Your job contains 1 sequence.
>021668
MASALMTSSMNTPLHHHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPE
IQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSV
MPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI
MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQ
VWDDILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL
ADFLVSRHK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021668
(309 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 379 5.3e-49 2
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 358 8.7e-49 2
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 346 5.9e-44 2
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 325 1.8e-42 2
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 331 2.2e-42 2
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 395 1.0e-36 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 391 2.7e-36 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 380 4.0e-35 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 377 8.3e-35 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 373 2.2e-34 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 284 7.9e-33 2
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 284 7.9e-33 2
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 241 5.1e-26 2
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 221 9.0e-25 2
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 238 4.4e-20 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 238 4.4e-20 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 214 4.9e-20 2
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 214 4.9e-20 2
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 218 6.8e-18 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 213 1.3e-16 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 195 5.9e-15 2
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 179 6.5e-13 2
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 179 6.5e-13 2
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 187 7.2e-13 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 176 1.9e-11 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 176 1.9e-11 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 150 1.9e-08 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 150 1.9e-08 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 129 7.3e-07 2
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 100 1.7e-06 3
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 131 3.9e-06 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 106 1.8e-05 2
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 124 3.6e-05 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 110 0.00017 2
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 115 0.00031 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 113 0.00046 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 113 0.00046 1
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 379 (138.5 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 78/186 (41%), Positives = 117/186 (62%)
Query: 131 VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-D 189
V + +LL +A EH+ T V+P R+V A+ E++ ++GT G++AG++ +I G
Sbjct: 182 VAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNAS 241
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
VSL L+FI + L+E+SVV G ++GGG+ ++EKLR++ +C+GL +QV DDILD
Sbjct: 242 VSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVT 301
Query: 250 KKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K +E G D+ TYPKL+G+ AK +A EL EA Q+L FD +AAPL LA
Sbjct: 302 KSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALA 361
Query: 302 DFLVSR 307
D++ R
Sbjct: 362 DYIAYR 367
Score = 149 (57.5 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 48/128 (37%), Positives = 67/128 (52%)
Query: 19 KTPLGKPKVAP--NPKASHVPKSSSL--DQAENLTIKS-NNNNPFPEIQIDEYMTLKAKK 73
K PL K+ P N K P + S E+ I++ PF +I Y+T KA
Sbjct: 32 KIPLKNSKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEPF-NFKI--YVTEKAIS 88
Query: 74 INKALFEGAAV--PLIL----QYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAA 127
+NKAL E V P ++ +Y L G+RV LC+A+CELVGGN+ + M ACA
Sbjct: 89 VNKALDEAIIVKEPHVIHEAMRYSLLAG--GKRVRPMLCLAACELVGGNQENAMAAACAV 146
Query: 128 EMLVTLAL 135
EM+ T++L
Sbjct: 147 EMIHTMSL 154
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 358 (131.1 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 79/190 (41%), Positives = 117/190 (61%)
Query: 131 VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD- 189
V + ALL A EHM T +S +R+V A+ E++ ++GTRG++AG+ M+I+S+G D
Sbjct: 189 VAILSGGALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDL 246
Query: 190 --VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
