Your job contains 1 sequence.
>021667
MSTGTAEQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMH
NLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIANRSRNLRNLRLVSCY
NISDQGFCEAIKGFPLLEELELSYCSLSQEALEAVGSLCPLLRSFKLNNRGHRCPKIECD
DDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICA
ERIRDLRHPNDSTHDYEFGADFQDFCWSSVEDYPSGISDIELVSDEDDYYEFSDYDFGYD
FDYDYLFND
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021667
(309 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115949 - symbol:AT4G05460 "AT4G05460" species... 679 8.2e-67 1
TAIR|locus:2115979 - symbol:AT4G05490 "AT4G05490" species... 515 2.0e-49 1
TAIR|locus:1005716270 - symbol:AT4G05497 "AT4G05497" spec... 473 5.6e-45 1
TAIR|locus:2140715 - symbol:AT4G03630 "AT4G03630" species... 417 4.8e-39 1
TAIR|locus:2122308 - symbol:FBW2 "AT4G08980" species:3702... 227 6.5e-19 1
TAIR|locus:2174398 - symbol:SKIP1 "SKP1 interacting partn... 139 3.4e-07 1
TAIR|locus:2139697 - symbol:AT4G11580 species:3702 "Arabi... 122 9.8e-07 2
UNIPROTKB|D6RDY7 - symbol:FBXL7 "F-box/LRR-repeat protein... 93 4.3e-05 2
TAIR|locus:4010713864 - symbol:AT4G03635 species:3702 "Ar... 102 4.3e-05 1
UNIPROTKB|F1N019 - symbol:FBXL7 "Uncharacterized protein"... 92 4.6e-05 2
UNIPROTKB|J3KNM9 - symbol:FBXL7 "F-box/LRR-repeat protein... 93 5.2e-05 2
UNIPROTKB|Q9UJT9 - symbol:FBXL7 "F-box/LRR-repeat protein... 93 5.6e-05 2
MGI|MGI:1354704 - symbol:Fbxl17 "F-box and leucine-rich r... 124 8.0e-05 1
ZFIN|ZDB-GENE-061215-122 - symbol:zgc:158346 "zgc:158346"... 95 8.4e-05 2
UNIPROTKB|F1SRM7 - symbol:FBXL7 "Uncharacterized protein"... 92 9.2e-05 2
RGD|621722 - symbol:Fbxl20 "F-box and leucine-rich repeat... 115 0.00018 1
TAIR|locus:2118736 - symbol:AT4G30640 "AT4G30640" species... 115 0.00022 1
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 115 0.00043 1
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 114 0.00056 1
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 114 0.00056 1
TAIR|locus:2027082 - symbol:SKP2A species:3702 "Arabidops... 98 0.00069 2
>TAIR|locus:2115949 [details] [associations]
symbol:AT4G05460 "AT4G05460" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 EMBL:AL161503
HOGENOM:HOG000239019 EMBL:BT003081 EMBL:AY087774 EMBL:AK227360
IPI:IPI00546408 PIR:F85068 RefSeq:NP_567294.1 UniGene:At.48830
UniGene:At.66629 ProteinModelPortal:Q9M0U9 SMR:Q9M0U9 IntAct:Q9M0U9
STRING:Q9M0U9 PaxDb:Q9M0U9 PRIDE:Q9M0U9 EnsemblPlants:AT4G05460.1
GeneID:825896 KEGG:ath:AT4G05460 TAIR:At4g05460 eggNOG:NOG251781
InParanoid:Q9M0U9 OMA:CFRLNER PhylomeDB:Q9M0U9
ProtClustDB:CLSN2917517 Genevestigator:Q9M0U9 Uniprot:Q9M0U9
Length = 302
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 141/275 (51%), Positives = 177/275 (64%)
Query: 9 ESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDM 68
ES +WT+LP ++TS IL ++GAI++L +AQ+VC SW R+C DP+MWR IDMHNLGDL DM
Sbjct: 15 ESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDM 74
Query: 69 DHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFC 128
D++LE MCRHAVDRS G L+ I I YFGT +LL YIA + C I+D GF
Sbjct: 75 DYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFV 134
Query: 129 EAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAE 188
EA+ P E+L VG C +++ KLN H P+ E DDDA AIAE
Sbjct: 135 EAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLNK--H--PQKENDDDALAIAE 189
Query: 189 NMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRH 248
M LRHLQL GN L++ GL AILD C +LE LDLR+CFNVNLVG L K C E ++ +RH
Sbjct: 190 TMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRH 249
Query: 249 PNDSTHDYEFGA--DFQDFCWSSVEDYPSGISDIE 281
PNDS HD + G+ D + +S + D SG D E
Sbjct: 250 PNDSIHDIDIGSSEDEDPYDFSDI-DLMSGDDDFE 283
>TAIR|locus:2115979 [details] [associations]
symbol:AT4G05490 "AT4G05490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF81383 EMBL:AL161503
IPI:IPI00523303 PIR:A85069 RefSeq:NP_567296.1 UniGene:At.54167
ProteinModelPortal:Q9M0U6 SMR:Q9M0U6 STRING:Q9M0U6 PRIDE:Q9M0U6
EnsemblPlants:AT4G05490.1 GeneID:825898 KEGG:ath:AT4G05490
