BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021668
(309 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 209/363 (57%), Gaps = 61/363 (16%)
Query: 3 SALMTSSMNTPLHHHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNP----- 57
S L+ S L +HSK PL K K ++ + N + + P
Sbjct: 13 SLLLKKSSFNGLKNHSKVPLANLKFLVPAKTKLTATATRVMVVSNSSAAAAAQEPIKIIA 72
Query: 58 ----FPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTL 105
P +EYM KAK +NKAL E A+PL ++Y L G+RV L
Sbjct: 73 PKIPLPAFPFEEYMATKAKHVNKALDE--AIPLQNPVKIHDAMRYSLLAG--GKRVRPVL 128
Query: 106 CIASCELVGGNESSVMPLACAAEMLVTLAL------------------------------ 135
CIA+CELVGG+E++ MP ACA EM+ T++L
Sbjct: 129 CIAACELVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAI 188
Query: 136 --NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
ALL ++ EH+A TKNVSPDR+VRAI E+ SAVG+ G++AG+I++I+S+GKDVS+S
Sbjct: 189 LAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVS 248
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
+L++I + KL+EASVVCG ++GG +E +E++RKY +C+GL +QV DDILD K +
Sbjct: 249 DLEYIHIHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSE 308
Query: 254 EAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E G D+ATYPKLMG+ A++ A +LV +ANQELAYFD +AAPLYH A+++
Sbjct: 309 ELGKTAGKDLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSAKAAPLYHFANYIA 368
Query: 306 SRH 308
SR
Sbjct: 369 SRQ 371
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 56/357 (15%)
Query: 3 SALMTSSMNTPLHHHSKTPLGKPKVAP-NPKASHV--PKSSSLDQAENLTIKSNNNNPFP 59
S L+ +N +++ +TPLG K AP +A++V P Q++ + KS + FP
Sbjct: 13 SLLLKKPINGLINNQPRTPLGHLKFAPLKIQATYVASPSFKQSFQSQEVGNKSQKVS-FP 71
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCE 111
+ EYM KA ++NKAL E AVPL Q+P N G+RV LCIASCE
Sbjct: 72 AFEFKEYMINKANQVNKALDE--AVPL--QHPQKINEAMRYSLLAGGKRVRPILCIASCE 127
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
LVGG+E MP ACA EM+ T++L AL
Sbjct: 128 LVGGDEGLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGDAL 187
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L A EH+A TKNVS DR+V+AI E+ S VG++G++AG+I++I+S+GK+VSLS L++I
Sbjct: 188 LSLAFEHVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEYIH 247
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--- 256
+ KL+EA+VVCG ++GG +E+LRKY + +GL +QV DDILD K +E G
Sbjct: 248 VHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEELGKTA 307
Query: 257 -----DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK++A +LV EANQ LA+FD +AAPLYH A+++ +R
Sbjct: 308 GKDLASDKATYPKLMGIDEAKKFAAQLVDEANQGLAFFDHVKAAPLYHFANYIATRQ 364
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 189/299 (63%), Gaps = 52/299 (17%)
Query: 58 FPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIAS 109
PE + EYM KA K+NKAL E A+P+ ++Y L G+RV LC+AS
Sbjct: 70 LPEFEFQEYMVTKAIKVNKALDE--AIPMQEPIKVHEAMRYSLLAG--GKRVRPILCMAS 125
Query: 110 CELVGGNESSVMPLACAAEMLVTLAL--------------------------------NR 137
CE+VGG+ES +P ACA EM+ T++L
Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGD 185
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL A EH+ATKT+NV+P R+V+AIGE+ SAVG+ G++AG+I+++ S+GK VSL+EL++
Sbjct: 186 ALLSLAFEHVATKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + + KL+EA+VVCG ++GGG+E D+E++R Y +C+GL +QV DDILD K E G
Sbjct: 246 IHQHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGK 305
Query: 258 --------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ A++YA EL+A+A EL+YFD +AAPLYH+A ++ +R
Sbjct: 306 TAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDSAKAAPLYHIASYIANRQ 364
>gi|350538439|ref|NP_001234087.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 187/299 (62%), Gaps = 52/299 (17%)
Query: 58 FPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIAS 109
PE + EYM KA K+NKAL E A+P+ ++Y L G+RV LC+AS
Sbjct: 70 LPEFEFQEYMVTKAIKVNKALDE--AIPMQEPIKVHEAMRYSLLAG--GKRVRPILCMAS 125
Query: 110 CELVGGNESSVMPLACAAEMLVTLAL--------------------------------NR 137
CE+VGG+ES +P ACA EM+ T++L
Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGD 185
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL A EH+ATKT+NV P R+V+AIGE+ SAVG+ G++AG+I+++ S+GK VSL+EL++
Sbjct: 186 ALLSLAFEHVATKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + KL+EA+VVCG ++GGG+E D+E++R Y +C+GL +QV DDILD K E G
Sbjct: 246 IHHHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGK 305
Query: 258 --------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ A++YA EL+A+A EL+YFD +AAPLYH+A ++ +R
Sbjct: 306 TAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDYAKAAPLYHIASYIANRQ 364
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 189/299 (63%), Gaps = 52/299 (17%)
Query: 58 FPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIAS 109
P+ +EYM +KA K+NKAL + A+P+ ++Y L G+RV LC+AS
Sbjct: 70 LPKFDFEEYMKMKAIKVNKALDD--AIPMQEPIKIHEAMRYSLLAG--GKRVRPILCMAS 125
Query: 110 CELVGGNESSVMPLACAAEMLVTLAL--------------------------------NR 137
CE+VGG+ES +P AC+ EM+ T++L
Sbjct: 126 CEVVGGDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGD 185
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL A EH+A+KTK+V+P R+V+A+GE+ SAVG++G++AG+I++I S+GK VSL+EL++
Sbjct: 186 ALLSLAFEHVASKTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEY 245
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + GKL+EA+VVCG +IGGG+E ++E++R Y +C+GL +QV DDILD K +E G
Sbjct: 246 IHNHKTGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGK 305
Query: 258 --------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ A+ A ELVA+A EL+YFD +AAPLYH A+++ R
Sbjct: 306 TAGKDLVTDKATYPKLMGLEKARELAGELVAKAMDELSYFDAAKAAPLYHFANYIAHRQ 364
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 191/319 (59%), Gaps = 51/319 (15%)
Query: 39 SSSLDQAENLT--IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PLI----LQY 90
+S+L Q+ N+ + + P PE + YM KKINKAL E V P I ++Y
Sbjct: 50 NSTLVQSVNVQELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRY 109
Query: 91 PTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------- 135
L G+RV LCIASCELVGG ES MP+ACA EM+ T++L
Sbjct: 110 SLLAG--GKRVRPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRR 167
Query: 136 -----------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAG 178
ALL A EH+A T V+P R+VRAI E+ SAVG++G++AG
Sbjct: 168 GKPTNHKVYGEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAG 227
Query: 179 RIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLA 238
+IM+I ++GKDV L++L++I + KL+EASVVCG ++GGG+ ++E+LRKY +C+GL
Sbjct: 228 QIMDICNQGKDVDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLL 287
Query: 239 YQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYF- 289
+QV DDILD K E G D+ TYPKLMG+ AKR+A ELVA+A +EL+YF
Sbjct: 288 FQVVDDILDVTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFG 347
Query: 290 DPTRAAPLYHLADFLVSRH 308
TR APLYHLA ++ RH
Sbjct: 348 SSTRVAPLYHLAKYIAYRH 366
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 194/324 (59%), Gaps = 55/324 (16%)
Query: 36 VPKSSSLDQAENLTIKSNNNNP---FPEIQIDEYMTLKAKKINKALFEGAAVPL------ 86
V SS + Q T +S + +P P +EYM LKA +N+AL AVPL
Sbjct: 50 VSDSSPVTQPLETTQESLSFSPKILLPNFPFEEYMVLKANNVNEAL--DKAVPLNHPLKI 107
Query: 87 --ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------- 135
++Y L G+RV LCIA+CELVGG+E++ MP ACA EM+ T++L
Sbjct: 108 HAAMRYSLLAG--GKRVRPILCIAACELVGGDEAAAMPSACAMEMIHTMSLIHDDLPCMD 165
Query: 136 -----------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGT 172
A+L A EH+A TKNVSP+R+VR I E+ SAVG+
Sbjct: 166 NDDLRRGKPTNHKMFGEETAILAGDAMLSLAFEHIARATKNVSPERVVRVITELGSAVGS 225
Query: 173 RGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYG 232
G++AG+I+++ S+GK+V++ +L++I + KL+EA+VVCG + GG +E IE++RKY
Sbjct: 226 EGLVAGQIVDVCSEGKEVNVKDLEYIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYA 285
Query: 233 KCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQ 284
+C+GL +QV DDILD K +E G D+ATYPKL+G+ A++ A +LV EANQ
Sbjct: 286 RCIGLLFQVIDDILDVTKSSEELGKTAGKDLVSDKATYPKLLGIDEARKLAAKLVDEANQ 345
Query: 285 ELAYFDPTRAAPLYHLADFLVSRH 308
ELAYFD +AAPLYH A+++ SR
Sbjct: 346 ELAYFDSAKAAPLYHFANYIASRQ 369
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 186/308 (60%), Gaps = 54/308 (17%)
Query: 51 KSNNNNPFPEI--QIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGER 100
++N P + Q EYM K K++N+AL E AVPL ++Y L N G+R
Sbjct: 10 QTNQAQEVPSLAFQFKEYMLTKLKQVNEALEE--AVPLQHPIKIHEAMRYSLLGN--GKR 65
Query: 101 VHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------- 135
+ LCIASCELVGG+E MPLACA EM+ ++L
Sbjct: 66 MCPILCIASCELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFG 125
Query: 136 -------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK 188
ALL A EH+A+KTKNVSPD +VRAI E+ SA+G+RGV+AG+I++I+S+GK
Sbjct: 126 ECIAILAGDALLSLAFEHIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGK 185
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
+VS+ L++I + KL+EAS VCG ++GG + IE+LRKY + +GL YQV DDILD
Sbjct: 186 EVSMKTLEYIHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDA 245
Query: 249 MKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K +E G ++ATYPKLMG+ AK++A ELV +A +E+A FD +A PL+HL
Sbjct: 246 TKSSEELGKTAGKDLASNKATYPKLMGIDEAKKFAAELVEQAKKEIASFDSAKAVPLFHL 305
Query: 301 ADFLVSRH 308
AD++ R
Sbjct: 306 ADYIARRQ 313
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 190/319 (59%), Gaps = 51/319 (15%)
Query: 39 SSSLDQAENLT--IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PLI----LQY 90
+S+L Q+ N+ + + P PE + YM KKINKAL E V P I ++Y
Sbjct: 50 NSTLVQSVNVQELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRY 109
Query: 91 PTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------- 135
L G+RV LCIASCELVGG ES MP+ACA EM+ T++L
Sbjct: 110 SLLAG--GKRVRPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRR 167
Query: 136 -----------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAG 178
ALL A EH+A T V+P R+VRAI E+ SAVG++G++AG
Sbjct: 168 GKPTNHKVYGEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAG 227
Query: 179 RIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLA 238
+IM+I ++GKDV L++L++I + KL+EASVVCG ++GGG+ ++E+LRKY +C+GL
Sbjct: 228 QIMDICNQGKDVDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLL 287
Query: 239 YQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
+QV DDILD K E G D+ TYPKLMG+ AKR+A ELVA+A +EL+YF
Sbjct: 288 FQVVDDILDVTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFG 347
Query: 291 PT-RAAPLYHLADFLVSRH 308
+ R APLYHLA ++ R
Sbjct: 348 SSARVAPLYHLAKYIAYRQ 366
>gi|374639387|gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 197/342 (57%), Gaps = 68/342 (19%)
Query: 15 HHHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKI 74
H +T + K P +SS++ + L I P + +EYM KAKK+
Sbjct: 24 HQQPQTRISCNKTTP---------TSSIEMQQTLKIS-------PNFKFEEYMASKAKKV 67
Query: 75 NKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACA 126
N AL + AVPL ++Y L G+RV LC+ASCELVGG E++ +P+ACA
Sbjct: 68 NTALDD--AVPLQNPLKIHQAMRYSLLAG--GKRVRPVLCLASCELVGGEEAAAVPMACA 123
Query: 127 AEMLVTLALNRALL--------------CY------------------AVEHMATKTKNV 154
EM+ T++L L C+ A EH+A KT+NV
Sbjct: 124 LEMIHTMSLIHDDLPCMDNDDLRRGRPTCHKEFGEETAVLAGDALLALAFEHVAAKTRNV 183
Query: 155 SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG 214
R+V+AI E+ SAVG+ G++AG+I++++S+GK +SL EL++I + KL+EA+VVCG
Sbjct: 184 DERRVVQAIVELGSAVGSEGLVAGQIVDLSSEGKLLSLGELEYIHVHKTSKLLEAAVVCG 243
Query: 215 VLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLM 266
++GGG +E LRKY +CVGL +QV DDILD K +E G D+ATYP+LM
Sbjct: 244 AIMGGGGGAQVEALRKYARCVGLLFQVVDDILDVTKTSEELGKTAGKDLVTDKATYPRLM 303
Query: 267 GVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
G+ AK +A +L A A QEL+YFDP+RAAPLYHLA ++ SR
Sbjct: 304 GLRKAKDFAADLAAMAVQELSYFDPSRAAPLYHLAQYIASRQ 345
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 176/290 (60%), Gaps = 52/290 (17%)
Query: 67 MTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNES 118
M K ++NKAL E AVPL ++Y L G+RV LCIASCELVGG+E
Sbjct: 1 MIQKGNQVNKALDE--AVPLQHPRKIHEAMRYSLLAG--GKRVRPILCIASCELVGGDEE 56
Query: 119 SVMPLACAAEMLVTLAL-NRALLCY-------------------------------AVEH 146
MP ACA EM+ T++L + L C A EH
Sbjct: 57 LAMPTACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEH 116
Query: 147 MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKL 206
+A TKNVS DR+V+A+ E+ SAVG++G++AG++++I S+GK+VSLS L++I + KL
Sbjct: 117 VARNTKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKL 176
Query: 207 IEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DD 258
+EA+VVCG ++GG +E+LRKY + +GL +QV DDILD K +E G D
Sbjct: 177 LEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGKTAGKDLTSD 236
Query: 259 EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ATYPKL+G+ AK++A +L +ANQEL ++DP +AAPLYHLA ++ SR
Sbjct: 237 KATYPKLIGIDEAKKFAAQLTDQANQELGFYDPVKAAPLYHLASYIASRQ 286
>gi|75250205|sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 184/318 (57%), Gaps = 53/318 (16%)
Query: 40 SSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYP 91
S++ E T++ NNP P YM K IN+AL AA+PL ++Y
Sbjct: 56 SAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQAL--EAAIPLQEPAKIHESMRYS 113
Query: 92 TLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------- 135
L G+RV LC+A+CELVGGN+S MP ACA EM+ T++L
Sbjct: 114 LLAG--GKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRG 171
Query: 136 ----------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGR 179
ALL +A EH+A T NVS R+VRA+GE++ A+G G++AG+
Sbjct: 172 KPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQ 231
Query: 180 IMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLA 238
+++INS+G +V L +L+FI + KL+E +VV G ++GGG++E++EKLRKY + +GL
Sbjct: 232 VVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLL 291
Query: 239 YQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
+QV DDILD K +E G D+ TYPKL+G+ ++ +A++L EA ++LA FD
Sbjct: 292 FQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFD 351
Query: 291 PTRAAPLYHLADFLVSRH 308
P +AAPL LA+++ R
Sbjct: 352 PEKAAPLIALANYIAHRQ 369
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 184/318 (57%), Gaps = 53/318 (16%)
Query: 40 SSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYP 91
S++ E T++ NNP P YM KA IN+AL AA+PL ++Y
Sbjct: 56 SAIITKEEETLQEEQNNPPPSFDFKSYMLQKANSINQAL--EAAIPLQEPAKIHESMRYS 113
Query: 92 TLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------- 135
L G+RV LC+A+CELVGGN+S MP ACA M+ T++L
Sbjct: 114 LLAG--GKRVRPALCLAACELVGGNDSMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRG 171
Query: 136 ----------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGR 179
ALL +A EH+A T NVS R+VRA+GE++ A+G G++AG+
Sbjct: 172 KPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQ 231
Query: 180 IMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLA 238
+++INS+G +V L +L+FI + KL+E +VV G ++GGG++E++EKLRKY + +GL
Sbjct: 232 VVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLL 291
Query: 239 YQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
+QV DDILD K +E G D+ TYPKL+G+ ++ +A++L EA ++LA FD
Sbjct: 292 FQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFD 351
Query: 291 PTRAAPLYHLADFLVSRH 308
P +AAPL LA+++ R
Sbjct: 352 PEKAAPLIALANYIAYRQ 369
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 175/297 (58%), Gaps = 54/297 (18%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASCE 111
Q +EYM A+++N+AL + +VPL ++P L HE G+RV LCIASCE
Sbjct: 67 FQFEEYMAEMAERVNQALDD--SVPL--RHP-LKIHEAMRYSLLAGGKRVRPILCIASCE 121
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
LVGG+ + P+ACA EM+ T++L AL
Sbjct: 122 LVGGDPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGDAL 181
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L A EH+AT++ VS DR+VR I E+ VG+ G++ G+I++I S GK + LSEL++I
Sbjct: 182 LSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEYIH 241
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--- 256
+ L+EASVVCG ++GGG DIE+LRKY + +GL +QV DDILD K +E G
Sbjct: 242 LHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEELGKTA 301
Query: 257 -----DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK +A LVA+A++EL Y+D +AAPLYH AD++ R
Sbjct: 302 GKDLATDKATYPKLMGIDKAKEFADALVAQAHKELDYYDFAKAAPLYHFADYIAYRQ 358
>gi|356538045|ref|XP_003537515.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 355
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 190/336 (56%), Gaps = 58/336 (17%)
Query: 23 GKPK-VAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEG 81
G PK ++ P S VP + + ++ N YM KA +N+AL
Sbjct: 27 GTPKLISSFPLVSAVPTKEHTVTTQEIQLQDTPLN----FDFKGYMIAKAHTVNQAL--D 80
Query: 82 AAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL 133
AA+ L ++Y L G+RV LCIA+CELVGG E++ +P ACA EM+ T+
Sbjct: 81 AAIALRDPHKIHQAMRYSLLAG--GKRVRPVLCIAACELVGGTEATAIPAACAVEMIHTM 138
Query: 134 AL--------------------------------NRALLCYAVEHMATKTKNVSPDRLVR 161
+L ALL +A EH+A T+ VSP R+VR
Sbjct: 139 SLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHVAASTEGVSPSRVVR 198
Query: 162 AIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG 220
AIGE++ ++GT G++AG++++I+S+G +V L L+FI + L+EA+VV G ++GGG
Sbjct: 199 AIGELAKSIGTEGLVAGQVVDIDSEGVANVGLETLEFIHVHKTAALLEAAVVLGAIVGGG 258
Query: 221 SEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAK 272
S+E++EKLRK+ +C+GL +QV DDILD K +E G D+ TYPKL+G+ +K
Sbjct: 259 SDEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIDKSK 318
Query: 273 RYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+A+EL+ +A ++L+ FDP +AAPL+ L +++ R
Sbjct: 319 EFAQELLKDAKEQLSGFDPPKAAPLFALTNYIAYRQ 354
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 198/359 (55%), Gaps = 58/359 (16%)
Query: 1 MASALMTSSMNTPLHHHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPE 60
++ A + S + PL S +P+ P N K S S+ + + E + N N
Sbjct: 16 ISQATRSRSKSKPL---SFSPVSIPLFYRNSKRSVSYVSAIVTKDEETIQEEQNKNSSSS 72
Query: 61 IQID--EYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASC 110
+ D YM KA IN+AL AAV L ++Y L G+RV LC+A+C
Sbjct: 73 LGFDFKSYMVQKASAINQAL--EAAVSLREPLKIHESMRYSLLAG--GKRVRPALCLAAC 128
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG+ES MP ACA EM+ T++L A
Sbjct: 129 ELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDA 188
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDF 197
LL +A EH+A T NVSP R+VR +GE++ A+G G++AG++++I S+G +V L +L+F
Sbjct: 189 LLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEF 248
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + KL+E +VV G ++GGG++E++EKLRKY + +GL +QV DDILD K +E G
Sbjct: 249 IHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGK 308
Query: 258 --------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKLMG+ ++ +A++L EA ++LA FDP +AAPL LA+++ R
Sbjct: 309 TAGKDLVADKVTYPKLMGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAYRQ 367
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 192/347 (55%), Gaps = 60/347 (17%)
Query: 13 PLHHHSKTPLG----KPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMT 68
P + +K P+ KP PN S + S L + E + + N P YM
Sbjct: 32 PSFYFTKIPISVSPIKPSSKPNSSFSVL---SLLTKQEPIEAEEQN----PIFNFKSYMI 84
Query: 69 LKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMP 122
KA ++NKAL + ++ PL ++Y L G+RV LC+A+CELVGG E MP
Sbjct: 85 EKATRVNKALDDAVSLREPLKVHEAMRYSLLAG--GKRVRPVLCLAACELVGGTEPMAMP 142
Query: 123 LACAAEMLVTLAL--------------------------------NRALLCYAVEHMATK 150
ACA EM+ T++L ALL +A EH+A
Sbjct: 143 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS 202
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEA 209
T VSP R+VRAIGE++ ++G+ G++AG++++INS+G DV L +L+FI + L+E
Sbjct: 203 TAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLEFIHLHKTAALLEG 262
Query: 210 SVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEAT 261
+VV G ++GGGS+ED+EKLRK+ + +GL +QV DDILD K +E G D+ T
Sbjct: 263 AVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 322
Query: 262 YPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
YPKL+G+ +K +A++L +A ++L+ FD ++APL LA+++ R
Sbjct: 323 YPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAYRQ 369
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 191/345 (55%), Gaps = 66/345 (19%)
Query: 21 PLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQ---------IDEYMTLKA 71
P K + + AS+ P+ S++ LT + +N P +I+ YM KA
Sbjct: 25 PTRKSQPVSSFSASNFPQISAI-----LTKEHQSNAPEDKIKETQSKFEFDFKSYMLEKA 79
Query: 72 KKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPL 123
+N+AL AVPL ++Y L G+RV LCIA+CELVGG+ + MP
Sbjct: 80 NLVNQAL--DLAVPLKDPIKIHESMRYSLLAG--GKRVRPVLCIAACELVGGDGLTAMPA 135
Query: 124 ACAAEMLVTLAL--------------------------------NRALLCYAVEHMATKT 151
ACA EM+ T++L A+L +A EHMAT T
Sbjct: 136 ACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGDAMLSFAFEHMATAT 195
Query: 152 KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASV 211
K VS DR++RAIGE++ +G+ G++AG++++I S+G DV L L+FI + L+E SV
Sbjct: 196 KGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSV 255
Query: 212 VCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYP 263
V G ++GGGS+ +IEKLRK+ + +GL +QV DDILD K +E G D+ TYP
Sbjct: 256 VLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGKTAGKDLVSDKTTYP 315
Query: 264 KLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
KL+G+ ++ +A+EL +A ++L+ FDP +AAPL LA+++ R
Sbjct: 316 KLLGIEKSREFAEELNKDAQEQLSEFDPRKAAPLIALANYIAYRQ 360
>gi|449461425|ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 170/300 (56%), Gaps = 55/300 (18%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIAS 109
P EYM K +N AL AAV L+ P L HE G+RV LCIA+
Sbjct: 68 PTFNFKEYMVQKGASVNHAL--DAAV--FLREP-LRIHEAMRYSLMAGGKRVRPVLCIAA 122
Query: 110 CELVGGNESSVMPLACAAEMLVTLAL--------------------------------NR 137
CELVGGNES MP ACA EM+ T++L
Sbjct: 123 CELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 182
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL +A EH+A T VSP R+VRAIGE++ ++G G++AG++++INS+G D L +L+
Sbjct: 183 ALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLEQLE 242
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+I + L+EA+VV G ++GGGS ED+EKLR + + +GL +QV DDILD K E G
Sbjct: 243 YIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSNELG 302
Query: 257 D--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKLMG+ ++ +A++L +A ++L+ FDP +AAPL LA+++ R
Sbjct: 303 KTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIAYRQ 362
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 190/352 (53%), Gaps = 56/352 (15%)
Query: 7 TSSMNTPLHHHSKTPLGKPKVAPNPKASHVPKSS---SLDQAENLTIKSNNNNPFPEIQI 63
T S + P+ + L ++A + P SS L + E L + P
Sbjct: 20 TRSRSRPMSNFLSPGLKTLQIASTHQRQRKPMSSICAVLTEEETL----QEDQHKPTFDF 75
Query: 64 DEYMTLKAKKINKAL------FEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA +NKAL E A + ++Y L G+RV LC+A+CELVGG+E
Sbjct: 76 KSYMIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAG--GKRVRPVLCLAACELVGGSE 133
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S MP ACA EM+ T++L ALL +A E
Sbjct: 134 SMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAGDALLAFAFE 193
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCG 204
H+A T NVSP R+VRA+GE++ +G G++AG++++I S+G +V L +L+FI +
Sbjct: 194 HIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHIHKTA 253
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD------- 257
KL+E +VV G ++GGG++E++EKLR+Y + +GL +QV DDILD K +E G
Sbjct: 254 KLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQELGKTAGKDLV 313
Query: 258 -DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKLMG+ ++ +A++L+ EA + LA FD +AAPL LA+++ R
Sbjct: 314 ADKVTYPKLMGIEKSREFAEKLLNEARELLAGFDQEKAAPLIALANYIAYRQ 365
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 178/307 (57%), Gaps = 53/307 (17%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
+ N N+ P YM KA IN+AL AAVP+ ++Y L G+RV
Sbjct: 66 QDNFNSRPPTFDFKSYMLQKAASINQAL--DAAVPIREPTKIHESMRYSLLAG--GKRVR 121
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LC+A+CELVGGNES MP ACA EM+ T++L + L C
Sbjct: 122 PALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGED 181
Query: 143 ------------AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KD 189
A EH+A T NVSP R+VRA+GE++ A+G G++AG++++I S+G +
Sbjct: 182 VAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSE 241
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L +L+FI + KL+E +VV G ++GGG++E++EKLRKY + +GL +QV DDILD
Sbjct: 242 VGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVT 301
Query: 250 KKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K +E G D+ TYPKLMG+ ++ +A++L EA ++LA FDP +AAPL LA
Sbjct: 302 KSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDPEKAAPLIALA 361
Query: 302 DFLVSRH 308
+++ R
Sbjct: 362 NYIAYRQ 368
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 50/345 (14%)
Query: 11 NTPLHHHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLK 70
N K P+ P + S++ E+ +K + Y+ K
Sbjct: 24 NKTFTGFMKIPVKNPSFLKQKRPFSALSVSAIATKEDERVKEAGTQK-EQFNFKTYVAEK 82
Query: 71 AKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLA 124
A +NKAL E V P+I ++Y L G+RV LC+A+CELVGG++S+ MP A
Sbjct: 83 AISVNKALDEAVIVKDPPVIYEAMRYSLLAG--GKRVRPMLCLAACELVGGDQSNAMPAA 140
Query: 125 CAAEMLVTLAL--------------------------------NRALLCYAVEHMATKTK 152
CA EM+ T++L +LL +A E +AT T
Sbjct: 141 CAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAGDSLLAFAFEFIATATA 200
Query: 153 NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASV 211
VSP R++ AIGE++ ++GT G++AG++ +I G +V L L+FI + L+EASV
Sbjct: 201 GVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASV 260
Query: 212 VCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYP 263
V G ++GGG++E++EKLR++ +C+GL +QV DDILD K +E G D+ TYP
Sbjct: 261 VLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYP 320
Query: 264 KLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
KL+G+ AK +A EL +A Q+LA FDP +AAPL LAD++ +R
Sbjct: 321 KLLGLEKAKEFAAELNRDAKQQLADFDPHKAAPLVALADYIANRQ 365
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 186/333 (55%), Gaps = 60/333 (18%)
Query: 30 NPKA---SHVPKSSSLDQAENLTIKSNNNNPFPEIQID--EYMTLKAKKINKALFEGAAV 84
NPK+ +H+ S S +N S + P +D YM KA +NKAL +
Sbjct: 43 NPKSKSKTHLRFSISSILTKNPQESSQKTSKDPTFTLDFKTYMLEKASSVNKALEQA--- 99
Query: 85 PLILQYPTLPNHE---------GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL 135
++L+ P L HE G+RV LCIA+CELVGG ES+ MP ACA EM+ T++L
Sbjct: 100 -VLLKEP-LKIHESMRYSLLAGGKRVRPMLCIAACELVGGLESTAMPSACAVEMIHTMSL 157
Query: 136 --------------------------------NRALLCYAVEHMATKTKNVSPDRLVRAI 163
ALL ++ EH+A TK VS DR+VR I
Sbjct: 158 IHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLAFSFEHVAKSTKGVSSDRIVRVI 217
Query: 164 GEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE 222
GE++ +G+ G++AG++++I+S+G +V L L+FI + L+EASVV G ++GG +
Sbjct: 218 GELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEFIHVHKTAALLEASVVLGAIVGGADD 277
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRY 274
ED+EKLRK+ +C+GL +QV DDILD K +E G D+ TYPKL+G+ ++ +
Sbjct: 278 EDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLLGIEKSREF 337
Query: 275 AKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
A++L EA ++L FD +AAPL LA+++ R
Sbjct: 338 AEKLNREAQEQLEGFDSVKAAPLIALANYIAYR 370
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 182/330 (55%), Gaps = 57/330 (17%)
Query: 29 PNPKA----SHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV 84
PNPK+ S+ P S+ L + + K N P YM KA +NKAL + +
Sbjct: 46 PNPKSNISNSNTPLSAILTKDQ----KPQNPPTTPTFDFKSYMLQKADSVNKALDDSIPL 101
Query: 85 --PLILQ----YPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--- 135
PL +Q Y L G+R+ LCIA+CELVGG+ES+ MP ACA EM+ T++L
Sbjct: 102 TEPLKIQESMRYSLLAG--GKRIRPMLCIAACELVGGDESTAMPAACAVEMVHTMSLMHD 159
Query: 136 -----------------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEI 166
A+L ++ EH+A+ TK V +R+VR I E+
Sbjct: 160 DLPCMDNDDLRRGKPTNHKVFTEDVAVLAGDAMLAFSFEHVASLTKGVCSERIVRVIYEL 219
Query: 167 SSAVGTRGVLAGRIMEINSKGKD-VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI 225
+ VG G++AG++++I S+G D V L L+FI + L+E SVV G ++GGGS+E++
Sbjct: 220 AKCVGCEGLVAGQVVDICSEGMDEVGLEHLEFIHLNKTAALLEGSVVLGAILGGGSDEEV 279
Query: 226 EKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKE 277
EKLR + +C+GL +QV DDILD K KE G D+ TYPKL+G+ +K +A+
Sbjct: 280 EKLRNFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEKSKEFAER 339
Query: 278 LVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L EA + LA FD +AAPL LAD++ R
Sbjct: 340 LNREAKEHLAGFDQNKAAPLIALADYIAYR 369
>gi|225458370|ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 176/304 (57%), Gaps = 52/304 (17%)
Query: 52 SNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTL 105
+ PF +YM KA ++KAL E V P+ ++Y L G+RV L
Sbjct: 72 TQKETPF---SFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAG--GKRVRPAL 126
Query: 106 CIASCELVGGNESSVMPLACAAEMLVTLAL------------------------------ 135
C+A+CELVGG+ES+ MP ACA EM+ T++L
Sbjct: 127 CLAACELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAV 186
Query: 136 --NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSL 192
+LL +A EH+AT T VS R+V A+GE++ ++G G++AG++++I+S G+ DV L
Sbjct: 187 LAGDSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGL 246
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK 252
+L+FI + L+EA+VV G L+GGGS+E++EKLRKY + VGL +QV DDILD K
Sbjct: 247 DQLEFIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSS 306
Query: 253 KEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFL 304
+E G D+ATYPKLMG+ ++ +A+ L EA ++L+ FD +AAPL LAD++
Sbjct: 307 QELGKTAGKDLVTDKATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYI 366
Query: 305 VSRH 308
R
Sbjct: 367 AYRQ 370
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 191/354 (53%), Gaps = 61/354 (17%)
Query: 8 SSMNTPLHHH--SKTPLG--KPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQI 63
SS LH+H K P PK P +S S+ L + E +T + F
Sbjct: 23 SSTFNLLHYHPLKKVPFSFQTPK-QRRPTSSFSSISAVLTEQEAVTEDEEQKSTF---NF 78
Query: 64 DEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGG 115
YM KA +N+AL AAV L ++Y L G+RV LC+++CELVGG
Sbjct: 79 KSYMVQKANSVNQAL--DAAVLLREPQMIHEAMRYSLLAG--GKRVRPVLCLSACELVGG 134
Query: 116 NESSVMPLACAAEMLVTLAL--------------------------------NRALLCYA 143
+ES MP ACA EM+ T++L ALL YA
Sbjct: 135 DESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAYA 194
Query: 144 VEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLR 202
EH+A T V R++RAIGE++ ++G+ G++AG++++I+S+G +V L +L+FI +
Sbjct: 195 FEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHK 254
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD----- 257
L+EASVV G ++GGG++E +E+LR + +C+GL +Q DDILD K +E G
Sbjct: 255 TAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQELGKTAGKD 314
Query: 258 ---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYP+LMG+ ++ +A++L EA + L FDP +AAPL LA+++ R
Sbjct: 315 LVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIALANYIAYRQ 368
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 168/296 (56%), Gaps = 49/296 (16%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCEL 112
P D YM KAK +NKAL + PL ++Y L G+RV LCIA+CEL
Sbjct: 82 PAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAG--GKRVRPMLCIAACEL 139
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG+ES+ MP ACA EM+ T++L ALL
Sbjct: 140 VGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALL 199
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIK 199
+A EH+A TK P+R+VR +GE++ ++G+ G++AG+++++ S+G +V L L+FI
Sbjct: 200 SFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIH 259
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-- 257
+ L++ SVV G ++GGG EE++ KLRK+ C+GL +QV DDILD K KE G
Sbjct: 260 HHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTA 319
Query: 258 ------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYPKL+GV +K +A L EA ++L +F P RAAPL LA+++ R
Sbjct: 320 GKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYR 375
>gi|13431547|sp|Q43133.1|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 197/369 (53%), Gaps = 65/369 (17%)
Query: 1 MASALMTSSMNTPLHHHSKTPLGKPKVAPNPK------ASHVPKSS-SLDQAENLTIKSN 53
MAS++ LHHH T L + + P S PK + S + +L K +
Sbjct: 1 MASSVTPLGSWVLLHHHPSTILTQSRSRSPPSLITLKPISLTPKRTVSSSSSSSLITKED 60
Query: 54 NNNPFPEIQID--EYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHG 103
NN D Y+ KA +NKAL +AVPL ++Y L G+RV
Sbjct: 61 NNLKSSSSSFDFMSYIIRKADSVNKAL--DSAVPLREPLKIHEAMRYSLLAG--GKRVRP 116
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------------- 135
LCIA+CELVGG ES MP CA EM+ T++L
Sbjct: 117 VLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDV 176
Query: 136 ----NRALLCYAVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD- 189
ALL +A EH+A+ T + VSP R+VRA+GE++ A+GT G++AG++++I+S+G D
Sbjct: 177 AVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDL 236
Query: 190 --VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
V L L FI + L+EAS V G +IGGGS+E+IE+LRK+ +C+GL +QV DDILD
Sbjct: 237 NNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILD 296
Query: 248 NMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
K +E G D+ TYPKLMG+ ++ +A++L EA +L FD + APL
Sbjct: 297 VTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLA 356
Query: 300 LADFLVSRH 308
LA+++ +R
Sbjct: 357 LANYIANRQ 365
>gi|357518399|ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 372
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 191/344 (55%), Gaps = 52/344 (15%)
Query: 13 PLHHHSKTPLGKPKVAPN-PKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKA 71
P + +K P+ + P+ P +S S S + I++ NP YM KA
Sbjct: 32 PSFYFTKIPISVSPIKPSKPNSSSFSFSVSSLLTKQEPIEAEEQNPI--FNFKSYMIEKA 89
Query: 72 KKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLAC 125
++NKAL + ++ PL ++Y L G+RV LC+A+CELVGG E MP AC
Sbjct: 90 TRVNKALDDAVSLREPLKVHEAMRYSLLAG--GKRVRPVLCLAACELVGGTEPMAMPAAC 147
Query: 126 AAEMLVTLAL--------------------------------NRALLCYAVEHMATKTKN 153
A EM+ T++L ALL +A EH+A T +
Sbjct: 148 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVD 207
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVV 212
VSP R+VRAIGE++ ++G+ G++AG++++INS+G DV L L+FI + L+E +VV
Sbjct: 208 VSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVV 267
Query: 213 CGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPK 264
G ++GGGS+ED+EKLRK+ +GL +QV DDILD K +E G D+ TYPK
Sbjct: 268 LGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPK 327
Query: 265 LMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
L+G+ +K +A++L +A ++L+ FD ++APL LA+++ R
Sbjct: 328 LLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAYRQ 371
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 168/296 (56%), Gaps = 49/296 (16%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCEL 112
P D YM KAK +NKAL + PL ++Y L G+RV LCIA+CEL
Sbjct: 82 PAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAG--GKRVRPMLCIAACEL 139
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG+ES+ MP ACA EM+ T++L ALL
Sbjct: 140 VGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALL 199
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIK 199
+A EH+A TK P+R+VR +GE++ +VG+ G++AG+++++ S+G +V L L+FI
Sbjct: 200 SFAFEHVAAATKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEFIH 259
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-- 257
+ L++ SVV G ++GGG+EE++ KLRK+ C+GL +QV DDILD K KE G
Sbjct: 260 HHKTAALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKKA 319
Query: 258 ------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYPKL+GV + +A L EA ++L +F P RAAPL LA+++ R
Sbjct: 320 GKDLVADKTTYPKLIGVEKSMEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYR 375
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 184/320 (57%), Gaps = 54/320 (16%)
Query: 38 KSSSLDQAENLTIKSNNNNPFPEIQID--EYMTLKAKKINKALFEGAAVPL--------I 87
KS S+ + LT + + + E + D YM KA +N+AL + AVP+
Sbjct: 28 KSQSVSISALLTKEQQSKHTQLESEFDFKSYMVQKANTVNQALDD--AVPIREPKKIHES 85
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+RV LC+ASCELVGG++ S MP ACA EM+ T++L
Sbjct: 86 MRYSLLAG--GKRVRPILCLASCELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDNDD 143
Query: 136 --------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
ALL +A EH+AT TK+VS +R+VRAIGE++ +G+ G+
Sbjct: 144 FRRGKPTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGL 203
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCV 235
+AG++++I S+G DV L L+FI + L+E SVV G ++GGGS+ ++E+LRK+ + +
Sbjct: 204 VAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSI 263
Query: 236 GLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELA 287
GL +QV DDILD K +E G D+ TYPKL+G+ ++ +A++L EA ++L
Sbjct: 264 GLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNKEAQEQLK 323
Query: 288 YFDPTRAAPLYHLADFLVSR 307
FD +AAPL LA+++ R
Sbjct: 324 EFDIRKAAPLIALANYIAYR 343
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 185/336 (55%), Gaps = 49/336 (14%)
Query: 19 KTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKAL 78
++ P P+ K SSL + LT + + + ++ EY+ KA +NKAL
Sbjct: 25 RSRFRSPGFMPHLKMKFFTNPSSLSVSAVLTKEQESKSKKQAMEFKEYVLEKAISVNKAL 84
Query: 79 FEGAAV--PLI----LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVT 132
++ P++ ++Y L G+R+ LCIA+CELVGG ES+ MP ACA EM+ T
Sbjct: 85 ESAVSIKEPVMIHESMRYSLLAG--GKRIRPMLCIAACELVGGVESTAMPAACAVEMIHT 142
Query: 133 LAL-NRALLCY-------------------------------AVEHMATKTKNVSPDRLV 160
++L + L C A EH+AT TK VS DR+V
Sbjct: 143 MSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKGVSSDRIV 202
Query: 161 RAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
R IGE++ +G G++AG++++I S+G DV L L+FI + L+E SVV G ++GG
Sbjct: 203 RVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVVLGAILGG 262
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGA 271
+ED+EKLRK+ +C+GL +QV DDILD K ++ G D+ TYPKL+G+ +
Sbjct: 263 APDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLVADKVTYPKLIGIEKS 322
Query: 272 KRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ +A+EL EA +L FD +AAPL+ LA+++ R
Sbjct: 323 REFAEELNKEAKAQLVGFDQEKAAPLFALANYIAYR 358
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 179/312 (57%), Gaps = 55/312 (17%)
Query: 45 AENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNH 96