V L L+FI + L+E + V G +IGGGS+E+IE +RK+ +C+GL +QV DDILD
Sbjct: 247 NEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILD 306
Query: 248 NMKKKKE----AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
K +E AG D+ TYPKL+G+ +K + K L +A Q L F + APL
Sbjct: 307 ETKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVA 366
Query: 300 LADFLVSRHK 309
L F+ +R+K
Sbjct: 367 LTTFIANRNK 376
Score = 168 (64.2 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 44/99 (44%), Positives = 58/99 (58%)
Query: 43 DQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNH 96
++ E I SN N F + D YM KA+ +NKAL E V PL ++Y L
Sbjct: 68 EEEEEGGIVSNANFTF---EFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILA-- 122
Query: 97 EGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+RV LC+ASCELVGG E++ MP ACA EM+ T++L
Sbjct: 123 AGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSL 161
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 346 (126.9 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 74/189 (39%), Positives = 122/189 (64%)
Query: 131 VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG--- 187
V + ALL A EH+ T+ +VS ++VRA+ E++ ++GT+G++AG+ +++S+G
Sbjct: 185 VAILSGGALLALAFEHL-TEA-DVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQ 242
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
DV L +L++I + G L+EAS V G +IGGG+E++IEK+R + +C+GL +QV DDILD
Sbjct: 243 NDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILD 302
Query: 248 NMKKKKE----AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
K +E AG D+ TYPK++GV +K + ++L +A + L FD + PL
Sbjct: 303 ETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIA 362
Query: 300 LADFLVSRH 308
L +F+ +R+
Sbjct: 363 LTNFIANRN 371
Score = 134 (52.2 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA+ IN+AL E A+PLI ++Y L G+RV LC+A+CELVGG E
Sbjct: 84 YMISKAETINRALDE--AIPLIEPLNIHKAMRYAILAG--GKRVRPILCLAACELVGGEE 139
Query: 118 SSVMPLACAAEMLVTLAL 135
+ ACA EM+ T++L
Sbjct: 140 RLAIQAACAVEMIHTMSL 157
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 325 (119.5 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 76/193 (39%), Positives = 118/193 (61%)
Query: 128 EMLVTLALNRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
E + LA ++AL+ AV+ + T +V P+R+++ + E+ AV G++AG+ ++ +
Sbjct: 153 ESIAILA-SQALIALAVQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGE 209
Query: 187 G----KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
G D L L+FI + L+EA+ V G ++GGGS+E+IE+LR Y +C+GL +QV
Sbjct: 210 GMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVV 269
Query: 243 DDILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DD+LD K +E AG D + TYP+LMGV +K YA+ L EA + L FD +
Sbjct: 270 DDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKV 329
Query: 295 APLYHLADFLVSR 307
APL LAD++V+R
Sbjct: 330 APLVSLADYIVNR 342
Score = 141 (54.7 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 37/74 (50%), Positives = 45/74 (60%)
Query: 66 YMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASCELVGGN 116
YM KAK +NKAL E AVPL ++Y L +G+RV LC+A+CELVGG
Sbjct: 53 YMVNKAKSVNKALEE--AVPLREPELKIREAMRYTLLS--DGKRVRPMLCLAACELVGGQ 108
Query: 117 ESSVMPLACAAEML 130
ES+ M ACA EML
Sbjct: 109 ESTAMSAACAIEML 122
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 331 (121.6 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 77/189 (40%), Positives = 117/189 (61%)
Query: 133 LALNRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI-----NSK 186
LA N AL AV+ +A+ + V+ +R++RA+ E++ AVGT G++AG+ ++ + K
Sbjct: 147 LASN-ALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFK 205
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
+D L L+ + + L+EA+ V G ++GGGS+E+IE+L+ Y +CVGL +QV DD+L
Sbjct: 206 NEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVL 265
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D K +E AG D + TYPK+MGV A+ YAK L EA + L FD + PL
Sbjct: 266 DETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLL 325
Query: 299 HLADFLVSR 307
LAD++V R
Sbjct: 326 SLADYIVKR 334
Score = 134 (52.2 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 38/84 (45%), Positives = 46/84 (54%)
Query: 66 YMTLKAKKINKALFEGAA-----VPL---ILQ------YPTLPNHEGERVHGTLCIASCE 111
YM KAK INKAL VPL +L+ Y LP G+RV LC+ +CE
Sbjct: 35 YMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPG--GKRVRPMLCLVACE 92
Query: 112 LVGGNESSVMPLACAAEMLVTLAL 135
LVGG ES+ MP ACA EM+ +L
Sbjct: 93 LVGGQESTAMPAACAVEMIHAASL 116
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 93/242 (38%), Positives = 145/242 (59%)
Query: 80 EGAAVPLILQYPTLPNHEGERVHGTL-CIASCELVGGNESSVMPLACAAEMLVTLALNRA 138
E A+P + H +H L C+ + +L G ++ E + LA A
Sbjct: 134 ESTAMPAACAVEMI--HTMSLIHDDLPCMDNDDLRRGKPTNHKVFG---EDVAVLA-GDA 187