TAIR:At4g05490 eggNOG:NOG282057 HOGENOM:HOG000239019
InParanoid:Q9M0U6 OMA:MEACCRH PhylomeDB:Q9M0U6
Genevestigator:Q9M0U6 Uniprot:Q9M0U6
Length = 307
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 116/282 (41%), Positives = 153/282 (54%)
Query: 7 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLW 66
E++ +W +LP D+ S+IL ++ +++L +A++VC SW R+ DP +WR IDM NL L+
Sbjct: 21 EEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLY 80
Query: 67 DMDHDLEKMCRHAVDRSNGQLLSINIEY--FGTDELLQYIAXXXXXXXXXXXVSCYNISD 124
+ + +E CRH VD S G LL NI+ F T LL Y+A V I+
Sbjct: 81 CI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITS 138
Query: 125 QGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAK 184
G EAI P +E + +G CP L++ KL G E D+DA
Sbjct: 139 VGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDNDAL 196
Query: 185 AIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIR 244
AIA+ M GL HLQL N LTN+GL AILD CPHLE LDLRQCFN+NL G L + C ERI+
Sbjct: 197 AIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIK 256
Query: 245 DLRHPNDSTHDYEF-----GADFQDFCWSSVEDYPSGISDIE 281
D R PND DY + +D E+Y G D E
Sbjct: 257 DFRCPNDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTE 298
>TAIR|locus:1005716270 [details] [associations]
symbol:AT4G05497 "AT4G05497" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q13309
HOGENOM:HOG000239019 EMBL:AF147263 IPI:IPI00516725
RefSeq:NP_849530.1 UniGene:At.54168 ProteinModelPortal:Q9S9V8
SMR:Q9S9V8 PRIDE:Q9S9V8 EnsemblPlants:AT4G05497.1 GeneID:830176
KEGG:ath:AT4G05497 TAIR:At4g05497 eggNOG:NOG252528
InParanoid:Q9S9V8 OMA:NAILEGC PhylomeDB:Q9S9V8
ProtClustDB:CLSN2918307 Genevestigator:Q9S9V8 Uniprot:Q9S9V8
Length = 246
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 101/231 (43%), Positives = 134/231 (58%)
Query: 12 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMH---NLGDLWDM 68
+W +LP ++TS+IL ++GAI++L +AQRVC SW R+C DP+MWR ID+ NL + ++
Sbjct: 20 NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVEL 79
Query: 69 DHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFC 128
+ +E +C AVD S G LL INI+Y L YIA V C + +G
Sbjct: 80 FYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVV 139
Query: 129 EAIKGFPXXXXXXXXXXXXXQEA-LEAVGSLCPLLRSFKLNNRGH-RCPKIECDDDAKAI 186
EA P +E L+ VG CP LR+ KLN G +C CD A AI
Sbjct: 140 EAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC----CDKVALAI 195
Query: 187 AENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGK 237
AE M GLRHLQLF N L+ GL AIL+ CPHL++L L QC N+N+VG + K
Sbjct: 196 AETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
>TAIR|locus:2140715 [details] [associations]
symbol:AT4G03630 "AT4G03630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AC005142
EMBL:AL161497 HOGENOM:HOG000239019 eggNOG:KOG1947 EMBL:DQ056642
IPI:IPI00531603 PIR:A85046 RefSeq:NP_192272.1 UniGene:At.54122
ProteinModelPortal:Q9SY41 SMR:Q9SY41 EnsemblPlants:AT4G03630.1
GeneID:825663 KEGG:ath:AT4G03630 TAIR:At4g03630 InParanoid:Q9SY41
OMA:ELEISHG PhylomeDB:Q9SY41 ArrayExpress:Q9SY41
Genevestigator:Q9SY41 Uniprot:Q9SY41
Length = 220
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 93/191 (48%), Positives = 110/191 (57%)
Query: 75 MCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQG-FCEAIKG 133
MC HAV S G + INIE+FGTD LL YIA C I+ G F EA+K
Sbjct: 29 MC-HAVALSQGGCVEINIEHFGTDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTEAMK- 86
Query: 134 FPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGL 193
P + LEA+G C L++ KLN +G + P D DA IA+ M L
Sbjct: 87 LPLLEDLELSYCLIKGKNLEAIGFACLHLKTLKLNCQGFKFPGFTYDHDALGIAKRMPEL 146
Query: 194 RHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHPNDST 253
R LQLFGN +++VGL AI D CPHLE LDLRQCFN+NLVG L K C ERI+DLR PNDST
Sbjct: 147 RCLQLFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINLVGDLEKRCMERIKDLRRPNDST 206
Query: 254 HDYEFGADFQD 264
DY + D
Sbjct: 207 ADYPYDTSLLD 217
>TAIR|locus:2122308 [details] [associations]
symbol:FBW2 "AT4G08980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] [GO:0010608