+EN ++++ PF D YM K +N+AL A+VPL ++Y L
Sbjct: 56 SENNNLQTHLETPF---NFDSYMLEKVNMVNEAL--DASVPLKDPIKIHESMRYSLLAG- 109
Query: 97 EGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------- 135
G+R+ +CIA+CE+VGGN + MP ACA EM+ T++L
Sbjct: 110 -GKRIRPMMCIAACEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFRRGKPISH 168
Query: 136 -----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL + EH+AT TK VS DR+VRAIGE++ +VG+ G++AG++++I
Sbjct: 169 KVYGEEMAVLTGDALLSLSFEHIATATKGVSKDRIVRAIGELARSVGSEGLVAGQVVDIL 228
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+G DV L L++I + L+E+SVV G ++GGGS++ IEKLRK+ + +GL +QV DD
Sbjct: 229 SEGADVGLDHLEYIHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDD 288
Query: 245 ILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K +E G D+ TYPKL+G+ ++ +A++L EA ++L+ FD +AAP
Sbjct: 289 ILDVTKSTEELGKTAGKDLLTDKTTYPKLLGIEKSREFAEKLNKEAQEQLSGFDRRKAAP 348
Query: 297 LYHLADFLVSRH 308
L LA++ R
Sbjct: 349 LIALANYNAYRQ 360
>gi|356559416|ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 169/297 (56%), Gaps = 49/297 (16%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAA------VPLILQYPTLPNHEGERVHGTLCIASCEL 112
P YM KA +NKAL + + + ++Y L G+RV LC+A+CEL
Sbjct: 72 PIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAG--GKRVRPVLCVAACEL 129
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG E++ MP ACA EM+ T++L ALL
Sbjct: 130 VGGEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL 189
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIK 199
+A EH+A T+ SP R+VRAIGE++ ++G+ G++AG++++INS+G DV L L+FI
Sbjct: 190 AFAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIH 249
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-- 257
+ L+E +VV G ++GGG+++++EKLRK+ + +GL +QV DDILD K +E G
Sbjct: 250 VHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTA 309
Query: 258 ------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ +K +A +L +A +L FDP +AAPL LA+++ R
Sbjct: 310 GKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYIAYRQ 366
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 168/296 (56%), Gaps = 53/296 (17%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
D YM KAK +NKAL AAV + ++Y L G+RV LCIA+CEL
Sbjct: 2 FDFDGYMLRKAKSVNKAL--EAAVQMKEPLKIHESMRYSLLAG--GKRVRPMLCIAACEL 57
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG+ES+ MP ACA EM+ T++L ALL
Sbjct: 58 VGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALL 117
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIK 199
+A EH+A TK P+R+VR +GE++ ++G+ G++AG+++++ S+G +V L L+FI
Sbjct: 118 SFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIH 177
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-- 257
+ L++ SVV G ++GGG EE++ KLRK+ C+GL +QV DDILD K KE G
Sbjct: 178 HHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTA 237
Query: 258 ------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYPKL+GV +K +A L EA ++L +F P RAAPL LA+++ R
Sbjct: 238 GKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYR 293
>gi|15234534|ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 173/296 (58%), Gaps = 57/296 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ KA+ +NKAL +AVPL ++Y L G+RV LCIA+CELVGG E
Sbjct: 79 YIITKAELVNKAL--DSAVPLREPLKIHEAMRYSLLAG--GKRVRPVLCIAACELVGGEE 134
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S+ MP ACA EM+ T++L ALL +A E
Sbjct: 135 STAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFE 194
Query: 146 HMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKR 200
H+A+ T + VSP R+VRA+GE++ A+GT G++AG++++I+S+G DV L L+FI
Sbjct: 195 HLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL 254
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--- 257
+ L+EAS V G ++GGGS+++IE+LRK+ +C+GL +QV DDILD K KE G
Sbjct: 255 HKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAG 314
Query: 258 -----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPK+MG+ ++ +A++L EA +L FD + APL LA+++ R
Sbjct: 315 KDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQ 370
>gi|225430848|ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 368
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 53/299 (17%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASC 110
P + Y+ KA +NKAL + AVP+ ++Y L G+RV LCIA+C
Sbjct: 73 PAFNFNAYILDKANSVNKALDD--AVPIREPVKVHESMRYSLLAG--GKRVRPVLCIAAC 128
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG+E++ MP ACA EM+ T++L A
Sbjct: 129 ELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDA 188
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDF 197
LL +A EHMAT T V P +VRA+GE++ ++G+ G++AG++++I S+G KDV L L++
Sbjct: 189 LLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEY 248
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + L+E +VV G ++GGGS E+IEKLRK+ +C+GL +QV DDILD K +E G
Sbjct: 249 IHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGK 308
Query: 258 --------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ ++ A++L +A +L+ FDP +AAPL L++++ R
Sbjct: 309 TAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQ 367
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 177/326 (54%), Gaps = 58/326 (17%)
Query: 36 VPKSSSLDQAENLTIKSNNNNPFPEIQID--EYMTLKAKKINKALFEGAAVPLILQYPTL 93
V S SL+ L ++ + + D +YM KA +N+AL AVP YP
Sbjct: 70 VMSSGSLNTVAQLVSEAETVKEKKDFEFDFKKYMYSKAISVNEAL--DKAVPT--HYPE- 124
Query: 94 PNHE---------GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------- 135
HE G+RV TLCIA+CELVGG E MP ACA EM+ T+ L
Sbjct: 125 KIHESMRYSLLAGGKRVRPTLCIAACELVGGTEDLAMPAACAMEMIHTMTLIHDDLPCMD 184
Query: 136 -----------------------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVG 171
ALL +A EH+A T K V +R++R I E+ ++G
Sbjct: 185 NDNLRRGKPTNHKAFGEDTAVLAGDALLSFAFEHIARSTSKTVESERVLRVICELGKSMG 244
Query: 172 TRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRK 230
+ G++AG+I++I S+G V L L++I + L+E SVV G +IGG SEE+IE+ R+
Sbjct: 245 SEGLVAGQIVDIASEGDTSVDLKTLEYIHLHKTAVLLECSVVSGAIIGGASEEEIERTRR 304
Query: 231 YGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
Y +CVGL +QV DDILD K +E G D+ATYPKLMG+ AK +A ELV +A
Sbjct: 305 YARCVGLLFQVVDDILDVTKTSEELGKTAGKDLISDKATYPKLMGLEKAKEFAVELVNKA 364
Query: 283 NQELAYFDPTRAAPLYHLADFLVSRH 308
+EL+YFDP +AAPL LAD++ R
Sbjct: 365 KEELSYFDPVKAAPLLGLADYIAFRQ 390
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 168/300 (56%), Gaps = 56/300 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASC 110
E EYM KA +N+AL AVPL +YP HE G+RV LCIA+C
Sbjct: 88 EFDFKEYMRSKAMSVNEAL--DRAVPL--RYPE-KIHEAMRYSLLAGGKRVRPILCIAAC 142
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG+E MP ACA E++ T++L A
Sbjct: 143 ELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDA 202
Query: 139 LLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
LL +A EH+A T K V DR++R + E+ A+G+ GV G++ +I S+G V L L+
Sbjct: 203 LLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLE 262
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+I + L+E SV G +IGG S+++IE++RKY +CVGL +QV DDILD K +E G
Sbjct: 263 WIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELG 322
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK +A EL+ +A +EL++F+PT+AAPL LAD++ R
Sbjct: 323 KTAAKDLLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQ 382
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 168/300 (56%), Gaps = 56/300 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASC 110
E EYM KA +N+AL AVPL +YP HE G+RV LCIA+C
Sbjct: 88 EFDFKEYMRSKAMSVNEAL--DRAVPL--RYPE-KIHEAMRYSLLAGGKRVRPILCIAAC 142
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG+E MP ACA E++ T++L A
Sbjct: 143 ELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDA 202
Query: 139 LLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
LL +A EH+A T K V DR++R + E+ A+G+ GV G++ +I S+G V L L+
Sbjct: 203 LLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLE 262
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+I + L+E SV G +IGG S+++IE++RKY +CVGL +QV DDILD K +E G
Sbjct: 263 WIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELG 322
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK +A EL+ +A +EL++F+PT+AAPL LAD++ R
Sbjct: 323 KTAAKDLLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQ 382
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 53/299 (17%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASC 110
P + Y+ KA +NKAL + AVP+ ++Y L G+RV LCIA+C
Sbjct: 13 PAFNFNAYILDKANSVNKALDD--AVPIREPVKVHESMRYSLLAG--GKRVRPVLCIAAC 68
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG+E++ MP ACA EM+ T++L A
Sbjct: 69 ELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDA 128
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDF 197
LL +A EHMAT T V P +VRA+GE++ ++G+ G++AG++++I S+G KDV L L++
Sbjct: 129 LLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEY 188
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + L+E +VV G ++GGGS E+IEKLRK+ +C+GL +QV DDILD K +E G
Sbjct: 189 IHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGK 248
Query: 258 --------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ ++ A++L +A +L+ FDP +AAPL L++++ R
Sbjct: 249 TAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQ 307
>gi|336359762|gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 167/289 (57%), Gaps = 49/289 (16%)
Query: 66 YMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCELVGGNESS 119
YM KA +NKAL + V PL ++Y L G+RV LCIA+CEL GG ES
Sbjct: 95 YMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAG--GKRVRPMLCIAACELFGGTESV 152
Query: 120 VMPLACAAEMLVTLAL--------------------------------NRALLCYAVEHM 147
MP ACA EM+ T++L ALL +A EH+
Sbjct: 153 AMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHI 212
Query: 148 ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKL 206
AT TK VS +R+VR +GE++ +G+ G++AG+++++ S+G DV L L+FI + L
Sbjct: 213 ATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAAL 272
Query: 207 IEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------D 258
+E SVV G ++GG ++E I KLRK+ +C+GL +QV DDILD K +E G D
Sbjct: 273 LEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVAD 332
Query: 259 EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ TYPKL+G+ ++ +A++L EA ++LA FDP +AAPL LA+++ R
Sbjct: 333 KVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYR 381
>gi|13431546|sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 167/289 (57%), Gaps = 49/289 (16%)
Query: 66 YMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCELVGGNESS 119
YM KA +NKAL + V PL ++Y L G+RV LCIA+CEL GG ES
Sbjct: 69 YMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAG--GKRVRPMLCIAACELFGGTESV 126
Query: 120 VMPLACAAEMLVTLAL--------------------------------NRALLCYAVEHM 147
MP ACA EM+ T++L ALL +A EH+
Sbjct: 127 AMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHI 186
Query: 148 ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKL 206
AT TK VS +R+VR +GE++ +G+ G++AG+++++ S+G DV L L+FI + L
Sbjct: 187 ATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAAL 246
Query: 207 IEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------D 258
+E SVV G ++GG ++E I KLRK+ +C+GL +QV DDILD K +E G D
Sbjct: 247 LEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVAD 306
Query: 259 EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ TYPKL+G+ ++ +A++L EA ++LA FDP +AAPL LA+++ R
Sbjct: 307 KVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYR 355
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 168/295 (56%), Gaps = 49/295 (16%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCELVG 114
+ YM KA +N+AL ++ PL ++Y L G+RV LCIA+CELVG
Sbjct: 71 FDLKSYMIQKANSVNQALETAVSLREPLKIHEAMRYSVLAG--GKRVRPVLCIAACELVG 128
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
G ES MP ACA EM+ T++L ALL +
Sbjct: 129 GEESMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAF 188
Query: 143 AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRL 201
+ EHM T VSP R+VRA+GE++ ++G+ G++AG++++I S+G DV L L+FI
Sbjct: 189 SFEHMTGSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLEFIHVH 248
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD---- 257
+ L+E SVV G ++GGGS+E++EKLRK+ +C+GL +QV DDILD K E G
Sbjct: 249 KTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSTELGKTAGK 308
Query: 258 ----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKLMG+ ++ +A+EL +A ++L FD +AAPL LA+++ R
Sbjct: 309 DLVADKVTYPKLMGIEKSREFAEELKNDAVEQLRGFDQEKAAPLIALANYIAYRQ 363
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 174/302 (57%), Gaps = 54/302 (17%)
Query: 57 PFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIA 108
P YM K IN+AL +AVPLI ++Y L G+RV +CIA
Sbjct: 40 PRSRFDFKSYMINKITSINEAL--DSAVPLIEPIKLHEAMRYTLLSG--GKRVRPIVCIA 95
Query: 109 SCELVGGNESSVMPLACAAEML--------------------------------VTLALN 136
+CELVGG+ES+VMP ACA EM+ +TL
Sbjct: 96 ACELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAV 155
Query: 137 RALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD--VSLSE 194
R+L AV+H+ T T+ V P+RLVRA+ E++ G++G AG+I ++ S G+D VS+ +
Sbjct: 156 RSLQALAVDHVVTATRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQ 215
Query: 195 LDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMK 250
L+ I + G L E SVV G +IGG SEE+IEKLRK+ KC+GL +Q+ DD+LD +M+
Sbjct: 216 LEHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVTKSSME 275
Query: 251 KKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVS 306
K AG D +ATYP+L+G+ ++ A +L +EA ++L+ FD +AAPL LAD++V+
Sbjct: 276 LGKPAGKDVVAAKATYPRLIGIEKSRELALKLNSEAKEQLSGFDQEKAAPLIALADYIVA 335
Query: 307 RH 308
R
Sbjct: 336 RQ 337
>gi|356498416|ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 350
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 181/320 (56%), Gaps = 51/320 (15%)
Query: 36 VPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAA------VPLILQ 89
V K + + LT+++ P + + YM KA +NKAL + + + ++
Sbjct: 34 VTKRRAFSLSAVLTVETEEKPPIFDFK--NYMLSKASAVNKALDDSVSLREPKKIHEAMR 91
Query: 90 YPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------- 135
Y L G+RV LC+A+CELVGG+E++ MP ACA EM+ T++L
Sbjct: 92 YSLLAG--GKRVRPVLCVAACELVGGHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLR 149
Query: 136 ------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLA 177
ALL +A EH+A T+ S R++RAIGE++ ++G+ G++A
Sbjct: 150 RGKPTNHTVFGEDVAVLAGDALLAFAFEHIAASTRGASAPRILRAIGELARSIGSEGLVA 209
Query: 178 GRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVG 236
G++++INS+G DV L L+FI + L+E +VV G ++GGG+++++EKLRK+ + +G
Sbjct: 210 GQVVDINSEGLADVGLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIG 269
Query: 237 LAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAY 288
L +QV DDILD K +E G D+ TYPKL+G+ +K +A +L +A +LA
Sbjct: 270 LLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAG 329
Query: 289 FDPTRAAPLYHLADFLVSRH 308
FDP +AAPL LA+++ R
Sbjct: 330 FDPVKAAPLIALANYIAYRQ 349
>gi|449448558|ref|XP_004142033.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 375
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 177/304 (58%), Gaps = 49/304 (16%)
Query: 53 NNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLC 106
N+ P + +YM K+ +N+AL E ++ PL ++Y L G+RV LC
Sbjct: 74 QNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAG--GKRVRPVLC 131
Query: 107 IASCELVGGNESSVMPLACAAEMLVTLAL------------------------------- 135
+A+C+LVGG+ES+ +P AC+ EM+ T++L
Sbjct: 132 LAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVL 191
Query: 136 -NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLS 193
ALL +A EHMA VSP+R+VRAIGE++ A GT G++AG++++I+S+G DV L
Sbjct: 192 AGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLE 251
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
L++I + L+EA+ V G ++GGGSEE+IEKLR + + +GL +QV DDILD K +
Sbjct: 252 LLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTE 311
Query: 254 EAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E G ++ATYPKLMG+ +K +A++L EA + LA FDP +A PL L++++
Sbjct: 312 ELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIA 371
Query: 306 SRHK 309
R +
Sbjct: 372 YRQR 375
>gi|449497746|ref|XP_004160506.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 340
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 177/304 (58%), Gaps = 49/304 (16%)
Query: 53 NNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLC 106
N+ P + +YM K+ +N+AL E ++ PL ++Y L G+RV LC
Sbjct: 39 QNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAG--GKRVRPVLC 96
Query: 107 IASCELVGGNESSVMPLACAAEMLVTLAL------------------------------- 135
+A+C+LVGG+ES+ +P AC+ EM+ T++L
Sbjct: 97 LAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVL 156
Query: 136 -NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLS 193
ALL +A EHMA VSP+R+VRAIGE++ A GT G++AG++++I+S+G DV L
Sbjct: 157 AGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLE 216
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
L++I + L+EA+ V G ++GGGSEE+IEKLR + + +GL +QV DDILD K +
Sbjct: 217 LLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTE 276
Query: 254 EAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E G ++ATYPKLMG+ +K +A++L EA + LA FDP +A PL L++++
Sbjct: 277 ELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIA 336
Query: 306 SRHK 309
R +
Sbjct: 337 YRQR 340
>gi|442743257|gb|AFC88470.2| geranylgeranyl pyrophosphate synthase 4 [Nicotiana tabacum]
Length = 372
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 176/335 (52%), Gaps = 62/335 (18%)
Query: 31 PKASHVPKSSSLDQAENLTIKSNNNNPFPE-------IQIDEYMTLKAKKINKALFEGAA 83
PK S+ + + E IK + N F E YM K K +N+AL AA
Sbjct: 44 PKVRAFCNSTDIAKNEAEVIK--HENTFREAGKTKTVFDFKSYMHQKIKSVNRAL--DAA 99
Query: 84 VPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML----- 130
VPL ++Y L EG+RV LCIA+CELVGG ES+ MP AC EM+
Sbjct: 100 VPLREPLKFHEAMRYSLLS--EGKRVCPVLCIAACELVGGQESTAMPAACGMEMVHAMCM 157
Query: 131 ---------------------------VTLALNRALLCYAVEHMATKTKNVSPDRLVRAI 163
VT+ +L+ A EHMAT T+ V P +VRAI
Sbjct: 158 MHDDLPCMDNDTLRRGKLSNHKVFGENVTVLAGYSLVALAFEHMATATQGVHPKTMVRAI 217
Query: 164 GEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE 222
GE++ +G G AG+++++ S GK D L EL++I R + EA+ + G ++GG +
Sbjct: 218 GELARLIGPEGAAAGQVLDLLSGGKSDTGLEELEYIHRHKTADFAEAAAIIGAMVGGATN 277
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDD----EATYPKLMGVAGAKRY 274
E+I +LRK+ +C+GL +QV DDILD K K AG D + TYPK++G+ +K Y
Sbjct: 278 EEINRLRKFSQCIGLLFQVVDDILDVTKSSEQLGKTAGKDLLANKLTYPKMIGIEKSKEY 337
Query: 275 AKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
A+ L EA ++L FDP +AAPL +ADF++ R K
Sbjct: 338 AQNLSKEAKEQLVGFDPEKAAPLLAMADFVLHRQK 372
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 178/317 (56%), Gaps = 52/317 (16%)
Query: 39 SSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV---PLI---LQYPT 92
S+ L E ++ PF + Y+ KA +NKAL + AV P+I ++Y
Sbjct: 52 SAVLTGEEARVSTQRDDAPF---NFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSL 108
Query: 93 LPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL----------------- 135
L G+RV LCIA+CE+VGG +S+ +P ACA EM+ T++L
Sbjct: 109 LAG--GKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGK 166
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
ALL +A E MAT T V+P+R++ A+GE++ A+GT G++AG++
Sbjct: 167 PTNHKVFGEDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQV 226
Query: 181 MEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAY 239
+++N G +V L L+FI + L+EASVV G ++GGGS + IEKLR + + +GL +
Sbjct: 227 VDLNCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLF 286
Query: 240 QVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD K +E G D+ TYPKL+G+ A +A++L EA +LA FDP
Sbjct: 287 QVVDDILDVTKSSEELGKTAGKDLAVDKTTYPKLLGLDKAMEFAEKLNEEAKAQLAGFDP 346
Query: 292 TRAAPLYHLADFLVSRH 308
++AAPL LAD++ R
Sbjct: 347 SKAAPLTALADYIAHRQ 363
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 183/345 (53%), Gaps = 50/345 (14%)
Query: 11 NTPLHHHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLK 70
N K P+ P + S++ E+ +K + Y+ K
Sbjct: 24 NKTFTGFMKIPVKNPSFLKQKRPFSALSVSAIATKEDEKVKEVETQK-EQFNFKTYVAEK 82
Query: 71 AKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLA 124
A +NKAL E V P+I ++Y L G+RV LC+A+CELVGG++S+ MP A
Sbjct: 83 AISVNKALDEAVIVKDPPVIHEAMRYSLLAG--GKRVRPMLCLAACELVGGDQSNAMPAA 140
Query: 125 CAAEMLVTLAL--------------------------------NRALLCYAVEHMATKTK 152
CA EM+ T++L +LL +A E++AT T
Sbjct: 141 CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATA 200
Query: 153 NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASV 211
VSP R++ AIGE++ ++GT G++AG++ +I G +V L L+FI + L+EASV
Sbjct: 201 GVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASV 260
Query: 212 VCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDEA----TYP 263
V G ++GGG++E++EKLR + +C+GL +QV DDILD K K AG D A TYP
Sbjct: 261 VLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVTKSSEVLGKTAGKDLAVDKTTYP 320
Query: 264 KLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
KL+G+ AK +A EL +A Q+L FDP +AAPL LAD++ R
Sbjct: 321 KLLGLEKAKEFAAELNRDAKQQLVEFDPHKAAPLIALADYIAYRE 365
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 167/290 (57%), Gaps = 49/290 (16%)
Query: 66 YMTLKAKKINKAL------FEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESS 119
Y+ K K +N+AL E + ++Y L G+RV LCIA+CELVGGNES
Sbjct: 22 YLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAG--GKRVRPILCIAACELVGGNESM 79
Query: 120 VMPLACAAEMLVTLAL--------------------------------NRALLCYAVEHM 147
MP ACA EM+ T++L ALL +A E++
Sbjct: 80 AMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFEYV 139
Query: 148 ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKL 206
A T VSP R++RAIGE++ +G+ G++AG++++I S G ++ L L+FI + L
Sbjct: 140 ANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKTAAL 199
Query: 207 IEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------D 258
+EASVV G ++GGG++E +E+LRK+ +C+GL +QV DDILD +E G D
Sbjct: 200 LEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLVAD 259
Query: 259 EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ATYPKL+G+ A+ +A++L EA ++L FDP +AAPL LA+F+ R
Sbjct: 260 KATYPKLLGLEKAREFAEKLKNEATEQLDEFDPEKAAPLLALAEFIAHRQ 309
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 171/296 (57%), Gaps = 57/296 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ KA+ +NKAL +AVPL + Y L G+RV LCIA+CELVGG E
Sbjct: 79 YIITKAELVNKAL--DSAVPLREPLKIHEAMSYSLLAG--GKRVRPVLCIAACELVGGEE 134
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S+ MP CA EM+ T++L ALL ++ E
Sbjct: 135 STAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFE 194
Query: 146 HMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKR 200
H+A+ T + VSP R+VRA+GE++ A+GT G++AG++++I+S+G DV L L+FI
Sbjct: 195 HLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL 254
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--- 257
+ L+EAS V G ++GGGS+++IE+LRK+ +C+GL +QV DDILD K KE G
Sbjct: 255 HKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAG 314
Query: 258 -----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPK+MG+ ++ +A++L EA +L FD + APL LA+++ R
Sbjct: 315 KDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQ 370
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 166/300 (55%), Gaps = 54/300 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCE 111
E ++YM KA +N+AL AVPL ++Y L G+RV LCIA+CE
Sbjct: 87 EFDFNKYMHAKAISVNQAL--DRAVPLRFPQKLHESMRYSILSG--GKRVRPVLCIAACE 142
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
LVGG E MP+ACA EM+ + L AL
Sbjct: 143 LVGGTEELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIAGVAL 202
Query: 140 LCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDF 197
L A EH+A T K V DR++R + E+ G++G++ G+ +++ S+G V+L L +
Sbjct: 203 LSVAFEHIAVSTSKTVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQTLQW 262
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + L+E+SVVCG +IGG SE++IE++R+Y CVG+ +QV DDILD K +E G
Sbjct: 263 IHAHKTAVLLESSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSEELGK 322
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
D+ATYPKLMG+ +K+++ EL+ A +EL+YFDP + APL LAD++ R K
Sbjct: 323 TAGKDLMSDKATYPKLMGLEKSKQFSIELLDRAKKELSYFDPAKTAPLLALADYIAFRQK 382
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 170/299 (56%), Gaps = 53/299 (17%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASC 110
P YM KA +NKAL AAV L ++Y L G+RV LC+A+C
Sbjct: 70 PTFDFKSYMLQKANSVNKAL--DAAVSLKEPAKIHESMRYSLLAG--GKRVRPVLCLAAC 125
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
+LVGG+ES +P ACA EM+ T++L A
Sbjct: 126 DLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDA 185
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDF 197
LL +A EH+A T +VSP R+VRAIGE++ A+G G++AG++++I S+G +V L +L+F
Sbjct: 186 LLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQLEF 245
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + KL+E +VV G ++GGG++E++EKLR Y + +GL +QV DDILD K +E G
Sbjct: 246 IHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQELGK 305
Query: 258 --------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYP+LMG+ ++ +A+ L+ EA LA F+ +AAPL LA+++ R
Sbjct: 306 TAGKDLVADKVTYPRLMGIEKSREFAERLLNEAKDMLAGFNQEKAAPLIALANYIAYRQ 364
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 190/354 (53%), Gaps = 76/354 (21%)
Query: 8 SSMNTPLHHHS------KTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEI 61
+S+ PL++HS K G P+ ++ P ++ LD
Sbjct: 40 TSIRKPLYYHSCSAILTKEQTGVPQEESESESEKKPAAAKLD------------------ 81
Query: 62 QIDEYMTLKAKKINKALFEGAAV---PL----ILQYPTLPNHEGERVHGTLCIASCELVG 114
Y+ KAK +NKAL EGA + PL ++Y L G+R+ LCIA+CELVG
Sbjct: 82 -FTAYVLGKAKSVNKAL-EGAVLVKEPLRIHESMRYSLLAG--GKRIRPMLCIAACELVG 137
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
G+E + MP ACA EM+ T++L ALL +
Sbjct: 138 GDEETAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAF 197
Query: 143 AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRL 201
A EH+AT TK S +++VR +GE++ ++G G++AG++++I S+G +V L L+FI
Sbjct: 198 AFEHIATATKGASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEFIHLH 257
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD---- 257
+ L+E SVV G ++GGG+EE+I KLRK+ + +GL +QV DDILD K KE G
Sbjct: 258 KTAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVTKSSKELGKTAGK 317
Query: 258 ----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYPKL+G+ ++ +A++L EA +L+ FD +AAPL LA+++ R
Sbjct: 318 DLVADKVTYPKLLGIQKSREFAEQLNNEAQAQLSGFDQEKAAPLIALANYIAYR 371
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 177/317 (55%), Gaps = 52/317 (16%)
Query: 39 SSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV---PLI---LQYPT 92
S+ L E ++ PF + Y+ KA +NKAL + AV P+I ++Y
Sbjct: 52 SAVLTGEEARVSTQRDDAPF---NFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSL 108
Query: 93 LPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL----------------- 135
L G+RV LCIA+CE+VGG +S+ +P ACA EM+ T++L
Sbjct: 109 LAG--GKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGK 166
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
ALL +A E MAT T V+P+R++ A+GE++ A+GT G++AG++
Sbjct: 167 PTNHKVFGKDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQV 226
Query: 181 MEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAY 239
+++N G +V L L+FI + L+EASVV G ++GGGS + IEKLR + + +GL
Sbjct: 227 VDLNCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLL 286
Query: 240 QVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD K +E G D+ TYPKL+G+ A +A++L EA +LA FDP
Sbjct: 287 QVVDDILDVTKSSEELGKTAGKDLAVDKTTYPKLLGLDKAVEFAEKLNEEAKAQLAGFDP 346
Query: 292 TRAAPLYHLADFLVSRH 308
++AAPL LAD++ R
Sbjct: 347 SKAAPLTALADYIAHRQ 363
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 168/279 (60%), Gaps = 40/279 (14%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA +NKAL +AV L ++Y L G+RV LCIA+CELVGG E
Sbjct: 54 YMIGKANSVNKAL--DSAVSLREPIKIHEAMRYSLLAG--GKRVRPVLCIAACELVGGEE 109
Query: 118 SSVMPLACAAEMLVTLAL----------------NRALLCYAVEHMATKTKNV-SPDRLV 160
+P ACA EM+ T++L ALL +A EH+AT+T + SP R+V
Sbjct: 110 FLALPAACAVEMIHTMSLIHDDLPFFGEDVAVLAGDALLSFAFEHLATETPEIISPARVV 169
Query: 161 RAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
RAIGE++ A+G+ G++AG+++++ S+G DV L L+FI + L+EA+ V G +
Sbjct: 170 RAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGLELLEFIHLHKTAVLLEAATVLGAIF 229
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVA 269
GGG+ E+IE+LRK+ +C+GL +QV DDILD K +E G D+ TYPKLMG+
Sbjct: 230 GGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLE 289
Query: 270 GAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+K +A++L+++A ++L FD + PL LA+++ R
Sbjct: 290 KSKDFAEKLLSDAQEQLHGFDSNKVKPLLALANYIGKRQ 328
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 164/265 (61%), Gaps = 37/265 (13%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ KA +NKAL +AVPL ++Y L G+RV LCIA+CELVGG E
Sbjct: 16 YIIRKADSVNKAL--DSAVPLREPLKIHEAMRYSLLAG--GKRVRPVLCIAACELVGGEE 71
Query: 118 SSVMPLACAAEMLVTLAL--------------NRALLCYAVEHMATKTKN-VSPDRLVRA 162
S MP ACA EM+ T++L ALL +A EH+A+ T + VSP R+VRA
Sbjct: 72 SLAMPAACAVEMIHTMSLIHDDVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRA 131
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE 222
+GE++ A+GT G++AG++++I+ +V L L FI + L+EAS V G +IGGGS+
Sbjct: 132 VGELAKAIGTEGLVAGQVVDIS----NVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSD 187
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEA 282
E+IE+LRK+ +C+GL +QV DDILD D+ TYPKLMG+ ++ +A++L EA
Sbjct: 188 EEIERLRKFARCIGLLFQVVDDILDVTIA------DKLTYPKLMGLEKSREFAEKLNTEA 241
Query: 283 NQELAYFDPTRAAPLYHLADFLVSR 307
+L FD + APL LA+++ +R
Sbjct: 242 RDQLLGFDSDKVAPLLALANYIANR 266
>gi|15224197|ref|NP_179452.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77.1|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 171/294 (58%), Gaps = 56/294 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA +N+AL +AV L ++Y L G+RV LCIA+CELVGG E
Sbjct: 58 YMIGKANAVNEAL--DSAVSLREPIKIHEAIRYSLLAR--GKRVRPVLCIAACELVGGEE 113
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S +P ACA EM+ T++L AL+ +A E
Sbjct: 114 SVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFE 173
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLR 202
H+AT T VSP R+VRAIGE++ A+G++G++AG+++++ S G DV L L+FI +
Sbjct: 174 HLATSTA-VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHK 232
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD----- 257
L+EA+ V G ++GGGS+E++EKLR++ +C+GL +QV DDILD K +E G
Sbjct: 233 TAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 292
Query: 258 ---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKLMG+ +K +A +L+++A+++L FD +R PL LA+++ R
Sbjct: 293 LIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQ 346
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 171/294 (58%), Gaps = 56/294 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA +N+AL +AV L ++Y L G+RV LCIA+CELVGG E
Sbjct: 58 YMIGKANAVNEAL--DSAVSLREPIKIHEAIRYSLLAR--GKRVRPVLCIAACELVGGEE 113
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S +P ACA EM+ T++L AL+ +A E
Sbjct: 114 SVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFE 173
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLR 202
H+AT T VSP R+VRAIGE++ A+G++G++AG+++++ S G DV L L+FI +
Sbjct: 174 HLATSTA-VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHK 232
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD----- 257
L+EA+ V G ++GGGS+E++EKLR++ +C+GL +QV DDILD K +E G
Sbjct: 233 TAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 292
Query: 258 ---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKLMG+ +K +A +L+++A+++L FD +R PL LA+++ R
Sbjct: 293 LIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQ 346
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 169/293 (57%), Gaps = 49/293 (16%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAA------VPLILQYPTLPNHEGERVHGTLCIASCEL 112
P + YM K++ +N+AL + + + ++Y L G+RV LCIA+CE+
Sbjct: 21 PRFNFNLYMVEKSRSVNQALNDAVSLREPHKIHEAMRYSLLAG--GKRVRPVLCIAACEV 78
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGGNES+ M AC+ EM+ T++L ALL
Sbjct: 79 VGGNESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALL 138
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIK 199
+A EH+A T VSP+R++ AIGE++ ++GT G++AG++++INS+G D+ L +L+FI
Sbjct: 139 AFAFEHIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIH 198
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-- 257
+ L+E SVV G ++GGG E++EKLR + + +GL +QV DD+LD K KE G
Sbjct: 199 LHKTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVTKSSKELGKTA 258
Query: 258 ------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFL 304
D+ TYPKL+G+ + +A++L +A ++L+ FDP + APL LA+++
Sbjct: 259 GKDLVADKVTYPKLLGIEKSNEFAQKLNRDAQEQLSGFDPVKVAPLIALANYI 311
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 168/307 (54%), Gaps = 49/307 (15%)
Query: 49 TIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAA------VPLILQYPTLPNHEGERVH 102
T+K P YM K +N+AL A + ++Y L G+RV
Sbjct: 60 TVKEEEGEEKPTFNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAG--GKRVR 117
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------------- 135
LC+A+CELVGG+ES MP ACA EM+ T++L
Sbjct: 118 PVLCLAACELVGGHESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEE 177
Query: 136 -----NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KD 189
ALL +A EH+A T VS R+VR+IGE++ ++G+ G++AG++++I S+G D
Sbjct: 178 VAVLAGDALLAFAFEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSD 237
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L +L+FI + L+EASVV G ++GGGS+ +IEKLR + + +GL +QV DDILD
Sbjct: 238 VGLEQLEFIHVHKTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVT 297
Query: 250 KKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K +E G D+ TYPKLMG+ ++ +A +L +A L+ FDP +AAPL LA
Sbjct: 298 KSSQELGKTAGKDLVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALA 357
Query: 302 DFLVSRH 308
+++ R
Sbjct: 358 NYIAHRQ 364
>gi|374639385|gb|AEZ55681.1| geranyl diphosphate synthase large subunit [Salvia miltiorrhiza]
Length = 344
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 49/305 (16%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKAL------FEGAAVPLILQYPTLPNHEGERVHGT 104
K + N + YM KA +NKAL E + ++Y L G+RV
Sbjct: 41 KEDKNPTWAAFDFKRYMVEKADSVNKALEAVVQMKEPLKIHESMRYSLLAG--GKRVRPM 98
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
LCIA+CELVGG ES+ MP ACA EM+ T++L
Sbjct: 99 LCIAACELVGGEESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVA 158
Query: 136 ---NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVS 191
ALL A EH+A T+ +P+R++RA+G+++ ++G G++AG++++I S+G +V
Sbjct: 159 VLAGDALLSLAFEHVAVATRGSAPERILRALGQLAKSIGAEGLVAGQVVDICSEGMAEVG 218
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK 251
L L+FI + L++ SVV G ++GG EE++E+LRK+ KC+GL +QV DDILD K
Sbjct: 219 LDHLEFIHLHKTAALLQGSVVMGAILGGAKEEEVERLRKFAKCIGLMFQVVDDILDVTKS 278
Query: 252 KKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
E G D+ TYPKL+GV +K +A +L EA ++L +FD +AAPL +A++
Sbjct: 279 SHELGKTAGKDLVADKTTYPKLLGVQKSKEFADDLNREAQEQLLHFDSHKAAPLIAIANY 338
Query: 304 LVSRH 308
+ R+
Sbjct: 339 IAYRN 343
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 171/296 (57%), Gaps = 57/296 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ KA+ +NKAL +AVPL ++Y L G+RV LCIA+CELVGG E
Sbjct: 79 YIITKAELVNKAL--DSAVPLREPLKIHEAMRYSLLAG--GKRVRPVLCIAACELVGGEE 134
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S+ MP ACA EM+ T++L ALL +A E
Sbjct: 135 STAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFE 194
Query: 146 HMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKR 200
H+A+ T + VSP R+VRA+GE++ A+GT G++AG++++I+S+G DV L L+FI
Sbjct: 195 HLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL 254
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--- 257
+ L+EAS V ++GGGS+++IE+LRK+ +C+GL +QV DDIL K KE G
Sbjct: 255 HKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDILYVTKSSKELGKTAG 314
Query: 258 -----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPK+MG+ ++ +A++L EA +L FD + APL LA+++ R
Sbjct: 315 KDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQ 370
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 171/309 (55%), Gaps = 56/309 (18%)
Query: 50 IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHG 103
I SN N F + D YM KA+ +NKAL E V PL ++Y L G+RV
Sbjct: 71 IVSNANFTF---EFDPYMISKAESVNKALDEAIPVGEPLKIHEAMRYAILAA--GKRVRP 125
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLALNR-------------------------- 137
LC+ASCELVGG E++ MP ACA EM+ T++L +
Sbjct: 126 ILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGV 185
Query: 138 ------ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-- 189
ALL A EHM T +S +R+V A+ E++ ++GTRG++AG+ M+I+S+G D
Sbjct: 186 AILSGGALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLN 243
Query: 190 -VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
V L L+FI + L+E + V G +IGGGS+E+IE +RK+ +C+GL +QV DDILD
Sbjct: 244 EVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDE 303
Query: 249 MKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K +E AG D+ TYPKLMG+ +K + K L +A Q L F + APL L
Sbjct: 304 TKSSEELGKTAGKDQLTGKLTYPKLMGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVAL 363
Query: 301 ADFLVSRHK 309
F+ +R+K
Sbjct: 364 TTFIANRNK 372
>gi|426322797|gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 53/306 (17%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVH 102
K N P YM KA +NKAL + ++PL ++Y L G+R+
Sbjct: 51 KDQNFETSPTFDFKSYMLEKANSVNKALDD--SIPLTEPLKIHESMRYSLLAG--GKRIR 106
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------------- 135
LCIA+CELVGG ES+ MP ACA EM+ T++L
Sbjct: 107 PLLCIAACELVGGEESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKIFSED 166
Query: 136 -----NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KD 189
A+L + EH+AT TK V +R++R I E++ +G G++AG++++I+S+G
Sbjct: 167 VAVLAGDAMLALSFEHVATSTKGVPSERIIRVIYELAKCIGCEGLVAGQVVDISSEGMTQ 226
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L L+FI + L+E SVV G L+GGGS+E++EKLRK+ +C+GL +QV DDILD
Sbjct: 227 VGLEHLEFIHSNKTAALLEGSVVLGALLGGGSDEEVEKLRKFARCIGLLFQVVDDILDVT 286