Query: 139 LLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLS 193
LL +A EH+A+ T + VSP R+VRA+GE++ A+GT G++AG++++I+S+G DV L
Sbjct: 188 LLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLE 247
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
L+FI + L+EAS V G ++GGGS+++IE+LRK+ +C+GL +QV DDILD K K
Sbjct: 248 HLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSK 307
Query: 254 EAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E G D+ TYPK+MG+ ++ +A++L EA +L FD + APL LA+++
Sbjct: 308 ELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIA 367
Query: 306 SR 307
R
Sbjct: 368 YR 369
Score = 159 (61.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 44/109 (40%), Positives = 60/109 (55%)
Query: 36 VPKSSSLDQAENLTIKSNNNNPFPE-IQIDEYMTLKAKKINKALFEGAAVPL-------- 86
V SSS+ + +T + N P Y+ KA+ +NKAL +AVPL
Sbjct: 48 VSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKAL--DSAVPLREPLKIHE 105
Query: 87 ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
++Y L G+RV LCIA+CELVGG ES+ MP ACA EM+ T++L
Sbjct: 106 AMRYSLLAG--GKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSL 152
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 91/240 (37%), Positives = 146/240 (60%)
Query: 80 EGAAVPLILQYPTLPNHEGERVHGTL-CIASCELVGGNESSVMPLACAAEMLVTLALNRA 138
E A+P + H +H L C+ + +L G ++ E + LA A
Sbjct: 113 ESVALPAACAVEMI--HTMSLIHDDLPCMDNDDLRRGKPTNHKVFG---EDVAVLA-GDA 166
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSEL 195
L+ +A EH+AT T VSP R+VRAIGE++ A+G++G++AG+++++ S G DV L L
Sbjct: 167 LISFAFEHLATSTA-VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVL 225
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
+FI + L+EA+ V G ++GGGS+E++EKLR++ +C+GL +QV DDILD K +E
Sbjct: 226 EFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEEL 285
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D+ TYPKLMG+ +K +A +L+++A+++L FD +R PL LA+++ R
Sbjct: 286 GKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKR 345
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 66 YMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCELVGGNESS 119
YM KA +N+AL ++ P+ ++Y L G+RV LCIA+CELVGG ES
Sbjct: 58 YMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLAR--GKRVRPVLCIAACELVGGEESV 115
Query: 120 VMPLACAAEMLVTLAL 135
+P ACA EM+ T++L
Sbjct: 116 ALPAACAVEMIHTMSL 131
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 88/226 (38%), Positives = 140/226 (61%)
Query: 96 HEGERVHGTL-CIASCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKN- 153
H +H L C+ + +L G ++ E + LA ALL A EHM +
Sbjct: 138 HTSSLIHDDLPCMDNADLRRGKPTNHKVYG---EDMAVLA-GDALLALAFEHMTVVSSGL 193
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK--GKD-VSLSELDFIKRLRCGKLIEAS 210
V+P++++RA+ E++ A+GT G++AG+++++ S+ D V L L+FI + L+EA+
Sbjct: 194 VAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAA 253
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD----EATY 262
V GV++GGG+E++IEKLRKY +C+GL +QV DDILD K +E AG D + TY
Sbjct: 254 AVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTY 313
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
P+L+G+ G++ A++L EA ++L FDP++AAPL LA ++ RH
Sbjct: 314 PRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRH 359
Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 39/91 (42%), Positives = 54/91 (59%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PLILQ----YPTLPNHEGERVHGT 104
KSN+NN + ++ YM KA+ +N AL + PL +Q Y L G+RV
Sbjct: 56 KSNDNNSAFDFKL--YMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAG--GKRVRPL 111
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL 135
LCIA+CELVGG+E++ M ACA EM+ T +L
Sbjct: 112 LCIAACELVGGDEATAMSAACAVEMIHTSSL 142
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 88/226 (38%), Positives = 136/226 (60%)
Query: 96 HEGERVHGTL-CIASCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKN- 153
H +H L C+ +L G ++ E + LA ALL A EHM +
Sbjct: 135 HTSSLIHDDLPCMDDADLRRGKPTNHKEFG---EDMAVLA-GDALLALAFEHMTFVSNGL 190
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLRCGKLIEAS 210
V+P+R++RA+ E++ A+GT+G++AG++ ++ S+G DV L L+FI + L+EA+
Sbjct: 191 VAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAA 250
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD----EATY 262
V G ++GGG+EE+IEKLRKY +C+GL +QV DDILD + KE AG D + TY
Sbjct: 251 AVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTY 310
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
P+L+G+ ++ A++L EA ++L FD +AAPL LA ++ RH
Sbjct: 311 PRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRH 356
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 37/91 (40%), Positives = 50/91 (54%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PLILQ----YPTLPNHEGERVHGT 104
KSN+ N YM KA+ ++ AL + PL +Q Y L G+RV
