 4.5 23 76-98 4-26 (169)
50 d2pmka1 c.37.1.12 (A:467-707) 97.8 3.3E-05 2.4E-09 60.5 8.8 45 140-184 156-201 (241)
51 d1np6a_ c.37.1.10 (A:) Molybdo 97.8 9E-06 6.5E-10 60.2 4.9 39 75-113 3-41 (170)
52 d1yksa1 c.37.1.14 (A:185-324) 97.8 5.5E-05 4E-09 53.7 9.1 24 75-98 8-32 (140)
53 d1lw7a2 c.37.1.1 (A:220-411) T 97.8 5.6E-06 4.1E-10 62.3 3.8 24 75-98 8-31 (192)
54 d1e6ca_ c.37.1.2 (A:) Shikimat 97.8 4.1E-05 3E-09 56.7 8.6 29 76-109 4-32 (170)
55 d2iyva1 c.37.1.2 (A:2-166) Shi 97.8 6.1E-06 4.4E-10 61.1 3.8 30 75-109 2-31 (165)
56 d1bifa1 c.37.1.7 (A:37-249) 6- 97.8 2.3E-05 1.7E-09 60.2 6.8 28 77-104 5-32 (213)
57 d1y63a_ c.37.1.1 (A:) Probable 97.8 7.7E-06 5.6E-10 60.9 3.8 26 73-98 4-29 (174)
58 d1p9ra_ c.37.1.11 (A:) Extrace 97.7 0.00026 1.9E-08 59.9 13.4 111 50-178 135-258 (401)
59 d1m8pa3 c.37.1.15 (A:391-573) 97.7 1E-05 7.6E-10 60.4 3.9 26 77-102 9-34 (183)
60 d1x6va3 c.37.1.4 (A:34-228) Ad 97.7 1.2E-05 8.5E-10 61.0 4.1 27 77-103 22-48 (195)
61 d2fz4a1 c.37.1.19 (A:24-229) D 97.7 0.00018 1.3E-08 54.9 11.0 41 55-98 69-109 (206)
62 d3b60a1 c.37.1.12 (A:329-581) 97.7 9.2E-05 6.7E-09 58.4 9.3 44 141-184 170-214 (253)
63 d1knqa_ c.37.1.17 (A:) Glucona 97.7 1.3E-05 9.6E-10 59.4 4.1 22 77-98 9-30 (171)
64 d2bdta1 c.37.1.25 (A:1-176) Hy 97.7 9.6E-06 7E-10 60.2 3.2 22 77-98 5-26 (176)
65 d1viaa_ c.37.1.2 (A:) Shikimat 97.7 1.4E-05 1E-09 58.8 3.8 29 76-109 2-30 (161)
66 d1l2ta_ c.37.1.12 (A:) MJ0796 97.6 9.2E-05 6.7E-09 57.3 8.4 43 140-182 162-207 (230)
67 d1qhxa_ c.37.1.3 (A:) Chloramp 97.6 2.7E-05 2E-09 57.8 5.2 23 76-98 5-27 (178)
68 d2hyda1 c.37.1.12 (A:324-578) 97.6 6.5E-05 4.7E-09 59.3 7.6 44 141-184 172-216 (255)
69 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.6 1.3E-05 9.8E-10 59.6 2.8 32 76-112 6-37 (176)
70 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.6 2.3E-05 1.7E-09 59.5 4.0 26 73-98 5-30 (194)
71 d2awna2 c.37.1.12 (A:4-235) Ma 97.5 0.00016 1.2E-08 55.9 8.5 43 141-183 148-193 (232)
72 d1zj6a1 c.37.1.8 (A:2-178) ADP 97.5 0.00098 7.1E-08 49.0 12.7 34 63-97 5-38 (177)
73 d1zaka1 c.37.1.1 (A:3-127,A:15 97.5 2.9E-05 2.1E-09 58.7 3.9 25 74-98 3-27 (189)
74 d1khta_ c.37.1.1 (A:) Adenylat 97.5 4.4E-05 3.2E-09 57.2 4.8 32 76-107 3-34 (190)
75 d1jj7a_ c.37.1.12 (A:) Peptide 97.5 0.00021 1.5E-08 56.2 8.7 43 140-182 168-213 (251)
76 d1g6oa_ c.37.1.11 (A:) Hexamer 97.5 0.00036 2.6E-08 57.0 10.3 39 59-99 153-191 (323)
77 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.5 5.2E-05 3.8E-09 57.3 4.8 27 72-98 4-30 (189)
78 d1jqlb_ c.37.1.20 (B:) delta s 97.5 0.00049 3.6E-08 48.9 9.8 124 65-197 9-139 (140)
79 d1v43a3 c.37.1.12 (A:7-245) Hy 97.5 0.00031 2.2E-08 54.5 9.2 44 140-183 153-199 (239)
80 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.5 6.7E-05 4.9E-09 56.6 5.3 24 75-98 4-27 (190)
81 d1zina1 c.37.1.1 (A:1-125,A:16 97.4 5.7E-05 4.2E-09 56.4 4.7 23 76-98 2-24 (182)
82 d1akya1 c.37.1.1 (A:3-130,A:16 97.4 0.00049 3.6E-08 51.1 9.8 23 76-98 4-26 (180)
83 d1ukza_ c.37.1.1 (A:) Uridylat 97.4 5.2E-05 3.8E-09 57.6 4.3 24 75-98 9-32 (196)
84 d1vpla_ c.37.1.12 (A:) Putativ 97.4 0.00023 1.7E-08 55.4 8.2 44 140-183 150-195 (238)
85 d1z2aa1 c.37.1.8 (A:8-171) Rab 97.4 0.00022 1.6E-08 52.2 7.7 21 77-97 5-25 (164)
86 d1mv5a_ c.37.1.12 (A:) Multidr 97.4 8.6E-05 6.3E-09 58.2 5.6 43 141-183 157-200 (242)
87 d1nksa_ c.37.1.1 (A:) Adenylat 97.4 5E-05 3.7E-09 57.1 4.1 30 76-105 3-32 (194)
88 d2cdna1 c.37.1.1 (A:1-181) Ade 97.4 7.4E-05 5.4E-09 55.9 4.7 23 76-98 2-24 (181)
89 d1rz3a_ c.37.1.6 (A:) Hypothet 97.4 0.00014 1E-08 54.8 6.2 27 77-103 25-51 (198)
90 d1teva_ c.37.1.1 (A:) UMP/CMP 97.4 7.1E-05 5.2E-09 56.6 4.5 24 75-98 2-25 (194)
91 d1xjca_ c.37.1.10 (A:) Molybdo 97.4 8E-05 5.8E-09 54.8 4.5 37 76-112 3-39 (165)
92 d1r2qa_ c.37.1.8 (A:) Rab5a {H 97.3 0.0011 7.7E-08 48.7 10.8 22 77-98 9-30 (170)
93 d2onka1 c.37.1.12 (A:1-240) Mo 97.3 0.00026 1.9E-08 54.9 7.5 52 140-192 143-197 (240)
94 d3d31a2 c.37.1.12 (A:1-229) Su 97.3 0.00038 2.8E-08 53.6 8.4 44 140-183 144-190 (229)
95 d1kaoa_ c.37.1.8 (A:) Rap2a {H 97.3 0.0032 2.3E-07 45.8 13.3 22 77-98 6-27 (167)
96 d1r8sa_ c.37.1.8 (A:) ADP-ribo 97.3 0.0064 4.6E-07 43.4 14.8 22 77-98 3-24 (160)
97 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.3 9.5E-05 6.9E-09 55.3 4.5 23 76-98 2-24 (182)
98 d2eyqa3 c.37.1.19 (A:546-778) 97.3 0.0025 1.8E-07 49.1 12.7 49 52-100 54-102 (233)
99 d3adka_ c.37.1.1 (A:) Adenylat 97.3 9.5E-05 7E-09 55.9 4.5 24 75-98 9-32 (194)
100 d1ckea_ c.37.1.1 (A:) CMP kina 97.3 0.00011 8.1E-09 56.7 4.9 25 74-98 3-27 (225)
101 d1ji0a_ c.37.1.12 (A:) Branche 97.3 0.00042 3E-08 54.0 8.2 52 140-192 156-209 (240)
102 d1g2912 c.37.1.12 (1:1-240) Ma 97.3 0.00032 2.4E-08 54.5 7.5 44 140-183 156-202 (240)
103 d2gj8a1 c.37.1.8 (A:216-376) P 97.3 0.00064 4.6E-08 49.3 8.6 43 141-183 82-124 (161)
104 d1yzqa1 c.37.1.8 (A:14-177) Ra 97.3 0.0016 1.1E-07 47.3 10.8 21 77-97 3-23 (164)
105 d1wp9a1 c.37.1.19 (A:1-200) pu 97.3 0.00059 4.3E-08 51.5 8.6 22 76-97 25-46 (200)
106 d1z0fa1 c.37.1.8 (A:8-173) Rab 97.2 0.0021 1.5E-07 46.8 11.3 22 77-98 7-28 (166)
107 d3dhwc1 c.37.1.12 (C:1-240) Me 97.2 0.00019 1.4E-08 55.8 5.4 44 140-183 157-203 (240)
108 d1e4va1 c.37.1.1 (A:1-121,A:15 97.2 0.00012 9E-09 54.5 4.1 23 76-98 2-24 (179)
109 d1u8za_ c.37.1.8 (A:) Ras-rela 97.2 0.0031 2.3E-07 46.0 11.9 21 77-97 7-27 (168)
110 d2p67a1 c.37.1.10 (A:1-327) LA 97.2 0.00032 2.3E-08 57.4 6.8 45 73-117 53-97 (327)
111 d1m7ga_ c.37.1.4 (A:) Adenosin 97.2 0.00019 1.4E-08 54.9 5.0 34 66-99 16-49 (208)
112 d1r0wa_ c.37.1.12 (A:) Cystic 97.2 0.00058 4.2E-08 54.5 8.1 25 75-99 63-87 (281)
113 d2p6ra3 c.37.1.19 (A:1-202) He 97.2 0.00042 3E-08 52.6 6.9 38 141-178 138-179 (202)
114 d2ew1a1 c.37.1.8 (A:4-174) Rab 97.2 0.002 1.5E-07 47.1 10.6 22 77-98 8-29 (171)
115 d1ctqa_ c.37.1.8 (A:) cH-p21 R 97.1 0.0025 1.8E-07 46.4 10.8 22 77-98 6-27 (166)
116 d1oxxk2 c.37.1.12 (K:1-242) Gl 97.1 0.00044 3.2E-08 53.7 6.7 44 140-183 157-203 (242)
117 d1u94a1 c.37.1.11 (A:6-268) Re 97.1 0.001 7.3E-08 52.6 8.9 28 76-103 56-83 (263)
118 d1qdea_ c.37.1.19 (A:) Initiat 97.1 0.0019 1.4E-07 49.2 10.2 39 141-179 151-190 (212)
119 d1tf7a2 c.37.1.11 (A:256-497) 97.1 0.0002 1.4E-08 56.1 4.5 45 65-109 15-61 (242)
120 d2qm8a1 c.37.1.10 (A:5-327) Me 97.1 0.00037 2.7E-08 57.0 6.2 41 75-115 52-92 (323)
121 d1g6ha_ c.37.1.12 (A:) MJ1267 97.1 0.00048 3.5E-08 54.2 6.6 52 140-192 167-220 (254)
122 d1sgwa_ c.37.1.12 (A:) Putativ 97.1 0.00054 3.9E-08 51.9 6.6 24 76-99 29-52 (200)
123 d2atva1 c.37.1.8 (A:5-172) Ras 97.1 0.0018 1.3E-07 47.4 9.4 22 77-98 5-26 (168)
124 d1q3ta_ c.37.1.1 (A:) CMP kina 97.1 0.00023 1.7E-08 54.9 4.5 22 77-98 6-27 (223)
125 d2fn4a1 c.37.1.8 (A:24-196) r- 97.0 0.0011 8.3E-08 48.7 8.1 22 77-98 9-30 (173)
126 d1c1ya_ c.37.1.8 (A:) Rap1A {H 97.0 0.0042 3.1E-07 45.1 11.2 22 77-98 6-27 (167)
127 d2a5ja1 c.37.1.8 (A:9-181) Rab 97.0 0.0015 1.1E-07 48.0 8.6 21 77-97 6-26 (173)
128 d1wb9a2 c.37.1.12 (A:567-800) 97.0 0.0024 1.7E-07 49.4 10.1 24 75-98 42-65 (234)
129 d1nrjb_ c.37.1.8 (B:) Signal r 97.0 0.0045 3.3E-07 46.6 11.7 24 75-98 4-27 (209)
130 d1veca_ c.37.1.19 (A:) DEAD bo 97.0 0.0024 1.8E-07 48.4 9.9 38 141-178 146-184 (206)
131 d1l7vc_ c.37.1.12 (C:) ABC tra 97.0 0.00067 4.8E-08 52.6 6.6 43 141-183 150-194 (231)
132 d2g9na1 c.37.1.19 (A:21-238) I 97.0 0.0023 1.7E-07 49.0 9.7 41 141-181 155-196 (218)
133 d4tmka_ c.37.1.1 (A:) Thymidyl 97.0 0.00068 5E-08 51.7 6.5 35 75-109 3-37 (210)
134 d1mkya1 c.37.1.8 (A:2-172) Pro 97.0 0.022 1.6E-06 41.1 14.9 21 77-97 3-23 (171)
135 d1gkya_ c.37.1.1 (A:) Guanylat 97.0 0.00023 1.7E-08 53.4 3.5 22 77-98 4-25 (186)
136 d1lvga_ c.37.1.1 (A:) Guanylat 96.9 0.00026 1.9E-08 53.2 3.6 22 77-98 3-24 (190)
137 d1b0ua_ c.37.1.12 (A:) ATP-bin 96.9 0.00076 5.5E-08 53.1 6.4 52 140-192 166-219 (258)
138 d1pzna2 c.37.1.11 (A:96-349) D 96.9 0.00091 6.6E-08 52.3 6.8 23 77-99 39-61 (254)
139 d2f9la1 c.37.1.8 (A:8-182) Rab 96.9 0.0024 1.8E-07 46.9 8.9 21 77-97 7-27 (175)
140 d1z0ja1 c.37.1.8 (A:2-168) Rab 96.9 0.0051 3.7E-07 44.6 10.6 22 77-98 7-28 (167)
141 d2fh5b1 c.37.1.8 (B:63-269) Si 96.9 0.0027 1.9E-07 48.1 9.3 23 76-98 2-24 (207)
142 d2gjsa1 c.37.1.8 (A:91-258) Ra 96.9 0.0034 2.4E-07 45.8 9.5 21 77-97 4-24 (168)
143 d1wf3a1 c.37.1.8 (A:3-180) GTP 96.9 0.0095 6.9E-07 43.6 12.2 103 76-183 7-127 (178)
144 d1s2ma1 c.37.1.19 (A:46-251) P 96.9 0.0032 2.3E-07 47.7 9.5 39 141-179 143-182 (206)
145 d1ksha_ c.37.1.8 (A:) ADP-ribo 96.9 0.0024 1.8E-07 46.3 8.6 22 76-97 4-25 (165)
146 d3raba_ c.37.1.8 (A:) Rab3a {R 96.8 0.004 2.9E-07 45.3 9.7 21 77-97 8-28 (169)
147 d1i2ma_ c.37.1.8 (A:) Ran {Hum 96.8 0.0045 3.3E-07 45.1 10.0 22 77-98 6-27 (170)
148 d1cr2a_ c.37.1.11 (A:) Gene 4 96.8 0.0069 5E-07 47.9 11.8 34 76-109 37-71 (277)
149 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 96.8 0.0014 1.1E-07 48.3 7.1 22 77-98 5-26 (177)
150 d1ewqa2 c.37.1.12 (A:542-765) 96.8 0.0016 1.2E-07 50.0 7.5 23 76-98 37-59 (224)
151 d2erya1 c.37.1.8 (A:10-180) r- 96.8 0.0029 2.1E-07 46.3 8.6 21 77-97 8-28 (171)
152 d1znwa1 c.37.1.1 (A:20-201) Gu 96.8 0.00045 3.3E-08 51.5 4.0 23 76-98 4-26 (182)
153 d1t6na_ c.37.1.19 (A:) Spliceo 96.8 0.01 7.5E-07 44.8 12.0 39 141-179 145-185 (207)
154 d2j0sa1 c.37.1.19 (A:22-243) P 96.8 0.0058 4.2E-07 46.8 10.6 39 141-179 159-198 (222)
155 d1nn5a_ c.37.1.1 (A:) Thymidyl 96.8 0.00084 6.1E-08 51.2 5.6 31 76-106 5-35 (209)
156 d1hv8a1 c.37.1.19 (A:3-210) Pu 96.8 0.0039 2.9E-07 47.3 9.4 39 141-179 145-184 (208)
157 d2erxa1 c.37.1.8 (A:6-176) di- 96.8 0.0027 2E-07 46.4 8.2 21 77-97 5-25 (171)
158 d1z08a1 c.37.1.8 (A:17-183) Ra 96.7 0.0061 4.4E-07 44.2 10.0 22 77-98 6-27 (167)
159 d1n0wa_ c.37.1.11 (A:) DNA rep 96.7 0.00056 4.1E-08 52.3 4.2 26 76-101 25-50 (242)
160 d1zd9a1 c.37.1.8 (A:18-181) AD 96.7 0.0047 3.4E-07 44.7 9.1 22 77-98 5-26 (164)
161 d1htwa_ c.37.1.18 (A:) Hypothe 96.7 0.0011 7.9E-08 47.7 5.1 23 77-99 36-58 (158)
162 d2bmea1 c.37.1.8 (A:6-179) Rab 96.7 0.0042 3E-07 45.5 8.7 21 77-97 8-28 (174)
163 d1q0ua_ c.37.1.19 (A:) Probabl 96.7 0.0059 4.3E-07 46.2 9.7 39 141-179 147-186 (209)
164 d1gsia_ c.37.1.1 (A:) Thymidyl 96.6 0.0012 8.4E-08 50.1 5.4 31 77-107 3-33 (208)
165 d1e0sa_ c.37.1.8 (A:) ADP-ribo 96.6 0.0065 4.7E-07 44.3 9.5 27 71-97 9-35 (173)
166 d1fzqa_ c.37.1.8 (A:) ADP-ribo 96.6 0.0097 7E-07 43.4 10.5 21 77-97 19-39 (176)
167 d2bcgy1 c.37.1.8 (Y:3-196) GTP 96.6 0.0021 1.5E-07 48.2 6.7 21 77-97 9-29 (194)
168 d1s96a_ c.37.1.1 (A:) Guanylat 96.6 0.00073 5.3E-08 51.4 4.1 24 75-98 3-26 (205)
169 d1x1ra1 c.37.1.8 (A:10-178) Ra 96.6 0.0049 3.6E-07 44.9 8.6 22 77-98 7-28 (169)
170 d1xtqa1 c.37.1.8 (A:3-169) GTP 96.6 0.01 7.4E-07 42.9 10.2 21 77-97 7-27 (167)
171 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 96.6 0.013 9.6E-07 42.4 10.8 22 77-98 6-27 (170)
172 d1szpa2 c.37.1.11 (A:145-395) 96.6 0.00051 3.7E-08 53.5 2.9 22 77-98 37-58 (251)
173 d1kgda_ c.37.1.1 (A:) Guanylat 96.6 0.00071 5.2E-08 50.2 3.5 23 76-98 5-27 (178)
174 d2g6ba1 c.37.1.8 (A:58-227) Ra 96.5 0.0048 3.5E-07 44.9 8.2 21 77-97 9-29 (170)
175 d1v5wa_ c.37.1.11 (A:) Meiotic 96.5 0.0012 8.9E-08 51.6 5.1 23 77-99 40-62 (258)
176 d1m7ba_ c.37.1.8 (A:) RhoE (RN 96.5 0.0035 2.6E-07 46.2 7.3 22 77-98 5-26 (179)
177 d1xp8a1 c.37.1.11 (A:15-282) R 96.5 0.014 1E-06 45.9 11.1 26 77-102 60-85 (268)
178 d2atxa1 c.37.1.8 (A:9-193) Rho 96.5 0.0033 2.4E-07 46.7 7.0 22 77-98 12-33 (185)
179 d1wmsa_ c.37.1.8 (A:) Rab9a {H 96.5 0.005 3.6E-07 45.0 7.8 21 77-97 9-29 (174)
180 d1mh1a_ c.37.1.8 (A:) Rac {Hum 96.5 0.005 3.6E-07 45.5 7.8 22 77-98 8-29 (183)
181 d1ky3a_ c.37.1.8 (A:) Rab-rela 96.4 0.0044 3.2E-07 45.3 7.3 21 77-97 5-25 (175)
182 d1pjra1 c.37.1.19 (A:1-318) DE 96.4 0.0035 2.6E-07 50.7 7.1 53 75-128 25-79 (318)
183 d1mo6a1 c.37.1.11 (A:1-269) Re 96.3 0.0092 6.7E-07 46.9 9.0 36 77-114 63-98 (269)
184 d1uaaa1 c.37.1.19 (A:2-307) DE 96.3 0.0023 1.7E-07 51.4 5.7 23 75-97 15-38 (306)
185 d1sq5a_ c.37.1.6 (A:) Pantothe 96.3 0.0047 3.4E-07 49.7 7.4 25 77-101 83-107 (308)
186 d1x3sa1 c.37.1.8 (A:2-178) Rab 96.3 0.01 7.6E-07 43.4 8.7 21 77-97 10-30 (177)
187 d1uj2a_ c.37.1.6 (A:) Uridine- 96.3 0.0012 8.9E-08 50.3 3.4 24 77-100 5-28 (213)
188 d1svia_ c.37.1.8 (A:) Probable 96.2 0.038 2.8E-06 40.8 11.9 23 74-96 23-45 (195)
189 d1ihua2 c.37.1.10 (A:308-586) 96.2 0.0031 2.3E-07 50.0 5.7 50 63-112 9-58 (279)
190 d2i1qa2 c.37.1.11 (A:65-322) D 96.2 0.0015 1.1E-07 50.8 3.4 24 77-100 37-60 (258)
191 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 96.2 0.0019 1.4E-07 47.6 3.9 22 76-97 15-36 (186)
192 d2ngra_ c.37.1.8 (A:) CDC42 {H 96.1 0.007 5.1E-07 45.0 7.0 22 77-98 6-27 (191)
193 d1yrba1 c.37.1.10 (A:1-244) AT 96.1 0.0017 1.3E-07 50.3 3.6 23 77-99 3-25 (244)
194 d1u0la2 c.37.1.8 (A:69-293) Pr 96.1 0.0026 1.9E-07 48.6 4.5 33 62-97 86-118 (225)
195 d1a7ja_ c.37.1.6 (A:) Phosphor 96.1 0.00089 6.5E-08 53.3 1.7 40 73-112 3-42 (288)
196 d2qtvb1 c.37.1.8 (B:24-189) SA 96.1 0.002 1.5E-07 46.3 3.6 22 76-97 2-23 (166)
197 d1nlfa_ c.37.1.11 (A:) Hexamer 96.1 0.0062 4.5E-07 48.0 6.8 24 76-99 31-54 (274)
198 d1h65a_ c.37.1.8 (A:) Chloropl 96.0 0.027 2E-06 43.9 10.4 22 76-97 34-55 (257)
199 d1g5ta_ c.37.1.11 (A:) ATP:cor 96.0 0.0092 6.7E-07 42.6 6.8 112 77-192 5-145 (157)
200 d1tf7a1 c.37.1.11 (A:14-255) C 96.0 0.0019 1.4E-07 49.8 3.3 22 76-97 28-49 (242)
201 d1upta_ c.37.1.8 (A:) ADP-ribo 96.0 0.0021 1.5E-07 46.5 3.3 22 77-98 8-29 (169)
202 d1g16a_ c.37.1.8 (A:) Rab-rela 95.9 0.0065 4.8E-07 44.0 5.8 21 77-97 5-25 (166)
203 d2bmfa2 c.37.1.14 (A:178-482) 95.9 0.021 1.5E-06 45.5 9.3 15 75-89 10-24 (305)
204 d1tmka_ c.37.1.1 (A:) Thymidyl 95.9 0.0031 2.3E-07 48.1 3.9 28 73-100 2-29 (214)
205 d1odfa_ c.37.1.6 (A:) Hypothet 95.8 0.0072 5.2E-07 47.9 6.0 24 77-100 30-53 (286)
206 d1ihua1 c.37.1.10 (A:1-296) Ar 95.8 0.0054 3.9E-07 49.0 5.3 39 74-112 8-46 (296)
207 d2vp4a1 c.37.1.1 (A:12-208) De 95.8 0.0013 9.6E-08 49.4 1.4 23 76-98 11-33 (197)
208 d2fu5c1 c.37.1.8 (C:3-175) Rab 95.7 0.0043 3.1E-07 45.4 4.2 21 77-97 9-29 (173)
209 d1kkma_ c.91.1.2 (A:) HPr kina 95.7 0.0028 2E-07 46.5 3.0 22 76-97 16-37 (176)
210 d2qw6a1 a.80.1.2 (A:241-328) U 95.7 0.011 8.1E-07 37.1 5.3 39 268-308 2-40 (88)
211 d1xbta1 c.37.1.24 (A:18-150) T 95.6 0.056 4.1E-06 37.3 9.3 27 77-103 5-31 (133)
212 d2f7sa1 c.37.1.8 (A:5-190) Rab 95.5 0.004 2.9E-07 46.2 3.2 21 77-97 8-28 (186)
213 d1z06a1 c.37.1.8 (A:32-196) Ra 95.4 0.0049 3.5E-07 44.6 3.3 21 77-97 5-25 (165)
214 d1knxa2 c.91.1.2 (A:133-309) H 95.4 0.0029 2.1E-07 46.4 2.0 22 76-97 17-38 (177)
215 d2ocpa1 c.37.1.1 (A:37-277) De 95.4 0.0042 3.1E-07 48.1 3.1 25 76-100 4-28 (241)
216 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 95.4 0.0049 3.5E-07 45.6 3.3 21 77-97 5-25 (184)
217 d1moza_ c.37.1.8 (A:) ADP-ribo 95.3 0.005 3.6E-07 45.4 3.3 20 76-95 19-38 (182)
218 d1oywa2 c.37.1.19 (A:1-206) Re 95.3 0.031 2.3E-06 41.8 8.0 22 75-96 41-62 (206)
219 d1ko7a2 c.91.1.2 (A:130-298) H 95.3 0.0039 2.8E-07 45.4 2.6 22 76-97 17-38 (169)
220 d2jdid3 c.37.1.11 (D:82-357) C 95.3 0.27 2E-05 38.2 13.5 87 60-152 57-143 (276)
221 d1gm5a3 c.37.1.19 (A:286-549) 95.3 0.01 7.5E-07 46.4 5.0 43 57-99 87-129 (264)
222 d1p5zb_ c.37.1.1 (B:) Deoxycyt 95.2 0.0019 1.4E-07 50.1 0.4 25 75-99 3-27 (241)
223 d1xx6a1 c.37.1.24 (A:2-142) Th 95.1 0.035 2.5E-06 38.9 6.9 26 77-102 10-35 (141)
224 d1sxjc1 a.80.1.1 (C:239-333) R 95.0 0.029 2.1E-06 36.3 5.9 42 267-308 3-44 (95)
225 d1uf9a_ c.37.1.1 (A:) Dephosph 95.0 0.0064 4.7E-07 45.2 2.9 19 77-95 6-24 (191)
226 d2cxxa1 c.37.1.8 (A:2-185) GTP 95.0 0.0055 4E-07 45.1 2.5 21 77-97 3-23 (184)
227 d2g3ya1 c.37.1.8 (A:73-244) GT 95.0 0.0072 5.3E-07 44.1 3.2 21 77-97 6-26 (172)
228 d2b8ta1 c.37.1.24 (A:11-149) T 94.9 0.12 9E-06 35.8 9.4 35 141-178 79-113 (139)
229 d1rifa_ c.37.1.23 (A:) DNA hel 94.8 0.052 3.8E-06 42.9 8.2 41 55-98 112-152 (282)
230 d1cp2a_ c.37.1.10 (A:) Nitroge 94.7 0.015 1.1E-06 45.7 4.5 38 76-113 3-40 (269)
231 d1t9ha2 c.37.1.8 (A:68-298) Pr 94.5 0.001 7.3E-08 51.2 -2.7 23 76-98 99-121 (231)
232 d1wb1a4 c.37.1.8 (A:1-179) Elo 94.5 0.25 1.8E-05 35.7 10.8 21 76-96 7-27 (179)
233 d1nija1 c.37.1.10 (A:2-223) Hy 94.3 0.0078 5.7E-07 46.0 2.0 24 74-97 3-26 (222)
234 d1xpua3 c.37.1.11 (A:129-417) 94.3 0.07 5.1E-06 42.0 7.7 35 65-99 34-68 (289)
235 d1e9ra_ c.37.1.11 (A:) Bacteri 94.3 0.015 1.1E-06 49.2 3.9 29 75-103 51-79 (433)
236 d1byia_ c.37.1.10 (A:) Dethiob 94.3 0.014 1.1E-06 44.0 3.5 34 76-109 3-37 (224)
237 d1azta2 c.37.1.8 (A:35-65,A:20 94.3 0.03 2.2E-06 42.5 5.4 22 77-98 9-30 (221)
238 d1zcba2 c.37.1.8 (A:47-75,A:20 94.2 0.012 9E-07 43.7 2.9 18 77-94 5-22 (200)
239 g1f2t.1 c.37.1.12 (A:,B:) Rad5 94.2 0.015 1.1E-06 46.0 3.5 22 77-98 26-47 (292)
240 d1egaa1 c.37.1.8 (A:4-182) GTP 94.1 0.012 8.8E-07 42.9 2.7 22 76-97 7-28 (179)
241 d2afhe1 c.37.1.10 (E:1-289) Ni 94.1 0.02 1.5E-06 45.4 4.2 38 76-113 4-41 (289)
242 d1iqpa1 a.80.1.1 (A:233-327) R 94.1 0.061 4.4E-06 34.7 5.8 43 266-308 3-45 (95)
243 d1vhta_ c.37.1.1 (A:) Dephosph 94.0 0.016 1.2E-06 43.6 3.3 19 77-95 6-24 (208)
244 d2bmja1 c.37.1.8 (A:66-240) Ce 94.0 0.018 1.3E-06 42.1 3.3 22 77-98 8-29 (175)
245 d1g7sa4 c.37.1.8 (A:1-227) Ini 93.9 0.19 1.4E-05 37.9 9.5 25 74-98 5-29 (227)
246 d1mkya2 c.37.1.8 (A:173-358) P 93.8 0.018 1.3E-06 42.3 3.1 21 77-97 11-31 (186)
247 d2jdia3 c.37.1.11 (A:95-379) C 93.8 0.38 2.8E-05 37.6 11.1 36 60-98 57-92 (285)
248 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 93.7 0.017 1.2E-06 42.8 2.9 22 77-98 5-26 (200)
249 d1lnza2 c.37.1.8 (A:158-342) O 93.7 0.016 1.2E-06 42.6 2.6 21 76-96 3-23 (185)
250 d1puia_ c.37.1.8 (A:) Probable 93.6 0.0095 6.9E-07 43.7 1.2 22 75-96 17-38 (188)
251 d1udxa2 c.37.1.8 (A:157-336) O 93.6 0.015 1.1E-06 42.6 2.3 23 75-97 2-24 (180)
252 d1osna_ c.37.1.1 (A:) Thymidin 93.6 0.014 1E-06 47.3 2.3 26 77-102 8-33 (331)
253 d1jjva_ c.37.1.1 (A:) Dephosph 93.6 0.018 1.3E-06 43.3 2.8 19 77-95 5-23 (205)
254 d1lkxa_ c.37.1.9 (A:) Myosin S 93.6 0.055 4E-06 48.4 6.4 56 43-98 53-110 (684)
255 d1z63a1 c.37.1.19 (A:432-661) 93.6 0.31 2.2E-05 36.8 10.2 114 76-192 33-174 (230)
256 d1g8fa3 c.37.1.15 (A:390-511) 93.6 0.11 8.2E-06 34.8 6.5 24 77-100 9-32 (122)
257 d1xzpa2 c.37.1.8 (A:212-371) T 93.6 0.0063 4.6E-07 43.6 0.1 22 77-98 3-24 (160)
258 d1ys7a2 c.23.1.1 (A:7-127) Tra 93.4 0.57 4.2E-05 31.3 10.3 75 141-217 45-121 (121)
259 d1jr3a1 a.80.1.1 (A:243-368) g 93.3 0.092 6.7E-06 35.7 6.0 42 266-308 3-44 (126)
260 d1deka_ c.37.1.1 (A:) Deoxynuc 93.2 0.028 2E-06 43.2 3.5 23 76-98 3-25 (241)
261 d1fx0a3 c.37.1.11 (A:97-372) C 93.2 0.25 1.8E-05 38.6 9.1 24 75-98 68-91 (276)
262 d1p6xa_ c.37.1.1 (A:) Thymidin 93.2 0.022 1.6E-06 46.2 2.8 24 77-100 9-32 (333)
263 d1d0xa2 c.37.1.9 (A:2-33,A:80- 93.1 0.07 5.1E-06 47.8 6.4 56 43-98 92-149 (712)
264 d2dy1a2 c.37.1.8 (A:8-274) Elo 93.1 0.62 4.5E-05 36.0 11.3 23 76-98 4-26 (267)
265 d1svsa1 c.37.1.8 (A:32-60,A:18 92.9 0.031 2.3E-06 41.0 3.3 22 77-98 5-26 (195)
266 d1qhla_ c.37.1.12 (A:) Cell di 92.9 0.0092 6.7E-07 44.4 0.1 24 77-100 27-50 (222)
267 g1xew.1 c.37.1.12 (X:,Y:) Smc 92.9 0.019 1.4E-06 46.3 2.1 23 76-98 28-50 (329)
268 d2c78a3 c.37.1.8 (A:9-212) Elo 92.8 1.2 8.6E-05 32.7 12.2 23 76-98 5-27 (204)
269 g1ii8.1 c.37.1.12 (A:,B:) Rad5 92.6 0.03 2.2E-06 45.2 2.9 23 76-98 25-47 (369)
270 d1br2a2 c.37.1.9 (A:80-789) My 92.6 0.097 7E-06 47.0 6.5 55 44-98 59-115 (710)
271 d1w7ja2 c.37.1.9 (A:63-792) My 92.5 0.094 6.8E-06 47.2 6.4 56 43-98 61-118 (730)
272 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 92.5 0.082 5.9E-06 46.5 6.0 26 75-100 25-51 (623)
273 d2mysa2 c.37.1.9 (A:4-33,A:80- 92.4 0.092 6.7E-06 47.7 6.2 54 45-98 92-147 (794)
274 d1hyqa_ c.37.1.10 (A:) Cell di 92.3 0.058 4.2E-06 40.9 4.1 36 77-112 5-40 (232)
275 d1kk8a2 c.37.1.9 (A:1-28,A:77- 92.0 0.093 6.8E-06 47.6 5.8 55 45-99 90-146 (789)
276 d1sxjd1 a.80.1.1 (D:263-353) R 91.7 0.092 6.7E-06 33.4 3.9 40 268-308 4-43 (91)
277 d1e2ka_ c.37.1.1 (A:) Thymidin 91.4 0.035 2.5E-06 44.8 1.9 23 77-99 7-29 (329)
278 d1n0ua2 c.37.1.8 (A:3-343) Elo 91.3 2.2 0.00016 34.0 12.9 41 141-184 121-161 (341)
279 d1gkub1 c.37.1.16 (B:1-250) He 91.2 0.11 8.2E-06 39.5 4.8 24 75-98 59-82 (237)
280 d1e69a_ c.37.1.12 (A:) Smc hea 90.9 0.041 3E-06 43.8 2.0 23 76-98 26-48 (308)
281 d2bv3a2 c.37.1.8 (A:7-282) Elo 90.9 2.7 0.00019 32.4 15.3 24 75-98 7-30 (276)
282 d1d2ea3 c.37.1.8 (A:55-250) El 90.9 1.2 8.5E-05 32.5 10.1 23 76-98 5-27 (196)
283 d1w1wa_ c.37.1.12 (A:) Smc hea 90.3 0.068 5E-06 44.4 2.9 22 77-98 28-49 (427)
284 d1tq4a_ c.37.1.8 (A:) Interfer 90.3 0.07 5.1E-06 44.4 2.9 22 75-96 57-78 (400)
285 d1g3qa_ c.37.1.10 (A:) Cell di 90.1 0.11 8.2E-06 39.2 3.8 35 77-111 5-40 (237)
286 d1z3ix2 c.37.1.19 (X:92-389) R 89.5 1.8 0.00013 33.7 10.9 47 141-188 192-238 (298)
287 d1t5la1 c.37.1.19 (A:2-414) Nu 89.5 0.55 4E-05 38.8 7.8 65 58-129 16-80 (413)
288 d1c4oa1 c.37.1.19 (A:2-409) Nu 89.4 2.9 0.00021 34.3 12.3 65 58-129 13-77 (408)
289 d1j3ba1 c.91.1.1 (A:212-529) P 89.1 0.066 4.8E-06 42.6 1.7 18 76-93 16-33 (318)
290 d1ry6a_ c.37.1.9 (A:) Kinesin 88.7 0.1 7.6E-06 42.1 2.7 26 67-92 78-103 (330)
291 d2olra1 c.91.1.1 (A:228-540) P 88.5 0.087 6.4E-06 41.7 2.0 23 196-218 185-207 (313)
292 d1kgsa2 c.23.1.1 (A:2-123) Pho 88.0 2 0.00015 28.3 8.8 74 141-216 45-120 (122)
293 d1bg2a_ c.37.1.9 (A:) Kinesin 87.7 0.22 1.6E-05 40.0 4.0 22 71-92 73-94 (323)
294 d1ii2a1 c.91.1.1 (A:201-523) P 87.5 0.11 8.2E-06 41.3 2.1 17 76-92 16-32 (323)
295 d1kk1a3 c.37.1.8 (A:6-200) Ini 86.6 4.1 0.0003 29.1 10.6 20 77-96 8-27 (195)
296 d1zh2a1 c.23.1.1 (A:2-120) Tra 85.9 3.2 0.00023 27.1 9.1 73 141-216 44-118 (119)
297 d2a9pa1 c.23.1.1 (A:2-118) DNA 85.6 3.3 0.00024 27.0 9.2 71 141-214 44-116 (117)
298 d2qn6a3 c.37.1.8 (A:2-206) Ini 85.6 4.9 0.00036 29.0 10.9 21 76-96 10-30 (205)
299 d1goja_ c.37.1.9 (A:) Kinesin 85.4 0.33 2.4E-05 39.4 3.9 21 71-91 77-97 (354)
300 d1krwa_ c.23.1.1 (A:) NTRC rec 85.2 1.3 9.4E-05 29.4 6.5 73 141-215 47-121 (123)
301 d1f9va_ c.37.1.9 (A:) Kinesin 84.4 0.37 2.7E-05 38.8 3.8 35 58-92 64-101 (342)
302 d1x88a1 c.37.1.9 (A:18-362) Ki 84.2 0.36 2.6E-05 39.0 3.7 21 71-91 78-98 (345)
303 d2zfia1 c.37.1.9 (A:4-352) Kin 83.8 0.43 3.1E-05 38.6 4.0 21 71-91 84-104 (349)
304 d1dbwa_ c.23.1.1 (A:) Transcri 83.7 4.3 0.00031 26.7 8.8 71 141-213 47-119 (123)
305 d1ny5a1 c.23.1.1 (A:1-137) Tra 83.5 4.7 0.00034 27.0 9.2 72 141-214 44-117 (137)
306 d1xhfa1 c.23.1.1 (A:2-122) Aer 83.2 4.4 0.00032 26.5 9.8 71 141-215 46-119 (121)
307 d1qkka_ c.23.1.1 (A:) Transcri 83.1 1.1 8.2E-05 30.6 5.5 73 141-215 44-118 (140)
308 d1u0sy_ c.23.1.1 (Y:) CheY pro 82.7 4.5 0.00033 26.3 8.8 70 141-212 46-117 (118)
309 d1tafb_ a.22.1.3 (B:) TAF(II)6 82.6 3.1 0.00023 24.4 6.6 55 209-263 12-69 (70)
310 d2pl1a1 c.23.1.1 (A:1-119) Pho 82.4 4.7 0.00034 26.3 9.7 72 141-215 44-118 (119)
311 d1p2fa2 c.23.1.1 (A:1-120) Res 82.0 2.8 0.0002 27.5 7.1 74 141-216 43-118 (120)
312 d1v8ka_ c.37.1.9 (A:) Kinesin 81.8 0.34 2.5E-05 39.4 2.6 22 71-92 111-132 (362)
313 d2ncda_ c.37.1.9 (A:) Kinesin 81.4 0.24 1.7E-05 40.5 1.4 21 71-91 122-142 (368)
314 d1f5na2 c.37.1.8 (A:7-283) Int 81.1 0.6 4.4E-05 36.3 3.7 41 55-97 15-55 (277)
315 d1c9ka_ c.37.1.11 (A:) Adenosy 81.0 0.46 3.4E-05 34.3 2.8 20 77-96 2-21 (180)
316 d1w36b1 c.37.1.19 (B:1-485) Ex 80.9 1.7 0.00012 36.1 6.9 24 75-98 17-41 (485)
317 d1mvoa_ c.23.1.1 (A:) PhoP rec 80.6 5.6 0.0004 25.9 11.1 73 141-215 46-120 (121)
318 d1sdma_ c.37.1.9 (A:) Kinesin 80.0 0.51 3.7E-05 38.4 3.1 17 75-91 76-92 (364)
319 d2akab1 c.37.1.8 (B:6-304) Dyn 79.3 1.1 8.2E-05 34.9 4.9 25 73-97 25-49 (299)
320 d2huec1 a.22.1.1 (C:20-101) Hi 78.2 2.9 0.00021 25.5 5.5 58 208-265 14-74 (82)
321 g1f2t.1 c.37.1.12 (A:,B:) Rad5 77.5 1.8 0.00013 33.1 5.6 43 141-183 225-269 (292)
322 d1sxjb1 a.80.1.1 (B:231-322) R 77.4 0.93 6.8E-05 28.5 3.1 32 277-308 10-41 (92)
323 d1puja_ c.37.1.8 (A:) Probable 77.2 0.95 6.9E-05 35.0 3.8 21 77-97 115-135 (273)
324 d1ni3a1 c.37.1.8 (A:11-306) Yc 76.6 0.53 3.9E-05 37.0 2.1 21 77-97 13-33 (296)
325 d1e69a_ c.37.1.12 (A:) Smc hea 76.2 5.2 0.00038 30.7 8.2 44 141-184 241-285 (308)
326 d1zgza1 c.23.1.1 (A:2-121) Tor 75.1 8.2 0.0006 24.9 9.2 72 141-215 45-118 (120)
327 d1peya_ c.23.1.1 (A:) Sporulat 74.9 8.4 0.00061 24.9 9.7 70 141-212 45-116 (119)
328 d1jwyb_ c.37.1.8 (B:) Dynamin 74.7 0.98 7.2E-05 35.4 3.3 24 74-97 24-47 (306)
329 d1wrba1 c.37.1.19 (A:164-401) 74.6 3.8 0.00027 30.6 6.6 15 75-89 59-73 (238)
330 d2r25b1 c.23.1.1 (B:1087-1214) 73.1 8.4 0.00061 25.4 7.5 71 141-214 51-125 (128)
331 d1yioa2 c.23.1.1 (A:3-130) Res 72.9 9.9 0.00072 24.9 10.9 72 141-214 46-119 (128)
332 d2ayxa1 c.23.1.1 (A:817-949) S 72.6 10 0.00076 25.0 8.8 72 141-215 52-126 (133)
333 d1jbea_ c.23.1.1 (A:) CheY pro 71.9 6 0.00043 26.1 6.5 75 141-217 49-127 (128)
334 d1a04a2 c.23.1.1 (A:5-142) Nit 70.4 12 0.00088 24.8 10.4 86 141-229 48-135 (138)
335 d1zunb3 c.37.1.8 (B:16-237) Su 69.0 1.9 0.00014 32.1 3.5 22 77-98 12-33 (222)
336 d2b4aa1 c.23.1.1 (A:2-119) Hyp 68.1 12 0.0009 24.0 7.9 68 141-211 47-114 (118)
337 d1jala1 c.37.1.8 (A:1-278) Ych 68.0 1.8 0.00013 33.4 3.3 21 77-97 5-25 (278)
338 d1fada_ a.77.1.2 (A:) FADD (Mo 67.7 11 0.00079 23.2 7.7 59 218-276 31-91 (95)
339 d1p3da1 c.5.1.1 (A:11-106) UDP 67.1 11 0.00079 23.4 6.6 23 75-97 9-31 (96)
340 d1wxqa1 c.37.1.8 (A:1-319) GTP 66.8 1.4 0.0001 34.7 2.6 21 77-97 3-23 (319)
341 d1r0ka2 c.2.1.3 (A:3-126,A:265 65.4 5.9 0.00043 27.2 5.3 48 74-128 2-50 (150)
342 d1jnya3 c.37.1.8 (A:4-227) Elo 64.4 2.4 0.00017 31.4 3.3 22 76-97 5-26 (224)
343 g1ii8.1 c.37.1.12 (A:,B:) Rad5 61.0 5.1 0.00037 31.0 5.1 42 141-182 302-345 (369)
344 d1zesa1 c.23.1.1 (A:3-123) Pho 60.7 13 0.00095 24.0 6.4 72 141-214 44-119 (121)
345 d1f60a3 c.37.1.8 (A:2-240) Elo 60.5 3.2 0.00023 31.2 3.4 23 76-98 8-30 (239)
346 d1q0qa2 c.2.1.3 (A:1-125,A:275 60.3 22 0.0016 24.2 8.6 47 75-128 2-49 (151)
347 d1htaa_ a.22.1.2 (A:) Archaeal 56.5 15 0.0011 21.0 5.9 62 200-264 4-67 (68)
348 d1r5ba3 c.37.1.8 (A:215-459) E 55.3 2.8 0.0002 31.6 2.3 23 76-98 26-48 (245)
349 d1w1wa_ c.37.1.12 (A:) Smc hea 54.8 7.8 0.00057 31.1 5.3 41 142-182 355-397 (427)
350 d1w25a1 c.23.1.1 (A:2-140) Res 53.2 27 0.0019 23.0 10.3 71 141-214 45-120 (139)
351 d1mb3a_ c.23.1.1 (A:) Cell div 51.9 26 0.0019 22.4 9.2 72 141-214 45-120 (123)
352 d1j6ua3 c.72.2.1 (A:89-295) UD 51.8 11 0.00079 26.9 5.1 38 64-103 4-41 (207)
353 d1w25a2 c.23.1.1 (A:141-293) R 50.4 22 0.0016 24.0 6.4 72 141-214 55-130 (153)
354 d1wgla_ a.5.2.4 (A:) Toll-inte 49.1 19 0.0014 20.1 4.8 40 204-247 11-50 (59)
355 d1h75a_ c.47.1.1 (A:) Glutared 48.5 22 0.0016 20.6 6.8 34 77-115 3-36 (76)
356 d1rw1a_ c.47.1.12 (A:) Hypothe 47.5 11 0.00083 24.1 4.1 46 77-127 2-48 (114)
357 d1qo0d_ c.23.1.3 (D:) Positive 40.8 32 0.0023 23.8 6.2 70 141-213 51-122 (189)
358 d1k66a_ c.23.1.1 (A:) Response 40.8 20 0.0015 24.0 4.8 73 141-215 62-138 (149)
359 d1f6va_ a.49.1.1 (A:) C-termin 40.8 7.7 0.00056 23.8 2.1 68 193-265 6-79 (91)
360 d1s8na_ c.23.1.1 (A:) Probable 40.5 39 0.0028 23.5 6.6 72 141-215 48-121 (190)
361 d1p6qa_ c.23.1.1 (A:) CheY pro 39.8 16 0.0012 23.8 4.0 71 141-214 51-126 (129)
362 g1xew.1 c.37.1.12 (X:,Y:) Smc 38.9 56 0.004 24.6 7.9 75 141-217 246-328 (329)
363 d2gf5a1 a.77.1.2 (A:89-191) FA 37.4 41 0.003 20.7 8.5 60 219-278 32-93 (103)
364 d1h3ob_ a.22.1.3 (B:) TAF(II)- 37.3 33 0.0024 20.0 4.6 64 200-265 4-69 (74)
365 d1kjwa2 c.37.1.1 (A:526-724) G 37.3 15 0.0011 26.3 3.7 20 76-98 11-30 (199)
366 d1i3ca_ c.23.1.1 (A:) Response 37.0 51 0.0037 21.6 9.4 73 141-215 56-132 (144)
367 d1k68a_ c.23.1.1 (A:) Response 36.0 52 0.0038 21.4 6.7 71 141-214 55-130 (140)
368 d3bula1 a.46.1.1 (A:651-740) M 35.7 9.1 0.00066 23.6 1.9 34 271-305 11-44 (90)
369 d2pt0a1 c.45.1.4 (A:34-346) My 35.0 37 0.0027 26.1 6.0 41 58-98 195-236 (313)
370 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 34.0 30 0.0022 21.0 4.3 22 76-97 3-24 (89)
371 d2axpa1 c.37.1.1 (A:2-165) Hyp 33.5 22 0.0016 22.4 3.6 22 77-98 3-24 (164)
372 d1dz3a_ c.23.1.1 (A:) Sporulat 33.0 43 0.0032 21.3 5.4 72 141-214 47-121 (123)
373 d1r7ha_ c.47.1.1 (A:) Glutared 32.4 40 0.0029 19.1 6.9 34 77-115 3-36 (74)
374 d1jfib_ a.22.1.3 (B:) Negative 31.9 51 0.0037 21.6 5.6 68 200-269 5-74 (135)
375 d2jfga3 c.72.2.1 (A:94-297) UD 30.6 39 0.0028 23.5 5.2 30 72-103 9-38 (204)
376 d1wd5a_ c.61.1.1 (A:) Putative 29.8 85 0.0062 22.0 13.8 37 140-177 119-155 (208)
377 d1w36b1 c.37.1.19 (B:1-485) Ex 29.0 18 0.0013 29.3 3.5 44 141-185 377-420 (485)
378 d2gc6a1 c.59.1.2 (A:297-425) F 28.9 65 0.0047 20.3 6.3 47 144-192 13-63 (129)
379 d1j9ba_ c.47.1.12 (A:) Arsenat 28.7 70 0.0051 20.9 5.9 47 77-128 2-49 (138)
380 d1o6da_ c.116.1.3 (A:) Hypothe 28.5 76 0.0055 21.0 14.1 117 77-202 5-124 (147)
381 d1p3da3 c.72.2.1 (A:107-321) U 28.4 43 0.0031 23.6 5.2 27 76-104 14-40 (215)
382 d1f1ea_ a.22.1.2 (A:) Archaeal 28.1 65 0.0048 21.5 5.7 60 200-263 80-142 (151)
383 d1khba1 c.91.1.1 (A:260-622) C 26.3 11 0.00083 29.7 1.4 18 76-93 18-37 (363)
384 d1vkja_ c.37.1.5 (A:) Heparan 25.6 17 0.0012 26.7 2.3 25 72-96 3-27 (258)
385 d1ku5a_ a.22.1.2 (A:) Archaeal 25.4 54 0.0039 18.2 4.9 61 200-263 3-65 (66)
386 d1p15a_ c.45.1.2 (A:) Protein- 24.9 67 0.0049 23.3 5.8 20 75-94 177-196 (245)
387 d1ns5a_ c.116.1.3 (A:) Hypothe 24.5 93 0.0067 20.6 9.1 58 142-202 67-127 (153)
388 d1h3oa_ a.22.1.3 (A:) TAF(II)- 24.0 49 0.0036 17.5 3.3 44 200-246 3-47 (50)
389 d1jmxa1 a.3.1.7 (A:2-85) Quino 23.9 60 0.0044 19.3 4.3 34 198-231 29-62 (84)
390 d1w5fa1 c.32.1.1 (A:22-215) Ce 23.9 33 0.0024 24.3 3.6 34 63-98 76-113 (194)
391 d1mn3a_ a.5.2.4 (A:) Vacuolar 23.7 54 0.004 17.7 4.9 29 217-245 23-51 (54)
392 d1o51a_ d.58.5.4 (A:) Hypothet 23.4 60 0.0044 20.1 4.4 36 57-92 17-53 (102)
393 d1n1ja_ a.22.1.3 (A:) Nuclear 23.1 72 0.0053 18.9 5.8 53 217-269 19-73 (87)
394 d1gg4a1 c.59.1.1 (A:313-447) U 22.8 46 0.0034 21.7 4.0 62 109-179 16-80 (135)
395 d2bwba1 a.5.2.1 (A:328-371) DS 22.7 50 0.0037 17.0 3.7 23 221-243 19-41 (44)
396 d1texa_ c.37.1.5 (A:) Stf0 sul 22.7 34 0.0025 24.2 3.7 25 73-97 2-26 (265)
397 d2vapa1 c.32.1.1 (A:23-231) Ce 22.7 46 0.0034 23.8 4.2 33 64-98 92-128 (209)
398 d2j01f1 c.22.1.1 (F:1-208) Rib 22.6 49 0.0036 23.6 4.4 85 141-234 120-208 (208)
399 d1rq2a1 c.32.1.1 (A:8-205) Cel 21.8 45 0.0033 23.7 3.9 35 62-98 76-114 (198)
400 d1oqya1 a.5.2.1 (A:160-200) DN 21.5 38 0.0028 17.1 2.5 26 217-242 13-38 (41)
401 d1tafa_ a.22.1.3 (A:) TAF(II)4 20.9 73 0.0053 18.1 6.0 53 208-263 6-64 (68)
402 d1qzma_ c.37.1.20 (A:) ATPase 20.9 44 0.0032 20.4 3.3 49 199-247 2-62 (94)
403 d2daha1 a.5.2.1 (A:8-48) Ubiqu 20.7 54 0.0039 16.5 4.0 28 217-245 13-40 (41)
404 d1o5za1 c.59.1.2 (A:294-430) F 20.2 1E+02 0.0075 19.6 6.4 26 142-169 10-35 (137)
405 d1ucra_ a.4.5.45 (A:) Dissimil 20.1 27 0.002 20.1 1.9 32 59-90 37-73 (74)
No 1
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.3e-38 Score=256.81 Aligned_cols=222 Identities=44% Similarity=0.728 Sum_probs=203.0
Q ss_pred CcChhhhcCCCCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchH
Q 021660 40 ASPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID 119 (309)
Q Consensus 40 ~~~~~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (309)
..||++||+|.+++|++|+++.++.|..|+..+..++++|+||||+|||++|+.+++++.++.....+.+++..+..+..