"posttranscriptional regulation of gene expression" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0009737 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016567 GO:GO:0010629
EMBL:AL161513 EMBL:AF128396 GO:GO:0010608 EMBL:BT002431
EMBL:BT008715 EMBL:AK317222 EMBL:AY084585 IPI:IPI00545019
PIR:F85090 RefSeq:NP_001078359.1 RefSeq:NP_001154215.1
RefSeq:NP_567343.1 RefSeq:NP_849346.1 RefSeq:NP_974523.1
UniGene:At.27697 ProteinModelPortal:Q9ZPE4 SMR:Q9ZPE4 IntAct:Q9ZPE4
STRING:Q9ZPE4 EnsemblPlants:AT4G08980.1 EnsemblPlants:AT4G08980.2
EnsemblPlants:AT4G08980.3 EnsemblPlants:AT4G08980.4
EnsemblPlants:AT4G08980.5 GeneID:826476 KEGG:ath:AT4G08980
TAIR:At4g08980 eggNOG:NOG274710 HOGENOM:HOG000239506
InParanoid:Q9ZPE4 OMA:RVCKSWS PhylomeDB:Q9ZPE4
ProtClustDB:CLSN2689382 Genevestigator:Q9ZPE4 Uniprot:Q9ZPE4
Length = 317
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 73/278 (26%), Positives = 116/278 (41%)
Query: 8 QESCD---WTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGD 64
+E C+ W +L D I S + +VLT RVC +W R P W+ ID+ +
Sbjct: 2 EEDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSN 61
Query: 65 LWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISD 124
+ L++M + RS G L +++ D + +IA V +++
Sbjct: 62 RFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLK-VPRSGLTN 120
Query: 125 QGFCEAIKGFPXXXXXXXXXX-XXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIEC-DDD 182
G + EA++A+G C LR F N + DD+
Sbjct: 121 SGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDE 180
Query: 183 AKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKICAER 242
A AIA M L+ L++ + ++ G+ IL C LE L+LR C++V L K K E+
Sbjct: 181 AYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFK---EK 237
Query: 243 IRDLRHPNDSTHD-YEFGADFQDFCWSSVEDYPSGISD 279
D++ Y+ D++D C DY S SD
Sbjct: 238 FPDMKVLGPRVIGFYDMINDWEDCC----SDYFSDGSD 271
>TAIR|locus:2174398 [details] [associations]
symbol:SKIP1 "SKP1 interacting partner 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005 EMBL:AB013396
HOGENOM:HOG000242674 EMBL:AF263377 EMBL:AK229464 EMBL:BT026067
IPI:IPI00521503 RefSeq:NP_568870.1 UniGene:At.7657
ProteinModelPortal:Q9FDX1 SMR:Q9FDX1 IntAct:Q9FDX1 STRING:Q9FDX1
PaxDb:Q9FDX1 PRIDE:Q9FDX1 EnsemblPlants:AT5G57900.1 GeneID:835901
KEGG:ath:AT5G57900 TAIR:At5g57900 eggNOG:NOG287916
InParanoid:Q9FDX1 OMA:ERYGHWR PhylomeDB:Q9FDX1
ProtClustDB:CLSN2689687 Genevestigator:Q9FDX1 Uniprot:Q9FDX1
Length = 300
Score = 139 (54.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 43/172 (25%), Positives = 68/172 (39%)
Query: 7 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGD-- 64
E++ DW L ++ I+S++ ++ T V SWL +C DP +W D+ D
Sbjct: 2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSY 61
Query: 65 -----LW--DMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXV 117
LW + + ++ M R VD S G L I + + +D L Y A
Sbjct: 62 PESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIR 120
Query: 118 SCYNISDQGFCE-AIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN 168
S N++D + A + + L +G CP LR K N
Sbjct: 121 SSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRN 172
Score = 131 (51.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/183 (26%), Positives = 77/183 (42%)
Query: 65 LW--DMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNI 122
LW + + ++ M R VD S G L I + + +D L Y A S N+
Sbjct: 67 LWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNV 125
Query: 123 SDQGFCE-AIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN----NRGH----- 172
+D + A + + L +G CP LR K N + H
Sbjct: 126 TDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVP 185
Query: 173 -----RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCF 227
CP+ + D +A AI ++M L HL++ + L+ GL +I + CP LE LDL C
Sbjct: 186 TEYLDACPQ-DGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCV 244
Query: 228 NVN 230
+++
Sbjct: 245 HLS 247
>TAIR|locus:2139697 [details] [associations]
symbol:AT4G11580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] PROSITE:PS50181 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161532 EMBL:AL049500