Sbjct: 53 KSNDRNS--AFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAG--GKRVRPL 108
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL 135
LCIA+CELVGG+E++ M ACA EM+ T +L
Sbjct: 109 LCIAACELVGGDEATAMSAACAVEMIHTSSL 139
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 85/226 (37%), Positives = 136/226 (60%)
Query: 96 HEGERVHGTL-CIASCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKN- 153
H +H L C+ +L G ++ E + LA ALL A EHM +
Sbjct: 138 HTSSLIHDDLPCMDDADLRRGKPTNHKVFG---EHMAVLA-GDALLALAFEHMTVVSSGL 193
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK---DVSLSELDFIKRLRCGKLIEAS 210
V+P+R++R++ E++ A+GT+G++AG++ ++ S+G DV L L+FI + L+EA+
Sbjct: 194 VAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAA 253
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD----EATY 262
V G +IGGG+EE+I+KLRKYG+C+GL +QV DDI+D + +E AG D + TY
Sbjct: 254 AVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTY 313
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
P+L+G+ ++ A++L EA ++L FD + APL LA ++ RH
Sbjct: 314 PRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRH 359
Score = 132 (51.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 38/91 (41%), Positives = 50/91 (54%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PLILQ----YPTLPNHEGERVHGT 104
KSN+ N F YM KA+ ++ AL PL +Q Y L G+RV
Sbjct: 56 KSNDRN-FA-FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAG--GKRVRPL 111
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL 135
LCIA+CELVGG+E++ M ACA EM+ T +L
Sbjct: 112 LCIAACELVGGDEATAMSAACAVEMIHTSSL 142
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 284 (105.0 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 63/163 (38%), Positives = 107/163 (65%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVV 212
V DRL+ I EI+ G+RG++ G+++++ S+G K++ L+ + +I + G LI+AS+
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 213 CGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA----TYPK 264
G ++GG + + ++ + +YG+ +GLA+Q+ DDILD + K+AG DEA TYP
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPA 253
Query: 265 LMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++G+A +KR A+EL+ A + L+ FD RA PL +A ++VSR
Sbjct: 254 VLGLAESKRRAQELLDLAIEALSPFDH-RADPLREIARYIVSR 295
Score = 90 (36.7 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+RV L +A+C+ VGG+ + +P ACA EM+ T +L
Sbjct: 44 GKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSL 81
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 284 (105.0 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 63/163 (38%), Positives = 107/163 (65%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVV 212
V DRL+ I EI+ G+RG++ G+++++ S+G K++ L+ + +I + G LI+AS+
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 213 CGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA----TYPK 264
G ++GG + + ++ + +YG+ +GLA+Q+ DDILD + K+AG DEA TYP
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPA 253
Query: 265 LMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++G+A +KR A+EL+ A + L+ FD RA PL +A ++VSR
Sbjct: 254 VLGLAESKRRAQELLDLAIEALSPFDH-RADPLREIARYIVSR 295
Score = 90 (36.7 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+RV L +A+C+ VGG+ + +P ACA EM+ T +L
Sbjct: 44 GKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSL 81
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 241 (89.9 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 59/164 (35%), Positives = 94/164 (57%)
Query: 153 NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV 212
+ S + +R + ++ A G G++ G+ +++ S G + L+++ R + G LIEASV+
Sbjct: 131 DASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVI 190
Query: 213 CGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGD---DEATYP 263
G L G +E+ +++ L+ Y + +GLA+QV DDILD K++ D D+ TYP
Sbjct: 191 LGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYP 250
Query: 264 KLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L+G+A AK YA EL +A L FD A PL LA ++V R
Sbjct: 251 ALLGLAAAKEYALELRDQALHALRPFDAA-AEPLRELARYIVER 293
Score = 68 (29.0 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSL 80
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 221 (82.9 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 59/178 (33%), Positives = 96/178 (53%)
Query: 138 ALLCYAVEHMATKTK-NVSPDR-LVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSEL 195
AL A +H+ + T ++ P ++R I EI+ VG+ G+ AG+ +++ +G LS
Sbjct: 159 ALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS-- 214
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
F++ + G + E S VCG L+GG +E++++ LR+YG+ VG+ YQV DDI ++ KK +
Sbjct: 215 -FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDG 273
Query: 256 GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA-----PLYHLADFLVSRH 308
