BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021661
MANLYRLTLQQRHRLPPVSTGVSSGYSTCLSCVSGVSKKSDCRRFKASRRLVVGLGAAFC
SQFMTMAGTLGANSLIASARQRGAVEQVLKDVQWPEQFPFKEEDFQRFDESPDSLFYETP
RFVTHIDDPAIAALTKYYSEVFPPSNTPGVSILDLCSSWVSHFPPGYKQDRIVGMGMNEE
ELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGL
AIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPMYV
VYSRKASTA

High Scoring Gene Products

Symbol, full name Information P value
AT4G29590 protein from Arabidopsis thaliana 8.7e-111
AT3G01660 protein from Arabidopsis thaliana 1.9e-37
BA_1534
2-heptaprenyl-1,4-naphthoquinone methyltransferase
protein from Bacillus anthracis str. Ames 0.00030

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021661
        (309 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2134333 - symbol:AT4G29590 species:3702 "Arabi...  1094  8.7e-111  1
TAIR|locus:2084238 - symbol:AT3G01660 "AT3G01660" species...   402  1.9e-37   1
TIGR_CMR|BA_1534 - symbol:BA_1534 "2-heptaprenyl-1,4-naph...   113  0.00030   1


>TAIR|locus:2134333 [details] [associations]
            symbol:AT4G29590 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] InterPro:IPR013216 Pfam:PF08241
            GO:GO:0009507 EMBL:CP002687 EMBL:AL161575 GO:GO:0008168
            EMBL:AL079344 IPI:IPI00536728 PIR:T09922 RefSeq:NP_194688.1
            UniGene:At.3482 ProteinModelPortal:Q9SU88 SMR:Q9SU88 STRING:Q9SU88
            PRIDE:Q9SU88 EnsemblPlants:AT4G29590.1 GeneID:829080
            KEGG:ath:AT4G29590 TAIR:At4g29590 InParanoid:Q9SU88 OMA:IDVFKEM
            PhylomeDB:Q9SU88 ProtClustDB:CLSN2915816 ArrayExpress:Q9SU88
            Genevestigator:Q9SU88 Uniprot:Q9SU88
        Length = 317

 Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
 Identities = 217/299 (72%), Positives = 241/299 (80%)

Query:    15 LPPV--STGVSSGY--STCLSCVSGVSKK-SDCRRFKASRRLVVG-LGAAFCSQFMTMAG 68
             LPP+  STG S     S+ L+  +  SK      R  + RRLV+G  G A       M+G
Sbjct:    15 LPPIFSSTGNSPFLRASSALNLPTTASKPFHSWIRASSRRRLVLGGFGGASLWMNNNMSG 74

Query:    69 TLGANSLIASARQRGA--VEQVLKDVQWPEQFPFKEEDFQRFDESPDSLFYETPRFVTHI 126
               G  S IASARQ     VEQ L  V WPE FPFKEEDFQR+DES DS FYE PRFVTHI
Sbjct:    75 KFGGKSFIASARQTNPSPVEQALNKVDWPETFPFKEEDFQRYDESSDSTFYEAPRFVTHI 134

Query:   127 DDPAIAALTKYYSEVFPPSNTPGVSILDLCSSWVSHFPPGYKQDRIVGMGMNEEELKRNP 186
             DDPAIAALTKYYS+V P S+TPGVSILD+CSSWVSH+PPGY+Q+RIVGMGMNEEELKRNP
Sbjct:   135 DDPAIAALTKYYSKVLPQSDTPGVSILDMCSSWVSHYPPGYRQERIVGMGMNEEELKRNP 194

Query:   187 VLTEYVVQDLNLNPKLPFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAIVSFS 246
             VLTEY+VQDLNLN  LPFEDNSF VITNVVSVDYLTKP+EVFKEM ++LKPGGLA++SFS
Sbjct:   195 VLTEYIVQDLNLNSNLPFEDNSFQVITNVVSVDYLTKPLEVFKEMNRILKPGGLALMSFS 254

Query:   247 NRCFWTKAISIWTSTGDADHVMIVGAYFHYAGGYEPPQAVDISPNPGRSDPMYVVYSRK 305
             NRCF+TKAISIWTSTGDADH +IVG+YFHYAGG+E PQAVDISPNPGRSDPMYVVYSRK
Sbjct:   255 NRCFFTKAISIWTSTGDADHALIVGSYFHYAGGFEAPQAVDISPNPGRSDPMYVVYSRK 313