T Consensus 2 ~~pw~eKyrP~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~~ 81 (224)
T d1sxjb2 2 QLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGID 81 (224)
T ss_dssp CCCHHHHTCCSSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHH
T ss_pred CCchHhHhCCCCHHHhcCCHHHHHHHHHHHHcCCCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCCce
Confidence 36899999999999999999999999999999999999999999999999999999999887777889999999888887
Q ss_pred HHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcceeEEEecC
Q 021660 120 VVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAP 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~~i~~~~ 199 (309)
.+...+..+.......... ..+++++||+|.+....++.|+..++..+..+.++++++....+.+++++||..++|.+
T Consensus 82 ~i~~~~~~~~~~~~~~~~~--~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~~i~~~~ 159 (224)
T d1sxjb2 82 VVRNQIKHFAQKKLHLPPG--KHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSK 159 (224)
T ss_dssp HHHTHHHHHHHBCCCCCTT--CCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCC
T ss_pred ehhhHHHHHHHhhccCCCc--ceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHHHHhhhcc
Confidence 7777777766554432222 57899999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcCHHHHHhhhC
Q 021660 200 LEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTG 263 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~~~i~~~~v~~~~~ 263 (309)
|+.+++..++.++++++++.+++++++.|++.++||+|.+++.|+.+....+.++.+.|.+++.
T Consensus 160 ~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~Gd~R~ai~~Lq~~~~~~~~i~~~~i~~~~d 223 (224)
T d1sxjb2 160 LSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVD 223 (224)
T ss_dssp CCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSBCHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCcCHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999888778999999887764
No 2
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.3e-37 Score=250.60 Aligned_cols=220 Identities=55% Similarity=0.950 Sum_probs=195.8
Q ss_pred cChhhhcCCCCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHH
Q 021660 41 SPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDV 120 (309)
Q Consensus 41 ~~~~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (309)
.||+++|+|+++++++|++++++.|..|+..+..++++|+||||+|||++++.+++++.+......+.+.+.....+...
T Consensus 2 ~pw~ekyrP~~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~ 81 (227)
T d1sxjc2 2 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDV 81 (227)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHH
T ss_pred CchhhhhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeee
Confidence 58999999999999999999999999999999999999999999999999999999998777777788888887777666
Q ss_pred HHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcceeEEEecCC
Q 021660 121 VRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPL 200 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~~i~~~~~ 200 (309)
.............. .. .+.++++|||++.+....++.|+..++..+..+.++++++....+.+.+++||..+.|.++
T Consensus 82 ~~~~~~~~~~~~~~-~~--~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~i~~~~~ 158 (227)
T d1sxjc2 82 VRNQIKDFASTRQI-FS--KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPL 158 (227)
T ss_dssp HHTHHHHHHHBCCS-SS--CSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCC
T ss_pred eecchhhccccccc-cC--CCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHhhhccccc
Confidence 55555544433322 11 2567999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-----CCcCHHHHHhhhC
Q 021660 201 EPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS-----QQITEEAVYLCTG 263 (309)
Q Consensus 201 ~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~-----~~i~~~~v~~~~~ 263 (309)
+.+++..++.+.+..+++.+++++++.|++.+.||+|.+++.|+.+.... +.|+.++|+++++
T Consensus 159 ~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~Gd~R~ain~Lq~~~~~~~~~~~~~It~~~v~e~~g 226 (227)
T d1sxjc2 159 PQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCG 226 (227)
T ss_dssp CHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHTT
T ss_pred cccccccccccccccccccCCHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCCCCCeeCHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999876543 4689999998876
No 3
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=1.8e-36 Score=246.80 Aligned_cols=220 Identities=48% Similarity=0.855 Sum_probs=196.5
Q ss_pred CcChhhhcCCCCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchH
Q 021660 40 ASPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID 119 (309)
Q Consensus 40 ~~~~~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (309)
..||+++|+|.+++|++|++++++.+..|+..++.++++|+||||+|||++|+.+++++.++.....++++++....+..
T Consensus 11 ~~~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~~~~~~ 90 (231)
T d1iqpa2 11 EKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGIN 90 (231)
T ss_dssp TSCHHHHTCCCSTTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHH
T ss_pred hchHHHHhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCcccchh
Confidence 47899999999999999999999999999999999999999999999999999999999888788889999988766665
Q ss_pred HHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcceeEEEecC
Q 021660 120 VVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAP 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~~i~~~~ 199 (309)
.+............. ......++++||++.+....++.|+.+++.....+.+|++++....+++++.+||..+.|.+
T Consensus 91 ~~~~~~~~~~~~~~~---~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~~i~~~~ 167 (231)
T d1iqpa2 91 VIREKVKEFARTKPI---GGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRP 167 (231)
T ss_dssp TTHHHHHHHHHSCCG---GGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEEEEECCC
T ss_pred HHHHHHHHHHhhhhc---cCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCccccccccc
Confidence 555555544333222 12257899999999999999999999999998889999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcCHHHHHhhh
Q 021660 200 LEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCT 262 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~~~i~~~~v~~~~ 262 (309)
++..++..++++.+.++++.+++++++.|++.++||+|.+++.|+.+....+.++.++|....
T Consensus 168 ~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~gdiR~ai~~Lq~~~~~~~~it~e~v~~v~ 230 (231)
T d1iqpa2 168 LRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVA 230 (231)
T ss_dssp CCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSEECHHHHHHHT
T ss_pred cchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCcCHHHHHhhh
Confidence 999999999999999999999999999999999999999999999998888889999887653
No 4
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.5e-35 Score=237.91 Aligned_cols=216 Identities=24% Similarity=0.415 Sum_probs=188.4
Q ss_pred hhhhcCCCCccccccChHHHHHHHHHHhcCCCCe-EEEECCCCCcHHHHHHHHHHHHccCc-------------------
Q 021660 43 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPH-LLLYGPPGTGKTSTILAVARKLYGAQ------------------- 102 (309)
Q Consensus 43 ~~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~-~ll~G~~G~GKT~l~~~l~~~~~~~~------------------- 102 (309)
+++||||.+|++++|++++++.+..++..++.++ ++|+||||+|||++|+.+++.+.+..
T Consensus 2 ~~~KyrP~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (239)
T d1njfa_ 2 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 81 (239)
T ss_dssp HHHHTCCSSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHT
T ss_pred chhhhCCCCHHHccChHHHHHHHHHHHHcCCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcC
Confidence 6799999999999999999999999999998877 89999999999999999999986532
Q ss_pred ccccEEEEecCCCcchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc
Q 021660 103 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~ 182 (309)
....+.+++.....+.+.++..+..+.... ...+.+++||||+|.+..+.++.|++.|++++..+.||++|+...
T Consensus 82 ~~~~~~~~~~~~~~~i~~ir~~~~~~~~~~-----~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~tn~~~ 156 (239)
T d1njfa_ 82 RFVDLIEIDAASRTKVEDTRDLLDNVQYAP-----ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ 156 (239)
T ss_dssp CCTTEEEEETTCSSSHHHHHHHHHSCCCSC-----SSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGG
T ss_pred CCCeEEEecchhcCCHHHHHHHHHHHHhcc-----ccCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEEcCCcc
Confidence 123567888777677777766555443221 122568999999999999999999999999999999999999999
Q ss_pred ccchhhhcceeEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcCHHHHHhh
Q 021660 183 KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS-QQITEEAVYLC 261 (309)
Q Consensus 183 ~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~-~~i~~~~v~~~ 261 (309)
++.+++++||..+.|++++.+++.+++.+.+..++..+++++++.|++.++||+|.+++.|+.+...+ +.|+.++|.++
T Consensus 157 ~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~Gd~R~ain~l~~~~~~~~~~I~~~~v~~~ 236 (239)
T d1njfa_ 157 KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 236 (239)
T ss_dssp GSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTTSBCHHHHHHH
T ss_pred ccChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998755443 77999999888
Q ss_pred hC
Q 021660 262 TG 263 (309)
Q Consensus 262 ~~ 263 (309)
++
T Consensus 237 lg 238 (239)
T d1njfa_ 237 LG 238 (239)
T ss_dssp HT
T ss_pred hC
Confidence 75
No 5
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.4e-34 Score=234.17 Aligned_cols=222 Identities=44% Similarity=0.776 Sum_probs=187.4
Q ss_pred ChhhhcCCCCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCc-ccccEEEEecCCCcchHH
Q 021660 42 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ-YHNMILELNASDDRGIDV 120 (309)
Q Consensus 42 ~~~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 120 (309)
||+++|+|.++++++|+++.++.+..++.+++.++++|+||||+|||++++.+++++.+.. ........+.....+...
T Consensus 1 ~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
T d1sxjd2 1 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISI 80 (237)
T ss_dssp CHHHHTCCSSTTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHH
T ss_pred CcchhhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchH
Confidence 7999999999999999999999999999999989999999999999999999999974432 245566677766666555
Q ss_pred HHHHHHHhhhcccccc-------CCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhccee
Q 021660 121 VRQQIQDFASTQSFSF-------GVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCT 193 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~-------~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~ 193 (309)
....+........... .......+++|||++.+.....+.+...++..+..+.+|++++....+.+++.+||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~ 160 (237)
T d1sxjd2 81 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCS 160 (237)
T ss_dssp HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSE
T ss_pred HHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchhh
Confidence 5544544432221100 112246799999999999999999999999998888999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc------CCcCHHHHHhhhC
Q 021660 194 RFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS------QQITEEAVYLCTG 263 (309)
Q Consensus 194 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~------~~i~~~~v~~~~~ 263 (309)
.+.|.+++.+++..+|+.++.++++.+++++++.|++.++||+|.+++.|+.++... +.||.++|+++++
T Consensus 161 ~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~gd~R~ai~~L~~~~~~~~~~~~~~~It~~~i~e~~g 236 (237)
T d1sxjd2 161 KFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAG 236 (237)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHHT
T ss_pred hhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhcCCCCccCHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999998775432 4699999988765
No 6
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=3.2e-30 Score=212.29 Aligned_cols=208 Identities=32% Similarity=0.609 Sum_probs=161.1
Q ss_pred hhhhcCCCCccccccChHHHHHHHHHHhcCC-CCeEEEECCCCCcHHHHHHHHHHHHccCcccc----------------
Q 021660 43 WVEKYRPQSLADVAAHRDIVDTIDRLTSENR-LPHLLLYGPPGTGKTSTILAVARKLYGAQYHN---------------- 105 (309)
Q Consensus 43 ~~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~-~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~---------------- 105 (309)
|+|||+|.++++++|++++.+.+..++.... .++++|+||||+|||++|+++++.+.......
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL 80 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----------------
T ss_pred CCcccCCCCHHHccCcHHHHHHHHHHHHcCCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchh
Confidence 9999999999999999999999999987664 55699999999999999999999974432111
Q ss_pred --------cEEEEecCCC--cchHHHHHHHHHhhhccccc-----cCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcC
Q 021660 106 --------MILELNASDD--RGIDVVRQQIQDFASTQSFS-----FGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTK 170 (309)
Q Consensus 106 --------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~ 170 (309)
....+..... .........+.......... ........+++|||+|.+....++.|.+.++.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~ 160 (252)
T d1sxje2 81 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSK 160 (252)
T ss_dssp --CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTT
T ss_pred hhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccccccchhhhcccccccc
Confidence 1111111111 01111222222222111110 00112467999999999999999999999999998
Q ss_pred CceEEEEecCCcccchhhhcceeEEEecCCChHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 021660 171 NTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVT-EGGLAALVRLCNGDMRKALNILQSTHMA 249 (309)
Q Consensus 171 ~~~~i~~~~~~~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~i~~~~~g~~r~~~~~l~~~~~~ 249 (309)
++.||++|+....+++++++||..++|++|+.+++.+++..++..+++.++ +++++.|+..+.||+|.+++.||.++..
T Consensus 161 ~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s~Gd~R~ai~~Lq~~~~~ 240 (252)
T d1sxje2 161 NIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 240 (252)
T ss_dssp TEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHHHTTCHHHHHHHHTHHHHT
T ss_pred cccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCcHHHHHHHHHHcCCcHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999998775 6888999999999999999999988765
Q ss_pred c
Q 021660 250 S 250 (309)
Q Consensus 250 ~ 250 (309)
+
T Consensus 241 ~ 241 (252)
T d1sxje2 241 N 241 (252)
T ss_dssp T
T ss_pred C
Confidence 3
No 7
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=5.1e-30 Score=211.25 Aligned_cols=217 Identities=23% Similarity=0.401 Sum_probs=169.5
Q ss_pred cChhhhcCCCCccccccChHHHHHHHHHHhc-----------------CCCCeEEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 41 SPWVEKYRPQSLADVAAHRDIVDTIDRLTSE-----------------NRLPHLLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 41 ~~~~~~~~p~~~~~~ig~~~~~~~l~~~~~~-----------------~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
..|.++|+|.++++++|+++.++.|..++.. +..++++|+||||||||++|+++|+++
T Consensus 2 ~lW~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~----- 76 (253)
T d1sxja2 2 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL----- 76 (253)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHT-----
T ss_pred CccccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHH-----
Confidence 4699999999999999999999999998853 233569999999999999999999998
Q ss_pred cccEEEEecCCCcchHHHHHHHHHhhhccccc---------cCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHh-cCCce
Q 021660 104 HNMILELNASDDRGIDVVRQQIQDFASTQSFS---------FGVKASVKLVLLDEADAMTKDAQFALRRVIEKY-TKNTR 173 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~-~~~~~ 173 (309)
+..+..++.........+...+.......... ........++++||++.+....+..+..+++.. .....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (253)
T d1sxja2 77 GYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTP 156 (253)
T ss_dssp TCEEEEECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHHHCSSC
T ss_pred HhhhhccccccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccchhhhhHHHhhhhcccccc
Confidence 66778888877666655555444333322110 112235779999999999877666655555532 22345
Q ss_pred EEEEec-CCcccchhhhcceeEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q 021660 174 FALICN-QVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQ 252 (309)
Q Consensus 174 ~i~~~~-~~~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~~~ 252 (309)
++++++ ......+.+.+|+..++|.+|+.+++..+++.++.++++.+++++++.|++.++||+|.+++.|+.++...+.
T Consensus 157 ii~i~~~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~GDiR~ai~~L~~~~~~~~~ 236 (253)
T d1sxja2 157 LILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTKT 236 (253)
T ss_dssp EEEEESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTTCHHHHHHHHTHHHHHSSC
T ss_pred cccccccccccccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCC
Confidence 555554 3444566788999999999999999999999999999999999999999999999999999999998887777
Q ss_pred cCHHHHHhhh
Q 021660 253 ITEEAVYLCT 262 (309)
Q Consensus 253 i~~~~v~~~~ 262 (309)
++.+.+.+..
T Consensus 237 i~~~~~~~~~ 246 (253)
T d1sxja2 237 INHENINEIS 246 (253)
T ss_dssp CCTTHHHHHH
T ss_pred CCHHHHHHHh
Confidence 8877665443
No 8
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.96 E-value=2.1e-27 Score=193.61 Aligned_cols=200 Identities=17% Similarity=0.253 Sum_probs=165.0
Q ss_pred cCCCCccccccChHHHHHHHHHHh-----cCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHH
Q 021660 47 YRPQSLADVAAHRDIVDTIDRLTS-----ENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121 (309)
Q Consensus 47 ~~p~~~~~~ig~~~~~~~l~~~~~-----~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (309)
.||++|++++|++++++.+..|+. +...+++||+||||||||++|+.+++++ +..+..++.........+
T Consensus 3 ~RP~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~-----~~~~~~~~~~~~~~~~~~ 77 (238)
T d1in4a2 3 LRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL-----QTNIHVTSGPVLVKQGDM 77 (238)
T ss_dssp TSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH-----TCCEEEEETTTCCSHHHH
T ss_pred CCCCcHHHcCChHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCcHHHHHHHHHhcc-----CCCcccccCcccccHHHH
Confidence 689999999999999999998875 3345779999999999999999999998 566777777766555554
Q ss_pred HHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHh------------------cCCceEEEEecCCcc
Q 021660 122 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKY------------------TKNTRFALICNQVNK 183 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~------------------~~~~~~i~~~~~~~~ 183 (309)
...+... ..+.++++||++.+.+..++.+...++.. ...+++|++|+....
T Consensus 78 ~~~~~~~-----------~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~~~~ 146 (238)
T d1in4a2 78 AAILTSL-----------ERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGL 146 (238)
T ss_dssp HHHHHHC-----------CTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEEEESCGGG
T ss_pred HHHHHhh-----------ccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCCCcc
Confidence 4433321 14678999999999988888888887752 235678888999999
Q ss_pred cchhhhcce-eEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----cCCcCHHH
Q 021660 184 IIPALQSRC-TRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMA-----SQQITEEA 257 (309)
Q Consensus 184 l~~~l~~r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~-----~~~i~~~~ 257 (309)
..+.+++|| ..+.|++++.+++..+++..+..++..++++++..+++.+.||+|.+++.|+.+... .+.||.+.
T Consensus 147 ~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~gd~R~ai~~l~~~~~~~~~~~~~~it~~~ 226 (238)
T d1in4a2 147 LSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDI 226 (238)
T ss_dssp SCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHH
T ss_pred ccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCccCHHH
Confidence 999999998 668999999999999999999999999999999999999999999999999876432 25678777
Q ss_pred HHhhh
Q 021660 258 VYLCT 262 (309)
Q Consensus 258 v~~~~ 262 (309)
+.+++
T Consensus 227 ~~~al 231 (238)
T d1in4a2 227 VLKTM 231 (238)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76665
No 9
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.96 E-value=6e-27 Score=190.99 Aligned_cols=201 Identities=18% Similarity=0.244 Sum_probs=161.4
Q ss_pred cCCCCccccccChHHHHHHHHHHhc-----CCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHH
Q 021660 47 YRPQSLADVAAHRDIVDTIDRLTSE-----NRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121 (309)
Q Consensus 47 ~~p~~~~~~ig~~~~~~~l~~~~~~-----~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (309)
.||++|++++|++++++.+..++.. ...+++||+||||||||++|+.+++++ ...+...+..........
T Consensus 3 ~RP~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~-----~~~~~~~~~~~~~~~~~~ 77 (239)
T d1ixsb2 3 LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL-----GVNLRVTSGPAIEKPGDL 77 (239)
T ss_dssp CCCCSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHH-----TCCEEEEETTTCCSHHHH
T ss_pred cCCCCHHHhCCHHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHh-----CCCeEeccCCccccchhh
Confidence 4899999999999999999988753 245679999999999999999999998 666777777765544443
Q ss_pred HHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHh------------------cCCceEEEEecCCcc
Q 021660 122 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKY------------------TKNTRFALICNQVNK 183 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~------------------~~~~~~i~~~~~~~~ 183 (309)
...+.... ....++++||++.+.+..++.++..++.. ++..++|++++....
T Consensus 78 ~~~~~~~~----------~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 147 (239)
T d1ixsb2 78 AAILANSL----------EEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGL 147 (239)
T ss_dssp HHHHHTTC----------CTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCSS
T ss_pred HHHHHhhc----------cCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccCccc
Confidence 33333221 14579999999999999999999999852 234556666666554
Q ss_pred -cchhhhcceeEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-----CCcCHHH
Q 021660 184 -IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS-----QQITEEA 257 (309)
Q Consensus 184 -l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~-----~~i~~~~ 257 (309)
..+.+.+++..+.|.+++.+++..++...+..+++.++++.+..+++.+.||+|.+++.|+.+...+ +.||.+.
T Consensus 148 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~gd~R~a~~~l~~~~~~a~~~~~~~It~~~ 227 (239)
T d1ixsb2 148 ITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRER 227 (239)
T ss_dssp CSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTSSHHHHHHHHHHHHHHHTTSCCSCBCHHH
T ss_pred ccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCCcCHHH
Confidence 4456666779999999999999999999999999999999999999999999999999998875432 4588887
Q ss_pred HHhhh
Q 021660 258 VYLCT 262 (309)
Q Consensus 258 v~~~~ 262 (309)
+.+++
T Consensus 228 ~~~~l 232 (239)
T d1ixsb2 228 ALEAL 232 (239)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 10
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=3.8e-26 Score=181.28 Aligned_cols=177 Identities=25% Similarity=0.349 Sum_probs=146.6
Q ss_pred ChHHHHHHHHHHhcCCCCe-EEEECCCCCcHHHHHHHHHHHHccCc-------------------ccccEEEEecCC---
Q 021660 58 HRDIVDTIDRLTSENRLPH-LLLYGPPGTGKTSTILAVARKLYGAQ-------------------YHNMILELNASD--- 114 (309)
Q Consensus 58 ~~~~~~~l~~~~~~~~~~~-~ll~G~~G~GKT~l~~~l~~~~~~~~-------------------~~~~~~~~~~~~--- 114 (309)
+....+.+.+.+..++.++ ++|+||+|+|||++++.+++.+.+.. ....+..+....
T Consensus 7 ~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 86 (207)
T d1a5ta2 7 LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKN 86 (207)
T ss_dssp GHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTCS
T ss_pred cHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhccc
Confidence 5688999999999999888 99999999999999999999986432 233444554332
Q ss_pred CcchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcceeE
Q 021660 115 DRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTR 194 (309)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~~ 194 (309)
....+.++..+..+.... ...+.+++||||+|.+..+.++.|++.||+++.++.||++|+...++.+++++||..
T Consensus 87 ~i~~~~ir~l~~~~~~~~-----~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ll~tI~SRc~~ 161 (207)
T d1a5ta2 87 TLGVDAVREVTEKLNEHA-----RLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRL 161 (207)
T ss_dssp SBCHHHHHHHHHHTTSCC-----TTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGGSCHHHHTTSEE
T ss_pred ccccchhhHHhhhhhhcc-----ccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecChhhhhhhhcceeEE
Confidence 234556665555443221 122688999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHH
Q 021660 195 FRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQ 244 (309)
Q Consensus 195 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~ 244 (309)
+.|.+++.+++..+++. ...++++++..+++.++|++|.+++.||
T Consensus 162 i~~~~~~~~~~~~~L~~-----~~~~~~~~~~~i~~~s~Gs~r~al~~le 206 (207)
T d1a5ta2 162 HYLAPPPEQYAVTWLSR-----EVTMSQDALLAALRLSAGSPGAALALFQ 206 (207)
T ss_dssp EECCCCCHHHHHHHHHH-----HCCCCHHHHHHHHHHTTTCHHHHHHTTS
T ss_pred EecCCCCHHHHHHHHHH-----cCCCCHHHHHHHHHHcCCCHHHHHHHhC
Confidence 99999999999998864 4578999999999999999999998764
No 11
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.88 E-value=3.5e-22 Score=161.94 Aligned_cols=201 Identities=21% Similarity=0.264 Sum_probs=137.3
Q ss_pred CccccccChHHHHHHHHHHh-----------cCC-CCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcc-
Q 021660 51 SLADVAAHRDIVDTIDRLTS-----------ENR-LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRG- 117 (309)
Q Consensus 51 ~~~~~ig~~~~~~~l~~~~~-----------~~~-~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~- 117 (309)
+|++++|.+.+++.|.+.+. +.. +.++||+||||||||++|+++++++ +..++.+++.....
T Consensus 7 ~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~-----~~~~~~i~~~~l~~~ 81 (247)
T d1ixza_ 7 TFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA-----RVPFITASGSDFVEM 81 (247)
T ss_dssp CGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHT-----TCCEEEEEHHHHHHS
T ss_pred cHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHc-----CCCEEEEEhHHhhhc
Confidence 78999999999888776542 112 2349999999999999999999997 67777777654211
Q ss_pred -hHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHH--------------HHHHHHHHHHHhcC--CceEEEEecC
Q 021660 118 -IDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKD--------------AQFALRRVIEKYTK--NTRFALICNQ 180 (309)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~--------------~~~~l~~~l~~~~~--~~~~i~~~~~ 180 (309)
.....+.+....... ....+.||+|||+|.+... ..+.|+..|+.... .+.+|++||.
T Consensus 82 ~~g~~~~~l~~~f~~a-----~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~ 156 (247)
T d1ixza_ 82 FVGVGAARVRDLFETA-----KRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNR 156 (247)
T ss_dssp CTTHHHHHHHHHHHHH-----TTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEESC
T ss_pred cccHHHHHHHHHHHHH-----HHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCC
Confidence 111122233222211 1115789999999876321 23456666765433 4456668899
Q ss_pred Ccccchhhhc--ce-eEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcC-CHHHHHHHHHHHHhh-----cC
Q 021660 181 VNKIIPALQS--RC-TRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNG-DMRKALNILQSTHMA-----SQ 251 (309)
Q Consensus 181 ~~~l~~~l~~--r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g-~~r~~~~~l~~~~~~-----~~ 251 (309)
++.+++++++ || ..++|++|+.++..++++.++...... .+..++.+++.+.| ..+.+.++++.+... .+
T Consensus 157 ~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~-~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~~~ 235 (247)
T d1ixza_ 157 PDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLA-EDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRR 235 (247)
T ss_dssp GGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCS
T ss_pred ccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCc-cccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999985 78 789999999999999999988765543 33457889998876 333444444443322 25
Q ss_pred CcCHHHHHhhh
Q 021660 252 QITEEAVYLCT 262 (309)
Q Consensus 252 ~i~~~~v~~~~ 262 (309)
.|+.+++.+++
T Consensus 236 ~i~~~d~~~A~ 246 (247)
T d1ixza_ 236 KITMKDLEEAA 246 (247)
T ss_dssp SBCHHHHHHHT
T ss_pred CcCHHHHHHhh
Confidence 78888888775
No 12
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.88 E-value=2e-21 Score=158.08 Aligned_cols=200 Identities=19% Similarity=0.226 Sum_probs=140.0
Q ss_pred CCCCccccccChHHHHHHHHHHh-----------cC-CCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC
Q 021660 48 RPQSLADVAAHRDIVDTIDRLTS-----------EN-RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD 115 (309)
Q Consensus 48 ~p~~~~~~ig~~~~~~~l~~~~~-----------~~-~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~ 115 (309)
...+|+|++|.+..++.+.+.+. +. .+.++||+||||||||++|+.+|+++ +..++.+++...
T Consensus 7 ~~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~-----~~~~~~i~~~~l 81 (256)
T d1lv7a_ 7 IKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA-----KVPFFTISGSDF 81 (256)
T ss_dssp SCCCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHH-----TCCEEEECSCSS
T ss_pred CCCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHc-----CCCEEEEEhHHh
Confidence 34578999999999998876542 11 23349999999999999999999998 777888887653
Q ss_pred c------chHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCH-----------H---HHHHHHHHHHHhc--CCce
Q 021660 116 R------GIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTK-----------D---AQFALRRVIEKYT--KNTR 173 (309)
Q Consensus 116 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~-----------~---~~~~l~~~l~~~~--~~~~ 173 (309)
. ....+...+..... ..+.+|+|||+|.+.. . ..+.|+..++... ....
T Consensus 82 ~~~~~g~~~~~l~~~f~~A~~---------~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~ 152 (256)
T d1lv7a_ 82 VEMFVGVGASRVRDMFEQAKK---------AAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGII 152 (256)
T ss_dssp TTSCCCCCHHHHHHHHHHHHT---------TCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEE
T ss_pred hhcchhHHHHHHHHHHHHHHH---------cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEE
Confidence 2 22334444433321 1578999999987632 1 2355667776443 3456
Q ss_pred EEEEecCCcccchhhhc--ce-eEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcC-CHHHHHHHHHHHHhh
Q 021660 174 FALICNQVNKIIPALQS--RC-TRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNG-DMRKALNILQSTHMA 249 (309)
Q Consensus 174 ~i~~~~~~~~l~~~l~~--r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g-~~r~~~~~l~~~~~~ 249 (309)
+|++||.++.+++++++ || ..+.|++|+.++..++++.++.+.... .+..+..+++.+.| ..+.+.++++.+...
T Consensus 153 vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adi~~l~~~A~~~ 231 (256)
T d1lv7a_ 153 VIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLA-PDIDAAIIARGTPGFSGADLANLVNEAALF 231 (256)
T ss_dssp EEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcC-cccCHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 77788999999999986 78 889999999999999999888766544 34567888888876 344444445443322
Q ss_pred c-----CCcCHHHHHhhh
Q 021660 250 S-----QQITEEAVYLCT 262 (309)
Q Consensus 250 ~-----~~i~~~~v~~~~ 262 (309)
+ ..++.+++..++
T Consensus 232 a~~~~~~~i~~~d~~~Al 249 (256)
T d1lv7a_ 232 AARGNKRVVSMVEFEKAK 249 (256)
T ss_dssp HHHTTCSSBCHHHHHHHH
T ss_pred HHHcCCCccCHHHHHHHH
Confidence 1 357777776654
No 13
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.85 E-value=1.6e-20 Score=146.91 Aligned_cols=136 Identities=17% Similarity=0.225 Sum_probs=112.8
Q ss_pred HHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccC-cccccEEEEecCC-CcchHHHHHHHHHhhhccccccCC
Q 021660 61 IVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA-QYHNMILELNASD-DRGIDVVRQQIQDFASTQSFSFGV 138 (309)
Q Consensus 61 ~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 138 (309)
.++.+++++..+.+++++|+||+|+|||+++..+++.+... ....++..+.+.. ..+.+.++.....+...+.
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~I~Id~IR~i~~~~~~~~~----- 76 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPE----- 76 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHHHHHHHTSCCS-----
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCCCCHHHHHHHHHHHhhCcc-----
Confidence 36778899999888889999999999999999999987443 2345677777643 3577888876555443321
Q ss_pred CCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcceeEEEecCCC
Q 021660 139 KASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLE 201 (309)
Q Consensus 139 ~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~~i~~~~~~ 201 (309)
..+++|++|||+|.+..+++++|++.||+++.++.||++|+....+.+++++||+.+.|++|.
T Consensus 77 ~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p~ 139 (198)
T d2gnoa2 77 LYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPK 139 (198)
T ss_dssp SSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCH
T ss_pred cCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCch
Confidence 126789999999999999999999999999999999999999999999999999999997664
No 14
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1.4e-19 Score=148.01 Aligned_cols=182 Identities=20% Similarity=0.270 Sum_probs=127.4
Q ss_pred CccccccChHHHHHHHHHHh------------cCCC-CeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC--
Q 021660 51 SLADVAAHRDIVDTIDRLTS------------ENRL-PHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD-- 115 (309)
Q Consensus 51 ~~~~~ig~~~~~~~l~~~~~------------~~~~-~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~-- 115 (309)
.|++++|.+..++.+.+.+. +... ..+||+||||||||++++++++++ ...+..+++...
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~-----~~~~~~i~~~~l~~ 76 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET-----GAFFFLINGPEIMS 76 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHT-----TCEEEEECHHHHTT
T ss_pred ChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHh-----CCeEEEEEchhhcc
Confidence 58899999999999888753 1122 349999999999999999999997 677777775431
Q ss_pred ----cchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHH-----------HHHHHHHHHHh--cCCceEEEEe
Q 021660 116 ----RGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDA-----------QFALRRVIEKY--TKNTRFALIC 178 (309)
Q Consensus 116 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~-----------~~~l~~~l~~~--~~~~~~i~~~ 178 (309)
.....+...+...... .+.+|+|||+|.+.... ...++..+... .....+|++|
T Consensus 77 ~~~g~~~~~l~~~f~~A~~~---------~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tT 147 (258)
T d1e32a2 77 KLAGESESNLRKAFEEAEKN---------APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAAT 147 (258)
T ss_dssp SCTTHHHHHHHHHHHHHHHT---------CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhc---------CCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccEEEeC
Confidence 1122333333322211 57899999999986431 23344444432 2345677789
Q ss_pred cCCcccchhhhc--ce-eEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcC-CHHHHHHHHHHHH
Q 021660 179 NQVNKIIPALQS--RC-TRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNG-DMRKALNILQSTH 247 (309)
Q Consensus 179 ~~~~~l~~~l~~--r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g-~~r~~~~~l~~~~ 247 (309)
|.++.+++++++ || ..++|++|+.++...+++..++..... ++..++.|++.+.| ..+.+.++++.++
T Consensus 148 n~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adl~~lv~~A~ 219 (258)
T d1e32a2 148 NRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLA-DDVDLEQVANETHGHVGADLAALCSEAA 219 (258)
T ss_dssp SCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBC-TTCCHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred CCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCcccc-cccchhhhhhcccCCCHHHHHHHHHHHH
Confidence 999999999987 78 889999999999999999887654332 23357899999977 3444444544443
No 15
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.83 E-value=1.2e-18 Score=143.82 Aligned_cols=220 Identities=19% Similarity=0.245 Sum_probs=148.9
Q ss_pred CcChhhhcCCCCccccccChHHHHHHHHHHhc------CCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecC
Q 021660 40 ASPWVEKYRPQSLADVAAHRDIVDTIDRLTSE------NRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 113 (309)
Q Consensus 40 ~~~~~~~~~p~~~~~~ig~~~~~~~l~~~~~~------~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~ 113 (309)
..++...|.|. .++|++..++.+..++.. ..+++++|+||||||||++++.+++.+.... ...++.+++.