G ++ G A+EL +A +EL FD PLY D+ RH
Sbjct: 274 GAEK----------GMMEMAEELKEKAKKELQVFDNKYGGGDTLVPLYTFVDYAAHRH 321
Score = 92 (37.4 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 50 IKSNNNNPFPEIQID--EYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERV 101
I+S++++ + D Y T +IN+ L E V P ++Y L +R
Sbjct: 32 IRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQG-AKRA 90
Query: 102 HGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
+C+A+CEL GG+ + P ACA EM+ +L
Sbjct: 91 PPVMCVAACELFGGDRLAAFPTACALEMVHAASL 124
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 73/253 (28%), Positives = 128/253 (50%)
Query: 66 YMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTL-CIASCELVGGNESSVMPLA 124
+ TL+A + L GAA L + H VH L C+ +L G ++
Sbjct: 54 FATLQAFDKERNLGVGAACALEMI------HTYSLVHDDLPCMDDDDLRRGKPTNHKVFG 107
Query: 125 CAAEMLVTLALNRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
E + LA LL YA + MA K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 108 ---EAMAVLA-GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADM 163
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ D
Sbjct: 164 EAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRD 223
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD ++E G ++++TY L V AK E +A+A + +
Sbjct: 224 DILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQ-LQDE 282
Query: 296 PLYHLADFLVSRH 308
L + D + R+
Sbjct: 283 YLLSICDLIAKRN 295
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 73/253 (28%), Positives = 128/253 (50%)
Query: 66 YMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTL-CIASCELVGGNESSVMPLA 124
+ TL+A + L GAA L + H VH L C+ +L G ++
Sbjct: 54 FATLQAFDKERNLGVGAACALEMI------HTYSLVHDDLPCMDDDDLRRGKPTNHKVFG 107
Query: 125 CAAEMLVTLALNRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
E + LA LL YA + MA K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 108 ---EAMAVLA-GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADM 163
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ D
Sbjct: 164 EAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRD 223
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD ++E G ++++TY L V AK E +A+A + +
Sbjct: 224 DILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQ-LQDE 282
Query: 296 PLYHLADFLVSRH 308
L + D + R+
Sbjct: 283 YLLSICDLIAKRN 295
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 214 (80.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 60/189 (31%), Positives = 103/189 (54%)
Query: 128 EMLVTLALNRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
E + LA ALL A E A T + + +R+VR I E++ A G+ G++AG++++++S
Sbjct: 107 EAIAILA-GDALLTKAFELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSS 165
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
L +I + +LI S++ G ++ G +EE+I+ L YG+ +GLA+Q+ DD+L
Sbjct: 166 EAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLL 225
Query: 247 DNM----KKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + K K G DE TY L G+ K+ A+E + A L + +++
Sbjct: 226 DVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEINAAKNVLKPYGE-KSSFFI 284
Query: 299 HLADFLVSR 307
LA+F++ R
Sbjct: 285 KLAEFILKR 293
Score = 44 (20.5 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+R+ L +A+ E G ++P A E L T +L
Sbjct: 44 GKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSL 81
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 214 (80.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 60/189 (31%), Positives = 103/189 (54%)
Query: 128 EMLVTLALNRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
E + LA ALL A E A T + + +R+VR I E++ A G+ G++AG++++++S
Sbjct: 107 EAIAILA-GDALLTKAFELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSS 165
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
L +I + +LI S++ G ++ G +EE+I+ L YG+ +GLA+Q+ DD+L
Sbjct: 166 EAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLL 225
Query: 247 DNM----KKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + K K G DE TY L G+ K+ A+E + A L + +++
Sbjct: 226 DVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEINAAKNVLKPYGE-KSSFFI 284
Query: 299 HLADFLVSR 307
LA+F++ R
Sbjct: 285 KLAEFILKR 293
Score = 44 (20.5 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+R+ L +A+ E G ++P A E L T +L
Sbjct: 44 GKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSL 81
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 218 (81.8 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 56/164 (34%), Positives = 92/164 (56%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DR + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V G L
Sbjct: 137 DR-ISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL 195
