BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021662
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZII3|TPRA1_CHICK Transmembrane protein adipocyte-associated 1 homolog OS=Gallus
gallus GN=TPRA1 PE=2 SV=1
Length = 364
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 31/269 (11%)
Query: 40 ESVRQCHGVLYDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNL 99
E + + +D L+VP VLF ++L+ K+ S I ++Y L+++ ++ +
Sbjct: 46 EDIGKSRVRYWDLLLLVPNVLFFMFLLWKLPSARAKIRVTSSPIFTTFYILVFVVALVGI 105
Query: 100 AWCSLQ-----GWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLART 154
A + + ++ W + F +A L + I +AF ES +S LA T
Sbjct: 106 ARAVVSMTVSASDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSVKRVLAIT 165
Query: 155 FIISGIIVGVDMLLKVIY-----------VFGFGFPLFIDVDSTHRMKWGFWIIHELLLT 203
++S L+++Y ++G G H FW+
Sbjct: 166 AVLSLAYSVTQGTLEILYPDAHLSAEDFNIYGHG--------GRH-----FWLASSCFFF 212
Query: 204 AVYGFILFVHFSKWREK--LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNL 261
VY F++ + + +++ LPSR +FY Y ++ V++ V L +L G+ +
Sbjct: 213 LVYSFVVILPKTPLKDRISLPSRKSFYVYAGILAVLNLVQGLGSALLCVDIIEGLCCVDA 272
Query: 262 TVICYHSLYLPLLYATFLADFFQEENFLL 290
T Y S + PL+Y FL FF E +L
Sbjct: 273 TTFLYFSFFAPLIYVAFLKGFFGSEPKIL 301
>sp|Q4V8X0|TPRA1_DANRE Transmembrane protein adipocyte-associated 1 homolog OS=Danio rerio
GN=tpra1 PE=2 SV=1
Length = 378
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 32/269 (11%)
Query: 50 YDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNL--AWCSLQGW 107
+D L++P V F+++L+ K+ S I +++Y L+++ + + A S+
Sbjct: 59 WDVMLLIPNVAFLVFLMWKLPSARAKIRLTSSPIFVAFYILVFVVAAVGITRAIVSMTVS 118
Query: 108 QCSAG---KEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIIS---GII 161
SA +V W + F +A L + I +AF ES +S LA T ++S I
Sbjct: 119 TSSAATLIDKVLWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITAVLSLAYSIT 178
Query: 162 VGV--------DMLLKVIYVFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVH 213
G + K ++G G H FW+ VY I+ +
Sbjct: 179 QGTLEIRFPDKHLSAKDFNIYGHG--------GRH-----FWLASSCFFFLVYSLIVILP 225
Query: 214 FSKWREK--LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYL 271
+ RE+ LPS+ +FY Y ++ +++ V L +L G+ ++T Y S++
Sbjct: 226 KTPIRERISLPSKRSFYVYSGILALLNLVQGLGSALLCADIIEGLCCVDVTTFLYFSVFA 285
Query: 272 PLLYATFLADFFQEENFLLDNAYYSEMKD 300
PL+Y TFL FF E +L +Y S++ +
Sbjct: 286 PLIYVTFLKGFFGSEPKIL-FSYKSQIDE 313
>sp|Q791F6|TPRA1_RAT Transmembrane protein adipocyte-associated 1 OS=Rattus norvegicus
GN=Tpra1 PE=2 SV=1
Length = 369
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 31/259 (11%)
Query: 50 YDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQ---- 105
+D L++P VLF ++L+ K+ S I I++Y L+++ ++ +A +
Sbjct: 43 WDLLLLIPNVLFFIFLLWKLPLARAKIRVTSSPIFITFYILVFVVALVGIARAVVSMTVS 102
Query: 106 -GWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGV 164