T Consensus 6 ~~~l~~~y~p~---~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~-~~~~~~~~~~ 81 (276)
T d1fnna2 6 DSVFSPSYVPK---RLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKT-TARFVYINGF 81 (276)
T ss_dssp GGGGSTTCCCS---CCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSC-CCEEEEEETT
T ss_pred cccCCCCCCCC---CCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHhccc-CCcEEEecch
Confidence 34577888885 468999888888777753 2345699999999999999999999985432 4455555554
Q ss_pred CCcchHHHHHHHHHhhhccccc---------------cCCCCccEEEEEeCCCCCCHHHHHHHHHHHHH---h-cCCceE
Q 021660 114 DDRGIDVVRQQIQDFASTQSFS---------------FGVKASVKLVLLDEADAMTKDAQFALRRVIEK---Y-TKNTRF 174 (309)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~---~-~~~~~~ 174 (309)
...................... ........++++|+++.+.......+..++.. . .....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T d1fnna2 82 IYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIAL 161 (276)
T ss_dssp TCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEE
T ss_pred hhhhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhccccccccceEE
Confidence 4332222211111111000000 00112466888999999887766655554442 2 234456
Q ss_pred EEEecCC---cccchhhhcce--eEEEecCCChHHHHHHHHHHHHHc--CCCCCHHHHHHHHHHh---------cCCHHH
Q 021660 175 ALICNQV---NKIIPALQSRC--TRFRFAPLEPVHVTERLKHVIEAE--GLDVTEGGLAALVRLC---------NGDMRK 238 (309)
Q Consensus 175 i~~~~~~---~~l~~~l~~r~--~~i~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~l~~i~~~~---------~g~~r~ 238 (309)
|++++.. ..+.+.+.+|+ ..+.|++++.+++.++++++++.. ...+++++++.+++.+ .||+|.
T Consensus 162 i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G~~R~ 241 (276)
T d1fnna2 162 VIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARL 241 (276)
T ss_dssp EEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHH
T ss_pred eecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcCCCHHH
Confidence 6666653 34566777776 668999999999999999998874 3458999999999875 699999
Q ss_pred HHHHHHHHHhhc-----CCcCHHHHHhhhC
Q 021660 239 ALNILQSTHMAS-----QQITEEAVYLCTG 263 (309)
Q Consensus 239 ~~~~l~~~~~~~-----~~i~~~~v~~~~~ 263 (309)
++++|+.+...+ ..|+.++|+++..
T Consensus 242 a~~ll~~a~~~A~~~~~~~I~~edv~~A~~ 271 (276)
T d1fnna2 242 AIDILYRSAYAAQQNGRKHIAPEDVRKSSK 271 (276)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCHHHHHHHHH
Confidence 999998876543 4789999887754
No 16
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.80 E-value=1.2e-18 Score=137.99 Aligned_cols=186 Identities=15% Similarity=0.232 Sum_probs=130.0
Q ss_pred Cccccc-c--ChHHHHHHHHHHhcCCCC--eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHH---
Q 021660 51 SLADVA-A--HRDIVDTIDRLTSENRLP--HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR--- 122 (309)
Q Consensus 51 ~~~~~i-g--~~~~~~~l~~~~~~~~~~--~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 122 (309)
+|++++ | +..+...+.+++...... .++|+||+|+|||+|++++++++...+....++............+.
T Consensus 8 tFdnF~vg~~N~~a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (213)
T d1l8qa2 8 TLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGT 87 (213)
T ss_dssp CSSSCCCCTTTHHHHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTC
T ss_pred ChhhccCCCcHHHHHHHHHHHHhCcCCCCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEechHHHHHHHHHHHHccc
Confidence 566765 4 566677778877654332 39999999999999999999998665554333321111100000000
Q ss_pred -HHHHHhhhccccccCCCCccEEEEEeCCCCCC--HHHHHHHHHHHHHhc-CCceEEEEecCCc----ccchhhhcce--
Q 021660 123 -QQIQDFASTQSFSFGVKASVKLVLLDEADAMT--KDAQFALRRVIEKYT-KNTRFALICNQVN----KIIPALQSRC-- 192 (309)
Q Consensus 123 -~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~--~~~~~~l~~~l~~~~-~~~~~i~~~~~~~----~l~~~l~~r~-- 192 (309)
..+..... ...+|+|||+|.+. +..+..|+.+++... ....+|++++..+ ...+.+.+|+
T Consensus 88 ~~~~~~~~~----------~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~ 157 (213)
T d1l8qa2 88 INEFRNMYK----------SVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEG 157 (213)
T ss_dssp HHHHHHHHH----------TCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHT
T ss_pred hhhHHHHHh----------hccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhC
Confidence 01111111 35799999999986 456778899988643 5667777775443 3567888885
Q ss_pred -eEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 021660 193 -TRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHM 248 (309)
Q Consensus 193 -~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~ 248 (309)
.++.++ |+.++..+++++++...|+.++++++++|++++ .++|.+...|..+.+
T Consensus 158 g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~-~~~R~L~~~l~~l~l 212 (213)
T d1l8qa2 158 GILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENT-KNVREIEGKIKLIKL 212 (213)
T ss_dssp SEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-SSHHHHHHHHHHHHH
T ss_pred ceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhc-CcHHHHHHHHHHhhc
Confidence 677785 677889999999999999999999999999998 589988888877653
No 17
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.79 E-value=6.8e-18 Score=140.10 Aligned_cols=221 Identities=18% Similarity=0.214 Sum_probs=140.1
Q ss_pred CcChhhhcCCCCccccccChHHHHHHHHHH----hcCCCC-----eEEEECCCCCcHHHHHHHHHHHHccCc----cccc
Q 021660 40 ASPWVEKYRPQSLADVAAHRDIVDTIDRLT----SENRLP-----HLLLYGPPGTGKTSTILAVARKLYGAQ----YHNM 106 (309)
Q Consensus 40 ~~~~~~~~~p~~~~~~ig~~~~~~~l~~~~----~~~~~~-----~~ll~G~~G~GKT~l~~~l~~~~~~~~----~~~~ 106 (309)
..+|.++|.|. .++|++..++.+..++ ..+..+ .++|+||||||||++++.+++++.... ....
T Consensus 6 ~~~l~~~~~P~---~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~ 82 (287)
T d1w5sa2 6 RRVFDENYIPP---ELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVK 82 (287)
T ss_dssp GGGGSTTCCCS---SCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred hhhcCCccCCC---CCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCce
Confidence 34577889885 4567777777666554 333222 267789999999999999999985322 2234
Q ss_pred EEEEecCCCcchHHHHHHHHHhhhccccc---------------cCCCCccEEEEEeCCCCCC------HHHHHHHHHHH
Q 021660 107 ILELNASDDRGIDVVRQQIQDFASTQSFS---------------FGVKASVKLVLLDEADAMT------KDAQFALRRVI 165 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~lliiDe~~~l~------~~~~~~l~~~l 165 (309)
+..+++....................... ........++++|+++.+. .+....+..++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~ 162 (287)
T d1w5sa2 83 QAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVH 162 (287)
T ss_dssp EEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHH
T ss_pred eeeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHHH
Confidence 44444433222211111111000000000 0011246688999988663 33445555555
Q ss_pred HHhc-----CCceEEEEecCCc------ccchhhhcce-eEEEecCCChHHHHHHHHHHHHHc--CCCCCHHHHHHHHHH
Q 021660 166 EKYT-----KNTRFALICNQVN------KIIPALQSRC-TRFRFAPLEPVHVTERLKHVIEAE--GLDVTEGGLAALVRL 231 (309)
Q Consensus 166 ~~~~-----~~~~~i~~~~~~~------~l~~~l~~r~-~~i~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~l~~i~~~ 231 (309)
+... ....+|++++... ...+.+.+|+ ..++|++++.+++.++++.+++.. ...+++++++.+++.
T Consensus 163 ~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~ 242 (287)
T d1w5sa2 163 EEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDV 242 (287)
T ss_dssp HHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHH
T ss_pred HhcchhhcccceeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHHH
Confidence 5432 2345566665443 2235566665 889999999999999999998764 345899999999998
Q ss_pred h------cCCHHHHHHHHHHHHhhc-----CCcCHHHHHhhhC
Q 021660 232 C------NGDMRKALNILQSTHMAS-----QQITEEAVYLCTG 263 (309)
Q Consensus 232 ~------~g~~r~~~~~l~~~~~~~-----~~i~~~~v~~~~~ 263 (309)
+ .|++|.++++|+.+...+ +.|+.++|++++.
T Consensus 243 ~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~ 285 (287)
T d1w5sa2 243 YGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVS 285 (287)
T ss_dssp HCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred HhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 7 699999999998776433 6799999988764
No 18
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=3.9e-19 Score=145.70 Aligned_cols=183 Identities=19% Similarity=0.248 Sum_probs=120.6
Q ss_pred CccccccChHHHHHHHHHHhc-----------C-C-CCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC--
Q 021660 51 SLADVAAHRDIVDTIDRLTSE-----------N-R-LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD-- 115 (309)
Q Consensus 51 ~~~~~ig~~~~~~~l~~~~~~-----------~-~-~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~-- 115 (309)
+|++++|.+++++.+.+.+.. + . ..++||+||||||||++++++|+++ +..++.+++...
T Consensus 5 ~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~-----~~~~~~~~~~~l~~ 79 (265)
T d1r7ra3 5 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISIKGPELLT 79 (265)
T ss_dssp SCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHT-----TCEEEEECHHHHHT
T ss_pred CHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHh-----CCcEEEEEHHHhhh
Confidence 789999988887777766421 2 1 2349999999999999999999998 677777765431
Q ss_pred ----cchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHH--------------HHHHHHHHHHHh--cCCceEE
Q 021660 116 ----RGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKD--------------AQFALRRVIEKY--TKNTRFA 175 (309)
Q Consensus 116 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~--------------~~~~l~~~l~~~--~~~~~~i 175 (309)
.....+...+...... .+.+|+|||+|.+... ..+.|+..++.. .....+|
T Consensus 80 ~~~~~~~~~l~~~f~~A~~~---------~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi 150 (265)
T d1r7ra3 80 MWFGESEANVREIFDKARQA---------APCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFII 150 (265)
T ss_dssp SCTTTHHHHHHHHHHHHHHT---------CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEE
T ss_pred ccccchHHHHHHHHHHHHhc---------CCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEE
Confidence 1122233333322211 5789999999988632 123444444332 2345677
Q ss_pred EEecCCcccchhhhc--ce-eEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcC-CHHHHHHHHHHHHh
Q 021660 176 LICNQVNKIIPALQS--RC-TRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNG-DMRKALNILQSTHM 248 (309)
Q Consensus 176 ~~~~~~~~l~~~l~~--r~-~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g-~~r~~~~~l~~~~~ 248 (309)
++||.++.+++++.+ || ..++|++|+.++..++++..++..... .+..+..+++.+.| +.+.+.++++.+..
T Consensus 151 ~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~-~~~~l~~la~~t~g~s~~di~~lv~~A~~ 226 (265)
T d1r7ra3 151 GATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFSGADLTEICQRACK 226 (265)
T ss_dssp ECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCCCHHHHHHHCSSCCHHHHHHHHHHHH
T ss_pred EeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCch-hhhhHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 788999999999976 77 789999999999999998776543221 22356788888765 33444444444433
No 19
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.77 E-value=2.5e-17 Score=133.45 Aligned_cols=201 Identities=13% Similarity=0.137 Sum_probs=144.3
Q ss_pred hhhhcCCCCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCc-----ccccEEEEecCCC--
Q 021660 43 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ-----YHNMILELNASDD-- 115 (309)
Q Consensus 43 ~~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~-----~~~~~~~~~~~~~-- 115 (309)
+++..+...++.++|+++.++.+...+......+++|.||||+|||++++.+++.+.... ....+..++....
T Consensus 8 lt~~a~~~~ld~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~lia 87 (268)
T d1r6bx2 8 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 87 (268)
T ss_dssp HHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---C
T ss_pred HHHHHHcCCCCcccChHHHHHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHhc
Confidence 555666777888999999999999999988888899999999999999999999985432 2334555554321
Q ss_pred --cchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHH-----HHHHHHHHHHHh--cCCceEEEEecC-----C
Q 021660 116 --RGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKD-----AQFALRRVIEKY--TKNTRFALICNQ-----V 181 (309)
Q Consensus 116 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~-----~~~~l~~~l~~~--~~~~~~i~~~~~-----~ 181 (309)
.....+.+.+......... .+..|++|||++.+... ....+.+++... .....+|.+|+. .
T Consensus 88 g~~~~g~~e~r~~~i~~~~~~-----~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIgatT~eey~~~ 162 (268)
T d1r6bx2 88 GTKYRGDFEKRFKALLKQLEQ-----DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI 162 (268)
T ss_dssp CCCCSSCHHHHHHHHHHHHSS-----SSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSCCCEEEEEECHHHHHCC
T ss_pred cCccchhHHHHHHHHHHHhhc-----cCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhCCCCeEEEeCCHHHHHHH
Confidence 1223444444444332211 15678999999998421 112334444322 235567776643 2
Q ss_pred cccchhhhcceeEEEecCCChHHHHHHHHHHHH----HcCCCCCHHHHHHHHHHhc------CCHHHHHHHHHHHHh
Q 021660 182 NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIE----AEGLDVTEGGLAALVRLCN------GDMRKALNILQSTHM 248 (309)
Q Consensus 182 ~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~l~~i~~~~~------g~~r~~~~~l~~~~~ 248 (309)
....++|.+||+.+.+.+|+.++...++..... .+++.++++++..+++.+. ..|.+++++|+.++.
T Consensus 163 ~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAIdllDea~a 239 (268)
T d1r6bx2 163 FEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 239 (268)
T ss_dssp CCCTTSSGGGEEEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHHHHHHH
T ss_pred HhhcHHHHhhhcccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHH
Confidence 345788999999999999999999999876443 4689999999999998873 679999999987764
No 20
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.71 E-value=7.9e-17 Score=137.70 Aligned_cols=200 Identities=15% Similarity=0.192 Sum_probs=136.6
Q ss_pred hhhcCCCCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCc-----ccccEEEEecCCCcch
Q 021660 44 VEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ-----YHNMILELNASDDRGI 118 (309)
Q Consensus 44 ~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~ 118 (309)
++..+-..++.++|++..++.+...+.+....+.+|.||||+|||+++..+|+.+.... .+..+..++.......
T Consensus 13 ~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag 92 (387)
T d1qvra2 13 TRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAG 92 (387)
T ss_dssp HHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC------
T ss_pred HHHHHcCCCCCCcCcHHHHHHHHHHHhcCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhcc
Confidence 34445667888999999999999999988888899999999999999999999875432 2345666665543221
Q ss_pred ----HHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCH--------HHHHHHHHHHHHhcCCceEEEEecCCc----
Q 021660 119 ----DVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTK--------DAQFALRRVIEKYTKNTRFALICNQVN---- 182 (309)
Q Consensus 119 ----~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~--------~~~~~l~~~l~~~~~~~~~i~~~~~~~---- 182 (309)
..+...+........ ...++.||+|||++.+.. +..+.|..+|.. ....+|.+|+...
T Consensus 93 ~~~~g~~e~r~~~i~~~~~----~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~r--g~~~~I~~tT~~ey~~~ 166 (387)
T d1qvra2 93 AKYRGEFEERLKAVIQEVV----QSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR--GELRLIGATTLDEYREI 166 (387)
T ss_dssp -----CHHHHHHHHHHHHH----TTCSSEEEEECCC-------------------HHHHHT--TCCCEEEEECHHHHHHH
T ss_pred cCcchhHHHHHHHHHHHhc----cCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhC--CCcceeeecCHHHHHHh
Confidence 233334433322211 111356899999999853 224566777764 3566777764221
Q ss_pred ccchhhhcceeEEEecCCChHHHHHHHHHHHHH----cCCCCCHHHHHHHHHHh------cCCHHHHHHHHHHHHhh
Q 021660 183 KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA----EGLDVTEGGLAALVRLC------NGDMRKALNILQSTHMA 249 (309)
Q Consensus 183 ~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~l~~i~~~~------~g~~r~~~~~l~~~~~~ 249 (309)
.-+++|.+||+.|.+.+|+.++...+|+....+ +++.++++++..+++.+ ..-|..++++|+.++..
T Consensus 167 e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a~a~ 243 (387)
T d1qvra2 167 EKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAAR 243 (387)
T ss_dssp TTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHHHHH
T ss_pred cccHHHHHhcccccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChhhHHHHHHHHHHH
Confidence 336789999999999999999999998876554 58999999999999987 36899999999887753
No 21
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.68 E-value=6.8e-16 Score=124.64 Aligned_cols=155 Identities=15% Similarity=0.208 Sum_probs=95.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCc---chHHHHHHHHHhhhccccccCCCCccEEEEEeCCCC
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDR---GIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADA 152 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~ 152 (309)
++||+||||||||++|+++|+++ +..++.+++.... ........+.+...... +..+.+|+|||+|.
T Consensus 42 ~vLL~GppGtGKT~la~alA~~~-----~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~-----~~~p~il~iDEid~ 111 (246)
T d1d2na_ 42 SVLLEGPPHSGKTALAAKIAEES-----NFPFIKICSPDKMIGFSETAKCQAMKKIFDDAY-----KSQLSCVVVDDIER 111 (246)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH-----TCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHH-----TSSEEEEEECCHHH
T ss_pred EEEEECcCCCCHHHHHHHHhhcc-----cccccccccccccccccccchhhhhhhhhhhhh-----hcccceeehhhhhh
Confidence 39999999999999999999998 6777887765321 11111122222221111 11578999999987
Q ss_pred CC----------HHHHHHHHHHHHHhcC---CceEEEEecCCcccchh-hhcce-eEEEecCCC-hHHHHHHHHHHHHHc
Q 021660 153 MT----------KDAQFALRRVIEKYTK---NTRFALICNQVNKIIPA-LQSRC-TRFRFAPLE-PVHVTERLKHVIEAE 216 (309)
Q Consensus 153 l~----------~~~~~~l~~~l~~~~~---~~~~i~~~~~~~~l~~~-l~~r~-~~i~~~~~~-~~~~~~~l~~~~~~~ 216 (309)
+. ....+.|+..++.... .+.+|++||.++.+++. +.+|| ..++++.++ .+++.+++.. .
T Consensus 112 l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~P~~~~r~~il~~l~~----~ 187 (246)
T d1d2na_ 112 LLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALEL----L 187 (246)
T ss_dssp HTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTTCTTTSSEEEECCCEEEHHHHHHHHHH----H
T ss_pred HhhhcccccchhHHHHHHHHHHhcCCCccccceeeeeccCChhhccchhhcCccceEEecCCchhHHHHHHHHHh----c
Confidence 63 2234556666665432 23566678887777654 66788 667775443 3344444432 2
Q ss_pred CCCCCHHHHHHHHHHhcC-----CHHHHHHHHHH
Q 021660 217 GLDVTEGGLAALVRLCNG-----DMRKALNILQS 245 (309)
Q Consensus 217 ~~~~~~~~l~~i~~~~~g-----~~r~~~~~l~~ 245 (309)
..++......+++.+.| .++.++..++.
T Consensus 188 -~~~~~~~~~~i~~~~~g~~~~~~ik~ll~~ie~ 220 (246)
T d1d2na_ 188 -GNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 220 (246)
T ss_dssp -TCSCHHHHHHHHHHHTTSEEEECHHHHHHHHHH
T ss_pred -cCCChHHHHHHHHHcCCCccchhHHHHHHHHHH
Confidence 25677777888888766 35555555443
No 22
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.65 E-value=5.1e-15 Score=119.42 Aligned_cols=205 Identities=18% Similarity=0.161 Sum_probs=137.0
Q ss_pred ccccChHHHHHHHHHHhcCC--CCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhc
Q 021660 54 DVAAHRDIVDTIDRLTSENR--LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFAST 131 (309)
Q Consensus 54 ~~ig~~~~~~~l~~~~~~~~--~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (309)
++||+...++.+.+.+.... ..+++|+|++||||+.+|+.+.... ......++.+++....... ..+.+......
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s--~~~~~~~~~~~~~~~~~~~-~~~~lfg~~~~ 77 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLS--DRSKEPFVALNVASIPRDI-FEAELFGYEKG 77 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHS--TTTTSCEEEEETTTSCHHH-HHHHHHCBCTT
T ss_pred CeEecCHHHHHHHHHHHHHhCCCCCEEEECCCCcCHHHHHHHHHHhc--CCcccccccchhhhhhhcc-cHHHhcCcccC
Confidence 57899888887777765431 2339999999999999999998753 3334566777776643322 22222211110
Q ss_pred cccc-------cCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhc-----------CCceEEEEecCCc-------ccch
Q 021660 132 QSFS-------FGVKASVKLVLLDEADAMTKDAQFALRRVIEKYT-----------KNTRFALICNQVN-------KIIP 186 (309)
Q Consensus 132 ~~~~-------~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~-----------~~~~~i~~~~~~~-------~l~~ 186 (309)
.... .-.+++++.|+|||++.++...+..|+.+++... .++++|++++... .+.+
T Consensus 78 ~~~~~~~~~~g~l~~a~gGtL~l~~i~~L~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l~~l~~~~~f~~ 157 (247)
T d1ny5a2 78 AFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFRE 157 (247)
T ss_dssp SSTTCCSCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCCSBEECCCEEEEEESSCHHHHHHTTSSCH
T ss_pred CcCCcccccCCHHHccCCCEEEEeChHhCCHHHHHHHHHHHHhCCEEECCCCCceecCeEEEEecCCCHHHHHHcCCCcH
Confidence 0000 0011245689999999999999999999998532 2456888776432 3455
Q ss_pred hhhcce--eEEEecCCC--hHHHHHHHHHHHH----HcCC---CCCHHHHHHHHHHh-cCCHHHHHHHHHHHHhhc--CC
Q 021660 187 ALQSRC--TRFRFAPLE--PVHVTERLKHVIE----AEGL---DVTEGGLAALVRLC-NGDMRKALNILQSTHMAS--QQ 252 (309)
Q Consensus 187 ~l~~r~--~~i~~~~~~--~~~~~~~l~~~~~----~~~~---~~~~~~l~~i~~~~-~g~~r~~~~~l~~~~~~~--~~ 252 (309)
.+..|+ ..+.++|+. .+++..++...+. +.+. .+++++++.+..+. +||++.+.+.++.+...+ +.
T Consensus 158 ~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl~EL~~~l~~a~~~~~~~~ 237 (247)
T d1ny5a2 158 DLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKF 237 (247)
T ss_dssp HHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHHHHHHHHHHHHHCCSSE
T ss_pred HHHhhcCeeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 666665 557777775 3567655555444 4443 37899999998875 899999999999888765 46
Q ss_pred cCHHHHHhh
Q 021660 253 ITEEAVYLC 261 (309)
Q Consensus 253 i~~~~v~~~ 261 (309)
|+.+++-.+
T Consensus 238 I~~~dl~~l 246 (247)
T d1ny5a2 238 IDRGELSCL 246 (247)
T ss_dssp ECHHHHHHH
T ss_pred ECHHHcccc
Confidence 888887654
No 23
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.64 E-value=6.8e-16 Score=129.09 Aligned_cols=152 Identities=20% Similarity=0.275 Sum_probs=97.4
Q ss_pred ccccChHHHHHHHHHHhc--------------CCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCc---
Q 021660 54 DVAAHRDIVDTIDRLTSE--------------NRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDR--- 116 (309)
Q Consensus 54 ~~ig~~~~~~~l~~~~~~--------------~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~--- 116 (309)
.++||+++++.+...+.+ .++.++||+||||||||.+|+++|+.+ ...++.++.+...
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~-----~~~~~~i~~s~~~~~~ 89 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA-----NAPFIKVEATKFTEVG 89 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHH-----TCCEEEEEGGGGSSCC
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhcc-----ccchhcccccccccce
Confidence 479999999988776621 134559999999999999999999998 5566666654321
Q ss_pred -chHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHH------------HHHHHHHHHHHhc----------CCce
Q 021660 117 -GIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKD------------AQFALRRVIEKYT----------KNTR 173 (309)
Q Consensus 117 -~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~------------~~~~l~~~l~~~~----------~~~~ 173 (309)
......+.+................++||+|||+|++.+. ..+.|+..++... .+..
T Consensus 90 ~~~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~il 169 (309)
T d1ofha_ 90 YVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHIL 169 (309)
T ss_dssp SGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCE
T ss_pred eEeeeccccccccchhhhcccccccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEecCCeEEEcccee
Confidence 1111112222222111110000113689999999998632 3455777777421 1223
Q ss_pred EEEEe----cCCcccchhhhcce-eEEEecCCChHHHHHHHH
Q 021660 174 FALIC----NQVNKIIPALQSRC-TRFRFAPLEPVHVTERLK 210 (309)
Q Consensus 174 ~i~~~----~~~~~l~~~l~~r~-~~i~~~~~~~~~~~~~l~ 210 (309)
+|++. +.+..+.+.+..|+ ..+.|.+|+..++.+++.
T Consensus 170 fi~~ga~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~ 211 (309)
T d1ofha_ 170 FIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILT 211 (309)
T ss_dssp EEEEECCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred EEeccchhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHH
Confidence 33332 45567788999999 779999999999988864
No 24
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.62 E-value=4.2e-16 Score=119.28 Aligned_cols=160 Identities=14% Similarity=0.174 Sum_probs=114.1
Q ss_pred hhhcCCCCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCc-----ccccEEEEecCC----
Q 021660 44 VEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ-----YHNMILELNASD---- 114 (309)
Q Consensus 44 ~~~~~p~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~-----~~~~~~~~~~~~---- 114 (309)
+++.+...++.++|++..++.+...+......+++|.||||+|||++++.+|+.+.... .+..++.++...
T Consensus 13 t~~a~~g~ld~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~LiAg 92 (195)
T d1jbka_ 13 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAG 92 (195)
T ss_dssp HHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHTT
T ss_pred HHHHHcCCCCCCcCcHHHHHHHHHHHhccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHHHhcc
Confidence 44556667888999999999999999988888899999999999999999999885432 244566666442
Q ss_pred CcchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHH--------HHHHHHHHHHHhcCCceEEEEecCC-----
Q 021660 115 DRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKD--------AQFALRRVIEKYTKNTRFALICNQV----- 181 (309)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~--------~~~~l~~~l~~~~~~~~~i~~~~~~----- 181 (309)
......+.+.+......... ..+..||+|||++.+... ..+.|..+|.. ....+|.+|+..
T Consensus 93 ~~~rG~~E~rl~~il~e~~~----~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~r--g~l~~IgatT~eey~~~ 166 (195)
T d1jbka_ 93 AKYRGEFEERLKGVLNDLAK----QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR--GELHCVGATTLDEYRQY 166 (195)
T ss_dssp TCSHHHHHHHHHHHHHHHHH----STTTEEEEEETGGGGTT------CCCCHHHHHHHHHT--TSCCEEEEECHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHhc----CCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHhC--CCceEEecCCHHHHHHH
Confidence 12223455555444432111 113579999999988532 23677777774 356677776432
Q ss_pred cccchhhhcceeEEEecCCChHHHHHHH
Q 021660 182 NKIIPALQSRCTRFRFAPLEPVHVTERL 209 (309)
Q Consensus 182 ~~l~~~l~~r~~~i~~~~~~~~~~~~~l 209 (309)
..-.++|.+||+.+.+.+|+.++...+|
T Consensus 167 ~e~d~aL~rrF~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 167 IEKDAALERRFQKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp TTTCHHHHTTEEEEECCCCCHHHHHTTC
T ss_pred HHcCHHHHhcCCEeecCCCCHHHHHHHh
Confidence 2457899999999999999998877654
No 25
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.60 E-value=2.9e-14 Score=119.22 Aligned_cols=168 Identities=18% Similarity=0.237 Sum_probs=117.7
Q ss_pred ccccccChHHHHHHHHHHhc--------CCCC-eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcc-----
Q 021660 52 LADVAAHRDIVDTIDRLTSE--------NRLP-HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRG----- 117 (309)
Q Consensus 52 ~~~~ig~~~~~~~l~~~~~~--------~~~~-~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~----- 117 (309)
-..++||+++++.+...+.. .++. .++|+||+|+|||.+|+.+++.+ ...++.++++....
T Consensus 21 ~~~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l-----~~~~i~~d~s~~~~~~~~~ 95 (315)
T d1r6bx3 21 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-----GIELLRFDMSEYMERHTVS 95 (315)
T ss_dssp TTTSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHH-----TCEEEEEEGGGCSSSSCCS
T ss_pred CCeecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhc-----cCCeeEeccccccchhhhh
Confidence 35689999999988776631 1222 49999999999999999999998 45566666543210
Q ss_pred ---------h-HHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHh-----------cCCceEEE
Q 021660 118 ---------I-DVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKY-----------TKNTRFAL 176 (309)
Q Consensus 118 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~-----------~~~~~~i~ 176 (309)
. ......+...... ....++++||++++.++.++.|++++++- -.++.+|+
T Consensus 96 ~l~g~~~gy~g~~~~~~l~~~~~~--------~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~ 167 (315)
T d1r6bx3 96 RLIGAPPGYVGFDQGGLLTDAVIK--------HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 167 (315)
T ss_dssp SSCCCCSCSHHHHHTTHHHHHHHH--------CSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTEEEECTTEEEEE
T ss_pred hhcccCCCccccccCChhhHHHHh--------CccchhhhcccccccchHhhhhHHhhccceecCCCCCccCccceEEEe
Confidence 0 0000111111111 14689999999999999999999999862 23556777
Q ss_pred EecCC-------------------------cccchhhhcce-eEEEecCCChHHHHHHHHHHHHH-------cC--CCCC
Q 021660 177 ICNQV-------------------------NKIIPALQSRC-TRFRFAPLEPVHVTERLKHVIEA-------EG--LDVT 221 (309)
Q Consensus 177 ~~~~~-------------------------~~l~~~l~~r~-~~i~~~~~~~~~~~~~l~~~~~~-------~~--~~~~ 221 (309)
++|-. ..+.+.+..|+ .++.|.|++.+++..++...+.+ .+ +.++
T Consensus 168 Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i~l~~~ 247 (315)
T d1r6bx3 168 TTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 247 (315)
T ss_dssp EECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred ccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHhcCcchhhH
Confidence 77522 12456788898 78999999999998886665543 23 3578
Q ss_pred HHHHHHHHHHh
Q 021660 222 EGGLAALVRLC 232 (309)
Q Consensus 222 ~~~l~~i~~~~ 232 (309)
+++++.|++..
T Consensus 248 ~~a~~~l~~~~ 258 (315)
T d1r6bx3 248 QEARNWLAEKG 258 (315)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 26
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.57 E-value=3.9e-14 Score=118.14 Aligned_cols=170 Identities=18% Similarity=0.286 Sum_probs=117.2
Q ss_pred cccccChHHHHHHHHHHhc-------C-CCC-eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHH--
Q 021660 53 ADVAAHRDIVDTIDRLTSE-------N-RLP-HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV-- 121 (309)
Q Consensus 53 ~~~ig~~~~~~~l~~~~~~-------~-~~~-~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 121 (309)
..++||+++++.+.+.+.. . ++. .++|+||+|+|||.+|+.+++.+.+. ...++.++.........+
T Consensus 23 ~~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~--~~~~~~~~~~~~~~~~~~~~ 100 (315)
T d1qvra3 23 KRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT--EEAMIRIDMTEYMEKHAVSR 100 (315)
T ss_dssp HHSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS--GGGEEEECTTTCCSSGGGGG
T ss_pred CeEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCC--CcceEEEeccccccchhhhh
Confidence 4689999999987766542 1 222 38999999999999999999998533 345566655432211110
Q ss_pred -------------HHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHh-----------cCCceEEEE
Q 021660 122 -------------RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKY-----------TKNTRFALI 177 (309)
Q Consensus 122 -------------~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~-----------~~~~~~i~~ 177 (309)
...+...... ...+||++||+|++.++.++.|+.++++- ..++.+|++
T Consensus 101 L~g~~~gyvG~~~~~~l~~~~~~--------~p~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~t 172 (315)
T d1qvra3 101 LIGAPPGYVGYEEGGQLTEAVRR--------RPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILT 172 (315)
T ss_dssp C--------------CHHHHHHH--------CSSEEEEESSGGGSCHHHHHHHHHHHTTTEECCSSSCCEECTTEEEEEE
T ss_pred hcCCCCCCcCcccCChHHHHHHh--------CCCcEEEEehHhhcCHHHHHHHHHHhccCceeCCCCcEecCcceEEEEe
Confidence 0111111111 14689999999999999999999999862 134566777
Q ss_pred ecCC--------------------------cccchhhhcce-eEEEecCCChHHHHHHHHHHHHH-------cC--CCCC
Q 021660 178 CNQV--------------------------NKIIPALQSRC-TRFRFAPLEPVHVTERLKHVIEA-------EG--LDVT 221 (309)
Q Consensus 178 ~~~~--------------------------~~l~~~l~~r~-~~i~~~~~~~~~~~~~l~~~~~~-------~~--~~~~ 221 (309)
+|-. ..+.+.+.+|+ .++.|.+++.+++.+++...+.+ .+ +.++
T Consensus 173 snlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~i~l~i~ 252 (315)
T d1qvra3 173 SNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELT 252 (315)
T ss_dssp CCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred cccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHHHHHHHHhcccccccc
Confidence 7631 23567888898 67789999999999887654443 23 3578
Q ss_pred HHHHHHHHHHh
Q 021660 222 EGGLAALVRLC 232 (309)
Q Consensus 222 ~~~l~~i~~~~ 232 (309)
+++++.|++.+
T Consensus 253 ~~~~~~L~~~~ 263 (315)
T d1qvra3 253 EAAKDFLAERG 263 (315)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 27
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.57 E-value=5.6e-14 Score=118.87 Aligned_cols=210 Identities=15% Similarity=0.171 Sum_probs=123.3
Q ss_pred CccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccC------------------cc---------
Q 021660 51 SLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA------------------QY--------- 103 (309)
Q Consensus 51 ~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~------------------~~--------- 103 (309)
.|.+++||+.++..+.-.+......|+||.||||||||++++.++.-+..- ..
T Consensus 5 ~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (333)
T d1g8pa_ 5 PFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIR 84 (333)
T ss_dssp CGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCTTCCCSCCCEEE
T ss_pred ChhhccCcHHHHHHHHHHHhccCCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccccccchhhccccCccc
Confidence 589999999999877655543333579999999999999999999876100 00
Q ss_pred -cccEEEEecCCCcchHHH------HHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHh--------
Q 021660 104 -HNMILELNASDDRGIDVV------RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKY-------- 168 (309)
Q Consensus 104 -~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~-------- 168 (309)
...+..... ......+ ...+..-........-..++++++++||++.+.++.++.|++.|++.
T Consensus 85 ~~~~~~~~~~--~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~me~~~v~i~r~g 162 (333)
T d1g8pa_ 85 KPTPVVDLPL--GVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDG 162 (333)
T ss_dssp ECCCEEEECT--TCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHHHSEEEECCTT
T ss_pred ccCceeeccC--CCCcccccCcchhhhccccCcceeeccccccccccEeecccHHHHHHHHHHHHhhhhcCCeEEecccC
Confidence 001111111 1111111 11111111110000001125789999999999999999999999963
Q ss_pred -----cCCceEEEEecCC-cccchhhhcce-eEEEecCCCh-HHHHHHHHHH----------------------------
Q 021660 169 -----TKNTRFALICNQV-NKIIPALQSRC-TRFRFAPLEP-VHVTERLKHV---------------------------- 212 (309)
Q Consensus 169 -----~~~~~~i~~~~~~-~~l~~~l~~r~-~~i~~~~~~~-~~~~~~l~~~---------------------------- 212 (309)
+....++.++|.. ..+.+++.+|| ..+.+..+.. .+..+++...
T Consensus 163 ~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T d1g8pa_ 163 LSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEA 242 (333)
T ss_dssp CCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHHH
Confidence 2344555566654 46888999999 5577765543 2222221111
Q ss_pred -HHHcCCCCCHHHHHHHHHHh---cC-CHHHHHHHHHHHHhh-----cCCcCHHHHHhhh
Q 021660 213 -IEAEGLDVTEGGLAALVRLC---NG-DMRKALNILQSTHMA-----SQQITEEAVYLCT 262 (309)
Q Consensus 213 -~~~~~~~~~~~~l~~i~~~~---~g-~~r~~~~~l~~~~~~-----~~~i~~~~v~~~~ 262 (309)
..-..+.++++....++... +. .+|....+++.+... .+.++.++|.+++
T Consensus 243 ~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~gr~~V~~~di~~a~ 302 (333)
T d1g8pa_ 243 RERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVA 302 (333)
T ss_dssp HHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHH
T ss_pred hhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Confidence 01113456666666665544 22 678777777544332 2679999988754
No 28
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.54 E-value=1.2e-13 Score=117.15 Aligned_cols=174 Identities=19% Similarity=0.228 Sum_probs=111.2
Q ss_pred cccccChHHHHHHHHHHh------------------------------cCCCCeEEEECCCCCcHHHHHHHHHHHHccCc
Q 021660 53 ADVAAHRDIVDTIDRLTS------------------------------ENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ 102 (309)
Q Consensus 53 ~~~ig~~~~~~~l~~~~~------------------------------~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~ 102 (309)
..+|||+++++.+..++. .....++||.||+|||||.+|+.+|+.+
T Consensus 17 ~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~---- 92 (364)
T d1um8a_ 17 NYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHL---- 92 (364)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHT----
T ss_pred CeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhc----
Confidence 358999999998876552 2244569999999999999999999986
Q ss_pred ccccEEEEecCCCcch----HHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCC--------------HHHHHHHHHH
Q 021660 103 YHNMILELNASDDRGI----DVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMT--------------KDAQFALRRV 164 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~--------------~~~~~~l~~~ 164 (309)
...++.++++..... ......+..+....+. .-....++++++||+++.. +..++.|+++
T Consensus 93 -~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~-~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqi 170 (364)
T d1um8a_ 93 -DIPIAISDATSLTEAGYVGEDVENILTRLLQASDW-NVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKI 170 (364)
T ss_dssp -TCCEEEEEGGGCC--------CTHHHHHHHHHTTT-CHHHHTTSEEEEETGGGC--------------CHHHHHHHHHH
T ss_pred -ccceeehhhhhcccchhhHhhhccchhhhhhhchh-HHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhhh
Confidence 556666666543221 1111222222222111 1111257899999999843 4568899999
Q ss_pred HHHhc-------------CCceEEEEecC-------------------------------------------------Cc
Q 021660 165 IEKYT-------------KNTRFALICNQ-------------------------------------------------VN 182 (309)
Q Consensus 165 l~~~~-------------~~~~~i~~~~~-------------------------------------------------~~ 182 (309)
++... .+..++.+++- ..
T Consensus 171 ld~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T d1um8a_ 171 VEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTY 250 (364)
T ss_dssp HHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHT
T ss_pred hcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhh
Confidence 99411 11112212110 01
Q ss_pred ccchhhhcce-eEEEecCCChHHHHHHHHH-----------HHHHcCC--CCCHHHHHHHHHHh
Q 021660 183 KIIPALQSRC-TRFRFAPLEPVHVTERLKH-----------VIEAEGL--DVTEGGLAALVRLC 232 (309)
Q Consensus 183 ~l~~~l~~r~-~~i~~~~~~~~~~~~~l~~-----------~~~~~~~--~~~~~~l~~i~~~~ 232 (309)
.+.|.+..|+ .++.|.+++.+++.+++.. .++.+|+ .+++++++.|++.+
T Consensus 251 ~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g 314 (364)
T d1um8a_ 251 GLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLA 314 (364)
T ss_dssp TCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHH
T ss_pred hhHHHHHHHhcchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhc
Confidence 2456788888 7899999999999998852 2334465 46899999999975
No 29
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.41 E-value=2.3e-12 Score=105.76 Aligned_cols=187 Identities=16% Similarity=0.146 Sum_probs=110.9
Q ss_pred CCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCC---CcchHHHHHHHH
Q 021660 50 QSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASD---DRGIDVVRQQIQ 126 (309)
Q Consensus 50 ~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 126 (309)
.+.++|+|+++.++.+.+. ..+.++|+||+|+|||++++.+++.+... ..++.+.... ......+...+.
T Consensus 9 ~~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (283)
T d2fnaa2 9 DNRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINELNLP---YIYLDLRKFEERNYISYKDFLLELQ 81 (283)
T ss_dssp CSGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHHTCC---EEEEEGGGGTTCSCCCHHHHHHHHH
T ss_pred CChhhCCChHHHHHHHHhc----cCCEEEEEcCCCCcHHHHHHHHHHHCCCC---eEEEEeccccccccccHHHHHHHHH
Confidence 3578999999999988764 33569999999999999999999987221 1122211111 111111111111
Q ss_pred Hhhh----cc-------cc-----------c------------------cCCCCccEEEEEeCCCCCCHHH----HHHHH
Q 021660 127 DFAS----TQ-------SF-----------S------------------FGVKASVKLVLLDEADAMTKDA----QFALR 162 (309)
Q Consensus 127 ~~~~----~~-------~~-----------~------------------~~~~~~~~lliiDe~~~l~~~~----~~~l~ 162 (309)
.... .. .. . ......+.++++||++.+.... ...+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~~~~~l~ 161 (283)
T d2fnaa2 82 KEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNLLPALA 161 (283)
T ss_dssp HHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCCHHHHH
T ss_pred HHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcccchHHHHHHHH
Confidence 1000 00 00 0 0011256789999998775433 23333
Q ss_pred HHHHHhcCCceEEEEecCCccc---------c-hhhhcceeEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHh
Q 021660 163 RVIEKYTKNTRFALICNQVNKI---------I-PALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLC 232 (309)
Q Consensus 163 ~~l~~~~~~~~~i~~~~~~~~l---------~-~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~ 232 (309)
.+.... .....++++.....+ . +...+++..+.+.+++.++..+++.+.+...++.. +.++.+.+.+
T Consensus 162 ~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~--~~~~~i~~~~ 238 (283)
T d2fnaa2 162 YAYDNL-KRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDF--KDYEVVYEKI 238 (283)
T ss_dssp HHHHHC-TTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCC--CCHHHHHHHH
T ss_pred HHHHhh-hhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCCCH--HHHHHHHHHh
Confidence 333332 345555555432211 1 11223357799999999999999999988877654 4478999999
Q ss_pred cCCHHHHHHHHHHH
Q 021660 233 NGDMRKALNILQST 246 (309)
Q Consensus 233 ~g~~r~~~~~l~~~ 246 (309)
+|.|..+......+
T Consensus 239 ~G~P~~L~~~~~~~ 252 (283)
T d2fnaa2 239 GGIPGWLTYFGFIY 252 (283)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99998655444433
No 30
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.24 E-value=1.7e-11 Score=101.08 Aligned_cols=124 Identities=13% Similarity=0.113 Sum_probs=74.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcc--hHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCC
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRG--IDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMT 154 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~ 154 (309)
+||+||||||||.+|+++|.++. ....++.++.+...+ .....+.++....... .+.||+|||+|.+.
T Consensus 126 ~l~~G~pG~GKT~la~ala~~~~---~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~-------~~~ilf~DEid~~~ 195 (321)
T d1w44a_ 126 VIVTGKGNSGKTPLVHALGEALG---GKDKYATVRFGEPLSGYNTDFNVFVDDIARAML-------QHRVIVIDSLKNVI 195 (321)
T ss_dssp EEEECSSSSCHHHHHHHHHHHHH---TTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHH-------HCSEEEEECCTTTC
T ss_pred EEEECCCCccHHHHHHHHHHHhc---CCCCeEEEEhhHhhhcccchHHHHHHHHHHHHh-------hccEEEeehhhhhc
Confidence 67799999999999999999983 234556666654321 1122223333322211 25699999999986
Q ss_pred HH------------HHHHHHHHHHHh--cCCceEEEEecCCcccchhh----h--cce-eEEEecCCChHHHHHHHHH
Q 021660 155 KD------------AQFALRRVIEKY--TKNTRFALICNQVNKIIPAL----Q--SRC-TRFRFAPLEPVHVTERLKH 211 (309)
Q Consensus 155 ~~------------~~~~l~~~l~~~--~~~~~~i~~~~~~~~l~~~l----~--~r~-~~i~~~~~~~~~~~~~l~~ 211 (309)
.. ..+.|+.-|+.. ...+.+|.+||. ..+++++ . .|| ..+.+.+|+.++..+++..