Query: 217 IGGGS-EEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + L KY + +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 196 SAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLG 255
Query: 268 VAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 256 LEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 213 (80.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 61/191 (31%), Positives = 103/191 (53%)
Query: 126 AAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
A + L TLA + +L M T + P + V+ I ++ A G +G+ G+ +++ +
Sbjct: 113 AGDALQTLAFD--ILANHTFSMNQSTAGM-PIQ-VKLIQQLVKASGYQGMCGGQALDLAA 168
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEK-LRKYGKCVGLAYQVWDD 244
GK++SL EL+ + L+ G L+EASV+ + G + + L +Y + +GLAYQV DD
Sbjct: 169 TGKNISLGELEVLHSLKTGALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDD 228
Query: 245 ILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
I+D ++E G +++TYP L+G+ GA+ A+ L+ +A Q L+ P
Sbjct: 229 IIDLTSTEEELGKPVGSDIAANKSTYPALLGLQGAQDKAENLLQQALQALSRL-PYNTQS 287
Query: 297 LYHLADFLVSR 307
L A F+V R
Sbjct: 288 LADFATFIVKR 298
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 195 (73.7 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 55/180 (30%), Positives = 96/180 (53%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL A + +A+ + P V I ++ A G RG++ G+++++ + L+ +
Sbjct: 117 ALLTLAFKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITR 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN--------- 248
++RL+ G LI ++ G +IG E + L + +GLAYQ+ DDILD
Sbjct: 177 MQRLKTGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGK 236
Query: 249 -MKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ K K+AG +A + L+GV GA++ + L A+A + LA F +A L H D++++R
Sbjct: 237 AVSKDKDAG--KANFVTLLGVDGARQRVRLLAAQAKEHLAIFRD-KAHILLHSVDYVLNR 293
Score = 38 (18.4 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML 130
+++ L N G+R+ + + + G +E S++ A A E +
Sbjct: 37 MRHAALAN--GKRMRPFFVLETGAMFGASEKSLLRTAAALECI 77
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 179 (68.1 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 52/153 (33%), Positives = 87/153 (56%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGK---LIEASVVCGVLIGGGSE 222
++ A G RG++ G+ ++I ++ L+ LD I RL+ GK LIE + G ++ G
Sbjct: 139 LAQAAGARGMVLGQALDIAAETAPKPLT-LDQITRLQAGKTGALIEWAAAAGAVLAGA-- 195
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILD---NMKK-----KKEAGDDEATYPKLMGVAGAKRY 274
D + LR+Y + +GLA+Q+ DDILD + +K +K+AG +AT+ L+G+ AK
Sbjct: 196 -DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKATFVSLLGLDAAKAR 254
Query: 275 AKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
A++LV + L + RA L A F+++R
Sbjct: 255 ARDLVDQGCAALDGYGE-RAGTLKEAARFVIAR 286
Score = 41 (19.5 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 81 GAAVPL-ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
GA PL I + G+R+ G L + S L +E+ + A A E L +L
Sbjct: 22 GALEPLDITRAMAWTTEGGKRLRGFLVLESARLHDVDEARAIWPATAIEALHAYSL 77
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 179 (68.1 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 52/153 (33%), Positives = 87/153 (56%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGK---LIEASVVCGVLIGGGSE 222
++ A G RG++ G+ ++I ++ L+ LD I RL+ GK LIE + G ++ G
Sbjct: 139 LAQAAGARGMVLGQALDIAAETAPKPLT-LDQITRLQAGKTGALIEWAAAAGAVLAGA-- 195
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILD---NMKK-----KKEAGDDEATYPKLMGVAGAKRY 274
D + LR+Y + +GLA+Q+ DDILD + +K +K+AG +AT+ L+G+ AK
Sbjct: 196 -DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKATFVSLLGLDAAKAR 254
Query: 275 AKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
A++LV + L + RA L A F+++R
Sbjct: 255 ARDLVDQGCAALDGYGE-RAGTLKEAARFVIAR 286
Score = 41 (19.5 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 81 GAAVPL-ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
GA PL I + G+R+ G L + S L +E+ + A A E L +L
Sbjct: 22 GALEPLDITRAMAWTTEGGKRLRGFLVLESARLHDVDEARAIWPATAIEALHAYSL 77
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 187 (70.9 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 48/178 (26%), Positives = 90/178 (50%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E + ++ ++ + + ++ A G RG+ G+ +++ S K + L L
Sbjct: 115 ALQTLAFEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
+ ++ G LI +V ++ ++ + + ++ VGLA+QV DDILD + +E G
Sbjct: 175 LHNMKTGALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234
Query: 257 ----DDEA---TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D E+ T+P+L+G+ GAK A +L+ EA LA P + + A +++ R
Sbjct: 235 PQGSDAESNKSTFPQLLGLQGAKDTATQLIQEALSALAKL-PYNSQLIADFARYIIER 291
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 58/189 (30%), Positives = 96/189 (50%)
Query: 128 EMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