Query: 250 KKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K KE G D+ TYPKL+G+ ++ +A+ L EA +L F +AAPL LA
Sbjct: 287 KSSKELGKTAGKDLVADKTTYPKLIGIEKSREFAERLNREAQDQLLGFHHNKAAPLIALA 346
Query: 302 DFLVSR 307
+++ R
Sbjct: 347 NYIAYR 352
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 173/320 (54%), Gaps = 57/320 (17%)
Query: 39 SSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVP--------LILQY 90
S +L Q +L+ + N E D+YM KA +N+AL +P ++Y
Sbjct: 73 SKALVQLADLSEQVKN---VVEFDFDKYMHSKAIAVNEAL--DKVIPPRYPQKIYESMRY 127
Query: 91 PTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------- 135
L G+RV LCIA+CEL+GG E MP ACA EM+ T++L
Sbjct: 128 SLLAG--GKRVRPILCIAACELMGGTEELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRR 185
Query: 136 -----------------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLA 177
ALL A EH+A T + + D ++R + EI A G+ GV+
Sbjct: 186 GKPTNHKVFGEDTAIIAGDALLSLAFEHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMG 245
Query: 178 GRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVG 236
G++++I S+G + L L+++ + L+E SVVCG ++GG SE+DIE+ R+Y +CVG
Sbjct: 246 GQVVDIESEGDPSIDLETLEWVHIHKTAVLLECSVVCGAIMGGASEDDIERARRYARCVG 305
Query: 237 LAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAY 288
L +QV DDILD + +E G D+ATYPKLMG+ AK +A EL+ QEL+
Sbjct: 306 LLFQVVDDILDVSQSSEELGKTAGKDLISDKATYPKLMGLEKAKEFADELLNRGKQELSC 365
Query: 289 FDPTRAAPLYHLADFLVSRH 308
FDPT+AAPL+ LAD++ SR
Sbjct: 366 FDPTKAAPLFALADYIASRQ 385
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 171/307 (55%), Gaps = 51/307 (16%)
Query: 49 TIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVH 102
T+K N + Q YM A +N+AL ++ PL ++Y L G+RV
Sbjct: 66 TMKGEEENSGFDFQ--SYMDQMADSVNQALESAVSLREPLKIHEAMRYSLLAG--GKRVR 121
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------------- 135
LCIA+CELVGG+ S MP ACA EM+ T++L
Sbjct: 122 PLLCIAACELVGGDVSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGED 181
Query: 136 -----NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KD 189
ALL +A EH+A T SPD++VRA+GE++ AVG G++AG++++I S+G D
Sbjct: 182 IAVLAGDALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLND 241
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L L++I + L+EA+VV G ++GGG++E++E+LRK+ C+GL +QV DDILD
Sbjct: 242 VGLDHLEYIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVT 301
Query: 250 KKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K E G D+ TYPKLMG+ ++ +A++L +A ++L FD +AAPL LA
Sbjct: 302 KSSVELGKTAGKDLVADKVTYPKLMGLEKSREFAEKLRDDAVEQLRVFDQVKAAPLIALA 361
Query: 302 DFLVSRH 308
++ R
Sbjct: 362 HYIAYRQ 368
>gi|350537639|ref|NP_001234302.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 166/296 (56%), Gaps = 49/296 (16%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCIASCELV 113
E Y+ KA +NKAL E V P I ++Y L G+RV LC+A+CELV
Sbjct: 69 EFNFKVYVAEKAICVNKALDEAIMVKDPPKIHEAMRYSLLAG--GKRVRPMLCLAACELV 126
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GGN+ + M ACA EM+ T++L ALL
Sbjct: 127 GGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLA 186
Query: 142 YAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKR 200
+A E++AT T V P R++ A+ E++ +VGT G++AG++ ++ G +V L L+FI
Sbjct: 187 FAFEYLATATTGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHI 246
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--- 257
+ L+EASVV G ++GGG++E+++KLR++ +C+GL +QV DDILD K E G
Sbjct: 247 HKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELGKTAG 306
Query: 258 -----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ AK +A EL EA Q+LA FD +AAPL LAD++ +R
Sbjct: 307 KDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQ 362
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 171/309 (55%), Gaps = 56/309 (18%)
Query: 50 IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHG 103
I SN N F + D YM KA+ +NKAL E V PL ++Y L G+RV
Sbjct: 72 IVSNANFTF---EFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILA--AGKRVRP 126
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLALNR-------------------------- 137
LC+ASCELVGG E++ MP ACA EM+ T++L +
Sbjct: 127 ILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGV 186
Query: 138 ------ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-- 189
ALL A EHM T +S +R+V A+ E++ ++GTRG++AG+ M+I+S+G D
Sbjct: 187 AILSGGALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLN 244
Query: 190 -VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
V L L+FI + L+E + V G +IGGGS+E+IE +RK+ +C+GL +QV DDILD
Sbjct: 245 EVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDE 304
Query: 249 MKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K +E AG D+ TYPKL+G+ +K + K L +A Q L F + APL L
Sbjct: 305 TKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVAL 364
Query: 301 ADFLVSRHK 309
F+ +R+K
Sbjct: 365 TTFIANRNK 373
>gi|15224064|ref|NP_179960.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
gi|75218930|sp|O04046.2|GGPP2_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 2; Short=GGPP synthase 2; Short=GGPS2;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2;
AltName: Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 171/309 (55%), Gaps = 56/309 (18%)
Query: 50 IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHG 103
I SN N F + D YM KA+ +NKAL E V PL ++Y L G+RV
Sbjct: 75 IVSNANFTF---EFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAA--GKRVRP 129
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLALNR-------------------------- 137
LC+ASCELVGG E++ MP ACA EM+ T++L +
Sbjct: 130 ILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGV 189
Query: 138 ------ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-- 189
ALL A EHM T +S +R+V A+ E++ ++GTRG++AG+ M+I+S+G D
Sbjct: 190 AILSGGALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLN 247
Query: 190 -VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
V L L+FI + L+E + V G +IGGGS+E+IE +RK+ +C+GL +QV DDILD
Sbjct: 248 EVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDE 307
Query: 249 MKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K +E AG D+ TYPKL+G+ +K + K L +A Q L F + APL L
Sbjct: 308 TKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVAL 367
Query: 301 ADFLVSRHK 309
F+ +R+K
Sbjct: 368 TTFIANRNK 376
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 187/365 (51%), Gaps = 64/365 (17%)
Query: 6 MTSSMNTPLH-------HHSKTPLGKPKVA------PNPKASHVPKSSSLDQAENLTIKS 52
M + ++PLH H + TP P P S P S + +
Sbjct: 1 MATITSSPLHFFSWSYNHGTLTPRSIPSTCFIFHNKPVSPKSTKPLSFKTPISSVYLTNT 60
Query: 53 NNNNPFPEIQID--EYMTLKAKKINKAL------FEGAAVPLILQYPTLPNHEGERVHGT 104
N E+ D Y+ K K +N+AL E + ++Y L G+RV
Sbjct: 61 ENKGKDKEMTFDFKAYLLEKGKSVNQALDNAILIREPEKIHEAMRYSLLAG--GKRVRPI 118
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
LCIA+ ELVGGNES MP ACA EM+ T++L
Sbjct: 119 LCIAASELVGGNESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVA 178
Query: 136 ---NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVS 191
ALL +A E++A T VSP R+VRAIGE++ +G+ G++AG++++I S G ++
Sbjct: 179 VLAGDALLAFAFEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIG 238
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK 251
L L+FI + L+EASVV G ++GGG++E +E+LRK+ +C+GL +QV DDILD
Sbjct: 239 LDHLEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMS 298
Query: 252 KKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
+E G D+ATYPKL+G+ A+ +A++L EA ++L FDP AAPL LA++
Sbjct: 299 SEELGKTAGKDLVADKATYPKLLGLEKAREFAEKLKNEAIEQLDEFDPEEAAPLLALAEY 358
Query: 304 LVSRH 308
+ R
Sbjct: 359 IAHRQ 363
>gi|384252734|gb|EIE26210.1| Polyprenyl synthetase [Coccomyxa subellipsoidea C-169]
Length = 289
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 166/291 (57%), Gaps = 54/291 (18%)
Query: 67 MTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCELVGGNES 118
M +A +N+AL + +VPL QYP + N G+RV LC+A+CE VGGN +
Sbjct: 1 MKERATLVNEALDK--SVPL--QYPEIINESMRYSLLAGGKRVRPCLCLAACEAVGGNIA 56
Query: 119 SVMPLACAAEMLVTLAL--------------------------------NRALLCYAVEH 146
MP ACA EML T++L ALLC A E+
Sbjct: 57 QAMPTACAMEMLHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDVAILAGDALLCLAFEY 116
Query: 147 MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG--KDVSLSELDFIKRLRCG 204
+ +T+ V+P+R+VR + E+ A G G++AG+I++I S+G + V L L +I +
Sbjct: 117 ICRETRGVAPERIVRVVCEVGKATGAEGLVAGQIVDIKSEGMAEQVGLETLQYIHEHKTA 176
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAG---- 256
L+EASVVCG L+GG E D+E+LRKY +C+GLA+QV DDILD + K AG
Sbjct: 177 ALLEASVVCGALVGGAGEPDVERLRKYARCIGLAFQVVDDILDITQSSEVLGKTAGKDLL 236
Query: 257 DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYP L+G+ +K A++L+A+A ++L+ +DP + APL LA ++ +R
Sbjct: 237 SDKTTYPSLLGIERSKEVAQQLIADAKEQLSCYDPAKVAPLLGLATYIGAR 287
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 166/296 (56%), Gaps = 49/296 (16%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCIASCELV 113
E Y+ KA +N+AL E V P+I ++Y L G+RV LC A+CELV
Sbjct: 69 EFDFKVYVAEKAICVNRALDEAIMVKDPPMIHEAMRYSLLAG--GKRVRPMLCFAACELV 126
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GGN+ + M ACA EM+ T++L ALL
Sbjct: 127 GGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLA 186
Query: 142 YAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKR 200
+A E++AT T V P R++ A+ E++ +VGT G++AG++ ++ G +V L L+FI
Sbjct: 187 FAFEYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHI 246
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--- 257
+ L+EASVV G ++GGG++E+++KLR++ +C+GL +QV DDILD K E G
Sbjct: 247 HKTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELGKTAG 306
Query: 258 -----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ AK +A EL EA Q+LA FD +AAPL LAD++ +R
Sbjct: 307 KDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQ 362
>gi|194272413|gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 172/296 (58%), Gaps = 51/296 (17%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAV---PL----ILQYPTLPNHEGERVHGTLCIASCEL 112
++ Y+ KA+ +NKAL E A + PL ++Y L G+R+ LCIA+CE+
Sbjct: 69 KLDFKAYVLGKAESVNKAL-EAAVLLKEPLRVHESMRYSLLAG--GKRIRPMLCIAACEM 125
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG+E++ MP ACA EM+ T++L ALL
Sbjct: 126 VGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAVLAGDALL 185
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIK 199
+A EH+AT TK VS +++VR IGE++ +G G++AG++++I S+G DV L L+FI
Sbjct: 186 SFAFEHIATATKGVSSEKIVRVIGELAKCIGAEGLVAGQVVDICSEGISDVGLEHLEFIH 245
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-- 257
+ L+EASVV G ++GGG+EE++ KLRK+ + +GL +QV DDILD K E G
Sbjct: 246 LHKTAALLEASVVLGAVLGGGTEEEVAKLRKFARNIGLLFQVVDDILDVTKSSHELGKTA 305
Query: 258 ------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYPKL+G+ ++ +A++L EA +L+ FD +AAPL LA+++ R
Sbjct: 306 GKDLVADKVTYPKLLGLQKSREFAEQLNKEAQAQLSGFDQGKAAPLIALANYIAYR 361
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 53/292 (18%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA +N+AL AAV L ++Y L G+RV LCIA+CELVGG E
Sbjct: 85 YMLQKANSVNQAL--DAAVSLKDPRKIHEAMRYSLLAG--GKRVRPMLCIAACELVGGTE 140
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S MP AC+ EM+ T++L ALL ++ E
Sbjct: 141 SIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFE 200
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCG 204
H+A T+ V P R++RAIGE++ ++G G++AG++++I S+G DV L L+FI +
Sbjct: 201 HIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTA 260
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD------- 257
L+E +VV G ++GGGS E++EKLR + + +GL +QV DDILD K +E G
Sbjct: 261 ALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLV 320
Query: 258 -DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKLMGV ++ +A++L +A +LA FD +AAPL LA+++ R
Sbjct: 321 ADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALANYIAHRQ 372
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 171/309 (55%), Gaps = 56/309 (18%)
Query: 50 IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHG 103
I SN N F + D YM KA+ +NKAL E V PL ++Y L G+RV
Sbjct: 77 IVSNANFTF---EFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILA--AGKRVRP 131
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLALNR-------------------------- 137
LC+ASCELVGG E++ +P ACA EM+ T++L +
Sbjct: 132 ILCLASCELVGGQENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGV 191
Query: 138 ------ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-- 189
ALL A EHM T +S +R+V A+ E++ ++GTRG++AG+ M+I+S+G D
Sbjct: 192 AILSGGALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLN 249
Query: 190 -VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
V L L+FI + L+E + V G +IGGGS+E+IE +RK+ +C+GL +QV DDILD
Sbjct: 250 EVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDE 309
Query: 249 MKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K +E AG D+ TYPKL+G+ +K + K L +A Q L F + APL L
Sbjct: 310 TKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVAL 369
Query: 301 ADFLVSRHK 309
F+ +R+K
Sbjct: 370 TTFIANRNK 378
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 161/299 (53%), Gaps = 54/299 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCE 111
E ++YM KA +N+AL A+PL ++Y L G+RV LCIA+CE
Sbjct: 86 EFDFNKYMDSKAMTVNEAL--NKAIPLRYPQKIYESMRYSLLAG--GKRVRPVLCIAACE 141
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
LVGG E +P ACA EM+ T++L AL
Sbjct: 142 LVGGTEELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTAGNAL 201
Query: 140 LCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDF 197
YA EH+A T K V DR++R + E+ A G+ GV+ G++++I S+G + L L++
Sbjct: 202 HSYAFEHIAVSTSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQTLEW 261
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + L+E SVVCG +IGG SE IE+ R+Y +CVGL +QV DDILD K E G
Sbjct: 262 IHIHKTAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVTKSSDELGK 321
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK ++ EL+ A EL+ FDP +AAPL LAD++ R
Sbjct: 322 TAGKDLISDKATYPKLMGLEKAKEFSDELLNRAKGELSCFDPVKAAPLLGLADYVAFRQ 380
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 176/331 (53%), Gaps = 55/331 (16%)
Query: 29 PNPKASHVPKSSSLDQAENLTIKSNNN--NPFPEIQIDEYMTLKAKKINKALFEGAAVPL 86
P P + P SS L + + +N + + E +D Y+ KAK +N AL + AVP+
Sbjct: 5 PYPIYTSAPVSSGLGAVLDQDLHTNPDAVSKSLEFDLDSYLRAKAKAVNVALDK--AVPM 62
Query: 87 ILQYPTLPNHE--------GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--- 135
QYP G+RV LCIA+CELVGGNE MP ACA EM+ T++L
Sbjct: 63 --QYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEDLAMPSACAMEMVHTMSLIHD 120
Query: 136 -----------------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEI 166
ALL YA EH+A T V DR++R I +
Sbjct: 121 DLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDALLAYAFEHIARATTGVPADRVLRVIAHL 180
Query: 167 SSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI 225
AVG+ G++AG+I++I S+G + V L L+++ + L+E++VV G ++GG SE++I
Sbjct: 181 GKAVGSEGLVAGQIVDIASEGDRTVGLEILEYVHTHKTAVLLESAVVSGAILGGASEDEI 240
Query: 226 EKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKE 277
+L Y + VGL +QV DDILD K E G D+ATYPKL+G+ ++ +A+E
Sbjct: 241 SRLSNYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLVADKATYPKLLGLEKSRAFAEE 300
Query: 278 LVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
L+ +A +L+ FD + APL LAD++ R
Sbjct: 301 LIRKAKDQLSVFDQQKVAPLLGLADYIAYRQ 331
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 162/278 (58%), Gaps = 57/278 (20%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ KA+ +NKAL +AVPL ++Y L G+RV LCIA+CELVGG E
Sbjct: 87 YIITKAESVNKAL--DSAVPLREPLKIHEAMRYSLLAG--GKRVRPVLCIAACELVGGEE 142
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S+ MP ACA EM+ T++L ALL +A E
Sbjct: 143 STAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFE 202
Query: 146 HMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKR 200
H+A+ T + VSP R+VRAIGE++ A+GT G++AG++++I+S+G DV L L+FI
Sbjct: 203 HLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL 262
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--- 257
+ L+EAS V G ++GGGS+++IE+LRK+ +C+GL +QV DDILD K KE G
Sbjct: 263 HKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAG 322
Query: 258 -----DEATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
D+ TYPK+MG+ ++ +A +L EA +L FD
Sbjct: 323 KDLIADKLTYPKIMGLEKSREFADKLNREARDQLLGFD 360
>gi|121145|sp|P80042.1|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 179/343 (52%), Gaps = 61/343 (17%)
Query: 19 KTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSN-------NNNPFPEIQIDEYMTLKA 71
K PL K+ NPK + S L + T K + PF Y+T KA
Sbjct: 32 KIPLKNSKI--NPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEPF---NFKIYVTEKA 86
Query: 72 KKINKALFEGAAV--PLI----LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLAC 125
+NKAL E V P + ++Y L G+RV LC+A+CELVGGN+ + M AC
Sbjct: 87 ISVNKALDEAIIVKEPHVIHEAMRYSLLAG--GKRVRPMLCLAACELVGGNQENAMAAAC 144
Query: 126 AAEMLVTLAL--------------------------------NRALLCYAVEHMATKTKN 153
A EM+ T++L +LL +A EH+ T
Sbjct: 145 AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAG 204
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVV 212
V+P R+V A+ E++ ++GT G++AG++ +I G VSL L+FI + L+E+SVV
Sbjct: 205 VTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVV 264
Query: 213 CGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPK 264
G ++GGG+ ++EKLR++ +C+GL +QV DDILD K +E G D+ TYPK
Sbjct: 265 LGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPK 324
Query: 265 LMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L+G+ AK +A EL EA Q+L FD +AAPL LAD++ R
Sbjct: 325 LLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYR 367
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 178/339 (52%), Gaps = 62/339 (18%)
Query: 18 SKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKA 77
S+ PL K AP K V + AE + +K + F + YM +AK +NKA
Sbjct: 20 SRVPLAK--AAPGRK---VVAQVATATAEKVDVKQAGSFDF-----NTYMVDRAKLVNKA 69
Query: 78 LFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCELVGGNESSVMPLACAAEM 129
+ E AVPL +YP N G+RV LC+A+CELVGG+ + +P ACA EM
Sbjct: 70 MDE--AVPL--KYPETLNESMRYSLLAGGKRVRPALCLAACELVGGDIHAALPAACAMEM 125
Query: 130 LVTLAL--------------------------------NRALLCYAVEHMATKTKNVSPD 157
+ T++L ALL ++ EH+A TK V +
Sbjct: 126 VHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSFEHIARATKGVPAE 185
Query: 158 RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
R++R I E+ AVG G++AG++++I S+ K+V L L +I + L+EASVVCG ++
Sbjct: 186 RVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKTAALLEASVVCGAIL 245
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEA--------TYPKLMGVA 269
GG E IEKLRKY +GLA+QV DDILD ++ G A TYPKL+G+
Sbjct: 246 GGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTEQLGKTAAKDLAVNKTTYPKLLGLE 305
Query: 270 GAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+K+ A +L+ EA Q+L FD +AAPL LA F+ R
Sbjct: 306 KSKQVADDLIKEAIQQLDGFDAAKAAPLVALAKFIGYRQ 344
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 166/292 (56%), Gaps = 55/292 (18%)
Query: 67 MTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASCELVGGNE 117
M KA +NKAL ++L+YP + HE G+RV LCIA+CELVGG E
Sbjct: 1 MLGKADSVNKAL----EATVLLRYP-IKIHESMRYSILAGGKRVRPLLCIAACELVGGQE 55
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S+ MP ACA EM+ T++L +LL +A E
Sbjct: 56 STAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFE 115
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCG 204
+AT T V DR+VR IGE++ ++G+ G++AG++++I S+G DV L L+FI +
Sbjct: 116 LIATSTTGVPADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTA 175
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD------- 257
L+E SVV G ++GG ++ ++EKLRK+ +C+G +QV DDILD K +E G
Sbjct: 176 ALLEGSVVLGAILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGKTAGKDLV 235
Query: 258 -DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ ++ +A++L EA +LA FD +AAPL LA+++ R+
Sbjct: 236 ADKTTYPKLIGLEKSREFAEKLNREAQDQLAAFDIEKAAPLIALANYIAYRN 287
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 168/295 (56%), Gaps = 49/295 (16%)
Query: 61 IQIDEYMTLKAKKINKALFEGAA------VPLILQYPTLPNHEGERVHGTLCIASCELVG 114
+ +YM KA IN+AL + + + ++Y L G+RV LCIASCELVG
Sbjct: 92 FEFKKYMFSKANAINEALDKCVSLRHPEKIHEAMRYSLLAG--GKRVRPILCIASCELVG 149
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
G+E SVMP ACA EM+ T++L ALL +
Sbjct: 150 GSEESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 209
Query: 143 AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRL 201
A EH+A TK V ++++R I E+ A+G+ G++AG++++++S G +V L L++I
Sbjct: 210 AFEHIACSTKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVH 269
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD---- 257
+ L+E SVV G +IGGGS+E+IE+LR++ +C+GL +QV DDILD K +E G
Sbjct: 270 KTAALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQELGKTACK 329
Query: 258 ----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ ++ +A+EL +A +++ FD +A PL LAD++ R
Sbjct: 330 DLVADKLTYPKLLGLEKSREFAQELNKQAMDQISVFDVEKAKPLICLADYIAHRQ 384
>gi|376372994|gb|AFB35651.1| chloroplast geranylgeranyl diphosphate synthase 3 [Nicotiana
tabacum]
Length = 363
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 175/330 (53%), Gaps = 71/330 (21%)
Query: 47 NLTIKSNNNNPFP----------------------EIQIDEYMTLKAKKINKALFEGAAV 84
NL IK NNP P ++ +EY+ KA +NKAL +
Sbjct: 34 NLKIKFYTNNPSPLSISALLTTKQQTDESKNKKKQAMEFNEYVLEKANSVNKALESSVLI 93
Query: 85 --PL----ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NR 137
P+ ++Y L G+R+ LCIASCELVGG+ES+ MP ACA EM+ T++L +
Sbjct: 94 KDPVKIHESMRYSLLAG--GKRIRPMLCIASCELVGGDESTAMPAACAVEMIHTMSLIHD 151
Query: 138 ALLCY-------------------------------AVEHMATKTKNVSPDRLVRAIGEI 166
L C A EH+AT+TK V R+VR IGE+
Sbjct: 152 DLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATQTKGVPSHRIVRVIGEL 211
Query: 167 SSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI 225
+ +G ++AG++++I S+G DV L L+FI + L+E SVV G ++GG E++
Sbjct: 212 AKCIGAERLVAGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVVLGAILGGADAEEV 271
Query: 226 EKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKE 277
EKLRK+ +C+GL +QV DDILD K ++ G D+ TYPKL+G+ ++ +A+E
Sbjct: 272 EKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLVADKVTYPKLIGIDKSRDFAEE 331
Query: 278 LVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L EA +LA FD +AAPL LA+++ R
Sbjct: 332 LNKEAQAQLAGFDQEKAAPLIALANYIAYR 361
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 166/300 (55%), Gaps = 56/300 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASC 110
E EY+ KA +N+AL AVPL +YP HE G+RV LCI++C
Sbjct: 88 EFDFKEYLRSKAMAVNEAL--DRAVPL--RYPERI-HEAMRYSLLAGGKRVRPVLCISAC 142
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG E MP ACA EM+ T++L A
Sbjct: 143 ELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILAGDA 202
Query: 139 LLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
LL +A EH+A T K+V DR++R + E+ +G++G++ G++ +I S+G V L L+
Sbjct: 203 LLSFAFEHIAVSTSKSVGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLDTLE 262
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+I + L+E SV+CG +I G S+ +IE++++Y + VGL +QV DDILD K KE G
Sbjct: 263 WIHIHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVTKSSKELG 322
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK++A +L+ A ++L+ FDP +AAPL LAD++ R
Sbjct: 323 KTAGKDLISDKATYPKLMGLEKAKQFASDLLIRAKEDLSCFDPMKAAPLLGLADYIAFRQ 382
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 170/321 (52%), Gaps = 59/321 (18%)
Query: 39 SSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE- 97
SS++ Q NL + F EY+ KA +N+AL L+YP HE
Sbjct: 69 SSTIAQLANLREEVKEVIKF---DFKEYLLSKAMAVNEALDRAVQ----LRYPE-KIHEA 120
Query: 98 --------GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------- 135
G+RV LCIA+CELVGG E MP ACA EM+ T++L
Sbjct: 121 MRYSLLAGGKRVRPVLCIAACELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 180
Query: 136 ------------------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVL 176
ALL +A EH+A T K+V DR++R + E+ +G++G++
Sbjct: 181 RGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKSVGSDRILRVVSELGRTIGSQGLV 240
Query: 177 AGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCV 235
G++ +I S+G V L L++I + L+E SVVCG +I G SE +IE++++Y + V
Sbjct: 241 GGQVADITSEGNASVDLDTLEWIHIHKTAVLLECSVVCGAIISGASENEIERVKRYARSV 300
Query: 236 GLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
GL +QV DDILD K KE G D+ATYPKLMG+ AK++A EL+ A + L+
Sbjct: 301 GLLFQVVDDILDVTKSSKELGKTAGKDLISDKATYPKLMGLEKAKQFAVELLDRAKENLS 360
Query: 288 YFDPTRAAPLYHLADFLVSRH 308
FDP +AAPL LAD++ R
Sbjct: 361 CFDPMKAAPLLGLADYIAFRQ 381
>gi|357483275|ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 371
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 166/301 (55%), Gaps = 53/301 (17%)
Query: 57 PFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIA 108
P + YM KA +NKAL E ++LQ P G+RV LCIA
Sbjct: 74 PNFNFNFNGYMLEKANIVNKALDEA----IVLQEPEKIYEAMRYSLLAGGKRVRPVLCIA 129
Query: 109 SCELVGGNESSVMPLACAAEMLVTLAL--------------------------------N 136
+C LVGG E + +P ACA EM+ T++L
Sbjct: 130 ACGLVGGKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAG 189
Query: 137 RALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSEL 195
ALL +A EH+A T V P+R+VRAI E++ AVG G++AG+I+++ S+GK +V L L
Sbjct: 190 DALLSFAFEHVAVSTIGVPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLETL 249
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
+FI + L+EA+VV G ++GGG+E++IEKLRK+ + +GL +QV DDILD K +E
Sbjct: 250 EFIHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKSSEEL 309
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D+ATYPKL+G+ +K +A +L+ +A+ L FD +AAPL L +++ R
Sbjct: 310 GKTAGKDLTADKATYPKLLGLEKSKEFADKLIKDAHDCLIGFDVEKAAPLVALTNYIAYR 369
Query: 308 H 308
Sbjct: 370 Q 370
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 164/284 (57%), Gaps = 49/284 (17%)
Query: 54 NNNPFPEIQIDEYMTLKAKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCI 107
P P + YM K ++KAL E + P I ++Y L G+RV LCI
Sbjct: 55 QQKPKPTFNFNAYMLGKGNSVHKALDESIMIKNPPTIHEAMRYSLLAG--GKRVRPILCI 112
Query: 108 ASCELVGGNESSVMPLACAAEMLVTLAL-------------------------------- 135
A+CELVGG E++ MP ACA EM+ T++L
Sbjct: 113 AACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLA 172
Query: 136 NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSE 194
+LL +A E+++++T+ SP R++ AIGE++ ++GT G++AG++++I S G +D+ L +
Sbjct: 173 GDSLLAFAFEYVSSRTEGASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQ 232
Query: 195 LDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE 254
L+FI + L+EASVV G ++GGGS+ +EKLR + +C+GL +QV DDILD K +E
Sbjct: 233 LEFIHIHKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEE 292
Query: 255 AGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
G D+ TYPKL+G+ ++++A+EL+AEA Q+L F+
Sbjct: 293 LGKTAGKDLLVDKTTYPKLLGLDKSRQFAEELLAEAKQQLEEFE 336
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 165/300 (55%), Gaps = 56/300 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASC 110
E +EYM KA ++ AL A+PL +YP HE G+RV LCIA+C
Sbjct: 98 EFDFNEYMKSKAVAVDAAL--DKAIPL--EYPE-KIHESMRYSLLAGGKRVRPALCIAAC 152
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG++ MP ACA EM+ T++L A
Sbjct: 153 ELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDA 212
Query: 139 LLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
LL +A EH+A T K V DR +R I E+ +G++G++ G++++I S+G +V L L+
Sbjct: 213 LLSFAFEHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLE 272
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+I + L+E SVV G ++GG +E++I ++R+Y +CVGL +QV DDILD K +E G
Sbjct: 273 WIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELG 332
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK +A EL A +EL+ FD +AAPL LAD++ R
Sbjct: 333 KTAGKDLLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYIAFRQ 392
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 160/291 (54%), Gaps = 53/291 (18%)
Query: 67 MTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCELVGGNES 118
M KA+ +N AL + AVP+ QYP G+RV LCIA+CELVGGNE
Sbjct: 1 MKSKAQAVNVALDK--AVPM--QYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEE 56
Query: 119 SVMPLACAAEMLVTLAL--------------------------------NRALLCYAVEH 146
MP ACA EM+ T++L ALL YA EH
Sbjct: 57 MSMPAACAMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEH 116
Query: 147 MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGK 205
+A T V DR++R I + AVG+ G++AG+I++I S+G V L L+++ +
Sbjct: 117 IARDTTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAV 176
Query: 206 LIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-------- 257
L+E+SVVCG ++GG SE++I +L KY + VGL +QV DDILD K E G
Sbjct: 177 LLESSVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLA 236
Query: 258 DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKL+G+ +K +A+EL +A +L+ FD +AAPL LAD++ R
Sbjct: 237 DKATYPKLLGLEKSKAFAEELTRKAKDQLSVFDQQKAAPLLGLADYIAYRQ 287
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 162/287 (56%), Gaps = 54/287 (18%)
Query: 66 YMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ KA +NKAL +AVPL +Y L G+RV LCIA+CELVGG E
Sbjct: 16 YIIRKADSVNKAL--DSAVPLREPLKIHEAXRYSLLAG--GKRVRPVLCIAACELVGGEE 71
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S P ACA E + T +L ALL +A E
Sbjct: 72 SLAXPAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFE 131
Query: 146 HMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD---VSLSELDFIKRL 201
H+A+ T + VSP R+VRA+GE++ A+GT G++AG++++I+S+G D V L L FI
Sbjct: 132 HLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLH 191
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEAT 261
+ L+EAS V G +IGGGS+E+IE+LRK+ +C+GL +QV DDILD K K T
Sbjct: 192 KTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSK------LT 245
Query: 262 YPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
YPKL G+ ++ +A++L EA +L FD + APL LA+++ +R
Sbjct: 246 YPKLXGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQ 292
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 163/296 (55%), Gaps = 52/296 (17%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
++YM +AK +NKAL E AVP ++Y L G+RV LC+A+CEL
Sbjct: 20 FDFNQYMVDRAKLVNKALDE--AVPQKYPDTLYESMRYSLLAG--GKRVRPALCLAACEL 75
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
+GG+ + +P ACA EM+ T++L ALL
Sbjct: 76 IGGDVQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALL 135
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKR 200
YA EH+A TK VS +R++R I E+ A G G++AG++++I S+ K+V L L +I
Sbjct: 136 TYAFEHIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHL 195
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEA 260
+ L+EASVVCG ++GG E IEKLRKY + +GLA+QV DDILD + ++ G A
Sbjct: 196 HKTAALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAA 255
Query: 261 --------TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
TYPKL+G+ ++ A++L+ EA Q+L FD +AAPL LA ++ R
Sbjct: 256 KDLAVNKTTYPKLLGLEKSREVAEQLINEAIQQLDGFDKVKAAPLVALAKYIGYRQ 311
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 168/294 (57%), Gaps = 49/294 (16%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAV--PL----ILQYPTLPNHEGERVHGTLCIASCELVG 114
+YM KA +NKAL ++ PL ++Y L G+RV LC+A+CELVG
Sbjct: 58 FDFKKYMLEKASSVNKALESAVSLKEPLKIHESMRYSLLAG--GKRVRPMLCLAACELVG 115
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
G+ S+ MP AC+ EM+ T++L ALL Y
Sbjct: 116 GHPSTAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAGDALLAY 175
Query: 143 AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRL 201
+ E++AT T+ V P+R+VR I E++ + + G+LAG++++I S+G ++ L L++I
Sbjct: 176 SFEYLATATEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHLEYIHLH 235
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD---- 257
+ L+E SVV G ++GGG++E++E+LRK+ +C+GL +QV DDILD K E G
Sbjct: 236 KTAALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVTKTSVELGKTAGK 295
Query: 258 ----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYPKL+G+ ++ +A++L EA ++L FD +AAPL LA+++ R
Sbjct: 296 DLVADKTTYPKLIGIEKSREFAEKLNREAQEQLVGFDSDKAAPLIALANYIAYR 349
>gi|380039815|gb|AFD32422.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 393
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 165/300 (55%), Gaps = 56/300 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASC 110
E +E+M KA ++ AL A+PL +YP HE G+RV LCIA+C
Sbjct: 98 EFDFNEHMKSKAVAVDAAL--DKAIPL--EYPE-KIHEPMRYSLLAGGKRVRPALCIAAC 152
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG++ MP ACA EM+ T++L A
Sbjct: 153 ELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDA 212
Query: 139 LLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
LL +A EH+A T K V DR +R I E+ +G++G++ G++++I S+G +V L L+
Sbjct: 213 LLSFAFEHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDIASEGDANVDLKTLE 272
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+I + L+E SVV G ++GG +E++I ++R+Y +CVGL +QV DDILD K +E G
Sbjct: 273 WIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELG 332
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK +A EL A +EL+ FD +AAPL LAD++ R
Sbjct: 333 KTAGKDLLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYIAFRQ 392
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 166/292 (56%), Gaps = 51/292 (17%)
Query: 66 YMTLKAKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCIASCELVGGNESS 119
Y+ KA K+N+AL + +V P+I ++Y L G+RV LCIA+CELVGG ES+
Sbjct: 77 YLIEKANKVNEALDQAVSVKNPPMIHEAMRYSLLAG--GKRVRPILCIAACELVGGEESN 134
Query: 120 VMPLACAAEMLVTLAL---------------------------------NRALLCYAVEH 146
+P ACA EM+ T++L +LL ++ E+
Sbjct: 135 SVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAGDSLLAFSFEY 194
Query: 147 MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME--INSKGKDVSLSELDFIKRLRCG 204
+AT TKNVSP + IS ++GT G++AG++ + IN + + L +L+FI +
Sbjct: 195 IATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQLEFIHIHKTA 254
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDD------ 258
L+EA+VV G ++GGG+ E++EKLR++ +C+GL +QV DDILD K +E G
Sbjct: 255 ALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKRSC 314
Query: 259 --EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ TYPKLMG+ GA+ +A +L +A +L+ FD +AAPL LAD++ R
Sbjct: 315 GGKTTYPKLMGLDGAREFADKLNKDAKNQLSEFDREKAAPLLALADYIAYRQ 366
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 173/308 (56%), Gaps = 49/308 (15%)
Query: 48 LTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAA------VPLILQYPTLPNHEGERV 101
L + +N + YM KA+++N+AL A + ++Y L G+RV
Sbjct: 53 LVKEDSNKFSLNNFDFEAYMKEKAERVNRALDAAVAQREPRWIHESMRYSLLAG--GKRV 110
Query: 102 HGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------ 142
LCIASCELVGG+E + MP ACA EM+ T++L + L C
Sbjct: 111 RPLLCIASCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGE 170
Query: 143 -------------AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-K 188
A EH+A T+ V+P+R+VRA+ E +G+ G++ G++++I+S+G
Sbjct: 171 NVAVLAGDALLALAFEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLA 230
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
+V + +L++I + L+EA+VV G ++GG +E +EKLRK+ +C+GL +QV DDILD
Sbjct: 231 EVGVEQLEYIHLHKTAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDV 290
Query: 249 MKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K +E G D+ TYPKL+G+ ++ +A++L A+A +L FDP RAAPL L
Sbjct: 291 TKSSEELGKTAGKDLLTDKTTYPKLLGLEKSREFAEKLRADACDQLVGFDPARAAPLIAL 350
Query: 301 ADFLVSRH 308
A+++ R+
Sbjct: 351 ANYIAYRN 358
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 61/326 (18%)
Query: 39 SSSLDQAENLTIKSNN-NNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI---------L 88
SS Q +L ++S+ E + YM K+K +N+ L E AVPL +
Sbjct: 35 SSRRRQTRHLNVQSHTLTAESYESEFMSYMIRKSKSVNEVLDE--AVPLCEPVLKIREAM 92
Query: 89 QYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML------------------ 130
+Y L G+RV LC+A+CELVGG ES+ MP ACA EM+
Sbjct: 93 RYTLLSG--GKRVRPMLCLAACELVGGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNL 150
Query: 131 ---------------VTLALNRALLCYAVEHMATKTK-NVSPDRLVRAIGEISSAVGTRG 174
LA++ AL+ A++H T +V P+R++ AI E++ AVGT G
Sbjct: 151 RRGKPTNHKVFGENIAILAVD-ALIALAIKHTVESTSLDVPPERVLLAILEMARAVGTEG 209
Query: 175 VLAGRIMEINSKGK----DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRK 230
++AG+ +++ +GK D L L+FI + L+EA+ V G ++GGGS+E+IE++R
Sbjct: 210 LVAGQAADLDGEGKSFDNDTGLKHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRS 269
Query: 231 YGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
Y +C+GL +QV DD+LD K +E G ++ TYPK+MGV ++ YA++L EA
Sbjct: 270 YARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLISEKLTYPKVMGVEKSREYAEKLNREA 329
Query: 283 NQELAYFDPTRAAPLYHLADFLVSRH 308
+ L FDP +AAPL LAD++V+R
Sbjct: 330 REHLNMFDPDKAAPLLLLADYIVNRQ 355
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 189/367 (51%), Gaps = 69/367 (18%)
Query: 6 MTSSMNTPLHHH------SKTPLGK---------PKVAPNPKASHVPKSS-SLDQAENLT 49
M S MN + H K+P K P + P + +P SS S+
Sbjct: 1 MASVMNLSITHFCSSHLKQKSPSNKLVFHGLNSNPFLKSKPPQNVIPYSSMSISSFHTTK 60
Query: 50 IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERV 101
I +++ P YM KA +NKAL A+V L ++Y L G+RV
Sbjct: 61 IAMDSSPKPPTFDFKSYMLEKAISVNKAL--DASVSLQEPVKIHESMRYSLLAG--GKRV 116
Query: 102 HGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------------- 135
L IA+CEL GG+E+ MP ACA EM+ T++L
Sbjct: 117 RPILSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGE 176
Query: 136 ------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK- 188
A+L A +AT+T VS ++VR I E++ A+G G++AG+I+++ S+G
Sbjct: 177 SVAVLAGDAMLALAFHLVATETSGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDP 236
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
++ L +L+FI R + L+E SVV G ++GG ++E++EK+RKY +C+GL +QV DDILD
Sbjct: 237 NLGLKDLEFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDV 296
Query: 249 MKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K KE G D+ TYPKL+G+ ++ ++ EL EA +LA F+ +AAPL +
Sbjct: 297 TKSSKELGKTAGKDLVADKTTYPKLIGIEKSREFSDELKREAVDQLAGFNSDKAAPLIAM 356
Query: 301 ADFLVSR 307
A+++ +R
Sbjct: 357 ANYIANR 363
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 163/300 (54%), Gaps = 56/300 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASC 110
E EY+ KA +N+AL AVPL +YP HE G+R+ L IA+C