T Consensus 196 ~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~-~~~~~~i~~~~~r~~Rf~~~v~v~~pd~~~r~~il~~ 272 (321)
T d1w44a_ 196 GAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNP-TSNDDKIVELVKEASRSNSTSLVISTDVDGEWQVLTR 272 (321)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHTCEEEEECCC-CCCCHHHHHHHHHHHHHSCSEEEEECSSTTEEEEEEE
T ss_pred cccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCC-cccccchhhhhhccCcccceeecCCCChHHHHHHHHH
Confidence 32 234555555532 335677777774 3333333 2 355 6788888888777666653
No 31
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.21 E-value=2.7e-13 Score=114.85 Aligned_cols=148 Identities=18% Similarity=0.143 Sum_probs=84.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTK 155 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~ 155 (309)
.++|+||||||||+++..+++.+ +..++.++.++..+...+ .... ...+.++|+++....
T Consensus 156 ~~~~~g~~~~gk~~~~~~~~~~~-----~~~~i~in~s~~rs~~~l----~~~~-----------~~~~~l~d~~~~~~~ 215 (362)
T d1svma_ 156 YWLFKGPIDSGKTTLAAALLELC-----GGKALNVNLPLDRLNFEL----GVAI-----------DQFLVVFEDVKGTGG 215 (362)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH-----CCEEECCSSCTTTHHHHH----GGGT-----------TCSCEEETTCCCSTT
T ss_pred eEEEECCCCCCHHHHHHHHHHHc-----CCCEEEEECcchhhHHHH----HhHH-----------HHHHHHHHHHHHhhh
Confidence 49999999999999999999998 667777777765433221 1111 122344555433210
Q ss_pred -----------HHHHHHHHHHHHhc--------------CCceEEEEecCCcccchhhhcce-eEEEecCCC-hHHHHHH
Q 021660 156 -----------DAQFALRRVIEKYT--------------KNTRFALICNQVNKIIPALQSRC-TRFRFAPLE-PVHVTER 208 (309)
Q Consensus 156 -----------~~~~~l~~~l~~~~--------------~~~~~i~~~~~~~~l~~~l~~r~-~~i~~~~~~-~~~~~~~ 208 (309)
+..+.|...++... ..+++|++||..... .....|+ ..+.+.+++ ......+
T Consensus 216 ~~~~~~~~~~~DeiD~l~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~~~-~~r~~Rf~~~i~~~~~~~~~~~~~~ 294 (362)
T d1svma_ 216 ESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSVP-KTLQARFVKQIDFRPKDYLKHCLER 294 (362)
T ss_dssp TTTTCCCCSHHHHHHTTHHHHHCSSCEEECCSSSCCEEECCCCEEEEECSCCCC-HHHHTTEEEEEECCCCHHHHHHHHT
T ss_pred hccCCCCeEEEehHhhcccccCCcchhhhhhhhhchhhhccCCceeeccccccc-ccccccCceEEeecCCCcHHHHHHH
Confidence 11122233333210 123578888865322 1223466 344444443 3344466
Q ss_pred HHHHHHHcCCCCCHHHHHHHH-HHhcCCHHHHHHHHH
Q 021660 209 LKHVIEAEGLDVTEGGLAALV-RLCNGDMRKALNILQ 244 (309)
Q Consensus 209 l~~~~~~~~~~~~~~~l~~i~-~~~~g~~r~~~~~l~ 244 (309)
+...++.+....+.+.+..+. ..+++|++.+++.+.
T Consensus 295 l~~i~~~~~l~~~~~~L~~li~~~s~~D~~~~i~~~~ 331 (362)
T d1svma_ 295 SEFLLEKRIIQSGIALLLMLIWYRPVAEFAQSIQSRI 331 (362)
T ss_dssp CTHHHHTTCTTCHHHHHHHHHHHSCGGGSCGGGHHHH
T ss_pred HHHHhcccCCCCCHHHHHHHccCCCHHHHHHHHHHHH
Confidence 777778888887777665544 455667777766553
No 32
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.20 E-value=6.1e-10 Score=90.98 Aligned_cols=180 Identities=16% Similarity=0.125 Sum_probs=105.0
Q ss_pred ccccChHHHHHHHHHHhcC---CCCeEEEECCCCCcHHHHHHHHHHHHcc--CcccccEEEEecCCCcchHHHHHHHHHh
Q 021660 54 DVAAHRDIVDTIDRLTSEN---RLPHLLLYGPPGTGKTSTILAVARKLYG--AQYHNMILELNASDDRGIDVVRQQIQDF 128 (309)
Q Consensus 54 ~~ig~~~~~~~l~~~~~~~---~~~~~ll~G~~G~GKT~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
.++|++..++.+..++... ....+.|+|..|+||||+|+.+++.... ..+...++.++.........+...+...
T Consensus 21 ~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~~~ 100 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDIL 100 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHHHH
T ss_pred ceeCcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHHHHHHH
Confidence 4779999999998887542 2223889999999999999999887421 1111122223322222222232222222
Q ss_pred hhccc----ccc----C--------------CCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccch
Q 021660 129 ASTQS----FSF----G--------------VKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIP 186 (309)
Q Consensus 129 ~~~~~----~~~----~--------------~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~ 186 (309)
..... ... . ....+.++|+|++.. ..... .+. ...+++|+||+.. .+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~--~~~~~----~~~--~~~srilvTTR~~-~v~~ 171 (277)
T d2a5yb3 101 LMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQ--EETIR----WAQ--ELRLRCLVTTRDV-EISN 171 (277)
T ss_dssp HHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECC--HHHHH----HHH--HTTCEEEEEESBG-GGGG
T ss_pred HHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhH--Hhhhh----hhc--ccCceEEEEeehH-HHHH
Confidence 11100 000 0 012567999999874 22222 222 2356777777654 3334
Q ss_pred hhhcceeEEEecCCChHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHhcCCHHHHHHH
Q 021660 187 ALQSRCTRFRFAPLEPVHVTERLKHVIEAEGL-DVTEGGLAALVRLCNGDMRKALNI 242 (309)
Q Consensus 187 ~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~i~~~~~g~~r~~~~~ 242 (309)
.+......+++.+++.++..+++...+..... .-.++....|++.|+|.|-.+.-+
T Consensus 172 ~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~i 228 (277)
T d2a5yb3 172 AASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMF 228 (277)
T ss_dssp GCCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hcCCCCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHHH
Confidence 45556678999999999999988765322111 113556688999999998555443
No 33
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.06 E-value=1.4e-08 Score=87.79 Aligned_cols=83 Identities=18% Similarity=0.290 Sum_probs=58.6
Q ss_pred cccchhhhcce-eEEEecCCChHHHHHHHH-----------HHHHHcCCC--CCHHHHHHHHHHhc-------C-CHHHH
Q 021660 182 NKIIPALQSRC-TRFRFAPLEPVHVTERLK-----------HVIEAEGLD--VTEGGLAALVRLCN-------G-DMRKA 239 (309)
Q Consensus 182 ~~l~~~l~~r~-~~i~~~~~~~~~~~~~l~-----------~~~~~~~~~--~~~~~l~~i~~~~~-------g-~~r~~ 239 (309)
..+.|.|..|+ .++.+.+++.+++..+|. ..+...|+. ++++++..||+.+- + -.|.+
T Consensus 316 ~gliPEliGRlPi~v~L~~L~~~dL~rILtEPknsLikQy~~lf~~~gv~L~ft~~al~~iA~~A~~~n~~~~~~GAR~L 395 (443)
T d1g41a_ 316 SDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRL 395 (443)
T ss_dssp GGSCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHHHHHSCCCGGGHH
T ss_pred ccchhhhccceEEEEEccCccHHHHHHHHHhhhhhHHHHHHHHHhhcCcEEEEcHHHHHHHHHHHHHhhhhcccCCchHH
Confidence 45778899998 889999999999988873 233345664 58999999998773 1 25666
Q ss_pred HHHHHHHHhhc-----------CCcCHHHHHhhhCC
Q 021660 240 LNILQSTHMAS-----------QQITEEAVYLCTGN 264 (309)
Q Consensus 240 ~~~l~~~~~~~-----------~~i~~~~v~~~~~~ 264 (309)
..+++.+.... -.||.+.|++.+..
T Consensus 396 r~i~E~~l~~~~f~~p~~~~~~v~Id~~~v~~~l~~ 431 (443)
T d1g41a_ 396 HTVMERLMDKISFSASDMNGQTVNIDAAYVADALGE 431 (443)
T ss_dssp HHHHHHHHHHHHHHGGGCTTCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCCCCCCEEEECHHHHHhhhhc
Confidence 66666554321 14778888777754
No 34
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=98.77 E-value=2.9e-08 Score=75.03 Aligned_cols=117 Identities=20% Similarity=0.267 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhcCCCCe-EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccCC
Q 021660 60 DIVDTIDRLTSENRLPH-LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGV 138 (309)
Q Consensus 60 ~~~~~l~~~~~~~~~~~-~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (309)
..+..++.++++....+ ++|+|||++|||+++..+++.+.+ .++.+..... .. . +..
T Consensus 38 ~Fl~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G-----~vis~~N~~s-~F----------~------Lq~ 95 (205)
T d1tuea_ 38 TFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQG-----AVISFVNSTS-HF----------W------LEP 95 (205)
T ss_dssp HHHHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHTC-----EECCCCCSSS-CG----------G------GGG
T ss_pred HHHHHHHHHHcCCCCceEEEEECCCCccHHHHHHHHHHHhCC-----EEEeccCCCC-Cc----------c------ccc
Confidence 55667778886654444 999999999999999999999832 2222111111 11 0 111
Q ss_pred CCccEEEEEeCCCCCCHHHHHH-HHHHHHHhc-------------CCceEEEEecCCc---ccchhhhcceeEEEec
Q 021660 139 KASVKLVLLDEADAMTKDAQFA-LRRVIEKYT-------------KNTRFALICNQVN---KIIPALQSRCTRFRFA 198 (309)
Q Consensus 139 ~~~~~lliiDe~~~l~~~~~~~-l~~~l~~~~-------------~~~~~i~~~~~~~---~l~~~l~~r~~~i~~~ 198 (309)
-.+.+++++||+........+. +..+++..+ ..+++|+++|... .-.+.|.+|..++.|+
T Consensus 96 l~~~kv~l~dD~t~~~~~~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~~~d~~~~L~sRi~~f~F~ 172 (205)
T d1tuea_ 96 LTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFP 172 (205)
T ss_dssp GTTCSSEEEEEECHHHHHHHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTTSSSSCHHHHTSCEEEECC
T ss_pred ccCCeEEEEeccccchHHHHHHHHHhccCCCeeeeecccCCcccccCCCEEEEcCCCCCccccchhhhheEEEEECC
Confidence 1256899999986654443343 455666311 2346788887543 3346789999998886
No 35
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.67 E-value=9.5e-08 Score=72.12 Aligned_cols=25 Identities=28% Similarity=0.610 Sum_probs=22.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHcc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
+++|+||+|+|||||++.++..+..
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCC
Confidence 4899999999999999999999854
No 36
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.38 E-value=6.7e-07 Score=67.53 Aligned_cols=28 Identities=39% Similarity=0.666 Sum_probs=24.6
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHccCc
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLYGAQ 102 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~~~~ 102 (309)
.+++|+||||+||||+++.++..+...+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~~ 29 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSSG 29 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHTT
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHCC
Confidence 4599999999999999999999986543
No 37
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.36 E-value=2e-07 Score=75.33 Aligned_cols=56 Identities=25% Similarity=0.431 Sum_probs=37.7
Q ss_pred ccccccChHHHHHHHHHHhcC---CCC-eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 52 LADVAAHRDIVDTIDRLTSEN---RLP-HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 52 ~~~~ig~~~~~~~l~~~~~~~---~~~-~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
+.+.-++......+.....+. ..| .++|+||||||||++|+.++.++ ...++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ilL~GpPGtGKT~la~~la~~~-----~~~~~~i~~ 65 (273)
T d1gvnb_ 6 FTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEET-----QGNVIVIDN 65 (273)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHHHHHHHHHT-----TTCCEEECT
T ss_pred cChHHHHHHHHHHHHHHHhcccCCCCCEEEEEECCCCCCHHHHHHHHHHHh-----hcceEEEec
Confidence 333444555555555554433 223 39999999999999999999998 455666654
No 38
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=98.19 E-value=9.7e-06 Score=67.74 Aligned_cols=116 Identities=16% Similarity=0.236 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccC--cccccEEEEecCCCcchHHHHHHHHHhhhccccc-
Q 021660 59 RDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGA--QYHNMILELNASDDRGIDVVRQQIQDFASTQSFS- 135 (309)
Q Consensus 59 ~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (309)
+.-+.++...+.+ +..+|+||||||||+++..+...+... .....+ .+..........+.+.+..........
T Consensus 151 ~~Q~~A~~~al~~---~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I-~l~ApTgkAA~~L~e~~~~~~~~~~~~~ 226 (359)
T d1w36d1 151 NWQKVAAAVALTR---RISVISGGPGTGKTTTVAKLLAALIQMADGERCRI-RLAAPTGKAAARLTESLGKALRQLPLTD 226 (359)
T ss_dssp CHHHHHHHHHHTB---SEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCE-EEEBSSHHHHHHHHHHHTHHHHHSSCCS
T ss_pred cHHHHHHHHHHcC---CeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeE-EEecCcHHHHHHHHHHHHHHHhhcCchh
Confidence 3344455555533 459999999999999987766655321 122222 333333333334433332211110000
Q ss_pred -------------------------c----CCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC
Q 021660 136 -------------------------F----GVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181 (309)
Q Consensus 136 -------------------------~----~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~ 181 (309)
+ .......++||||+..+.... +..++...+....+|++++..
T Consensus 227 ~~~~~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l---~~~ll~~~~~~~~lILvGD~~ 298 (359)
T d1w36d1 227 EQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPM---MSRLIDALPDHARVIFLGDRD 298 (359)
T ss_dssp CCCCSCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCBHHH---HHHHHHTCCTTCEEEEEECTT
T ss_pred hhhhhhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccCHHH---HHHHHHHhcCCCEEEEECChh
Confidence 0 001135699999998887543 445555566778898888644
No 39
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=98.17 E-value=1.6e-05 Score=57.72 Aligned_cols=22 Identities=32% Similarity=0.443 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|+|+||+||||+++.++...
T Consensus 5 Iii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 7899999999999999987764
No 40
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.15 E-value=2.8e-06 Score=63.50 Aligned_cols=77 Identities=14% Similarity=0.111 Sum_probs=45.1
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCC
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMT 154 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~ 154 (309)
..++++|+||+||||+++.++... +. ..++.............+..... .+..+|+|.... .
T Consensus 15 ~liil~G~pGsGKST~a~~l~~~~-----~~--~~i~~D~~~~~~~~~~~~~~~l~----------~g~~vIiD~t~~-~ 76 (172)
T d1yj5a2 15 EVVVAVGFPGAGKSTFIQEHLVSA-----GY--VHVNRDTLGSWQRCVSSCQAALR----------QGKRVVIDNTNP-D 76 (172)
T ss_dssp CEEEEECCTTSSHHHHHHHHTGGG-----TC--EEEEHHHHCSHHHHHHHHHHHHH----------TTCCEEEESCCC-S
T ss_pred EEEEEECCCCCCHHHHHHHHHHhc-----CC--EEEchHHHHHHHHHHHHHHHHHH----------CCCCceeeCcCC-C
Confidence 349999999999999999887654 32 23333222222222333333322 244588887654 4
Q ss_pred HHHHHHHHHHHHHhc
Q 021660 155 KDAQFALRRVIEKYT 169 (309)
Q Consensus 155 ~~~~~~l~~~l~~~~ 169 (309)
......+..+.+...
T Consensus 77 ~~~R~~~~~~a~~~~ 91 (172)
T d1yj5a2 77 VPSRARYIQCAKDAG 91 (172)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcC
Confidence 556666776666554
No 41
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=98.14 E-value=1e-05 Score=64.57 Aligned_cols=125 Identities=14% Similarity=0.214 Sum_probs=74.3
Q ss_pred HHHHHHHHHhcC-CCCe-EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccCC
Q 021660 61 IVDTIDRLTSEN-RLPH-LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGV 138 (309)
Q Consensus 61 ~~~~l~~~~~~~-~~~~-~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (309)
....+..++.+. ...+ ++|+||+++|||+++..+++.+. .+..++..... +.++.
T Consensus 89 f~~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~lg------~~~~~~~~~~~-----------------f~l~~ 145 (267)
T d1u0ja_ 89 AASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTVP------FYGCVNWTNEN-----------------FPFND 145 (267)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHSS------CEEECCTTCSS-----------------CTTGG
T ss_pred HHHHHHHHHcCCCCccEEEEEEcCCCCCHHHHHHHHHHHhc------chhhccccCCC-----------------ccccc
Confidence 344556666544 2233 89999999999999999998871 11122222111 11222
Q ss_pred CCccEEEEEeCCCCCCHHHHHHHHHHHHHh--------------cCCceEEEEecCCccc----------chhhhcceeE
Q 021660 139 KASVKLVLLDEADAMTKDAQFALRRVIEKY--------------TKNTRFALICNQVNKI----------IPALQSRCTR 194 (309)
Q Consensus 139 ~~~~~lliiDe~~~l~~~~~~~l~~~l~~~--------------~~~~~~i~~~~~~~~l----------~~~l~~r~~~ 194 (309)
-.+.+++++||...-. ...+.+..++..- .+.+.+|+++|+.... ...+.+|+..
T Consensus 146 l~~k~~~~~~e~~~~~-~~~~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~~~~~~~~~~~l~~R~~~ 224 (267)
T d1u0ja_ 146 CVDKMVIWWEEGKMTA-KVVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQDRMFK 224 (267)
T ss_dssp GSSCSEEEECSCCEET-TTHHHHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEETTEEECTTHHHHHTTEEE
T ss_pred cCCCEEEEEeCCCccc-cHHHHHHHhcCCCceEeecccCCCcEeeCCeEEEEeCCCcccccCCCccccccchHhhhhEEE
Confidence 2368899999986543 3345565555531 1344566666665432 3679999988
Q ss_pred EEecC--------CChHHHHHHH
Q 021660 195 FRFAP--------LEPVHVTERL 209 (309)
Q Consensus 195 i~~~~--------~~~~~~~~~l 209 (309)
+.|.. ++.++++.++
T Consensus 225 ~~F~~~~p~~~~~i~~~e~k~f~ 247 (267)
T d1u0ja_ 225 FELTRRLDHDFGKVTKQEVKDFF 247 (267)
T ss_dssp EECCSCCCTTSCCCCHHHHHHHH
T ss_pred EECCCcCCCccCCCCHHHHHHHH
Confidence 88743 3345555555
No 42
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=98.08 E-value=1.1e-05 Score=61.70 Aligned_cols=36 Identities=33% Similarity=0.432 Sum_probs=27.8
Q ss_pred Ce-EEEECCCCCcHHHHHHHHHHHHccCcccccEEEE
Q 021660 75 PH-LLLYGPPGTGKTSTILAVARKLYGAQYHNMILEL 110 (309)
Q Consensus 75 ~~-~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~ 110 (309)
|+ ++|.||+|+||||++-.+|..+..++..+.++..
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~ 45 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAG 45 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 44 7899999999999999999988766554444433
No 43
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=98.06 E-value=1.3e-05 Score=61.54 Aligned_cols=38 Identities=18% Similarity=0.277 Sum_probs=31.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCC
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASD 114 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~ 114 (309)
++|.||+|+||||++-.+|..+..++..+.++..+.-.
T Consensus 14 i~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~R 51 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 51 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecccc
Confidence 89999999999999999999887777666666665544
No 44
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=98.03 E-value=3.6e-05 Score=58.92 Aligned_cols=139 Identities=11% Similarity=0.135 Sum_probs=68.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccC-------------------
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFG------------------- 137 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 137 (309)
++|.||+|+||||++-.+|..+...+..+.++..+.......+. ++.+.......+.
T Consensus 15 i~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQ----L~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~~ 90 (211)
T d1j8yf2 15 IMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQ----LQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKF 90 (211)
T ss_dssp EEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHH----HHHHHHHHTCCEECCTTCCCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHH----HHHhccccCcceeecccchhhhHHHHHHHHHh
Confidence 88899999999999999998887666655555544443222222 2222211111110
Q ss_pred CCCccEEEEEeCCCCCCHH----HHHHHHHHHHHhcCC-ceEEEEecCCcccchhhhcc-----eeEEEecCCChHHHHH
Q 021660 138 VKASVKLVLLDEADAMTKD----AQFALRRVIEKYTKN-TRFALICNQVNKIIPALQSR-----CTRFRFAPLEPVHVTE 207 (309)
Q Consensus 138 ~~~~~~lliiDe~~~l~~~----~~~~l~~~l~~~~~~-~~~i~~~~~~~~l~~~l~~r-----~~~i~~~~~~~~~~~~ 207 (309)
...+..+|+||=..+...+ ....+.++.+...+. ..+++.++...........+ ...+.|..++......
T Consensus 91 ~~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~TKlDet~~~G 170 (211)
T d1j8yf2 91 LSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGG 170 (211)
T ss_dssp HHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHHHHHHHCTTEEEEEECTTSCSCHH
T ss_pred hccCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHHhhhhcccCcceEEEecccCCCccc
Confidence 0124579999987664321 234555566555443 33444443333222232222 1445677777655444
Q ss_pred HHHHHHHHcCCC
Q 021660 208 RLKHVIEAEGLD 219 (309)
Q Consensus 208 ~l~~~~~~~~~~ 219 (309)
-+-..+...+++
T Consensus 171 ~~l~~~~~~~lP 182 (211)
T d1j8yf2 171 GALSAVAATGAT 182 (211)
T ss_dssp HHHHHHHTTTCC
T ss_pred HHHHHHHHHCcC
Confidence 444444444443
No 45
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=98.03 E-value=2.3e-05 Score=59.80 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=30.6
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCC
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASD 114 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~ 114 (309)
+..++|.||+|+||||++-.+|..+...+..+.++..+.-.
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R 46 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFR 46 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEecccc
Confidence 34489999999999999999999887666555544444433
No 46
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.98 E-value=2.9e-06 Score=63.13 Aligned_cols=25 Identities=48% Similarity=0.715 Sum_probs=23.2
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++++|+||||+||||+++.+++.+
T Consensus 4 ~~~I~i~G~pGsGKTTia~~La~~l 28 (173)
T d1rkba_ 4 LPNILLTGTPGVGKTTLGKELASKS 28 (173)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 3669999999999999999999998
No 47
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.96 E-value=6e-05 Score=57.53 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=28.3
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
++|.||+|+||||++..+|..+...+..+.++..+.
T Consensus 13 i~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt 48 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADT 48 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeccc
Confidence 788999999999999999999876666554444433
No 48
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=97.93 E-value=3e-05 Score=55.17 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=47.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhcccccc-------------------
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSF------------------- 136 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 136 (309)
..+|.+|+|+|||.++-.++... +..+..+... ..-...+.+.+...........
T Consensus 10 ~~ll~apTGsGKT~~~~~~~~~~-----~~~vli~~P~-~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (136)
T d1a1va1 10 VAHLHAPTGSGKSTKVPAAYAAQ-----GYKVLVLNPS-VAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTYGK 83 (136)
T ss_dssp EEEEECCTTSCTTTHHHHHHHTT-----TCCEEEEESC-HHHHHHHHHHHHHHHSCCCEEECSSCEECCCCSEEEEEHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHc-----CCcEEEEcCh-HHHHHHHHHHHHHHhhccccccccccccccccceEEEeeee
Confidence 48999999999998876555432 2222222222 2222333333333221111000
Q ss_pred ------CCCCccEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 021660 137 ------GVKASVKLVLLDEADAMTKDAQFALRRVIEKY 168 (309)
Q Consensus 137 ------~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~ 168 (309)
....+..+||+||+|.+.......+..+++..
T Consensus 84 ~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~l~~~ 121 (136)
T d1a1va1 84 FLADGGCSGGAYDIIICDECHSTDATSILGIGTVLDQA 121 (136)
T ss_dssp HHHTTGGGGCCCSEEEEETTTCCSHHHHHHHHHHHHHT
T ss_pred eccccchhhhcCCEEEEecccccCHHHHHHHHHHHHHH
Confidence 00124579999999999877666666666643
No 49
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.90 E-value=4.4e-06 Score=61.49 Aligned_cols=23 Identities=35% Similarity=0.644 Sum_probs=21.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++|.||||+||||+++.+++.+
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 58999999999999999999998
No 50
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=97.85 E-value=3.3e-05 Score=60.54 Aligned_cols=45 Identities=20% Similarity=0.428 Sum_probs=34.7
Q ss_pred CccEEEEEeCCC-CCCHHHHHHHHHHHHHhcCCceEEEEecCCccc
Q 021660 140 ASVKLVLLDEAD-AMTKDAQFALRRVIEKYTKNTRFALICNQVNKI 184 (309)
Q Consensus 140 ~~~~lliiDe~~-~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l 184 (309)
.++.++++||.- .+.......+++.+........+|++|++...+
T Consensus 156 ~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~ 201 (241)
T d2pmka1 156 NNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTV 201 (241)
T ss_dssp TCCSEEEECCCCSCCCHHHHHHHHHHHHHHHTTSEEEEECSSGGGG
T ss_pred cccchhhhhCCccccCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 378899999975 466777888888888876677788888776543
No 51
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=97.82 E-value=9e-06 Score=60.19 Aligned_cols=39 Identities=21% Similarity=0.242 Sum_probs=31.4
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecC
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 113 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~ 113 (309)
|.+.|+|++|+|||||++.+++.+...+....+...+..
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~~d~~ 41 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHH 41 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEeccccc
Confidence 568999999999999999999998777766555544443
No 52
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=97.81 E-value=5.5e-05 Score=53.69 Aligned_cols=24 Identities=29% Similarity=0.351 Sum_probs=17.5
Q ss_pred CeEEEECCCCCcHHHHHH-HHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTIL-AVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~-~l~~~~ 98 (309)
.+++|++|+|+|||..+- .+....
T Consensus 8 ~~~il~~~tGsGKT~~~~~~~~~~~ 32 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFLPQILAEC 32 (140)
T ss_dssp CEEEECCCTTSSTTTTHHHHHHHHH
T ss_pred CcEEEEcCCCCChhHHHHHHHHHHh
Confidence 459999999999996653 334443
No 53
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.81 E-value=5.6e-06 Score=62.32 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=22.4
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..++|.||||+||||+++.+++.+
T Consensus 8 K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 349999999999999999999997
No 54
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.81 E-value=4.1e-05 Score=56.73 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=24.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEE
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILE 109 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~ 109 (309)
.++|.|+||+||||+++.+|+.+ +..++.
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~L-----g~~~id 32 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARAL-----GYEFVD 32 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHH-----TCEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHh-----CCCEEe
Confidence 38889999999999999999998 555553
No 55
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.80 E-value=6.1e-06 Score=61.12 Aligned_cols=30 Identities=33% Similarity=0.551 Sum_probs=25.6
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHccCcccccEEE
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILE 109 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~ 109 (309)
|+++|.|+||+||||+++.+++.+ +..|+.
T Consensus 2 p~IvliG~~G~GKSTig~~La~~l-----~~~fiD 31 (165)
T d2iyva1 2 PKAVLVGLPGSGKSTIGRRLAKAL-----GVGLLD 31 (165)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHH-----TCCEEE
T ss_pred CcEEEECCCCCCHHHHHHHHHHHh-----CCCeEe
Confidence 568888999999999999999998 555553
No 56
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.77 E-value=2.3e-05 Score=60.16 Aligned_cols=28 Identities=25% Similarity=0.268 Sum_probs=23.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCccc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYH 104 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~ 104 (309)
++++|.||+||||+++.+++.+...+..
T Consensus 5 i~l~GlpgsGKSTla~~L~~~l~~~~~~ 32 (213)
T d1bifa1 5 IVMVGLPARGKTYISKKLTRYLNFIGVP 32 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999999988544433
No 57
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.76 E-value=7.7e-06 Score=60.87 Aligned_cols=26 Identities=42% Similarity=0.612 Sum_probs=23.1
Q ss_pred CCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 73 RLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 73 ~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+..+++|+||||+||||+++.+++.+
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHh
Confidence 34459999999999999999999986
No 58
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.73 E-value=0.00026 Score=59.86 Aligned_cols=111 Identities=16% Similarity=0.218 Sum_probs=68.7
Q ss_pred CCccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC-------------c
Q 021660 50 QSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD-------------R 116 (309)
Q Consensus 50 ~~~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~-------------~ 116 (309)
..++++--.+.....+.+++.... +.++|+||+|+||||++..+.+.+..... .++.+..+.. .
T Consensus 135 ~~l~~LG~~~~~~~~l~~l~~~~~-GliLvtGpTGSGKSTTl~~~l~~~~~~~~--~i~tiEdPiE~~~~~~~q~~v~~~ 211 (401)
T d1p9ra_ 135 LDLHSLGMTAHNHDNFRRLIKRPH-GIILVTGPTGSGKSTTLYAGLQELNSSER--NILTVEDPIEFDIDGIGQTQVNPR 211 (401)
T ss_dssp CCGGGSCCCHHHHHHHHHHHTSSS-EEEEEECSTTSCHHHHHHHHHHHHCCTTS--CEEEEESSCCSCCSSSEEEECBGG
T ss_pred hhhhhhcccHHHHHHHHHHHhhhh-ceEEEEcCCCCCccHHHHHHhhhhcCCCc--eEEEeccCcccccCCCCeeeecCC
Confidence 356677667777888887776653 34999999999999999999999865433 2333322210 1
Q ss_pred chHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEe
Q 021660 117 GIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALIC 178 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~ 178 (309)
....+...+..+... .+.+|+|.|+-. .+.....++.-. ...++++|
T Consensus 212 ~~~~~~~~l~~~lR~---------dPDvi~igEiRd--~~ta~~a~~aa~----tGhlV~tT 258 (401)
T d1p9ra_ 212 VDMTFARGLRAILRQ---------DPDVVMVGEIRD--LETAQIAVQASL----TGHLVMST 258 (401)
T ss_dssp GTBCHHHHHHHHGGG---------CCSEEEESCCCS--HHHHHHHHHHHH----TTCEEEEE
T ss_pred cCCCHHHHHHHHHhh---------cCCEEEecCcCC--hHHHHHHHHHHh----cCCeEEEE
Confidence 111234444444432 688999999864 333333333333 45566665
No 59
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.71 E-value=1e-05 Score=60.39 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=23.1
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQ 102 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~ 102 (309)
++|+|+||+||||+++.+++.+...+
T Consensus 9 I~l~G~~GsGKTTia~~La~~L~~~~ 34 (183)
T d1m8pa3 9 IFLTGYMNSGKDAIARALQVTLNQQG 34 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhcC
Confidence 88999999999999999999985433
No 60
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.71 E-value=1.2e-05 Score=61.04 Aligned_cols=27 Identities=30% Similarity=0.382 Sum_probs=23.4
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
++|+|+||+||||+++.+++.+.....
T Consensus 22 I~L~G~pGSGKTTiAk~La~~l~~~~~ 48 (195)
T d1x6va3 22 VWLTGLSGAGKTTVSMALEEYLVCHGI 48 (195)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCC
Confidence 789999999999999999999854443
No 61
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.70 E-value=0.00018 Score=54.91 Aligned_cols=41 Identities=20% Similarity=0.296 Sum_probs=30.2
Q ss_pred cccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 55 VAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 55 ~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+--++.-.+.+..++.+ .+.++.+|+|+|||.++..++..+
T Consensus 69 ~~Lr~yQ~eav~~~~~~---~~~ll~~~tG~GKT~~a~~~~~~~ 109 (206)
T d2fz4a1 69 ISLRDYQEKALERWLVD---KRGCIVLPTGSGKTHVAMAAINEL 109 (206)
T ss_dssp CCCCHHHHHHHHHHTTT---SEEEEEESSSTTHHHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHHHhC---CCcEEEeCCCCCceehHHhHHHHh
Confidence 33455666666666654 346788999999999988888876
No 62
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=97.69 E-value=9.2e-05 Score=58.39 Aligned_cols=44 Identities=23% Similarity=0.455 Sum_probs=33.4
Q ss_pred ccEEEEEeCCC-CCCHHHHHHHHHHHHHhcCCceEEEEecCCccc
Q 021660 141 SVKLVLLDEAD-AMTKDAQFALRRVIEKYTKNTRFALICNQVNKI 184 (309)
Q Consensus 141 ~~~lliiDe~~-~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l 184 (309)
++.++++||.- .+.......+++.+.....+..+|++|++...+
T Consensus 170 ~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~ 214 (253)
T d3b60a1 170 DSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTI 214 (253)
T ss_dssp CCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGT
T ss_pred CCCEEEeccccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHH
Confidence 67899999975 456777788888888776667788888766533
No 63
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.69 E-value=1.3e-05 Score=59.37 Aligned_cols=22 Identities=36% Similarity=0.611 Sum_probs=21.3
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|+||||+||||+++.+++.+
T Consensus 9 ivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 9 YVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp EEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 8899999999999999999998
No 64
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.68 E-value=9.6e-06 Score=60.17 Aligned_cols=22 Identities=36% Similarity=0.688 Sum_probs=21.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|+||||+||||+++.+++.+
T Consensus 5 I~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 5 YIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 8999999999999999999987
No 65
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.66 E-value=1.4e-05 Score=58.81 Aligned_cols=29 Identities=28% Similarity=0.513 Sum_probs=25.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEE
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILE 109 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~ 109 (309)
+++|.|+||+||||+++.+++.+ +..++.
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l-----~~~~~d 30 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDL-----DLVFLD 30 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH-----TCEEEE
T ss_pred cEEEECCCCCCHHHHHHHHHHHh-----CCCEEe
Confidence 48899999999999999999998 555553
No 66
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.64 E-value=9.2e-05 Score=57.31 Aligned_cols=43 Identities=12% Similarity=0.321 Sum_probs=32.3
Q ss_pred CccEEEEEeCCC-CCCHHHHHHHHHHHHHhc--CCceEEEEecCCc
Q 021660 140 ASVKLVLLDEAD-AMTKDAQFALRRVIEKYT--KNTRFALICNQVN 182 (309)
Q Consensus 140 ~~~~lliiDe~~-~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~ 182 (309)
.+|.+|++||.- .+.+.....+++++.+.. ....+|++|.+..
T Consensus 162 ~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~ 207 (230)
T d1l2ta_ 162 NNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN 207 (230)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCHH
T ss_pred cCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCHH
Confidence 378899999964 566778888888888763 2567788887654
No 67
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.64 E-value=2.7e-05 Score=57.78 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=21.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|+|+||+||||+++.+++++
T Consensus 5 iI~l~G~~GsGKsTva~~L~~~l 27 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHc
Confidence 48999999999999999999998
No 68
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.63 E-value=6.5e-05 Score=59.28 Aligned_cols=44 Identities=16% Similarity=0.404 Sum_probs=33.9
Q ss_pred ccEEEEEeCCC-CCCHHHHHHHHHHHHHhcCCceEEEEecCCccc
Q 021660 141 SVKLVLLDEAD-AMTKDAQFALRRVIEKYTKNTRFALICNQVNKI 184 (309)
Q Consensus 141 ~~~lliiDe~~-~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l 184 (309)
++.++++||.. .+.+.....+++.+........+|++|++...+
T Consensus 172 ~p~ililDEpts~LD~~t~~~i~~~l~~l~~~~TvI~itH~~~~~ 216 (255)
T d2hyda1 172 NPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTI 216 (255)
T ss_dssp CCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGT
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 67899999975 456777888899998877666778888766543
No 69
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.59 E-value=1.3e-05 Score=59.56 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=25.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
.++|.||||+||||+++.+++.+ +..++.++.
T Consensus 6 iI~l~G~~GsGKSTia~~La~~l-----g~~~~~~~~ 37 (176)
T d1zp6a1 6 ILLLSGHPGSGKSTIAEALANLP-----GVPKVHFHS 37 (176)
T ss_dssp EEEEEECTTSCHHHHHHHHHTCS-----SSCEEEECT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh-----CCCEEEecH
Confidence 38999999999999999998876 555555543
No 70
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.57 E-value=2.3e-05 Score=59.46 Aligned_cols=26 Identities=23% Similarity=0.537 Sum_probs=22.8
Q ss_pred CCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 73 RLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 73 ~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++..++|.||||+||||+++.+++.+
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~~ 30 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 33448999999999999999999987
No 71
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.54 E-value=0.00016 Score=55.95 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=30.7
Q ss_pred ccEEEEEeCC-CCCCHHHHHHHHHHHHHh--cCCceEEEEecCCcc
Q 021660 141 SVKLVLLDEA-DAMTKDAQFALRRVIEKY--TKNTRFALICNQVNK 183 (309)
Q Consensus 141 ~~~lliiDe~-~~l~~~~~~~l~~~l~~~--~~~~~~i~~~~~~~~ 183 (309)
++.+|++||. -.+.+.....+..++.+. .....+|++|.+...
T Consensus 148 ~P~illlDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~ 193 (232)
T d2awna2 148 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVE 193 (232)
T ss_dssp CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHHH
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 7889999995 456677777777777764 235667777876543
No 72
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=97.52 E-value=0.00098 Score=49.04 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHH
Q 021660 63 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 63 ~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
..+..++.... -.++|.|.+|+|||+|+..+...
T Consensus 5 ~~~~~~~~~k~-~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 5 TRIWRLFNHQE-HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHHTTSC-EEEEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHHhCCCe-EEEEEECCCCCCHHHHHHHHhcC
Confidence 34444444433 34999999999999999988654
No 73
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.52 E-value=2.9e-05 Score=58.65 Aligned_cols=25 Identities=20% Similarity=0.385 Sum_probs=22.8
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+..++|.||||+||||+++.+++.+
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3459999999999999999999997
No 74
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=97.51 E-value=4.4e-05 Score=57.18 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=26.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccE
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMI 107 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~ 107 (309)
.++|.|+||+||||+++.+++.+...+.....
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~ 34 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKM 34 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTTTCCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 48999999999999999999998666554433
No 75
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.49 E-value=0.00021 Score=56.18 Aligned_cols=43 Identities=16% Similarity=0.353 Sum_probs=31.2
Q ss_pred CccEEEEEeCCC-CCCHHHHHHHHHHHHHhcC--CceEEEEecCCc
Q 021660 140 ASVKLVLLDEAD-AMTKDAQFALRRVIEKYTK--NTRFALICNQVN 182 (309)
Q Consensus 140 ~~~~lliiDe~~-~l~~~~~~~l~~~l~~~~~--~~~~i~~~~~~~ 182 (309)
.++.++++||.- .+.......+.+.+.+... ...+|++|++..
T Consensus 168 ~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~l~ 213 (251)
T d1jj7a_ 168 RKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLS 213 (251)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSCHH
T ss_pred cCCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCCHH
Confidence 378899999964 5667777888888886543 456777777654
No 76
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.47 E-value=0.00036 Score=57.02 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHc
Q 021660 59 RDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 59 ~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
++....+..++..+ .+++++|++|+||||++++++..+.
T Consensus 153 ~~~~~~l~~~v~~~--~nili~G~tgSGKTT~l~al~~~i~ 191 (323)
T d1g6oa_ 153 EQAISAIKDGIAIG--KNVIVCGGTGSGKTTYIKSIMEFIP 191 (323)
T ss_dssp HHHHHHHHHHHHHT--CCEEEEESTTSSHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHhC--CCEEEEeeccccchHHHHHHhhhcc
Confidence 45666777777776 4599999999999999999998874
No 77
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.47 E-value=5.2e-05 Score=57.25 Aligned_cols=27 Identities=26% Similarity=0.546 Sum_probs=23.6
Q ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 72 NRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 72 ~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++..++|.||||+||||+++.+++.+
T Consensus 4 ~r~mrIiliG~PGSGKtT~a~~La~~~ 30 (189)
T d2ak3a1 4 ARLLRAAIMGAPGSGKGTVSSRITKHF 30 (189)
T ss_dssp SCCCEEEEECCTTSSHHHHHHHHHHHB
T ss_pred CcceeEEEECCCCCCHHHHHHHHHHHH
Confidence 345568999999999999999999986
No 78
>d1jqlb_ c.37.1.20 (B:) delta subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.47 E-value=0.00049 Score=48.90 Aligned_cols=124 Identities=13% Similarity=0.038 Sum_probs=79.1
Q ss_pred HHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccCCCCccEE
Q 021660 65 IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKL 144 (309)
Q Consensus 65 l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 144 (309)
+...+..+-.+.++|+|+.-.-+......+.+.+..+++........ ..... +...+.. ..+.+. |+ .+++
T Consensus 9 L~~~l~k~l~~vyll~G~E~~L~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~---~~~l~~~-~~t~sl-F~---~krl 79 (140)
T d1jqlb_ 9 LRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSI-DPNTD---WNAIFSL-CQAMSL-FA---SRQT 79 (140)
T ss_dssp HHHHHHHCCCSEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEECCCC-STTCC---HHHHHHH-HHCCCT-TC---CCEE
T ss_pred HHHHHhcCCCcEEEEEcChHHHHHHHHHHHHHHHHhCCcceeeeecc-cccCC---HHHHHHH-HcCCCc-cc---CcEE
Confidence 44455555456699999998888888888888875555443222221 12222 2222222 333222 22 6899
Q ss_pred EEEeCCCCCC-HHHHHHHHHHHHHhcCCceEEEEecCCc------ccchhhhcceeEEEe
Q 021660 145 VLLDEADAMT-KDAQFALRRVIEKYTKNTRFALICNQVN------KIIPALQSRCTRFRF 197 (309)
Q Consensus 145 liiDe~~~l~-~~~~~~l~~~l~~~~~~~~~i~~~~~~~------~l~~~l~~r~~~i~~ 197 (309)
|+|++.+... ....+.|.++++.+++.+.+|+++...+ ++.+.+..+..+|.+
T Consensus 80 i~i~~~~~~~~k~~~~~L~~~~~~~~~~~~lii~~~~~~k~~~~~k~~K~l~k~g~vI~C 139 (140)
T d1jqlb_ 80 LLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTC 139 (140)
T ss_dssp EEEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSSCCTTGGGSHHHHHHGGGCEEEEC
T ss_pred EEEEcCCCCCcHHHHHHHHHHHhCCCCCEEEEEEcCCCCchhhhhHHHHHHHhCCeEEeC
Confidence 9999887654 5556789999999999999998876433 345666666666654
No 79
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.46 E-value=0.00031 Score=54.54 Aligned_cols=44 Identities=16% Similarity=0.267 Sum_probs=32.1
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCceEEEEecCCcc
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYT--KNTRFALICNQVNK 183 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~~ 183 (309)
.+|.+|++||. -.+.+.....+.+++.+.. ....+|++|.+...
T Consensus 153 ~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~~g~tii~vTHd~~~ 199 (239)
T d1v43a3 153 VEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVE 199 (239)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHH
T ss_pred cCCCceeecCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 37889999995 4567777888888887753 25667778876654
No 80
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.46 E-value=6.7e-05 Score=56.59 Aligned_cols=24 Identities=33% Similarity=0.678 Sum_probs=21.8
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..++|.||||+||||.++.+++.+
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~ 27 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNF 27 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 348889999999999999999987
No 81
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.44 E-value=5.7e-05 Score=56.45 Aligned_cols=23 Identities=30% Similarity=0.556 Sum_probs=21.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++|.||||+||||.++.+++.+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 48999999999999999999997
No 82
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.43 E-value=0.00049 Score=51.15 Aligned_cols=23 Identities=30% Similarity=0.739 Sum_probs=21.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|.||||+||||+++.++..+
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~ 26 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERF 26 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 37888999999999999999997
No 83
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.43 E-value=5.2e-05 Score=57.56 Aligned_cols=24 Identities=21% Similarity=0.498 Sum_probs=22.0
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+.++|.||||+||||+++.+++.+
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 448999999999999999999986
No 84
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=97.43 E-value=0.00023 Score=55.42 Aligned_cols=44 Identities=11% Similarity=0.266 Sum_probs=31.6
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhcC-CceEEEEecCCcc
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYTK-NTRFALICNQVNK 183 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~~-~~~~i~~~~~~~~ 183 (309)
.++.++++||. ..+.+.....+.+++.+... ...+|++|.+.+.