IPI:IPI00519994 PIR:T04205 RefSeq:NP_192895.1 UniGene:At.54278
ProteinModelPortal:Q9T0C6 SMR:Q9T0C6 PaxDb:Q9T0C6 PRIDE:Q9T0C6
EnsemblPlants:AT4G11580.1 GeneID:826762 KEGG:ath:AT4G11580
TAIR:At4g11580 eggNOG:NOG303750 HOGENOM:HOG000112517
InParanoid:Q9T0C6 OMA:YIQENGL PhylomeDB:Q9T0C6
ProtClustDB:CLSN2915889 Genevestigator:Q9T0C6 Uniprot:Q9T0C6
Length = 333
Score = 122 (48.0 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 31/100 (31%), Positives = 47/100 (47%)
Query: 9 ESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDM 68
E +W L D+ I +K+ +D+ A RVC SW H+ +W +D+ NL +L D+
Sbjct: 10 EVSEWADLNKDILELIFNKLDVMDITMGASRVCISWFLASHNKTLWNTVDLTNLQEL-DV 68
Query: 69 DH-----DLEK---MCRHAVDRSNG--QLLSINIEYFGTD 98
D E+ +H VD +G LL+ I F D
Sbjct: 69 SRIFNFKDKERPIFFYKHPVDHKHGLTNLLTKIISRFFLD 108
Score = 52 (23.4 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 153 EAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAIL 212
+AVG C L + K R +E + ++ I +H L+ L L ++++ + +
Sbjct: 203 KAVGESCSNLTNLKYLGR------LE-EYTSREIVSYLHSLKRLSLRCFLVSSIAVYRFI 255
Query: 213 DACPHLESLDLRQCFN 228
P+L L++ C N
Sbjct: 256 TGLPNLTILNVSHCKN 271
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 182 DAKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNVNLV 232
D KA+ E+ L +L+ G L + I+ L+ L LR CF V+ +
Sbjct: 201 DFKAVGESCSNLTNLKYLGR-LEEYTSREIVSYLHSLKRLSLR-CFLVSSI 249
>UNIPROTKB|D6RDY7 [details] [associations]
symbol:FBXL7 "F-box/LRR-repeat protein 7" species:9606
"Homo sapiens" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005813
GO:GO:0000086 GO:GO:0007067 GO:GO:0008283 SUPFAM:SSF81383
GO:GO:0019005 InterPro:IPR006553 SMART:SM00367 GO:GO:0031146
HOGENOM:HOG000116328 HGNC:HGNC:13604 ChiTaRS:FBXL7 EMBL:AC010477
EMBL:AC010638 EMBL:AC027332 EMBL:AC091872 EMBL:AC091970
IPI:IPI00967207 ProteinModelPortal:D6RDY7 SMR:D6RDY7
Ensembl:ENST00000510662 ArrayExpress:D6RDY7 Bgee:D6RDY7
Uniprot:D6RDY7
Length = 444
Score = 93 (37.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 37/134 (27%), Positives = 54/134 (40%)
Query: 7 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLW 66
EQ S D +LP I S + + L RVC W + DP +WR I + G+
Sbjct: 63 EQASID--RLPDHSMVQIFSFLPT-NQLCRCARVCRRWYNLAWDPRLWRTIRL--TGETI 117
Query: 67 DMDHDLEKMCRHAV-DRSNGQLLSINIEYFG----TDELLQYIAXXXXXXXXXXXVSCYN 121
++D L+ + R D N L+ + G TD L IA CYN
Sbjct: 118 NVDRALKVLTRRLCQDTPNVCLMLETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYN 177
Query: 122 ISDQGFCEAIKGFP 135
IS++ + + P
Sbjct: 178 ISNEAVFDVVSLCP 191
Score = 73 (30.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 152 LEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNE-LTNVGLQA 210
+E + C L+S + +CP + D + +A N L+ L L E +T GLQ
Sbjct: 347 VEYLAKNCTKLKSLDIG----KCPLVS-DTGLECLALNCFNLKRLSLKSCESITGQGLQI 401
Query: 211 ILDACPHLESLDLRQC 226
+ C L++L+++ C
Sbjct: 402 VAANCFDLQTLNVQDC 417
>TAIR|locus:4010713864 [details] [associations]
symbol:AT4G03635 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002687 EMBL:DQ487584
IPI:IPI00846243 RefSeq:NP_001078350.1 UniGene:At.47915
ProteinModelPortal:Q1G3K0 SMR:Q1G3K0 EnsemblPlants:AT4G03635.1
GeneID:5008119 KEGG:ath:AT4G03635 TAIR:At4g03635 PhylomeDB:Q1G3K0
Genevestigator:Q1G3K0 Uniprot:Q1G3K0
Length = 88
Score = 102 (41.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 24/75 (32%), Positives = 32/75 (42%)
Query: 94 YFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALE 153
+FG D L YIA CY ++ GF A+ Q L+
Sbjct: 3 HFGNDSLYSYIAQRSSNLRCLRLAMCYPLTGNGFVSAVMKL-SFLEELDISQGYTQLDLK 61
Query: 154 AVGSLCPLLRSFKLN 168
A+G CPLL++FKLN
Sbjct: 62 AIGHSCPLLKTFKLN 76
>UNIPROTKB|F1N019 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000086 "G2/M transition of mitotic
cell cycle" evidence=IEA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067
GO:GO:0008283 SUPFAM:SSF81383 GO:GO:0019005
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 OMA:LMLETVI EMBL:DAAA02051082 IPI:IPI00686135
Ensembl:ENSBTAT00000004177 Uniprot:F1N019