Sbjct: 88 EFDFKEYLHSKAISVNEALER--AVPL--RYPE-KIHEAMRYSLLAGGKRIRPILTIAAC 142
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
ELVGG+E MP ACA EM+ T++L A
Sbjct: 143 ELVGGSEELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGDA 202
Query: 139 LLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
LL +A EH+A T K V+ R++R + E+ A+G++GV G++ +I S+G V L L+
Sbjct: 203 LLSFAFEHIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETLE 262
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+I + L+E +VV G +IGG SE +IE+ +Y +CVGL +QV DDILD + +E G
Sbjct: 263 WIHIHKTAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEELG 322
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKLMG+ AK +A EL+ A +EL+ F+P +AAPL LAD++ R
Sbjct: 323 KTAGKDLVSDKATYPKLMGLEKAKEFADELLDRAKEELSCFNPAKAAPLLGLADYIALRQ 382
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 180/336 (53%), Gaps = 64/336 (19%)
Query: 26 KVAPNPKASHV--PKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAA 83
K +P P+ + P S +L +N ++ + Y+ K +N AL E A
Sbjct: 2 KFSPPPRWRMLATPASRTLQDVKNSCTGESS------FDLQSYLQFKGVAVNAALDE--A 53
Query: 84 VPLILQYPTLPNHE---------GERVHGTLCIASCELV-GGNESSVMPLACAAEMLVTL 133
+P+ +YP HE G+RV LCIA+ E++ GG + + MP A A EM+ T+
Sbjct: 54 LPM--RYPD-KIHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQEAAMPSAIAMEMIHTM 110
Query: 134 AL--------------------------------NRALLCYAVEHMATKTKNVSPDRLVR 161
+L A+L A EH+A + V +R+VR
Sbjct: 111 SLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAFEHIARCSAGVPAERVVR 170
Query: 162 AIGEISSAVGTRGVLAGRIMEINSKGKD-VSLSELDFIKRLRCGKLIEASVVCGVLIGGG 220
+ E+ SAVG++G++AG+I++I +GK+ V L L +I + GKL+EA+ VCG + GG
Sbjct: 171 IVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRYIHIHKTGKLLEAAGVCGAIAGGA 230
Query: 221 SEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAK 272
SEE++ ++R Y + VGL +QV DDILD K +E G D+ TYPKL+G+ GA+
Sbjct: 231 SEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDLISDKTTYPKLLGLQGAR 290
Query: 273 RYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
YA+EL+AEA Q+LA F +RAAPL LAD++ R
Sbjct: 291 DYAEELLAEAKQQLAAFGESRAAPLLALADYIAYRQ 326
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 183/347 (52%), Gaps = 58/347 (16%)
Query: 15 HHHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQID--EYMTLKAK 72
H +K + P + K S P+ L + T++ N+ E D Y+ K
Sbjct: 24 HKFAKGMVAFPGSSRPMKFSPPPRWRMLATPASRTLQDVKNSSTGESSFDLQSYLQFKGV 83
Query: 73 KINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASCELV-GGNESSVMP 122
+N AL E A+P+ +YP HE G+RV LCIA+ E++ GG + + MP
Sbjct: 84 AVNAALDE--ALPM--RYPD-KIHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQEAAMP 138
Query: 123 LACAAEMLVTLAL--------------------------------NRALLCYAVEHMATK 150
A A EM+ T++L A+L A EH+A
Sbjct: 139 SAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAFEHIARC 198
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-VSLSELDFIKRLRCGKLIEA 209
+ V +R+VR + E+ SAVG++G++AG+I++I +GK+ V L L +I + GKL+EA
Sbjct: 199 SAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTLRYIHIHKTGKLLEA 258
Query: 210 SVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEAT 261
+ VCG + GG SEE++ ++R Y + VGL +QV DDILD K +E G D+ T
Sbjct: 259 AGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKDLISDKTT 318
Query: 262 YPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
YPKL+G+ GA+ YA+EL+A A Q+LA F +RAAPL LAD++ R
Sbjct: 319 YPKLLGLQGARDYAEELLAGAKQQLAAFGESRAAPLLALADYIAYRQ 365
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 166/294 (56%), Gaps = 57/294 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA+ IN+AL E A+PLI ++Y L G+RV LC+A+CELVGG E
Sbjct: 84 YMINKAETINRALDE--AIPLIEPLNIHKAMRYAILAG--GKRVRPILCLAACELVGGEE 139
Query: 118 SSVMPLACAAEMLVTLALNR--------------------------------ALLCYAVE 145
+ ACA EM+ T++L + ALL A E
Sbjct: 140 RLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFE 199
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLR 202
H+ +VS ++VR + E++ ++GT+G++AG+ M+++S+G DV L +L++I +
Sbjct: 200 HLTEA--DVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLEDLEYIHVHK 257
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD 258
G L+EAS V G +IGGGSEE+IEK+R + +C+GL +QV DDILD K +E AG D
Sbjct: 258 TGALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSEELGKTAGKD 317
Query: 259 EA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ TYPK+MG+ +K + K+L EA + + FD + PL L +F+ +R+
Sbjct: 318 QVAGKLTYPKVMGLEKSKEFVKKLKREAKEHIQGFDSDKVKPLIALTNFIANRN 371
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 179/328 (54%), Gaps = 55/328 (16%)
Query: 31 PKASHVPKSSSLDQAENLTIKSNNNNPFPE-IQIDEYMTLKAKKINKALFEGAAVPL--- 86
P + +P SS + T +++P P YM KA +NKAL A+V L
Sbjct: 41 PPQNVIPYSSLSISSVQTTKIVMDSSPTPSTFDFKSYMLEKAISVNKAL--DASVSLQEP 98
Query: 87 -----ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------ 135
++Y L G+RV L IA+CEL GG+E+ MP ACA EM+ T++L
Sbjct: 99 VKIHESMRYSLLAG--GKRVRPLLSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDLP 156
Query: 136 --------------------------NRALLCYAVEHM-ATKTKNVSPDRLVRAIGEISS 168
A+L A H+ AT+T+ VS D++VR I E++
Sbjct: 157 FMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAAFHLVATETRGVSSDQVVRVIVELAK 216
Query: 169 AVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEK 227
A+G G++AG+I+++ S+G ++ L +L+FI R + L+E SVV G ++GG ++E++EK
Sbjct: 217 AIGAEGLVAGQIVDVCSEGDPNLGLEDLEFIHRSKTAALLEGSVVMGAILGGANDEEVEK 276
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELV 279
+RKY +C+GL +QV DDILD K KE G D+ TYPKL+G+ ++ ++ EL
Sbjct: 277 VRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEKSREFSDELK 336
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
EA +LA F+ + APL +A+++ +R
Sbjct: 337 REAIDQLAGFNSDKTAPLIAMANYIANR 364
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 171/317 (53%), Gaps = 57/317 (17%)
Query: 43 DQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLP 94
D E L + N + YM KA+ IN+AL A+PLI ++Y
Sbjct: 92 DAREFLDSSTQIENKEDDFGFKPYMIRKAETINRAL--DKAIPLIEPLNIYKAMRYTIFA 149
Query: 95 NHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLALNR----------------- 137
G+RV LC+A+CELVGG E S +P AC+ EM+ T++L +
Sbjct: 150 G--GKRVRPILCLAACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPT 207
Query: 138 ---------------ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
ALL A EH+ +VS ++VR + E++ ++GT+G++AG+ M+
Sbjct: 208 THKVFGESVAILSGGALLALAFEHLTEA--DVSSKKMVRVVKELAKSIGTKGLVAGQAMD 265
Query: 183 INSKG---KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAY 239
++S+G D L +L++I + G L+EAS V G +IGGGSEE+IEK+R + +C+GL +
Sbjct: 266 LSSEGLDPNDFRLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLF 325
Query: 240 QVWDDILDNMKKKKE----AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD K +E AG D+ TYP+++G+ +K + K+L +A + L FD
Sbjct: 326 QVVDDILDETKSSEELGKTAGKDKVAGKLTYPRVIGLEKSKEFVKKLNRDAREHLQGFDE 385
Query: 292 TRAAPLYHLADFLVSRH 308
+ PL L +F+ +R+
Sbjct: 386 DKVKPLIALTNFIANRN 402
>gi|414887302|tpg|DAA63316.1| TPA: putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 441
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 164/306 (53%), Gaps = 62/306 (20%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASC 110
E YM +A +N+AL AA+P ++Y L G+RV LC+A+C
Sbjct: 138 EFNFKAYMEERAVAVNRAL--DAAIPAGGLPAALHDAMRYALLAG--GKRVRPALCLAAC 193
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
+VGG ES MP A A EM+ T++L A
Sbjct: 194 AVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDA 253
Query: 139 LLCYAVEHMATKTK-------NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG--KD 189
LL + HMA+ P R+VRAIGE++ +G+ G++AG+++++ G +
Sbjct: 254 LLSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQT 313
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L L++I + L+EASVV G +IGGG++E IE LRKY + +GL +QV DDILD
Sbjct: 314 VPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVT 373
Query: 250 KKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K +E G D+ TYPKL+G+A ++ +A++LV++A ++LA FD +AAPL HLA
Sbjct: 374 KSSEELGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLA 433
Query: 302 DFLVSR 307
+++ R
Sbjct: 434 NYIAHR 439
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 174/350 (49%), Gaps = 62/350 (17%)
Query: 16 HHSKTPLGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKIN 75
H S P AP+P +S + E YM +A +N
Sbjct: 14 HFSPLPFAAATGAPSPSSSVAIAAHYHHHGRRRFSAIVATATTTEFNFKAYMEERAVAVN 73
Query: 76 KALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACA 126
+AL AA+P ++Y L G+RV LC+A+C +VGG ES MP A A
Sbjct: 74 RAL--DAAIPAGGLPAALHDAMRYALLAG--GKRVRPALCLAACAVVGGPESWAMPAAAA 129
Query: 127 AEMLVTLAL--------------------------------NRALLCYAVEHMATKTK-- 152
EM+ T++L ALL + HMA+
Sbjct: 130 VEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYP 189
Query: 153 -----NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG--KDVSLSELDFIKRLRCGK 205
P R+VRAIGE++ +G+ G++AG+++++ G + V L L++I +
Sbjct: 190 PAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLELLEYIHLHKTAA 249
Query: 206 LIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------D 257
L+EASVV G +IGGG++E IE LRKY + +GL +QV DDILD K +E G
Sbjct: 250 LLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 309
Query: 258 DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ TYPKL+G+A ++ +A++LV++A ++LA FD +AAPL HLA+++ R
Sbjct: 310 DKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYIAHR 359
>gi|356572072|ref|XP_003554194.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 343
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 172/314 (54%), Gaps = 63/314 (20%)
Query: 53 NNNNPF---PEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERV 101
N+ PF P YM K +N+AL AAV L ++Y L G+R+
Sbjct: 34 NSTLPFSSAPNFDFKAYMLDKINTVNRAL--DAAVALREPRKLHEAMRYTLLAG--GKRI 89
Query: 102 HGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------ 142
LC+A+C LVGG+E++ +P ACA EM+ T++L + L C
Sbjct: 90 RPVLCLAACSLVGGSEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGE 149
Query: 143 -------------AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
A EH+A T+ R+VRAIGE++ +G GV+AG+++++NS+G
Sbjct: 150 HVAVLAGDALLALAFEHVAASTEGAYAARVVRAIGELAKCIGAEGVMAGQVVDVNSEGLT 209
Query: 190 VSLSE-------LDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+S+S+ L+FI + ++E +VV G ++GGGS+E+IE+LR +G+C+GL QV
Sbjct: 210 LSMSDEVAVLERLEFIHVHKTA-VVEGAVVMGAILGGGSDEEIERLRMFGRCIGLLGQVV 268
Query: 243 DDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DD+LD K +E G D+ TYPK++G+ +K +A +LV +AN+ LA F P +A
Sbjct: 269 DDVLDVTKSSEELGKTAKKDLVADKLTYPKVLGIHESKEFAHKLVHDANKMLAGFHPPKA 328
Query: 295 APLYHLADFLVSRH 308
APL+ L +++ R
Sbjct: 329 APLFALTNYIAYRQ 342
>gi|15224199|ref|NP_179454.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2.1|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 166/294 (56%), Gaps = 57/294 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA+ IN+AL E A+PLI ++Y L G+RV LC+A+CELVGG E
Sbjct: 84 YMISKAETINRALDE--AIPLIEPLNIHKAMRYAILAG--GKRVRPILCLAACELVGGEE 139
Query: 118 SSVMPLACAAEMLVTLALNR--------------------------------ALLCYAVE 145
+ ACA EM+ T++L + ALL A E
Sbjct: 140 RLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFE 199
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLR 202
H+ +VS ++VRA+ E++ ++GT+G++AG+ +++S+G DV L +L++I +
Sbjct: 200 HLTEA--DVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHK 257
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD 258
G L+EAS V G +IGGG+E++IEK+R + +C+GL +QV DDILD K +E AG D
Sbjct: 258 TGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKD 317
Query: 259 EA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ TYPK++GV +K + ++L +A + L FD + PL L +F+ +R+
Sbjct: 318 KVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRN 371
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 166/294 (56%), Gaps = 57/294 (19%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
YM KA+ IN+AL E A+PLI ++Y L G+RV LC+A+CELVGG E
Sbjct: 84 YMISKAETINRALDE--AIPLIEPLNIHKAMRYAILAG--GKRVRPILCLAACELVGGEE 139
Query: 118 SSVMPLACAAEMLVTLALNR--------------------------------ALLCYAVE 145
+ ACA EM+ T++L + ALL A E
Sbjct: 140 RLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFE 199
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLR 202
H+ +VS ++VRA+ E++ ++GT+G++AG+ +++S+G DV L +L++I +
Sbjct: 200 HLTEA--DVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHK 257
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD 258
G L+EAS V G +IGGG+E++IEK+R + +C+GL +QV DDILD K +E AG D
Sbjct: 258 TGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKD 317
Query: 259 EA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ TYPK++GV +K + ++L +A + L FD + PL L +F+ +R+
Sbjct: 318 KVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRN 371
>gi|405789932|gb|AFS28709.1| putative geranylgeranyl pyrophosphate synthase, partial [Olea
europaea]
Length = 251
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 141/240 (58%), Gaps = 43/240 (17%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+RV LCIA+CELVGG ES+ MP ACA EM+ T++L
Sbjct: 14 MRYSLLAG--GKRVRPMLCIAACELVGGEESTAMPSACAVEMIHTMSLMHDDLPFMDNDD 71
Query: 136 --------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
ALL YA EHMA TK V +R+VR IGE++ +G+ G+
Sbjct: 72 LRRGKPTNHKIFGEDVTVLAGDALLAYAFEHMAVATKGVPSERIVRVIGELAKCIGSEGL 131
Query: 176 LAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKC 234
+AG++++I S+G DV L L+FI + L+E SVV G ++GG +++++EKLRK+ +C
Sbjct: 132 VAGQVVDICSEGNSDVGLDHLEFIHIHKTAALLEGSVVLGAILGGANDQEVEKLRKFARC 191
Query: 235 VGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQEL 286
+GL +QV DDILD K +E G D+ TYPKL+G+ +K +A++L EA ++L
Sbjct: 192 IGLLFQVVDDILDVTKSSQELGKTAGKDLLADKTTYPKLIGIDKSKEFAEKLNREAQEQL 251
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 173/328 (52%), Gaps = 59/328 (17%)
Query: 32 KASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYP 91
+AS S+++ Q NL E ++YM KA + +AL A+P YP
Sbjct: 67 RASSSRSSNTIVQFANL---PEQGKKVVEFDFNKYMLSKAMAVTEAL--DKAIPH--SYP 119
Query: 92 TLPNHE---------GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------- 135
HE G+RV LCIA+CELVGG E MP ACA EM+ T++L
Sbjct: 120 Q-KIHESMRYSLLAGGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTMSLIHDDLPC 178
Query: 136 -------------------------NRALLCYAVEHM-ATKTKNVSPDRLVRAIGEISSA 169
AL +A EH+ A +K+V D ++RA+ E++ A
Sbjct: 179 MDNDDLRRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKSVGSDGILRAVTELARA 238
Query: 170 VGTRGVLAGRIMEINS-KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
G +G++ G+I++I S + V L L++I + L E + VCG +IGG S ++IE++
Sbjct: 239 TGPQGIMGGQIVDIASERDAFVDLQTLEWIHIHKTAVLFECATVCGAIIGGASGDEIERI 298
Query: 229 RKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVA 280
R++ + +GL +QV DDILD K ++ G D+ATYPKLMG+ AK ++ EL+
Sbjct: 299 RRFARYLGLLFQVVDDILDVTKSSEDLGKTAGKDLVSDKATYPKLMGLEKAKGFSLELLN 358
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSRH 308
+A +EL+ FDP +AAPL+ LAD++ R
Sbjct: 359 KAKEELSCFDPMKAAPLFGLADYMALRQ 386
>gi|15231877|ref|NP_188071.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1.1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 180/310 (58%), Gaps = 58/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVH 102
KSN+NN + ++ YM KA+ +N AL +VPL+ ++Y L G+RV
Sbjct: 56 KSNDNNSAFDFKL--YMIRKAESVNAAL--DVSVPLLKPLTIQEAVRYSLLAG--GKRVR 109
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIA+CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 110 PLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGED 169
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
A EHM + V+P++++RA+ E++ A+GT G++AG+++++ S+ +
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLN 229
Query: 190 ---VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
V L L+FI + L+EA+ V GV++GGG+E++IEKLRKY +C+GL +QV DDIL
Sbjct: 230 PDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDIL 289
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D K +E AG D + TYP+L+G+ G++ A++L EA ++L FDP++AAPL
Sbjct: 290 DVTKSTEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLV 349
Query: 299 HLADFLVSRH 308
LA ++ RH
Sbjct: 350 ALASYIACRH 359
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|414590653|tpg|DAA41224.1| TPA: hypothetical protein ZEAMMB73_231747 [Zea mays]
Length = 367
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 166/306 (54%), Gaps = 62/306 (20%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASC 110
E YM +A +N+AL AAVP ++Y L G+RV LC+A+C
Sbjct: 64 EFDFKAYMGERAVAVNRAL--DAAVPAGEPPAALHDAMRYALLAG--GKRVRPALCLAAC 119
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
+VGG E MP A A EM+ T++L A
Sbjct: 120 AVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDA 179
Query: 139 LLCYAVEHMATKTK---NVSPD----RLVRAIGEISSAVGTRGVLAGRIMEINSKG--KD 189
LL + HMA+ +V P+ R+VRAIGE++ +G+ G++AG+++++ G +
Sbjct: 180 LLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSET 239
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L L++I + L+EASVV G +IGGG++E IE+LRKY + +GL +QV DDILD
Sbjct: 240 VPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVT 299
Query: 250 KKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K +E G D+ TYPKL+G+ ++ +A+EL+++A ++LA FD +AAPL HLA
Sbjct: 300 KSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEELLSDAVEQLACFDKEKAAPLLHLA 359
Query: 302 DFLVSR 307
+++ R
Sbjct: 360 NYIAHR 365
>gi|334119738|ref|ZP_08493823.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
gi|333457900|gb|EGK86521.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
Length = 308
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 167/309 (54%), Gaps = 54/309 (17%)
Query: 48 LTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGE 99
L + ++ P + Y+ + + I AL +A+P+I ++Y L G+
Sbjct: 3 LATEMGSSQPESSFDLSTYLVKRKEAIEVAL--DSALPVIYPEKIYEAMRYSLLAG--GK 58
Query: 100 RVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------ 135
R+ LC+ASCEL GG S MP ACA EM+ T++L
Sbjct: 59 RLRPILCLASCELAGGTTSMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVY 118
Query: 136 --------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
LL YA E +ATKT+NV P ++++ I ++ A G G++ G+++++ S+G
Sbjct: 119 GEDIAILAGDGLLTYAFEFIATKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEG 178
Query: 188 K-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
K DVSL L++I + G L+EA VVCG ++ G S D+++L ++ + +GLA+Q+ DDIL
Sbjct: 179 KTDVSLETLNYIHAHKTGALLEACVVCGAILAGASAADLQRLSRFAQNIGLAFQIIDDIL 238
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D ++E AG D + TYP L G+ ++R A +LVA+A +LA F ++A PL
Sbjct: 239 DITATQEELGKTAGKDVQAGKVTYPSLWGIEESRRQASQLVADAKDQLAVFG-SKALPLL 297
Query: 299 HLADFLVSR 307
+ADF+ SR
Sbjct: 298 AIADFITSR 306
>gi|434386605|ref|YP_007097216.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
gi|428017595|gb|AFY93689.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
Length = 305
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 147/251 (58%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASCEL+GG+ SVMP+ACA EM+ T++L
Sbjct: 54 GKRLRPMLCLASCELIGGSLDSVMPMACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHK 113
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL Y+ E++AT+T+ VS DR+++AI ++ AVG G++ G+++++ S
Sbjct: 114 VYGEDIAILAGDGLLAYSFEYIATQTQGVSADRVLKAIAHLAKAVGANGLVGGQVVDLES 173
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S+ L +I + G L++A VVCG ++ G +E +EKL K+ +GLA+Q+ DD
Sbjct: 174 EGKPDISVETLTYIHNHKTGALLKACVVCGAILAGATEAQLEKLSKFAHNIGLAFQIIDD 233
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + E AG D +ATYPKL G+ +KR A +LVAEA LA F RA P
Sbjct: 234 ILDITATQAELGKTAGKDIQAQKATYPKLWGLEESKRQADKLVAEAKAILAEFGD-RARP 292
Query: 297 LYHLADFLVSR 307
L LAD++ R
Sbjct: 293 LQALADYITDR 303
>gi|359477279|ref|XP_002275812.2| PREDICTED: geranylgeranyl pyrophosphate synthase 1,
chloroplastic-like [Vitis vinifera]
Length = 380
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 179/351 (50%), Gaps = 62/351 (17%)
Query: 11 NTPLHHHSKTP--LGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMT 68
N P H + P L P + P + S S S A + K P+ YM
Sbjct: 38 NIPHHSVVRLPRNLSIPLLWPTRRPSVTSFSYSYVSAGDTPQKER-----PDFNFKAYML 92
Query: 69 LKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSV 120
KAK +N+AL A+PL ++Y L G+R+H +CI++CELVGG ES+
Sbjct: 93 EKAKSVNQAL--DTAIPLREPLEIHKAMRYSLLDG--GKRIHPIVCISACELVGGQESTA 148
Query: 121 MPLACAAEML--------------------------------VTLALNRALLCYAVEHMA 148
MP+ CA EML VT+ ALL A EH+A
Sbjct: 149 MPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAVDALLALAFEHVA 208
Query: 149 TKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGK 205
T + V P V AI E++ ++G++G++AG+ ++++S+G ++ L L+ I + G
Sbjct: 209 TMSTVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGP 268
Query: 206 LIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-------- 257
L+EAS V G ++GGGS E +E LRK+G+CVGL YQV DDILD K +E G
Sbjct: 269 LLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVA 328
Query: 258 DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYPKL+G+ ++ +A++L +A L+ FD +AA L + +F R
Sbjct: 329 DKVTYPKLVGIEKSREFAEKLNGDAWDMLSEFDQEKAASLLAMVNFATYRQ 379
>gi|424513337|emb|CCO65959.1| geranylgeranyl pyrophosphate synthase [Bathycoccus prasinos]
Length = 376
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 166/301 (55%), Gaps = 57/301 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCE 111
EI +Y+ K I +AL + +VP I ++Y L G+R+ L IA+CE
Sbjct: 78 EIDFAKYVKEKNAAIEQALSD--SVPTIYPERLHESMRYSLLAG--GKRIRPCLAIAACE 133
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
+VGG + VMP ACA EM+ T++L AL
Sbjct: 134 MVGGAQEVVMPTACALEMIHTMSLIHDDLPMMDNDDFRRGVPTNHKVYGEEMAILAGDAL 193
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-----KDVSLSE 194
L +A E++A +TK V ++++R I ++ VG+ G++ G++++I S+G K VSL
Sbjct: 194 LSHAFEYIARETKGVPAEKILRVIADVGKCVGSEGLVGGQVVDIESEGLAMEGKPVSLET 253
Query: 195 LDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE 254
L +I + G L+E +VV G ++GGG+EEDIE+L KY +GLA+QV DDILD +E
Sbjct: 254 LKYIHAHKTGALLETAVVSGAILGGGTEEDIERLGKYAYDIGLAFQVVDDILDCTATSEE 313
Query: 255 ----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVS 306
AG D +ATYP L+G+ ++R A EL+ A ++L+ +D +AAPL LAD++ +
Sbjct: 314 LGKTAGKDVAVGKATYPSLLGLEESQRIADELIKSAKEQLSVYDQKKAAPLIGLADYIKN 373
Query: 307 R 307
R
Sbjct: 374 R 374
>gi|313118274|sp|Q9LRR0.2|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 176/310 (56%), Gaps = 57/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
KSN++N + ++ YM KA+ +N AL + + VPL ++Y L G+RV
Sbjct: 56 KSNDHNSAFDFKL--YMIRKAESVNAAL-DVSIVPLREPLTVQEAVRYSLLAG--GKRVR 110
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIA CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 111 PLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGED 170
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-- 187
A EHM + V+ +R++RA+ E++ A+GT+G++AG++++++S+
Sbjct: 171 MAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLN 230
Query: 188 -KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
DV L L+FI + L+EA+ V G ++GGG+EE+IEKLRKY +C+GL +QV DDIL
Sbjct: 231 PHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDIL 290
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D K +E AG D + TYP+L+G+ ++ A++L EA ++L F+ +AAPL
Sbjct: 291 DVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLV 350
Query: 299 HLADFLVSRH 308
LA ++ R+
Sbjct: 351 ALASYISCRN 360
>gi|15231055|ref|NP_188651.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2.1|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 159/298 (53%), Gaps = 62/298 (20%)
Query: 66 YMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASCELVGGN 116
YM KAK +NKAL E AVPL ++Y L + G+RV LC+A+CELVGG
Sbjct: 53 YMVNKAKSVNKALEE--AVPLREPELKIREAMRYTLLSD--GKRVRPMLCLAACELVGGQ 108
Query: 117 ESSVMPLACAAEML--------------------------------VTLALNRALLCYAV 144
ES+ M ACA EML + + ++AL+ AV
Sbjct: 109 ESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAV 168
Query: 145 EHMATKT-KNVSPDRLVRAIGEISSAV-----GTRGVLAGRIMEINSKGKDVSLSELDFI 198
+ + T +V P+R+++ + E+ AV G + LAG M +S D L L+FI
Sbjct: 169 QKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDS---DTGLEHLEFI 225
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE---- 254
+ L+EA+ V G ++GGGS+E+IE+LR Y +C+GL +QV DD+LD K +E
Sbjct: 226 HIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKT 285
Query: 255 AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
AG D + TYP+LMGV +K YA+ L EA + L FD + APL LAD++V+R
Sbjct: 286 AGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQ 343
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 159/298 (53%), Gaps = 62/298 (20%)
Query: 66 YMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASCELVGGN 116
YM KAK +NKAL E AVPL ++Y L + G+RV LC+A+CELVGG
Sbjct: 53 YMVNKAKSVNKALEE--AVPLREPELKIREAMRYTLLSD--GKRVRPMLCLAACELVGGQ 108
Query: 117 ESSVMPLACAAEML--------------------------------VTLALNRALLCYAV 144
ES+ M ACA EML + + ++AL+ AV
Sbjct: 109 ESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAV 168
Query: 145 EHMATKT-KNVSPDRLVRAIGEISSAV-----GTRGVLAGRIMEINSKGKDVSLSELDFI 198
+ + T +V P+R+++ + E+ AV G + LAG M +S D L L+FI
Sbjct: 169 QKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDS---DTGLEHLEFI 225
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE---- 254
+ L+EA+ V G ++GGGS+E+IE+LR Y +C+GL +QV DD+LD K +E
Sbjct: 226 HIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKT 285
Query: 255 AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
AG D + TYP+LMGV +K YA+ L EA + L FD + APL LAD++V+R
Sbjct: 286 AGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQ 343
>gi|428320077|ref|YP_007117959.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243757|gb|AFZ09543.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 167/309 (54%), Gaps = 54/309 (17%)
Query: 48 LTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGE 99
L + ++ P + Y+ + + I AL +A+P+I ++Y L G+
Sbjct: 3 LATEMGSSQPESSFDLSAYLVKRKEAIEVAL--DSALPVIYPETIYEAMRYSLLAG--GK 58
Query: 100 RVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------ 135
R+ LC+ASCEL GG S +P ACA EM+ T++L
Sbjct: 59 RLRPILCLASCELAGGTTSMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVY 118
Query: 136 --------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
LL YA E +ATKT+NV P ++++ I ++ A G G++ G+++++ S+G
Sbjct: 119 GEDIAILAGDGLLTYAFEFIATKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEG 178
Query: 188 K-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
K DVSL L++I + G L+EA VVCG ++ G S D+++L ++ + +GLA+Q+ DDIL
Sbjct: 179 KTDVSLETLNYIHAHKTGALLEACVVCGGILAGASTADLQRLSRFAQNIGLAFQIIDDIL 238
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D ++E AG D + TYP L G+ ++R A +LVA+A +LA F ++A PL
Sbjct: 239 DITATQEELGKTAGKDVQAGKVTYPSLWGIEESRRQASQLVADAKAQLAVFG-SKALPLL 297
Query: 299 HLADFLVSR 307
+ADF+ SR
Sbjct: 298 AIADFITSR 306
>gi|428215155|ref|YP_007088299.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
gi|428003536|gb|AFY84379.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 308
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 144/251 (57%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASCELVGG MP ACA EM+ T++L
Sbjct: 57 GKRLRPILCLASCELVGGTVEMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E +AT+T+NV R+++AI ++ A G GV+ G++++I
Sbjct: 117 VYGDDIAILAGDGLLVYAFEVVATQTQNVPAPRVLKAIAHLAHAFGADGVVGGQVVDIQC 176
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D ++ L FI + G L+EA VVCG ++GG ++ED+++L +Y + +GLA+Q+ DD
Sbjct: 177 EGKLDTTVETLHFIHTHKTGALLEACVVCGAILGGAADEDLQRLSRYAQNIGLAFQIIDD 236
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K ++E AG D +ATYP + G+ + R A+EL+ +A ELA F +A P
Sbjct: 237 ILDITKTQEELGKTAGKDLQAQKATYPSIWGLEESTRQAQELIEQAKAELASF-GNKAIP 295
Query: 297 LYHLADFLVSR 307
L LADF+ +R
Sbjct: 296 LLTLADFITNR 306
>gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 176/310 (56%), Gaps = 58/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
K N++N + ++ YM KA+ +N AL +VPL ++Y L G+RV
Sbjct: 56 KCNDHNSAFDFKL--YMIRKAESVNAAL--DVSVPLREPLTVQEAVRYSLLAG--GKRVR 109
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIA CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 110 PLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGED 169
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
A EHM + V+P+R++RA+ E++ A+GT G++AG+++++ S+ +
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLN 229
Query: 190 ---VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
V L L+FI + L+EA+ V GV++GGG+EE+IEKLRKY +C+GL +QV DDIL
Sbjct: 230 PDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIL 289
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D K +E AG D + TYP+L+G+ +K A++L EA ++L FDP++AAPL
Sbjct: 290 DVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLV 349
Query: 299 HLADFLVSRH 308
LA ++ RH
Sbjct: 350 ALASYIACRH 359
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 161/299 (53%), Gaps = 55/299 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCE 111
E + + Y+ +I +AL A+VP+ ++Y L G+R+ LC+A+CE
Sbjct: 16 EQEFNAYIKNVNAEIERAL--DASVPMHYPERLSESMRYSLLAG--GKRIRPALCLAACE 71
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
LVGG MP ACA EM+ T++L AL
Sbjct: 72 LVGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDAL 131
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD---VSLSELD 196
L +A E++ +TK VS D+++R I ++ VG+ G++ G++++I S+G D V++ L
Sbjct: 132 LSHAFEYIGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLK 191
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE-- 254
+I + G L+E SV G ++GG SEE I KL +Y + +GLA+QV DDILD +E
Sbjct: 192 YIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEELG 251
Query: 255 --AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
AG D A TYP L+G+ +KR A +L+++A QEL FDP + PL LAD++ +R
Sbjct: 252 KTAGKDMAVGKSTYPSLVGMEESKRIAADLISKAKQELEGFDPVKVKPLIGLADYIQNR 310
>gi|186510058|ref|NP_188073.2| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 176/310 (56%), Gaps = 58/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
K N++N + ++ YM KA+ +N AL +VPL ++Y L G+RV
Sbjct: 56 KCNDHNSAFDFKL--YMIRKAESVNAAL--DVSVPLREPLTVQEAVRYSLLAG--GKRVR 109
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIA CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 110 PLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGED 169
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
A EHM + V+P+R++RA+ E++ A+GT G++AG+++++ S+ +
Sbjct: 170 MAVLAGDALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLN 229
Query: 190 ---VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
V L L+FI + L+EA+ V GV++GGG+EE+IEKLRKY +C+GL +QV DDIL
Sbjct: 230 PDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIL 289
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D K +E AG D + TYP+L+G+ +K A++L EA ++L FDP++AAPL
Sbjct: 290 DVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLV 349
Query: 299 HLADFLVSRH 308
LA ++ RH
Sbjct: 350 ALASYIACRH 359
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 170/310 (54%), Gaps = 58/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
KS++ N YM KAK +N AL +VPL ++Y L G+RV
Sbjct: 56 KSDDRNS--AFDFKSYMINKAKSVNAAL--DISVPLREPLTVQEAVRYSLLAG--GKRVR 109
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIASCELVGGNE++ MP ACA EM+ T +L + L C
Sbjct: 110 PMLCIASCELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGED 169
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-- 187
A EHM + V P+R++RA+ E++ A+GT G++AG+++++ S+
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLN 229
Query: 188 -KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
D L L+FI + L+EA+ V GV++GGG+EE+IEKLRKY +C+GL +QV DDIL
Sbjct: 230 PHDAGLERLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIL 289
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + +E AG D + TYP+L+G+ ++ A++L EA +++ FD +APL
Sbjct: 290 DVTESTEELGKTAGKDLMAGKLTYPRLIGLERSREVAEKLRKEAEEQVLGFDSENSAPLV 349
Query: 299 HLADFLVSRH 308
LA ++ RH
Sbjct: 350 ALASYIACRH 359
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 175/310 (56%), Gaps = 58/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
K N++N + ++ YM KA+ +N AL +VPL ++Y L G+RV
Sbjct: 56 KCNDHNSAFDFKL--YMIRKAESVNAAL--DVSVPLREPLTVQEAVRYSLLAG--GKRVR 109
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIA CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 110 PLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGED 169
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
A EHM + V+P+R++RA+ E++ +GT G++AG+++++ S+ +
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLN 229
Query: 190 ---VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
V L L+FI + L+EA+ V GV++GGG+EE+IEKLRKY +C+GL +QV DDIL
Sbjct: 230 PDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIL 289
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D K +E AG D + TYP+L+G+ +K A++L EA ++L FDP++AAPL
Sbjct: 290 DVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLV 349
Query: 299 HLADFLVSRH 308
LA ++ RH
Sbjct: 350 ALASYIACRH 359
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 124/178 (69%), Gaps = 8/178 (4%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL ++ EH+ T TK VS DR++RAIGE++ +G+ G++AG+++++ S+G DV L L+F
Sbjct: 26 ALLSFSFEHITTATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDVCSEGADVGLDHLEF 85
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE--- 254
I + L+E SVV G ++GGGS+E+IEKLRK+ + +GL +QV DDILD K +E
Sbjct: 86 IHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGK 145
Query: 255 -AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
AG D + TYPKL+G+ ++ +A++L EA ++L+ FD +AAPL LA+++ R
Sbjct: 146 TAGKDLVAGKTTYPKLLGIEKSREFAEKLNKEAQEQLSEFDQRKAAPLIALANYIAYR 203
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368.1|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 144/252 (57%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASCEL GG +P ACA EM+ T++L
Sbjct: 49 GKRIRPILCLASCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHI 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E +AT+TKNV D +V+ I +++ +V T G++ G+I++++S
Sbjct: 109 IYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSS 168
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D +L L+FI + G L+EA+V+ G L+ G E+D+ + +Y + +GLA+Q+ DD
Sbjct: 169 EGKSDTTLETLNFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDD 228
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD + +++ G +ATYP GV + + A+ LV EA +E+ YFD +A P
Sbjct: 229 VLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESIKQAELLVEEAKEEILYFD-NKAIP 287
Query: 297 LYHLADFLVSRH 308
L +ADF+V+R+
Sbjct: 288 LIAIADFIVNRN 299
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 122/175 (69%), Gaps = 9/175 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL +A EHMA T V ++VRAIGE++ ++G+ G++AG++++I+S+G +V L +L+
Sbjct: 41 ALLAFAFEHMAVSTVGVPAAKIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLE 100
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
FI + G L+EASVV G ++GGG++E++EKLR + +C+GL +QV DILD K +E G
Sbjct: 101 FIHLHKTGALLEASVVLGAILGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELG 160
Query: 257 D--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
D+ TYP+LMG+ ++ +A++L EA Q L+ FDP +AAPL LA++
Sbjct: 161 KTAGKDLVADKVTYPRLMGIDKSREFAEQLNTEAKQHLSGFDPIKAAPLIALANY 215
>gi|15228704|ref|NP_189589.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0.1|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 172/310 (55%), Gaps = 58/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
KSN+ N YM KA+ ++ AL +VPL ++Y L G+RV
Sbjct: 53 KSNDRNS--AFDFKSYMIRKAESVSAAL--NVSVPLQEPLTIQEAVRYSLLAG--GKRVR 106
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIA+CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 107 PLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGED 166
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-- 187
A EHM + V+P+R++RA+ E++ A+GT+G++AG++ ++ S+G
Sbjct: 167 MAVLAGDALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLN 226
Query: 188 -KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
DV L L+FI + L+EA+ V G ++GGG+EE+IEKLRKY +C+GL +QV DDIL
Sbjct: 227 PDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDIL 286
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + KE AG D + TYP+L+G+ ++ A++L EA ++L FD +AAPL
Sbjct: 287 DVTESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLV 346
Query: 299 HLADFLVSRH 308
LA ++ RH
Sbjct: 347 ALASYIACRH 356
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 167/310 (53%), Gaps = 55/310 (17%)
Query: 49 TIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGER 100
T +++ + E + + Y+ KI +AL A+VP+ ++Y L G+R
Sbjct: 38 TSGASSTSADSEREFNAYIKGVNAKIERAL--DASVPVHYPERLSESMRYSLLAG--GKR 93
Query: 101 VHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------- 135
+ LC+A+CELVGG+ + MP ACA EM+ T++L
Sbjct: 94 IRPALCLAACELVGGDMETAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYG 153
Query: 136 -------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG- 187
ALL +A E++ +TK S ++++R I ++ VG+ G++ G++++I S+G
Sbjct: 154 EEMAILAGDALLSHAFEYIGRETKGASAEKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGA 213
Query: 188 --KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
++V++ L +I + G L+E SV G ++GG SEE I KL +Y + +GLA+QV DDI
Sbjct: 214 GPENVTVDTLKYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDI 273
Query: 246 LDNMKKKKE----AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD +E AG D A TYP L+G+ +KR A +L+++A EL FDP + PL
Sbjct: 274 LDCTASSEELGKTAGKDVAVGKTTYPSLVGMEESKRIAADLISKAKAELEGFDPVKVRPL 333
Query: 298 YHLADFLVSR 307
LAD++ +R
Sbjct: 334 IGLADYIQNR 343
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 165/311 (53%), Gaps = 64/311 (20%)
Query: 59 PEIQIDEYMTLKAKKINKALFEGAAVPLI-----LQYPTLPNHE---------GERVHGT 104
P+ + YM KAK INKAL + ++PL L P L E G+RV
Sbjct: 29 PDSEFISYMNNKAKSINKALDD--SIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPM 86
Query: 105 LCIASCELVGGNESSVMPLACAAEML---------------------------------V 131
LC+ +CELVGG ES+ MP ACA EM+
Sbjct: 87 LCLVACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTA 146