T Consensus 150 ~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l~~ 195 (238)
T d1vpla_ 150 VNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLE 195 (238)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred cCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 47889999995 56677778888888876543 4566777766544
No 85
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.42 E-value=0.00022 Score=52.20 Aligned_cols=21 Identities=24% Similarity=0.407 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|++|+|||+|+..+...
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988764
No 86
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=97.42 E-value=8.6e-05 Score=58.16 Aligned_cols=43 Identities=19% Similarity=0.423 Sum_probs=29.2
Q ss_pred ccEEEEEeCCCC-CCHHHHHHHHHHHHHhcCCceEEEEecCCcc
Q 021660 141 SVKLVLLDEADA-MTKDAQFALRRVIEKYTKNTRFALICNQVNK 183 (309)
Q Consensus 141 ~~~lliiDe~~~-l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~ 183 (309)
++.++++||.-. +.......+.+.+........+|++|++...
T Consensus 157 ~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~ 200 (242)
T d1mv5a_ 157 NPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLST 200 (242)
T ss_dssp CCSEEEEECCSCSSCSSSCCHHHHHHHHHHTTSEEEEECCSHHH
T ss_pred CCCEEEecCCccccCHHHHHHHHHHHHHHcCCCEEEEEECCHHH
Confidence 678999999643 3444456666677666556677788876643
No 87
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=97.42 E-value=5e-05 Score=57.08 Aligned_cols=30 Identities=27% Similarity=0.382 Sum_probs=25.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHN 105 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~ 105 (309)
.++|.|+||+||||+++.+++.+...+...
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~~~ 32 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINN 32 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTCCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 478999999999999999999996555544
No 88
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.39 E-value=7.4e-05 Score=55.86 Aligned_cols=23 Identities=48% Similarity=0.898 Sum_probs=21.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++|.||||+||||.++.+++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 48899999999999999999997
No 89
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.38 E-value=0.00014 Score=54.82 Aligned_cols=27 Identities=22% Similarity=0.215 Sum_probs=23.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
+-|.||+|+||||+++.++..+...+.
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~~~ 51 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQGI 51 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhccccc
Confidence 569999999999999999998855443
No 90
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.37 E-value=7.1e-05 Score=56.62 Aligned_cols=24 Identities=25% Similarity=0.490 Sum_probs=22.1
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+.++|.||||+||||.++.+++.+
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 348999999999999999999987
No 91
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.36 E-value=8e-05 Score=54.78 Aligned_cols=37 Identities=11% Similarity=0.044 Sum_probs=30.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
.+-|+|++|+|||||+..+++.+...+..+.++..+.
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~d~ 39 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 39 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 3679999999999999999999987777666665443
No 92
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.35 E-value=0.0011 Score=48.67 Aligned_cols=22 Identities=32% Similarity=0.542 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|+..+...-
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999988654
No 93
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.35 E-value=0.00026 Score=54.92 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=34.7
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhcC--CceEEEEecCCcccchhhhcce
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYTK--NTRFALICNQVNKIIPALQSRC 192 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~~--~~~~i~~~~~~~~l~~~l~~r~ 192 (309)
.+|.+|++||. -.+.+.....+.+.+.+... ...+|++|.+.... ..+..|+
T Consensus 143 ~~P~illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~vtHd~~~~-~~~adri 197 (240)
T d2onka1 143 IQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEA-AMLADEV 197 (240)
T ss_dssp TCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHH-HHHCSEE
T ss_pred ccCCceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHH-HHhCCEE
Confidence 37889999995 45677778888888876532 55677777765443 2333443
No 94
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=97.34 E-value=0.00038 Score=53.61 Aligned_cols=44 Identities=20% Similarity=0.285 Sum_probs=32.3
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCceEEEEecCCcc
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYT--KNTRFALICNQVNK 183 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~~ 183 (309)
.+|.+|++||. -.+.+.....+.+++.+.. ....+|++|++...
T Consensus 144 ~~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~~ 190 (229)
T d3d31a2 144 TNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTE 190 (229)
T ss_dssp SCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHHH
Confidence 37889999995 4567777888888887753 25567778876653
No 95
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.33 E-value=0.0032 Score=45.79 Aligned_cols=22 Identities=18% Similarity=0.412 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|+..+...-
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999988753
No 96
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=97.32 E-value=0.0064 Score=43.39 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|+||+|||+|++.+...-
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 7899999999999999987664
No 97
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.31 E-value=9.5e-05 Score=55.32 Aligned_cols=23 Identities=30% Similarity=0.585 Sum_probs=21.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|.||||+||||.++.+++.+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999999998
No 98
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=97.31 E-value=0.0025 Score=49.11 Aligned_cols=49 Identities=14% Similarity=0.131 Sum_probs=39.5
Q ss_pred ccccccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHcc
Q 021660 52 LADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 52 ~~~~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
+..-..|..+.+.+.+.+....+...||+|..|+|||.++-..+.....
T Consensus 54 ~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~ 102 (233)
T d2eyqa3 54 FETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVD 102 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHT
T ss_pred cccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHH
Confidence 3334457888888999999988888999999999999998877766543
No 99
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.30 E-value=9.5e-05 Score=55.94 Aligned_cols=24 Identities=25% Similarity=0.517 Sum_probs=22.0
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+.++|.||||+||||.+..+++.+
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~ 32 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKY 32 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 458999999999999999999986
No 100
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=97.30 E-value=0.00011 Score=56.68 Aligned_cols=25 Identities=36% Similarity=0.585 Sum_probs=22.7
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.|.+.|.||||+||+|.++.+++.+
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~ 27 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEAL 27 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh
Confidence 3568889999999999999999998
No 101
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=97.29 E-value=0.00042 Score=54.05 Aligned_cols=52 Identities=17% Similarity=0.182 Sum_probs=36.4
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhcC-CceEEEEecCCcccchhhhcce
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYTK-NTRFALICNQVNKIIPALQSRC 192 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~~-~~~~i~~~~~~~~l~~~l~~r~ 192 (309)
.++.+|++||. -.+.+.....+.+++.+... ...+|+++.+..... .+.+|+
T Consensus 156 ~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~l~~~~-~~~drv 209 (240)
T d1ji0a_ 156 SRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGAL-KVAHYG 209 (240)
T ss_dssp TCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHCSEE
T ss_pred hCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HhCCEE
Confidence 37889999995 46778888888888887643 456777777665433 444554
No 102
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=97.29 E-value=0.00032 Score=54.48 Aligned_cols=44 Identities=11% Similarity=0.221 Sum_probs=32.1
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCceEEEEecCCcc
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYT--KNTRFALICNQVNK 183 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~~ 183 (309)
.+|.+|++||. -.+.+.....+.+++.+.. ....+|++|++.+.
T Consensus 156 ~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~~ 202 (240)
T d1g2912 156 RKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVE 202 (240)
T ss_dssp TCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHH
T ss_pred cCCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHHH
Confidence 37889999995 4567777888888887653 25677888876654
No 103
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=97.27 E-value=0.00064 Score=49.31 Aligned_cols=43 Identities=12% Similarity=0.159 Sum_probs=28.3
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~ 183 (309)
...++++|..+.........+...+.......++|++.|..+.
T Consensus 82 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~iilv~NK~Dl 124 (161)
T d2gj8a1 82 DRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADI 124 (161)
T ss_dssp SEEEEEEETTTCCCCSHHHHCHHHHHHSCTTCCEEEEEECHHH
T ss_pred cccceeeccccccchhhhhhhhhhhhhcccccceeeccchhhh
Confidence 4557777776655544455566677766667778888887653
No 104
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.26 E-value=0.0016 Score=47.33 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=19.0
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|++.+...
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999998764
No 105
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=97.25 E-value=0.00059 Score=51.52 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=17.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+.++++|+|+|||.++..++..
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~ 46 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEY 46 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHH
T ss_pred CeEEEeCCCCcHHHHHHHHHHH
Confidence 4889999999999876655543
No 106
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.24 E-value=0.0021 Score=46.78 Aligned_cols=22 Identities=23% Similarity=0.425 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|++.+...-
T Consensus 7 ivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987653
No 107
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=97.22 E-value=0.00019 Score=55.81 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=31.4
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhcC--CceEEEEecCCcc
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYTK--NTRFALICNQVNK 183 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~~--~~~~i~~~~~~~~ 183 (309)
.+|.+|++||. -.+.+.....+.+++.+... ...+|++|.+...
T Consensus 157 ~~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHdl~~ 203 (240)
T d3dhwc1 157 SNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDV 203 (240)
T ss_dssp TCCSEEEEESGGGSSCHHHHHHHHHHHHHHHHHHCCEEEEEBSCHHH
T ss_pred cCCCeEEeccccccCCHHHhhHHHHHHHHHHhccCCEEEEEcCCHHH
Confidence 37889999995 45677777888888876532 4567777776543
No 108
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.21 E-value=0.00012 Score=54.48 Aligned_cols=23 Identities=26% Similarity=0.486 Sum_probs=21.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|.||||+||||.++.+++.+
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999999987
No 109
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=97.20 E-value=0.0031 Score=45.98 Aligned_cols=21 Identities=24% Similarity=0.488 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+++..+...
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998764
No 110
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=97.20 E-value=0.00032 Score=57.42 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=35.4
Q ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcc
Q 021660 73 RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRG 117 (309)
Q Consensus 73 ~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 117 (309)
+...+-|+||||+|||||+..++..+...+..+.++.++++....
T Consensus 53 ~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ 97 (327)
T d2p67a1 53 NTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVT 97 (327)
T ss_dssp CSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC----
T ss_pred CceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeee
Confidence 334499999999999999999999998888888888888765443
No 111
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.19 E-value=0.00019 Score=54.93 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=27.0
Q ss_pred HHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHc
Q 021660 66 DRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 66 ~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
+....+.++..+.|+|.||+||||+++.+++.+.
T Consensus 16 r~~~~~~kg~vIwltGlsGsGKTTia~~L~~~l~ 49 (208)
T d1m7ga_ 16 RTELRNQRGLTIWLTGLSASGKSTLAVELEHQLV 49 (208)
T ss_dssp HHHHHTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHhCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4445555555599999999999999999998873
No 112
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.18 E-value=0.00058 Score=54.55 Aligned_cols=25 Identities=32% Similarity=0.509 Sum_probs=22.0
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHc
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
..+.|.||.|+|||||++.++..+.
T Consensus 63 e~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 63 EMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhCCCc
Confidence 3489999999999999999988764
No 113
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.17 E-value=0.00042 Score=52.62 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=26.0
Q ss_pred ccEEEEEeCCCCCCHH----HHHHHHHHHHHhcCCceEEEEe
Q 021660 141 SVKLVLLDEADAMTKD----AQFALRRVIEKYTKNTRFALIC 178 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~----~~~~l~~~l~~~~~~~~~i~~~ 178 (309)
...+||+||+|.+... ....++..+...++...+|+.|
T Consensus 138 ~~~~ii~DE~h~~~~~~r~~~~~~~l~~i~~~~~~~~~l~lS 179 (202)
T d2p6ra3 138 AVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLS 179 (202)
T ss_dssp GCCEEEETTGGGGGCTTTHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hhhhccccHHHHhcccccchHHHHHHHHHHhcCCCCcEEEEc
Confidence 4569999999987533 2445666676666677776655
No 114
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.17 E-value=0.002 Score=47.14 Aligned_cols=22 Identities=32% Similarity=0.561 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|++.+...-
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999988643
No 115
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.14 E-value=0.0025 Score=46.36 Aligned_cols=22 Identities=23% Similarity=0.499 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|++|+|||+|+..+...-
T Consensus 6 i~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999987653
No 116
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.13 E-value=0.00044 Score=53.68 Aligned_cols=44 Identities=14% Similarity=0.259 Sum_probs=30.5
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhc--CCceEEEEecCCcc
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYT--KNTRFALICNQVNK 183 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~~ 183 (309)
.+|.+|++||. -.+.+.....+.+++.+.. ....+|++|.+...
T Consensus 157 ~~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~g~tvi~vTHd~~~ 203 (242)
T d1oxxk2 157 KDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPAD 203 (242)
T ss_dssp TCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHHH
T ss_pred hcccceeecCCccCCCHHHHHHHHHHHHHHHhccCCEEEEEECCHHH
Confidence 37889999995 4566666777777777653 25567777776543
No 117
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.13 E-value=0.001 Score=52.57 Aligned_cols=28 Identities=29% Similarity=0.398 Sum_probs=24.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
...|+||||+|||+++..++.....++.
T Consensus 56 itei~G~~gsGKTtl~l~~~~~~q~~g~ 83 (263)
T d1u94a1 56 IVEIYGPESSGKTTLTLQVIAAAQREGK 83 (263)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTC
T ss_pred EEEEecCCCcHHHHHHHHHHHHHHcCCC
Confidence 3899999999999999999998865543
No 118
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.10 E-value=0.0019 Score=49.24 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=28.2
Q ss_pred ccEEEEEeCCCCCCHH-HHHHHHHHHHHhcCCceEEEEec
Q 021660 141 SVKLVLLDEADAMTKD-AQFALRRVIEKYTKNTRFALICN 179 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~-~~~~l~~~l~~~~~~~~~i~~~~ 179 (309)
.-+.+++||+|.+... ..+.+..+++..+....+++.+.
T Consensus 151 ~l~~lVlDEad~lld~~f~~~v~~I~~~~~~~~Q~vl~SA 190 (212)
T d1qdea_ 151 KIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSA 190 (212)
T ss_dssp TCCEEEEETHHHHHHTTCHHHHHHHHHHSCTTCEEEEEES
T ss_pred cceEEeehhhhhhcccchHHHHHHHHHhCCCCCeEEEEEe
Confidence 4678999999988653 35667777777776776666654
No 119
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.10 E-value=0.0002 Score=56.07 Aligned_cols=45 Identities=18% Similarity=0.317 Sum_probs=31.4
Q ss_pred HHHHHhcCCC--CeEEEECCCCCcHHHHHHHHHHHHccCcccccEEE
Q 021660 65 IDRLTSENRL--PHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILE 109 (309)
Q Consensus 65 l~~~~~~~~~--~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~ 109 (309)
|.+.+.++-+ ..++|+|+||+|||+++..++......+....++.
T Consensus 15 LD~~l~GGi~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is 61 (242)
T d1tf7a2 15 LDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFA 61 (242)
T ss_dssp HHHHTTSSEESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred HHHhhcCCCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceee
Confidence 3444554422 33999999999999999999999765554444443
No 120
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=97.09 E-value=0.00037 Score=56.95 Aligned_cols=41 Identities=29% Similarity=0.380 Sum_probs=34.7
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD 115 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~ 115 (309)
..+-|+||||+|||||+..+++.+...+..+.++.++++..
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~ 92 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSST 92 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGG
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccccH
Confidence 34999999999999999999999877787888887776543
No 121
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.08 E-value=0.00048 Score=54.24 Aligned_cols=52 Identities=12% Similarity=0.270 Sum_probs=35.8
Q ss_pred CccEEEEEeCC-CCCCHHHHHHHHHHHHHhc-CCceEEEEecCCcccchhhhcce
Q 021660 140 ASVKLVLLDEA-DAMTKDAQFALRRVIEKYT-KNTRFALICNQVNKIIPALQSRC 192 (309)
Q Consensus 140 ~~~~lliiDe~-~~l~~~~~~~l~~~l~~~~-~~~~~i~~~~~~~~l~~~l~~r~ 192 (309)
.++.+|++||. -.+.+.....+++++.+.. ....+|+++++.+.+. .+.+|.
T Consensus 167 ~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~til~vsHdl~~~~-~~~Drv 220 (254)
T d1g6ha_ 167 TNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVL-NYIDHL 220 (254)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTTG-GGCSEE
T ss_pred hCcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHH-HhCCEE
Confidence 37889999995 4567777788888887653 3456777777766543 344554
No 122
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=97.08 E-value=0.00054 Score=51.89 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=21.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
.+.|.||.|+|||||++.++..+.
T Consensus 29 i~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 29 VVNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp CEEEECCTTSSHHHHHHHHTTSSC
T ss_pred EEEEECCCCChHHHHHHHHhcccc
Confidence 488999999999999999988763
No 123
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.07 E-value=0.0018 Score=47.36 Aligned_cols=22 Identities=27% Similarity=0.582 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|++|+|||+|+..+...-
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999988754
No 124
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.06 E-value=0.00023 Score=54.89 Aligned_cols=22 Identities=23% Similarity=0.573 Sum_probs=20.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+.|.||||+||||.++.+++.+
T Consensus 6 IaIdGp~GsGKgT~ak~La~~l 27 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDF 27 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5677999999999999999998
No 125
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.04 E-value=0.0011 Score=48.67 Aligned_cols=22 Identities=23% Similarity=0.463 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|+..+...-
T Consensus 9 v~lvG~~~vGKTsLi~r~~~~~ 30 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQSY 30 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 9999999999999999887643
No 126
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.04 E-value=0.0042 Score=45.12 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|+..+...-
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 8999999999999999987664
No 127
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.02 E-value=0.0015 Score=48.01 Aligned_cols=21 Identities=29% Similarity=0.600 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|++|+|||+|+..+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 889999999999999988755
No 128
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.02 E-value=0.0024 Score=49.41 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=21.1
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..++|+||...|||++++.++-..
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~ 65 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIA 65 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEEeccCchhhHHHHHHHHHHH
Confidence 348999999999999999987765
No 129
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.02 E-value=0.0045 Score=46.60 Aligned_cols=24 Identities=29% Similarity=0.606 Sum_probs=21.4
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
|.++|.|+||+|||||+..+...-
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 569999999999999999998763
No 130
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.01 E-value=0.0024 Score=48.40 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=27.0
Q ss_pred ccEEEEEeCCCCCCHH-HHHHHHHHHHHhcCCceEEEEe
Q 021660 141 SVKLVLLDEADAMTKD-AQFALRRVIEKYTKNTRFALIC 178 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~-~~~~l~~~l~~~~~~~~~i~~~ 178 (309)
.-+.+|+||+|.+... ....+..+++..+.+..+++.+
T Consensus 146 ~l~~lVlDEaD~ll~~~f~~~i~~I~~~~~~~~Q~~l~S 184 (206)
T d1veca_ 146 HVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 184 (206)
T ss_dssp TCCEEEEETHHHHTSTTTHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccceEEEeccccccccchHHHHHHHHHhCCCCCEEEEEE
Confidence 4568999999987643 4566777777777666666655
No 131
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=97.00 E-value=0.00067 Score=52.58 Aligned_cols=43 Identities=21% Similarity=0.389 Sum_probs=29.5
Q ss_pred ccEEEEEeCC-CCCCHHHHHHHHHHHHHhcC-CceEEEEecCCcc
Q 021660 141 SVKLVLLDEA-DAMTKDAQFALRRVIEKYTK-NTRFALICNQVNK 183 (309)
Q Consensus 141 ~~~lliiDe~-~~l~~~~~~~l~~~l~~~~~-~~~~i~~~~~~~~ 183 (309)
++.++++||. ..+.......+.+++.+... ...+|+++++...
T Consensus 150 ~p~llllDEPt~gLD~~~~~~i~~~i~~l~~~g~tii~vtHdl~~ 194 (231)
T d1l7vc_ 150 AGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNH 194 (231)
T ss_dssp TCCEEEESSCSTTCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHH
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 4589999995 45677777888888887543 4456666655443
No 132
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.99 E-value=0.0023 Score=48.98 Aligned_cols=41 Identities=27% Similarity=0.426 Sum_probs=29.7
Q ss_pred ccEEEEEeCCCCCCHH-HHHHHHHHHHHhcCCceEEEEecCC
Q 021660 141 SVKLVLLDEADAMTKD-AQFALRRVIEKYTKNTRFALICNQV 181 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~-~~~~l~~~l~~~~~~~~~i~~~~~~ 181 (309)
.-+.+|+||+|.+... ..+.+..+++..+.+..+++++...
T Consensus 155 ~l~~lVlDEaD~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~ 196 (218)
T d2g9na1 155 YIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 196 (218)
T ss_dssp TCCEEEEESHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESCC
T ss_pred cceEEEeeecchhhcCchHHHHHHHHHhCCCCCeEEEEEecC
Confidence 4568999999988654 3567777778777777777766433
No 133
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.97 E-value=0.00068 Score=51.70 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=27.9
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHccCcccccEEE
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILE 109 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~ 109 (309)
..++|.|+.|+||||+++.+++.+...+....+..
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~~~g~~~~~~~ 37 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFT 37 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCCeEEEe
Confidence 34889999999999999999999876665444433
No 134
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=96.97 E-value=0.022 Score=41.15 Aligned_cols=21 Identities=29% Similarity=0.605 Sum_probs=18.5
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+.|.|++|+|||||++.+...
T Consensus 3 V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 3 VLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999743
No 135
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.96 E-value=0.00023 Score=53.40 Aligned_cols=22 Identities=27% Similarity=0.623 Sum_probs=21.1
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|+||+|+||||+++.++++.
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~ 25 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 8999999999999999999986
No 136
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.93 E-value=0.00026 Score=53.25 Aligned_cols=22 Identities=27% Similarity=0.600 Sum_probs=21.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.||+|+||||+++.+++..
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~ 24 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEH 24 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 8999999999999999999987
No 137
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=96.93 E-value=0.00076 Score=53.07 Aligned_cols=52 Identities=12% Similarity=0.264 Sum_probs=34.2
Q ss_pred CccEEEEEeCCC-CCCHHHHHHHHHHHHHhcC-CceEEEEecCCcccchhhhcce
Q 021660 140 ASVKLVLLDEAD-AMTKDAQFALRRVIEKYTK-NTRFALICNQVNKIIPALQSRC 192 (309)
Q Consensus 140 ~~~~lliiDe~~-~l~~~~~~~l~~~l~~~~~-~~~~i~~~~~~~~l~~~l~~r~ 192 (309)
.++.+|++||.- .+.+.....+++++.+... ...+|++|.+.... ..+..|.
T Consensus 166 ~~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~g~til~vtHdl~~~-~~~adri 219 (258)
T d1b0ua_ 166 MEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFA-RHVSSHV 219 (258)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHHHH-HHHCSEE
T ss_pred cCCCEEEeccccccCCHHHHHHHHHhhhhhcccCCceEEEeCCHHHH-HHhCCEE
Confidence 378899999964 5667777777777776543 34577777665443 3445554
No 138
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.91 E-value=0.00091 Score=52.33 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=21.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHHc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
++|+||||+|||+++..++....
T Consensus 39 ~li~G~pGsGKT~~~lq~~~~~~ 61 (254)
T d1pzna2 39 TEVFGEFGSGKTQLAHTLAVMVQ 61 (254)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEcCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999988764
No 139
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.90 E-value=0.0024 Score=46.89 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|++|+|||+|+..+...
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988664
No 140
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.90 E-value=0.0051 Score=44.62 Aligned_cols=22 Identities=27% Similarity=0.456 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|++.+...-
T Consensus 7 i~lvG~~~vGKTsli~rl~~~~ 28 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVEDS 28 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987653
No 141
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.90 E-value=0.0027 Score=48.05 Aligned_cols=23 Identities=22% Similarity=0.255 Sum_probs=20.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++|.|++|+|||+|+..+...-
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 58999999999999999998753
No 142
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.89 E-value=0.0034 Score=45.77 Aligned_cols=21 Identities=33% Similarity=0.574 Sum_probs=18.7
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|++.+...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999988654
No 143
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=96.89 E-value=0.0095 Score=43.62 Aligned_cols=103 Identities=11% Similarity=0.179 Sum_probs=53.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHcc--C---------------cccccEEEEecCCC-cchHHHHHHHHHhhhccccccC
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYG--A---------------QYHNMILELNASDD-RGIDVVRQQIQDFASTQSFSFG 137 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~--~---------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (309)
.+.|.|.+|+|||+|++.+...-.. . .....+..++.... .........+....... +
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~~~~~~~~~~~tt~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~---~- 82 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEA---L- 82 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTEEEEEEECCCCCCCCSHHHHHHHHHHHHH---T-
T ss_pred EEEEECCCCCCHHHHHHHHhCCCceeecccCCcccccccceeeeeeeeeeecccccccccccccchhcccccccc---c-
Confidence 4899999999999999998764210 0 01112233333221 11111111111111100 0
Q ss_pred CCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcc
Q 021660 138 VKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183 (309)
Q Consensus 138 ~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~ 183 (309)
....--++++|--+.... ....+.+.+.....+.++|++.|..+.
T Consensus 83 ~~ad~il~v~D~~~~~~~-~~~~i~~~l~~~~~~~piilv~NK~Dl 127 (178)
T d1wf3a1 83 ADVNAVVWVVDLRHPPTP-EDELVARALKPLVGKVPILLVGNKLDA 127 (178)
T ss_dssp SSCSEEEEEEETTSCCCH-HHHHHHHHHGGGTTTSCEEEEEECGGG
T ss_pred ccccceeeeechhhhhcc-cccchhhheeccccchhhhhhhccccc
Confidence 111345677776555443 345667777766556678888886654
No 144
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.88 E-value=0.0032 Score=47.70 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=27.5
Q ss_pred ccEEEEEeCCCCCCHH-HHHHHHHHHHHhcCCceEEEEec
Q 021660 141 SVKLVLLDEADAMTKD-AQFALRRVIEKYTKNTRFALICN 179 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~-~~~~l~~~l~~~~~~~~~i~~~~ 179 (309)
.-+.+++||+|.+... ....+..+++..+....+++.+.
T Consensus 143 ~l~~lV~DEaD~l~~~~f~~~v~~I~~~l~~~~Q~il~SA 182 (206)
T d1s2ma1 143 DCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSA 182 (206)
T ss_dssp TCCEEEEESHHHHSSHHHHHHHHHHHTTSCSSCEEEEEES
T ss_pred cceEEEeechhhhhhhhhHHHHHHHHHhCCCCCEEEEEEE
Confidence 4567999999988754 45667777777776666666553
No 145
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=96.87 E-value=0.0024 Score=46.31 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=19.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++|.|++|+|||+|++.+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 3899999999999999987654
No 146
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.85 E-value=0.004 Score=45.35 Aligned_cols=21 Identities=33% Similarity=0.531 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|+..+...
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 899999999999999988765
No 147
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.85 E-value=0.0045 Score=45.14 Aligned_cols=22 Identities=36% Similarity=0.407 Sum_probs=17.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|++|+|||+|+..+...-
T Consensus 6 i~vvG~~~vGKTsli~~~~~~~ 27 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTGE 27 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC---
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8899999999999998876653
No 148
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=96.84 E-value=0.0069 Score=47.91 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=25.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH-ccCcccccEEE
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL-YGAQYHNMILE 109 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~-~~~~~~~~~~~ 109 (309)
.++|.|+||+|||+++..++..+ ...+..+.++.
T Consensus 37 l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s 71 (277)
T d1cr2a_ 37 VIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAM 71 (277)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEee
Confidence 38999999999999999998764 33444444443
No 149
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.84 E-value=0.0014 Score=48.26 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|+..+...-
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8899999999999999887764
No 150
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=96.82 E-value=0.0016 Score=49.98 Aligned_cols=23 Identities=26% Similarity=0.336 Sum_probs=20.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|+||...|||++++.++-..
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ 59 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIA 59 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHH
T ss_pred EEEEECCCccccchhhhhhHHHH
Confidence 48999999999999999887664
No 151
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.82 E-value=0.0029 Score=46.25 Aligned_cols=21 Identities=24% Similarity=0.485 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|.+|+|||+|++.+...
T Consensus 8 i~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999988764
No 152
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.81 E-value=0.00045 Score=51.49 Aligned_cols=23 Identities=22% Similarity=0.582 Sum_probs=21.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|.||+|+||||+++.+.+..
T Consensus 4 iivl~GpsG~GK~tl~~~L~~~~ 26 (182)
T d1znwa1 4 VVVLSGPSAVGKSTVVRCLRERI 26 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhhC
Confidence 48999999999999999998886
No 153
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81 E-value=0.01 Score=44.77 Aligned_cols=39 Identities=18% Similarity=0.356 Sum_probs=27.3
Q ss_pred ccEEEEEeCCCCCCH--HHHHHHHHHHHHhcCCceEEEEec
Q 021660 141 SVKLVLLDEADAMTK--DAQFALRRVIEKYTKNTRFALICN 179 (309)
Q Consensus 141 ~~~lliiDe~~~l~~--~~~~~l~~~l~~~~~~~~~i~~~~ 179 (309)
+-+.+++||+|.+.. ...+.+..+++..+....+++.+.
T Consensus 145 ~l~~lVlDEaD~ll~~~~~~~~i~~I~~~~~~~~Q~il~SA 185 (207)
T d1t6na_ 145 HIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSA 185 (207)
T ss_dssp TCCEEEEESHHHHHSSHHHHHHHHHHHHTSCSSSEEEEEES
T ss_pred ccceeehhhhhhhhhcCCcHHHHHHHHHhCCCCCEEEEEee
Confidence 456899999997763 345566677777776776766553
No 154
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.80 E-value=0.0058 Score=46.77 Aligned_cols=39 Identities=28% Similarity=0.390 Sum_probs=28.1
Q ss_pred ccEEEEEeCCCCCCHH-HHHHHHHHHHHhcCCceEEEEec
Q 021660 141 SVKLVLLDEADAMTKD-AQFALRRVIEKYTKNTRFALICN 179 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~-~~~~l~~~l~~~~~~~~~i~~~~ 179 (309)
.-+.+|+||+|.+... ....+..+++..+....+++.+.
T Consensus 159 ~l~~lVlDEaD~ll~~~f~~~i~~I~~~l~~~~Q~ilfSA 198 (222)
T d2j0sa1 159 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 198 (222)
T ss_dssp TCCEEEEETHHHHTSTTTHHHHHHHHTTSCTTCEEEEEES
T ss_pred cceeeeecchhHhhhcCcHHHHHHHHHhCCCCCEEEEEEE
Confidence 4568999999987643 45667777777777776766553
No 155
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.79 E-value=0.00084 Score=51.19 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=26.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCccccc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNM 106 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~ 106 (309)
.+.|.|+.|+||||+++.+++.+...+....
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~ 35 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAE 35 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEE
Confidence 4788899999999999999999876665543
No 156
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.78 E-value=0.0039 Score=47.25 Aligned_cols=39 Identities=28% Similarity=0.427 Sum_probs=27.4
Q ss_pred ccEEEEEeCCCCCC-HHHHHHHHHHHHHhcCCceEEEEec
Q 021660 141 SVKLVLLDEADAMT-KDAQFALRRVIEKYTKNTRFALICN 179 (309)
Q Consensus 141 ~~~lliiDe~~~l~-~~~~~~l~~~l~~~~~~~~~i~~~~ 179 (309)
+-+.++|||+|.+. ......+..+++..+++..+++.+.
T Consensus 145 ~l~~lViDEad~l~~~~~~~~i~~I~~~~~~~~Q~i~~SA 184 (208)
T d1hv8a1 145 NVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSA 184 (208)
T ss_dssp SCCEEEEETHHHHHTTTTHHHHHHHHHTSCSSCEEEEECS
T ss_pred cCcEEEEEChHHhhcCCChHHHHHHHHhCCCCCeEEEEEc
Confidence 45689999999764 3345667777777777777777653
No 157
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.77 E-value=0.0027 Score=46.37 Aligned_cols=21 Identities=29% Similarity=0.634 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|+..+...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988764
No 158
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.75 E-value=0.0061 Score=44.21 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|+..+...-
T Consensus 6 ivlvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCENK 27 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999887643
No 159
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.73 E-value=0.00056 Score=52.28 Aligned_cols=26 Identities=23% Similarity=0.129 Sum_probs=22.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccC
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGA 101 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~ 101 (309)
.++|+||||+|||+++..++......
T Consensus 25 v~~i~G~~GsGKT~l~l~la~~~~~~ 50 (242)
T d1n0wa_ 25 ITEMFGEFRTGKTQICHTLAVTCQLP 50 (242)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 39999999999999999998876443
No 160
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=96.71 E-value=0.0047 Score=44.69 Aligned_cols=22 Identities=32% Similarity=0.329 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|++|+|||+|+..+...-
T Consensus 5 i~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 8899999999999999887654
No 161
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=96.69 E-value=0.0011 Score=47.74 Aligned_cols=23 Identities=26% Similarity=0.364 Sum_probs=21.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHHc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
++|.|+=|+|||++++.+++.+.
T Consensus 36 i~L~G~LGaGKTtfvr~~~~~lg 58 (158)
T d1htwa_ 36 VYLNGDLGAGKTTLTRGMLQGIG 58 (158)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEecCCCccHHHHHHHHHhhcc
Confidence 88999999999999999999983
No 162
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.69 E-value=0.0042 Score=45.47 Aligned_cols=21 Identities=33% Similarity=0.570 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+++..+...
T Consensus 8 I~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988754
No 163
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.67 E-value=0.0059 Score=46.16 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=27.8
Q ss_pred ccEEEEEeCCCCCCHHH-HHHHHHHHHHhcCCceEEEEec
Q 021660 141 SVKLVLLDEADAMTKDA-QFALRRVIEKYTKNTRFALICN 179 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~-~~~l~~~l~~~~~~~~~i~~~~ 179 (309)
+-+.++|||+|.+.... .+.+..++...+++..+++.+.
T Consensus 147 ~l~~lViDEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SA 186 (209)
T d1q0ua_ 147 TAHILVVDEADLMLDMGFITDVDQIAARMPKDLQMLVFSA 186 (209)
T ss_dssp GCCEEEECSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEES
T ss_pred cceEEEEeecccccccccHHHHHHHHHHCCCCCEEEEEEc
Confidence 45689999999887543 5566777777777777777653
No 164
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.65 E-value=0.0012 Score=50.14 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=26.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccE
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMI 107 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~ 107 (309)
+.|.|+.|+||||+++.+++.+...+..+.+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~ 33 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVAT 33 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 7889999999999999999998766665443
No 165
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=96.64 E-value=0.0065 Score=44.33 Aligned_cols=27 Identities=22% Similarity=0.361 Sum_probs=20.9
Q ss_pred cCCCCeEEEECCCCCcHHHHHHHHHHH
Q 021660 71 ENRLPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 71 ~~~~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+.+.-.+++.|++|+|||++++.+...
T Consensus 9 ~~k~~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 9 GNKEMRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp TTCCEEEEEEEETTSSHHHHHHHTTCC
T ss_pred CCCeEEEEEECCCCCCHHHHHHHHhcC
Confidence 333334999999999999999987543
No 166
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=96.64 E-value=0.0097 Score=43.39 Aligned_cols=21 Identities=33% Similarity=0.534 Sum_probs=18.6
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|++|+|||+|+..+...
T Consensus 19 I~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 19 ILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEESTTSSHHHHHHHHCCS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 999999999999999877543
No 167
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.63 E-value=0.0021 Score=48.21 Aligned_cols=21 Identities=38% Similarity=0.662 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|++|+|||+|+..+...
T Consensus 9 ivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhhC
Confidence 899999999999999988764
No 168
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.63 E-value=0.00073 Score=51.36 Aligned_cols=24 Identities=29% Similarity=0.493 Sum_probs=21.7
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..++|+||+|+||||+.+.+....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~ 26 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQ 26 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhhC
Confidence 348999999999999999999885
No 169
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.61 E-value=0.0049 Score=44.88 Aligned_cols=22 Identities=27% Similarity=0.543 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+++..++..-
T Consensus 7 i~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999988743
No 170
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.59 E-value=0.01 Score=42.92 Aligned_cols=21 Identities=19% Similarity=0.336 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|++|+|||+|+..+...
T Consensus 7 v~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 7 IAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998764
No 171
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.57 E-value=0.013 Score=42.43 Aligned_cols=22 Identities=32% Similarity=0.499 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|+..+...-
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887653
No 172
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.57 E-value=0.00051 Score=53.53 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|+||||+|||+++..++...
T Consensus 37 ~li~G~pGsGKT~l~lq~~~~~ 58 (251)
T d1szpa2 37 TELFGEFRTGKSQLCHTLAVTC 58 (251)
T ss_dssp EEEEESTTSSHHHHHHHHTTTT
T ss_pred EEEEcCCCCCHHHHHHHHHHHh
Confidence 9999999999999999887654
No 173
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.56 E-value=0.00071 Score=50.19 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=21.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|.||+|+||||+++.++++.
T Consensus 5 ~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 5 TLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHC
T ss_pred cEEEECCCCCCHHHHHHHHHHhC
Confidence 38999999999999999998875
No 174
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.55 E-value=0.0048 Score=44.95 Aligned_cols=21 Identities=29% Similarity=0.537 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|++|+|||++++.+...
T Consensus 9 i~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988764
No 175
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.55 E-value=0.0012 Score=51.57 Aligned_cols=23 Identities=22% Similarity=0.135 Sum_probs=21.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHHc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
++|+||||+|||+++..++....
T Consensus 40 ~~i~G~~GsGKT~lalq~~~~~~ 62 (258)
T d1v5wa_ 40 TEAFGEFRTGKTQLSHTLCVTAQ 62 (258)
T ss_dssp EEEECCTTCTHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999998754
No 176
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.52 E-value=0.0035 Score=46.22 Aligned_cols=22 Identities=23% Similarity=0.416 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|+..+...-
T Consensus 5 ivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999887754
No 177
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.52 E-value=0.014 Score=45.91 Aligned_cols=26 Identities=35% Similarity=0.502 Sum_probs=23.4
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQ 102 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~ 102 (309)
..|+||+|+|||+++..++......+
T Consensus 60 tei~G~~~sGKT~l~l~~~~~aqk~g 85 (268)
T d1xp8a1 60 TEIYGPESGGKTTLALAIVAQAQKAG 85 (268)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTT
T ss_pred EEEecCCccchHHHHHHHHHHHHhCC
Confidence 89999999999999999999886554
No 178
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.50 E-value=0.0033 Score=46.66 Aligned_cols=22 Identities=23% Similarity=0.372 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|+..+...-
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 8999999999999999887654
No 179
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.46 E-value=0.005 Score=45.03 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|++|+|||+++..+...
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999888764
No 180
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.46 E-value=0.005 Score=45.49 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=20.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|+..+...-
T Consensus 8 ivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 8 CVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999987754
No 181
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.42 E-value=0.0044 Score=45.33 Aligned_cols=21 Identities=29% Similarity=0.529 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|++|+|||+|+..+...
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 899999999999999988764
No 182
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=96.39 E-value=0.0035 Score=50.73 Aligned_cols=53 Identities=21% Similarity=0.336 Sum_probs=28.7
Q ss_pred CeEEEECCCCCcHHHHHHH-HHHHHccCccc-ccEEEEecCCCcchHHHHHHHHHh
Q 021660 75 PHLLLYGPPGTGKTSTILA-VARKLYGAQYH-NMILELNASDDRGIDVVRQQIQDF 128 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~-l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
.++++.|+||||||+++-. ++..+...... ..+..+..+. .....+...+...
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~-~aa~~~~~~~~~~ 79 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTN-KAAREMRERVQSL 79 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSH-HHHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccH-HHHHHHHHHHHhh
Confidence 3499999999999976644 44444332222 2333333333 3444455444443
No 183
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.34 E-value=0.0092 Score=46.92 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=26.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCC
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASD 114 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~ 114 (309)
..|+||+|+|||+++..++......+. .++.++...
T Consensus 63 ~e~~G~~~~GKT~l~l~~~~~~q~~g~--~~vyIDtE~ 98 (269)
T d1mo6a1 63 IEIYGPESSGKTTVALHAVANAQAAGG--VAAFIDAEH 98 (269)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred EEEecCCCcHHHHHHHHHHHHHhcCCC--EEEEEECCc
Confidence 899999999999999888887654443 344444443
No 184
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=96.33 E-value=0.0023 Score=51.42 Aligned_cols=23 Identities=30% Similarity=0.397 Sum_probs=17.0
Q ss_pred CeEEEECCCCCcHHHHHH-HHHHH
Q 021660 75 PHLLLYGPPGTGKTSTIL-AVARK 97 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~-~l~~~ 97 (309)
.+++|.|+||||||+++- .++..
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~l 38 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHL 38 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEeeCCccHHHHHHHHHHHH
Confidence 458999999999997654 34433
No 185
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=96.33 E-value=0.0047 Score=49.66 Aligned_cols=25 Identities=20% Similarity=0.212 Sum_probs=22.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccC
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGA 101 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~ 101 (309)
+-|.|++|+||||+++.+...+...
T Consensus 83 IGIaG~sgSGKSTla~~L~~lL~~~ 107 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTARVLQALLSRW 107 (308)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHTTS
T ss_pred EEEeCCCCCCCcHHHHHHHHHHhhh
Confidence 7899999999999999999998543
No 186
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.29 E-value=0.01 Score=43.38 Aligned_cols=21 Identities=33% Similarity=0.656 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|+..+...
T Consensus 10 i~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988764
No 187
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.26 E-value=0.0012 Score=50.31 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=21.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHHcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
+-|+|++|+||||+++.++..+..
T Consensus 5 IgI~G~~gSGKSTla~~L~~~l~~ 28 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVCAKIVQLLGQ 28 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTG
T ss_pred EEEECCCCCCHHHHHHHHHHHhch
Confidence 569999999999999999998843
No 188
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=96.24 E-value=0.038 Score=40.82 Aligned_cols=23 Identities=35% Similarity=0.531 Sum_probs=20.3
Q ss_pred CCeEEEECCCCCcHHHHHHHHHH
Q 021660 74 LPHLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~ 96 (309)
.+.+.|.|+||+|||||+..+..
T Consensus 23 ~~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 23 LPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHhcC
Confidence 35699999999999999999974
No 189
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=96.19 E-value=0.0031 Score=50.03 Aligned_cols=50 Identities=20% Similarity=0.272 Sum_probs=37.0
Q ss_pred HHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 63 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 63 ~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
..+...+..+....++++|.-|+||||++-.++..+...+..+.++..+.
T Consensus 9 ~~~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp 58 (279)
T d1ihua2 9 SALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP 58 (279)
T ss_dssp HHHHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred HHHHHHhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 34455555555455899999999999999999999877776655555553
No 190
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.15 E-value=0.0015 Score=50.84 Aligned_cols=24 Identities=25% Similarity=0.253 Sum_probs=21.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHHcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
++|.|+||+|||+++..++..+..
T Consensus 37 ~~i~G~~G~GKT~~~l~~a~~~~~ 60 (258)
T d2i1qa2 37 TEFAGVFGSGKTQIMHQSCVNLQN 60 (258)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999987743
No 191
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=96.15 E-value=0.0019 Score=47.63 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=19.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++|.|++|+|||||+..+...
T Consensus 15 kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp EEEEEEETTSSHHHHHHHHSCC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3999999999999999888554
No 192
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.11 E-value=0.007 Score=44.98 Aligned_cols=22 Identities=18% Similarity=0.329 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|+..+...-
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887654
No 193
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=96.10 E-value=0.0017 Score=50.32 Aligned_cols=23 Identities=30% Similarity=0.459 Sum_probs=20.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHHc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
++|.|++|+|||||+..+.+.+.
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~ 25 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLE 25 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEEcCCCCcHHHHHHHHHHHHh
Confidence 68999999999999999988763
No 194
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.10 E-value=0.0026 Score=48.58 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHH
Q 021660 62 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 62 ~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++.|..++.+ ...+|.|++|+|||||+.++...
T Consensus 86 ~~~L~~~l~~---kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 86 IEELKEYLKG---KISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp HHHHHHHHSS---SEEEEECSTTSSHHHHHHHHSTT
T ss_pred HhhHHHHhcC---CeEEEECCCCCCHHHHHHhhcch
Confidence 5556665543 34899999999999999988654
No 195
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=96.09 E-value=0.00089 Score=53.33 Aligned_cols=40 Identities=15% Similarity=0.258 Sum_probs=27.2
Q ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 73 RLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 73 ~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
+.|.+-++|++|+||||+++.+.+.+...+....+++.+.
