BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021665
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 128/244 (52%), Gaps = 26/244 (10%)
Query: 9 WCYRCRRPVRLQ---GEDAVCLYCSGGFVQELDDMVSVSPLDFFGLDNDEERDQRLGLME 65
+CY+C + V + D C C+ GF++E +D L+F N D + +
Sbjct: 22 FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNF----NPNSSDSFFPMAD 77
Query: 66 AFSAFVRHRMADRHSH------------DIRGRYDSTPEHGQ--GFGPLLIFGGQIPLRL 111
FS + + ++ + ST ++ Q F P +
Sbjct: 78 PFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLR 137
Query: 112 SGNSGFEAIFGGAPGLGFAR--GNTGDYFIGPGLEELFEQLSAN--GRRGPPPAARSAID 167
S + FE + P R GN GDYF GPGLE+L +QL+ N R G PPA++SAID
Sbjct: 138 SSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAID 197
Query: 168 AMPTVRITQRHLRSD-SHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCR 226
A+PTV++T+ L+S+ + C VC D+FE GS+ +QMPC H++H DC++PWL HNSCPVCR
Sbjct: 198 ALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
Query: 227 QELP 230
ELP
Sbjct: 258 FELP 261
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 9 WCYRCRRPVRLQ----GEDAVCLYCSGGFVQELDDMVSVSPLDFFGLDNDEE--RDQRLG 62
+CY+C R V + D C C+ GF++E D+ F + + D L
Sbjct: 24 FCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLT 83
Query: 63 LMEAFSAFV-------------RHRMADRHSHDIRGRYDSTPEHGQGFGPLLIFGGQIPL 109
L + F++ + D ++ + G S F P +
Sbjct: 84 LSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLND 143
Query: 110 RLSGNSGFEAIFGGAPG-LGF-ARGNTGDYFIGPGLEELFEQLSAN--GRRGPPPAARSA 165
S + E + P GF N GDYFIGPGLE+L +QL+ N R G PPA++SA
Sbjct: 144 LRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSA 203
Query: 166 IDAMPTVRITQRHLRSD-SHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPV 224
I+A+P V IT+ +L S+ + C VC D FE G+EA+QMPC H+YH DC++PWL HNSCPV
Sbjct: 204 IEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 263
Query: 225 CRQELPLQGSSSSRIHQSSSGQSRSTSFGSNGSGRENQGRRNLFSGF-----WPFRS 276
CR ELP R + + G S G N R + R + F WPF++
Sbjct: 264 CRHELPTDDPDYERRVRGAQGTSGGND-GDNSGQRSDGDNRTVERSFRISLPWPFQA 319
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Query: 128 GFARGNTGDYFIGP-GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHC 185
G N DY G GL+ + QL + GPPPA I A+PT++IT+ H+ S C
Sbjct: 168 GVLHSNPMDYAWGANGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLEC 227
Query: 186 PVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSS 237
PVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Q ++++
Sbjct: 228 PVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATN 279
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 123/277 (44%), Gaps = 46/277 (16%)
Query: 9 WCYRCRRPVRLQGEDAVCLYCSGGFVQELDDMVSVSPLDFFG-----LDND--------- 54
+C+ C+ V + + +C C GF++E+ D S F G DN
Sbjct: 21 FCHFCKGEVNPKLPEYICPRCDSGFIEEVTDDSS-----FLGGGGSRTDNSTATHFAELW 75
Query: 55 EERDQRLGLMEAFSAFVRHRMADRHSH-DIRGRYDSTPEHGQGFGPLLIF-------GGQ 106
+ D + ++ F F+ D+ + + RG T G P L G
Sbjct: 76 DHLDHTM-FLQDFRPFLSSNPLDQDNRANERGHQTHTDFWGPSRPPRLPMTRRYRSRGST 134
Query: 107 IPLRLSGNSGF-EAIFGG------APGL-------GFARGNTGDYFIG-PGLEELFEQLS 151
P R G + IF G PG G N GDY G GL+ + QL
Sbjct: 135 RPDRSPAIEGIIQQIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYAWGQTGLDAIVTQLL 194
Query: 152 AN-GRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSD 210
GPPPA + I ++PTV +TQ + + CPVC++ + + + RQ+PCNH +HS
Sbjct: 195 GQLENTGPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSS 254
Query: 211 CIVPWLVQHNSCPVCRQELPLQGSSSSRIHQSSSGQS 247
CIVPWL H++CPVCR+ L G S+R QSS +
Sbjct: 255 CIVPWLELHDTCPVCRKS--LNGEDSTRQTQSSEASA 289
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 128 GFARGNTGDYFIGP-GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHC 185
G N DY G GL+ + QL + GPPPA + I A+PTV +T+ H+ S C