Query: 132 TLALNRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI-----NS 185
LA N AL+ AVE +A+ + V+ +R++RA+ E++ AVG G++AG+ ++ +
Sbjct: 147 ILAAN-ALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSF 205
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ +D L L+FI + L+EA+ V G ++GGGS+E+IE+L+ Y +CVGL +QV DD+
Sbjct: 206 ETEDEGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDV 265
Query: 246 LDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K +E AG D + TYPK+MGV A+ YAK L EA + L FD + PL
Sbjct: 266 LDETKSSEELGKTAGKDLITGKLTYPKVMGVENAREYAKRLNREAQEHLQGFDSDKVVPL 325
Query: 298 YHLADFLVSRH 308
LAD++V R
Sbjct: 326 LSLADYIVKRQ 336
>gi|409993924|ref|ZP_11277049.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
gi|409935211|gb|EKN76750.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
Length = 316
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 169/318 (53%), Gaps = 58/318 (18%)
Query: 39 SSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQY 90
+ S+ EN+ + S ++ PF + Y++ K + + AL AA+ + ++Y
Sbjct: 6 TDSMVVTENMDL-SGSDTPF---DLSTYLSQKKELVEAAL--DAAITVTYPEKIYESMRY 59
Query: 91 PTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------- 135
+ G+R+ TLC+A+CEL+GG MP ACA EM+ T++L
Sbjct: 60 SLMAG--GKRLRPTLCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRR 117
Query: 136 -----------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAG 178
LL YA E +AT+T+ V P+R+++ IG + AVG G++ G
Sbjct: 118 GKLTNHKVYGDDIAILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGG 177
Query: 179 RIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
++++I S+G DVS L FI + G L+EA VVCG ++ G +E D+E+L +Y K +GL
Sbjct: 178 QVVDIASEGLSDVSEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGL 237
Query: 238 AYQVWDDILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYF 289
A+Q+ DDILD + + K AG D +ATYP L G+ ++ A++LV EA ELA F
Sbjct: 238 AFQIVDDILDITAPSEQLGKTAGKDLEAQKATYPSLWGLEKSRAKAEQLVEEAKAELAAF 297
Query: 290 DPTRAAPLYHLADFLVSR 307
A L +ADF+ R
Sbjct: 298 GYGGKA-LAAIADFITYR 314
>gi|427737891|ref|YP_007057435.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
gi|427372932|gb|AFY56888.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
Length = 311
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 162/310 (52%), Gaps = 51/310 (16%)
Query: 45 AENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL------ILQYPTLPNHEG 98
A+NLT K+ + + + Y+ + K + AL AV ++Y L G
Sbjct: 4 ADNLT-KNETESKQSKFDLSVYLKERQKLVETALDNSIAVVYPEKIYEAMRYSLLAG--G 60
Query: 99 ERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------- 135
+R+ LC+A+CE+ GGN MP ACA EM+ T++L
Sbjct: 61 KRLRPILCLATCEMTGGNTEIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKV 120
Query: 136 ---------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
LL YA E++AT TKNV P ++++ I + AVG G++ G+++++ +
Sbjct: 121 YGDDVAILAGDGLLAYAFEYVATNTKNVPPTQILQVISRLGRAVGAAGLVGGQVVDLEME 180
Query: 187 GK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
GK DVSL L+FI + L+EASVVCG ++ G S EDI+KL++Y + +GLA+Q+ DDI
Sbjct: 181 GKTDVSLETLNFIHNHKTAALLEASVVCGGILSGTSPEDIQKLQRYSQNIGLAFQIVDDI 240
Query: 246 LDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K AG D + TYP L G+ +K+ A+ LV A EL F +A PL
Sbjct: 241 LDITATQEQLGKTAGKDLEAQKVTYPSLWGLEESKKQAQLLVEAACAELEPFGE-QAKPL 299
Query: 298 YHLADFLVSR 307
LA F+ SR
Sbjct: 300 VALAYFITSR 309
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 167/327 (51%), Gaps = 59/327 (18%)
Query: 28 APNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL- 86
A NP+ +P+ + +S + PF + Y+ + + ++ AL + +V
Sbjct: 4 AENPQLETLPQPLT---------RSGSPTPFSGFDLVSYLKERQQWVDAALEQSISVTYP 54
Query: 87 -----ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------ 135
++Y + G+R+ LC+A+CE+ GG MP ACA EM+ T++L
Sbjct: 55 EKIYQAMRYSLMAG--GKRLRPILCLATCEMTGGTVEMAMPTACALEMIHTMSLIHDDLP 112
Query: 136 --------------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSA 169
LL YA E++A KT+ V + L++ + + A
Sbjct: 113 AMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEYVAVKTQGVPAEWLLKVVARLGHA 172
Query: 170 VGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
V G++ G+++++ +G KDVS+ L+FI + G L+EASV+CG + G S+E ++KL
Sbjct: 173 VAATGLVGGQVVDLECEGVKDVSVETLNFIHAHKTGALLEASVLCGAYLTGASDEVLQKL 232
Query: 229 RKYGKCVGLAYQVWDDILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVA 280
+Y + VGLA+Q+ DD+LD ++E AG D + TYP L G+ ++ AK+LV
Sbjct: 233 SRYARNVGLAFQIIDDVLDITATQEELGKTAGKDLRAQKVTYPSLWGIEASRCQAKQLVD 292
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSR 307
EA ELA F RA PL +ADF+ +R
Sbjct: 293 EAKAELATFGE-RAIPLMAIADFVTAR 318
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 160/301 (53%), Gaps = 56/301 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCE 111
E+ Y+ K K I +AL + +VP + ++Y L G+R+ LCIA+CE
Sbjct: 46 ELDFGNYIADKNKAIEQALSD--SVPEMYPERLHESMRYSLLAG--GKRIRPCLCIAACE 101
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
L+GG MP ACA EM+ T++L AL
Sbjct: 102 LMGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDAL 161
Query: 140 LCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD---VSLSEL 195
L +A E++ +T K+V +R +R + ++ VG+ G++ G++++I S+G D V+L L
Sbjct: 162 LSHAFEYIGRETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLETL 221
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK--- 252
+I + G L+E SV G ++ G EED+E+L KY + +GLA+QV DDILD +
Sbjct: 222 KYIHAHKTGALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQL 281
Query: 253 -KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG DE ATYP L+G+ +K+ A +L+ EA + L +DP AAPL LADF+ +R
Sbjct: 282 GKTAGKDEAVGKATYPSLVGLEESKKIADDLITEAKELLRDYDPKLAAPLLGLADFIKNR 341
Query: 308 H 308
Sbjct: 342 Q 342
>gi|428206430|ref|YP_007090783.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
gi|428008351|gb|AFY86914.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
Length = 308
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 140/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CE+ GG MP ACA EM+ T++L
Sbjct: 57 GKRLRPILCLATCEMAGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+TKNV P+R++RAI ++ AVG G++ G+++++ S
Sbjct: 117 VYGDDIAILAGDGLLAYAFEYIATQTKNVPPERVLRAIAQLGHAVGAAGLVGGQVVDLES 176
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK DV+ L FI + L+EA VV G ++ G E D+++L +Y + +GLA+Q+ DD
Sbjct: 177 EGKSDVTADTLHFIHTHKTAALLEACVVSGGVLAGLEESDLQRLSRYAQNIGLAFQIIDD 236
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +E AG D + TYP L G+ ++R A+ L+A A +EL F +A P
Sbjct: 237 ILDVTATAEELGKTAGKDLQAQKVTYPSLWGIEESRRQAQALIATAKEELTPFSE-KAQP 295
Query: 297 LYHLADFLVSR 307
L LADF+ +R
Sbjct: 296 LIALADFITNR 306
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 155/272 (56%), Gaps = 50/272 (18%)
Query: 85 PLILQ----YPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRAL 139
PL +Q Y L G+RV LCIA CELVGG+E++ M ACA EM+ T +L + L
Sbjct: 36 PLTVQEAVRYSLLAG--GKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDL 93
Query: 140 LCY-------------------------------AVEHMATKTKN-VSPDRLVRAIGEIS 167
C A EHM + V+ +R++RA+ E++
Sbjct: 94 PCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELA 153
Query: 168 SAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED 224
A+GT+G++AG++++++S+ DV L L+FI + L+EA+ V G ++GGG+EE+
Sbjct: 154 RAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEE 213
Query: 225 IEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAK 276
IEKLRKY +C+GL +QV DDILD K +E AG D + TYP+L+G+ ++ A+
Sbjct: 214 IEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAE 273
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+L EA ++L F+ +AAPL LA ++ R+
Sbjct: 274 KLSREAEEQLLGFESDKAAPLVALASYISCRN 305
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 158/293 (53%), Gaps = 51/293 (17%)
Query: 63 IDEYMTLKAKKINKALFEGAAVPLI-------LQYPTLPNHEGERVHGTLCIASCELVGG 115
+D Y++ + +++ +AL A VP ++Y L G+R+ LC+A+CEL GG
Sbjct: 8 LDTYLSQRQQQVEEAL-SAALVPAYPERIYEAMRYSLLAG--GKRLRPILCLAACELAGG 64
Query: 116 NESSVMPLACAAEMLVTLAL--------------------------------NRALLCYA 143
+ MP ACA EM+ T++L ALL YA
Sbjct: 65 SVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYA 124
Query: 144 VEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
EH+A++T+ V P +++ I I AV G++ G+++++ S+GK +SL L++I +
Sbjct: 125 FEHIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKT 184
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDE 259
G L+EASVV G ++ G EE + +L Y + +GLA+Q+ DDILD + + K AG D+
Sbjct: 185 GALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSEQLGKTAGKDQ 244
Query: 260 ----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
ATYP L+G+ +++ A+EL+ A + L + ++A PL LADF+ R
Sbjct: 245 AAAKATYPSLLGLEASRQKAEELIQSAKEALRPYG-SQAEPLLALADFITRRQ 296
>gi|15231869|ref|NP_188069.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 155/272 (56%), Gaps = 50/272 (18%)
Query: 85 PLILQ----YPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRAL 139
PL +Q Y L G+RV LCIA CELVGG+E++ M ACA EM+ T +L + L
Sbjct: 14 PLTVQEAVRYSLLAG--GKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDL 71
Query: 140 LCY-------------------------------AVEHMATKTKN-VSPDRLVRAIGEIS 167
C A EHM + V+ +R++RA+ E++
Sbjct: 72 PCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELA 131
Query: 168 SAVGTRGVLAGRIMEINSKG---KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED 224
A+GT+G++AG++++++S+ DV L L+FI + L+EA+ V G ++GGG+EE+
Sbjct: 132 RAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEE 191
Query: 225 IEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAK 276
IEKLRKY +C+GL +QV DDILD K +E AG D + TYP+L+G+ ++ A+
Sbjct: 192 IEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAE 251
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+L EA ++L F+ +AAPL LA ++ R+
Sbjct: 252 KLSREAEEQLLGFESDKAAPLVALASYISCRN 283
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 140/252 (55%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ +CEL+GG +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLTTCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E+ AT+T+NV P L+ +G + VG G++ G+++++ S
Sbjct: 118 KYGEDIAILAGDGLLAYAFEYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+++ L FI + G L+E SVV G ++ GGS EDI++L +Y + +GLA+Q+ DD
Sbjct: 178 EGKPDITVDTLKFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E G D +ATYP L G+ +K+ A+ LV+ A +L + +A P
Sbjct: 238 ILDITSTQEELGKTAGKDLRDQKATYPSLWGLEESKKQAQNLVSGAIAQLTPYG-NKAEP 296
Query: 297 LYHLADFLVSRH 308
L +A+F+V+R+
Sbjct: 297 LRAIANFIVTRN 308
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 159/298 (53%), Gaps = 54/298 (18%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
Y++ +A +N AL A+P ++Y L G+RV L +A+CEL
Sbjct: 20 FDFQRYLSARADAVNDALDR--AMPRGFPERLCESMRYSVLAG--GKRVRPVLALAACEL 75
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG+ ++ P+ACA EM+ T++L AL
Sbjct: 76 VGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALH 135
Query: 141 CYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
A EH+A + V DR +RA+ E+ SA GT GV AG++ + S+G VSL+ L++I
Sbjct: 136 ALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYI 195
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD- 257
+ +L+EA+ V G ++GGG++ ++E++R+Y +CVGL +QV DD+LD ++ G
Sbjct: 196 HVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKT 255
Query: 258 -------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKL+GV A+ YA +L+A A EL FD RAAPL HLA F+ R
Sbjct: 256 AGKDVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQ 313
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 162/303 (53%), Gaps = 62/303 (20%)
Query: 66 YMTLKAKKINKALFEGAAVPLI-----LQYPTLPNHE---------GERVHGTLCIASCE 111
YM KAK INKAL ++PL L P L H+ G+RV LC+ +CE
Sbjct: 42 YMNNKAKSINKAL--DNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCLVACE 99
Query: 112 LVGGNESSVMPLACAAEML--------------------------------VTLALNRAL 139
LVGG ES+ MP ACA EM+ ++ + AL
Sbjct: 100 LVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILASNAL 159
Query: 140 LCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI-----NSKGKDVSLS 193
+ AV+ +A+ + V+ +R++RA+ E++ AVGT G++AG+ ++ + K +D L
Sbjct: 160 MSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELR 219
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
L+ + + L+EA+ V G ++GGGS+E+IE+L+ Y +CVGL +QV DD+LD K +
Sbjct: 220 YLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSE 279
Query: 254 E----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E AG D + TYPK+MGV A+ YAK L EA + L FD + PL LAD++V
Sbjct: 280 ELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIV 339
Query: 306 SRH 308
R
Sbjct: 340 KRQ 342
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 138/251 (54%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG MP AC+ EM+ T++L
Sbjct: 36 GKRLRPILCLATCELAGGTMEMAMPTACSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHK 95
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E +AT+T NV P +++ IG + AVG G++ G+++++ S
Sbjct: 96 VYGEDIAILAGDGLLSYAFEFVATQTTNVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVES 155
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D++ +L FI + G L+EA VV G ++ G S E+ E+L +Y + +GLA+Q+ DD
Sbjct: 156 EGKTDITEEQLTFIHTHKTGALLEACVVSGAILAGTSTENRERLSRYAQKIGLAFQIVDD 215
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D +ATYP L G+ +KR A +L+AEA ELA F A P
Sbjct: 216 ILDITATQEELGKTAGKDLTAQKATYPSLWGLEESKRRANQLIAEAQAELAPFGEA-ATP 274
Query: 297 LYHLADFLVSR 307
L LA F+ SR
Sbjct: 275 LVALAQFITSR 285
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 155/262 (59%), Gaps = 29/262 (11%)
Query: 67 MTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCELVGGNES 118
M KAK +N+AL A+PL ++Y L G+R+H +CI++CELVGG ES
Sbjct: 1 MLEKAKSVNQAL--DTAIPLREPLEIHKAMRYSLLDG--GKRIHPIVCISACELVGGQES 56
Query: 119 SVMPLACAAEMLVTLALNRALL-CYAVEHMATKTKNVSPDRLVRAIGE--ISSAVGTRGV 175
+ MP+ CA EML ++L + L C + + + P +A GE ++ ++G++G+
Sbjct: 57 TAMPVVCAVEMLHVVSLMQDDLPCMDNDDI----RRGKPSNH-KAFGESELARSIGSQGL 111
Query: 176 LAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKC 234
+AG+ ++++S+G ++ L L+ I + G L+EAS V G ++GGGS E +E LRK+G+C
Sbjct: 112 VAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRC 171
Query: 235 VGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQEL 286
VGL YQV DDILD K +E G D+ TYPKL+G+ ++ +A++L +A L
Sbjct: 172 VGLLYQVVDDILDITKSTQELGKTAGKDLVADKVTYPKLVGIEKSREFAEKLNGDAWDML 231
Query: 287 AYFDPTRAAPLYHLADFLVSRH 308
+ FD +AA L + +F R
Sbjct: 232 SEFDQEKAASLLAMVNFATYRQ 253
>gi|434399896|ref|YP_007133900.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
gi|428270993|gb|AFZ36934.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
Length = 320
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 142/252 (56%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG+ +P ACA EM+ T++L
Sbjct: 69 GKRLRPILCLATCELTGGSNEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 128
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+TKNV +R+V+ I + VG G++ G+++++ S
Sbjct: 129 VYGEDIAILAGDGLLAYAFEYVATQTKNVPAERIVKVIARLGRTVGAEGLVGGQVLDLES 188
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+EASVV G ++ G SEED+ +L KY + +GLA+Q+ DD
Sbjct: 189 EGKSDISAETLTFIHTHKTGALLEASVVSGAILSGASEEDLARLSKYAQNIGLAFQIIDD 248
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + + K AG D +ATYP L G+ ++ A++L+ EA +L + +A P
Sbjct: 249 ILDITATDEQLGKTAGKDLQAQKATYPSLWGIEKSQHQAEKLINEAIAQLKPYG-NKAKP 307
Query: 297 LYHLADFLVSRH 308
L +A F+V+R+
Sbjct: 308 LEAIARFIVTRN 319
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 155/290 (53%), Gaps = 51/290 (17%)
Query: 66 YMTLKAKKINKALFEGAAVPLI-------LQYPTLPNHEGERVHGTLCIASCELVGGNES 118
Y++ + +++ +AL A VP ++Y L G+R+ LC+A+CEL GG
Sbjct: 11 YLSQRQQQVEEAL-SAALVPAYPERIYEAMRYSLLAG--GKRLRPILCLAACELAGGTVE 67
Query: 119 SVMPLACAAEMLVTLAL--------------------------------NRALLCYAVEH 146
+P ACA EM+ T++L ALL +A EH
Sbjct: 68 QALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFAFEH 127
Query: 147 MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKL 206
+A++T+ V P +++ I I AV G++ G+++++ S+GK +SL L++I + G L
Sbjct: 128 IASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGAL 187
Query: 207 IEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDE--- 259
+E SVV G ++ GG EE + L +Y + +GLA+Q+ DDILD + + K AG D+
Sbjct: 188 LEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSEQLGKTAGKDQAAA 247
Query: 260 -ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
ATYP L+G+ +++ A+EL+ A + L + P RA PL LADF+ R
Sbjct: 248 KATYPSLLGLEASRQKAEELIQSAKETLRPYGP-RAEPLLALADFITRRQ 296
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 165/306 (53%), Gaps = 62/306 (20%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASC 110
E YM +A +N+AL AA+P ++Y L G+RV LC+A+C
Sbjct: 68 EFDFKAYMGERAVAVNRAL--DAAIPAGEPPAALHDAMRYALLAG--GKRVRPALCLAAC 123
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
+VGG E+ MP A A EM+ T++L A
Sbjct: 124 AVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDA 183
Query: 139 LLCYAVEHMATKTK---NVSPD----RLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-- 189
LL + HMA+ +V P+ R+VRAIGE++ +G+ G++AG+++++ G
Sbjct: 184 LLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSEP 243
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L L++I + L+EASVV G +IGGG++E IE+LRKY + +GL +QV DDILD
Sbjct: 244 VPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVT 303
Query: 250 KKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K +E G D+ TYPKL+G+ ++ +A++L+++A ++L FD +AAPL HLA
Sbjct: 304 KSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAIEQLDCFDKEKAAPLLHLA 363
Query: 302 DFLVSR 307
+++ R
Sbjct: 364 NYIAHR 369
>gi|411120370|ref|ZP_11392744.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709751|gb|EKQ67264.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 308
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 160/299 (53%), Gaps = 56/299 (18%)
Query: 60 EIQID--EYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIAS 109
E Q D Y+ + ++ AL ++P+I ++Y + G+R+ LC+A+
Sbjct: 13 EFQFDLATYLAERQAQVEAAL--DRSLPIIYPEKIYEAMRYSLMAG--GKRLRPILCLAT 68
Query: 110 CELVGGNESSVMPLACAAEMLVTLAL--------------------------------NR 137
CEL GG MP ACA EM+ T++L
Sbjct: 69 CELTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDVAILAGD 128
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
LL YA EH+A +TK V+P+RL++ + + AVG G++ G+++++ +GK DVSL L+
Sbjct: 129 GLLAYAFEHVAIETKGVAPERLLKVVAMLGRAVGAAGLVGGQVVDLECEGKSDVSLETLN 188
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE-- 254
FI + L+EASV G ++ G S+ED+++L +Y + +GLA+Q+ DDILD ++E
Sbjct: 189 FIHNHKTAALLEASVTSGAVLSGASDEDVQRLLRYAQNIGLAFQIVDDILDITATQEELG 248
Query: 255 --AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
AG D +ATYP + G+ ++R A +L+++A EL F +A L +ADF+ +R
Sbjct: 249 KTAGKDLTAQKATYPSIWGLEESRRQADKLISDAKSELGLFGE-KAIALVAIADFITAR 306
>gi|357122245|ref|XP_003562826.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 356
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 164/307 (53%), Gaps = 62/307 (20%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASC 110
E YM +A +N+AL AA+P ++Y L G+RV LC+ASC
Sbjct: 53 EFDFKAYMGERAVAVNQAL--DAAIPAGEPPAALHDAMRYALLAG--GKRVRPALCLASC 108
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
+VGG E+ M A A EM+ T++L A
Sbjct: 109 VVVGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDA 168
Query: 139 LLCYAVEHMATKTK---NVSPD----RLVRAIGEISSAVGTRGVLAGRIMEINSKG--KD 189
LL + HMA+ +V P+ R+VR IGE++ +G+ G++AG+++++ G +
Sbjct: 169 LLSLSFGHMASMDSYPPDVDPEKHPARVVRGIGELARCIGSEGLVAGQVVDLEMTGSTET 228
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L L++I + L+EASVV G +IGGGS+E IE+LRKY + +GL +QV DDILD
Sbjct: 229 VPLDRLEYIHLHKTAALLEASVVIGAIIGGGSDEQIERLRKYARSIGLLFQVVDDILDVT 288
Query: 250 KKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K +E G D+ TYPKL+G+ ++ +A++L+ +A ++LA FD +AAPL +LA
Sbjct: 289 KSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLCDAKEQLADFDKEKAAPLLYLA 348
Query: 302 DFLVSRH 308
+++ R
Sbjct: 349 NYIAYRQ 355
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 171/308 (55%), Gaps = 54/308 (17%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKAL------FEGAAVPLILQYPTLPNHEGERVHGT 104
KSN+ N YM KA+ ++ AL + A+ ++Y L G+RV
Sbjct: 56 KSNDRNF--AFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAG--GKRVRPL 111
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY--------------------- 142
LCIA+CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 112 LCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMA 171
Query: 143 ----------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---K 188
A EHM + V+P+R++R++ E++ A+GT+G++AG++ ++ S+G
Sbjct: 172 VLAGDALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPY 231
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
DV L L+FI + L+EA+ V G +IGGG+EE+I+KLRKYG+C+GL +QV DDI+D
Sbjct: 232 DVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDV 291
Query: 249 MKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
+ +E AG D + TYP+L+G+ ++ A++L EA ++L FD + APL L
Sbjct: 292 TESTEELGKTAGKDVKARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVAL 351
Query: 301 ADFLVSRH 308
A ++ RH
Sbjct: 352 ASYIACRH 359
>gi|15232010|ref|NP_189747.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4.1|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 171/308 (55%), Gaps = 54/308 (17%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKAL------FEGAAVPLILQYPTLPNHEGERVHGT 104
KSN+ N YM KA+ ++ AL + A+ ++Y L G+RV
Sbjct: 56 KSNDRNF--AFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAG--GKRVRPL 111
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY--------------------- 142
LCIA+CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 112 LCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMA 171
Query: 143 ----------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---K 188
A EHM + V+P+R++R++ E++ A+GT+G++AG++ ++ S+G
Sbjct: 172 VLAGDALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPY 231
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
DV L L+FI + L+EA+ V G +IGGG+EE+I+KLRKYG+C+GL +QV DDI+D
Sbjct: 232 DVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDV 291
Query: 249 MKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
+ +E AG D + TYP+L+G+ ++ A++L EA ++L FD + APL L
Sbjct: 292 TESTEELGKTAGKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVAL 351
Query: 301 ADFLVSRH 308
A ++ RH
Sbjct: 352 ASYIACRH 359
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 159/298 (53%), Gaps = 54/298 (18%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
Y++ +A ++ AL A+P ++Y L G+RV L +A+CEL
Sbjct: 82 FDFQRYLSARADAVHDALDR--AMPRGFPERLCESMRYSVLAG--GKRVRPVLALAACEL 137
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG+ ++ P+ACA EM+ T++L AL
Sbjct: 138 VGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALH 197
Query: 141 CYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
A EH+A + V DR +RA+ E+ SA GT GV AG++ + S+G VSL+ L++I
Sbjct: 198 ALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYI 257
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD- 257
+ +L+EA+ V G ++GGG++ ++E++R+Y +CVGL +QV DD+LD ++ G
Sbjct: 258 HVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKT 317
Query: 258 -------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ATYPKL+GV A+ YA +L+A A EL FD RAAPL HLA F+ R
Sbjct: 318 AGKDVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQ 375
>gi|428311367|ref|YP_007122344.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
gi|428252979|gb|AFZ18938.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
Length = 309
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 140/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CELVGG MP ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELVGGTLEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T+NV ++++ + + AVG G++ G+++++ S
Sbjct: 118 VYGDDIAILAGDGLLAYAFEYVATQTQNVPAHQVLQVVARLGRAVGAAGLVGGQVVDLES 177
Query: 186 KG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G D+ L FI + G L+EA VVCG ++GG ++E+IE+L +Y K +GLA+Q+ DD
Sbjct: 178 EGNSDIQEETLTFIHTHKTGALLEACVVCGGILGGVTDEEIERLSRYAKNIGLAFQIVDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D +ATYP L G+ +K A++L+ A EL F +A P
Sbjct: 238 ILDITATQEELGKTAGKDLLAQKATYPSLWGIEASKTKAQQLIDAAKAELELFGE-KAQP 296
Query: 297 LYHLADFLVSR 307
L +ADF+ +R
Sbjct: 297 LLAIADFITTR 307
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 144/254 (56%), Gaps = 45/254 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GGN ++ MP A A EM+ T++L
Sbjct: 50 GKRLRPILCLAACELAGGNVAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ VSP+ +++ IGE+S A G G++ G+++++ S
Sbjct: 110 VYGEATAILAGDALLTRAFEIVALRSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLES 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V+L L++I + G L+ A V+CG LIG S+E ++ LR Y + +GLA+Q+ DDI
Sbjct: 170 EGKEVNLDTLEYIHLHKTGALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDI 229
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAA 295
LD K AG D+ TYPKL+G+ ++ A++LVAEA Q L DP RAA
Sbjct: 230 LDVTASSDVLGKTAGKDLVADKTTYPKLLGLKASRERAEQLVAEAKQGL---DPWRDRAA 286
Query: 296 PLYHLADFLVSRHK 309
PL LAD++ R +
Sbjct: 287 PLLALADYITGRDR 300
>gi|15222767|ref|NP_175376.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|85540951|sp|O22043.2|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 62/303 (20%)
Query: 66 YMTLKAKKINKALFEGAAVPLI-----LQYPTLPNHE---------GERVHGTLCIASCE 111
YM KAK INKAL ++PL L P L H+ G+RV LC+ +CE
Sbjct: 35 YMKNKAKSINKAL--DNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACE 92
Query: 112 LVGGNESSVMPLACAAEML--------------------------------VTLALNRAL 139
LVGG ES+ MP ACA EM+ ++ + AL
Sbjct: 93 LVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNAL 152
Query: 140 LCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI-----NSKGKDVSLS 193
AV+ +A+ + V+ +R++RA+ E++ AVGT G++AG+ ++ + K +D L
Sbjct: 153 RSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELR 212
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
L+ + + L+EA+ V G ++GGGS+E+IE+L+ Y +CVGL +QV DD+LD K +
Sbjct: 213 YLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSE 272
Query: 254 E----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E AG D + TYPK+MGV A+ YAK L EA + L FD + PL LAD++V
Sbjct: 273 ELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIV 332
Query: 306 SRH 308
R
Sbjct: 333 KRQ 335
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|376002372|ref|ZP_09780207.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|423067929|ref|ZP_17056719.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|375329252|emb|CCE15960.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|406710557|gb|EKD05765.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
Length = 316
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 162/309 (52%), Gaps = 54/309 (17%)
Query: 46 ENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL------ILQYPTLPNHEGE 99
EN+ + S ++ PF + Y++ K + + AL AV ++Y + G+
Sbjct: 13 ENMDL-SGSDRPF---DLSTYLSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAG--GK 66
Query: 100 RVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------ 135
R+ LC+A+CEL+GG MP ACA EM+ T++L
Sbjct: 67 RLRPILCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVY 126
Query: 136 --------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
LL YA E +AT+T+ V P+R+++ IG + AVG G++ G+++++ S+G
Sbjct: 127 GEDIAILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEG 186
Query: 188 -KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
D+S L FI + G L+EA VVCG ++ G +E D+E+L +Y K +GLA+Q+ DDIL
Sbjct: 187 LSDISEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDIL 246
Query: 247 D----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + + K AG D +ATYP L G+ ++ A++LV EA EL F A L
Sbjct: 247 DITVPSSELGKTAGKDLEAQKATYPSLWGLEKSRAKAQQLVEEAKAELQAFGNGGCA-LA 305
Query: 299 HLADFLVSR 307
+ADF+ R
Sbjct: 306 AIADFITYR 314
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 165/308 (53%), Gaps = 64/308 (20%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL---------ILQYPTLPNHEGERVHGTLCIASC 110
E YM +A +N AL AAVP ++Y L G+RV LC+A+C
Sbjct: 55 EFDFKAYMGERAVAVNGAL--DAAVPAGEPPATLHEAMRYALLAG--GKRVRPALCLAAC 110
Query: 111 ELVGGNESSVMPLACAAEMLVTLALNRALL--------------CYAV------------ 144
+ GG E+ M A A EM+ T++L L C+ +
Sbjct: 111 VVSGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDA 170
Query: 145 ------EHMATKTKNVSPD--------RLVRAIGEISSAVGTRGVLAGRIMEINSKG--K 188
+HMA+ + PD R+VRAIGE++ +G+ G++AG+++++ G +
Sbjct: 171 LLALAFQHMAS-VDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 229
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
V L L++I + L+EASVV G +IGGGSEE IE+LRKY + +GL +QV DDILD
Sbjct: 230 PVPLDRLEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDV 289
Query: 249 MKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
K +E G D+ TYPKL+G+ ++ +A++L+++A ++LAYF+ +AAPL +L
Sbjct: 290 TKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLYL 349
Query: 301 ADFLVSRH 308
A+++ R
Sbjct: 350 ANYIAYRQ 357
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 160/293 (54%), Gaps = 54/293 (18%)
Query: 65 EYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGN 116
+Y++ + + + AL A++P++ ++Y L G+R+ LC+A+CEL GG
Sbjct: 13 DYLSQRRELVEAAL--DASIPVVYPEKIYEAMRYSLLAG--GKRLRPILCLAACELAGGT 68
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
MP ACA EM+ T++L LL YA
Sbjct: 69 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAY 128
Query: 145 EHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRC 203
EH+A +T+ V P+++++ + + AV G++ G+++++ S+G +DV+LS L+FI +
Sbjct: 129 EHVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKT 188
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDD- 258
G L+EASV+ G + G S++ + + K+ + +GLA+Q+ DD+LD + K K AG D
Sbjct: 189 GALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEKLGKTAGKDV 248
Query: 259 ---EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ATYP L G+ +KR A+ L+ EA ELA + ++APL LADF+ SR
Sbjct: 249 AAQKATYPSLWGIPESKRQAQHLIEEAKAELAVYG-EQSAPLQALADFITSRQ 300
>gi|359458569|ref|ZP_09247132.1| geranylgeranyl diphosphate synthase [Acaryochloris sp. CCMEE 5410]
Length = 316
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 161/293 (54%), Gaps = 54/293 (18%)
Query: 65 EYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGN 116
+Y++ + + + AL A++P++ ++Y + G+R+ LC+A+CEL GG
Sbjct: 28 DYLSQRRELVEAAL--DASIPVVYPEKIYEAMRYSLMAG--GKRLRPILCLAACELAGGT 83
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
MP ACA EM+ T++L LL YA
Sbjct: 84 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAY 143
Query: 145 EHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRC 203
EH+A +T+ V P+++++ + + AV G++ G+++++ S+G +DV+LS L+FI +
Sbjct: 144 EHVAIQTQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKT 203
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDD- 258
G L+EASV+ G + G +++ +++ K+ + +GLA+Q+ DD+LD + K K AG D
Sbjct: 204 GALLEASVLSGAELAGANQDLLDRCSKFARNIGLAFQIIDDVLDVTATSEKLGKTAGKDV 263
Query: 259 ---EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ATYP L G+ +KR A+ L+ EA ELA + ++APL LADF+ SR
Sbjct: 264 AAQKATYPSLWGIPESKRQAQHLIEEAKAELAVYG-EQSAPLQALADFITSRQ 315
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 162/305 (53%), Gaps = 60/305 (19%)
Query: 61 IQIDEYMTLKAKKINKALFEG-------AAVPLILQYPTLPNHEGERVHGTLCIASCELV 113
+ YM KA +N+AL AA+ ++Y L G+RV LC+A+C +V
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAG--GKRVRPALCLAACAVV 121
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GG E+ MP A A EM+ T++L ALL
Sbjct: 122 GGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLS 181
Query: 142 YAVEHMATKTKNVSPD--------RLVRAIGEISSAVGTRGVLAGRIMEINSKG--KDVS 191
+ HMA + + PD R+VRAIGE++ +G+ G++AG+++++ G + V
Sbjct: 182 LSFHHMA-RFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVP 240
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK 251
L L++I + L+EASVV G ++GGGS+E IE LR Y + +GL +QV DDILD K
Sbjct: 241 LERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKS 300
Query: 252 KKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
+E G D+ TYPKL+G+ ++ +A++L+++A ++L+ FD AAPL HLA++
Sbjct: 301 SEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANY 360
Query: 304 LVSRH 308
+ R
Sbjct: 361 IAYRQ 365
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 162/305 (53%), Gaps = 60/305 (19%)
Query: 61 IQIDEYMTLKAKKINKALFEG-------AAVPLILQYPTLPNHEGERVHGTLCIASCELV 113
+ YM KA +N+AL AA+ ++Y L G+RV LC+A+C +V
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAG--GKRVRPALCLAACAVV 121
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GG E+ MP A A EM+ T++L ALL
Sbjct: 122 GGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLS 181
Query: 142 YAVEHMATKTKNVSPD--------RLVRAIGEISSAVGTRGVLAGRIMEINSKG--KDVS 191
+ HMA + + PD R+VRAIGE++ +G+ G++AG+++++ G + V
Sbjct: 182 LSFHHMA-RFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVP 240
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK 251
L L++I + L+EASVV G ++GGGS+E IE LR Y + +GL +QV DDILD K
Sbjct: 241 LERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKS 300
Query: 252 KKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
+E G D+ TYPKL+G+ ++ +A++L+++A ++L+ FD AAPL HLA++
Sbjct: 301 SEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANY 360
Query: 304 LVSRH 308
+ R
Sbjct: 361 IAYRQ 365
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 141/254 (55%), Gaps = 45/254 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCIA+CEL GG + +P A A EM+ T++L
Sbjct: 56 GKRLRPILCIAACELAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 115
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL + E +A ++K V+P+RL++ +GE+S G G++ G+++++
Sbjct: 116 VYGDAVAILAGDALLTRSFEMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLEC 175
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L+FI + G L+ A V+CG LIGG ++ I+ LR Y + +GLA+Q+ DDI
Sbjct: 176 EGKEVDLETLEFIHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDI 235
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAA 295
LD K AG D+ TYPKL+G+ ++R A+ LV+EA A DP + AA
Sbjct: 236 LDVTASSDVLGKTAGKDLLADKTTYPKLLGLEESRRRAELLVSEAK---AALDPWQSSAA 292
Query: 296 PLYHLADFLVSRHK 309
PL LAD++ SR +
Sbjct: 293 PLLALADYITSRDR 306
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+C+L+GG MP ACA EM+ T++L
Sbjct: 56 GKRLRPILCLATCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 115
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T+NV P++++ I + VG G++ G+++++ S
Sbjct: 116 VYGEDIAILAGDGLLSYAFEYVATQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLES 175
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D++ L FI + G L+E SVV G ++ G + E++EKL +Y + +GLA+Q+ DD
Sbjct: 176 EGKSDITPETLTFIHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDD 235
Query: 245 ILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E G +ATYP L G+ +K A++LV EA +LA + +A P
Sbjct: 236 ILDITATQEELGKSIGKDVQAQKATYPSLWGIEESKVQAQKLVDEAIAQLAPYSE-KAEP 294
Query: 297 LYHLADFLVSR 307
L +A F+V+R
Sbjct: 295 LRAIAQFIVTR 305
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 175/310 (56%), Gaps = 58/310 (18%)
Query: 51 KSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVH 102
K N++N + ++ YM KA+ +N AL +VPL ++Y L G+RV
Sbjct: 56 KCNDHNSAFDFKL--YMIRKAESVNAAL--DVSVPLREPLTVQEAVRYSLLAG--GKRVR 109
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCY------------------- 142
LCIA CELVGG+E++ M ACA EM+ T +L + L C
Sbjct: 110 PLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGED 169
Query: 143 ------------AVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
A EHM + V+P+R++RA+ E++ A+GT G++AG+++++ S+ +
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLN 229
Query: 190 ---VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
V L L+FI + L+EA+ V GV++GGG+EE+IEKLRKY +C+GL +QV DDI
Sbjct: 230 PDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIP 289
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D K +E AG D + TYP+L+G+ +K A+EL EA ++L FDP++AAPL
Sbjct: 290 DVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEELRREAEEQLLGFDPSKAAPLV 349
Query: 299 HLADFLVSRH 308
LA ++ RH
Sbjct: 350 ALASYIACRH 359
>gi|425459314|ref|ZP_18838800.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
gi|389822992|emb|CCI29162.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
Length = 326
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 141/251 (56%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 75 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 134
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T+NV P +++ I + VG G++ G+++++ S
Sbjct: 135 VFGEDIAILAGDGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 194
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 195 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 254
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A++L+ A EL+ +D A P
Sbjct: 255 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEP 313
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 314 LRAIAEYIVNR 324
>gi|443328518|ref|ZP_21057114.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
gi|442791817|gb|ELS01308.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
Length = 310
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+C L GG+ MP ACA EM+ T++L
Sbjct: 59 GKRLRPILCLATCRLTGGSTEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 118
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++A KT NV+P+ +++ I + + VG G++ G+++++ S
Sbjct: 119 VYGEDVAILAGDGLLAYAFEYVANKTDNVAPENIIKVIARLGNTVGAEGLVGGQVLDLES 178
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D++ L FI + G L+E SVV G ++ G S E+I KL KY + +GLA+Q+ DD
Sbjct: 179 EGKTDITAETLSFIHTHKTGALLETSVVTGAILAGASAEEIIKLTKYSQNIGLAFQIIDD 238
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + + K AG D +ATYP L G+ ++ A++L+AEA +LA + A P
Sbjct: 239 ILDITATDEQLGKTAGKDLAAQKATYPSLWGLEKSQAEAEKLIAEALDQLASYGEA-AEP 297
Query: 297 LYHLADFLVSRH 308