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Ds 42 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDA 42 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGG
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCC
Confidence 3456999999999999999999998865554444554443
No 196
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.06 E-value=0.002 Score=46.32 Aligned_cols=22 Identities=27% Similarity=0.457 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++|.|+||+|||+|+..+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999998775
No 197
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=96.06 E-value=0.0062 Score=48.04 Aligned_cols=24 Identities=29% Similarity=0.365 Sum_probs=21.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
..+|+|++|+|||+++..++..+.
T Consensus 31 ~~~i~G~~G~GKS~l~l~la~~ia 54 (274)
T d1nlfa_ 31 VGALVSPGGAGKSMLALQLAAQIA 54 (274)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHH
Confidence 389999999999999999988764
No 198
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=96.02 E-value=0.027 Score=43.93 Aligned_cols=22 Identities=32% Similarity=0.588 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++|.|.+|+|||+++..+..+
T Consensus 34 ~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 34 TILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCcHHHHHHHHhCC
Confidence 3999999999999999999765
No 199
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=96.01 E-value=0.0092 Score=42.65 Aligned_cols=112 Identities=10% Similarity=0.084 Sum_probs=63.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcch--------------------------HHHHHHHHHhhh
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGI--------------------------DVVRQQIQDFAS 130 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~ 130 (309)
+.+|=-+|=||||.|-.++=+..+.+..+.++++--...... ............
T Consensus 5 i~vytG~GKGKTTAAlG~alRA~G~G~rV~ivQFlKg~~~~ge~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~ 84 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWETQNREADTAACMAVWQ 84 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECCTTCCCCGGGHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHHHHHHhcCCCEEEEEEEecCCcccchhhhhcccCcEEEEecCCCcccCCChHHHHHHHHHHHH
Confidence 555555799999999998888877766665555543221110 001111111110
Q ss_pred ccccccCCCCccEEEEEeCCCCCCHH---HHHHHHHHHHHhcCCceEEEEecCCcccchhhhcce
Q 021660 131 TQSFSFGVKASVKLVLLDEADAMTKD---AQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRC 192 (309)
Q Consensus 131 ~~~~~~~~~~~~~lliiDe~~~l~~~---~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~ 192 (309)
.... .-......+||+||+.....- ..+.+..+++..|...-+|+|++..+ +.+..+.
T Consensus 85 ~a~~-~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p---~~L~e~A 145 (157)
T d1g5ta_ 85 HGKR-MLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCH---RDILDLA 145 (157)
T ss_dssp HHHH-HTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCC---HHHHHHC
T ss_pred HHHH-HhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCC---HHHHHhc
Confidence 0000 001125789999997432110 14678888998888999999987654 3444444
No 200
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.98 E-value=0.0019 Score=49.76 Aligned_cols=22 Identities=32% Similarity=0.385 Sum_probs=18.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++|+|+||+|||+++..++..
T Consensus 28 ~~~I~G~~G~GKT~la~~~~~~ 49 (242)
T d1tf7a1 28 STLVSGTSGTGKTLFSIQFLYN 49 (242)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHH
Confidence 3999999999999999876654
No 201
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=95.96 E-value=0.0021 Score=46.52 Aligned_cols=22 Identities=27% Similarity=0.478 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||+|++.+...-
T Consensus 8 I~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 8999999999999999987653
No 202
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.89 E-value=0.0065 Score=43.96 Aligned_cols=21 Identities=29% Similarity=0.607 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|+..+...
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988765
No 203
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=95.87 E-value=0.021 Score=45.54 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=13.3
Q ss_pred CeEEEECCCCCcHHH
Q 021660 75 PHLLLYGPPGTGKTS 89 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~ 89 (309)
.+.++.+|+|+|||+
T Consensus 10 ~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 10 RLTIMDLHPGAGKTK 24 (305)
T ss_dssp CEEEECCCTTSSTTT
T ss_pred CcEEEEECCCCCHHH
Confidence 458999999999995
No 204
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.85 E-value=0.0031 Score=48.07 Aligned_cols=28 Identities=32% Similarity=0.298 Sum_probs=24.0
Q ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHcc
Q 021660 73 RLPHLLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 73 ~~~~~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
++..+.|.|+.|+||||+++.+++.+..
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 3445899999999999999999999843
No 205
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.82 E-value=0.0072 Score=47.94 Aligned_cols=24 Identities=29% Similarity=0.606 Sum_probs=20.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHHcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
+-|.|++|+||||++..+...+..
T Consensus 30 IGi~G~qGSGKSTl~~~l~~~L~~ 53 (286)
T d1odfa_ 30 IFFSGPQGSGKSFTSIQIYNHLME 53 (286)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEeECCCCCCHHHHHHHHHHHHHH
Confidence 568999999999999988877643
No 206
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=95.78 E-value=0.0054 Score=48.97 Aligned_cols=39 Identities=28% Similarity=0.350 Sum_probs=31.7
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
+..++++|.-|+||||++..+|..+...+....++..+.
T Consensus 8 p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp 46 (296)
T d1ihua1 8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (296)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 344899999999999999999999987777666666553
No 207
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.76 E-value=0.0013 Score=49.36 Aligned_cols=23 Identities=26% Similarity=0.382 Sum_probs=21.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|.|+.|+||||+++.+++.+
T Consensus 11 ~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 11 TVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp EEEEECSTTSCHHHHHHTTGGGT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 48999999999999999999887
No 208
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.75 E-value=0.0043 Score=45.40 Aligned_cols=21 Identities=38% Similarity=0.681 Sum_probs=8.6
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|.+|+|||+|++.+...
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEECCCCC------------
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999988764
No 209
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=95.72 E-value=0.0028 Score=46.47 Aligned_cols=22 Identities=32% Similarity=0.629 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++|.|++|+|||+++..+...
T Consensus 16 gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 16 GVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHHHc
Confidence 3999999999999999888765
No 210
>d2qw6a1 a.80.1.2 (A:241-328) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=95.71 E-value=0.011 Score=37.12 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCCHHHHHHHhh
Q 021660 268 KDIEQISYWLLNESFADSFKRISEMKMRKGLALVDIVREVT 308 (309)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~l~ 308 (309)
+.++.++++++++|++.++.++.+++ ..| +|..|.+.|.
T Consensus 2 d~iSA~~KSiRgSD~dAAlywlarml-~~G-D~~~i~RRLi 40 (88)
T d2qw6a1 2 DVISAFQKSIRGSDVDAALHYLARLV-EAG-DLASICRRLM 40 (88)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHH-HTT-CHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCccHHHHHHHHHH-HcC-ChhHHHHHHH
Confidence 45789999999999999999999999 888 8988887764
No 211
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.56 E-value=0.056 Score=37.34 Aligned_cols=27 Identities=30% Similarity=0.531 Sum_probs=20.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
-+++||-.+|||+-+-..++.....+.
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~ 31 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQY 31 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTC
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCC
Confidence 588999999999988777776644443
No 212
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.48 E-value=0.004 Score=46.15 Aligned_cols=21 Identities=33% Similarity=0.532 Sum_probs=18.6
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|++|+|||+|++.+...
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 899999999999999887653
No 213
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.38 E-value=0.0049 Score=44.58 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|+..+...
T Consensus 5 v~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998765
No 214
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=95.38 E-value=0.0029 Score=46.39 Aligned_cols=22 Identities=36% Similarity=0.561 Sum_probs=19.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++|.|++|+|||+++..+...
T Consensus 17 gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 17 GVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEcCCCCCHHHHHHHHHHc
Confidence 3999999999999999888764
No 215
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.38 E-value=0.0042 Score=48.06 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=22.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHcc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
.++|.|+.|+||||+++.+++.+..
T Consensus 4 ~IviEG~~GsGKST~~~~L~~~l~~ 28 (241)
T d2ocpa1 4 RLSIEGNIAVGKSTFVKLLTKTYPE 28 (241)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHCTT
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhh
Confidence 3899999999999999999999843
No 216
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.37 E-value=0.0049 Score=45.56 Aligned_cols=21 Identities=33% Similarity=0.561 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.|.+|+|||+|+..+...
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988764
No 217
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=95.34 E-value=0.005 Score=45.38 Aligned_cols=20 Identities=30% Similarity=0.634 Sum_probs=18.0
Q ss_pred eEEEECCCCCcHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVA 95 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~ 95 (309)
.+++.|++|+|||+|++.+.
T Consensus 19 KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 19 RILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp EEEEEEETTSSHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 39999999999999998764
No 218
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=95.34 E-value=0.031 Score=41.79 Aligned_cols=22 Identities=27% Similarity=0.250 Sum_probs=17.1
Q ss_pred CeEEEECCCCCcHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~ 96 (309)
.++++.-|+|+|||........
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~~ 62 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPAL 62 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCcchhhhhhh
Confidence 3599999999999987654433
No 219
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=95.34 E-value=0.0039 Score=45.39 Aligned_cols=22 Identities=32% Similarity=0.625 Sum_probs=19.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++|.|++|+|||+++..+.+.
T Consensus 17 gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 17 GVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHHHc
Confidence 3999999999999999888776
No 220
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.27 E-value=0.27 Score=38.22 Aligned_cols=87 Identities=13% Similarity=0.166 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccCCC
Q 021660 60 DIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVK 139 (309)
Q Consensus 60 ~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (309)
.+++.+..+. +...+.|.|++|+|||+++..+++..........++-.-... ..++.+.+..+.+.........
T Consensus 57 raID~l~pig---kGQr~~If~~~g~GKt~l~~~i~~~~~~~~~~v~V~~~iGer---~~ev~~~~~~~~~~~~~~~~~~ 130 (276)
T d2jdid3 57 KVVDLLAPYA---KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER---TREGNDLYHEMIESGVINLKDA 130 (276)
T ss_dssp HHHHHHSCEE---TTCEEEEEECTTSSHHHHHHHHHHHHTTTCSSEEEEEEESCC---HHHHHHHHHHHHHHTSSCSSSS
T ss_pred eeeeeecccc---CCCEEEeeCCCCCCHHHHHHHHHHHHHhhCCCeEEEEEeccC---hHHHHHHHHHHHhcCccccccc
Confidence 4444444333 335599999999999999999988753333223222222222 2333344444443222211111
Q ss_pred CccEEEEEeCCCC
Q 021660 140 ASVKLVLLDEADA 152 (309)
Q Consensus 140 ~~~~lliiDe~~~ 152 (309)
..+.+++.--.+.
T Consensus 131 ~~~tvvv~~~s~~ 143 (276)
T d2jdid3 131 TSKVALVYGQMNE 143 (276)
T ss_dssp CCCEEEEEECTTS
T ss_pred cceEEEEEECCCC
Confidence 2466777744443
No 221
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.25 E-value=0.01 Score=46.45 Aligned_cols=43 Identities=23% Similarity=0.221 Sum_probs=36.2
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHc
Q 021660 57 AHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 57 g~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
.|..++..+..-+.+..+.+-||.|..|+|||..+...+....
T Consensus 87 ~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~ 129 (264)
T d1gm5a3 87 AQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNY 129 (264)
T ss_dssp HHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHH
Confidence 4788888888888888877899999999999998877776653
No 222
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.18 E-value=0.0019 Score=50.05 Aligned_cols=25 Identities=12% Similarity=0.155 Sum_probs=22.4
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHc
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
..+.|.|+.|+||||+++.+++.+.
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHh
Confidence 4589999999999999999999874
No 223
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=95.06 E-value=0.035 Score=38.85 Aligned_cols=26 Identities=23% Similarity=0.349 Sum_probs=20.5
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQ 102 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~ 102 (309)
-+++||-.+|||+-+-..++.....+
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g 35 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAK 35 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTT
T ss_pred EEEEeccccHHHHHHHHHHHHhhhcC
Confidence 58899999999998877776664433
No 224
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.97 E-value=0.029 Score=36.29 Aligned_cols=42 Identities=21% Similarity=0.551 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCCHHHHHHHhh
Q 021660 267 PKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDIVREVT 308 (309)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~l~ 308 (309)
...+.++++.+..+++.+++..+.+++..+|.++.+|+.+|.
T Consensus 3 P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~dIl~~l~ 44 (95)
T d1sxjc1 3 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIV 44 (95)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 456789999999999999999999998678999999999885
No 225
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=94.97 E-value=0.0064 Score=45.16 Aligned_cols=19 Identities=21% Similarity=0.375 Sum_probs=16.9
Q ss_pred EEEECCCCCcHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVA 95 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~ 95 (309)
+-|+|++|+||||++..+.
T Consensus 6 IgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 6 IGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp EEEEECTTSCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 5689999999999999884
No 226
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.96 E-value=0.0055 Score=45.10 Aligned_cols=21 Identities=24% Similarity=0.499 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|+||+|||||+..+..+
T Consensus 3 I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 3 IIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 799999999999999998754
No 227
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.96 E-value=0.0072 Score=44.09 Aligned_cols=21 Identities=29% Similarity=0.415 Sum_probs=18.7
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++|.|.+|+|||+|+..+...
T Consensus 6 v~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988643
No 228
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=94.87 E-value=0.12 Score=35.79 Aligned_cols=35 Identities=9% Similarity=0.137 Sum_probs=22.7
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEe
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALIC 178 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~ 178 (309)
...+|+|||++.+.+ ....+...+... +..|++.+
T Consensus 79 ~~dvI~IDE~QFf~d-~i~~~~~~~~~~--g~~Viv~G 113 (139)
T d2b8ta1 79 ETKVIGIDEVQFFDD-RICEVANILAEN--GFVVIISG 113 (139)
T ss_dssp TCCEEEECSGGGSCT-HHHHHHHHHHHT--TCEEEEEC
T ss_pred CcCEEEechhhhcch-hHHHHHHHHHhc--CceEEEEE
Confidence 467999999999874 445555555543 33455554
No 229
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=94.79 E-value=0.052 Score=42.86 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=31.9
Q ss_pred cccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 55 VAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 55 ~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+.-++...+.+..++..+ +.++.-|+|+|||.++..++..+
T Consensus 112 ~~~rdyQ~~av~~~l~~~---~~il~~pTGsGKT~i~~~i~~~~ 152 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVNR---RRILNLPTSAGRSLIQALLARYY 152 (282)
T ss_dssp CCCCHHHHHHHHHHHHHS---EEEECCCTTSCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHhcC---CceeEEEcccCccHHHHHHHHHh
Confidence 445777778888888764 36788899999998888777655
No 230
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=94.67 E-value=0.015 Score=45.72 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=32.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecC
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 113 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~ 113 (309)
.+.|+|.-|+||||++-.++..+...|..+.++..+..
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 36689999999999999999999888877777777654
No 231
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=94.54 E-value=0.001 Score=51.16 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=18.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..+|.|++|+|||||+.++....
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC--
T ss_pred eEEEECCCCccHHHHHHhhccHh
Confidence 37899999999999999887654
No 232
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=94.47 E-value=0.25 Score=35.68 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=18.9
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~ 96 (309)
++-+.|.|++|||||+.++.+
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 388999999999999999974
No 233
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.33 E-value=0.0078 Score=46.03 Aligned_cols=24 Identities=29% Similarity=0.408 Sum_probs=21.3
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHH
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.|.++|+|.-|+||||+++.+.+.
T Consensus 3 iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 3 IAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCEEEEeeCCCCCHHHHHHHHHhc
Confidence 355899999999999999999885
No 234
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=94.30 E-value=0.07 Score=41.99 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=26.7
Q ss_pred HHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHc
Q 021660 65 IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 65 l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
+.-.+--++....+|.|++|+|||+++..+++...
T Consensus 34 ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~ 68 (289)
T d1xpua3 34 LDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIA 68 (289)
T ss_dssp HHHHSCCBTTCEEEEEECSSSSHHHHHHHHHHHHH
T ss_pred eeecccccCCCeeeEeCCCCCCHHHHHHHHHHHHh
Confidence 33333344556699999999999999999998764
No 235
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=94.27 E-value=0.015 Score=49.16 Aligned_cols=29 Identities=31% Similarity=0.329 Sum_probs=23.9
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
.|+++.|++|+|||+++..++.++...+.
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~ 79 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGD 79 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCC
Confidence 46999999999999999888877755443
No 236
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=94.27 E-value=0.014 Score=44.01 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=29.4
Q ss_pred eEEEECCC-CCcHHHHHHHHHHHHccCcccccEEE
Q 021660 76 HLLLYGPP-GTGKTSTILAVARKLYGAQYHNMILE 109 (309)
Q Consensus 76 ~~ll~G~~-G~GKT~l~~~l~~~~~~~~~~~~~~~ 109 (309)
.++++|-. |+||||++-.++..+...|+.+.++.
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 48999994 99999999999999988887766654
No 237
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.25 E-value=0.03 Score=42.49 Aligned_cols=22 Identities=27% Similarity=0.389 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|.+|+|||++++.+...-
T Consensus 9 illlG~~~vGKTsll~~~~~~~ 30 (221)
T d1azta2 9 LLLLGAGESGKSTIVKQMRILH 30 (221)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 9999999999999999986554
No 238
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.19 E-value=0.012 Score=43.69 Aligned_cols=18 Identities=28% Similarity=0.547 Sum_probs=17.5
Q ss_pred EEEECCCCCcHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAV 94 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l 94 (309)
++|.|.+|+|||+++..+
T Consensus 5 ivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 899999999999999998
No 239
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.19 E-value=0.015 Score=45.96 Aligned_cols=22 Identities=36% Similarity=0.499 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.+|+|+.|+||||++.+++-.+
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~l 47 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVGL 47 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5899999999999999987655
No 240
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.13 E-value=0.012 Score=42.89 Aligned_cols=22 Identities=18% Similarity=0.439 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.+.|.|.+|+|||||+.++.++
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3889999999999999999754
No 241
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=94.10 E-value=0.02 Score=45.45 Aligned_cols=38 Identities=24% Similarity=0.345 Sum_probs=31.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecC
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 113 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~ 113 (309)
.+.++|.-|+||||++..++..+...|..+-++..+..
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ 41 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK 41 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 46779999999999999999999877777777777654
No 242
>d1iqpa1 a.80.1.1 (A:233-327) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.05 E-value=0.061 Score=34.68 Aligned_cols=43 Identities=21% Similarity=0.460 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCCHHHHHHHhh
Q 021660 266 LPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDIVREVT 308 (309)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~l~ 308 (309)
...++..+++.+..+++.++...+.+++...|+++.+|+.+|.
T Consensus 3 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~dIl~~l~ 45 (95)
T d1iqpa1 3 RPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMH 45 (95)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3456889999999999999999999998678999999999875
No 243
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=94.02 E-value=0.016 Score=43.59 Aligned_cols=19 Identities=37% Similarity=0.476 Sum_probs=17.0
Q ss_pred EEEECCCCCcHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVA 95 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~ 95 (309)
+.|+|++|+||||+++.+.
T Consensus 6 IgitG~igSGKStv~~~l~ 24 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA 24 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH
T ss_pred EEEECCCcCCHHHHHHHHH
Confidence 6689999999999998775
No 244
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.98 E-value=0.018 Score=42.10 Aligned_cols=22 Identities=27% Similarity=0.264 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|.+|+|||+|+..+...-
T Consensus 8 i~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 8 LGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999887753
No 245
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=93.91 E-value=0.19 Score=37.93 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=21.5
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.|.+-+.|.+++|||||+.++....
T Consensus 5 ~p~IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 5 SPIVSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCccHHHHHHHHHhhc
Confidence 3558999999999999999998764
No 246
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=93.80 E-value=0.018 Score=42.29 Aligned_cols=21 Identities=29% Similarity=0.529 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+.|.|.+|+|||||+.++...
T Consensus 11 V~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 11 VAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEECSTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 899999999999999998754
No 247
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=93.79 E-value=0.38 Score=37.62 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 60 DIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 60 ~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.+++.+..+.++ ..+.|.|++|+|||+++..++...
T Consensus 57 raID~l~pig~G---Qr~~If~~~g~GKt~ll~~~~~~~ 92 (285)
T d2jdia3 57 KAVDSLVPIGRG---QRELIIGDRQTGKTSIAIDTIINQ 92 (285)
T ss_dssp HHHHHHSCCBTT---CBCEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEecccCccCC---CEEEeecCCCCChHHHHHHHHHhH
Confidence 444444444333 458999999999999998887654
No 248
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.72 E-value=0.017 Score=42.76 Aligned_cols=22 Identities=32% Similarity=0.375 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|..|+|||+++..+...-
T Consensus 5 iv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 8999999999999999996664
No 249
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=93.67 E-value=0.016 Score=42.60 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=18.3
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~ 96 (309)
.+-|.|+|++|||||+..+..
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 488999999999999988743
No 250
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=93.62 E-value=0.0095 Score=43.68 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=19.1
Q ss_pred CeEEEECCCCCcHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~ 96 (309)
+.+.|.|.|++|||+|++++..
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTCC
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 4599999999999999988743
No 251
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=93.60 E-value=0.015 Score=42.59 Aligned_cols=23 Identities=35% Similarity=0.520 Sum_probs=19.4
Q ss_pred CeEEEECCCCCcHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+.+.|.|.||+|||||+..+...
T Consensus 2 ~~VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 2 ADVGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp CSEEEECCGGGCHHHHHHHHCSS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 34889999999999999988643
No 252
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=93.59 E-value=0.014 Score=47.27 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=23.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQ 102 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~ 102 (309)
+.|.|+-|+||||+++.+++.+...+
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~~g 33 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAITP 33 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTTSG
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhcC
Confidence 88999999999999999999885443
No 253
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=93.59 E-value=0.018 Score=43.31 Aligned_cols=19 Identities=32% Similarity=0.333 Sum_probs=16.6
Q ss_pred EEEECCCCCcHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVA 95 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~ 95 (309)
+-|+|+.|+||||+++.+.
T Consensus 5 IgITG~igSGKStv~~~l~ 23 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT 23 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 5689999999999988774
No 254
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=93.58 E-value=0.055 Score=48.38 Aligned_cols=56 Identities=16% Similarity=0.265 Sum_probs=39.0
Q ss_pred hhhhcCCCCccccccChHHH--HHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 43 WVEKYRPQSLADVAAHRDIV--DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 43 ~~~~~~p~~~~~~ig~~~~~--~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+...|+.....++..+--.+ .+...+...++...+++.|.+|+|||..++.+.+.+
T Consensus 53 ~~~~y~~~~~~~~~PHif~iA~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 53 DIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp HHHHHSSCCGGGSCCCHHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCChHHHHHHHHHHHHHHcCCCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 45566655554544433333 244555666666679999999999999999998887
No 255
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=93.58 E-value=0.31 Score=36.75 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=61.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhhhccccccC------------------
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFG------------------ 137 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 137 (309)
..+|.=+.|.|||..+-.++..+...+....+..+.+.. -...+...+............
T Consensus 33 g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~--l~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~vvi~~ 110 (230)
T d1z63a1 33 GICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLS--VLKNWEEELSKFAPHLRFAVFHEDRSKIKLEDYDIILTT 110 (230)
T ss_dssp CEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECST--THHHHHHHHHHHCTTSCEEECSSSTTSCCGGGSSEEEEE
T ss_pred CEEEEeCCCCChHHHHHHhhhhhhhcccccccceecchh--hhhHHHHHHHhhcccccceeeccccchhhccCcCEEEee
Confidence 378888999999998888877764443333333333332 223344443333221110000
Q ss_pred ----------CCCccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcce
Q 021660 138 ----------VKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRC 192 (309)
Q Consensus 138 ----------~~~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~ 192 (309)
...+..+||+||++.+.... ......+.......+++++++....-+..+.+.+
T Consensus 111 ~~~~~~~~~l~~~~~~~vI~DEah~~k~~~-s~~~~~~~~l~a~~r~~LTgTPi~n~~~dl~~ll 174 (230)
T d1z63a1 111 YAVLLRDTRLKEVEWKYIVIDEAQNIKNPQ-TKIFKAVKELKSKYRIALTGTPIENKVDDLWSIM 174 (230)
T ss_dssp HHHHTTCHHHHTCCEEEEEEETGGGGSCTT-SHHHHHHHTSCEEEEEEECSSCSTTCHHHHHHHH
T ss_pred HHHHHhHHHHhcccceEEEEEhhhcccccc-hhhhhhhhhhccceEEEEecchHHhHHHHHHHHH
Confidence 01256689999999885322 1222334444445567777776665555555544
No 256
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.58 E-value=0.11 Score=34.81 Aligned_cols=24 Identities=8% Similarity=0.124 Sum_probs=22.4
Q ss_pred EEEECCCCCcHHHHHHHHHHHHcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
++|+|-+|+||++++.++...+..
T Consensus 9 i~~tg~~~~gk~~ia~al~~~l~q 32 (122)
T d1g8fa3 9 IVLGNSLTVSREQLSIALLSTFLQ 32 (122)
T ss_dssp EEECTTCCSCHHHHHHHHHHHHTT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHH
Confidence 899999999999999999988865
No 257
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=93.55 E-value=0.0063 Score=43.65 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+.|.|.||+|||+|+.++..+-
T Consensus 3 I~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999998763
No 258
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.44 E-value=0.57 Score=31.25 Aligned_cols=75 Identities=11% Similarity=0.256 Sum_probs=47.2
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC--cccchhhhcceeEEEecCCChHHHHHHHHHHHHHcC
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV--NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEG 217 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~--~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~ 217 (309)
.+.++++|- .++.-..-.+...+....+..++|++|... .....++..-+.-+-.+|.+.+++...+++.+++.|
T Consensus 45 ~~dlvl~D~--~mP~~~G~el~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~rrG 121 (121)
T d1ys7a2 45 RPDAIVLDI--NMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG 121 (121)
T ss_dssp CCSEEEEES--SCSSSCHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEe--eccCcccHHHHHHHHhcCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 467899984 222222334445555555566666666432 233445555556678889999999999988887654
No 259
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=93.33 E-value=0.092 Score=35.70 Aligned_cols=42 Identities=10% Similarity=0.083 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCCHHHHHHHhh
Q 021660 266 LPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDIVREVT 308 (309)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~l~ 308 (309)
..+.++++++++..+|..+++..+++++ +.|.++..++..|.
T Consensus 3 D~~~~~~L~~~I~~~d~~~~L~~l~~i~-~~G~d~~~~l~~L~ 44 (126)
T d1jr3a1 3 DDDQALSLVEAMVEANGERVMALINEAA-ARGIEWEALLVEML 44 (126)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHH-HTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHH-HhCCCHHHHHHHHH
Confidence 4567899999999999999999999999 99999999988764
No 260
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=93.23 E-value=0.028 Score=43.18 Aligned_cols=23 Identities=22% Similarity=0.283 Sum_probs=20.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.+.|+|+.|+||||++..++...
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHhC
Confidence 37899999999999999998864
No 261
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=93.22 E-value=0.25 Score=38.56 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=19.6
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..+.|.|++|+|||+++..++...
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~~ 91 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILNQ 91 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHTC
T ss_pred ceEeeccCCCCChHHHHHHHHhhh
Confidence 458899999999999998765543
No 262
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=93.16 E-value=0.022 Score=46.16 Aligned_cols=24 Identities=33% Similarity=0.380 Sum_probs=22.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHHcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
++|-|+-|+||||+++.+++.+..
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEECCccCCHHHHHHHHHHHhcc
Confidence 899999999999999999998743
No 263
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=93.12 E-value=0.07 Score=47.84 Aligned_cols=56 Identities=23% Similarity=0.357 Sum_probs=37.4
Q ss_pred hhhhcCCCCccccccChHHHH--HHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 43 WVEKYRPQSLADVAAHRDIVD--TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 43 ~~~~~~p~~~~~~ig~~~~~~--~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+.+.|+.....++..+--.+. +....+..++...+++.|++|+|||...+.+.+.+
T Consensus 92 ~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 92 MVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp HHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 345565555444443333322 34455556666679999999999999999998876
No 264
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=93.10 E-value=0.62 Score=35.99 Aligned_cols=23 Identities=35% Similarity=0.426 Sum_probs=20.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++.+.|..|+|||||+.++....
T Consensus 4 Nv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 4 TVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEcCCCCcHHHHHHHHHHHc
Confidence 58899999999999999997654
No 265
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.93 E-value=0.031 Score=41.03 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++|.|..|+|||++++.+...-
T Consensus 5 ivllG~~~vGKTsl~~r~~~~~ 26 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKIIH 26 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 8999999999999999886553
No 266
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=92.90 E-value=0.0092 Score=44.44 Aligned_cols=24 Identities=33% Similarity=0.433 Sum_probs=21.4
Q ss_pred EEEECCCCCcHHHHHHHHHHHHcc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYG 100 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~ 100 (309)
.+|+||.|+|||+++.++.-.+.+
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~g 50 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALIP 50 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHHhcC
Confidence 688999999999999999988744
No 267
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=92.86 E-value=0.019 Score=46.34 Aligned_cols=23 Identities=26% Similarity=0.287 Sum_probs=20.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.-+|+||.|+|||+++.++.-.+
T Consensus 28 lnvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 28 FTAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 36999999999999999997665
No 268
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=92.79 E-value=1.2 Score=32.74 Aligned_cols=23 Identities=22% Similarity=0.160 Sum_probs=20.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++.+.|.++.|||||+.++....
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~~ 27 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYVA 27 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHh
Confidence 38899999999999999997554
No 269
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.57 E-value=0.03 Score=45.19 Aligned_cols=23 Identities=35% Similarity=0.446 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..+|+|+.|+|||+++.++.-.+
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 37899999999999999987655
No 270
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=92.56 E-value=0.097 Score=46.96 Aligned_cols=55 Identities=18% Similarity=0.321 Sum_probs=36.9
Q ss_pred hhhcCCCCccccccChHHHH--HHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 44 VEKYRPQSLADVAAHRDIVD--TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 44 ~~~~~p~~~~~~ig~~~~~~--~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
...|+.....++..+--.+. +...+...++...+++.|.+|+|||...+.+.+.+
T Consensus 59 ~~~y~~~~~~~~~PHif~vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 59 IDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp HHHTTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44555544444433332222 44455556666679999999999999999998887
No 271
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=92.49 E-value=0.094 Score=47.24 Aligned_cols=56 Identities=21% Similarity=0.396 Sum_probs=37.5
Q ss_pred hhhhcCCCCccccccChHHH--HHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 43 WVEKYRPQSLADVAAHRDIV--DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 43 ~~~~~~p~~~~~~ig~~~~~--~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+...|+.....++..+--.+ .+...+...++...+++.|++|+|||...+.+.+.+
T Consensus 61 ~~~~y~~~~~~~~~PHif~vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 61 IINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp HHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44556555444443333222 244455566666679999999999999999998877
No 272
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=92.48 E-value=0.082 Score=46.46 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=18.4
Q ss_pred CeEEEECCCCCcHHHHHH-HHHHHHcc
Q 021660 75 PHLLLYGPPGTGKTSTIL-AVARKLYG 100 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~-~l~~~~~~ 100 (309)
.++++.|.||+|||+.+- .++..+..
T Consensus 25 ~~~lV~A~AGSGKT~~lv~ri~~ll~~ 51 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVLTHRIAYLMAE 51 (623)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCchHHHHHHHHHHHHHHHc
Confidence 348888999999997774 45544443
No 273
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=92.37 E-value=0.092 Score=47.71 Aligned_cols=54 Identities=19% Similarity=0.294 Sum_probs=35.8
Q ss_pred hhcCCCCccccccChHHH--HHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 45 EKYRPQSLADVAAHRDIV--DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 45 ~~~~p~~~~~~ig~~~~~--~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..|+.....++..+--.+ .+...++..++...++++|++|+|||...+.+.+.+
T Consensus 92 ~~y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 92 LAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp HHTTTCCTTSSCSCHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCcHHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 345444444443333322 244555566666679999999999999999888887
No 274
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.28 E-value=0.058 Score=40.87 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=28.1
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEec
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNA 112 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~ 112 (309)
.+..|..|+||||++..+|..+...+....++..+.
T Consensus 5 av~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~ 40 (232)
T d1hyqa_ 5 TVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 40 (232)
T ss_dssp EEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 455689999999999999999977666665555544
No 275
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=92.05 E-value=0.093 Score=47.62 Aligned_cols=55 Identities=24% Similarity=0.343 Sum_probs=36.4
Q ss_pred hhcCCCCccccccChHHH--HHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHc
Q 021660 45 EKYRPQSLADVAAHRDIV--DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 45 ~~~~p~~~~~~ig~~~~~--~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
+.|+.....++..+--.+ .+...+...++...+++.|++|+|||..++.+.+.+.
T Consensus 90 ~~y~~~~~~~~~PHiyavA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 90 AKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLA 146 (789)
T ss_dssp HHHTTCCGGGSCCCHHHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCcHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 445544444443333222 2445555566656699999999999999999888873
No 276
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.68 E-value=0.092 Score=33.44 Aligned_cols=40 Identities=13% Similarity=0.207 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCCHHHHHHHhh
Q 021660 268 KDIEQISYWLLNESFADSFKRISEMKMRKGLALVDIVREVT 308 (309)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~l~ 308 (309)
+.+..+++.+.++++..+...+.+++ ..|.+..+|+.+|.
T Consensus 4 ~~i~~il~~~~~~~f~~a~~~i~~l~-~~Gys~~dIl~~l~ 43 (91)
T d1sxjd1 4 DILIEIVEKVKSGDFDEIKKYVNTFM-KSGWSAASVVNQLH 43 (91)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHH-HTSCCCTTHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH-HcCCCHHHHHHHHH
Confidence 45789999999999999999999998 78999999999885
No 277
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=91.42 E-value=0.035 Score=44.81 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHHHc
Q 021660 77 LLLYGPPGTGKTSTILAVARKLY 99 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~ 99 (309)
|.|-|+-|+||||+++.+++.+.
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC---
T ss_pred EEEECCcCCCHHHHHHHHHHHhC
Confidence 78999999999999999988763
No 278
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.32 E-value=2.2 Score=34.03 Aligned_cols=41 Identities=17% Similarity=0.360 Sum_probs=28.0
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCccc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKI 184 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l 184 (309)
...+|++|=.+.+.......+..+.+. ..++|++-|..++.
T Consensus 121 D~allVVda~eGv~~qT~~~~~~a~~~---~~p~i~viNKiDr~ 161 (341)
T d1n0ua2 121 DGALVVVDTIEGVCVQTETVLRQALGE---RIKPVVVINKVDRA 161 (341)
T ss_dssp SEEEEEEETTTBSCHHHHHHHHHHHHT---TCEEEEEEECHHHH
T ss_pred CceEEEEecccCcchhHHHHHHHHHHc---CCCeEEEEECcccc
Confidence 567999999999888776666666553 34455555665543
No 279
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.25 E-value=0.11 Score=39.54 Aligned_cols=24 Identities=38% Similarity=0.379 Sum_probs=18.8
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++++.+|+|+|||..+...+...
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~ 82 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFL 82 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHH
Confidence 459999999999998766555544
No 280
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=90.95 E-value=0.041 Score=43.79 Aligned_cols=23 Identities=30% Similarity=0.494 Sum_probs=19.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.-+|+||.|+|||+++.++.-.+
T Consensus 26 lnvlvG~NgsGKS~iL~Ai~~~l 48 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNIIDAIKWVF 48 (308)
T ss_dssp EEEEECCTTTCSTHHHHHHHHTS
T ss_pred eEEEECCCCCcHHHHHHHHHHHh
Confidence 36999999999999999886543
No 281
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=90.92 E-value=2.7 Score=32.41 Aligned_cols=24 Identities=17% Similarity=0.083 Sum_probs=21.5
Q ss_pred CeEEEECCCCCcHHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++-|.|..|+|||||+.++....
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~ 30 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYT 30 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhc
Confidence 469999999999999999998765
No 282
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=90.91 E-value=1.2 Score=32.55 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=20.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++.+.|-.+.|||||+.++...+
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~~~ 27 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKIL 27 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHH
Confidence 38999999999999999997653
No 283
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.31 E-value=0.068 Score=44.44 Aligned_cols=22 Identities=32% Similarity=0.545 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
-+|+||.|+|||+++.++.-.+
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~l 49 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVL 49 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6899999999999999997544
No 284
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.30 E-value=0.07 Score=44.40 Aligned_cols=22 Identities=27% Similarity=0.407 Sum_probs=19.8
Q ss_pred CeEEEECCCCCcHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~ 96 (309)
-++.|.|.||+|||+++.++..
T Consensus 57 l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 3599999999999999999974
No 285
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.14 E-value=0.11 Score=39.24 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=26.9
Q ss_pred EEEE-CCCCCcHHHHHHHHHHHHccCcccccEEEEe
Q 021660 77 LLLY-GPPGTGKTSTILAVARKLYGAQYHNMILELN 111 (309)
Q Consensus 77 ~ll~-G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~ 111 (309)
+.++ +..|+||||++..++..+...+..+.++..+
T Consensus 5 Iav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4444 7889999999999999997766665555544
No 286
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=89.55 E-value=1.8 Score=33.70 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=28.2
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhh
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPAL 188 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l 188 (309)
...+||+||+|.+.... ......+.......+++++++....-+..+
T Consensus 192 ~~~~vI~DEaH~ikn~~-s~~~~a~~~l~~~~rllLTGTPi~N~~~dl 238 (298)
T d1z3ix2 192 KVGLVICDEGHRLKNSD-NQTYLALNSMNAQRRVLISGTPIQNDLLEY 238 (298)
T ss_dssp CCCEEEETTGGGCCTTC-HHHHHHHHHHCCSEEEEECSSCSGGGGGGC
T ss_pred ceeeeeccccccccccc-chhhhhhhccccceeeeecchHHhhhhHHH
Confidence 45689999999986422 222333444455667777776655444433
No 287
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=89.52 E-value=0.55 Score=38.83 Aligned_cols=65 Identities=20% Similarity=0.249 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhh
Q 021660 58 HRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFA 129 (309)
Q Consensus 58 ~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (309)
|+.+++.+.+-+..+. ...+|.|-+|+|||.++..+++.. +..++.+.... .....+.+.+..+.
T Consensus 16 QP~aI~~l~~~l~~g~-~~q~l~GltGS~ka~~iA~l~~~~-----~rp~LVVt~n~-~~A~qL~~dL~~~l 80 (413)
T d1t5la1 16 QPQAIAKLVDGLRRGV-KHQTLLGATGTGKTFTISNVIAQV-----NKPTLVIAHNK-TLAGQLYSELKEFF 80 (413)
T ss_dssp HHHHHHHHHHHHHHTC-SEEEEEECTTSCHHHHHHHHHHHH-----TCCEEEECSSH-HHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhcCC-CcEEEeCCCCcHHHHHHHHHHHHh-----CCCEEEEeCCH-HHHHHHHHHHHHHc
Confidence 6777888888887664 448899999999999999999987 33444444443 44555666666554
No 288
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=89.39 E-value=2.9 Score=34.26 Aligned_cols=65 Identities=18% Similarity=0.233 Sum_probs=45.8
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHhh
Q 021660 58 HRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFA 129 (309)
Q Consensus 58 ~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (309)
++++++.+.+.+..+. ....|.|.+|++|+.++..+++.. +..++.+... ......+...+..+.
T Consensus 13 qp~aI~~l~~~L~~g~-~~~~L~GlsgS~ka~~~A~l~~~~-----~rp~LvVt~~-~~~A~~l~~dL~~~l 77 (408)
T d1c4oa1 13 QPKAIAGLVEALRDGE-RFVTLLGATGTGKTVTMAKVIEAL-----GRPALVLAPN-KILAAQLAAEFRELF 77 (408)
T ss_dssp HHHHHHHHHHHHHTTC-SEEEEEECTTSCHHHHHHHHHHHH-----TCCEEEEESS-HHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHHHHHHHHh-----CCCEEEEeCC-HHHHHHHHHHHHHhc
Confidence 5667888888888654 337999999999999999999987 3344444433 345556666666654
No 289
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=89.11 E-value=0.066 Score=42.60 Aligned_cols=18 Identities=33% Similarity=0.530 Sum_probs=15.5
Q ss_pred eEEEECCCCCcHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILA 93 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~ 93 (309)
..+|+|.+|||||||...
T Consensus 16 valffGLSGTGKTTLs~~ 33 (318)
T d1j3ba1 16 VAVFFGLSGTGKTTLSTD 33 (318)
T ss_dssp EEEEEECTTSCHHHHTCB
T ss_pred EEEEEccCCCCccccccC
Confidence 489999999999998653
No 290
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=88.72 E-value=0.1 Score=42.06 Aligned_cols=26 Identities=35% Similarity=0.522 Sum_probs=19.1
Q ss_pred HHHhcCCCCeEEEECCCCCcHHHHHH
Q 021660 67 RLTSENRLPHLLLYGPPGTGKTSTIL 92 (309)
Q Consensus 67 ~~~~~~~~~~~ll~G~~G~GKT~l~~ 92 (309)
..+..+....++-||..|+|||+++.
T Consensus 78 ~~~~~G~n~~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 78 DLYENGCVCSCFAYGQTGSGKTYTML 103 (330)
T ss_dssp HHHHHCCEEEEEEECCTTSSHHHHHH
T ss_pred HHHhcCCCeEEEeeeccccccceeee
Confidence 44444544449999999999999864
No 291
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=88.54 E-value=0.087 Score=41.72 Aligned_cols=23 Identities=30% Similarity=0.476 Sum_probs=18.2
Q ss_pred EecCCChHHHHHHHHHHHHHcCC
Q 021660 196 RFAPLEPVHVTERLKHVIEAEGL 218 (309)
Q Consensus 196 ~~~~~~~~~~~~~l~~~~~~~~~ 218 (309)
.|-+..+....++|..++++.+.
T Consensus 185 PFl~~~p~~ya~lL~~ki~~~~~ 207 (313)
T d2olra1 185 AFLSLHPTQYAEVLVKRMQAAGA 207 (313)
T ss_dssp GGCSSCHHHHHHHHHHHHHHHTC
T ss_pred ccccccHHHHHHHHHHHHHhcCC
Confidence 46778888899999988887653
No 292
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=87.98 E-value=2 Score=28.31 Aligned_cols=74 Identities=12% Similarity=0.243 Sum_probs=45.4
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcc--cchhhhcceeEEEecCCChHHHHHHHHHHHHHc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK--IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAE 216 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~--l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 216 (309)
.+.++++|= .++....-.+...+...+...++|++|..... ....+..-+.-+-.+|.+.+++...++..+++.
T Consensus 45 ~~dlillD~--~mp~~~g~~~~~~lr~~~~~~piI~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~r~ 120 (122)
T d1kgsa2 45 PFDVVILDI--MLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRK 120 (122)
T ss_dssp CCSEEEEES--CCSSSCHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred Ccccccccc--ccccchhHHHHHHHHhcCCCCcEEEEcCCCCHHHHHHHHHcCCceeecCCCCHHHHHHHHHHHHHHh
Confidence 467899993 23322233444555555556677777654432 223333334667788999999998888777653
No 293
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.68 E-value=0.22 Score=39.95 Aligned_cols=22 Identities=32% Similarity=0.477 Sum_probs=17.4
Q ss_pred cCCCCeEEEECCCCCcHHHHHH
Q 021660 71 ENRLPHLLLYGPPGTGKTSTIL 92 (309)
Q Consensus 71 ~~~~~~~ll~G~~G~GKT~l~~ 92 (309)
.+....++-||+.|+|||+++.
T Consensus 73 ~G~n~~i~aYGqtgSGKTyT~~ 94 (323)
T d1bg2a_ 73 EGYNGTIFAYGQTSSGKTHTME 94 (323)
T ss_dssp TTCCEEEEEECSTTSSHHHHHT
T ss_pred cCCCcceeeecccCCCCceecc
Confidence 4444459999999999999874
No 294
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=87.48 E-value=0.11 Score=41.25 Aligned_cols=17 Identities=35% Similarity=0.567 Sum_probs=15.1
Q ss_pred eEEEECCCCCcHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTIL 92 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~ 92 (309)
..+|.|.+|||||||..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 16 VTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp EEEEECCTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 37899999999999974
No 295
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=86.60 E-value=4.1 Score=29.14 Aligned_cols=20 Identities=25% Similarity=0.288 Sum_probs=18.3
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~ 96 (309)
+-+.|-.+.|||||+.++..