+ L TLA +L A +T+ V+ +++A+ E S G +G+ G+ +++ ++
Sbjct: 113 DALQTLAFT--ILAEGDLSAAGETQRVA---MLQALAEAS---GAQGMCLGQALDLAAEN 164
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDIL 246
+ +SL EL+ I R + G L+ ++ G L G + L +Y + VGLA+QV DDIL
Sbjct: 165 RLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDIL 224
Query: 247 DNMKK-----KKEAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + K + D E +TYP L+G+ GA++ A L+ EA L P L
Sbjct: 225 DIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEALLALEAI-PYNTEHLE 283
Query: 299 HLADFLVSR 307
A ++V R
Sbjct: 284 EFARYVVER 292
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 58/189 (30%), Positives = 96/189 (50%)
Query: 128 EMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
+ L TLA +L A +T+ V+ +++A+ E S G +G+ G+ +++ ++
Sbjct: 113 DALQTLAFT--ILAEGDLSAAGETQRVA---MLQALAEAS---GAQGMCLGQALDLAAEN 164
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDIL 246
+ +SL EL+ I R + G L+ ++ G L G + L +Y + VGLA+QV DDIL
Sbjct: 165 RLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDIL 224
Query: 247 DNMKK-----KKEAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + K + D E +TYP L+G+ GA++ A L+ EA L P L
Sbjct: 225 DIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEALLALEAI-PYNTEHLE 283
Query: 299 HLADFLVSR 307
A ++V R
Sbjct: 284 EFARYVVER 292
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 150 (57.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/111 (32%), Positives = 62/111 (55%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL C A E +A + KN+ R I +++A G+ G+ G+ +++ K K+ + +++
Sbjct: 113 ALQCLAFEVLA-RDKNI------RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEI 165
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILD 247
+ RL+ G L ++ G L G +E ++KLRK G VGL +Q DD+ D
Sbjct: 166 VHRLKTGALFSTAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLAD 216
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 150 (57.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/111 (32%), Positives = 62/111 (55%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL C A E +A + KN+ R I +++A G+ G+ G+ +++ K K+ + +++
Sbjct: 113 ALQCLAFEVLA-RDKNI------RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEI 165
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILD 247
+ RL+ G L ++ G L G +E ++KLRK G VGL +Q DD+ D
Sbjct: 166 VHRLKTGALFSTAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLAD 216
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 129 (50.5 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 44/175 (25%), Positives = 82/175 (46%)
Query: 131 VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV 190
+ + ALL A E ++T + SP I ++ A+G +G++ G+I++ + KD
Sbjct: 101 IAILTGDALLTLAFEILSTIDE--SPFIRCCMIKALAKALGYQGMIQGQILDTETIAKDT 158
Query: 191 SLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD-NM 249
+ ++ I L+ + + G ++G S ++ L YG +G A+QV DDI D N
Sbjct: 159 N--DIQAIHVLKTAQFFSVACELGGILGNASNIELNALANYGLNLGHAFQVKDDIADANQ 216
Query: 250 KKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFL 304
K K ++ A+ Y L+ ++ + L +A L+ LA+F+
Sbjct: 217 DKSKN------NILNILNNEDAQNYLNSLIDKSIEHLTILSH-KADILHSLAEFI 264
Score = 44 (20.5 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+ + L AS ++ N ++P++ A E++ +L
Sbjct: 36 GKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYSL 73
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 100 (40.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 26/101 (25%), Positives = 53/101 (52%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC--GVLI 217
+R + IS A T + G ++++ D+ +++ +I+ ++ + S C G ++
Sbjct: 127 LRILKVISGA--TTIIAEGEVLQLLCTS-DLEMTQERYIEVVKSKTAVLLSAACEAGAIL 183
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDD 258
G S E E LR +G +G+A+Q+ DD LD +++ G +
Sbjct: 184 GTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKE 224
Score = 64 (27.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 250 KKKKEAGDDEATYP---KLMGVAGAKRYAKELVAEANQEL-AYFDPTRAAPLYHLADFLV 305
K+ E GD E+ + K G+ A E +A L A+ D A L LAD++V
Sbjct: 259 KEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCKAHLGAFVDSQEKAALIELADYVV 318
Query: 306 SRHK 309
+R +
Sbjct: 319 NRKR 322
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
G+R+ L + S +L G +PLA E + T L
Sbjct: 42 GKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATL 79
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 131 (51.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/179 (25%), Positives = 92/179 (51%)
Query: 129 MLVTLALN-RALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
+LV ALN A L + H+ + K ++ I ++ G G++ G+ ++ +
Sbjct: 105 ILVGDALNTEAFLVLSHAHLKDEIK-------IKLIKTLAFNAGLNGMVIGQAIDCFFED 157
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