Length = 449
Score = 92 (37.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 33/134 (24%), Positives = 53/134 (39%)
Query: 7 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLW 66
++E +LP + S + + L RVC W + DP +WR I + G+
Sbjct: 66 QKEQASIERLPDHAMVQVFSFLPT-NQLCRCARVCRRWYNLAWDPRLWRTIRL--TGETI 122
Query: 67 DMDHDLEKMCRHAV-DRSNGQLLSINIEYFG----TDELLQYIAXXXXXXXXXXXVSCYN 121
++D L+ + R D N L+ + G TD L IA CYN
Sbjct: 123 NVDRALKVLTRRLCQDTPNVCLMLETVSVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYN 182
Query: 122 ISDQGFCEAIKGFP 135
IS++ + + P
Sbjct: 183 ISNEAVFDVVSLCP 196
Score = 74 (31.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 152 LEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNE-LTNVGLQA 210
LE + C L+S + +CP + D + +A N L+ L L E +T GLQ
Sbjct: 352 LEYLAKNCAKLKSLDIG----KCPLVS-DTGLECLALNCFNLKRLSLKSCESITGQGLQI 406
Query: 211 ILDACPHLESLDLRQC 226
+ C L+ L+++ C
Sbjct: 407 VAANCFDLQMLNVQDC 422
>UNIPROTKB|J3KNM9 [details] [associations]
symbol:FBXL7 "F-box/LRR-repeat protein 7" species:9606
"Homo sapiens" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 SUPFAM:SSF81383
InterPro:IPR006553 SMART:SM00367 HGNC:HGNC:13604 ChiTaRS:FBXL7
EMBL:AC010477 EMBL:AC010638 EMBL:AC027332 EMBL:AC091872
EMBL:AC091970 ProteinModelPortal:J3KNM9 Ensembl:ENST00000329673
PhylomeDB:J3KNM9 Uniprot:J3KNM9
Length = 479
Score = 93 (37.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 37/134 (27%), Positives = 54/134 (40%)
Query: 7 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLW 66
EQ S D +LP I S + + L RVC W + DP +WR I + G+
Sbjct: 98 EQASID--RLPDHSMVQIFSFLPT-NQLCRCARVCRRWYNLAWDPRLWRTIRL--TGETI 152
Query: 67 DMDHDLEKMCRHAV-DRSNGQLLSINIEYFG----TDELLQYIAXXXXXXXXXXXVSCYN 121
++D L+ + R D N L+ + G TD L IA CYN
Sbjct: 153 NVDRALKVLTRRLCQDTPNVCLMLETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYN 212
Query: 122 ISDQGFCEAIKGFP 135
IS++ + + P
Sbjct: 213 ISNEAVFDVVSLCP 226
Score = 73 (30.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 152 LEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNE-LTNVGLQA 210
+E + C L+S + +CP + D + +A N L+ L L E +T GLQ
Sbjct: 382 VEYLAKNCTKLKSLDIG----KCPLVS-DTGLECLALNCFNLKRLSLKSCESITGQGLQI 436
Query: 211 ILDACPHLESLDLRQC 226
+ C L++L+++ C
Sbjct: 437 VAANCFDLQTLNVQDC 452
>UNIPROTKB|Q9UJT9 [details] [associations]
symbol:FBXL7 "F-box/LRR-repeat protein 7" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=NAS] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0005813 "centrosome"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0007067 "mitosis" evidence=ISS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 PROSITE:PS51450
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0005813
GO:GO:0000086 GO:GO:0051301 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 InterPro:IPR006553
SMART:SM00367 EMBL:CH471102 GO:GO:0031146 eggNOG:NOG259371
HOGENOM:HOG000116328 HOVERGEN:HBG051591 KO:K10273 OMA:LMLETVI
OrthoDB:EOG495ZRQ EMBL:AF199356 EMBL:AB020647 EMBL:BC075061
EMBL:BC136424 EMBL:AF174593 IPI:IPI00017566 RefSeq:NP_036436.1
UniGene:Hs.433057 ProteinModelPortal:Q9UJT9 SMR:Q9UJT9
IntAct:Q9UJT9 STRING:Q9UJT9 PhosphoSite:Q9UJT9 DMDM:37537858
PaxDb:Q9UJT9 PRIDE:Q9UJT9 Ensembl:ENST00000504595 GeneID:23194
KEGG:hsa:23194 UCSC:uc003jfn.1 CTD:23194 GeneCards:GC05P015553
HGNC:HGNC:13604 MIM:605656 neXtProt:NX_Q9UJT9 PharmGKB:PA28027
InParanoid:Q9UJT9 ChiTaRS:FBXL7 GenomeRNAi:23194 NextBio:44691
ArrayExpress:Q9UJT9 Bgee:Q9UJT9 CleanEx:HS_FBXL7
Genevestigator:Q9UJT9 Uniprot:Q9UJT9
Length = 491
Score = 93 (37.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 37/134 (27%), Positives = 54/134 (40%)
Query: 7 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLW 66
EQ S D +LP I S + + L RVC W + DP +WR I + G+
Sbjct: 110 EQASID--RLPDHSMVQIFSFLPT-NQLCRCARVCRRWYNLAWDPRLWRTIRL--TGETI 164
Query: 67 DMDHDLEKMCRHAV-DRSNGQLLSINIEYFG----TDELLQYIAXXXXXXXXXXXVSCYN 121
++D L+ + R D N L+ + G TD L IA CYN
Sbjct: 165 NVDRALKVLTRRLCQDTPNVCLMLETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYN 224