Sbjct: 170 GVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLEC 229
Query: 186 PVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSS 237
PVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Q ++++
Sbjct: 230 PVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATN 281
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Query: 128 GFARGNTGDYFIGP-GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHC 185
G N DY G GL+ + QL + GPPPA I A+PT++IT+ H+ S C
Sbjct: 169 GVLHSNPMDYAWGANGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLEC 228
Query: 186 PVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSS 237
PVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Q ++++
Sbjct: 229 PVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATN 280
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 128 GFARGNTGDYFIGP-GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHC 185
G N DY G GL+ + QL + GPPPA + I A+PTV +T+ H+ S C
Sbjct: 172 GVLHSNPMDYAWGANGLDTIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLEC 231
Query: 186 PVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSS 237
PVC++ + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Q ++++
Sbjct: 232 PVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATN 283
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 128 GFARGNTGDYFIGP-GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHC 185
G N DY G GL+ + QL + GPPPA + I A+PTV +T+ H+ S C
Sbjct: 173 GVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLEC 232
Query: 186 PVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSS 236
PVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Q +++
Sbjct: 233 PVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTAT 283
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Query: 128 GFARGNTGDYFIGP-GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHC 185
G N DY G GL+ + QL + GPPPA I A+PT++IT+ H+ C
Sbjct: 169 GVLHSNPMDYAWGANGLDTIITQLLNQFENTGPPPADTDKIQALPTIQITEEHVGFGLEC 228
Query: 186 PVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSS 237
PVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Q ++++
Sbjct: 229 PVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATN 280
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Query: 128 GFARGNTGDYFIG-PGLEELFEQLSAN-GRRGPPPAARSAIDAMPTVRITQRHLRSDSHC 185
G N GDY G GL+ + QL GPPPA + I ++PTV +TQ + C
Sbjct: 169 GMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLEC 228
Query: 186 PVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIHQSSSG 245
PVC++ + + E RQ+PCNH +HS CIVPWL H++CPVCR+ L G S+R QS S
Sbjct: 229 PVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKS--LNGEDSTR--QSQST 284
Query: 246 QSRSTSFGSNGS 257
++ +++ SN S
Sbjct: 285 EASASNRFSNDS 296
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 155 RRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVP 214
+R PPPAA+ ++++P V +T + CPVC +FE G RQ+PC H++HS CI+P
Sbjct: 49 QRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILP 108
Query: 215 WLVQHNSCPVCRQELP 230
WL + NSCP+CR ELP
Sbjct: 109 WLGKTNSCPLCRHELP 124
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%)
Query: 155 RRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVP 214
+R PPPA++ ++++P V +T + CPVC +FE G RQ+PC H++HS CI+P
Sbjct: 49 QRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILP 108
Query: 215 WLVQHNSCPVCRQELPLQGSSSSRIHQSSS 244
WL + NSCP+CR ELP Q +
Sbjct: 109 WLGKTNSCPLCRHELPTDSPDYEEFKQEKA 138
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 150 LSANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHS 209
LS +R PPPAA++ + ++P V I+ CPVC +FE R+MPC H++H+
Sbjct: 44 LSDWDQRLPPPAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHT 103