L +A F+V+R+
Sbjct: 298 LRAIAKFIVTRN 309
>gi|425457244|ref|ZP_18836950.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
gi|389801481|emb|CCI19370.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
Length = 309
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 140/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTLNVPPVQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 EGKPDISAETLSFIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A++L+ A EL+ +D A P
Sbjct: 238 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|428203147|ref|YP_007081736.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427980579|gb|AFY78179.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 309
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG MP ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELTGGTTEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++A +T+NV P R++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVAAQTQNVPPQRILDVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S+ L FI + G L+E SVV G ++ G S+++I++L KY + +GLA+Q+ DD
Sbjct: 178 EGKSDISVDTLTFIHTHKTGALLETSVVSGAMLAGASDDEIQRLSKYAQDIGLAFQIVDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D +ATYP L G+ +++ A++LV A ELA + A P
Sbjct: 238 ILDITATQEELGKTAGKDLQAQKATYPSLWGLEESRKQAQQLVDAAIAELASYGEG-AEP 296
Query: 297 LYHLADFLVSR 307
L +A ++V+R
Sbjct: 297 LRAIASYIVTR 307
>gi|434391876|ref|YP_007126823.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
gi|428263717|gb|AFZ29663.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
Length = 308
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 56/311 (18%)
Query: 48 LTIKSNNNNPFPEIQID--EYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHE 97
+ + N P ++ D Y+ + ++ AL A+P+ ++Y L
Sbjct: 1 MVVTDNPQTPQEKVPFDLPAYLQQRQSQVEAAL--DRAIPIAYPEKIYEAMRYSLLAG-- 56
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG +P ACA EM+ T++L
Sbjct: 57 GKRLRPILCLATCELAGGTTEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGMLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++A KT+NV R+++ I + AVG G++ G+++++ S
Sbjct: 117 VYGEDIAILAGDGLLAYAFEYVAAKTENVPAPRVLQVISRLGRAVGAAGLVGGQVVDLES 176
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK DVS+ L+FI + L+EA V CG ++ G E D+++L +Y + +GLA+Q+ DD
Sbjct: 177 EGKADVSIDTLNFIHNHKTAALLEACVACGAILAGAPEADLQRLTRYAQNIGLAFQIVDD 236
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D +ATYP + G+ ++R A++L+ A EL F +A P
Sbjct: 237 ILDITATQEELGKTAGKDLQAQKATYPSIWGLEESQRQARQLIQAAIAELDSFG-EKALP 295
Query: 297 LYHLADFLVSR 307
L +A+F+ SR
Sbjct: 296 LQAIAEFITSR 306
>gi|425446281|ref|ZP_18826289.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
gi|389733543|emb|CCI02694.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
Length = 309
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 140/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A++L+ A EL+ +D A P
Sbjct: 238 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|428224789|ref|YP_007108886.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984690|gb|AFY65834.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
Length = 315
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 159/307 (51%), Gaps = 57/307 (18%)
Query: 50 IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERV 101
I PF + Y+T + ++ AL A+VP+ ++Y L G+R+
Sbjct: 15 IAPQRETPF---DLKAYLTARQVQVEAAL--DASVPMSYPETVYEAMRYSLLAG--GKRL 67
Query: 102 HGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------------- 135
LC+A+CEL GG MP ACA EM+ T++L
Sbjct: 68 RPILCLATCELAGGTSEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGE 127
Query: 136 ------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK- 188
LL Y+ E++A++T+NV +R+++ + +++ AVG G++ G+++++ S+G+
Sbjct: 128 DVAILAGDGLLAYSFEYIASQTRNVPAERVLQVVTQVARAVGAAGLVGGQVVDLESEGRS 187
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
DVS+ L++I + L+EASVV G ++ G S E + L +Y + +GLA+Q+ DDILD
Sbjct: 188 DVSIETLNYIHTHKTAALLEASVVSGAVLAGASAELQQSLSRYAQNIGLAFQIVDDILDI 247
Query: 249 MKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
++E G + TYP L G+ ++R A +L+ A EL +P A PL +
Sbjct: 248 TATQEELGKSVGKDLQAQKVTYPSLWGIEESQRQAAQLIESAKAELDATNPN-AQPLLAI 306
Query: 301 ADFLVSR 307
AD++V+R
Sbjct: 307 ADYIVAR 313
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 52/309 (16%)
Query: 48 LTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGE 99
+ + ++P PE D + L + +AVP+ ++Y L G+
Sbjct: 1 MVLVRETHSPQPESSFDLSVYLAERAAAVEAALDSAVPVTYPEKIYEAMRYSLLAG--GK 58
Query: 100 RVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------ 135
R+ LC+A+CEL+GG MP ACA EM T++L
Sbjct: 59 RLRPILCLATCELLGGTVEMAMPTACAFEMSHTMSLIHDDLPAMDNDDYRRGKLTNHKVY 118
Query: 136 --------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
LL YA E +A +T+NV P ++++ + + AVG ++ G+++++ S+G
Sbjct: 119 GEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQVVARLGRAVGAAELVGGQVVDLESEG 178
Query: 188 -KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
DVS L+FI + G L+EA VVCG ++ G D+++L +Y + +GLA+Q+ DDIL
Sbjct: 179 VSDVSEETLNFIHTHKTGALLEACVVCGAILAGAEPTDLQRLSRYAQNIGLAFQIVDDIL 238
Query: 247 DNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D ++E AG D + TYP L G+ +KR AK+LV A EL F +A PL
Sbjct: 239 DITATQEELGKTAGKDVQAGKVTYPSLWGIEESKRRAKQLVEAAKAELTIFGE-KAEPLL 297
Query: 299 HLADFLVSR 307
+ADF+ +R
Sbjct: 298 AIADFITNR 306
>gi|425469791|ref|ZP_18848698.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
gi|389880334|emb|CCI38905.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
Length = 326
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 140/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 75 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 134
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++ T+T+NV P +++ I + VG G++ G+++++ S
Sbjct: 135 VFGEDIAILAGDGLLAYAFEYVVTQTRNVPPVQVLEVIARLGRTVGAAGLVGGQVLDLES 194
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 195 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 254
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A++L+ A EL+ +D A P
Sbjct: 255 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEP 313
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 314 LRAIAEYIVNR 324
>gi|390440821|ref|ZP_10229021.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
gi|389835867|emb|CCI33147.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
Length = 309
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 140/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T+NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 AGKPDISAETLGFIHTHKTGSLLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD N + K AG D +ATYP L G+ G+++ A++L+ A EL+ +D A P
Sbjct: 238 VLDITATNEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAIGELSGYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 55/293 (18%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ + K AL + A+P+I ++Y L G+R+ LC+A+CE++GG
Sbjct: 21 YLQKRKKLCETALDQ--AIPVIYPEKIYESMRYSLLAG--GKRLRPILCLAACEMIGGTI 76
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
S MP ACA EM+ T++L LL YA E
Sbjct: 77 SMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAFE 136
Query: 146 HMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRC 203
+AT+T +NVS +R+++ I + A+G G++ G++++++S+GK D+SL L+FI +
Sbjct: 137 FVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLETLNFIHNHKT 196
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDD- 258
L+EASVVCG ++ G S E++++L +Y + +GLA+Q+ DDILD + K AG D
Sbjct: 197 AALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQEQLGKTAGKDL 256
Query: 259 ---EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ TYP L G+ ++ A++LV A +EL F A PL LA ++ SR+
Sbjct: 257 IAKKVTYPSLWGIEESRSKAQQLVEAACKELETFGQL-AQPLNALAHYITSRN 308
>gi|422305087|ref|ZP_16392424.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
gi|389789644|emb|CCI14373.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
Length = 309
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A+ L+ A EL+ +D A P
Sbjct: 238 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|343469128|gb|AEM43805.1| geranylgeranyl diphosphate synthase [Castanea mollissima]
Length = 213
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 113/169 (66%), Gaps = 9/169 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL +A EH+A T V P R++ A+GE++ ++GT G++AG++++I S+G DV L L+
Sbjct: 42 ALLAFAFEHIAVSTVGVPPARVIGAVGELARSIGTEGLVAGQVVDICSEGLSDVGLEHLE 101
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
FI + L+EA+VV G ++GGGS E++EKLR + + +GL +QV DDILD K +E G
Sbjct: 102 FIHLHKTAALLEAAVVLGAILGGGSHEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELG 161
Query: 257 D--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
D+ TYPKLMG+ +K +A +L +A +L+ FDP +AAPL
Sbjct: 162 KTAGKDLVADKTTYPKLMGIEKSKEFADKLNKDAQDQLSGFDPEKAAPL 210
>gi|425436138|ref|ZP_18816577.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|425449068|ref|ZP_18828911.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
gi|389679196|emb|CCH92000.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|389764903|emb|CCI09068.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
Length = 309
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A+ L+ A EL+ +D A P
Sbjct: 238 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|443669312|ref|ZP_21134542.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330405|gb|ELS45123.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
Length = 309
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A+ L+ A EL+ +D A P
Sbjct: 238 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 141/255 (55%), Gaps = 44/255 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCIA+CEL+GG MP ACA EM+ T++L
Sbjct: 94 GKRIRPCLCIAACELMGGTMDVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHK 153
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL +A E++ +T K+V +R +R I ++ VG+ G++ G++++I
Sbjct: 154 VYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIM 213
Query: 185 SKGKD---VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
S+G + V++ L +I + G L+E SV G ++ G EED+E+L KY + +GLA+QV
Sbjct: 214 SEGAEAGEVTVETLQYIHAHKTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQV 273
Query: 242 WDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR 293
DDILD + K AG DE ATYP L+G+ +K+ A +L+A+A L +D +
Sbjct: 274 VDDILDCTQTSEQLGKTAGKDEAVGKATYPSLVGLEESKKIADKLIADAKDLLKDYDQEK 333
Query: 294 AAPLYHLADFLVSRH 308
AAPL LAD++ +R
Sbjct: 334 AAPLIGLADYIKNRQ 348
>gi|425441812|ref|ZP_18822079.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
gi|389717377|emb|CCH98522.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
Length = 326
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 75 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 134
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T NV P +++ I + VG G++ G+++++ S
Sbjct: 135 VFGEDIAILAGDGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 194
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 195 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 254
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A+ L+ A EL+ +D A P
Sbjct: 255 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEP 313
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 314 LRAIAEYIVNR 324
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
Length = 309
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 156/302 (51%), Gaps = 54/302 (17%)
Query: 55 NNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLC 106
N P + Y+ + ++ AL ++PL ++Y L G+R+ LC
Sbjct: 11 NGESPAFDLSTYLKERKAQVEAALDR--SLPLGYPEKIYEAMRYSLLAG--GKRLRPILC 66
Query: 107 IASCELVGGNESSVMPLACAAEMLVTLAL------------------------------- 135
+A+CEL+GG MP ACA EML T++L
Sbjct: 67 LATCELMGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAIL 126
Query: 136 -NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLS 193
LL YA E++AT+T+ V +R+++ I + VG G++ G+++++ S+GK D+
Sbjct: 127 AGDGLLAYAFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEE 186
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
L +I + G L+E VVCG ++ G ++ DIE+L +Y + +GLA+Q+ DDILD ++
Sbjct: 187 TLHYIHTHKTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQE 246
Query: 254 E----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E AG D +ATYP L G+ +K A+EL+ EA +L F R+ PL LA+F+
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGLEASKAKAQELIEEAIAQLEPFGE-RSQPLIALANFIT 305
Query: 306 SR 307
+R
Sbjct: 306 AR 307
>gi|354569185|ref|ZP_08988342.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
gi|353538935|gb|EHC08440.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
Length = 308
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ +C+A+CE+ GGN + MP ACA EM+ T++L
Sbjct: 57 GKRLRPIICLATCEMTGGNIAIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++A T++V +RL+R + + AVG G++ G+++++ S
Sbjct: 117 VYGEDIAILAGDGLLAYAFEYVAVNTEDVPAERLLRVVAHLGRAVGAAGLVGGQVLDLES 176
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+ LDFI + G L+EASVVCG ++ G SE+++++L Y K +GLA+Q+ DD
Sbjct: 177 EGKSDICSETLDFIHHHKTGALLEASVVCGGILAGTSEDNLKRLSCYAKNIGLAFQIIDD 236
Query: 245 ILDNMKKKKEAG-----DDEA---TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +++ G D +A TYP L G+ +++ A++L+ A EL F A P
Sbjct: 237 ILDITSTQEQLGKTVGKDQKAKKVTYPSLWGIEKSQKQAQQLIESACAELEPFGKA-AEP 295
Query: 297 LYHLADFLVSR 307
L LA F+ SR
Sbjct: 296 LVALAHFITSR 306
>gi|440753463|ref|ZP_20932666.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
gi|440177956|gb|ELP57229.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
Length = 309
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 EGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ G+++ A+ L+ A EL+ +D A P
Sbjct: 238 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|428222583|ref|YP_007106753.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
gi|427995923|gb|AFY74618.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
Length = 313
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 138/252 (54%), Gaps = 44/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG++S MP ACA EM+ T++L
Sbjct: 62 GKRLRPILCLATCELFGGDDSMSMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHK 121
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E +A T+NV DR++R + + AV G++ G+++++ S
Sbjct: 122 VYGEDIAVLAGDALLAYAFEFIADNTQNVPSDRILRVVSRLGRAVAAEGLVGGQVVDLES 181
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D +L L+FI R + L+EASVV G ++ G EDI++L Y + +GLA+Q+ DD
Sbjct: 182 EGKPDTTLETLNFIHRHKTAALLEASVVSGGILAGADTEDIKRLTIYAQNIGLAFQIIDD 241
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQEL-AYFDPTRAA 295
ILD +E AG D + TYP L+G+ ++ A+ L+ A ++ Y P A
Sbjct: 242 ILDITSTSEELGKTAGKDIIAQKVTYPSLLGIPESQIQAQNLIDLAKSQVQCYGSP--AI 299
Query: 296 PLYHLADFLVSR 307
PL +AD++++R
Sbjct: 300 PLMRIADYIIAR 311
>gi|425467096|ref|ZP_18846380.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
gi|389830220|emb|CCI27968.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
Length = 326
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 75 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 134
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T+NV P +++ I + VG G++ G+++++ S
Sbjct: 135 VFGEDIAILAGDGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 194
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 195 AGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDD 254
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ +++ A++L+ A EL+ +D A P
Sbjct: 255 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEA-AEP 313
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 314 LRAIAEYIVNR 324
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Moorea producens 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Moorea producens 3L]
Length = 309
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 55/308 (17%)
Query: 52 SNNNNPFPEIQIDEYMTLKAKKINKALFEGA---AVPLI--------LQYPTLPNHEGER 100
+ P P+ + L K KAL E A A+P + ++Y L G+R
Sbjct: 3 ATEGRPTPKRESPSLDLLTYLKERKALIESALDQALPRMEPDKIYEAMRYSLLAG--GKR 60
Query: 101 VHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------- 135
+ LC+A+CEL+GG MP +CA EM+ T++L
Sbjct: 61 LRPILCLATCELMGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFG 120
Query: 136 -------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK 188
LL YA E+ A +TKNV ++++ + ++ AVG G++ G+++++ S+GK
Sbjct: 121 EDIAILAGDGLLAYAFEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGK 180
Query: 189 -DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
D+ L FI + G L+EA VVCG ++ G + ++++L KY + +GLA+Q+ DDILD
Sbjct: 181 SDIKEETLSFIHTHKTGALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILD 240
Query: 248 NMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
++E AG D +ATYP L G+ +K A+ELV EA ++ F +A PL
Sbjct: 241 ITATQEELGKTAGKDIKAQKATYPSLWGLEASKAKAQELVNEAKAQIESFG-EKAQPLIA 299
Query: 300 LADFLVSR 307
+ADF+V+R
Sbjct: 300 IADFIVNR 307
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 139/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG+ +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T+NV P +++ I + VG G++ G+++++ S
Sbjct: 118 VFGEDIAILAGDGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
GK D+S L FI + G L+E SVV G ++ G EDI KL +Y + +GLA+Q+ DD
Sbjct: 178 AGKPDISAETLGFIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+E AG D +ATYP L G+ +++ A++L+ A EL+ +D A P
Sbjct: 238 VLDITATKEELGKTAGKDLQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEA-AEP 296
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 297 LRAIAEYIVNR 307
>gi|428305626|ref|YP_007142451.1| polyprenyl synthetase [Crinalium epipsammum PCC 9333]
gi|428247161|gb|AFZ12941.1| Polyprenyl synthetase [Crinalium epipsammum PCC 9333]
Length = 312
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 140/251 (55%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CE++GG + MP ACA EM+ T++L
Sbjct: 61 GKRLRPILCLATCEMLGGTTAMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHK 120
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL Y+ E++A T+ V +++++ I ++S AVG G++ G+++++
Sbjct: 121 VYGEDIAILAGDGLLAYSFEYIAKATQGVPAEQVLQVIAQLSHAVGATGLVGGQVVDLEC 180
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D S+ L +I + G L+E+ VVCG ++ S E ++KL +Y + +GLA+Q+ DD
Sbjct: 181 EGKSDTSVETLTYIHTHKTGALLESCVVCGAILASASAEVLQKLSRYAQNIGLAFQIVDD 240
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D +ATYP + G+ ++R A++LV EA ELA F + P
Sbjct: 241 ILDITATQEELGKTAGKDLQAQKATYPSIWGLDQSRRQAQKLVDEAKAELASFGE-KGRP 299
Query: 297 LYHLADFLVSR 307
L +ADF+ SR
Sbjct: 300 LMAIADFITSR 310
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 140/253 (55%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV LC+A+CE++GG MP ACA EM+ T++L
Sbjct: 57 GKRVRPILCLATCEMIGGTIGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL + E +AT+T + V PDR ++ I + SA G G++ G+++++
Sbjct: 117 VYGEDVAILAGDGLLALSFEFVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLA 176
Query: 185 SKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+G+ ++SL L+FI + L+EASVVCG +I G S +DI+KL Y + +GLA+Q+ D
Sbjct: 177 SEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIID 236
Query: 244 DILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K K AG D + TYP L G+ ++ A+ELV EA +L ++ +A
Sbjct: 237 DILDITATKEQLGKTAGKDIESAKVTYPSLWGIEESRLKAQELVEEACAQLDFYG-DKAV 295
Query: 296 PLYHLADFLVSRH 308
PL +A F+++R+
Sbjct: 296 PLQEIAHFIINRN 308
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 136/251 (54%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG MP ACA EM+ T++L
Sbjct: 56 GKRLRPILCLATCELMGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 115
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E +AT+T+NV P+++++ I + VG G++ G+++++ S
Sbjct: 116 VYGEDIAILAGDGLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLES 175
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D++ L FI + G L+E SV+ G ++ G + ED +L +Y + +GLA+Q+ DD
Sbjct: 176 EGKLDITAETLTFIHTHKTGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDD 235
Query: 245 ILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E G +ATYP L G+ +K A++LV EA +L + +A P
Sbjct: 236 ILDITSTQEELGKSIGKDVQAQKATYPSLWGIEESKAQAQKLVDEAIAQLVLYGE-KAEP 294
Query: 297 LYHLADFLVSR 307
+ +A F+VSR
Sbjct: 295 IRAIAQFIVSR 305
>gi|434403680|ref|YP_007146565.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
gi|428257935|gb|AFZ23885.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
Length = 309
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 164/312 (52%), Gaps = 58/312 (18%)
Query: 50 IKSNNNNPFPE---IQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEG 98
+ ++N PE + + Y+ + K N AL + ++P++ ++Y L G
Sbjct: 2 VATDNLQKTPEEAKLNLAAYLKERQKLCNTALDQ--SIPVVYPEKIYESMRYSLLAG--G 57
Query: 99 ERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------- 135
+R+ LC+A+CE++GG MP ACA EM+ T++L
Sbjct: 58 KRIRPILCLAACEMMGGTIDMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKV 117
Query: 136 ---------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL A E AT+T NV +R+++ I + A+G G++ G++++++S
Sbjct: 118 YGENIAILAGDGLLALAFEFPATQTPANVPHERVLQVIARLGKALGAAGLVGGQVVDLDS 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+SL L+FI + L+EASVVCG L+ G S EDI++L +Y + +GLA+Q+ DD
Sbjct: 178 EGKLDISLETLNFIHNHKTAALLEASVVCGGLLAGASSEDIQRLTRYAQSIGLAFQIIDD 237
Query: 245 ILDNM----KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K AG D + TYP L G+ ++ A +LV A ELA F +A P
Sbjct: 238 ILDITATLEQLGKTAGKDLTAKKVTYPSLWGIEESRSKATQLVEAACAELAPFGE-KALP 296
Query: 297 LYHLADFLVSRH 308
L +A ++VSR+
Sbjct: 297 LQAIAHYIVSRN 308
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 141/253 (55%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV LC+A+CE++GG MP ACA EM+ T++L
Sbjct: 57 GKRVRPILCLATCEMIGGTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL + + +AT+T + V P+R +R I + SA G G++ G+++++
Sbjct: 117 VYGEDVAILAGDGLLALSFQLVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLA 176
Query: 185 SKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+G+ ++SL L+FI + L+EASVVCG +I G + +DI+KL +Y + +GLA+Q+ D
Sbjct: 177 SEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIID 236
Query: 244 DILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K K AG D + TYP L G+ ++ A+ELV EA +L ++ +A
Sbjct: 237 DILDITATKEQLGKTAGKDIESAKVTYPSLWGIEESRLKAQELVEEACAQLDFYG-DKAV 295
Query: 296 PLYHLADFLVSRH 308
PL +A F+++R+
Sbjct: 296 PLQEIAHFIINRN 308
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 115/172 (66%), Gaps = 9/172 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL ++ EH+A T V P R+VRAI E++ ++GT G++AG++++I S+G DV L L+
Sbjct: 43 ALLSFSFEHLAVATVGVDPSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLE 102
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
FI + L+EA+VV G ++GGG++E+IEKLRK+ + +GL +QV DDILD K +E G
Sbjct: 103 FIHVHKTAALLEAAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELG 162
Query: 257 D--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
++ TYPKLMG+ ++ A++L +A ++L FD +AAPL L
Sbjct: 163 KTAGKDLVAEKVTYPKLMGIEKSRELAEKLNKDAQEQLRDFDEEKAAPLMAL 214
>gi|443323350|ref|ZP_21052357.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786914|gb|ELR96640.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 309
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 138/251 (54%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLATCELMGGTSVIALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++AT+T+ V P+RL++ I +S AVG G++ G+++++ S
Sbjct: 118 VYGDDIAILAGDGLLAYAFEYVATQTQGVPPERLIKVIIHLSHAVGAEGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+S L FI + G L+EA V+ G + G + ED+E+L KY + +GLA+Q+ DD
Sbjct: 178 EGKTDISAETLTFIHTHKTGALLEACVLSGADLAGANREDLERLSKYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +E AG D + TYP L G+ ++ A++LV A +L + +A P
Sbjct: 238 ILDITATVEELGKTAGKDLKAQKVTYPSLWGIEASQTQAQQLVEGAIAQLTVYGE-KADP 296
Query: 297 LYHLADFLVSR 307
L +A ++V+R
Sbjct: 297 LRAIASYIVTR 307
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 135/255 (52%), Gaps = 43/255 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG+ + MP A A EM+ T++L
Sbjct: 61 GKRLRPILCLAACELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHK 120
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V +RL++ + E+S G G++ G+++++ S
Sbjct: 121 VYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLES 180
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK V L L++I + G L+ A V+ G LI G I+ LR Y + +GLA+Q+ DDI
Sbjct: 181 EGKQVDLETLEYIHLHKTGALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDI 240
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPT---RA 294
LD K AG D+ TYPKL+G+ +++ AK LV EA LA F PT +A
Sbjct: 241 LDVTASSDVLGKTAGKDLIADKTTYPKLLGLEESRQRAKALVEEAKASLAAFKPTEPAKA 300
Query: 295 APLYHLADFLVSRHK 309
+PL LAD+++ R +
Sbjct: 301 SPLLALADYVIGRDR 315
>gi|427418987|ref|ZP_18909170.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
gi|425761700|gb|EKV02553.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
Length = 302
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 50/295 (16%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAV--PLI----LQYPTLPNHEGERVHGTLCIASCELV 113
+ ++ Y+ K + AL + AV P I ++Y + G+R+ LC+A+CELV
Sbjct: 9 DFDLNSYLATKGADVEAALDQSLAVVYPEIIYESMRYSVMAG--GKRLRPILCLATCELV 66
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GG + MP ACA EM+ T++L ALL
Sbjct: 67 GGTSAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAGDALLA 126
Query: 142 YAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKR 200
YA E +A +T++V ++ I + AVG G++ G+I+++ S+GK D S+ L+FI
Sbjct: 127 YAFEFIADRTEDVPATAVLDVIRRLGHAVGAAGLVGGQIVDLASEGKPDTSIETLNFIHI 186
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--- 257
+ L+E SVV G ++ G + IE+L +Y + +GLA+Q+ DD+LD ++E G
Sbjct: 187 HKTAALLEVSVVSGAVLAGADNDTIERLSRYAQNIGLAFQIVDDVLDVTSTQEELGKSIG 246
Query: 258 -----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ATYP + G+ +++ A EL+ A +EL F P + PL +ADF+ +R
Sbjct: 247 KDIQAQKATYPSIWGLDESRKKADELIQAAKEELEPFGPLK-RPLVAIADFITAR 300
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 134/253 (52%), Gaps = 41/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG MP A A EM+ T++L
Sbjct: 69 GKRLRPILCLAACELAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHK 128
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V P+RL+ +GE+S A G G++ G+++++
Sbjct: 129 VYGEANAILAGDALLTRAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLEC 188
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK V L L++I + G L+ A V+CG LI G + + LR Y + +GLA+Q+ DDI
Sbjct: 189 EGKTVDLDTLEYIHLHKTGALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDI 248
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP-TRAAP 296
LD K AG D+ TYPKL+G+ +++ A+ LV EA + LA F RAAP
Sbjct: 249 LDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRQRAQALVLEAKEALAPFAAGGRAAP 308
Query: 297 LYHLADFLVSRHK 309
L LAD++ SR +
Sbjct: 309 LLALADYITSRDR 321
>gi|428777168|ref|YP_007168955.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
gi|428691447|gb|AFZ44741.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
Length = 307
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 154/294 (52%), Gaps = 50/294 (17%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCIASCELVG 114
+D Y+ + + KAL + V P I ++Y L G+R+ LC+A+CELVG
Sbjct: 15 FDLDSYLQARKAIVEKALDQSLRVGEPPQIYEAMRYSLLAG--GKRLRPILCLATCELVG 72
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
G+ MP ACA EM+ T++L LL Y
Sbjct: 73 GSIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKFGEDIAILAGDGLLAY 132
Query: 143 AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRL 201
A E++AT T+ V P +++ + ++ AVG G++ G+++++ S+G D++L L++I
Sbjct: 133 AFEYIATYTQGVEPAAVLKVVSKLGHAVGATGLVGGQVVDLASEGNPDINLETLNYIHTH 192
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD---- 257
+ G L+EA VV G ++GG +EED+ +L +Y +GLA+Q+ DDILD ++E G
Sbjct: 193 KTGALLEACVVSGAILGGATEEDLGRLSRYAYDIGLAFQIVDDILDITATQEELGKTAGK 252
Query: 258 ----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ATYP+L+G+ +K A EL A ELA + + A L +A + +R
Sbjct: 253 DLEADKATYPRLLGLEASKAKADELTEAACAELASYGDS-AMALQAIAQLIANR 305
>gi|443311531|ref|ZP_21041158.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
gi|442778410|gb|ELR88676.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
Length = 308
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+C++ GG + MP ACA EM+ T++L
Sbjct: 57 GKRLRPILCLATCQMAGGTLETAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E +AT T NV +++++ I ++ AVG G++ G+++++ S
Sbjct: 117 VYGEDIAILAGDGLLAYAFEFVATNTFNVPAEQVLKVIAKLGRAVGAAGLVGGQVVDLES 176
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK DVSL L+FI + L+EASVVCG ++ G SEED+++L + + +GLA+Q+ DD
Sbjct: 177 EGKTDVSLETLNFIHNHKTAALLEASVVCGGILAGMSEEDLQRLSGFSQNIGLAFQIIDD 236
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD + K AG D + TYP L G+ + A++L+A A +L F +A P
Sbjct: 237 VLDITSTQEQLGKTAGKDLQAQKVTYPSLWGIEESLHQARQLIAAAIAQLEPFGD-KATP 295
Query: 297 LYHLADFLVSR 307
L +A ++ SR
Sbjct: 296 LKAIAHYITSR 306
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 57/306 (18%)
Query: 56 NP-FPEIQIDEYMTLKAKKI-NKALFEGA---AVPLI--------LQYPTLPNHEGERVH 102
NP P+ QID L + KAL E A ++ ++ ++Y L G+R+
Sbjct: 12 NPMLPQFQIDTTFDLSNYLVERKALVEKALDNSIKIVYPEKIYEAMRYSLLAG--GKRLR 69
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------------- 135
LC+A+CEL GGN MP ACA EM+ T++L
Sbjct: 70 PILCLATCELSGGNIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGED 129
Query: 136 -----NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KD 189
LL YA E + T+TKNV P ++++ I + A G G++ G+++++ S+G
Sbjct: 130 IAILAGDGLLSYAFEFVVTQTKNVLPKQVLQVIARLGKASGAAGLVGGQVVDLASEGISQ 189
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
VS L FI + G L+EASVVCG ++ S+ ++ +L +Y + +GLA+Q+ DDILD
Sbjct: 190 VSEKTLHFIHTHKTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDIT 249
Query: 250 KKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
+E AG D +ATYP + G+ ++ A++LV +A EL F + PL LA
Sbjct: 250 ATTEELGKTAGKDIEAKKATYPVIWGLEKSRFQAQKLVEKAKAELEVFGD-KVMPLIALA 308
Query: 302 DFLVSR 307
DF++SR
Sbjct: 309 DFIISR 314
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 137/252 (54%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG+ + MP A A EM+ T++L
Sbjct: 59 GKRLRPILCLAACELAGGDAAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHK 118
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V P+RL++ +GE+S G G++ G+++++ S
Sbjct: 119 VYGEAVAILAGDALLTRAFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLES 178
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L+ A V+ G +IGG +E I LR Y + +GLA+Q+ DDI
Sbjct: 179 EGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDI 238
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ +++ A +LV EA L + ++A PL
Sbjct: 239 LDITASSEVLGKTAGKDLIADKTTYPKLLGLEESRKRAADLVQEAKGVLKPW-ASKAQPL 297
Query: 298 YHLADFLVSRHK 309
LAD++ SR +
Sbjct: 298 LALADYITSRDR 309
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 136/253 (53%), Gaps = 46/253 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ +CEL+GG +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLTTCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E++AT+T+NV L+ I + VG G++ G+++++ S
Sbjct: 118 VYGEDIAILAGDALLSYAFEYVATQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK DV++ L FI + G L+E SVV G ++ G +ED+E+L +Y + +GLA+Q+ DD
Sbjct: 178 EGKLDVTVDTLKFIHIHKTGALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRA 294
ILD +E G D +ATYP L G+ +++ A+ L+ +A +A DP A
Sbjct: 238 ILDVTASTEELGKTAGKDQRDKKATYPSLWGLEESQKQAQALIDDA---IAQVDPYGQSA 294
Query: 295 APLYHLADFLVSR 307
PL +A F+V+R
Sbjct: 295 QPLKAIAQFIVAR 307
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 153/314 (48%), Gaps = 57/314 (18%)
Query: 44 QAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYP-TLPNHEGERV- 101
Q + +++ P + D Y+ K K ++ ++ A+P + P TL HE R
Sbjct: 15 QYRRIATSASSTKP-NKFDYDLYVKSKFKAVSISIQH--ALPPPFKRPETLQLHEAMRYA 71
Query: 102 --HGTL-----CIASCELVGGNESSVMPLACAAEMLVT---------------------- 132
G L CIA+CELVGG++ MP ACA EM+ T
Sbjct: 72 LSQGRLMCAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPT 131
Query: 133 ----------LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI-- 180
L ALL EH+A + D R +GE+S AVG+ G+LAG+
Sbjct: 132 VHCAFGIPTALFAGTALLVLGFEHLAAHYRG---DTAARMVGEVSRAVGSTGLLAGQAVD 188
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQ 240
M I + G+ V L L+F+ + L+EAS+V G + GG S++DIE LR YG+ GL YQ
Sbjct: 189 MGIQNAGRAVELETLEFVHLHKTSALLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQ 248
Query: 241 VWDDILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPT 292
+ DDI D K +E AG D ++TY ++GV ++ +L+ EA + L F+ T
Sbjct: 249 IVDDIADATKTTEELGKVAGQDAMTGKSTYSTILGVDKSREIVGQLLVEAKERLGVFEET 308
Query: 293 RAAPLYHLADFLVS 306
+A PL HL D V+
Sbjct: 309 KALPLIHLMDHFVN 322
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354555029|ref|ZP_08974332.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|353553183|gb|EHC22576.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 136/251 (54%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ +CEL+GG +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLTTCELMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E++AT+T+NV L+ I + VG G++ G+++++ S
Sbjct: 118 VYGEDIAILAGDALLSYAFEYVATQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ DV++ L FI + G L+E SVV G ++ G EDIE+L +Y + +GLA+Q+ DD
Sbjct: 178 EGRADVTVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +E G D +ATYP L G+ +++ A+ L+ +A +L+ + + A P
Sbjct: 238 ILDVTASTEELGKTAGKDQRDQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQS-AQP 296
Query: 297 LYHLADFLVSR 307
L +A F+V+R
Sbjct: 297 LTAIAQFIVAR 307
>gi|428177866|gb|EKX46744.1| hypothetical protein GUITHDRAFT_157722 [Guillardia theta CCMP2712]
Length = 303
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 138/251 (54%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+CE++GG E MP A AAEM+ T++L
Sbjct: 52 GKRIRPILTLAACEMMGGTEEMAMPTALAAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 111
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL Y+ E++A TK V+P+R++ I VG G++ G++++I S
Sbjct: 112 VFGDDIAVLAGDGLLSYSFEYIARYTKGVAPERVLDVIARCGKCVGALGLVGGQVVDIQS 171
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK DV++ L +I + L+E VV G ++GG +EE I++L K+ +GL++Q+ DD
Sbjct: 172 EGKKDVTIETLQWIHEHKTAALLEFCVVGGGILGGANEEQIQRLSKFAMNIGLSFQIIDD 231
Query: 245 ILDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K AG D+ATYPKLMG+ +K A+ L+AEA +L + +AAP
Sbjct: 232 ILDVTQDSATLGKTAGKDLLVDKATYPKLMGLEKSKERAEALIAEAKDQLKPW-GDKAAP 290
Query: 297 LYHLADFLVSR 307
L LADF+ +R
Sbjct: 291 LMALADFITAR 301
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 133/251 (52%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG MP ACA EM+ T++L
Sbjct: 56 GKRLRPILCLATCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHK 115
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++ +TKNV + L++ + + AV G++ G+++++
Sbjct: 116 VYGEDIAILAGDGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLEC 175
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ D+ L L FI + G L+EASVV G L+ G E D+ +L +Y +GLA+Q+ DD
Sbjct: 176 EGQPDIGLETLHFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDD 235
Query: 245 ILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K G D A TYP+L G+ +++ A+ LVAEA ELA + A P
Sbjct: 236 ILDITSTRDVLGKTVGKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGAA-AVP 294
Query: 297 LYHLADFLVSR 307
L +AD++ SR
Sbjct: 295 LQAIADYITSR 305
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 138/252 (54%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+ G + +P A A EM+ T++L
Sbjct: 50 GKRLRPILCLAACELIAGESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ +S +RL++ +GE+S G G++ G++ ++
Sbjct: 110 VYGDALAILAGDALLTRAFEMVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLEC 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GKDV + L++I + G L++ASVVCG LIGG ++ ++ LR Y + +GLA+Q+ DDI
Sbjct: 170 EGKDVDIDTLEYIHIHKTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDI 229
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+GV +++ AK L+ +A L ++ A PL
Sbjct: 230 LDVTSSSEVLGKTAGKDLIADKTTYPKLLGVDESRQRAKVLIEKAKSVLEPWEDD-ATPL 288
Query: 298 YHLADFLVSRHK 309
LAD+++SR +
Sbjct: 289 LALADYIISRDR 300
>gi|440682769|ref|YP_007157564.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
gi|428679888|gb|AFZ58654.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
Length = 309
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 55/293 (18%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ + K + AL + A+P++ ++Y L G+RV LC+A+ E++GG
Sbjct: 21 YLKERQKLCDTALDQ--AIPVVYPEKIYEAMRYSLLAG--GKRVRPILCLATSEMIGGTI 76
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
MP ACA EM+ T++L LL A E
Sbjct: 77 EMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLALAFE 136
Query: 146 HMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRC 203
+AT+T +NV +R ++ I + A+G G++ G++++++S+GK D+SL L+FI +
Sbjct: 137 FVATQTPQNVPRERALQVIARLGKALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHKT 196
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDD- 258
L+EA VVCG +I G S ED+EKL +Y + +GLA+Q+ DDILD + K AG D
Sbjct: 197 AALLEACVVCGGVIAGASAEDVEKLTRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDL 256
Query: 259 ---EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ TYP L G+ ++ A++LV A ELA F +A PL +A ++VSR+
Sbjct: 257 KAEKVTYPSLWGIDESRAKAQQLVESACVELASFGE-KALPLQAIAHYIVSRN 308
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 133/251 (52%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG MP ACA EM+ T++L
Sbjct: 56 GKRLRPILCLATCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHK 115
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++ +TKNV + L++ + + AV G++ G+++++
Sbjct: 116 VYGEDIAILAGDGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLEC 175
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ D+ L L FI + G L+EASVV G L+ G E D+ +L +Y +GLA+Q+ DD