Query: 122 ISDQGFCEAIKGFP 135
IS++ + + P
Sbjct: 225 ISNEAVFDVVSLCP 238
Score = 73 (30.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 152 LEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNE-LTNVGLQA 210
+E + C L+S + +CP + D + +A N L+ L L E +T GLQ
Sbjct: 394 VEYLAKNCTKLKSLDIG----KCPLVS-DTGLECLALNCFNLKRLSLKSCESITGQGLQI 448
Query: 211 ILDACPHLESLDLRQC 226
+ C L++L+++ C
Sbjct: 449 VAANCFDLQTLNVQDC 464
>MGI|MGI:1354704 [details] [associations]
symbol:Fbxl17 "F-box and leucine-rich repeat protein 17"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 MGI:MGI:1354704
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 EMBL:CH466537
EMBL:BC058120 EMBL:BC138330 EMBL:BC138331 EMBL:AF176529
EMBL:AK004419 IPI:IPI00348513 IPI:IPI00403922 RefSeq:NP_056609.1
UniGene:Mm.136366 ProteinModelPortal:Q9QZN1 SMR:Q9QZN1
STRING:Q9QZN1 PhosphoSite:Q9QZN1 PRIDE:Q9QZN1
Ensembl:ENSMUST00000024761 GeneID:50758 KEGG:mmu:50758
UCSC:uc008dfj.2 UCSC:uc008dfl.2 CTD:64839 eggNOG:NOG317782
HOGENOM:HOG000169154 HOVERGEN:HBG107935 InParanoid:Q9QZN1 KO:K10283
OMA:PASECAP OrthoDB:EOG4BK54B ChiTaRS:FBXL17 NextBio:307645
Bgee:Q9QZN1 CleanEx:MM_FBXL17 Genevestigator:Q9QZN1
GermOnline:ENSMUSG00000023965 Uniprot:Q9QZN1
Length = 701
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 59/243 (24%), Positives = 94/243 (38%)
Query: 12 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHD 71
D QLP + I S + + SA VC W +C D W+ +D+ + + D
Sbjct: 320 DINQLPPSILLKIFSNLSLNERCLSASLVCKYWRDLCLDFQFWKQLDLSSRQQV--TDEL 377
Query: 72 LEKMCRHAVDRSNGQLLSINIEYFGT--DELLQYIAXXXXXXXXXXXVSCYNISDQGFCE 129
LEK+ RS ++ INI + D + +A C +SD
Sbjct: 378 LEKIA----SRSQN-IIEINISDCRSLSDSGVCVLAFKCPGLLRYTAYRCKQLSDTSIIA 432
Query: 130 AIKGFPXXXXXXXXXXXX-XQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAE 188
P E L+ +GS C L+ +C KI D+ IA+
Sbjct: 433 VASHCPLLQKVHVGNQDKLTDEGLKQLGSRCRELKDIHFG----QCYKIS-DEGMIVIAK 487
Query: 189 NMHGLRHLQLFGNEL-TNVGLQAILDACPHLESLDLRQCFNVNLVG--KLGKICAERIRD 245
+ L+ + + N+L T+ ++A + CP L+ + C +V G L K+ D
Sbjct: 488 SCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC-SVTSKGVIHLTKLRNLSSLD 546
Query: 246 LRH 248
LRH
Sbjct: 547 LRH 549
>ZFIN|ZDB-GENE-061215-122 [details] [associations]
symbol:zgc:158346 "zgc:158346" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 PROSITE:PS51450 SMART:SM00256
UniPathway:UPA00143 ZFIN:ZDB-GENE-061215-122 GO:GO:0005737
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0005815
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
EMBL:CR450710 EMBL:BC128845 EMBL:BC129207 IPI:IPI00495246
RefSeq:NP_001073511.1 UniGene:Dr.85307 ProteinModelPortal:A1A5X2
Ensembl:ENSDART00000089822 GeneID:569430 KEGG:dre:569430
eggNOG:NOG259371 HOGENOM:HOG000116328 HOVERGEN:HBG051591
InParanoid:A1A5X2 KO:K10273 OMA:LMLETVI OrthoDB:EOG495ZRQ
NextBio:20889672 Bgee:A1A5X2 Uniprot:A1A5X2
Length = 489
Score = 95 (38.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 27/107 (25%), Positives = 42/107 (39%)
Query: 34 LTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSIN-I 92
L RVC W + DP +WR I + GD+ +D L + R + L++ +
Sbjct: 132 LCRCARVCRRWYNLAWDPRLWRTIRL--TGDVLHVDRALRVLTRRLCQDTPNVCLTVETV 189
Query: 93 EYFG----TDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFP 135
G TD L +A CYN+S++ E + P
Sbjct: 190 MVSGCRRLTDRGLYTVAQSCPELRRLEVAGCYNVSNEAVFEVVSRCP 236
Score = 69 (29.3 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 152 LEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNE-LTNVGLQA 210
+E + C L+S + +CP + D + +A N L+ L L E +T GLQ
Sbjct: 392 IEHLAKSCLKLKSLDIG----KCPLVS-DAGLEQLALNSFNLKRLSLKSCESITGRGLQV 446
Query: 211 ILDACPHLESLDLRQCFNVNL 231
+ C L+ L+++ C +V+L
Sbjct: 447 VAANCFDLQLLNVQDC-DVSL 466
>UNIPROTKB|F1SRM7 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000086 "G2/M transition of mitotic
cell cycle" evidence=IEA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067
GO:GO:0008283 SUPFAM:SSF81383 GO:GO:0019005
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 OMA:LMLETVI EMBL:FP236208 Ensembl:ENSSSCT00000025512