Query: 210 DCIVPWLVQHNSCPVCRQELP 230
CI+PWL + NSCP+CR ELP
Sbjct: 104 GCILPWLNKTNSCPLCRLELP 124
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 127 LGFARGNTGDYFIGPGLEELFEQLSANG-------RRGPPPAARSAIDAMPTVRITQRHL 179
L AR G + PG LF ++ PPPAA++ ++++P I+
Sbjct: 25 LELARRVRGAWSWAPGGRSLFNRMDFEDLGLVDWEHHLPPPAAKAVVESLPRTVISSA-- 82
Query: 180 RSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSS 235
++D CPVC +FE +MPC+H++HS+CI+PWL + NSCP+CR ELP S
Sbjct: 83 KADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDS 138
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 115 SGFEAIFGGAPGLGFARGNTGDYF-----IGPGLEELFEQLSANGRRGPP---PAARSAI 166
S F +I GG G G+ + GL+ + + +G GPP PA++ +
Sbjct: 151 SAFASIVGGESSNGPTENTIGETANLMQELINGLDMIIPDILDDG--GPPRAPPASKEVV 208
Query: 167 DAMPTVRITQRHLR---SDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCP 223
+ +P + T+ L+ +++ C +C++ +G + +++PC H +H C+ PWL +HNSCP
Sbjct: 209 EKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCP 268
Query: 224 VCRQELP 230
+CR ELP
Sbjct: 269 ICRHELP 275
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 127 LGFARGNTGDYFIGPGLEELFEQLSANG-------RRGPPPAARSAIDAMPTVRITQRHL 179
L AR G + PG LF ++ PPPAA++ ++++P R R
Sbjct: 25 LELARRVRGAWSWAPGSRSLFNRMDFEDLGLVDWEHHLPPPAAKAVVESLP--RTVIRSS 82
Query: 180 RSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSS 235
+++ CPVC +FE +MPC+H++HS+CI+PWL + NSCP+CR ELP S
Sbjct: 83 KAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDS 138
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 132 GNTGDYFI-GPGLEELFEQLS------ANGRRGPPPAARSAIDAMPTVRITQRHLRSDSH 184
GN DY G E L + L+ GRRG PPAA+SAI+A+ T ++
Sbjct: 197 GNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMV 256
Query: 185 CPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 229
C VC+D +G +++PC H YH DCIVPWL NSCPVCR +L
Sbjct: 257 CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQL 301
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 7 THWCYRCRRPVRLQGED--AVCLYCSGGFVQEL 37
+HWCY C + V ++ D VC C+ GFV+ +
Sbjct: 14 SHWCYHCNKRVVVETLDDFVVCCECNKGFVESI 46
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 158 PPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLV 217
PPPAA++A++ +P R R +++ CPVC +FE A +MPC+H++HS+CI+PWL
Sbjct: 51 PPPAAKTAVENLP--RTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLS 108
Query: 218 QHNSCPVCRQELPLQGSSSSRIHQSSSGQSRSTSFGSNGSG 258
+ NSCP+CR ELP + + + + + N G
Sbjct: 109 KTNSCPLCRHELPTDDDTYEEHKRDKARKQQQKHRLENLHG 149
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 132 GNTGDYFIGP-GLEELFEQL--SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVC 188
GN GDY G GL+++ QL A G P PA I M + + + + C +C
Sbjct: 340 GNPGDYAWGARGLDDIISQLMEQAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEGECTIC 399
Query: 189 QDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIHQSS---SG 245
+ F++ + Q+PC H +H +CI PWL + +C +CR P+ +S R + S+ +G
Sbjct: 400 MEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR--APVDPNSQQRNNTSTDSANG 457
Query: 246 QSRSTSFGSNGSGRENQGRRNLFSGFWPFRSSNSSSNH 283
+ S + S +QG F SN SS H
Sbjct: 458 HNPSNHANPSTSTTNDQGATLRNESFNAASQSNLSSEH 495
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 158 PPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLV 217
PPPAA++ ++ +P R R +++ CPVC +FE A +MPC+H++HS CI+PWL
Sbjct: 51 PPPAAKTVVENLP--RTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLS 108
Query: 218 QHNSCPVCRQELP 230
+ NSCP+CR ELP
Sbjct: 109 KTNSCPLCRYELP 121
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 147 FEQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRSDSHCPVCQDKFELGSEARQMPCN 204
E L+ + PPA++ +IDA+P + +T+ H + + CP+C ++ G A ++PC+
Sbjct: 490 LESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCH 549