K +SL+EL+F+ + +LI A++ G I + E+ ++ K G +GL +Q+ DDI+D
Sbjct: 158 KRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIID 217
Query: 248 NMKKKKEAG----DD--EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
++++G +D + ++ L+G+ A + + L+ E Q+L + A + +L
Sbjct: 218 VTTSQEQSGKPTNNDIHKNSFVNLLGLEQAIKTKENLLNECEQDLEKLNEKLAQMIQNL 276
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 175 VLAGRIMEINSKGKDV-SLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGK 233
++ G++ E ++V S+ + + + + G LI A+ G + G ++E +E+L + G
Sbjct: 154 LVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGG 213
Query: 234 CVGLAYQVWDDILDNMKKKKEAG 256
VG A+Q+ DDI+D + E+G
Sbjct: 214 VVGTAFQIADDIIDIDSESDESG 236
Score = 61 (26.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 267 GVAGAKRYAKELVAEANQELAYFD--PTRAAPLYHLADFLVSRH 308
G+A AK + A+A ELA P R A L L D+ VSRH
Sbjct: 292 GMARAKDVLAQYAAQARHELALLPDVPGRRA-LAALVDYTVSRH 334
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 172 TRGVLA-GRIMEINSKGKDVSLSELDFIKRLRC--GKLIEASVVCGVLIGGGSEEDIEKL 228
T VLA G ++++ + D +E +++ + C KL EA+ + ++ G S E L
Sbjct: 146 TTNVLAEGEVLQLMNCN-DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETAL 204
Query: 229 RKYGKCVGLAYQVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVA 280
YGK +G A+Q+ DD+LD K GDD A T P + +A K+L+
Sbjct: 205 GDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTEEEKQLIR 264
Query: 281 EANQE 285
+A ++
Sbjct: 265 QAIEQ 269
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 110 (43.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 47/183 (25%), Positives = 85/183 (46%)
Query: 138 ALLCYAVEHMATKT-KNVSP--DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSE 194
ALLC +++ K+ +SP +++++ G+ + G ++++ K +D S E
Sbjct: 114 ALLCG--DYLIAKSIAFISPYGEKVIQDFGKAGMDMAE-----GEVLDL--KLEDESFGE 164
Query: 195 LDFIKRL--RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMK-- 250
D+ K + + L S G GG EE E+ +G +G AYQ+ DDIL+ ++
Sbjct: 165 NDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEVV 224
Query: 251 KKKEAGDDEATYPKLMGVAGAKRYA--KEL------VAEANQELAYFDPTRAAP-LYHLA 301
+ KE+ T P + + +K A K + VA A + L F A L+ +
Sbjct: 225 EGKESKFTSETLPHIYMKSTSKEEALKKSIDCVKLHVAAAKETLETFRECPARDKLFQIT 284
Query: 302 DFL 304
D++
Sbjct: 285 DYI 287
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/73 (21%), Positives = 37/73 (50%)
Query: 64 DEYMTLKAK-KINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMP 122
+EY ++A K + L E + ++++ + + G+R+ + + E+ G+ S +
Sbjct: 17 EEYRYVEAGIKESITLIEDPGLKKMVEH--VCHSGGKRIRPIILLLVSEICSGSYSRSLN 74
Query: 123 LACAAEMLVTLAL 135
A A EM+ + +L
Sbjct: 75 AALAVEMMHSASL 87
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRL--RCGKLIEASVVCGVLIGGGSEE 223
IS AV + G +M+++ G+ ++++ ++K + + LIEAS CG ++ G E+
Sbjct: 116 ISDAVVKLAI--GELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEK 172
Query: 224 DIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
D + YGK +GLA+Q+ DDILD +K G
Sbjct: 173 DFAE---YGKNLGLAFQMIDDILDIKSDEKILG 202
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 124 ACAAEMLVTLAL--NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIM 181
+C E LAL ALL E +++ ++ + + I IS A G RG++AG+ +
Sbjct: 105 SCHIEHGEALALLTGDALLTLTFELLSSMDESCTVKCAI--IRVISDACGHRGMVAGQAL 162
Query: 182 EINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
++ + + SL + I +L+ +L A+ G ++ S + + L YG+ +G A+Q
Sbjct: 163 DMGNL--EPSLEAVKQIHKLKTARLFSAACESGAILAEVSTANQQALASYGETLGCAFQA 220
Query: 242 WDDILDNMKKKKEAGDDEA-TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
DD+ D + DD +++G Y L+ ++ + L D A L L
Sbjct: 221 KDDLCDINE------DDSCLNIARILGREKTLEYIDYLLHQSEEYLERIDEDTAV-LKEL 273
Query: 301 ADFL 304
F+
Sbjct: 274 VAFI 277
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 124 ACAAEMLVTLAL--NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIM 181
+C E LAL ALL E +++ ++ + + I IS A G RG++AG+ +
Sbjct: 105 SCHIEHGEALALLTGDALLTLTFELLSSMDESCTVKCAI--IRVISDACGHRGMVAGQAL 162
Query: 182 EINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
++ + + SL + I +L+ +L A+ G ++ S + + L YG+ +G A+Q
Sbjct: 163 DMGNL--EPSLEAVKQIHKLKTARLFSAACESGAILAEVSTANQQALASYGETLGCAFQA 220
Query: 242 WDDILDNMKKKKEAGDDEA-TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
DD+ D + DD +++G Y L+ ++ + L D A L L
Sbjct: 221 KDDLCDINE------DDSCLNIARILGREKTLEYIDYLLHQSEEYLERIDEDTAV-LKEL 273
Query: 301 ADFL 304
F+
Sbjct: 274 VAFI 277
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 309 309 0.00079 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 605 (64 KB)
Total size of DFA: 201 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.99u 0.13s 27.12t Elapsed: 00:00:02
Total cpu time: 27.00u 0.13s 27.13t Elapsed: 00:00:02
Start: Fri May 10 06:11:32 2013 End: Fri May 10 06:11:34 2013