Uniprot:F1SRM7
Length = 449
Score = 92 (37.4 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 33/134 (24%), Positives = 53/134 (39%)
Query: 7 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLW 66
++E +LP + S + + L RVC W + DP +WR I + G+
Sbjct: 66 QKEQASIERLPDHAMVQVFSFLPT-NQLCRCARVCRRWYNLAWDPRLWRTIRL--TGETI 122
Query: 67 DMDHDLEKMCRHAV-DRSNGQLLSINIEYFG----TDELLQYIAXXXXXXXXXXXVSCYN 121
++D L+ + R D N L+ + G TD L IA CYN
Sbjct: 123 NVDRALKVLTRRLCQDTPNVCLMLETVSVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYN 182
Query: 122 ISDQGFCEAIKGFP 135
IS++ + + P
Sbjct: 183 ISNEAVFDVVSLCP 196
Score = 71 (30.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 152 LEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNE-LTNVGLQA 210
+E + C L+S + +CP + D + +A N L+ L L E +T GLQ
Sbjct: 352 VEYLAKNCAKLKSLDIG----KCPLVS-DTGLECLALNCFNLKRLSLKSCESITGQGLQI 406
Query: 211 ILDACPHLESLDLRQC 226
+ C L+ L+++ C
Sbjct: 407 VAANCFDLQMLNVQDC 422
>RGD|621722 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:621722 GO:GO:0005737 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 HOVERGEN:HBG051586 CTD:84961 EMBL:AF182443
IPI:IPI00215006 PIR:T52349 RefSeq:NP_071608.1 UniGene:Rn.18281
ProteinModelPortal:Q9QZH7 Ensembl:ENSRNOT00000067317 GeneID:64039
KEGG:rno:64039 UCSC:RGD:621722 InParanoid:Q9QZH7 NextBio:612681
ArrayExpress:Q9QZH7 Genevestigator:Q9QZH7
GermOnline:ENSRNOG00000005081 Uniprot:Q9QZH7
Length = 276
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 53/231 (22%), Positives = 93/231 (40%)
Query: 15 QLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLE- 73
+LP ++ I S + + + AQ V +W + D + W+ ID L+D D+E
Sbjct: 27 KLPKELLLRIFSFLDVVTLCRCAQ-VSRAWNVLALDGSNWQRID------LFDFQRDIEG 79
Query: 74 KMCRHAVDRSNGQLLSINIE-YFGT-DELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAI 131
++ + R G L +++ G D L+ A C +D C ++
Sbjct: 80 RVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTD-ATCTSL 138
Query: 132 KGF--PXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAEN 189
F +L+A+ CPLL ++ C ++ D +A+
Sbjct: 139 SKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNIS----WCDQVT-KDGIQALVRG 193
Query: 190 MHGLRHLQLFG-NELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKIC 239
GL+ L L G +L + L+ I CP L +L+L+ C + G + IC
Sbjct: 194 CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI-TIC 243
>TAIR|locus:2118736 [details] [associations]
symbol:AT4G30640 "AT4G30640" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50181 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161577 IPI:IPI00543230 PIR:E85358
RefSeq:NP_567849.1 UniGene:At.54559 ProteinModelPortal:Q9M096
SMR:Q9M096 EnsemblPlants:AT4G30640.1 GeneID:829187
KEGG:ath:AT4G30640 TAIR:At4g30640 eggNOG:NOG330723
HOGENOM:HOG000242674 InParanoid:Q9M096 OMA:SELTREC PhylomeDB:Q9M096
ProtClustDB:CLSN2917637 Genevestigator:Q9M096 Uniprot:Q9M096
Length = 301
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 45/179 (25%), Positives = 70/179 (39%)
Query: 67 DMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQG 126
+ + ++ R VDRS G L I I + T+ L Y A +C N++D
Sbjct: 83 EFEDKVDSFLRSVVDRSEGGLTEIRIRHC-TERSLSYAAERCPNLEVLWIKNCPNVTDAS 141
Query: 127 FCEAIKGFPXXXXXXXXXXXX-XQEALEAVGSLCPLLRSFKLN---NRGHRCPKIECDDD 182
+ P E+L +G C L+ K N G P I D
Sbjct: 142 MEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVAPLD 201
Query: 183 ------------AKAIAENMHGLRHLQLFGNELTNVGLQAILDACPHLESLDLRQCFNV 229
A+ I + M L+HL++ + LT GL ++ C +LE +DLR C ++
Sbjct: 202 YLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCISL 260
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 53/231 (22%), Positives = 93/231 (40%)
Query: 15 QLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLE- 73
+LP ++ I S + + + AQ V +W + D + W+ ID L+D D+E
Sbjct: 27 KLPKELLLRIFSFLDVVTLCRCAQ-VSRAWNVLALDGSNWQRID------LFDFQRDIEG 79
Query: 74 KMCRHAVDRSNGQLLSINIE-YFGT-DELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAI 131
++ + R G L +++ G D L+ A C +D C ++