Sbjct: 176 EGQPDIGLETLHFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDD 235
Query: 245 ILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K G D A TYP+L G+ +++ A+ LVAEA ELA + A P
Sbjct: 236 ILDITSTRDVLGKTVGKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGAA-AVP 294
Query: 297 LYHLADFLVSR 307
L +AD++ SR
Sbjct: 295 LQAIADYITSR 305
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 143/271 (52%), Gaps = 55/271 (20%)
Query: 85 PLI---LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------ 135
PLI ++Y L EG+R+ LC+ASCEL GG + +P ACA EM+ T++L
Sbjct: 36 PLIYESMRYSLLA--EGKRLRPILCLASCELAGGTAAIALPTACALEMVHTMSLIHDDLP 93
Query: 136 --------------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSA 169
ALL YA E +A T V DR+++ I ++ A
Sbjct: 94 SMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAFEAIARHTPEVPADRVLKVIAALARA 153
Query: 170 VGTRGVLAGRIMEINSKGKD-VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
VG G++ G+++++ S+G+D V+L L +I + G L+E SVV G ++ G SEE E+L
Sbjct: 154 VGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKTGALLEVSVVSGAILAGASEELQEQL 213
Query: 229 RKYGKCVGLAYQVWDDILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVA 280
R Y + +GLA+QV DDILD +E AG D +ATYP L+G+ ++ YA +L+
Sbjct: 214 RTYAQKIGLAFQVIDDILDITATAEELGKTAGKDLAAKKATYPSLLGLDASREYADQLIT 273
Query: 281 E----ANQELAYFDPTRAAPLYHLADFLVSR 307
E A DP RA +AD++ +R
Sbjct: 274 EAKAAIAAFGAEADPLRA-----IADYITAR 299
>gi|427730885|ref|YP_007077122.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
gi|427366804|gb|AFY49525.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
Length = 309
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 141/253 (55%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CE++GG MP ACA EM+ T++L
Sbjct: 57 GKRLRPILCLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA E +AT+T ++V+ +R+++ I + A+G G++ G++++++
Sbjct: 117 VYGEDIAILAGDGLLAYAFELVATQTPESVTRERVLQVIARLGRALGAAGLVGGQVVDLD 176
Query: 185 SKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+GK D+SL L+FI + L+EA VVCG ++ G S ED+++L +Y + +GLA+Q+ D
Sbjct: 177 SEGKSDISLETLNFIHNHKTAALLEACVVCGGILAGASSEDVQRLSRYAQNIGLAFQIID 236
Query: 244 DILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K AG D + TYP L G+ ++ A+EL+ A EL F + A
Sbjct: 237 DILDVTATQEQLGKTAGKDLVAQKVTYPSLWGLEKSRAKAQELIEAACAELEPFGQS-AQ 295
Query: 296 PLYHLADFLVSRH 308
PL LA F+ SR+
Sbjct: 296 PLQALAHFITSRN 308
>gi|427717935|ref|YP_007065929.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
gi|427350371|gb|AFY33095.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
Length = 309
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 58/312 (18%)
Query: 50 IKSNNNNPFPE---IQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEG 98
+ +N PE + Y+ + K AL + A+P+I ++Y L G
Sbjct: 2 VATNKFTKTPETATFNLSAYLKERQKLCETALDQ--AIPIIYPEKIYESMRYSLLAG--G 57
Query: 99 ERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------- 135
+RV LC+A+CE+ GG MP ACA EM+ T++L
Sbjct: 58 KRVRPILCLATCEMTGGTIDMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKV 117
Query: 136 ---------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL +A E +A +T ++V DR++ + + A+G G++ G+++++ S
Sbjct: 118 YGEDVAILAGDGLLAFAFEFVAKQTPQDVPRDRVLDVVARLGRALGAAGLVGGQVVDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D SL L+FI + L+EASVVCG ++ G S ED+++L +Y + +GLA+Q+ DD
Sbjct: 178 EGKSDTSLETLNFIHNHKTAALLEASVVCGGILTGASSEDVQRLTRYAQNIGLAFQIVDD 237
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K AG D + TYP L G+ ++ A+ELV EA EL F + A P
Sbjct: 238 ILDITATQEQLGKTAGKDLKAQKVTYPSLWGIEESRAKAQELVEEACVELESFGES-AQP 296
Query: 297 LYHLADFLVSRH 308
L +A ++ SR+
Sbjct: 297 LKAIAYYITSRN 308
>gi|428300108|ref|YP_007138414.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
gi|428236652|gb|AFZ02442.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
Length = 308
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 136/253 (53%), Gaps = 42/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L IA+CE+ GG MP ACA EM+ T++L
Sbjct: 57 GKRLRPILTIATCEMTGGTIEMAMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++ TK+V +R+++ I + AVG G++ G+++++ S
Sbjct: 117 VYGEDIAILAGDGLLAYAFEYIVEHTKDVPAERVLKVISRLGRAVGAAGLVGGQVVDLES 176
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D SL L+FI + L+EA VVCG ++ G SE+D+++L +Y + +GLA+Q+ DD
Sbjct: 177 EGKTDTSLETLNFIHNHKTAALLEACVVCGGILAGVSEDDLQRLSRYSQNIGLAFQIIDD 236
Query: 245 ILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K AG D A TYP L G+ ++ A +LVA+A QEL F +A P
Sbjct: 237 ILDITSTQEQLGKTAGKDLASQKVTYPSLWGIEESRNKANQLVADACQELEPFGE-KAQP 295
Query: 297 LYHLADFLVSRHK 309
L +A ++ R +
Sbjct: 296 LMVIAHYITQRDR 308
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 10/189 (5%)
Query: 130 LVTLALNRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
L AL A EH+A + V DR +RA+ E+ SA GT GV AG++ + S+G
Sbjct: 30 FTALLAGDALHALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEG 89
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
VSL+ L++I + +L+EA+ V G ++GGG++ ++E++R+Y +CVGL +QV DD+LD
Sbjct: 90 LPVSLAMLEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLD 149
Query: 248 NMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
++ G D+ATYPKL+GV A+ YA +L+A A EL FD RAAPL H
Sbjct: 150 MTSTSEQLGKTAGKDVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRH 209
Query: 300 LADFLVSRH 308
LA F+ R
Sbjct: 210 LARFIAYRQ 218
>gi|443314084|ref|ZP_21043676.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442786319|gb|ELR96067.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 306
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 55/304 (18%)
Query: 54 NNNPFPE-IQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGT 104
+ + P+ + Y++ + K++ AL A++PL ++Y L G+R+
Sbjct: 6 STDTLPQSFDLKTYLSDRQKRVEAAL--DASLPLAYPETIYEAMRYSLLAG--GKRLRPI 61
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
LC+A+CEL+GG + MP ACA EM+ T++L
Sbjct: 62 LCLAACELMGGTTAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDVA 121
Query: 136 ---NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVS 191
ALL YA EH+A T +V DR++R I ++ AVG G++ G+I+++ S+G +V+
Sbjct: 122 ILAGDALLTYAFEHIARYTTDVPADRVLRVIADLGRAVGAEGLVGGQIVDLASEGDLEVT 181
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK 251
+ L++I + G L+E SV G ++ G E I L Y + +GLA+Q+ DD+LD
Sbjct: 182 VDTLNYIHVHKTGALLELSVTSGAILAGAGETAIATLSGYAQRIGLAFQIVDDVLDITAT 241
Query: 252 KKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
+E AG D +ATYP G+ ++R A++L+ EA + +APL LAD+
Sbjct: 242 SEELGKSAGKDLQAQKATYPSFWGIDESRRQAQQLIDEAKAAVLPLG-ADSAPLLALADY 300
Query: 304 LVSR 307
+V+R
Sbjct: 301 IVAR 304
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 155/288 (53%), Gaps = 32/288 (11%)
Query: 30 NPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQ 89
P+A V + S +A +K+ F +YM +A I+ AL + +VPL Q
Sbjct: 37 RPRA--VAEVSVRSEAGGAAVKAKTAFDF-----QQYMKERATLIDAALDK--SVPL--Q 85
Query: 90 YPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMAT 149
YP + N L+ G E + LA + ALL + E++A
Sbjct: 86 YPEIINES----------MRYSLLAGRRGKPTNHKVYGEEIAILAGD-ALLSLSFEYIAR 134
Query: 150 KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG--KDVSLSELDFIKRLRCGKLI 207
+T+ V+ DR+++ I E+ AVG+ G++AG+ ++I S+G + V L L +I + L+
Sbjct: 135 ETRGVAADRVLQVIVEVGKAVGSEGLVAGQAVDIKSEGAGESVGLDTLQYIHEHKTAVLL 194
Query: 208 EASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDDEA--- 260
EA+VV G ++GG +E D+++LRKY + +GLA+QV DDILD +E AG D A
Sbjct: 195 EAAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATTEELGKTAGKDLASAK 254
Query: 261 -TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYP L+G+ ++ A EL+ EA L +DP RAAPLY LA+++ R
Sbjct: 255 TTYPSLVGLERSREIADELIEEAKSMLTTYDPARAAPLYALAEYIRCR 302
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 43/261 (16%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+R+ LC+ SC + GG+ MP ACA EM+ T++L
Sbjct: 37 MRYSLLAG--GKRLRPILCLTSCRMSGGSADLAMPTACALEMVHTMSLIHDDLPAMDDDD 94
Query: 136 --------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
ALL YA + +A KT P+R+V +G + A G+
Sbjct: 95 YRRGKLTNHKVYGEDMAILAGDALLAYAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGL 154
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCV 235
+ G+++++ S+G+ ++L L++I + G L+E SV+ G ++ G +E+L +Y +C+
Sbjct: 155 VGGQVVDLESEGRTITLETLEYIHTHKTGALLEVSVISGAILAGADGGVVERLTRYSRCI 214
Query: 236 GLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
GLA+Q+ DD+LD + E G D +ATYP L+G GA+ A++L +A ELA
Sbjct: 215 GLAFQIRDDLLDITATQAELGKTAGKDLRDRKATYPSLLGYDGARDRAEQLREQAVAELA 274
Query: 288 YFDPTRAAPLYHLADFLVSRH 308
F + A PL LA+F+V R
Sbjct: 275 DFGAS-ARPLTALAEFIVQRR 294
>gi|414076496|ref|YP_006995814.1| geranyltranstransferase [Anabaena sp. 90]
gi|413969912|gb|AFW94001.1| geranyltranstransferase [Anabaena sp. 90]
Length = 312
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 138/253 (54%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV LC+A+ +++GG M ACA EM+ T++L
Sbjct: 60 GKRVRPILCLATADMIGGTIEMAMATACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 119
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL A EH+A +T NV DR+++ I + A+G G++ G+++++
Sbjct: 120 VYGEDVAILAGDGLLALAFEHVAAQTPTNVPRDRVLQVIIRLGKALGAAGLVGGQVVDLE 179
Query: 185 SKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+GK D+SL L+FI + L+EA VVCG +I G S ED++KL +Y + +GLA+Q+ D
Sbjct: 180 SEGKSDISLETLNFIHNHKTAALLEACVVCGGIIAGASAEDVQKLTRYSQNIGLAFQIID 239
Query: 244 DILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K AG D + TYP L G+ ++ A+ LVA+A ELA + +A
Sbjct: 240 DILDITATQEQLGKTAGKDLTAQKVTYPSLWGIEESRAKAQHLVAQACAELASYGE-KAI 298
Query: 296 PLYHLADFLVSRH 308
PL LA F+++R+
Sbjct: 299 PLQALAHFIINRN 311
>gi|428780839|ref|YP_007172625.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428695118|gb|AFZ51268.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 305
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 152/295 (51%), Gaps = 52/295 (17%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAV---PLI---LQYPTLPNHEGERVHGTLCIASCELVG 114
++ Y+ + I KAL + + P+I ++Y L G+R+ LC+A+CELVG
Sbjct: 13 FDLESYLQARKAIIEKALDQSLPIAEPPVIYEAMRYSLLAG--GKRLRPILCLATCELVG 70
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
G MP ACA EM+ T++L LL Y
Sbjct: 71 GTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKKYGEDIAILAGDGLLAY 130
Query: 143 AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRL 201
A E++A +T+ V+P ++R I ++ VG G++ G+++++ S+G D+SL L++I
Sbjct: 131 AFEYVAAQTQGVNPSSVLRVIAKLGHTVGATGLVGGQVLDLASEGNPDISLETLNYIHTH 190
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD---- 257
+ G L+EA VV G ++G SEE + L +Y +GLA+Q+ DDILD ++E G
Sbjct: 191 KTGALLEACVVTGAILGEASEETLAALSRYAYNIGLAFQIIDDILDITATQEELGKTAGK 250
Query: 258 ----DEATYPKLMGVAGAKRYAKELVAEANQELA-YFDPTRAAPLYHLADFLVSR 307
D+ATYP+L+G+ +K A EL+ A E++ Y D PL +A + +R
Sbjct: 251 DVEADKATYPRLLGLEASKAKADELIEAACAEMSPYGDA--GVPLKAIAQLIANR 303
>gi|352093628|ref|ZP_08954799.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
gi|351679968|gb|EHA63100.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
Length = 312
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 135/252 (53%), Gaps = 45/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CELVGG+ MP A A EM+ T++L
Sbjct: 62 GKRLRPILCLAACELVGGSPELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 121
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
A+L A E +A ++ NV +RL+R +GE++ G G++ G+++++ S
Sbjct: 122 VYGDAMAILAGDAMLSRAFEMVAVRSANVPAERLLRVVGELALVSGAPGLVGGQVVDLES 181
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ V L L++I + L+ A VV G LIGG S++ ++ +R Y +GLA+Q+ DDI
Sbjct: 182 EGQAVDLETLEYIHLHKTAALLRACVVTGALIGGASDQQLQAMRTYANGIGLAFQIIDDI 241
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR--AA 295
LD K AG D+ TYPKL+G+ ++ A +LV E+ A DP R AA
Sbjct: 242 LDVTASSEVLGKTAGKDLLADKTTYPKLLGLEASREKALQLVRESK---AALDPWRDKAA 298
Query: 296 PLYHLADFLVSR 307
PL LAD++ SR
Sbjct: 299 PLLALADYVASR 310
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 140/252 (55%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL G + + + A A EM+ T++L
Sbjct: 50 GKRLRPILCLAACELTGSDSENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ NV DRL++ +GE+S G G++ G++ ++ S
Sbjct: 110 VYGEAIAILAGDALLTRAFEMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLES 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK V L L+FI + G L++ASVVCG LIGG E+ + L Y K +GLA+Q+ DDI
Sbjct: 170 EGKAVDLDTLEFIHIHKTGALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDI 229
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D++TYPKL+G+ +++ AKEL+ + ++++ + +AAPL
Sbjct: 230 LDVTASSEVLGKTAGKDLLADKSTYPKLLGLDESRKKAKELIRK-SKDVIHPWSDKAAPL 288
Query: 298 YHLADFLVSRHK 309
LAD++++R +
Sbjct: 289 LSLADYIINRDR 300
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG + +P A A EM+ T++L
Sbjct: 46 GKRLRPILCLAACELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V +RL++ +GE+S G G++ G+++++ S
Sbjct: 106 VYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLES 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L+ A V+ G +IGG E I+ LR Y + +GLA+Q+ DDI
Sbjct: 166 EGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDI 225
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ ++R A LV EA + L + +A PL
Sbjct: 226 LDITASSEVLGKTAGKDLIADKTTYPKLLGLDESRRRADALVNEAKESLQPW-AEKAVPL 284
Query: 298 YHLADFLVSRHK 309
LADF+ SR +
Sbjct: 285 LALADFITSRDR 296
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 137/252 (54%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG +P A A EM+ T++L
Sbjct: 49 GKRLRPILCLAACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHK 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ +T+ + +RL++ IGE+S A G G++ G++++++
Sbjct: 109 VYGDAVAILAGDALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDC 168
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L++A V CG LIGG E+ +E L Y + +GLA+Q+ DDI
Sbjct: 169 EGKEVDLETLEYIHLHKTGALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDI 228
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ ++R A LVA+A L + P ++ PL
Sbjct: 229 LDVTASSEVLGKTAGKDLIADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPL 287
Query: 298 YHLADFLVSRHK 309
LAD++ SR +
Sbjct: 288 LALADYITSRDR 299
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 135/253 (53%), Gaps = 41/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG+ + MP A A EM+ T++L
Sbjct: 60 GKRLRPILCLAACELAGGDAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHK 119
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V ++L++ +GE+S A G G++ G+++++
Sbjct: 120 VYGEANAILAGDALLTRAFEMVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLEC 179
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GKDV L L++I + G L+ + V+ G LI G SE + L Y + +GLA+Q+ DDI
Sbjct: 180 EGKDVDLETLEYIHLHKTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDI 239
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPT-RAAP 296
LD K AG D+ TYPKL+G+ +++ A LVAEA Q L F+ AAP
Sbjct: 240 LDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRQRADALVAEAKQALEPFNSNGSAAP 299
Query: 297 LYHLADFLVSRHK 309
L LAD++ SR +
Sbjct: 300 LLALADYITSRDR 312
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 135/251 (53%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ +CEL+GG +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLTTCELMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA EH+AT+T NVS LV I + VG G++ G+++++ S
Sbjct: 118 VYGEDIAILAGDALLSYAFEHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK +++ L FI + G L+E SVV G ++ G + EDIE+L Y + +GLA+Q+ DD
Sbjct: 178 EGKSNITSDILKFIHVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + E AG D +ATYP L G+ +++ A+ L+ +A +LA + A P
Sbjct: 238 ILDITSTQAELGKTAGKDKQAQKATYPSLWGLEESQKQAQILIEDAIAQLAPY-GREAYP 296
Query: 297 LYHLADFLVSR 307
L +A F+VSR
Sbjct: 297 LEAIARFIVSR 307
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 134/255 (52%), Gaps = 45/255 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG+ + MP A A EM+ T++L
Sbjct: 61 GKRLRPILCLAACELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 120
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ V +RL++ + E+S G G++ G+++++
Sbjct: 121 VYGDAVAILAGDALLTRAFEMVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLEC 180
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GKDV L L++I + G L++A V+ G LIGG E ++ LR Y + +GLA+Q+ DDI
Sbjct: 181 EGKDVDLDTLEYIHLHKTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDI 240
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP-----T 292
LD K AG D+ TYPKL+G+ ++ AK L+ EA L F P
Sbjct: 241 LDVTASSDVLGKTAGKDLIADKTTYPKLLGLEESRLRAKGLIQEAKTSLDAFKPVGGGSV 300
Query: 293 RAAPLYHLADFLVSR 307
+AAPL LAD+++ R
Sbjct: 301 QAAPLLALADYVIGR 315
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 136/252 (53%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG +P A A EM+ T++L
Sbjct: 49 GKRLRPILCLAACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHK 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ +T+ + +RL++ IGE+S A G G++ G++++++
Sbjct: 109 VYGDAVAILAGDALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDC 168
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L++A V CG LIGG E+ ++ L Y + +GLA+Q+ DDI
Sbjct: 169 EGKEVDLETLEYIHLHKTGALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDI 228
Query: 246 LDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + G D+ TYPKL+G+ ++R A LVA+A L + P ++ PL
Sbjct: 229 LDVTASSEVLGKTAGKDLIADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPL 287
Query: 298 YHLADFLVSRHK 309
LAD++ SR +
Sbjct: 288 LALADYITSRDR 299
>gi|427706110|ref|YP_007048487.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
gi|427358615|gb|AFY41337.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
Length = 309
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 140/253 (55%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV LC+A+CE++GG MP ACA EM+ T++L
Sbjct: 57 GKRVRPILCLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGRLTNHK 116
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL +A E +AT+T +NV D++++ I + A+G G++ G+++++
Sbjct: 117 VYGDDIAILAGDGLLAFAFELVATQTPENVPRDKVLQVIARLGRALGAAGLVGGQVVDLE 176
Query: 185 SKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+GK D+SL L+FI + L+EA VVCG ++ G S ED+++L +Y + +GLA+Q+ D
Sbjct: 177 SEGKSDISLETLNFIHNHKTAALLEACVVCGGILAGASSEDVQRLTRYSQNIGLAFQIID 236
Query: 244 DILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K AG D + TYP L G+ ++ A++L+ A EL + + A
Sbjct: 237 DILDVTATQEQLGKTAGKDLLAKKVTYPSLWGIEESRAKAQQLIESACAELEPYG-SLAQ 295
Query: 296 PLYHLADFLVSRH 308
PL +A F+V+R+
Sbjct: 296 PLKAVAHFIVNRN 308
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 45/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CELVGG+ MP A A EM+ T++L
Sbjct: 62 GKRLRPILCLAACELVGGSSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 121
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
A+L A E +A ++ NV DRL+R +GE++ G G++ G+++++ S
Sbjct: 122 VYGDAMAILAGDAMLSRAFEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLES 181
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ V L L++I + L+ A VV G LIGG +++ ++ +R Y +GLA+Q+ DDI
Sbjct: 182 EGQAVDLETLEYIHLHKTAALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDI 241
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR--AA 295
LD K AG D+ TYPKL+G+ ++ A +LV E+ A +P R AA
Sbjct: 242 LDVTASSEVLGKTAGKDLLADKTTYPKLLGLDASREKALQLVRESK---AALEPWRDKAA 298
Query: 296 PLYHLADFLVSR 307
PL LAD++ SR
Sbjct: 299 PLLALADYVASR 310
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 135/254 (53%), Gaps = 45/254 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CELVGG+ S MP A A EM+ T++L
Sbjct: 62 GKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 121
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A +++ V P+RL++ + E+S G G++ G+++++ S
Sbjct: 122 VYGDAMAILAGDALLSRAFEMVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLES 181
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G++V L L++I + L+ A VV G LIGG ++ +R Y +GLA+Q+ DDI
Sbjct: 182 EGREVDLETLEYIHLHKTAALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDI 241
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAA 295
LD K AG D+ TYPKL+G+ ++ A ELVA+A A +P +A
Sbjct: 242 LDVTASSDVLGKTAGKDLIADKTTYPKLLGLEPSRARALELVAQAK---AVLEPWKDKAQ 298
Query: 296 PLYHLADFLVSRHK 309
PL LAD++ SR +
Sbjct: 299 PLLALADYVASRDR 312
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 135/251 (53%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ +CEL+GG +P ACA EM+ T++L
Sbjct: 58 GKRLRPILCLTTCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E++AT+T NV L+ I + VG G++ G+++++ S
Sbjct: 118 VYGEDIAILAGDALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLES 177
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ DV++ L FI + G L+E SVV G ++ G EDIE+L +Y + +GLA+Q+ DD
Sbjct: 178 EGRTDVTVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDD 237
Query: 245 ILDNMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD +E AG DE ATYP L G+ +++ A+ L+ +A +L+ + A P
Sbjct: 238 VLDVTASSEELGKTAGKDERAQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQA-AQP 296
Query: 297 LYHLADFLVSR 307
L +A F+V+R
Sbjct: 297 LEAIAQFIVAR 307
>gi|416403979|ref|ZP_11687631.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
gi|357261577|gb|EHJ10825.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 135/251 (53%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ +CEL+GG +P ACA EM+ T++L
Sbjct: 56 GKRLRPILCLTTCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 115
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E++AT+T NV L+ I + VG G++ G+++++ S
Sbjct: 116 VYGEDIAILAGDALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLES 175
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ DV++ L FI + G L+E SVV G ++ G EDIE+L +Y + +GLA+Q+ DD
Sbjct: 176 EGRTDVTVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDD 235
Query: 245 ILDNMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD +E AG DE ATYP L G+ +++ A+ L+ +A +L+ + A P
Sbjct: 236 VLDVTASSEELGKTAGKDERAQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQA-AQP 294
Query: 297 LYHLADFLVSR 307
L +A F+V+R
Sbjct: 295 LEAIAQFIVAR 305
>gi|443477457|ref|ZP_21067303.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
gi|443017422|gb|ELS31868.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
Length = 307
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 50/303 (16%)
Query: 52 SNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL------ILQYPTLPNHEGERVHGTL 105
S ++P +D+Y+ +++ AL +V ++Y + G+R+ L
Sbjct: 6 SETSSPTVAFNLDKYLRDLKQEVEAALDASISVTYPEKIYESMRYSLMAG--GKRLRPIL 63
Query: 106 CIASCELVGGNESSVMPLACAAEMLVTLAL------------------------------ 135
C+A+ EL+GG+ ++ MP ACA EM+ T++L
Sbjct: 64 CLAAHELLGGDLAAAMPTACAMEMVHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGDDIAI 123
Query: 136 --NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSL 192
ALL YA E +A +TK V +R+++AI + AV G++ G+++++ +GK DV+
Sbjct: 124 LAGDALLAYAFEFIAVQTKGVPAERILKAIAHLGHAVAATGLVGGQVVDLECEGKSDVTA 183
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----N 248
L FI + L+E+ V+CG L+ G ++ DI++L Y +GLA+Q+ DDILD +
Sbjct: 184 EILTFIHIHKTAALLESCVICGALLAGANDTDIKRLSTYANNIGLAFQIIDDILDITATS 243
Query: 249 MKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFL 304
+ K AG D A TYP L G+ ++ A+ELV +A +L + A PL LAD++
Sbjct: 244 EQLGKTAGKDLAAQKVTYPSLWGIEASQLKAQELVEQAKAQLVSYGDA-ALPLMALADYI 302
Query: 305 VSR 307
+R
Sbjct: 303 TAR 305
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 136/252 (53%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG + +P A A EM+ T++L
Sbjct: 50 GKRLRPILCLAACELAGGEVALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V +RL++ +GE+S A G G++ G+++++ S
Sbjct: 110 VYGDAQAILAGDALLTRAFEMVALRSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLES 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GKDV L+ L++I + G L++A V+ G +I G E ++ LR Y + +GLA+Q+ DDI
Sbjct: 170 EGKDVDLATLEYIHLHKTGALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDI 229
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ +++ A LVAEA L + + A PL
Sbjct: 230 LDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRQRADALVAEAKAALQPWQAS-AQPL 288
Query: 298 YHLADFLVSRHK 309
LAD++ SR +
Sbjct: 289 LALADYITSRDR 300
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 134/252 (53%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG + +P A A EM+ T++L
Sbjct: 46 GKRLRPILCLAACELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ +V +RL++ +GE+S G G++ G+++++ S
Sbjct: 106 VYGEAVAILAGDALLTRAFEMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLES 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L+ A V+ G +IGG E I+ LR Y + +GLA+Q+ DDI
Sbjct: 166 EGKEVDLETLEYIHLHKTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDI 225
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ ++R A LV A + L + +A PL
Sbjct: 226 LDITASSDVLGKTAGKDLIADKTTYPKLLGLDESRRRADALVNAAKEALQPW-AEKAIPL 284
Query: 298 YHLADFLVSRHK 309
LADF+ SR +
Sbjct: 285 LALADFITSRDR 296
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 134/252 (53%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CELVGG+ S MP A A EM+ T++L
Sbjct: 65 GKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 124
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ V P+RL++ + E++ G G++ G+++++ S
Sbjct: 125 VYGDAMAILAGDALLSRAFEMVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLES 184
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G++V L L++I + L+ A VV G LIGG +E +R Y +GLA+Q+ DDI
Sbjct: 185 EGREVDLETLEYIHLHKTAALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDI 244
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ ++ A ELVA+A L + ++A PL
Sbjct: 245 LDVTASSEVLGKTAGKDLIADKTTYPKLLGLEPSRARALELVAQAKSALEPWT-SKAQPL 303
Query: 298 YHLADFLVSRHK 309
LAD++ SR +
Sbjct: 304 LALADYVASRDR 315
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 133/251 (52%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCIA+CE+ GG++ MP A A EM+ T++L
Sbjct: 88 GKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHV 147
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
+LL + EH+A +TK VS +++V I + +VG G+ G++M++
Sbjct: 148 VFGEDVAILAGDSLLSTSFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLEC 207
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+ K +L +L +I + L++ +V G ++GG + E++ + +GLA+QV DD
Sbjct: 208 EAKPGTTLDDLKWIHIHKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADD 267
Query: 245 ILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K AG DEA TYPKL+G+ +K YA++L+ EA + LA F RAAP
Sbjct: 268 ILDVTASSEDLGKTAGKDEATDKTTYPKLLGLEESKAYARQLIDEAKESLAPFGD-RAAP 326
Query: 297 LYHLADFLVSR 307
L +ADF++ R
Sbjct: 327 LLAIADFIIDR 337
>gi|407957152|dbj|BAM50392.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 319
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCI +CEL GG+E+ +P ACA EM+ T++L
Sbjct: 68 GKRLRPILCITACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHK 127
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++ T T P L++ I + VG G++ G+++++ S
Sbjct: 128 VYGEDIAILAGDGLLAYAFEYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLES 187
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ D++ L FI + G L+EASV+ G ++ G + E ++L +Y + +GLA+QV DD
Sbjct: 188 EGRTDITPETLTFIHTHKTGALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDD 247
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D +ATYP L+G+ ++ A+ L+ +A L F P+ A P
Sbjct: 248 ILDITATQEELGKTAGKDVKAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFGPS-AEP 306
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 307 LQAIAEYIVAR 317
>gi|428772609|ref|YP_007164397.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
gi|428686888|gb|AFZ46748.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
Length = 294
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 151/296 (51%), Gaps = 54/296 (18%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
+ Y+ K K + K+L E ++P+ ++Y L G+R+ LC+A+CEL
Sbjct: 2 FDLQSYLKEKQKLVEKSLDE--SLPMGKPEKIYESMRYSLLAG--GKRLRPILCLATCEL 57
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
+GG + +P ACA EM+ T++L LL
Sbjct: 58 MGGTDEMALPSACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLL 117
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIK 199
YA E++A +TK V + ++ I ++ AVG G++ G++M++ +GK DV+ L FI
Sbjct: 118 TYAFEYVARETKGVPAENVLEVIKILTKAVGAEGLVGGQVMDLECEGKTDVTAEMLSFIH 177
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD-- 257
+ G L+EA V G ++ G ++ED+ +L Y K +GLA+Q+ DDILD +E G
Sbjct: 178 IHKTGALLEACVTSGAVLAGATQEDLSRLSIYAKNIGLAFQIIDDILDVTATTEELGKTA 237
Query: 258 ------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ATYPKL G+ +K A EL+ A +L + +A L LA+F+VSR
Sbjct: 238 GKDLSADKATYPKLWGLEESKAKADELIESAIAQLEVYGE-KAQSLKALAEFIVSR 292
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 135/253 (53%), Gaps = 41/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG+ + MP A A EM+ T++L
Sbjct: 58 GKRLRPILCLAACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHK 117
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V ++L++ +GE+S A G G++ G+++++
Sbjct: 118 VYGEANAILAGDALLTRAFEMVALRSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLEC 177
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L+ A V+ G LI G + +E LR Y + +GLA+Q+ DDI
Sbjct: 178 EGKNVDLETLEYIHLHKTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDI 237
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDP-TRAAP 296
LD K AG D+ TYPKL+G+ +++ A LVAEA L + +AAP
Sbjct: 238 LDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESRKRADALVAEAKAALEPWSAGGKAAP 297
Query: 297 LYHLADFLVSRHK 309
L LAD++ SR +
Sbjct: 298 LLALADYITSRDR 310
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383321022|ref|YP_005381875.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324192|ref|YP_005385045.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490076|ref|YP_005407752.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435342|ref|YP_005650066.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451813441|ref|YP_007449893.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|339272374|dbj|BAK48861.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|359270341|dbj|BAL27860.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273512|dbj|BAL31030.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276682|dbj|BAL34199.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779410|gb|AGF50379.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCI +CEL GG+E+ +P ACA EM+ T++L
Sbjct: 51 GKRLRPILCITACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHK 110
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++ T T P L++ I + VG G++ G+++++ S
Sbjct: 111 VYGEDIAILAGDGLLAYAFEYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLES 170
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ D++ L FI + G L+EASV+ G ++ G + E ++L +Y + +GLA+QV DD
Sbjct: 171 EGRTDITPETLTFIHTHKTGALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDD 230
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D +ATYP L+G+ ++ A+ L+ +A L F P+ A P
Sbjct: 231 ILDITATQEELGKTAGKDVKAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFGPS-AEP 289
Query: 297 LYHLADFLVSR 307
L +A+++V+R
Sbjct: 290 LQAIAEYIVAR 300
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 128/239 (53%), Gaps = 36/239 (15%)
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
+CIA+CE VGG++ +P ACA EM+ T +L
Sbjct: 127 MCIAACEAVGGSKQQALPTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMA 186
Query: 136 ---NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-VS 191
AL E++ + T +V PDR+V+ I +I+ VG++G++ G+ M++ S G +
Sbjct: 187 VLAGDALFPLGFEYIVSSTSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFD 246
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK 251
S ++FI + G + E S V G +IGG ++E++E+LR YG+ VG+ YQ+ DDIL+
Sbjct: 247 PSLVEFIHERKFGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDILEEEAL 306
Query: 252 KKEAG---DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ G ++ +YP+ G+ A+ A+ L + A EL+ FD ++APLY D+ + R
Sbjct: 307 LEGNGVIRKNKTSYPRAYGLEKAREIAETLRSNAKMELSGFDRGKSAPLYSFVDYAIDR 365
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 151/296 (51%), Gaps = 52/296 (17%)
Query: 61 IQIDEYMTLKAKKINKALF----EGAAVPLIL----QYPTLPNHEGERVHGTLCIASCEL 112
+ + EY+ K + +++AL +G +P L +Y G+RV L +A+CE
Sbjct: 1 MDLKEYLKQKCQLVDQALERYLPDGKELPASLHGAMRYSVFAG--GKRVRPVLMLAACEA 58
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG+ +VMP ACA EM+ T +L ALL
Sbjct: 59 VGGSPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALL 118
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIK 199
A ++ + P +R I EI+ A G+RG++ G+++++ S+G+ DV L+ L +I
Sbjct: 119 TEAFILLSANGEGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYIH 178
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEA 255
+ G LI ASV G ++GG SEE + L +Y +GLA+Q+ DDILD + K+A
Sbjct: 179 THKTGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKDA 238
Query: 256 GDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D+ ATYP LMG+ +K A+ELV A L FD RA PL +A ++V R
Sbjct: 239 GSDQARGKATYPALMGLEASKARARELVQIALDALEPFD-LRAEPLRAIASYIVKR 293
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 135/252 (53%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASCEL GG+ S +P A A EM+ T++L
Sbjct: 50 GKRLRPILCLASCELAGGDASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ +V +RL++ IGE+S A G G++ G+I+++ S
Sbjct: 110 VYGDATAILAGDALLTRAFEMVALRSPDVPAERLLKVIGELSLAAGAPGLVGGQIVDLAS 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G +V L L++I + G L++ASV+ G LI G + +E LR Y + +GLA+Q+ DDI
Sbjct: 170 EGVEVDLDTLEYIHLHKTGALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDI 229
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ +K A+ LV EA L + +A PL
Sbjct: 230 LDVTASSEVLGKTAGKDLTADKTTYPKLLGLEESKARAESLVKEACGVLNPW-SDKAQPL 288
Query: 298 YHLADFLVSRHK 309
LA ++ SR +
Sbjct: 289 LALAGYITSRDR 300
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 58/308 (18%)
Query: 52 SNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHG 103
+N ++P + Y++ ++ ++ A+ AA+P++ ++Y L G+R+
Sbjct: 4 TNLDSP-STFDLKSYLSDRSCQVEAAI--DAALPVVYPEQIYEAMRYSLLAG--GKRLRP 58
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------------- 135
LC+A+CE++G + + MP ACA EM+ T++L
Sbjct: 59 ILCLATCEMLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGV 118
Query: 136 ----NRALLCYAVEHMATKTKNVS----PDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
ALL YA EH+AT+T S P +++ + ++ AVG G++ G+++++ S+G
Sbjct: 119 AVLAGDALLTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEG 178
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
V L FI + L+E SV G ++ G SE +++LR+Y + +GLA+Q+ DD+LD
Sbjct: 179 TLVDEETLTFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLD 238
Query: 248 NMKK----KKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
K G D +ATYP L G+ ++R A++LVA+A EL+ F A PL
Sbjct: 239 ITSTPETLGKSIGKDIAAQKATYPSLWGLEESQRKAEQLVADAISELSEFGEG-AQPLVA 297
Query: 300 LADFLVSR 307
+A F+ +R
Sbjct: 298 IAQFITAR 305
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 153/293 (52%), Gaps = 55/293 (18%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ + K AL E A+P+I ++Y L G+R+ LC+A+ E++GG
Sbjct: 21 YLKERQKLCEAALDE--AIPVIYPEKIYESMRYSLLAG--GKRLRPILCLATSEMMGGTI 76
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
MP ACA EM+ T++L LL YA E
Sbjct: 77 EIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGLLAYAFE 136
Query: 146 HMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRC 203
+A +T ++V DR+++ + + A+G G++ G++++++S+GK D+SL L+FI +
Sbjct: 137 FVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHKT 196
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDD- 258
L+EA VVCG ++ G S ED+++L +Y + +GLA+Q+ DDILD + K AG D
Sbjct: 197 AALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDL 256
Query: 259 ---EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ TYP L G+ ++ A++L+ A EL F A PL +A F+ SR+
Sbjct: 257 LAKKVTYPSLWGIEQSRVKAQQLIEAACAELEPFGED-AQPLKAIAHFITSRN 308
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 132/252 (52%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG+ +P A A EM+ T++L
Sbjct: 46 GKRLRPILCLAACELAGGDAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V D+L++ +GE+S G G++ G+++++ S
Sbjct: 106 VYGEAVAILAGDALLTRAFEMVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLES 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK V L L++I + G L+ A V+ G LIG + I LR Y + +GLA+Q+ DDI
Sbjct: 166 EGKQVDLETLEYIHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDI 225
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ +++ A +LV EA + L + +A PL
Sbjct: 226 LDITASSEVLGKTAGKDLLADKTTYPKLLGLEESRKRADDLVREAKEALQPW-SDQAMPL 284
Query: 298 YHLADFLVSRHK 309
LADF+ SR +
Sbjct: 285 LALADFITSRDR 296
>gi|428769681|ref|YP_007161471.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
gi|428683960|gb|AFZ53427.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
Length = 325
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 159/307 (51%), Gaps = 57/307 (18%)
Query: 50 IKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERV 101
IK N ++PF + Y+ K + + KAL + ++P+ ++Y L G+R+
Sbjct: 25 IKPNIDSPF---NLKVYLQEKKEIVEKALDD--SLPIEKPEKIYEAMRYSLLAG--GKRL 77
Query: 102 HGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------------- 135
LC+A EL+G E MP ACA EM+ T++L
Sbjct: 78 RPILCLAVAELLGQTEDVAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGE 137
Query: 136 ------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK- 188
LL YA E +A KT + +R+V+ + + AVG G++ G+++++ +GK
Sbjct: 138 DIAILAGDGLLAYAFEFVAIKTSCIPSERIVKVLAILGKAVGANGLVGGQVLDLECEGKA 197
Query: 189 DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDN 248
DV+ L FI R + G L+EA V G ++ G SE+D+ +L Y + +GLA+Q+ DDILD
Sbjct: 198 DVTADTLSFIHRRKTGALLEACVSSGAVLAGASEDDLARLSVYAQNIGLAFQIVDDILDV 257
Query: 249 MKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