T Consensus 8 IaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 8 IGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHT
T ss_pred EEEEeccCCcHHHHHHHHHh
Confidence 78999999999999999964
No 296
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=85.86 E-value=3.2 Score=27.12 Aligned_cols=73 Identities=14% Similarity=0.276 Sum_probs=44.2
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHHc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAE 216 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 216 (309)
.+.++++|= .++.-..-.+.+.+...+..+ +|+.|.... ....++..-+.-+-.+|.+.+++...++..+++.
T Consensus 44 ~~dliilD~--~mP~~~G~e~~~~ir~~~~~p-iI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrr~ 118 (119)
T d1zh2a1 44 KPDLIILDL--GLPDGDGIEFIRDLRQWSAVP-VIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRH 118 (119)
T ss_dssp CCSEEEEES--EETTEEHHHHHHHHHTTCCCC-EEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEecc--ccCCCCCchHHHHHHhccCCc-EEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHhhh
Confidence 467899984 233222344555566555444 445443332 2334455555677888999999998888877653
No 297
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=85.65 E-value=3.3 Score=26.99 Aligned_cols=71 Identities=11% Similarity=0.261 Sum_probs=42.1
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|= .++....-.+...+...+ ..++|++|.... ....++..-+.-+-.+|.+.+++...++..++
T Consensus 44 ~~dlillD~--~mp~~~G~~~~~~i~~~~-~~pvI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~lr 116 (117)
T d2a9pa1 44 QPDIIILDL--MLPEIDGLEVAKTIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLR 116 (117)
T ss_dssp CCSEEEECS--SCSSSCHHHHHHHHHTTC-CCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEecc--ccCCCCccHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHhC
Confidence 467899983 233222234445555544 455666554333 22334444456677889999999888887664
No 298
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=85.62 E-value=4.9 Score=29.02 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=18.9
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~ 96 (309)
++.+.|....|||||+.++..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 389999999999999999864
No 299
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=85.38 E-value=0.33 Score=39.42 Aligned_cols=21 Identities=29% Similarity=0.526 Sum_probs=16.3
Q ss_pred cCCCCeEEEECCCCCcHHHHH
Q 021660 71 ENRLPHLLLYGPPGTGKTSTI 91 (309)
Q Consensus 71 ~~~~~~~ll~G~~G~GKT~l~ 91 (309)
.+....++-||++|+|||+++
T Consensus 77 ~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 77 NGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp TTCCEEEEEECSTTSSHHHHH
T ss_pred ccCceeEEecccCCCCcceee
Confidence 333334999999999999875
No 300
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=85.17 E-value=1.3 Score=29.43 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=44.5
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++| + .++.-..-.++..+.+..+..++|++|.... ....++..-+.-+-.+|.+.+++...+++.+.+
T Consensus 47 ~~dlii~D-~-~mp~~~G~el~~~l~~~~~~~piI~~t~~~~~~~~~~a~~~Ga~dyl~KP~~~~eL~~~i~~~l~~ 121 (123)
T d1krwa_ 47 TPDVLLSD-I-RMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISH 121 (123)
T ss_dssp CCSEEEEC-C-SSSSSTTHHHHHHHHHHSSSCCEEESCCCSCHHHHHHHHHHTEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEeh-h-hcCCchHHHHHHHHHHhCCCCeEEEEecCCCHHHHHHHHHcCCCeEEeCcCCHHHHHHHHHHHHHc
Confidence 56799999 2 2333222334444544455667777665443 233444444566777888889998888877654
No 301
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=84.36 E-value=0.37 Score=38.83 Aligned_cols=35 Identities=29% Similarity=0.535 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHHh---cCCCCeEEEECCCCCcHHHHHH
Q 021660 58 HRDIVDTIDRLTS---ENRLPHLLLYGPPGTGKTSTIL 92 (309)
Q Consensus 58 ~~~~~~~l~~~~~---~~~~~~~ll~G~~G~GKT~l~~ 92 (309)
++++.+.+...+. .+....++-||+.|+|||+.+.
T Consensus 64 q~~vy~~v~~~v~~~l~G~n~~i~aYGqtgSGKT~T~~ 101 (342)
T d1f9va_ 64 NVDVFKEVGQLVQSSLDGYNVCIFAYGQTGSGKTFTML 101 (342)
T ss_dssp HHHHHHHHHHHHGGGGGTCCEEEEEECCTTSSHHHHHH
T ss_pred HHHHHHHhhhhhcchhcccccceeeeeccCCccccccc
Confidence 5666665554443 2333338999999999998773
No 302
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=84.18 E-value=0.36 Score=38.95 Aligned_cols=21 Identities=38% Similarity=0.504 Sum_probs=16.3
Q ss_pred cCCCCeEEEECCCCCcHHHHH
Q 021660 71 ENRLPHLLLYGPPGTGKTSTI 91 (309)
Q Consensus 71 ~~~~~~~ll~G~~G~GKT~l~ 91 (309)
.+....++-||+.|+|||+++
T Consensus 78 ~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 78 MGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp TTCEEEEEEEECTTSSHHHHH
T ss_pred ccCCceEEeeeeccccceEEe
Confidence 343334999999999999776
No 303
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=83.84 E-value=0.43 Score=38.57 Aligned_cols=21 Identities=33% Similarity=0.566 Sum_probs=16.9
Q ss_pred cCCCCeEEEECCCCCcHHHHH
Q 021660 71 ENRLPHLLLYGPPGTGKTSTI 91 (309)
Q Consensus 71 ~~~~~~~ll~G~~G~GKT~l~ 91 (309)
.+....++-||+.|+|||+++
T Consensus 84 ~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 84 EGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp TTCCEEEEEECSTTSSHHHHH
T ss_pred hccCceeeeeccCCCCCceee
Confidence 343344999999999999987
No 304
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=83.65 E-value=4.3 Score=26.68 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=44.6
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVI 213 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~ 213 (309)
.+.++++|= .++.-..-.+.+.+....+..++|+.|.... ....++..-+.-+-.+|.+.+++...+++.+
T Consensus 47 ~~dlvi~D~--~mp~~~G~e~~~~lr~~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~ 119 (123)
T d1dbwa_ 47 RNGVLVTDL--RMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERAS 119 (123)
T ss_dssp CSEEEEEEC--CSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CCcEEEEec--cCccccchHHHHHHHhcCCCCeEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 467888884 2332223445555665555667777764443 3344555555667778999999988887654
No 305
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=83.47 E-value=4.7 Score=27.03 Aligned_cols=72 Identities=17% Similarity=0.224 Sum_probs=45.7
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|- .++....-.+...+....+..++|++|...+ ....++..-+.-+-.+|.+.+++...+.+.+.
T Consensus 44 ~~dlvilD~--~mp~~~G~e~~~~lr~~~~~~piI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 117 (137)
T d1ny5a1 44 HFNVVLLDL--LLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIE 117 (137)
T ss_dssp CCSEEEEES--BCSSSBHHHHHHHHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHH
T ss_pred ccccchHHH--hhhhhhHHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 467999993 3443333455556665666677777664432 33345544456677789999999888876654
No 306
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.21 E-value=4.4 Score=26.51 Aligned_cols=71 Identities=18% Similarity=0.354 Sum_probs=43.4
Q ss_pred ccEEEEEe-CCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLD-EADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiD-e~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++| +...+. ...+.+.+...+ ..++|++|.... .....+..-+.-+-.+|.+.+++...++..+++
T Consensus 46 ~~dlii~D~~mp~~~---G~~~~~~~r~~~-~~pii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~v~~~l~R 119 (121)
T d1xhfa1 46 DINLVIMDINLPGKN---GLLLARELREQA-NVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 119 (121)
T ss_dssp CCSEEEECSSCSSSC---HHHHHHHHHHHC-CCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCCcc---CcHHHHHHHhcC-CCcEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHhc
Confidence 46789998 233322 234555565554 556666664333 223444444577888999999998888876653
No 307
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=83.08 E-value=1.1 Score=30.56 Aligned_cols=73 Identities=18% Similarity=0.187 Sum_probs=45.7
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC--cccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV--NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~--~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++| + .++.-..-.+++.+....++.++|++|... .....++..-+.-+-.+|.+.+++...+++.+.+
T Consensus 44 ~~dlil~D-~-~mP~~~G~el~~~lr~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~~~~ 118 (140)
T d1qkka_ 44 FAGIVISD-I-RMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 118 (140)
T ss_dssp CCSEEEEE-S-CCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CcchHHHh-h-ccCCCCHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCCCEeecCCCCHHHHHHHHHHHHHH
Confidence 46788888 2 233322334455555555567777766433 3344556555677788899999988888776544
No 308
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=82.70 E-value=4.5 Score=26.30 Aligned_cols=70 Identities=21% Similarity=0.328 Sum_probs=43.0
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHV 212 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~ 212 (309)
.+.++++| + .++....-.+...+....++.++|++|.... ....++..-+.-+-.+|.+.+++.+.+++.
T Consensus 46 ~~dliilD-~-~mp~~~G~e~~~~ir~~~~~~pvi~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~v 117 (118)
T d1u0sy_ 46 KPDIVTMD-I-TMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV 117 (118)
T ss_dssp CCSEEEEE-C-SCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred cCCEEEEe-c-CCCCCCHHHHHHHHHHhCCCCcEEEEEccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 46789998 2 3333333344444554555677777664332 333455555566777899999998887654
No 309
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=82.62 E-value=3.1 Score=24.37 Aligned_cols=55 Identities=9% Similarity=0.163 Sum_probs=40.3
Q ss_pred HHHHHHHcCC-CCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhC
Q 021660 209 LKHVIEAEGL-DVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTG 263 (309)
Q Consensus 209 l~~~~~~~~~-~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~ 263 (309)
++.++...|+ .+++++...|++-..--++.++...-+.-..+ ..+|.++|..++.
T Consensus 12 ik~iAeS~Gi~~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 12 MKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp HHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 4445555699 59999999999988877777777654444333 5789999988764
No 310
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=82.40 E-value=4.7 Score=26.27 Aligned_cols=72 Identities=10% Similarity=0.141 Sum_probs=44.6
Q ss_pred ccEEEEEeC-CCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcc--cchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDE-ADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK--IIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe-~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~--l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++|= ...+. .-.+.+.+....+..++|+.|..... ....+..-+.-+-.+|.+.+++...++..+++
T Consensus 44 ~~dliilD~~mP~~~---G~e~~~~i~~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~lrR 118 (119)
T d2pl1a1 44 IPDIAIVDLGLPDED---GLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 (119)
T ss_dssp CCSEEEECSCCSSSC---HHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred ccceeehhccCCCch---hHHHHHHHHhcCcccceEeeeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 467899984 33332 23344455554556667776654432 33444444566778899999998888877654
No 311
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=82.04 E-value=2.8 Score=27.53 Aligned_cols=74 Identities=18% Similarity=0.356 Sum_probs=47.5
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC--cccchhhhcceeEEEecCCChHHHHHHHHHHHHHc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV--NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAE 216 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~--~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 216 (309)
.+.++++|= .++.-..-.+...+....+...+|++|... .....++..-+.-+-.+|.+.+++...+++.+++.
T Consensus 43 ~~dlillD~--~mP~~~G~~~~~~lr~~~~~~~ii~it~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~r~ 118 (120)
T d1p2fa2 43 AFHVVVLDV--MLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLERE 118 (120)
T ss_dssp CCSEEEEES--BCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeC--cccccchhHHHHHHhhcCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHc
Confidence 367899993 233222344555666555677777766433 23344554455778889999999999988877654
No 312
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=81.83 E-value=0.34 Score=39.43 Aligned_cols=22 Identities=36% Similarity=0.536 Sum_probs=16.8
Q ss_pred cCCCCeEEEECCCCCcHHHHHH
Q 021660 71 ENRLPHLLLYGPPGTGKTSTIL 92 (309)
Q Consensus 71 ~~~~~~~ll~G~~G~GKT~l~~ 92 (309)
.+....++-||+.|+|||+++.
T Consensus 111 ~G~n~tifaYGqTGSGKTyTm~ 132 (362)
T d1v8ka_ 111 EGGKATCFAYGQTGSGKTHTMG 132 (362)
T ss_dssp TTCEEEEEEEESTTSSHHHHHH
T ss_pred hccCceEEeeccCCCCCceeee
Confidence 3333349999999999998874
No 313
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=81.37 E-value=0.24 Score=40.53 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=16.2
Q ss_pred cCCCCeEEEECCCCCcHHHHH
Q 021660 71 ENRLPHLLLYGPPGTGKTSTI 91 (309)
Q Consensus 71 ~~~~~~~ll~G~~G~GKT~l~ 91 (309)
.+....++-||+.|+|||+++
T Consensus 122 ~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 122 DGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp TTCEEEEEEECSTTSSHHHHH
T ss_pred cccceeEEeeccCCCccceEe
Confidence 333334999999999999875
No 314
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.11 E-value=0.6 Score=36.30 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=28.0
Q ss_pred cccChHHHHHHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHH
Q 021660 55 VAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 55 ~ig~~~~~~~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+.-.++.++.|..+ ..+...+-+.||.++|||+|+..+...
T Consensus 15 l~~~~e~l~~l~~~--~~~v~vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 15 LMANPEALKILSAI--TQPMVVVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp EEECHHHHHHHHTC--CSBEEEEEEEEBTTSSHHHHHHHHTTC
T ss_pred EEECHHHHHHHHcC--CCCEEEEEEECCCCCCHHHHHHHHcCC
Confidence 44566666655443 222223888999999999999988764
No 315
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=80.97 E-value=0.46 Score=34.31 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=17.9
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~ 96 (309)
+|++|+.++|||.+|..++.
T Consensus 2 iLVtGGarSGKS~~AE~l~~ 21 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIG 21 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EEEECCCCccHHHHHHHHHh
Confidence 68999999999999998763
No 316
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=80.86 E-value=1.7 Score=36.14 Aligned_cols=24 Identities=42% Similarity=0.403 Sum_probs=18.4
Q ss_pred CeEEEECCCCCcHHHHH-HHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTI-LAVARKL 98 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~-~~l~~~~ 98 (309)
+++++.+.+|||||+++ ..++..+
T Consensus 17 g~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 17 GERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEcCchHHHHHHHHHHHHHH
Confidence 44999999999999765 5555555
No 317
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=80.56 E-value=5.6 Score=25.91 Aligned_cols=73 Identities=14% Similarity=0.229 Sum_probs=42.6
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC--cccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV--NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~--~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++|= .++....-.+...+....+...+|+.+... ......+..-+.-+-.+|.+.+++...++..+++
T Consensus 46 ~~dlillD~--~mp~~~G~~~~~~~r~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~lrR 120 (121)
T d1mvoa_ 46 KPDLIVLDV--MLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRR 120 (121)
T ss_dssp CCSEEEEES--SCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHT
T ss_pred cccEEEecc--cccCCCCchhhhhhhccCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 467899984 222212223344445444455555555332 2233444444567888999999999888877654
No 318
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=80.02 E-value=0.51 Score=38.38 Aligned_cols=17 Identities=47% Similarity=0.763 Sum_probs=14.9
Q ss_pred CeEEEECCCCCcHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTI 91 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~ 91 (309)
..++-||+.|+|||+++
T Consensus 76 ~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeeeccccCCCCccccc
Confidence 34999999999999985
No 319
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=79.34 E-value=1.1 Score=34.87 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=21.5
Q ss_pred CCCeEEEECCCCCcHHHHHHHHHHH
Q 021660 73 RLPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 73 ~~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
..|.+++.|.-++||||++.++...
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCeEEEEcCCCCCHHHHHHHHhCC
Confidence 3455999999999999999999865
No 320
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=78.22 E-value=2.9 Score=25.51 Aligned_cols=58 Identities=5% Similarity=0.013 Sum_probs=43.0
Q ss_pred HHHHHHHHcCCC-CCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhCCC
Q 021660 208 RLKHVIEAEGLD-VTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTGNP 265 (309)
Q Consensus 208 ~l~~~~~~~~~~-~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~~~ 265 (309)
-++++++..|+. ++.++.+.+.+...--++.+.......+..+ +.++.+||..++...
T Consensus 14 ~i~Riar~~Gv~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr~ 74 (82)
T d2huec1 14 AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 74 (82)
T ss_dssp HHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTT
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHhc
Confidence 345556666876 8999999999888777777777666555544 579999999888754
No 321
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=77.52 E-value=1.8 Score=33.08 Aligned_cols=43 Identities=21% Similarity=0.445 Sum_probs=32.7
Q ss_pred ccEEEEEeCCC-CCCHHHHHHHHHHHHHhcCC-ceEEEEecCCcc
Q 021660 141 SVKLVLLDEAD-AMTKDAQFALRRVIEKYTKN-TRFALICNQVNK 183 (309)
Q Consensus 141 ~~~lliiDe~~-~l~~~~~~~l~~~l~~~~~~-~~~i~~~~~~~~ 183 (309)
.+.+++|||++ .|.+..+..|.+++...... ..+|++|+.+.-
T Consensus 225 ~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~~ 269 (292)
T g1f2t.1 225 EISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEEL 269 (292)
T ss_dssp SCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGGG
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHHH
Confidence 56799999975 56788889999999987543 477788776543
No 322
>d1sxjb1 a.80.1.1 (B:231-322) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.40 E-value=0.93 Score=28.51 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=27.0
Q ss_pred HhcCCHHHHHHHHHHHHHhcCCCHHHHHHHhh
Q 021660 277 LLNESFADSFKRISEMKMRKGLALVDIVREVT 308 (309)
Q Consensus 277 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~l~ 308 (309)
+...++.+++..+.+++...|++..+|+.+|.
T Consensus 10 l~~~~f~~a~~~l~~~l~~~Gys~~DIi~~l~ 41 (92)
T d1sxjb1 10 LLASNLEDSIQILRTDLWKKGYSSIDIVTTSF 41 (92)
T ss_dssp HSCSSHHHHHHHHHHTTTTTTCCHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 46778899999998877578999999998875
No 323
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=77.20 E-value=0.95 Score=34.99 Aligned_cols=21 Identities=38% Similarity=0.618 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+.+.|-|.+||||++..+...
T Consensus 115 v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 115 ALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp EEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEecCccchhhhhhhhhcc
Confidence 899999999999999998764
No 324
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=76.65 E-value=0.53 Score=36.98 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+-|.|.|.+||||+..++...
T Consensus 13 iGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 899999999999999999865
No 325
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=76.16 E-value=5.2 Score=30.72 Aligned_cols=44 Identities=20% Similarity=0.378 Sum_probs=35.9
Q ss_pred ccEEEEEeCCCC-CCHHHHHHHHHHHHHhcCCceEEEEecCCccc
Q 021660 141 SVKLVLLDEADA-MTKDAQFALRRVIEKYTKNTRFALICNQVNKI 184 (309)
Q Consensus 141 ~~~lliiDe~~~-l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l 184 (309)
.+.+++|||++. +.+..+..+..+++....+..+|++|..+..+
T Consensus 241 ~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~QviitTHsp~~~ 285 (308)
T d1e69a_ 241 PSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVM 285 (308)
T ss_dssp CCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCTTGG
T ss_pred cCchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHH
Confidence 467999999985 56888899999999888888898888776544
No 326
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=75.09 E-value=8.2 Score=24.93 Aligned_cols=72 Identities=22% Similarity=0.361 Sum_probs=42.4
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++|= .++....-.+.+.+.... ..++|+.|.... ....++..-+.-+-.+|.+.+++...+++.+++
T Consensus 45 ~~dliilD~--~mp~~~g~~~~~~~~~~~-~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrR 118 (120)
T d1zgza1 45 SVDLILLDI--NLPDENGLMLTRALRERS-TVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 118 (120)
T ss_dssp CCSEEEEES--CCSSSCHHHHHHHHHTTC-CCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEeeeh--hhccchhHHHHHHHhccC-CCeEEEEEccCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 467888884 122222223445555544 445555554333 233444444577788899999998888877654
No 327
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=74.92 E-value=8.4 Score=24.94 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=43.3
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHV 212 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~ 212 (309)
.+.++++|= .++.-..-.+.+.+....++.++|++|.... ....++..-+.-+-.+|.+.+++...+++.
T Consensus 45 ~~dlillD~--~mP~~~G~el~~~lr~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~ 116 (119)
T d1peya_ 45 RPDLVLLDM--KIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKY 116 (119)
T ss_dssp CCSEEEEES--CCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred CCCEEEEec--cCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Confidence 467899983 2222223345555665566777777775433 233444444566778899999998888765
No 328
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=74.73 E-value=0.98 Score=35.42 Aligned_cols=24 Identities=25% Similarity=0.624 Sum_probs=21.2
Q ss_pred CCeEEEECCCCCcHHHHHHHHHHH
Q 021660 74 LPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 74 ~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.|.+++.|..++||||++.++...
T Consensus 24 lP~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 24 LPQIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp CCEEEEEECSSSSHHHHHHHHHTS
T ss_pred CCeEEEEeCCCCCHHHHHHHHhCC
Confidence 456999999999999999999864
No 329
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=74.56 E-value=3.8 Score=30.64 Aligned_cols=15 Identities=27% Similarity=0.563 Sum_probs=13.6
Q ss_pred CeEEEECCCCCcHHH
Q 021660 75 PHLLLYGPPGTGKTS 89 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~ 89 (309)
.++++..|+|+|||.
T Consensus 59 ~dvvi~a~TGsGKTl 73 (238)
T d1wrba1 59 RDIMACAQTGSGKTA 73 (238)
T ss_dssp CCEEEECCTTSSHHH
T ss_pred CCEEEECCCCCCcce
Confidence 459999999999996
No 330
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.11 E-value=8.4 Score=25.36 Aligned_cols=71 Identities=11% Similarity=0.200 Sum_probs=42.4
Q ss_pred ccEEEEEeC-CCCCCHHHHHHHHHHHH-HhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDE-ADAMTKDAQFALRRVIE-KYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe-~~~l~~~~~~~l~~~l~-~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|= ...+.. -.+.+.+. ......++|++|.... .....+..-+.-+-.+|.+.+++...+++++.
T Consensus 51 ~~dlillD~~mP~~dG---~el~~~ir~~~~~~~piI~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 125 (128)
T d2r25b1 51 NYNMIFMDVQMPKVDG---LLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFCA 125 (128)
T ss_dssp CCSEEEECSCCSSSCH---HHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCT
T ss_pred CCCEEEEEeCCCCCCH---HHHHHHHHHccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 467899983 333332 33444443 3444555666554332 22334444456778899999999999988754
No 331
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=72.94 E-value=9.9 Score=24.87 Aligned_cols=72 Identities=13% Similarity=0.236 Sum_probs=44.6
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecC--CcccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQ--VNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~--~~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|- .++....-.+...+...++...++++|.. ......++..-+.-+-.+|.+.+++...+++.++
T Consensus 46 ~~dliilD~--~mp~~~G~~~~~~i~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 119 (128)
T d1yioa2 46 QHGCLVLDM--RMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQ 119 (128)
T ss_dssp SCEEEEEES--CCSSSCHHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEeehhh--hcccchhHHHHHHHHhhCCCCeEEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 578999995 23332333445555555555666665533 2334455555567778889999999888877654
No 332
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=72.61 E-value=10 Score=25.01 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=42.9
Q ss_pred ccEEEEEeC-CCCCCHHHHHHHHHHHHHhcCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDE-ADAMTKDAQFALRRVIEKYTKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe-~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++|= ...+. .-.+.+.+...++..++|++|.... .....+..-+.-+-.+|.+.+++...+...+++
T Consensus 52 ~~dlillD~~mP~~d---G~el~~~ir~~~~~~pii~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~r 126 (133)
T d2ayxa1 52 HIDIVLSDVNMPNMD---GYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 126 (133)
T ss_dssp CCSEEEEEESSCSSC---CHHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeccCCCCC---HHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 467899984 22222 2334444555555666666664332 233334444566788899999998888776643
No 333
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=71.91 E-value=6 Score=26.08 Aligned_cols=75 Identities=19% Similarity=0.302 Sum_probs=46.3
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHh--cCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHHc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKY--TKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAE 216 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~--~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 216 (309)
.+.++++|= .++....-.+.+.+... ....++|+.|.... .....+..-+.-+-.+|.+..++...+.+.+++.
T Consensus 49 ~~dlii~D~--~mP~~dG~el~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~l~~~l~r~ 126 (128)
T d1jbea_ 49 GYGFVISDW--NMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKL 126 (128)
T ss_dssp CCCEEEEES--CCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEec--ccccCCHHHHHHHHHhCccCCCCcEEEEECcCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHc
Confidence 467888873 13322334555556532 23556666664433 2334444445667888999999999999888776
Q ss_pred C
Q 021660 217 G 217 (309)
Q Consensus 217 ~ 217 (309)
|
T Consensus 127 ~ 127 (128)
T d1jbea_ 127 G 127 (128)
T ss_dssp T
T ss_pred C
Confidence 5
No 334
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=70.38 E-value=12 Score=24.80 Aligned_cols=86 Identities=16% Similarity=0.250 Sum_probs=49.7
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC--cccchhhhcceeEEEecCCChHHHHHHHHHHHHHcCC
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV--NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGL 218 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~--~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~ 218 (309)
.+.++++|= .++.-..-.+.+.+....+...+|+.|... .....++..-+.-+-.+|.+.+++.+.+++.++.+ .
T Consensus 48 ~~DlvllD~--~mP~~~G~el~~~ir~~~~~~~vivlt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~v~~g~-~ 124 (138)
T d1a04a2 48 DPDLILLDL--NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE-M 124 (138)
T ss_dssp CCSEEEEET--TSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHSC-C
T ss_pred CCCEEEEec--CCCCCCHHHHHHHHHhhCCCCCEEEEEEECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHCCC-C
Confidence 467888883 123222334555555555555565555332 23334554445778888999999999998877543 3
Q ss_pred CCCHHHHHHHH
Q 021660 219 DVTEGGLAALV 229 (309)
Q Consensus 219 ~~~~~~l~~i~ 229 (309)
.+++.....++
T Consensus 125 ~~~~~~~~~la 135 (138)
T d1a04a2 125 VLSEALTPVLA 135 (138)
T ss_dssp CCCTTTHHHHH
T ss_pred cCCHHHHHHHH
Confidence 34555444443
No 335
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=69.03 E-value=1.9 Score=32.08 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.|-...|||||+.++....
T Consensus 12 i~viGHVd~GKSTL~~~Ll~~~ 33 (222)
T d1zunb3 12 FLTCGNVDDGKSTLIGRLLHDS 33 (222)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEEcCCCCCHHHHHHHHHHHc
Confidence 7899999999999999997654
No 336
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=68.10 E-value=12 Score=24.05 Aligned_cols=68 Identities=10% Similarity=0.269 Sum_probs=38.8
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcceeEEEecCCChHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKH 211 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~ 211 (309)
.+.++++|= .++.-..-.+.+.+.+...+.++|++|............. .-+-.+|++.+++...++.
T Consensus 47 ~~dliilD~--~lp~~~G~el~~~ir~~~~~~pii~lt~~~~~~~~~~~~~-~dyl~KP~~~~eL~~~i~~ 114 (118)
T d2b4aa1 47 TCDLLIVSD--QLVDLSIFSLLDIVKEQTKQPSVLILTTGRHELIESSEHN-LSYLQKPFAISELRAAIDY 114 (118)
T ss_dssp SCSEEEEET--TCTTSCHHHHHHHHTTSSSCCEEEEEESCC--CCCCSSSC-EEEEESSCCHHHHHHHHHH
T ss_pred CCCEEEEeC--CCCCCCHHHHHHHHHhcCCCCcEEEEECCccHHHHHhhcC-CCEEECCCCHHHHHHHHHH
Confidence 357899984 2333223445556665555667777765433322222222 2356789999998877764
No 337
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=67.96 E-value=1.8 Score=33.40 Aligned_cols=21 Identities=24% Similarity=0.393 Sum_probs=19.0
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+-|.|-|.+||||+..++.+.
T Consensus 5 ~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 5 CGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 779999999999999988765
No 338
>d1fada_ a.77.1.2 (A:) FADD (Mort1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.73 E-value=11 Score=23.24 Aligned_cols=59 Identities=8% Similarity=0.027 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHhcCCH-HHHHHHHHHHHhh-cCCcCHHHHHhhhCCCChHHHHHHHHH
Q 021660 218 LDVTEGGLAALVRLCNGDM-RKALNILQSTHMA-SQQITEEAVYLCTGNPLPKDIEQISYW 276 (309)
Q Consensus 218 ~~~~~~~l~~i~~~~~g~~-r~~~~~l~~~~~~-~~~i~~~~v~~~~~~~~~~~~~~~~~~ 276 (309)
..+++..++.|.....+|. ..+..+|...... +...|.+.+..++......++.+.++.
T Consensus 31 Lgls~~~I~~I~~~~~~~~~e~~~~mL~~W~~~~g~~at~~~L~~aL~~~~~~d~ae~i~~ 91 (95)
T d1fada_ 31 LKVSEAKMDGIEEKYPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTCRLNLVADLVEE 91 (95)
T ss_dssp TTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHGGGGSHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHcCcHHHHHHHHh
Confidence 3578999999998888886 5677777766543 345677777777766655555444443
No 339
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=67.10 E-value=11 Score=23.45 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=20.8
Q ss_pred CeEEEECCCCCcHHHHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.++.|.|--|+|.+.||+.+.++
T Consensus 9 ~~ihfiGigG~GMs~LA~~L~~~ 31 (96)
T d1p3da1 9 QQIHFIGIGGAGMSGIAEILLNE 31 (96)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhC
Confidence 45999999999999999988877
No 340
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=66.85 E-value=1.4 Score=34.65 Aligned_cols=21 Identities=24% Similarity=0.347 Sum_probs=17.8
Q ss_pred EEEECCCCCcHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+-|.|.|.+|||||..++-..
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 568999999999999999554
No 341
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=65.36 E-value=5.9 Score=27.21 Aligned_cols=48 Identities=10% Similarity=0.209 Sum_probs=28.3
Q ss_pred CCeEEEECCCC-CcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHh
Q 021660 74 LPHLLLYGPPG-TGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDF 128 (309)
Q Consensus 74 ~~~~ll~G~~G-~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
+.++.+.|.+| +|+++| .+.++. ...+.++-+.+.. ..+.+.+....+
T Consensus 2 pK~I~IlGsTGSIG~~tL--~Vi~~~---~d~f~v~~lsa~~--N~~~L~~q~~ef 50 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTL--DLIERN---LDRYQVIALTANR--NVKDLADAAKRT 50 (150)
T ss_dssp CEEEEEETTTSHHHHHHH--HHHHHT---GGGEEEEEEEESS--CHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHH--HHHHcC---CCCcEEEEEEeCC--CHHHHHHHHHhh
Confidence 45699999999 466665 344443 1234555555554 445555555554
No 342
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=64.40 E-value=2.4 Score=31.41 Aligned_cols=22 Identities=18% Similarity=0.329 Sum_probs=19.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
++.+.|--+.|||||+.++...
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~~ 26 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMD 26 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHH
Confidence 3889999999999999988654
No 343
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=61.01 E-value=5.1 Score=31.02 Aligned_cols=42 Identities=21% Similarity=0.472 Sum_probs=31.5
Q ss_pred ccEEEEEeCCC-CCCHHHHHHHHHHHHHhcCC-ceEEEEecCCc
Q 021660 141 SVKLVLLDEAD-AMTKDAQFALRRVIEKYTKN-TRFALICNQVN 182 (309)
Q Consensus 141 ~~~lliiDe~~-~l~~~~~~~l~~~l~~~~~~-~~~i~~~~~~~ 182 (309)
.+.+++|||.+ .|.+..+..+.++|...... ..+|++|+.+.
T Consensus 302 ~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~~~QviitTHs~~ 345 (369)
T g1ii8.1 302 EISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEE 345 (369)
T ss_dssp SCSEEEEECCSSSSCSHHHHHHHHHHHHTGGGSSEEEEEESCGG
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEechHH
Confidence 45699999986 45678888999999986543 36777777654
No 344
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=60.73 E-value=13 Score=23.96 Aligned_cols=72 Identities=14% Similarity=0.315 Sum_probs=44.2
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYT--KNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|-- ++.-..-.+...+...+ ...++|+.|.... ...+.+..-+.-+-.+|.+.+++...++..++
T Consensus 44 ~~dlil~D~~--mp~~~G~~l~~~lr~~~~~~~~pvi~lt~~~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~v~~~lr 119 (121)
T d1zesa1 44 WPDLILLDWM--LPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 119 (121)
T ss_dssp CCSEEEECSS--CTTSCHHHHHHHHHHSTTTTTSCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEeecC--CCCCCHHHHHHHHHhCccCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 5779999842 23222344555565432 3566777664433 23344444556778889999999888887664
No 345
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.53 E-value=3.2 Score=31.16 Aligned_cols=23 Identities=22% Similarity=0.314 Sum_probs=20.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++.+.|-.+.|||||+.++....
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~~ 30 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKC 30 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHc
Confidence 48999999999999999987654
No 346
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=60.26 E-value=22 Score=24.18 Aligned_cols=47 Identities=23% Similarity=0.337 Sum_probs=27.5
Q ss_pred CeEEEECCCC-CcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHHHHHh
Q 021660 75 PHLLLYGPPG-TGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDF 128 (309)
Q Consensus 75 ~~~ll~G~~G-~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
..+.+.|.+| +|+++| . +.++. .....+.-+.+.. ..+.+.+....+
T Consensus 2 K~I~IlGsTGSIG~~tL-~-Vi~~~---~d~f~v~~Lsa~~--N~~~L~~q~~~f 49 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTL-D-VVRHN---PEHFRVVALVAGK--NVTRMVEQCLEF 49 (151)
T ss_dssp EEEEEETTTSHHHHHHH-H-HHHHC---TTTEEEEEEEESS--CHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHH-H-HHHhC---CCCcEEEEEEecC--cHHHHHHHHHHH
Confidence 3589999999 466666 3 33443 1234455555543 446666666665
No 347
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=56.48 E-value=15 Score=21.00 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=43.4
Q ss_pred CChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhCC
Q 021660 200 LEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTGN 264 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~~ 264 (309)
+|..-+..+++.- ....++.++...+.+.+.-.+..+.......+..+ +.|+.+||..++..
T Consensus 4 LP~a~I~ri~k~~---~~~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 4 LPIAPIGRIIKNA---GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 67 (68)
T ss_dssp SCHHHHHHHHHHT---TCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHT
T ss_pred CcHHHHHHHHHHC---CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 4555555555542 12368999999999998877777777666555544 57999999887643
No 348
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=55.30 E-value=2.8 Score=31.60 Aligned_cols=23 Identities=13% Similarity=0.134 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
++.+.|-.+.|||||+.++....
T Consensus 26 Ni~iiGHVD~GKSTL~~~Ll~~~ 48 (245)
T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLT 48 (245)
T ss_dssp EEEEEECGGGTHHHHHHHHHHHT
T ss_pred EEEEEeeCCCCHHHHHHHHHHHc
Confidence 48899999999999999996544
No 349
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.80 E-value=7.8 Score=31.09 Aligned_cols=41 Identities=20% Similarity=0.279 Sum_probs=30.9
Q ss_pred cEEEEEeCCCC-CCHHHHHHHHHHHHHh-cCCceEEEEecCCc
Q 021660 142 VKLVLLDEADA-MTKDAQFALRRVIEKY-TKNTRFALICNQVN 182 (309)
Q Consensus 142 ~~lliiDe~~~-l~~~~~~~l~~~l~~~-~~~~~~i~~~~~~~ 182 (309)
..+++|||++. |.+.....+.++|... .....+|++|+.+.
T Consensus 355 ~pililDE~d~~Ld~~~~~~~~~~l~~~~~~~~Q~I~iTH~~~ 397 (427)
T d1w1wa_ 355 SPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNT 397 (427)
T ss_dssp CSEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSCHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCCHH
Confidence 34899999986 6677788899988765 34567888886553
No 350
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=53.23 E-value=27 Score=23.00 Aligned_cols=71 Identities=21% Similarity=0.336 Sum_probs=42.1
Q ss_pred ccEEEEEeC-CCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDE-ADAMTKDAQFALRRVIEKYT--KNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe-~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.+|++|= ...+. ...+...+...+ ...+||++|.... .....+..-+.-+-.+|++..++...++..++
T Consensus 45 ~~dlil~D~~~p~~~---G~~~~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr 120 (139)
T d1w25a1 45 LPDIILLDVMMPGMD---GFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR 120 (139)
T ss_dssp CCSEEEEESCCSSSC---HHHHHHHHHHSTTTTTSCEEEEECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred cceeeeeeccccCCC---chHHHHHhhhcccccCCCEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 467888883 22222 334445555432 3555666664332 33445544456678899999999888876654
No 351
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=51.88 E-value=26 Score=22.42 Aligned_cols=72 Identities=14% Similarity=0.255 Sum_probs=41.2
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYT--KNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|= .++.-..-.+.+.+...+ ...++|++|.... .....+..-+.-+-.+|.+.+++...+++.++
T Consensus 45 ~~dlil~D~--~mp~~dG~el~~~ir~~~~~~~iPii~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~ 120 (123)
T d1mb3a_ 45 KPDLILMDI--QLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLE 120 (123)
T ss_dssp CCSEEEEES--BCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred CCCEEEEEe--ccCCCcHHHHHHHHHhCCCcCCCCeEEEEEecCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHh
Confidence 467899983 233323344556665433 3455666654332 22233333456677889999999988887764
No 352
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=51.76 E-value=11 Score=26.94 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=26.7
Q ss_pred HHHHHHhcCCCCeEEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 64 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 64 ~l~~~~~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
.+.+.+++.....+-++|-. ||||+...+++-+...+.
T Consensus 4 ~~~~~l~~~~~~~iAITGTn--GKTTt~~~l~~iL~~~g~ 41 (207)
T d1j6ua3 4 YFRDTLKREKKEEFAVTGTD--GKTTTTAMVAHVLKHLRK 41 (207)
T ss_dssp HHHHHHHHHCCCEEEEECSS--SHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhcCCCEEEEECCC--CHHHHHHHHHHHHHhCCC
Confidence 34445555555668999965 599999999888865443
No 353
>d1w25a2 c.23.1.1 (A:141-293) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=50.43 E-value=22 Score=23.96 Aligned_cols=72 Identities=15% Similarity=0.308 Sum_probs=43.0
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYT--KNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|= .++.-..-.+.+.+...+ ...++|++|...+ .....+..-+.-+-.+|.+.+++...++..++
T Consensus 55 ~~DlillD~--~mP~~dG~el~~~ir~~~~~~~iPiI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~l~ 130 (153)
T d1w25a2 55 PVDLVIVNA--AAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQ 130 (153)
T ss_dssp SCSEEEEET--TCSSSCHHHHHHHHHTSGGGTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEC--ccccccchHHHHHHHhccccccceeEEeecCCCHHHHHHHHhcCcceEEECCCCHHHHHHHHHHHHH
Confidence 467899984 233222344555565322 3556666664433 23344555556678899999998877776654
No 354
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.14 E-value=19 Score=20.09 Aligned_cols=40 Identities=10% Similarity=0.131 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021660 204 HVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTH 247 (309)
Q Consensus 204 ~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~ 247 (309)
+..+-|+.+ =-.++.+++..+.+.++|++..+++.|-.+.
T Consensus 11 e~i~~LkeM----FP~~D~~vI~~VL~a~~G~vd~aid~LL~Ms 50 (59)
T d1wgla_ 11 EDLKAIQDM----FPNMDQEVIRSVLEAQRGNKDAAINSLLQMG 50 (59)
T ss_dssp HHHHHHHHH----CSSSCHHHHHHHHTTTTTCHHHHHHHHHHSS
T ss_pred HHHHHHHHH----CCCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 334445555 3578999999999999999999999876543
No 355
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=48.50 E-value=22 Score=20.59 Aligned_cols=34 Identities=6% Similarity=-0.049 Sum_probs=29.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD 115 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~ 115 (309)
+.+|+.+||+-...++.+.... ++.+.+++....
T Consensus 3 i~iYs~~~C~~C~~ak~~L~~~-----~i~y~~~~i~~~ 36 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAMENR-----GFDFEMINVDRV 36 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTC
T ss_pred EEEEeCCCCccHHHHHHHHHhc-----CceeEEEeecCC
Confidence 7899999999999999999987 777777777654
No 356
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=47.51 E-value=11 Score=24.11 Aligned_cols=46 Identities=9% Similarity=-0.002 Sum_probs=31.3
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCC-CcchHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASD-DRGIDVVRQQIQD 127 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 127 (309)
+.|||-|.|+|+.-+..+.+.. ++.+..++-.. ....+.+...+..
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~-----~i~~~~idy~k~pls~~eL~~ll~~ 48 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEH-----KVAYDFHDYKAVGIDREHLRRWCAE 48 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-----TCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCCeEEEEccccCCCHHHHHHHHHh
Confidence 6899999999999999999885 55555555422 1334455555443
No 357
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.81 E-value=32 Score=23.75 Aligned_cols=70 Identities=11% Similarity=0.097 Sum_probs=42.5
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC--cccchhhhcceeEEEecCCChHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV--NKIIPALQSRCTRFRFAPLEPVHVTERLKHVI 213 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~--~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~ 213 (309)
.+.++++| ++ ++......+.......+ ..++|+.|... ......+..-+.-+-.+|.+.+++...+....
T Consensus 51 ~~Dlvl~D-~~-mp~~~~~~~~~~~~~~p-~~pvI~lta~~~~~~~~~al~~Ga~~yL~KP~~~~~L~~~i~~~~ 122 (189)
T d1qo0d_ 51 PVDVVFTS-IF-QNRHHDEIAALLAAGTP-RTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSAR 122 (189)
T ss_dssp CCSEEEEE-CC-SSTHHHHHHHHHHHSCT-TCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHH
T ss_pred CCCEEEEc-CC-CCCcHHHHHHHHHHcCC-CCCEEEEeccchHHHHHHHHHcCCcEEEEecchhhHHHHHHhhcc
Confidence 45678887 44 45444444555555544 55566655433 33445555555778889999999888776544
No 358
>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}
Probab=40.81 E-value=20 Score=24.05 Aligned_cols=73 Identities=18% Similarity=0.220 Sum_probs=42.7
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYT--KNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++|= .++.-..-.+.+.+...+ .+.++|+.|.... .....+..-+.-+-.+|.+.+++...+++.++.
T Consensus 62 ~pdlillD~--~mP~~~G~el~~~ir~~~~~~~ipiI~lT~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~~ 138 (149)
T d1k66a_ 62 RPAVILLDL--NLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp CCSEEEECS--CCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCeEEccc--cccCCCcHHHHHHHHhccccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 467888883 223222344556665432 3455666554332 233344444566777899999998888877653
No 359
>d1f6va_ a.49.1.1 (A:) C-terminal domain of B transposition protein {Bacteriophage mu [TaxId: 10677]}
Probab=40.76 E-value=7.7 Score=23.85 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=47.5
Q ss_pred eEEEecCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHh--cCCHHHHHHHHHHHHhhc----CCcCHHHHHhhhCCC
Q 021660 193 TRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLC--NGDMRKALNILQSTHMAS----QQITEEAVYLCTGNP 265 (309)
Q Consensus 193 ~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~--~g~~r~~~~~l~~~~~~~----~~i~~~~v~~~~~~~ 265 (309)
..+.+..+..+++..++... ++.- ++....+.+.. +|-+|.+-..|+.++..+ ..++.++|+.+...-
T Consensus 6 kr~~i~k~kk~Di~Aia~AW----~v~d-~~~~k~l~~I~~KpGaLR~l~kTLrLA~M~A~g~g~~v~~~~Ir~A~~~l 79 (91)
T d1f6va_ 6 KRTAINKTKKADVKAIADAW----QING-EKELELLQQIAQKPGALRILNHSLRLAAMTAHGKGERVNEDYLRQAFREL 79 (91)
T ss_dssp CTTCCSSCSGGGTTHHHHSS----TTSS-SHHHHHHHTTSSSCSCHHHHHHHHGGGTCTTCTTSCCSSHHHHHHHHTSS
T ss_pred hhhhhcCCCHHHHHHHHHHh----CCCC-HHHHHHHHHHccCccHHHHHHHHHHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence 33456678888887776644 5553 33345555544 688999999998877654 479999999998754
No 360
>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.49 E-value=39 Score=23.47 Aligned_cols=72 Identities=10% Similarity=0.148 Sum_probs=41.0
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCC--cccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV--NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~--~~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.++++|= .++.-..-.+...+...+. .+||+.|... .....++..-+.-+-.+|.+++++...+...+..