Sbjct: 80 RVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTD-ATCTSL 138
Query: 132 KGF--PXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAEN 189
F +L+A+ CPLL ++ C ++ D +A+
Sbjct: 139 SKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNIS----WCDQVT-KDGIQALVRG 193
Query: 190 MHGLRHLQLFG-NELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKIC 239
GL+ L L G +L + L+ I CP L +L+L+ C + G + IC
Sbjct: 194 CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI-TIC 243
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 53/231 (22%), Positives = 93/231 (40%)
Query: 15 QLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLE- 73
+LP ++ I S + + + AQ V +W + D + W+ ID L+D D+E
Sbjct: 27 KLPKELLLRIFSFLDVVTLCRCAQ-VSRAWNVLALDGSNWQRID------LFDFQRDIEG 79
Query: 74 KMCRHAVDRSNGQLLSINIE-YFGT-DELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAI 131
++ + R G L +++ G D L+ A C +D C ++
Sbjct: 80 RVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTD-ATCTSL 138
Query: 132 KGF--PXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAEN 189
F +L+A+ CPLL ++ C ++ D +A+
Sbjct: 139 SKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNIS----WCDQVT-KDGIQALVRG 193
Query: 190 MHGLRHLQLFG-NELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKIC 239
GL+ L L G +L + L+ I CP L +L+L+ C + G + IC
Sbjct: 194 CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI-TIC 243
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 53/231 (22%), Positives = 93/231 (40%)
Query: 15 QLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLE- 73
+LP ++ I S + + + AQ V +W + D + W+ ID L+D D+E
Sbjct: 27 KLPKELLLRIFSFLDVVTLCRCAQ-VSRAWNVLALDGSNWQRID------LFDFQRDIEG 79
Query: 74 KMCRHAVDRSNGQLLSINIE-YFGT-DELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAI 131
++ + R G L +++ G D L+ A C +D C ++
Sbjct: 80 RVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTD-ATCTSL 138
Query: 132 KGF--PXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAEN 189
F +L+A+ CPLL ++ C ++ D +A+
Sbjct: 139 SKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNIS----WCDQVT-KDGIQALVRG 193
Query: 190 MHGLRHLQLFG-NELTNVGLQAILDACPHLESLDLRQCFNVNLVGKLGKIC 239
GL+ L L G +L + L+ I CP L +L+L+ C + G + IC
Sbjct: 194 CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI-TIC 243
>TAIR|locus:2027082 [details] [associations]
symbol:SKP2A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0071365 "cellular response to auxin stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0051781
SUPFAM:SSF81383 GO:GO:0010311 EMBL:AC015447 GO:GO:0019005
GO:GO:0071365 GO:GO:0004842 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 KO:K10268 EMBL:AY058081 EMBL:AY090308 EMBL:AY085898
IPI:IPI00519620 PIR:B86347 RefSeq:NP_564139.1 UniGene:At.25230
ProteinModelPortal:Q9LPL4 SMR:Q9LPL4 IntAct:Q9LPL4 STRING:Q9LPL4
EnsemblPlants:AT1G21410.1 GeneID:838740 KEGG:ath:AT1G21410
TAIR:At1g21410 eggNOG:NOG257455 HOGENOM:HOG000238537
InParanoid:Q9LPL4 OMA:NLNISQC PhylomeDB:Q9LPL4
ProtClustDB:CLSN2687892 Genevestigator:Q9LPL4 Uniprot:Q9LPL4
Length = 360
Score = 98 (39.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 30/80 (37%), Positives = 40/80 (50%)
Query: 151 ALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNEL-TNVGLQ 209
ALEA+G+ C ++S L C I DD ++A LR L L G L T+ +
Sbjct: 187 ALEAIGNNCNQMQSLNLG----WCENIS-DDGVMSLAYGCPDLRTLDLCGCVLITDESVV 241
Query: 210 AILDACPHLESLDLRQCFNV 229
A+ D C HL SL L C N+
Sbjct: 242 ALADWCVHLRSLGLYYCRNI 261
Score = 53 (23.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 12 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSW 44
+W +P ++ ILS + +V+ A VC+ W
Sbjct: 27 EWKDIPVELLMRILSLVDDRNVIV-ASGVCTGW 58
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 309 263 0.00091 114 3 11 22 0.44 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 621 (66 KB)
Total size of DFA: 238 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.52u 0.09s 19.61t Elapsed: 00:00:01
Total cpu time: 19.53u 0.09s 19.62t Elapsed: 00:00:01
Start: Fri May 10 06:09:46 2013 End: Fri May 10 06:09:47 2013