Query: 205 HIYHSDCIVPWLVQHNSCPVCRQELP 230
H +H C+ WL + +CPVCR P
Sbjct: 550 HYFHKPCVSIWLQKSGTCPVCRCMFP 575
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 147 FEQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRSDSHCPVCQDKFELGSEARQMPCN 204
E L+ + PPA++ +IDA+P + +T+ H + + CP+C ++ G A ++PC+
Sbjct: 555 LESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCH 614
Query: 205 HIYHSDCIVPWLVQHNSCPVCRQELP 230
H +H C+ WL + +CPVCR P
Sbjct: 615 HYFHKPCVSIWLQKSGTCPVCRCMFP 640
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 36/169 (21%)
Query: 95 QGFGPLLIFGGQIPLRLSGNSGFE-------------AIFGG-APGLGFARGNTGDYFIG 140
+G P F L GN+ E ++F G A GLG A + ++
Sbjct: 513 EGNEPANEFAQPEAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAIS---YVD 569
Query: 141 P------GLEELF-----------EQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRS 181
P LEE E L+ + PPA++ +ID +P + + H +
Sbjct: 570 PQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQ 629
Query: 182 DSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 230
+ CP+C ++ A ++PC+H +H C+ WL + +CPVCR+ P
Sbjct: 630 EQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 678
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 159 PPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQ 218
P A++ AI +P I + D C VC++ E G + R +PC H +H +CI+ WL +
Sbjct: 44 PEASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKK 103
Query: 219 HNSCPVCRQEL 229
NSCP+CR EL
Sbjct: 104 TNSCPLCRYEL 114
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 36/169 (21%)
Query: 95 QGFGPLLIFGGQIPLRLSGNSGFE-------------AIFGG-APGLGFARGNTGDYFIG 140
+G P F L GN+ E ++F G A GLG A + ++
Sbjct: 513 EGNEPANEFAQPEAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAIS---YVD 569
Query: 141 P------GLEELF-----------EQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRS 181
P LEE E L+ + PPA++ +ID +P + + H +
Sbjct: 570 PQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQ 629
Query: 182 DSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 230
+ CP+C ++ A ++PC+H +H C+ WL + +CPVCR+ P
Sbjct: 630 EQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 678
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 147 FEQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRSDSHCPVCQDKFELGSEARQMPCN 204
E L+ + PPA++ +ID +P + + H + + CP+C ++ A ++PC+
Sbjct: 594 LESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCH 653
Query: 205 HIYHSDCIVPWLVQHNSCPVCRQELP 230
H +H C+ WL + +CPVCR+ P
Sbjct: 654 HFFHKPCVSIWLQKSGTCPVCRRHFP 679
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 147 FEQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRSDSHCPVCQDKFELGSEARQMPCN 204
E L+ + PPA++ +ID +P + + H + + CP+C ++ A ++PC+
Sbjct: 594 LESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCH 653
Query: 205 HIYHSDCIVPWLVQHNSCPVCRQELP 230
H +H C+ WL + +CPVCR+ P
Sbjct: 654 HFFHKPCVSIWLQKSGTCPVCRRHFP 679
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 153 NGRRGPPPAARSAI-DAMPTVRITQRHLRSDS----HCPVCQDKFELGSEARQMP-CNHI 206
+G R P RS++ D++P + + RS S C VC KFE + R +P C H
Sbjct: 80 SGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHA 139
Query: 207 YHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIHQSSSGQSRSTSFGSNGSGRENQGRRN 266
+H+DCI WLV + +CP+CR PL S S + + GSN G EN R
Sbjct: 140 FHADCIDIWLVSNQTCPLCRS--PLFASESDLMKSLA-------VVGSNNGGGENSFRLE 190
Query: 267 L 267
+
Sbjct: 191 I 191
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 142 GLEELFEQLSANGRRGPPPAAR-SAIDAMPTVRITQRHLRSDS----HCPVCQDKFELGS 196
++ FE+LS+ G +D +P ++IT ++ S C VC F+LG
Sbjct: 143 AVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGE 202
Query: 197 EARQMP-CNHIYHSDCIVPWLVQHNSCPVCRQEL 229