+ ++ W + F +A L + I +AF ES +S LA T ++S
Sbjct: 103 ASDAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVT 162
Query: 165 DMLLKVIY-----------VFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVH 213
L+++Y ++G G FW++ VY ++ +
Sbjct: 163 QGTLEILYPDSHLSAEDFNIYGHG-------------GRQFWLVSSCFFFLVYSLVVILP 209
Query: 214 FSKWREK--LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYL 271
+ +E+ LPSR +FY Y ++ ++ + L +L G+ + T Y S +
Sbjct: 210 KTPLKERVSLPSRRSFYVYAGILATLNLLQGLGSALLCANIIVGLCCVDATTFLYFSFFA 269
Query: 272 PLLYATFLADFFQEENFLL 290
PL+Y FL FF E +L
Sbjct: 270 PLIYVAFLRGFFGSEPKIL 288
>sp|Q99MU1|TPRA1_MOUSE Transmembrane protein adipocyte-associated 1 OS=Mus musculus
GN=Tpra1 PE=2 SV=1
Length = 369
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 31/259 (11%)
Query: 50 YDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQ---- 105
+D L++P VLF ++L+ K+ S I I++Y L+++ ++ +A +
Sbjct: 43 WDLLLLIPNVLFFIFLLWKLPLARAKIRVTSSPIFITFYILVFVVALVGIARAVVSMTVS 102
Query: 106 -GWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGV 164
+ ++ W + F +A L + I +AF ES +S LA T ++S
Sbjct: 103 ASDAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVT 162
Query: 165 DMLLKVIY-----------VFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVH 213
L+++Y ++G G FW++ VY ++ +
Sbjct: 163 QGTLEILYPDSHLSAEDFNIYGHG-------------GRQFWLVSSCFFFLVYSLVVILP 209
Query: 214 FSKWREK--LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYL 271
+ +E+ LPSR +FY Y ++ ++ + L +L G+ + T Y S +
Sbjct: 210 KTPLKERVSLPSRRSFYVYAGILATLNLLQGLGSALLCANIIVGLCCVDATTFLYFSFFA 269
Query: 272 PLLYATFLADFFQEENFLL 290
PL+Y FL FF E +L
Sbjct: 270 PLIYVAFLRGFFGSEPKIL 288
>sp|Q86W33|TPRA1_HUMAN Transmembrane protein adipocyte-associated 1 OS=Homo sapiens
GN=TPRA1 PE=1 SV=1
Length = 373
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 31/259 (11%)
Query: 50 YDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQ---- 105
+D L++P VLF+++L+ K+ S I I++Y L+++ ++ +A +
Sbjct: 46 WDLLLLIPNVLFLIFLLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVS 105
Query: 106 -GWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGV 164
+ ++ W + F +A L + I +AF ES +S LA T ++S
Sbjct: 106 TSNAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLSLAYSVT 165
Query: 165 DMLLKVIY-----------VFGFGFPLFIDVDSTHRMKWGFWIIHELLLTAVYGFILFVH 213
L+++Y ++G G FW++ VY ++ +
Sbjct: 166 QGTLEILYPDAHLSAEDFNIYGHG-------------GRQFWLVSSCFFFLVYSLVVILP 212
Query: 214 FSKWREK--LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYL 271
+ +E+ LPSR +FY Y ++ +++ + L L G+ + T Y S +
Sbjct: 213 KTPLKERISLPSRRSFYVYAGILALLNLLQGLGSVLLCFDIIEGLCCVDATTFLYFSFFA 272
Query: 272 PLLYATFLADFFQEENFLL 290
PL+Y FL FF E +L
Sbjct: 273 PLIYVAFLRGFFGSEPKIL 291
>sp|Q60QP4|U359_CAEBR UPF0359 membrane protein CBG21730 OS=Caenorhabditis briggsae