T Consensus 48 ~pDlvllDi--~mP~~dG~e~~~~ir~~~~-~pIi~lTa~~~~~~~~~al~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 121 (190)
T d1s8na_ 48 KPDLVIMDV--KMPRRDGIDAASEIASKRI-APIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSR 121 (190)
T ss_dssp CCSEEEEES--SCSSSCHHHHHHHHHHTTC-SCEEEEEEGGGHHHHHTTGGGSCEEEEEESCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEec--cccCcchHHHHHHHHhcCC-CCEEEEeCCCCHHHHHHHHHcCCCEeccCCCCHHHHHHHHHHHHHh
Confidence 567899982 2332222333444444443 4555555332 2333444444566788899999998888766543
No 361
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=39.77 E-value=16 Score=23.83 Aligned_cols=71 Identities=17% Similarity=0.224 Sum_probs=43.0
Q ss_pred ccEEEEEe-CCCCCCHHHHHHHHHHHHHh--cCCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLD-EADAMTKDAQFALRRVIEKY--TKNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiD-e~~~l~~~~~~~l~~~l~~~--~~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++| +...+. .-.+.+.+... ..+.++|+.|.... .....+..-+.-+-.+|.+.+++...+++.+.
T Consensus 51 ~~dlii~D~~mP~~~---G~el~~~lr~~~~~~~~pii~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~i~~vl~ 126 (129)
T d1p6qa_ 51 PHHLVISDFNMPKMD---GLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVFG 126 (129)
T ss_dssp CCSEEEECSSSCSSC---HHHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHHHHH
T ss_pred CCCeEEeeeecCCCC---hHHHHHHHHhCcccCCCeEEEEEecCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 46788888 333333 34555666542 23566666664332 22233333456677889999999998888764
No 362
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=38.87 E-value=56 Score=24.63 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=46.1
Q ss_pred ccEEEEEeCCCCC-CHHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcceeEE-------EecCCChHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAM-TKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRF-------RFAPLEPVHVTERLKHV 212 (309)
Q Consensus 141 ~~~lliiDe~~~l-~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~~~i-------~~~~~~~~~~~~~l~~~ 212 (309)
.+.++++||.+.- .+..+..+.+++........+|++|..+..+.. ..+...+ .+...+.++..++++..
T Consensus 246 ~~~~~~ide~e~~L~~~~~~~l~~~l~~~~~~~Q~iitTh~~~~~~~--~~~l~~i~~~~~~s~~~~~~~~~~~~~~E~~ 323 (329)
T g1xew.1 246 PAPFYLFDEIDAHLDDANVKRVADLIKESSKESQFIVITLRDVMMAN--ADKIIGVSMRDGVSKVVSLSLEKAMKILEEI 323 (329)
T ss_dssp CCSEEEEESTTTTSCHHHHHHHHHHHHHHTTTSEEEEECCCHHHHHH--CSEEEEEEC--CCCEEEEECHHHHHHHHHHH
T ss_pred ccchhhhhhHHhhcCHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHh--hHhhcCEeeeCCeEEEEEecHHHHHHHHHHH
Confidence 4678999998754 456677888999988888889888865543211 1111111 11233556666666665
Q ss_pred HHHcC
Q 021660 213 IEAEG 217 (309)
Q Consensus 213 ~~~~~ 217 (309)
-++.|
T Consensus 324 ~~~~~ 328 (329)
T g1xew.1 324 RKKQG 328 (329)
T ss_dssp HHHHC
T ss_pred HHhhC
Confidence 55444
No 363
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.40 E-value=41 Score=20.66 Aligned_cols=60 Identities=5% Similarity=-0.017 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHhcCCH-HHHHHHHHHHHhhc-CCcCHHHHHhhhCCCChHHHHHHHHHHh
Q 021660 219 DVTEGGLAALVRLCNGDM-RKALNILQSTHMAS-QQITEEAVYLCTGNPLPKDIEQISYWLL 278 (309)
Q Consensus 219 ~~~~~~l~~i~~~~~g~~-r~~~~~l~~~~~~~-~~i~~~~v~~~~~~~~~~~~~~~~~~~~ 278 (309)
.+++..++.|-....+++ ..+..+|....... ...|.+.+..++......++.+.++.+.
T Consensus 32 gl~~~~I~~I~~~~~~~~~e~~~~mL~~W~~~~g~~at~~~L~~aL~~~~~~dlad~i~~~~ 93 (103)
T d2gf5a1 32 KVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQ 93 (103)
T ss_dssp TCCHHHHHHHHHHSSSCSHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHCCcHHHHHHHHHHH
Confidence 578888999887777764 57777887776533 5567777777776665555555554443
No 364
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.27 E-value=33 Score=20.05 Aligned_cols=64 Identities=9% Similarity=0.098 Sum_probs=45.0
Q ss_pred CChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhCCC
Q 021660 200 LEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTGNP 265 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~~~ 265 (309)
++...+.+++++. ..+-.+++++-+.+.+.+...+.......-+++... +.++..++.-.+.+.
T Consensus 4 l~K~~L~eLv~~i--dp~~~ld~~vee~ll~iADdFV~~V~~~ac~lAKhR~s~~le~kDvql~LeR~ 69 (74)
T d1h3ob_ 4 LTKKKLQDLVREV--DPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQ 69 (74)
T ss_dssp SCHHHHHHHHHHH--CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHhh
Confidence 4566677777766 235578999999999999877777777665555433 567888887666543
No 365
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=37.26 E-value=15 Score=26.28 Aligned_cols=20 Identities=15% Similarity=0.343 Sum_probs=17.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
.++|.|| ||+++.+.+++..
T Consensus 11 pivi~Gp---~K~ti~~~L~~~~ 30 (199)
T d1kjwa2 11 PIIILGP---TKDRANDDLLSEF 30 (199)
T ss_dssp CEEEEST---THHHHHHHHHHHC
T ss_pred CEEEECc---CHHHHHHHHHHhC
Confidence 3889998 5999999999986
No 366
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=37.04 E-value=51 Score=21.63 Aligned_cols=73 Identities=12% Similarity=0.146 Sum_probs=43.0
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYT--KNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEA 215 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 215 (309)
.+.+|++|= .++.-..-.+.+.+...+ .+.+||+.|.... ...+.+..-+.-+-.+|.+.+++...++.....
T Consensus 56 ~pdlIllD~--~mP~~~G~el~~~ir~~~~~~~iPvi~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~l~~~ 132 (144)
T d1i3ca_ 56 RPNLILLDL--NLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIESF 132 (144)
T ss_dssp CCSEEEECS--CCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC--ccccccchHHHHHHHhCcccCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 467899983 233222334555555433 3445666554332 333444444566778899999998888776553
No 367
>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}
Probab=36.04 E-value=52 Score=21.45 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=41.8
Q ss_pred ccEEEEEeC-CCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCc--ccchhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDE-ADAMTKDAQFALRRVIEKYT--KNTRFALICNQVN--KIIPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe-~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~--~l~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|= ...++ .-.+.+.+...+ .+.++|+.|.... ...+++...+.-+-.+|.+.+++...++..++
T Consensus 55 ~pdlillD~~mP~~d---G~el~~~ir~~~~~~~iPvI~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~i~~ 130 (140)
T d1k68a_ 55 RPDLILLDLNLPKKD---GREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp CCSEEEECSSCSSSC---HHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCEEEEeecccccc---ChHHHHHHHhCcccCCCcEEEEeCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 467888883 33332 234455555433 2445666664332 33444544556677889999999888877554
No 368
>d3bula1 a.46.1.1 (A:651-740) Methionine synthase domain {Escherichia coli [TaxId: 562]}
Probab=35.74 E-value=9.1 Score=23.61 Aligned_cols=34 Identities=9% Similarity=0.167 Sum_probs=29.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhcCCCHHHHHH
Q 021660 271 EQISYWLLNESFADSFKRISEMKMRKGLALVDIVR 305 (309)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 305 (309)
.++.+++-.++.+.+.....+.+ ..|.+|.+|+.
T Consensus 11 ErL~~AII~G~~d~v~e~v~~al-~~g~~p~~Ii~ 44 (90)
T d3bula1 11 KRLEYSLVKGITEFIEQDTEEAR-QQATRPCEVIE 44 (90)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHH-HHSSSTTHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHH-HhcchHHHHHH
Confidence 45778888899999999999999 89999998875
No 369
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}
Probab=35.03 E-value=37 Score=26.14 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=31.4
Q ss_pred ChHHHHHHHHHHhcCC-CCeEEEECCCCCcHHHHHHHHHHHH
Q 021660 58 HRDIVDTIDRLTSENR-LPHLLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 58 ~~~~~~~l~~~~~~~~-~~~~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
..+.++.+.+++.... .+.++|+...|.|.|+++..+..-+
T Consensus 195 ~~~~id~~i~~i~~~~~~~~ivvhc~~g~~rt~~~~~~~~~~ 236 (313)
T d2pt0a1 195 TPENIDRFLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDML 236 (313)
T ss_dssp CHHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEECCCCCcHHHHHHHHHHHH
Confidence 4556777777777643 3449999999999999999887665
No 370
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=34.03 E-value=30 Score=20.97 Aligned_cols=22 Identities=18% Similarity=0.265 Sum_probs=19.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHH
Q 021660 76 HLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
.+.|.|-.|+|-+.||+.+.+.
T Consensus 3 ~ihfiGIgG~GMs~LA~~L~~~ 24 (89)
T d1j6ua1 3 KIHFVGIGGIGMSAVALHEFSN 24 (89)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEEeECHHHHHHHHHHHHhC
Confidence 3889999999999998887665
No 371
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=33.49 E-value=22 Score=22.38 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=21.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHH
Q 021660 77 LLLYGPPGTGKTSTILAVARKL 98 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~ 98 (309)
+++.||.-|-|++.+..+.+++
T Consensus 3 iilegpdccfkstvaaklskel 24 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKEL 24 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHH
T ss_pred EEEeCCchhhHHHHHHHHHhhh
Confidence 7899999999999999999998
No 372
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=32.99 E-value=43 Score=21.27 Aligned_cols=72 Identities=14% Similarity=0.267 Sum_probs=40.2
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHH-hcCCceEEEEecC-Cccc-chhhhcceeEEEecCCChHHHHHHHHHHHH
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEK-YTKNTRFALICNQ-VNKI-IPALQSRCTRFRFAPLEPVHVTERLKHVIE 214 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~-~~~~~~~i~~~~~-~~~l-~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 214 (309)
.+.++++|= .++.-..-.+.+.+.. .+..+.+|++|.. .... ...+..-+.-+-.+|.+.+++.+.+++.+.
T Consensus 47 ~~dlillD~--~mP~~dG~e~~~~ir~~~~~~~~ii~~t~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~v~~ 121 (123)
T d1dz3a_ 47 RPDILLLDI--IMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYG 121 (123)
T ss_dssp CCSEEEEES--CCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSCCTTHHHHHHHHHH
T ss_pred CCCEEEEcC--CCCCCCHHHHHHHHHhcCCCCCeEEEEECcCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 467888883 2222112234444443 3444445555533 3222 344444456677889999999888887654
No 373
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=32.42 E-value=40 Score=19.05 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=29.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD 115 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~ 115 (309)
+.+|+.++|+-..-++.+.+.. ++.+..++....
T Consensus 3 v~iYt~~~C~~C~~ak~~L~~~-----~i~~~~~~i~~~ 36 (74)
T d1r7ha_ 3 ITLYTKPACVQCTATKKALDRA-----GLAYNTVDISLD 36 (74)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTC
T ss_pred EEEEeCCCChhHHHHHHHHHHc-----CCceEEEEccCC
Confidence 7899999999999999999986 777777777654
No 374
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.87 E-value=51 Score=21.65 Aligned_cols=68 Identities=12% Similarity=0.098 Sum_probs=47.2
Q ss_pred CChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhCCCChHH
Q 021660 200 LEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTGNPLPKD 269 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~~~~~~~ 269 (309)
+|..-+..+++.-. .+..++.++...+.+.+.-.+..+-..-...+... +.|+.++|..++.......
T Consensus 5 LP~a~I~kI~K~~~--~~~~is~dA~~~i~~a~~~Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~~f~~ 74 (135)
T d1jfib_ 5 IPRAAINKMIKETL--PNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGS 74 (135)
T ss_dssp CCHHHHHHHHHHHS--TTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHTTGG
T ss_pred ccHHHHHHHHhhCC--ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCcHH
Confidence 45566677777654 25689999999999888766655555554444433 5799999999997655433
No 375
>d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=30.57 E-value=39 Score=23.53 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=22.1
Q ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHHccCcc
Q 021660 72 NRLPHLLLYGPPGTGKTSTILAVARKLYGAQY 103 (309)
Q Consensus 72 ~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~ 103 (309)
.+.|.+-++|-. ||||+...+++-+...+.
T Consensus 9 ~~~~vI~VTGT~--GKTTt~~~l~~iL~~~g~ 38 (204)
T d2jfga3 9 AQAPIVAITGSN--GKSTVTTLVGEMAKAAGV 38 (204)
T ss_dssp CCSCEEEEECSS--SHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCC--CHHHHHHHHHHHHHhcCC
Confidence 344668888865 599999999888865443
No 376
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}
Probab=29.83 E-value=85 Score=22.00 Aligned_cols=37 Identities=19% Similarity=0.118 Sum_probs=24.0
Q ss_pred CccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEE
Q 021660 140 ASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALI 177 (309)
Q Consensus 140 ~~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~ 177 (309)
.++.+||+||+=. +..+.....+.+.+..+..+++++
T Consensus 119 ~gk~ViLVDD~I~-TG~T~~aa~~~L~~~ga~~V~~a~ 155 (208)
T d1wd5a_ 119 KGRDVVLVDDGVA-TGASMEAALSVVFQEGPRRVVVAV 155 (208)
T ss_dssp TTSEEEEECSCBS-SCHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCEEEEEcchhh-hhHHHHHHHHHHHhcCCCEEEEee
Confidence 4788999999733 345566777777766555444443
No 377
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.00 E-value=18 Score=29.26 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=31.0
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEecCCcccc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKII 185 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~ 185 (309)
+.+.|+|||++-.++.+...|..+... .+...+.+++.....+.
T Consensus 377 ~~~~ilVDEfQDts~~Q~~ll~~L~~~-~~~~~l~~VGD~kQSIY 420 (485)
T d1w36b1 377 RFPVAMIDEFQDTDPQQYRIFRRIWHH-QPETALLLIGDPKQAIY 420 (485)
T ss_dssp HCSEEEECSGGGCCHHHHHHHHHHHTT-CTTCEEEEEECGGGCCC
T ss_pred cCCeEEecccccCCHHHHHHHHHHHhC-CCCCeEEEEecCcchhc
Confidence 467899999999998776666666554 33555777777665543
No 378
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=28.87 E-value=65 Score=20.31 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=28.6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHhcCCceEEEEec----CCcccchhhhcce
Q 021660 144 LVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN----QVNKIIPALQSRC 192 (309)
Q Consensus 144 lliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~----~~~~l~~~l~~r~ 192 (309)
.+++|-+|+ ++....+.+.++.......+++.+- +...+.+.+.+.+
T Consensus 13 ~iilD~AHN--~~~~~~l~~~l~~~~~~~~~~v~g~~~dKd~~~~l~~l~~~~ 63 (129)
T d2gc6a1 13 LIVIDGAHN--PDGINGLITALKQLFSQPITVIAGILADKDYAAMADRLTAAF 63 (129)
T ss_dssp TEEECCCCS--HHHHHHHHHHHHHHCSSCCEEEECCC----CCSSSSTTTTTC
T ss_pred cEEEECCCC--HHHHHHHhhccccccchhhhhhccccCCccHHHHHHhhhhhC
Confidence 588999997 5667888888877665544444431 2224444555544
No 379
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=28.67 E-value=70 Score=20.94 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=33.2
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCC-cchHHHHHHHHHh
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDD-RGIDVVRQQIQDF 128 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 128 (309)
+.|||-|+|.|+.=|..+.+.. ++.+..++.... ...+.+...+..+
T Consensus 2 i~iY~~p~Cs~srkal~~L~~~-----~i~~~~idy~k~pls~~eL~~ll~~l 49 (138)
T d1j9ba_ 2 ITIYHNPACGTSRNTLEMIRNS-----GTEPTIILYLENPPSRDELVKLIADM 49 (138)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-----TCCCEEECTTTSCCCHHHHHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHC-----CCCeEEEeeccCCCCHHHHHHHHHHc
Confidence 6799999999999999999886 666666665432 3445555555543
No 380
>d1o6da_ c.116.1.3 (A:) Hypothetical protein TM0844 {Thermotoga maritima [TaxId: 2336]}
Probab=28.55 E-value=76 Score=21.00 Aligned_cols=117 Identities=9% Similarity=0.139 Sum_probs=60.0
Q ss_pred EEEECCCCCcHHHHHHHHHHHHccCcccccEEEEecCCCcchHHHHHH-HHHhhhccccccCCCCccEEEEEeCC-CCCC
Q 021660 77 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQ-IQDFASTQSFSFGVKASVKLVLLDEA-DAMT 154 (309)
Q Consensus 77 ~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lliiDe~-~~l~ 154 (309)
++-.|..-..=...+..+.+++. ......++++.............. -..+..... . +..+|++||= ..++
T Consensus 5 Ii~iGK~~~~~~~~i~~Y~kRl~-~~~~~~iielk~~~~~~~~~~~~~E~~~il~~i~----~--~~~~I~LDe~Gk~~s 77 (147)
T d1o6da_ 5 IAVIGKLDGFIKEGIKHYEKFLR-RFCKPEVLEIKRVHRGSIEEIVRKETEDLTNRIL----P--GSFVMVMDKRGEEVS 77 (147)
T ss_dssp EEEESCCCHHHHHHHHHHHHHHT-TTCEEEEEEECCCCCSCHHHHHHHHHHHHHTTCC----T--TCEEEEEEEEEEECC
T ss_pred EEEEeCcCHHHHHHHHHHHHHhc-CCCCceEEEeccccCCCHHHHHHHHHHHHhccCC----C--CCEEEEEecccCCcC
Confidence 45567642111344455556662 234556666655443333332221 112222211 1 5678999984 3444
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEecCCcccchhhhcce-eEEEecCCCh
Q 021660 155 KDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRC-TRFRFAPLEP 202 (309)
Q Consensus 155 ~~~~~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~-~~i~~~~~~~ 202 (309)
......++.-......+ +.++-..++.+.+.+..++ ..+.|.+++-
T Consensus 78 S~~fA~~l~~~~~~g~~--i~FiIGGa~Gl~~~~~~~a~~~lSls~mT~ 124 (147)
T d1o6da_ 78 SEEFADFLKDLEMKGKD--ITILIGGPYGLNEEIFAKAHRVFSLSKMTF 124 (147)
T ss_dssp HHHHHHHHHHHHHHTCC--EEEEECCTTCCCGGGGGGCSEEEECCSSCC
T ss_pred CHHHHHHHHHHHhcCCC--CEEEEECCCCCCHHHHHhcCcEEeCCcCcc
Confidence 44444333333333333 3444445566677888888 7889988884
No 381
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=28.40 E-value=43 Score=23.55 Aligned_cols=27 Identities=22% Similarity=0.261 Sum_probs=20.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHHHccCccc
Q 021660 76 HLLLYGPPGTGKTSTILAVARKLYGAQYH 104 (309)
Q Consensus 76 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~ 104 (309)
.+-++|-. ||||+...+++-+...+..
T Consensus 14 ~I~ITGTn--GKTTt~~~l~~iL~~~~~~ 40 (215)
T d1p3da3 14 GIAVAGTH--GKTTTTAMISMIYTQAKLD 40 (215)
T ss_dssp EEEEESSS--CHHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCC--CHHHHHHHHHHHHHhCCCC
Confidence 48889855 6999999888887554443
No 382
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=28.08 E-value=65 Score=21.54 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=41.4
Q ss_pred CChHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhC
Q 021660 200 LEPVHVTERLKHVIEAEGL-DVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTG 263 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~-~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~ 263 (309)
++..-++.+++ ..|. .++.++...+.+.+.-.+..+.......+..+ ..|+.+||..++.
T Consensus 80 fp~a~IkRi~k----~~g~~ris~dA~~~l~~~~E~fi~~l~~~A~~~a~~~kRkTI~~~DI~~Av~ 142 (151)
T d1f1ea_ 80 FGRATVRRILK----RAGIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQGEDVEKAIT 142 (151)
T ss_dssp CCHHHHHHHHH----HTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred cCHHHHHHHHH----cCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHH
Confidence 34445555554 3455 58999999999988877777666665555544 5699999887764
No 383
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.28 E-value=11 Score=29.66 Aligned_cols=18 Identities=28% Similarity=0.409 Sum_probs=14.6
Q ss_pred eEEEEC--CCCCcHHHHHHH
Q 021660 76 HLLLYG--PPGTGKTSTILA 93 (309)
Q Consensus 76 ~~ll~G--~~G~GKT~l~~~ 93 (309)
...++| |++||||.+|..
T Consensus 18 ~~yvaaAFPSaCGKTnlAMl 37 (363)
T d1khba1 18 KKYLAAAFPSACGKTNLAMM 37 (363)
T ss_dssp EEEEEEECCTTSCHHHHHTC
T ss_pred EEEEEEecCccccchhHHHh
Confidence 366776 999999999874
No 384
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.59 E-value=17 Score=26.70 Aligned_cols=25 Identities=16% Similarity=0.356 Sum_probs=19.2
Q ss_pred CCCCeEEEECCCCCcHHHHHHHHHH
Q 021660 72 NRLPHLLLYGPPGTGKTSTILAVAR 96 (309)
Q Consensus 72 ~~~~~~ll~G~~G~GKT~l~~~l~~ 96 (309)
.+.|+++|.|.|-+|=|.|...+++
T Consensus 3 ~~lP~~~iiG~prsGTT~L~~iL~~ 27 (258)
T d1vkja_ 3 QQLPQTIIIGVRKGGTRALLEMLSL 27 (258)
T ss_dssp ECCCSEEEEECTTSSHHHHHHHHHT
T ss_pred CCCCCEEEECCCCchHHHHHHHHHc
Confidence 3567899999999997777665543
No 385
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=25.36 E-value=54 Score=18.24 Aligned_cols=61 Identities=11% Similarity=0.051 Sum_probs=40.1
Q ss_pred CChHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhC
Q 021660 200 LEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTG 263 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~ 263 (309)
+|..-++.+++.- ....++.++...+.+.+.-.+..+.......+... +.|+.+||..++.
T Consensus 3 LP~a~I~rI~k~~---~~~ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~ 65 (66)
T d1ku5a_ 3 LPIAPVDRLIRKA---GAERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 65 (66)
T ss_dssp SCHHHHHHHHHHT---TCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred CCHHHHHHHHHhC---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 3444455555432 12357889999888888776666666665555444 5699999988764
No 386
>d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.86 E-value=67 Score=23.25 Aligned_cols=20 Identities=25% Similarity=0.388 Sum_probs=15.7
Q ss_pred CeEEEECCCCCcHHHHHHHH
Q 021660 75 PHLLLYGPPGTGKTSTILAV 94 (309)
Q Consensus 75 ~~~ll~G~~G~GKT~l~~~l 94 (309)
+.+++++..|+|.|-+.-++
T Consensus 177 ~PivVHCs~G~gRsg~f~a~ 196 (245)
T d1p15a_ 177 HPITVHCSAGAGRTGTFCAL 196 (245)
T ss_dssp CCEEEESSSSSHHHHHHHHH
T ss_pred CCEEEEcCCCCccccHHHHH
Confidence 34999999999999665443
No 387
>d1ns5a_ c.116.1.3 (A:) Hypothetical protein YbeA {Escherichia coli [TaxId: 562]}
Probab=24.53 E-value=93 Score=20.65 Aligned_cols=58 Identities=16% Similarity=0.196 Sum_probs=35.3
Q ss_pred cEEEEEeCC-CCCCHHHH-HHHHHHHHHhcCCceEEEEecCCcccchhhhcce-eEEEecCCCh
Q 021660 142 VKLVLLDEA-DAMTKDAQ-FALRRVIEKYTKNTRFALICNQVNKIIPALQSRC-TRFRFAPLEP 202 (309)
Q Consensus 142 ~~lliiDe~-~~l~~~~~-~~l~~~l~~~~~~~~~i~~~~~~~~l~~~l~~r~-~~i~~~~~~~ 202 (309)
..+|++||= ..++.... +.|.++.+ ...+. .++-...+.+.+.++.++ ..+.|.+++-
T Consensus 67 ~~~I~LDe~Gk~~sS~~fA~~l~~~~~-~g~~i--~fiIGGa~G~~~~~~~~a~~~lsls~mT~ 127 (153)
T d1ns5a_ 67 NRIVTLDIPGKPWDTPQLAAELERWKL-DGRDV--SLLIGGPEGLSPACKAAAEQSWSLSALTL 127 (153)
T ss_dssp SEEEEEEEEEECCCHHHHHHHHHHHHH-HCSCE--EEEECBTTBCCHHHHHHCSEEECCCSSCC
T ss_pred CeEEEeeccccccChHHHHHHHHHHhh-ccCcE--EEEEEcCCCCCHHHHHhhCcEEecccCCc
Confidence 458999984 33444443 33434433 33343 333445567778888888 7888988874
No 388
>d1h3oa_ a.22.1.3 (A:) TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.98 E-value=49 Score=17.50 Aligned_cols=44 Identities=9% Similarity=0.188 Sum_probs=29.2
Q ss_pred CChHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCHHHHHHHHHHH
Q 021660 200 LEPVHVTERLKHVIEAEGLD-VTEGGLAALVRLCNGDMRKALNILQST 246 (309)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~-~~~~~l~~i~~~~~g~~r~~~~~l~~~ 246 (309)
+....+...+..+.++.|+. +++++...+.-.+.. .+.++++++
T Consensus 3 L~~~~Lq~ri~~I~~k~Gl~e~~~dV~~lISHA~Qe---RLk~lvEKl 47 (50)
T d1h3oa_ 3 LLQAPLQRRILEIGKKHGITELHPDVVSYVSHATQQ---RLQNLVEKI 47 (50)
T ss_dssp SCHHHHHHHHHHHHHTTTCCEECTTHHHHHHHHHHH---HHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHcCCCccCHHHHHHHHHHHHH---HHHHHHHHH
Confidence 34566777888888888985 677877777766653 333444443
No 389
>d1jmxa1 a.3.1.7 (A:2-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Pseudomonas putida [TaxId: 303]}
Probab=23.95 E-value=60 Score=19.28 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=26.7
Q ss_pred cCCChHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Q 021660 198 APLEPVHVTERLKHVIEAEGLDVTEGGLAALVRL 231 (309)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~ 231 (309)
.+.+.+.....+.++....|..++++....|+++
T Consensus 29 ~r~t~~~W~~~V~~M~~~~Ga~l~~~e~~~Iv~Y 62 (84)
T d1jmxa1 29 QRKTPEGWLMSIARMQVMHGLQISDDDRRTLVKY 62 (84)
T ss_dssp CEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 3467889999999998888999998776666554
No 390
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=23.89 E-value=33 Score=24.29 Aligned_cols=34 Identities=21% Similarity=0.488 Sum_probs=20.1
Q ss_pred HHHHHHHhcCCCCeEEE-E---CCCCCcHHHHHHHHHHHH
Q 021660 63 DTIDRLTSENRLPHLLL-Y---GPPGTGKTSTILAVARKL 98 (309)
Q Consensus 63 ~~l~~~~~~~~~~~~ll-~---G~~G~GKT~l~~~l~~~~ 98 (309)
+.+.+.+... ..+++ . |..|+|=+..+..++++.
T Consensus 76 ~~I~~~l~~~--d~vfi~AGlGGgTGtgaapviA~~ake~ 113 (194)
T d1w5fa1 76 EKIREVLQDT--HMVFITAGFGGGTGTGASPVIAKIAKEM 113 (194)
T ss_dssp HHHHHHTTTC--SEEEEEEETTSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCC--CeEEEEEecCCCcccchHHHHHHHHHHc
Confidence 3555555543 22333 3 566677777777777775
No 391
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.71 E-value=54 Score=17.70 Aligned_cols=29 Identities=10% Similarity=0.045 Sum_probs=24.8
Q ss_pred CCCCCHHHHHHHHHHhcCCHHHHHHHHHH
Q 021660 217 GLDVTEGGLAALVRLCNGDMRKALNILQS 245 (309)
Q Consensus 217 ~~~~~~~~l~~i~~~~~g~~r~~~~~l~~ 245 (309)
=-.++.+++..+.+..+|+...+++.|-.
T Consensus 23 FP~~D~~VI~~VL~a~~G~vd~aidaLL~ 51 (54)
T d1mn3a_ 23 FPDMDPSLIEDVCIAKKSRIEPCVDALLS 51 (54)
T ss_dssp CTTSCHHHHHHHHSCSSCSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 34789999999999999999999987744
No 392
>d1o51a_ d.58.5.4 (A:) Hypothetical protein TM0021 {Thermotoga maritima [TaxId: 2336]}
Probab=23.44 E-value=60 Score=20.09 Aligned_cols=36 Identities=11% Similarity=0.145 Sum_probs=20.1
Q ss_pred cChHHHHHHHHHHhcCCC-CeEEEECCCCCcHHHHHH
Q 021660 57 AHRDIVDTIDRLTSENRL-PHLLLYGPPGTGKTSTIL 92 (309)
Q Consensus 57 g~~~~~~~l~~~~~~~~~-~~~ll~G~~G~GKT~l~~ 92 (309)
+.....+.+...++.... +..++-|..|.|.+.-.+
T Consensus 17 ~g~pl~~~iv~~ar~~giaGaTv~rgi~GfG~~~~~h 53 (102)
T d1o51a_ 17 SGKPLFEYLVKRAYELGMKGVTVYRGIMGFGHKRHMH 53 (102)
T ss_dssp TTEEHHHHHHHHHHHTTCSCCEEEECSCCCCC-----
T ss_pred CceEHHHHHHHHHHHCCCCcEEEEeeeeeeCCCCcEe
Confidence 444455555555554433 348999999998876554
No 393
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.09 E-value=72 Score=18.88 Aligned_cols=53 Identities=4% Similarity=-0.060 Sum_probs=37.3
Q ss_pred CCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CCcCHHHHHhhhCCCChHH
Q 021660 217 GLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTGNPLPKD 269 (309)
Q Consensus 217 ~~~~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~~~~~~~~~~ 269 (309)
...++.++...+.+.+.-.+..+-..-...+... +.|+.++|..++......+
T Consensus 19 ~~~is~ea~~~i~~a~e~Fi~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~~~~~ 73 (87)
T d1n1ja_ 19 TGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDS 73 (87)
T ss_dssp TCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTTCGG
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHcCcHh
Confidence 4568999999998888766665555544444333 5699999999987766544
No 394
>d1gg4a1 c.59.1.1 (A:313-447) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=22.78 E-value=46 Score=21.69 Aligned_cols=62 Identities=8% Similarity=0.164 Sum_probs=30.9
Q ss_pred EEecCCCcchHHHHHHHHHhhhccccccCCCCccEEEEEeCCCCCCHHH---HHHHHHHHHHhcCCceEEEEec
Q 021660 109 ELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDA---QFALRRVIEKYTKNTRFALICN 179 (309)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe~~~l~~~~---~~~l~~~l~~~~~~~~~i~~~~ 179 (309)
-++.+.+.+...+...+..+.... +++++|+=++..+.... ...+.+++.... -..+++++.
T Consensus 16 iIdDsYNAnP~Sm~aAl~~l~~~~--------~~ki~vLGdM~ELG~~s~~~H~~l~~~~~~~~-id~v~~vG~ 80 (135)
T d1gg4a1 16 LLDDSYNANVGSMTAAVQVLAEMP--------GYRVLVVGDMAELGAESEACHVQVGEAAKAAG-IDRVLSVGK 80 (135)
T ss_dssp EEECCSCCCHHHHHHHHHHHHHSS--------SEEEEEECCCCCCTTHHHHHHHHHHHHHHHHT-CSEEEEESS
T ss_pred EEecCCcCCHHHHHHHHHHhhccC--------CCceEEEcccccchhhHHHHHHHHHHHHHhhc-CCeEeeech
Confidence 455555566666666665554321 35667776666665433 334444444432 223444444
No 395
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.75 E-value=50 Score=16.97 Aligned_cols=23 Identities=26% Similarity=0.265 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHhcCCHHHHHHHH
Q 021660 221 TEGGLAALVRLCNGDMRKALNIL 243 (309)
Q Consensus 221 ~~~~l~~i~~~~~g~~r~~~~~l 243 (309)
+.+.--.....++||+..+++.|
T Consensus 19 d~~~Ni~AL~~t~GdV~~Aie~L 41 (44)
T d2bwba1 19 DFDRNVAALRRSGGSVQGALDSL 41 (44)
T ss_dssp CHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCHHHHHHHH
Confidence 44444566678899999999876
No 396
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=22.70 E-value=34 Score=24.23 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=20.0
Q ss_pred CCCeEEEECCCCCcHHHHHHHHHHH
Q 021660 73 RLPHLLLYGPPGTGKTSTILAVARK 97 (309)
Q Consensus 73 ~~~~~ll~G~~G~GKT~l~~~l~~~ 97 (309)
+++.++|.|.|-+|=|.|.+.++..
T Consensus 2 ~~~~~~I~g~pRSGTT~L~~~L~~~ 26 (265)
T d1texa_ 2 HPTAYLVLASQRSGSTLLVESLRAT 26 (265)
T ss_dssp CCCEEEEEECTTSTHHHHHHHHHHH
T ss_pred CCCCEEEECCCCChHHHHHHHHHcC
Confidence 4567999999999988887777654
No 397
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=22.69 E-value=46 Score=23.82 Aligned_cols=33 Identities=18% Similarity=0.438 Sum_probs=19.9
Q ss_pred HHHHHHhcCCCCeE-EEE---CCCCCcHHHHHHHHHHHH
Q 021660 64 TIDRLTSENRLPHL-LLY---GPPGTGKTSTILAVARKL 98 (309)
Q Consensus 64 ~l~~~~~~~~~~~~-ll~---G~~G~GKT~l~~~l~~~~ 98 (309)
.+.+.+... ..+ ++. |-.|+|=+.++..++++.
T Consensus 92 ~I~~~l~~~--d~vfi~AGlGGGTGsgaapvia~~ake~ 128 (209)
T d2vapa1 92 EIKAAIQDS--DMVFITCGLGGGTGTGSAPVVAEISKKI 128 (209)
T ss_dssp HHHHHHTTC--SEEEEEEETTSSHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCC--CEEEEEEeCCCCccccHHHHHHHHHHHc
Confidence 555555543 233 333 556677777777777775
No 398
>d2j01f1 c.22.1.1 (F:1-208) Ribosomal protein L4 {Thermus thermophilus [TaxId: 274]}
Probab=22.62 E-value=49 Score=23.62 Aligned_cols=85 Identities=11% Similarity=0.084 Sum_probs=45.7
Q ss_pred ccEEEEEeCCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCCcccchhhhc--ceeEEEecCCChHHHHHHHHHHHHHc
Q 021660 141 SVKLVLLDEADAMTKDAQFALRRVIEKYT--KNTRFALICNQVNKIIPALQS--RCTRFRFAPLEPVHVTERLKHVIEAE 216 (309)
Q Consensus 141 ~~~lliiDe~~~l~~~~~~~l~~~l~~~~--~~~~~i~~~~~~~~l~~~l~~--r~~~i~~~~~~~~~~~~~l~~~~~~~ 216 (309)
...++|+|+++.-.+.+ ..+..+++... ....++++.. .+.+..+.+. .+.++....++.-++ + ...
T Consensus 120 ~~~l~Vvd~~~~~~~KT-K~~~~~L~~l~l~~~~~vl~v~~-~en~~~s~rNi~~v~v~~~~~lNv~dl---L----~~~ 190 (208)
T d2j01f1 120 EGKLLLVEAFAGVNGKT-KEFLAWAKEAGLDGSESVLLVTG-NELVRRAARNLPWVVTLAPEGLNVYDI---V----RTE 190 (208)
T ss_dssp TTCEEEECCCCCCSSCH-HHHHHHHHHHTCCSSSCEEEECS-CHHHHHHHTTCTTEEEECGGGCCHHHH---H----HSS
T ss_pred cCCceeecccccccccc-HHHHHHHHHhccccccceeeccc-hhHHHHHHhCCCCCEEeecCCccHHHH---h----cCC
Confidence 56799999987544433 34455555432 2333444433 2333333221 234455555554444 3 333
Q ss_pred CCCCCHHHHHHHHHHhcC
Q 021660 217 GLDVTEGGLAALVRLCNG 234 (309)
Q Consensus 217 ~~~~~~~~l~~i~~~~~g 234 (309)
.+-++.++++.|.++.+|
T Consensus 191 ~lvit~~Al~~L~erl~G 208 (208)
T d2j01f1 191 RLVMDLDAWEVFQNRIGG 208 (208)
T ss_dssp EEEEEHHHHHHHHHTCC-
T ss_pred cEEEEHHHHHHHHHHhCc
Confidence 556789999998888766
No 399
>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.77 E-value=45 Score=23.68 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=22.4
Q ss_pred HHHHHHHHhcCCCCeEEEE----CCCCCcHHHHHHHHHHHH
Q 021660 62 VDTIDRLTSENRLPHLLLY----GPPGTGKTSTILAVARKL 98 (309)
Q Consensus 62 ~~~l~~~~~~~~~~~~ll~----G~~G~GKT~l~~~l~~~~ 98 (309)
.+.+.+.+... ..++++ |-.|+|=+..+..++++.
T Consensus 76 ~~~I~~~l~~~--d~vfi~AGlGGgTGtGaaPviA~iake~ 114 (198)
T d1rq2a1 76 KDEIEELLRGA--DMVFVTAGEGGGTGTGGAPVVASIARKL 114 (198)
T ss_dssp HHHHHHHHTTC--SEEEEEEETTSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CEEEEEEecCCCCCcchHHHHHHHHHHc
Confidence 44666666543 223333 566788888888888887
No 400
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.54 E-value=38 Score=17.08 Aligned_cols=26 Identities=12% Similarity=0.203 Sum_probs=19.3
Q ss_pred CCCCCHHHHHHHHHHhcCCHHHHHHH
Q 021660 217 GLDVTEGGLAALVRLCNGDMRKALNI 242 (309)
Q Consensus 217 ~~~~~~~~l~~i~~~~~g~~r~~~~~ 242 (309)
...++.+......+.++||+..+++-
T Consensus 13 ~MGF~~~~a~~AL~~~~~N~e~A~~~ 38 (41)
T d1oqya1 13 SMGYERERVVAALRASYNNPHRAVEY 38 (41)
T ss_dssp TTTCCSHHHHHHHHHSCSSTTHHHHT
T ss_pred HcCCCHHHHHHHHHHhCCCHHHHHHH
Confidence 44577777777778888888877764
No 401
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.90 E-value=73 Score=18.11 Aligned_cols=53 Identities=15% Similarity=0.208 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCC-CCHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-----CCcCHHHHHhhhC
Q 021660 208 RLKHVIEAEGLD-VTEGGLAALVRLCNGDMRKALNILQSTHMAS-----QQITEEAVYLCTG 263 (309)
Q Consensus 208 ~l~~~~~~~~~~-~~~~~l~~i~~~~~g~~r~~~~~l~~~~~~~-----~~i~~~~v~~~~~ 263 (309)
++..+++..|+. +++.+...+.+.+- |..-..|+.+..++ ..|+.++|+-++.
T Consensus 6 ~i~~iL~~~GV~~yeprV~~qlLef~y---RYtt~VL~DA~vys~HA~k~~id~dDVkLAi~ 64 (68)
T d1tafa_ 6 VIMSILKELNVQEYEPRVVNQLLEFTF---RYVTSILDDAKVYANHARKKTIDLDDVRLATE 64 (68)
T ss_dssp HHHHHHHHTTCCCBCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHH
T ss_pred HHHHHHHHcCCccccHHHHHHHHHHHH---HHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Confidence 455566666874 67777777777663 34444444333222 5799999887653
No 402
>d1qzma_ c.37.1.20 (A:) ATPase domain of protease Lon (La) {Escherichia coli [TaxId: 562]}
Probab=20.88 E-value=44 Score=20.36 Aligned_cols=49 Identities=12% Similarity=0.156 Sum_probs=30.5
Q ss_pred CCChHHHHHHHHHHH-----HHcC-----CCCCHHHHHHHHHHhc--CCHHHHHHHHHHHH
Q 021660 199 PLEPVHVTERLKHVI-----EAEG-----LDVTEGGLAALVRLCN--GDMRKALNILQSTH 247 (309)
Q Consensus 199 ~~~~~~~~~~l~~~~-----~~~~-----~~~~~~~l~~i~~~~~--g~~r~~~~~l~~~~ 247 (309)
.++.+|-.+|.++++ +..| +.++++++..|++.+. .-+|.+-..+..++
T Consensus 2 GYt~~EK~~Iak~yLiPk~l~~~gl~~~~i~i~~~~l~~iI~~YtrEaGVR~Ler~i~~I~ 62 (94)
T d1qzma_ 2 GYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLC 62 (94)
T ss_dssp CCCHHHHHHHHHHTHHHHHHHHTTCCTTTEEECHHHHHHHHHHHCCCSSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhHHHHHHHhccccccccchHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 355666666655443 3444 4578999999999762 33666666665444
No 403
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.65 E-value=54 Score=16.53 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=20.2
Q ss_pred CCCCCHHHHHHHHHHhcCCHHHHHHHHHH
Q 021660 217 GLDVTEGGLAALVRLCNGDMRKALNILQS 245 (309)
Q Consensus 217 ~~~~~~~~l~~i~~~~~g~~r~~~~~l~~ 245 (309)
|. .+.+.--.....++||+..++..|..
T Consensus 13 GF-~d~~~Ni~AL~~t~Gdv~~Aie~Ll~ 40 (41)
T d2daha1 13 GF-LNREANLQALIATGGDVDAAVEKLRQ 40 (41)
T ss_dssp TC-CCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 53 35555556677889999999998754
No 404
>d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.17 E-value=1e+02 Score=19.58 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=19.1
Q ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHHhc
Q 021660 142 VKLVLLDEADAMTKDAQFALRRVIEKYT 169 (309)
Q Consensus 142 ~~lliiDe~~~l~~~~~~~l~~~l~~~~ 169 (309)
+..+++|-+|. ++....+.+.+....
T Consensus 10 ~~~iilD~AHN--~~a~~~l~~~l~~~~ 35 (137)
T d1o5za1 10 GKMYILDGAHN--PHGAESLVRSLKLYF 35 (137)
T ss_dssp TEEEEECCCCS--HHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHhhh
Confidence 46789999997 556677777777653
No 405
>d1ucra_ a.4.5.45 (A:) Dissimilatory sulfite reductase DsvD {Desulfovibrio vulgaris [TaxId: 881]}
Probab=20.10 E-value=27 Score=20.15 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHhcCCC-----CeEEEECCCCCcHHHH
Q 021660 59 RDIVDTIDRLTSENRL-----PHLLLYGPPGTGKTST 90 (309)
Q Consensus 59 ~~~~~~l~~~~~~~~~-----~~~ll~G~~G~GKT~l 90 (309)
.++++.+..++..+.. ++.-+||-+|.||.+-
T Consensus 37 R~vKK~~~~lV~e~~L~ywSSGSTTMYglkg~Gkq~~ 73 (74)
T d1ucra_ 37 REVKKILTALVNDEVLEYWSSGSTTMYGLKGAGKQAA 73 (74)
T ss_dssp HHHHHHHHHHHHTTSEEEEEETTEEEEEETTHHHHHH
T ss_pred HHHHHHHHHHhccceEEEEcCCCcEEeccCCCCccCC
Confidence 4555566666665532 3478999999999863
Done!