R +P C+H++H CI WL +H SCP+CR++L
Sbjct: 203 TVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 185 CPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQ-HNSCPVCRQE-LPLQGSSSSRIHQS 242
C +C D++E G + R +PC+H YH C+ PWL + +CPVC+Q+ +P QG S S S
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSS 299
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 181 SDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIH 240
S S C +C +K+ G E R +PC H +H C+ PWL+Q+++CP CR + I
Sbjct: 198 SISDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI---------IE 248
Query: 241 QSSSGQSRSTSFGSNGSGRENQGRRNLFSGFWPFR 275
Q G S GR+ Q +R + +P R
Sbjct: 249 QKKGGHGPGCVENSLSHGRQQQQQRVILPVHYPGR 283
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 161 AARSAIDAMPTVRITQRHLRSD---SHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLV 217
AA+ AI + T + + +D HC VC + ++ R +PC H++H C+ PWL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 218 QHNSCPVCRQEL 229
+H +CP+C+ +
Sbjct: 297 EHCTCPMCKLNI 308
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 144 EELFEQLSANGR--RGPPPAARSAIDAMPTVR-----ITQRHLRSDSHCPVCQDKFELGS 196
EEL E A G RG ++ I+ +PT + I R R+ C +CQ K+++G
Sbjct: 153 EELVELGEAVGTESRG---LSQELIETLPTKKYKFGSIFSRK-RAGERCVICQLKYKIGE 208
Query: 197 EARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 229
+PC H+YHS+CI WL + CPVC E+
Sbjct: 209 RQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 161 AARSAIDAMPTVRITQRHLRSD---SHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLV 217
AA+ AI + T + + +D HC VC + ++ R +PC H++H C+ PWL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 218 QHNSCPVCRQEL 229
+H +CP+C+ +
Sbjct: 297 EHCTCPMCKLNI 308
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 161 AARSAIDAMPTVRITQRHLRSD---SHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLV 217
AA+ AI + T + + +D HC VC + ++ R +PC H++H C+ PWL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLS 296
Query: 218 QHNSCPVCRQEL 229
+H +CP+C+ +
Sbjct: 297 EHCTCPMCKLNI 308
>sp|Q84TF5|RHA4A_ARATH RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A
PE=2 SV=1
Length = 174
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 182 DSHCPVCQDKFELGSEARQMP-CNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSS 237
DS C VC +FEL E +MP C HI+H DCI WL HN+CP+CR + + + +S
Sbjct: 102 DSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTKTS 158
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 185 CPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIHQSSS 244
C +C +K+ G E R +PC H +H C+ PWL+QH++CP CR + Q + S + +S
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETS 352
Query: 245 GQSR 248
SR
Sbjct: 353 NLSR 356
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 181 SDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIH 240
S S C +C +K+ G E R +PC H +H C+ PWL+QH++CP CR + Q + +
Sbjct: 286 STSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPGAVC 345
Query: 241 QSSSGQSR 248
+S +R
Sbjct: 346 VETSNLTR 353
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 163 RSAIDAMP--TVRITQRHLRSDS-HCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQH 219
+ I +P TV+ ++ + D+ +C VC + F++ R +PC HI+H CI PWL+ H
Sbjct: 240 KKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDH 299
Query: 220 NSCPVCRQEL 229
+CP+C+ ++
Sbjct: 300 RTCPMCKLDV 309
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 171 TVRITQRHLRSDS-HCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 229
TV+ ++ + D+ +C VC + F++ R +PC HI+H CI PWL+ H +CP+C+ ++
Sbjct: 254 TVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDV 313
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 20/129 (15%)
Query: 185 CPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQ-HNSCPVCRQE-LPLQGSSSSRI--- 239