GN=CBG21730 PE=3 SV=2
Length = 454
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 115/239 (48%), Gaps = 13/239 (5%)
Query: 51 DAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWC------SL 104
DAA+++P +LF+L+L + + KL G S ++ ++ L++++ ++N+ C S+
Sbjct: 78 DAAILIPNLLFLLFLFLKCTSVIRKLQTGNSPVLRAFTLLVYVSTLVNIIRCVYSMTLSM 137
Query: 105 QGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGV 164
+ W ++ F + A + F ++ S L L T ++S V
Sbjct: 138 TDGIEQTVDQTLWIIIKFFYLTAEFCALTFGLLFGHLDNGRSILIALLGTLLVSIPHTAV 197
Query: 165 DMLLKVIYVFGFGFPL-FIDVDSTHRMKWGFWIIHELLLTAVYGFIL---FVHFSKWREK 220
+++++ + PL + D++S + FW++ L VY FI+ V K+ K
Sbjct: 198 QVIVEMKIIDNSWLPLTYFDIESDG--GFVFWVLSSATLALVYFFIMCLPLVCCQKY-TK 254
Query: 221 LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFL 279
LPS +F+ Y ++M ++ + + +L ++ G+ ++ Y LY P++Y TFL
Sbjct: 255 LPSNGSFFIYCMMMVTLNILQSMGAALILFKSSDGLCFVGVSTYVYFVLYPPIIYFTFL 313
>sp|Q18936|U359_CAEEL UPF0359 membrane protein D1046.5 OS=Caenorhabditis elegans
GN=D1046.5 PE=1 SV=2
Length = 458
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 115/239 (48%), Gaps = 13/239 (5%)
Query: 51 DAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWC------SL 104
DA ++VP +LF+L+L++ + KL G S ++ ++ L++++ ++N+ C S+
Sbjct: 79 DAVILVPNILFLLFLILKCGSVIRKLRTGNSPVLRAFTLLVYVSTLVNIIRCAYSMTLSM 138
Query: 105 QGWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIISGIIVGV 164
+ W ++ F + A + F ++ S L L T ++S V
Sbjct: 139 TDGLEQTVDQTLWIIIKFFYLTAEFCALTFGLLFGHLDNGKSILIALLGTLLVSIPHTAV 198
Query: 165 DMLLKVIYVFGFGFPL-FIDVDSTHRMKWGFWIIHELLLTAVYGFIL---FVHFSKWREK 220
+++++ + PL + D+ S + FW+ +L VY FI+ V K+ K
Sbjct: 199 QVIIEMKIIDNSWLPLTYFDIQSDG--GFLFWVFSSAVLALVYFFIMCLPLVCCQKY-TK 255
Query: 221 LPSRPAFYHYVVVMFVVSAVAFLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFL 279
LPS+ +F Y ++M V++ + + +L ++ G+ ++ Y LY P++Y TFL
Sbjct: 256 LPSKGSFLIYCMMMVVLNVLQSMGAALILFKSSDGLCFVGVSTYVYFVLYPPIIYFTFL 314
>sp|B1YIW6|CTAA_EXIS2 Heme A synthase OS=Exiguobacterium sibiricum (strain DSM 17290 /
JCM 13490 / 255-15) GN=ctaA PE=3 SV=1
Length = 297
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 184 VDSTHRMKWGFWI--IHELLLTAVYGFILFVHFSKWREKLPSRPAFYHYVVVMFVVSAVA 241
V S M + W+ IH +L ++ + LFVH++ R L R + + F +S
Sbjct: 192 VCSQPTMTFEAWVQMIHRILAGLLFFYTLFVHYTAIR--LKHRTSRTGMLFATFFISC-- 247
Query: 242 FLVVSLAGTGAAFGIWLYNLTVICYHSLYLPLLYATFLADFFQEENFLLDNAYYSEMKDA 301
A G W+ V+ H+ Y+PLL+A + +F ++L +A+ + KD+
Sbjct: 248 ---------QVATGAWI----VLGGHATYVPLLHAFLITCYFGVISYLAYHAFRTRKKDS 294
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,688,699
Number of Sequences: 539616
Number of extensions: 4396607
Number of successful extensions: 12087
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 12058
Number of HSP's gapped (non-prelim): 43
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)