>TAIR|locus:2084238 [details] [associations]
            symbol:AT3G01660 "AT3G01660" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] [GO:0000023 "maltose metabolic process"
            evidence=RCA] [GO:0016556 "mRNA modification" evidence=RCA]
            [GO:0019252 "starch biosynthetic process" evidence=RCA]
            InterPro:IPR013216 Pfam:PF08241 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AC009325 GO:GO:0008168 EMBL:BT010699
            EMBL:BT012427 IPI:IPI00527721 RefSeq:NP_186815.1 UniGene:At.41245
            ProteinModelPortal:Q9SS89 SMR:Q9SS89 IntAct:Q9SS89 STRING:Q9SS89
            PaxDb:Q9SS89 PRIDE:Q9SS89 EnsemblPlants:AT3G01660.1 GeneID:821098
            KEGG:ath:AT3G01660 TAIR:At3g01660 eggNOG:NOG27425
            HOGENOM:HOG000010386 InParanoid:Q9SS89 OMA:WVSHLPD PhylomeDB:Q9SS89
            ProtClustDB:CLSN2685010 Genevestigator:Q9SS89 Uniprot:Q9SS89
        Length = 273

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 81/195 (41%), Positives = 113/195 (57%)

Query:    96 EQFPFKEEDFQRFDESPDSLFYETPRFVTHIDDPAIAALTKYYSEVFPPSNTPGVSILDL 155
             ++     E   + +  PD  FY  PRFV H+DD  I++LT+ Y     P +T    +LDL
Sbjct:    46 QRLVLNNEGRTKLNADPDREFYSYPRFVNHVDDSFISSLTELYRNRLRPGST----VLDL 101

Query:   156 CSSWVSHFPPGYKQDRIVGMGMNEEELKRNPVLTEYVVQDLNLNPKLPFEDNSFDVITNV 215
              SSWVSH P   K +++VG G+N +EL RNP L  + V+DLN + K  FED  FD +   
Sbjct:   102 MSSWVSHLPEEVKYEKVVGHGLNAQELARNPRLDYFFVKDLNEDQKFEFEDKYFDAVLCS 161

Query:   216 VSVDYLTKPIEVFKEMCQVLKPGGLAIVSFSNRCFWTKAISIWTSTGDADHVMIVGAYFH 275
             V V YL +P +VF E+ +VLKPGG+ IVSFSNR F+ KAI +W    +   + +V  YF 
Sbjct:   162 VGVQYLQQPEKVFAEVYRVLKPGGVLIVSFSNRMFYEKAIRVWRDGTEYSRIQLVVQYFQ 221

Query:   276 YAGGYEPPQAVDISP 290
                G+  P+ +   P
Sbjct:   222 SIEGFTQPEIIRQQP 236


>TIGR_CMR|BA_1534 [details] [associations]
            symbol:BA_1534 "2-heptaprenyl-1,4-naphthoquinone
            methyltransferase" species:198094 "Bacillus anthracis str. Ames"
            [GO:0008168 "methyltransferase activity" evidence=ISS] [GO:0009234
            "menaquinone biosynthetic process" evidence=ISS] InterPro:IPR004033
            InterPro:IPR014122 InterPro:IPR023576 Pfam:PF01209 PROSITE:PS01183
            PROSITE:PS01184 UniPathway:UPA00079 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0008168 eggNOG:COG2226
            HOGENOM:HOG000249463 PANTHER:PTHR10108:SF24 TIGRFAMs:TIGR01934
            GO:GO:0009234 KO:K03183 RefSeq:NP_843985.1 RefSeq:YP_018157.1
            RefSeq:YP_027692.1 ProteinModelPortal:Q81SW0 IntAct:Q81SW0
            DNASU:1086556 EnsemblBacteria:EBBACT00000012541
            EnsemblBacteria:EBBACT00000013891 EnsemblBacteria:EBBACT00000021876
            GeneID:1086556 GeneID:2816029 GeneID:2849837 KEGG:ban:BA_1534
            KEGG:bar:GBAA_1534 KEGG:bat:BAS1423 OMA:DGHEETH
            ProtClustDB:PRK00216 BioCyc:BANT260799:GJAJ-1497-MONOMER
            BioCyc:BANT261594:GJ7F-1559-MONOMER HAMAP:MF_01813
            TIGRFAMs:TIGR02752 Uniprot:Q81SW0
        Length = 237

 Score = 113 (44.8 bits), Expect = 0.00030, P = 0.00030
 Identities = 34/104 (32%), Positives = 52/104 (50%)

Query:   148 PGVSILDLC---SSWVSHFPPGY-KQDRIVGMGMNEEELKRNPVLTEYV----VQDLNLN 199
             PG   LD+C   + W         +Q ++VG+  +E  L       E +    V+ L+ N
Sbjct:    47 PGSKALDVCCGTADWTIALAGAVGEQGKVVGLDFSENMLSVGKQKVEALQLKQVELLHGN 106

Query:   200 P-KLPFEDNSFDVITNVVSVDYLTKPIEVFKEMCQVLKPGGLAI 242
               +LPFEDN+FD +T    +  +   + V KEM +V+KPGG  I
Sbjct:   107 AMELPFEDNTFDYVTIGFGLRNVPDYMHVLKEMTRVVKPGGKVI 150


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      309       309   0.00079  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  238 KB (2129 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.30u 0.09s 26.39t   Elapsed:  00:00:01
  Total cpu time:  26.30u 0.09s 26.39t   Elapsed:  00:00:01
  Start:  Fri May 10 05:55:34 2013   End:  Fri May 10 05:55:35 2013

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