C +C D++E G + R +PC+H YH C+ PWL + +CPVC+Q+ +P QG S S
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSS 299
Query: 240 --------HQSSSGQSRSTSFGSNGSGRENQGRRNLFSGFWPFRSSNSSSNHNGTTESSS 291
H S S S G+ E++ +N+ SS+ + N T+SS
Sbjct: 300 QEENEVTEHTPLLRPLASVSAQSFGALSESRSHQNM------TESSDYEEDDNEDTDSSD 353
Query: 292 PAMHENNPH 300
A +E N H
Sbjct: 354 -AENEINEH 361
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 20/129 (15%)
Query: 185 CPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQ-HNSCPVCRQE-LPLQGSSSSRI--- 239
C +C D++E G + R +PC+H YH C+ PWL + +CPVC+Q+ +P QG S S
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSS 299
Query: 240 --------HQSSSGQSRSTSFGSNGSGRENQGRRNLFSGFWPFRSSNSSSNHNGTTESSS 291
H S S S G+ E++ +N+ SS+ + N T+SS
Sbjct: 300 QEENEVTEHTPLLRPLASVSAQSFGALSESRSHQNM------TESSDYEEDDNEDTDSSD 353
Query: 292 PAMHENNPH 300
A +E N H
Sbjct: 354 -AENEINEH 361
>sp|Q9Y7K6|YGI4_SCHPO Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC2A9.04c PE=4 SV=1
Length = 741
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 159 PPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSE--ARQMPCNHIYHSDCIVPWL 216
PP R+ +A + D CP+C D E A +MPC HI+ +C+ WL
Sbjct: 81 PPVKRAVKEAWDSFEPLSNDQLMDLTCPICYDDMNENDEKQATKMPCGHIFGKNCLQKWL 140
Query: 217 VQHNSCPVCRQELP 230
H +CP+CR+E+P
Sbjct: 141 ENHCTCPLCRKEVP 154
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 144 EELFEQLSANGRRGPPPAARSAIDAMPTVRITQRHLRSD-SHCPVCQDKFELGSEARQMP 202
E+++ +L A G G ++ +P ++ +R +HC +C + G R +P
Sbjct: 140 EDVYGELEARGLSG------DSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLP 193
Query: 203 -CNHIYHSDCIVPWLVQHNSCPVCRQELP 230
C+H +H C+ WL++H SCP+CRQ +
Sbjct: 194 KCDHTFHLVCVDKWLIRHGSCPICRQAVK 222
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 185 CPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQ-HNSCPVCRQE-LPLQG 233
C +C D++E G + R +PC+H YH C+ PWL + +CPVC+Q+ +P QG
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQG 290
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 161 AARSAIDAMP--TVRITQRHLRSD-SHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLV 217
AA+ AI + T+R + SD +C VC + ++ R +PC H++H C+ PWL+
Sbjct: 250 AAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL 309
Query: 218 QHNSCPVCRQEL 229
H +CP+C+ +
Sbjct: 310 DHRTCPMCKMNI 321
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 175 TQRHLRS-DSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQG 233
T+R L + D+ C +C +E G+E +PCNH +HS CIV WL +CP+C+ + L+G
Sbjct: 296 TERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI-LKG 354
Query: 234 SS 235
++
Sbjct: 355 TT 356
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 184 HCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 229
+C VC + ++ R +PC HI+H CI PWL++H +CP+C+ ++
Sbjct: 263 NCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCKLDV 308
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 145 ELFEQLSANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMP-C 203
++F+ + G G +++ +P VRIT S C VC F++G R +P C
Sbjct: 143 DIFDTAISKGLTG------DSLNRIPKVRITDTSPEIVS-CSVCLQDFQVGETVRSLPHC 195
Query: 204 NHIYHSDCIVPWLVQHNSCPVCRQEL 229
+H++H CI WL +H SCP+CR+ L
Sbjct: 196 HHMFHLPCIDKWLRRHASCPLCRRHL 221
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 185 CPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQ-HNSCPVCRQEL 229
C +C D++E G + R +PC H YHS C+ PWL Q +CP+C+Q +
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,140,131
Number of Sequences: 539616
Number of extensions: 5692963
Number of successful extensions: 20814
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 18757
Number of HSP's gapped (non-prelim): 1816
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)