+E AG D +ATYP++ G+ +++ A+EL+ A +L + +A PL +
Sbjct: 258 TATSEELGKTAGKDISAQKATYPRIWGLDTSRQKAEELIKNAIAQLDIY-GDKAQPLRAI 316
Query: 301 ADFLVSR 307
A+++++R
Sbjct: 317 AEYIINR 323
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 131/252 (51%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG +P A A EM+ T++L
Sbjct: 46 GKRLRPILCLAACELAGGEAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V +RL++ +GE+S G G++ G+++++ S
Sbjct: 106 VYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLES 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK V L L++I + G L+ A V+ G LIG + I LR Y + +GLA+Q+ DDI
Sbjct: 166 EGKQVDLETLEYIHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDI 225
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K AG D+ TYPKL+G+ +++ A +LV EA + L + +A PL
Sbjct: 226 LDITASSEVLGKTAGKDLLADKTTYPKLLGLEESRKRADDLVREAKEALQPWSE-QAMPL 284
Query: 298 YHLADFLVSRHK 309
LADF+ SR +
Sbjct: 285 LALADFITSRDR 296
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 150/293 (51%), Gaps = 55/293 (18%)
Query: 66 YMTLKAKKINKALFEGAAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNE 117
Y+ + K + AL A+P+I ++Y L G+RV LC+A+CE++GG
Sbjct: 22 YLKERQKLCDNAL--DRAIPIIYPEKIYEAMRYSLLAG--GKRVRPILCLATCEMMGGTI 77
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
MP ACA EM+ T++L LL A E
Sbjct: 78 EMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALAFE 137
Query: 146 HMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRC 203
+A KT NV+ + ++ I + A+G G++ G+++++ +GK D+SL L+FI R +
Sbjct: 138 LVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLETLNFIHRHKT 197
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE 259
L+EA VV G +I G S ED+++L +Y + +GLA+Q+ DDILD K K AG D+
Sbjct: 198 SALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITSTKEQLGKTAGKDQ 257
Query: 260 ----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
TYP L G+ ++ A+ELV A EL F RA PL +A F+ SR+
Sbjct: 258 KAKKVTYPSLWGLEESRLKAQELVKVACAELEPFGD-RAKPLQAIAHFITSRN 309
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 146/277 (52%), Gaps = 53/277 (19%)
Query: 82 AAVPLI--------LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL 133
AA+P+I ++Y L G+R+ LC+A+ E++GG MP ACA EM+ T+
Sbjct: 35 AAIPIIYPEKIYESMRYSLLAG--GKRLRPILCLATSEMMGGTIEIAMPTACAVEMIHTM 92
Query: 134 AL--------------------------------NRALLCYAVEHMATKT-KNVSPDRLV 160
+L LL YA E +A +T ++V DR++
Sbjct: 93 SLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFEFVAIRTPESVPRDRVL 152
Query: 161 RAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
+ + + A+G G++ G++++++S+GK D SL L+FI + L+EA VVCG ++ G
Sbjct: 153 QVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHKTAALLEACVVCGGILAG 212
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDD----EATYPKLMGVAGA 271
S E++++L +Y + +GLA+Q+ DDILD + K AG D + TYP L G+ +
Sbjct: 213 ASSENVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDLLAKKVTYPSLWGIEQS 272
Query: 272 KRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ A++L+ A EL F A PL +A F+ SR+
Sbjct: 273 RVKAQQLIEAACTELEPFGED-AQPLKAIAHFITSRN 308
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 40/229 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL GG + +P A A EM+ T++L
Sbjct: 56 GKRLRPILCLAACELAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 115
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL + E +A ++ V P+RL++ +GE+S G G++ G+++++
Sbjct: 116 VYGDAVAILAGDALLTRSFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLEC 175
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L+FI + G L+ A V+CG LIGG ++ I+ LR Y + +GLA+Q+ DDI
Sbjct: 176 EGKEVDLETLEFIHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDI 235
Query: 246 LDNMKKK----KEAGD----DEATYPKLMGVAGAKRYAKELVAEANQEL 286
LD K AG D+ TYPKL+G+ ++R A+ LV+EA L
Sbjct: 236 LDVTASSDVLGKTAGKDLLADKTTYPKLLGLDESRRRAELLVSEAKAAL 284
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 122/247 (49%), Gaps = 45/247 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G R CIA+CELVGG + MP ACA EM+
Sbjct: 12 GRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSELRHGKPTVHR 71
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L ALL EH+A + S D R + E+S A+G+ G+LAG+ +++
Sbjct: 72 AFGIPTALFAGTALLALGFEHLAAR---YSGDTAARMVAEVSRAIGSTGLLAGQAVDLGI 128
Query: 186 KGKD--VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ D V L L+F+ + L+EAS+V G + GG SE++IE LR YG+ GL YQ+ D
Sbjct: 129 ENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVTGLLYQIVD 188
Query: 244 DILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+ D K +E G ++TY ++GV ++ EL+ EA + L F+ T+A
Sbjct: 189 DVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGELLVEAKERLGVFEETKAL 248
Query: 296 PLYHLAD 302
PL HLA+
Sbjct: 249 PLIHLAN 255
>gi|452824591|gb|EME31593.1| geranylgeranyl pyrophosphate synthetase [Galdieria sulphuraria]
Length = 370
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 141/251 (56%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCIA+CEL GG+ + P A A EM+ T++L
Sbjct: 119 GKRIRPMLCIATCELFGGSTLTATPTAVALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 178
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E++A +T+ V + +++ I + ++VG G++ G++++I S
Sbjct: 179 VFGEDIAILAGDALLARAFEYIANETQGVPAEVVLKVISFLGASVGYSGIVGGQVVDILS 238
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK +VS+ +L +I + + G L++ VV G L+GG EED+ ++ ++ + +GLA+QV DD
Sbjct: 239 EGKKEVSIDDLIWIHKHKTGALLKCCVVTGALLGGAKEEDVIRVGEFAERIGLAFQVADD 298
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +E G D+AT+P+LMG+ +KR+A++LV E+ + + RA
Sbjct: 299 ILDVTASFEELGKSIGKDERSDKATFPRLMGLEESKRFAEKLVQESKYLIEPYG-KRAYY 357
Query: 297 LYHLADFLVSR 307
L LAD++VSR
Sbjct: 358 LEALADYIVSR 368
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 130/252 (51%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A CE+VGGN + ACA EM+ T +L
Sbjct: 44 GKRLRPILCMAGCEVVGGNYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWY 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ N DR ++ I EIS A G G++ G+ ++++
Sbjct: 104 KFDEATAILAGDALLNRAFEVLSQW--NFDCDRKIKVIEEISKASGMLGMVLGQQCDMDA 161
Query: 186 KG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G KDV+L EL FI R + G+LI ASVV G + GGGSEE+I L+KYG +GLA+Q+ DD
Sbjct: 162 EGRKDVTLEELLFIHRHKTGRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDD 221
Query: 245 ILDNM----KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD + K K G D + T+ GV GAKR A+E + +A L F +
Sbjct: 222 VLDVIGDQNKIGKNVGSDLEKGKVTFVTFFGVDGAKRKAREEIEKAISALELFPAKKNEL 281
Query: 297 LYHLADFLVSRH 308
L LA F+V R
Sbjct: 282 LKKLAHFIVERE 293
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 121/247 (48%), Gaps = 45/247 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G R CIA+CELVGG + MP ACA EM+
Sbjct: 12 GRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSELRHGKPTVHR 71
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L ALL EH+A + S D R + E+ A+G+ G+LAG+ +++
Sbjct: 72 AFGIPTALFAGTALLALGFEHLAAR---YSGDTAARMVAEVGRAIGSTGLLAGQAVDLGI 128
Query: 186 KGKD--VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ D V L L+F+ + L+EAS+V G + GG SE++IE LR YG+ GL YQ+ D
Sbjct: 129 ENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVTGLLYQIVD 188
Query: 244 DILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+ D K +E G ++TY ++GV ++ +L+ EA + L F+ T+A
Sbjct: 189 DVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGQLLVEAKERLGVFEETKAL 248
Query: 296 PLYHLAD 302
PL HLAD
Sbjct: 249 PLIHLAD 255
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 151/296 (51%), Gaps = 52/296 (17%)
Query: 61 IQIDEYMTLKAKKINKALFE----GAAVPLIL----QYPTLPNHEGERVHGTLCIASCEL 112
+ + +Y+ K + +++AL G +P L +Y G+RV L +A+CE
Sbjct: 1 MDLKQYLKQKCELVDQALERFLPHGKELPASLHGSMRYSVFAG--GKRVRPVLLLAACEA 58
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGG +S +P ACA EM+ T +L ALL
Sbjct: 59 VGGELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALL 118
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIK 199
A ++ + + P +R I EI+ A G+RG++ G+++++ S+GK D+ ++ L +I
Sbjct: 119 TEAFILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIH 178
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEA 255
+ G LI ASV G ++GG +EE + L +Y +GLA+Q+ DD+LD + K+A
Sbjct: 179 THKTGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDA 238
Query: 256 GDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D+ ATYP L+G+ +KR A+ELV A L FD RA PL +A ++V R
Sbjct: 239 GSDQARGKATYPALVGLEASKRRAEELVQIALNALEPFD-ERAEPLRAIASYIVKR 293
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 56/310 (18%)
Query: 48 LTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAA--------VPLILQYPTLPNHEGE 99
+T++S F +++Y+ K I KAL E + ++Y + G+
Sbjct: 32 VTLQSTAATDF---DLNQYIADKLPLIEKALDESVVSTEKETEKIVEAMKYSLMAG--GK 86
Query: 100 RVHGTLCIASCELVG-GNESSVMPLACAAEMLVTLAL----------------------- 135
R+ LC+A+CE+ G+ + MP A + EM+ T++L
Sbjct: 87 RIRPVLCLAACEMFNDGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVI 146
Query: 136 ---------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
ALL + H+A +TK V+ DR++ + + +VG +G+ G++M++ +
Sbjct: 147 YGEDVAILAGDALLSDSFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECE 206
Query: 187 GK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
GK +L +L +I + L++ +V G +IGG S E+++ ++ +GLA+QV DDI
Sbjct: 207 GKGSATLEDLRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDI 266
Query: 246 LDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + +E G D+ TYPKL+G+ GA+ A+ LVAEA + L F RA L
Sbjct: 267 LDVTQSTEELGKTAGKDEDTDKTTYPKLLGLDGAREEAERLVAEAKKSLEPFGD-RATAL 325
Query: 298 YHLADFLVSR 307
LADF+++R
Sbjct: 326 LALADFIINR 335
>gi|374639389|gb|AEZ55683.1| geranylgeranyl diphosphate synthase 3 [Salvia miltiorrhiza]
Length = 379
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 139/254 (54%), Gaps = 42/254 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV +C+A+C LVGG +++ MP ACA EM+ ++L
Sbjct: 126 GKRVCPIVCLAACRLVGGEDAAAMPSACALEMIHAMSLIHDDLPCMDDDDLRRGRPSNHK 185
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL+ A EH+AT T+ V +R +R IGE++ +G GV+AG+++++ S
Sbjct: 186 VFGEPAAVLAGYALIASAFEHIATATEGVPAERTLRVIGEVARLIGAEGVVAGQVVDLRS 245
Query: 186 KG--KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
G DV L +L++I + +EA+ V G ++GG EE+I +R Y + GL +QV D
Sbjct: 246 GGGGDDVGLEKLEYIHVHKTAAAVEAAAVAGAVLGGACEEEIGNVRIYARRAGLMFQVVD 305
Query: 244 DILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD K +E AG D +ATYPKL+GV ++ A+ L EA ++L F+ RAA
Sbjct: 306 DVLDVTKSTEELGKTAGKDVATGKATYPKLIGVEKSREVAENLKREAQEQLLGFERGRAA 365
Query: 296 PLYHLADFLVSRHK 309
PL L DF+ R K
Sbjct: 366 PLMALLDFIAYRDK 379
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 139/253 (54%), Gaps = 47/253 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CE++GG + M ACA EM+ T++L
Sbjct: 52 GKRLRPILCLAACEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHK 111
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E++A +T +V +RL++ I + AVG G++ G+++++ S
Sbjct: 112 VYGEDIAILAGDALLSYAFEYVA-RTPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLES 170
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK DV++ L+FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DD
Sbjct: 171 EGKTDVAVETLNFIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDD 230
Query: 245 ILDNMKKKKEAG-----DDEA---TYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRA 294
ILD +E G D EA TYP L G+ ++ A++LVAEA +A +P +A
Sbjct: 231 ILDITATAEELGKTAGKDLEAQKVTYPSLWGIEKSQAEAQKLVAEA---IASLEPYGEKA 287
Query: 295 APLYHLADFLVSR 307
PL LA+++V+R
Sbjct: 288 NPLKALAEYIVNR 300
>gi|222055717|ref|YP_002538079.1| polyprenyl synthetase [Geobacter daltonii FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter daltonii FRC-32]
Length = 297
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 134/253 (52%), Gaps = 44/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ L +A+CE VGGN S MP ACA EM+ T +L N
Sbjct: 44 GKRIRPILMLAACEAVGGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHK 103
Query: 139 LLCYAVEHMA---------------TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
+ AV +A V P LV+ I EIS G+RG++ G+++++
Sbjct: 104 VFGEAVAILAGDALLTEAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDM 163
Query: 184 NSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
S+G ++ L+ + +I + G LI+ASV G L+GG S +D E L +YG+ +GLA+Q+
Sbjct: 164 ESEGNAEIDLATVQYIHTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIA 223
Query: 243 DDILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K+AG DE ATYP +MG+A AK A ELV A L+ FD +A
Sbjct: 224 DDILDIEGTTEEIGKDAGSDEARGKATYPAVMGLAEAKIRAAELVDIALDALSAFDG-KA 282
Query: 295 APLYHLADFLVSR 307
PL +A ++V R
Sbjct: 283 DPLREIASYIVKR 295
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 130/251 (51%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L +A+CE VGG +P ACA EM+ T +L
Sbjct: 44 GKRVRPVLLLAACEAVGGALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A ++ + V P +R I EI+ A G+RG++ G+++++ S
Sbjct: 104 VYGEATAILAGDALLTEAFILLSGNGEGVDPAARLRVIHEIAHASGSRGMVGGQMVDMES 163
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK D+ ++ L +I + G LI ASV G ++GG EE + L +Y +GLA+Q+ DD
Sbjct: 164 EGKHDIDMATLSYIHTHKTGALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADD 223
Query: 245 ILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD + K+AG D+ ATYP L+G+ +KR A+ELV A L FD RA P
Sbjct: 224 VLDVEGTTEELGKDAGSDQARGKATYPALVGLEASKRRAEELVQIALTALEPFD-ERAEP 282
Query: 297 LYHLADFLVSR 307
L +A ++V R
Sbjct: 283 LRAIASYIVKR 293
>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 222
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 118/176 (67%), Gaps = 12/176 (6%)
Query: 145 EHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD---VSLSELDFIKR 200
EHM + V+P+R++RA+ E++ A+GT G++AG+++++ S+ + V L L+FI
Sbjct: 46 EHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 105
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AG 256
+ L+EA+ V GV++GGG+EE+IEKLRKY +C+GL +QV DDILD K +E AG
Sbjct: 106 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 165
Query: 257 DD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D + TYP+L+G+ +K A++L EA ++L FDP++AAPL LA + RH
Sbjct: 166 KDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASHIAFRH 221
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 133/281 (47%), Gaps = 81/281 (28%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSV 120
+YM KA ++KAL E V ++ HE R L GG S+
Sbjct: 68 FNFKDYMIQKASSVHKALDEAVYVKSPIKI-----HEAMRY--------SLLAGGKRSNA 114
Query: 121 MPLACAAEMLVTLAL--------------------------------NRALLCYAVEHMA 148
MP ACA EM+ T++L +LL +A EH+A
Sbjct: 115 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLA 174
Query: 149 TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLI 207
T T VS R+V A+GE++ ++G G++AG++++I+S G+ DV L +L+FI + L+
Sbjct: 175 TATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKTAALL 234
Query: 208 EASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEATYPKLMG 267
EA+VV G L+GGGS D+EATYPKLMG
Sbjct: 235 EAAVVLGALLGGGS-----------------------------------DEEATYPKLMG 259
Query: 268 VAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ ++ +A+ L EA ++L+ FD +AAPL LAD++ R
Sbjct: 260 LEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYIAYRQ 300
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 10/162 (6%)
Query: 138 ALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSEL 195
ALL +A EH+A T K V DR +R I E+ +G++G++ G++++I S+G +V L L
Sbjct: 46 ALLSFAFEHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTL 105
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
++I + L+E SVV G ++GG +E++I ++R+Y +CVGL +QV DDILD K +E
Sbjct: 106 EWIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEEL 165
Query: 256 G--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYF 289
G D+ATYPKLMG+ AK +A EL +A + L+ F
Sbjct: 166 GKTAGKDLLTDKATYPKLMGLEKAKEFAAELATKAXEXLSSF 207
>gi|427712083|ref|YP_007060707.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
gi|427376212|gb|AFY60164.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
Length = 314
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+CEL+GG MP ACA EM+ T++L
Sbjct: 63 GKRLRPILCLATCELLGGTLEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHK 122
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E + T V ++L++ I + AV G++ G+++++ S
Sbjct: 123 VYGEDIAILAGDGLLAYAFEFVVENTVGVKAEKLLKVISRLGHAVAATGLVGGQVVDLES 182
Query: 186 KG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G ++++ L+FI + G L+EASV+ G L+ G + +++L Y + +GLA+Q+ DD
Sbjct: 183 EGITEITIETLNFIHSHKTGALLEASVLSGGLLAGAEGDAVQRLTNYARNIGLAFQIVDD 242
Query: 245 ILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD ++E G + TYP L G+ ++ A+ LV A EL+ F A P
Sbjct: 243 VLDITSTQEELGKSIGKDIQAQKVTYPSLWGIEASRVEAQRLVDLAKAELSPFGAA-AIP 301
Query: 297 LYHLADFLVSR 307
L +ADF+ +R
Sbjct: 302 LQAIADFITAR 312
>gi|406871183|gb|EKD22087.1| hypothetical protein ACD_87C00167G0001 [uncultured bacterium]
Length = 302
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 153/306 (50%), Gaps = 58/306 (18%)
Query: 53 NNNNPFPEIQIDEYMTLKAKKINKALF-----EGAAVPLILQ---YPTLPNHEGERVHGT 104
N N+ E+Q+ EY+ + I+ L E P+I Q Y L G+R+
Sbjct: 2 NRND---ELQLKEYLAGRKALIDATLDGLLPDEELCPPVIFQAVRYSLLAG--GKRLRPI 56
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
LC+A+ E VGG+ +++P+ACA E + T +L
Sbjct: 57 LCLAAAEAVGGDSKTILPVACALEYIHTYSLIHDDLPAMDNDDYRRGRLTAHKVFGEDIA 116
Query: 136 ---NRALLCYAVEHMATKTK---NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
ALL A H+ T+ + + P+ ++ EI++A G G++ G+++++ S+GK
Sbjct: 117 ILAGDALLTEAF-HLLTRKELMPGIPPEYILTVTAEIAAAAGWFGMVGGQVLDVRSEGKK 175
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL--- 246
V L L I RL+ G+LI S+ G ++ G S E L YG+ +GLA+Q+ DDIL
Sbjct: 176 VDLETLQQIHRLKTGELIRVSLRSGAILSGASTEMTASLSDYGRQIGLAFQIADDILNVE 235
Query: 247 -DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
D + K+ G D A T+P L+G+ ++ +A+ L+ EA + LA FD RAAPL +
Sbjct: 236 GDRVLLGKQTGSDAARRKVTFPSLLGIEASRAHAESLIKEALKSLASFD-DRAAPLRLIT 294
Query: 302 DFLVSR 307
+++ R
Sbjct: 295 GYILER 300
>gi|427724764|ref|YP_007072041.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
gi|427356484|gb|AFY39207.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
Length = 301
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 132/251 (52%), Gaps = 43/251 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+C ++GG M ACA EM+ T++L
Sbjct: 51 GKRLRPILCLAACNMLGGTTEMAMNTACALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHK 110
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E++A +T+ V DRL++ + + AVG G++ G+++++ S
Sbjct: 111 VYGEDIAILAGDGLLSYAFEYVA-RTQGVPADRLLQVVIRLGQAVGAEGLVGGQVVDLQS 169
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK DVS+ L+FI + G L+E V G ++ G I+KL+KY + +GL +Q+ DD
Sbjct: 170 EGKTDVSIETLNFIHTHKTGALLEVCVTSGAILAGAENAKIQKLQKYAQNIGLTFQIIDD 229
Query: 245 ILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E AG D + TYP L G+ ++ A+ L EA L + + AAP
Sbjct: 230 ILDITATQEELGKTAGKDLDAQKVTYPSLWGLEKSRSEAQRLTDEAIASLEDYGAS-AAP 288
Query: 297 LYHLADFLVSR 307
L LA+++++R
Sbjct: 289 LKALAEYIINR 299
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 148/294 (50%), Gaps = 49/294 (16%)
Query: 62 QIDEYMTLKAKKINKAL-FE-GAAVPLILQ----YPTLPNHEGERVHGTLCIASCELVGG 115
+EY+ K + +AL F G P IL+ Y L G+R+ LC+ASC L GG
Sbjct: 10 DFEEYLKNAKKVVEEALDFSLGPENPEILRESMRYSLLAG--GKRIRPILCLASCSLAGG 67
Query: 116 NESSVMPLACAAEMLVTLAL--------------------------------NRALLCYA 143
S +P A A EM+ T++L ALL A
Sbjct: 68 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127
Query: 144 VEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
E ++ ++ V P RL+ IGE+S G G++ G+++++ +GK+V L L++I +
Sbjct: 128 FEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGD-- 257
G L++A V G +I G +EE ++ L Y + +GLA+Q+ DDILD + K K AG
Sbjct: 188 GALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 247
Query: 258 --DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
D+ TYPKL+G+ +K+ A +LV A + + + A L LADF+ +R +
Sbjct: 248 LADKTTYPKLLGMEESKKRAFDLVENAKKAIKPWG-ADAKYLISLADFITNRDR 300
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 153/302 (50%), Gaps = 53/302 (17%)
Query: 54 NNNPFPEIQIDEYMTLKAKKINKAL-FE-GAAVPLILQ----YPTLPNHEGERVHGTLCI 107
NN P ++Y+T K + +AL F G P IL+ Y L G+R+ LC+
Sbjct: 6 NNIP----DFEKYLTDTKKVVEEALDFSLGPENPEILRESMRYSLLAG--GKRIRPILCL 59
Query: 108 ASCELVGGNESSVMPLACAAEMLVTLAL-------------------------------- 135
ASC L GG S +P A A EM+ T++L
Sbjct: 60 ASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILA 119
Query: 136 NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSEL 195
ALL A E ++ ++ V +RL+ +GE+S G G++ G+++++ +GK+V L L
Sbjct: 120 GDALLTRAFEMVSLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETL 179
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKK 251
++I + G L++ASV G +I G +EE + L Y + +GLA+Q+ DDILD + K
Sbjct: 180 EYIHLHKTGALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEKL 239
Query: 252 KKEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG D+ TYPKL+G+ +K+ A +LV +A + + + A L LADF+ +R
Sbjct: 240 GKTAGKDLLADKTTYPKLLGMEESKKKAFDLVDQAKKAIEPWG-LNAKYLISLADFITNR 298
Query: 308 HK 309
+
Sbjct: 299 DR 300
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 135/253 (53%), Gaps = 44/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+C+ VGG+ S MP ACA EM+ T +L
Sbjct: 44 GKRIRPILMLAACDAVGGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVS--PDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A M+ + S P+ ++R I EIS G+ G++ G+++++
Sbjct: 104 VFGEAIAILAGDALLTEAFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDM 163
Query: 184 NSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
S+GK ++ L+ + +I + G LI+ASV G ++GG E + L YG+ +GLA+Q+
Sbjct: 164 ESEGKAEMDLATVQYIHTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIA 223
Query: 243 DDILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K+AG DE ATYP +MG+A +K+ A ELV A + LA FD RA
Sbjct: 224 DDILDIEGTTEEIGKDAGSDEARGKATYPAVMGLAESKKRAVELVDMALESLAGFD-HRA 282
Query: 295 APLYHLADFLVSR 307
PL +A ++V R
Sbjct: 283 DPLRDIATYIVKR 295
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASC L GG S +P A A EM+ T++L
Sbjct: 50 GKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ V P RL+ +GE+S G G++ G+++++
Sbjct: 110 VYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLEC 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L++A V G +I G +E+ + L Y + +GLA+Q+ DDI
Sbjct: 170 EGKEVDLKTLEYIHLHKTGALLKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDI 229
Query: 246 LD----NMKKKKEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K K AG D+ TYPKL+G+ +K+ A +LV +A + + + P A L
Sbjct: 230 LDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWGPD-AKYL 288
Query: 298 YHLADFLVSRHK 309
LADF+ +R +
Sbjct: 289 ISLADFITNRDR 300
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 133/252 (52%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASC L GG S +P A A EM+ T++L
Sbjct: 50 GKRIRPILCLASCSLAGGKPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ V P RL+ IGE+S G G++ G+++++
Sbjct: 110 VYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLEC 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L++A V G +I G +E+ ++ L Y + +GLA+Q+ DDI
Sbjct: 170 EGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDI 229
Query: 246 LD----NMKKKKEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K K AG D+ TYPKL+G+ +K+ A +LV +A + + + + A L
Sbjct: 230 LDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWG-SEAKYL 288
Query: 298 YHLADFLVSRHK 309
LADF+ +R +
Sbjct: 289 ISLADFITNRDR 300
>gi|39996864|ref|NP_952815.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|409912286|ref|YP_006890751.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
gi|39983752|gb|AAR35142.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 140/253 (55%), Gaps = 44/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+RV L +A+C+ VGG+ + +P ACA EM+ T +L N
Sbjct: 44 GKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHK 103
Query: 139 LLCYAVEHMA---------------TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
+ A+ +A + V DRL+ I EI+ G+RG++ G+++++
Sbjct: 104 VFGEAIAILAGDALLTEAFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDM 163
Query: 184 NSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
S+G K++ L+ + +I + G LI+AS+ G ++GG + + ++ + +YG+ +GLA+Q+
Sbjct: 164 ESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIA 223
Query: 243 DDILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K+AG DE ATYP ++G+A +KR A+EL+ A + L+ FD RA
Sbjct: 224 DDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAESKRRAQELLDLAIEALSPFD-HRA 282
Query: 295 APLYHLADFLVSR 307
PL +A ++VSR
Sbjct: 283 DPLREIARYIVSR 295
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 133/252 (52%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASC L GG S +P A A EM+ T++L
Sbjct: 49 GKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ V P+RL+ IGE+S G G++ G+++++
Sbjct: 109 VYGDAVAILAGDALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLEC 168
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L++A V G +I G +E+ ++ L Y + +GLA+Q+ DDI
Sbjct: 169 EGKEVDLDTLEYIHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDI 228
Query: 246 LD----NMKKKKEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K K AG D+ TYPKL+G+ +K+ A +LV +A + + + A L
Sbjct: 229 LDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWG-ADANHL 287
Query: 298 YHLADFLVSRHK 309
LADF+ +R +
Sbjct: 288 ISLADFITNRDR 299
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 133/252 (52%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASC L GG S +P A A EM+ T++L
Sbjct: 50 GKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ V P RL+ IGE+S G G++ G+++++
Sbjct: 110 VYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLEC 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L++A V G +I G +E+ ++ L Y + +GLA+Q+ DDI
Sbjct: 170 EGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDI 229
Query: 246 LD----NMKKKKEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K K AG D+ TYPKL+G+ +K+ A +LV +A + + + + A L
Sbjct: 230 LDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWG-SDAKYL 288
Query: 298 YHLADFLVSRHK 309
LADF+ +R +
Sbjct: 289 ISLADFITNRDR 300
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 133/252 (52%), Gaps = 41/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ASC L GG S +P A A EM+ T++L
Sbjct: 50 GKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ ++ V P+RL+ IGE+S G G++ G+++++
Sbjct: 110 VYGDAIAILAGDALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLEC 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK+V L L++I + G L++A V G +I G ++E ++ L Y + +GLA+Q+ DDI
Sbjct: 170 EGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDI 229
Query: 246 LD----NMKKKKEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K K AG D+ TYPKL+G+ +K+ A +LV +A + + + A L
Sbjct: 230 LDLTSSSEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDLVDKAKKAIEPWG-LDAQYL 288
Query: 298 YHLADFLVSRHK 309
LADF+ +R +
Sbjct: 289 ISLADFITNRDR 300
>gi|404493293|ref|YP_006717399.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545350|gb|ABA88912.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
Length = 296
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 135/262 (51%), Gaps = 45/262 (17%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y T G+R+ L +A+CE VGG VMP ACA EM+ T +L
Sbjct: 36 MRYSTFAA--GKRIRPILMMAACEAVGGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDD 93
Query: 136 ------------NRALLCYAVEHMATKT----------KNVSPDRLVRAIGEISSAVGTR 173
AL A + + T+ VS + R +I+ G+
Sbjct: 94 FRRGRPTCHKVYGDALAILAGDALLTEAFILLSRLGEDGGVSLEAARRVSADIARCAGSM 153
Query: 174 GVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGK 233
G++ G++++++S+GK++ L+ L++I + G LI ASV G ++GG S E ++ L +Y K
Sbjct: 154 GMVGGQVVDMDSEGKEIDLATLEYIHTRKTGALILASVQSGAVLGGASSEQVDNLGRYAK 213
Query: 234 CVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQE 285
GLA+QV DDILD + + K+ G D+ ATYP L+G+ A+ AKEL A +
Sbjct: 214 AAGLAFQVADDILDIVGDQELLGKDVGSDQERGKATYPALLGLDAARDRAKELRDVALES 273
Query: 286 LAYFDPTRAAPLYHLADFLVSR 307
L+ FD RA PL +A ++V R
Sbjct: 274 LSGFDE-RAEPLRSIAHYIVDR 294
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
Length = 294
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 41/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A CE VGG M ACA E + T +L
Sbjct: 44 GKRLRPILTLACCEAVGGALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHR 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL +A E A V P+ + IGE++ A GT G++ G++++I
Sbjct: 104 QYGEATAILAGDALLTHAFELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQG 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ + + L +L I + G LI + + G +GGG+ + ++ L++YG+ +GLA+Q+ DDI
Sbjct: 164 EKRPLELVQLQNIHIHKTGALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDI 223
Query: 246 LDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K G D+ATYPKLMG+A A+ A+ L+ EA + L F P +A PL
Sbjct: 224 LDEVGDTKTLGKATGVDRALDKATYPKLMGLAQAREAAENLMQEATRCLTEFGP-QADPL 282
Query: 298 YHLADFLVSR 307
LA ++++R
Sbjct: 283 RALAQYVIAR 292
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 131/252 (51%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A CE+VGGN + + ACA EM+ T +L
Sbjct: 44 GKRLRPILCLAGCEIVGGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWV 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A + +R V+ I EI+ A G G++ G+ ++++
Sbjct: 104 KFGEATAILAGDALLNRAFEVLADWEFDC--NRKVKVISEIARASGMLGMVLGQQCDLDA 161
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ DV L EL FI + + G+LI ASVV G + GGGS E+I+ LR+YG +GLA+Q+ DD
Sbjct: 162 EGRGDVPLEELLFIHKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDD 221
Query: 245 ILDNM----KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD + K K G D + T+ + GV A++ A E V A + L+ F + P
Sbjct: 222 VLDVVGDQEKLGKNVGSDLEKGKTTFVTIFGVEKARKMAYEEVERAVEALSIFPAEKREP 281
Query: 297 LYHLADFLVSRH 308
L +A F+V R
Sbjct: 282 LEAIARFVVERE 293
>gi|361067801|gb|AEW08212.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
Length = 151
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 100/151 (66%), Gaps = 9/151 (5%)
Query: 166 ISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED 224
+ A+G+ G++AG++++++S G +V L L++I + L+E SVV G +IGGGS+E+
Sbjct: 1 LGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGSVVIGAIIGGGSDEE 60
Query: 225 IEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAK 276
IE+LRK+ +C+GL +QV DDILD K +E G D+ TYPKL+G+ ++ +A+
Sbjct: 61 IERLRKFARCIGLLFQVVDDILDVTKSSQELGKTACKDLVADKLTYPKLLGLEKSREFAQ 120
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
EL +A +L+ FD +A PL LAD++ R
Sbjct: 121 ELNRQARDQLSVFDVEKAKPLICLADYIAHR 151
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 131/250 (52%), Gaps = 41/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+ E+ GG+ + MP ACA EM+ T +L
Sbjct: 46 GKRLRPILCLAAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A + ++ ++ P +++ + + A G RG++ G+++++
Sbjct: 106 VFGEAIAVLAGDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLEC 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ + V L+ ++++ + G L+ AS+ G L+GGGS+ + L++YG +GLA+Q+ DD+
Sbjct: 166 ENRTVDLATVEYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDL 225
Query: 246 LD------NMKKK--KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD M KK +A ++ TYP L+G+ ++ A+E V A Q LA FD RA PL
Sbjct: 226 LDVEGDAREMGKKPGSDAAKNKKTYPALLGITRSREAAREHVDAALQALAAFD-DRAEPL 284
Query: 298 YHLADFLVSR 307
+A +L+ R
Sbjct: 285 RAIARYLLVR 294
>gi|375332057|gb|AFA52568.1| farnesyltransferase [Vaucheria litorea]
Length = 349
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 159/335 (47%), Gaps = 58/335 (17%)
Query: 26 KVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVP 85
K+ P + +S+ L ++ +L I +Y+ K ++KAL E VP
Sbjct: 20 KIFPGTPSKGTIRSAPLTKSISLKQSVAPATSSTTFDIKKYLYEKKVIVDKALSE-CIVP 78
Query: 86 L---------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL- 135
+ + Y L G+RV LCIAS E+ GG S +P A A EM+ +++L
Sbjct: 79 IGAENEKLCESMNYSLLAG--GKRVRPILCIASSEIFGGEIESTLPTALALEMIHSMSLV 136
Query: 136 -------------------------------NRALLCYAVEHMATKTKNVSPDRLVRAIG 164
ALL + E +A TK V +R+V +
Sbjct: 137 HDDLPAMDNDDLRRGKPTNHVVYGEALAILAGDALLSKSFEIVAKHTKGVDAERVVDVLA 196
Query: 165 EISSAVGTRGVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE 223
+ VG G+ G+ M++ +GK D +L +L +I + + G L++A+ G ++GG
Sbjct: 197 RLGECVGEVGLAGGQAMDLELEGKEDTTLEQLRWIHKHKTGALLKAACTTGAVLGGAEPS 256
Query: 224 DIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYA 275
++E + ++ + +GLA+QV DDILD + K AG DEA TY KL+G+ GA++ A
Sbjct: 257 EVEAIERFSESIGLAFQVADDILDCTQTSEQLGKTAGKDEAVSKTTYVKLLGMDGARKEA 316
Query: 276 KELVAEANQELAYFDP--TRAAPLYHLADFLVSRH 308
K LV +A LA +P +RA L +A F++ R
Sbjct: 317 KRLVDDA---LAALEPFGSRAEALKAIAHFIIERE 348
>gi|361067381|gb|AEW08002.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151014|gb|AFG57529.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151016|gb|AFG57530.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151022|gb|AFG57533.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151024|gb|AFG57534.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151028|gb|AFG57536.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
Length = 147
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 98/147 (66%), Gaps = 9/147 (6%)
Query: 170 VGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
+G++G++ G++++I+ +G V L+ L++I + L+E SVVCG +I G SE +IE++
Sbjct: 1 IGSQGLVGGQVVDISCEGNSSVDLATLEWIHIHKTAVLLECSVVCGAIISGASENEIERI 60
Query: 229 RKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVA 280
+ Y + VGL +QV DDILD K KE G D+ATYPKLMG+ AK++A EL+
Sbjct: 61 KSYARSVGLLFQVVDDILDVTKSSKELGKTAGKDLITDKATYPKLMGLEKAKQFAVELLG 120
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSR 307
A ++L+ FDP +AAPL +A+++ R
Sbjct: 121 RAKEDLSCFDPKKAAPLLGIAEYIAFR 147
>gi|427701630|ref|YP_007044852.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
gi|427344798|gb|AFY27511.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
Length = 300
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 40/229 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+CEL GG+ MP A A EM+ T++L
Sbjct: 50 GKRLRPILTLAACELAGGDADLAMPTAVAMEMIHTMSLIHDDLPAMDNDDLRRGRPTNHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++ V +RL++ +GE+S A G G++ G+++++
Sbjct: 110 VYGEAKAILAGDALLTRAFEMVALRSPGVPAERLLQVVGELSLASGAPGLVGGQVVDLEC 169
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ + V L L++I + G L+ A V+ G LI G SEE + LR Y + +GLA+Q+ DDI
Sbjct: 170 EARQVDLDTLEYIHLHKTGALLRACVISGALIAGASEELLTALRTYARGIGLAFQIIDDI 229
Query: 246 LD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
LD K+ D+ TYPKL+G+ ++R A LV EA L
Sbjct: 230 LDVTASSDVLGKTAGKDLAADKTTYPKLLGLEESRRRADALVGEAKAVL 278
>gi|428219684|ref|YP_007104149.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427991466|gb|AFY71721.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 130/259 (50%), Gaps = 53/259 (20%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+CEL+GG+ MP ACA EM+ T++L
Sbjct: 57 GKRLRPILTLAACELLGGSIEVAMPTACAMEMIHTMSLIHDDLPAMDNDDFRRGKPTNHK 116
Query: 136 ----------NRALLCYAVEHMATKTKNVSPD-----RLVRAIGEISSAVGTRGVLAGRI 180
LL YA E++A +T SPD +++R I + AV G++ G++
Sbjct: 117 VYGEDMAILAGDGLLAYAFEYIADRTP--SPDHTTAKQVLRVIAHLGHAVAATGLVGGQV 174
Query: 181 MEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAY 239
+++ +GK D + L FI + L+EA V CG ++ G + D+++L Y +GLA+
Sbjct: 175 VDLECEGKTDTTAETLTFIHMHKTAALLEACVSCGAILAGATAIDLQRLSTYANNIGLAF 234
Query: 240 QVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
Q+ DDILD K AG D A TYP L G+ ++ A+ LV EAN +L DP
Sbjct: 235 QIIDDILDITATAEQLGKTAGKDLAAQKVTYPSLWGIPTSQAKAQALVEEANAQL---DP 291
Query: 292 --TRAAPLYHLADFLVSRH 308
A PL +A+F+ +R+
Sbjct: 292 YGNAAMPLKAIANFITARN 310
>gi|383143869|gb|AFG53405.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143871|gb|AFG53406.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143875|gb|AFG53408.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143877|gb|AFG53409.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143885|gb|AFG53413.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143887|gb|AFG53414.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143891|gb|AFG53416.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143893|gb|AFG53417.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
Length = 151
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 100/151 (66%), Gaps = 9/151 (5%)
Query: 166 ISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED 224
+ A+G+ G++AG++++++S G +V L L++I + L+E +VV G +IGGGS+E+
Sbjct: 1 LGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGAVVIGAIIGGGSDEE 60
Query: 225 IEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAK 276
IE+LRK+ +C+GL +QV DDILD K +E G D+ TYPKL+G+ ++ +A+
Sbjct: 61 IERLRKFARCIGLMFQVVDDILDVTKSSEELGKTACKDLVADKLTYPKLLGLEKSREFAQ 120
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
EL +A +L+ FD +A PL LAD++ R
Sbjct: 121 ELNRQATDQLSVFDVEKAKPLICLADYIAHR 151
>gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula]
Length = 146
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 96/145 (66%), Gaps = 9/145 (6%)
Query: 173 RGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKY 231
G++AG++++INS+G DV L L+FI + L+E +VV G ++GGGS+ED+EKLRK+
Sbjct: 1 EGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKF 60
Query: 232 GKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEAN 283
+GL +QV DDILD K +E G D+ TYPKL+G+ +K +A++L +A
Sbjct: 61 ATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQ 120
Query: 284 QELAYFDPTRAAPLYHLADFLVSRH 308
++L+ FD ++APL LA+++ R
Sbjct: 121 EQLSGFDLNKSAPLIALANYIAYRQ 145
>gi|359474991|ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 152/323 (47%), Gaps = 59/323 (18%)
Query: 36 VPKSSSLDQAENL--TIKSNNNNPFPEIQID--EYMTLKAKKINKALFEGAAVPL----- 86
+P SSL+ + T S + +P +Q D Y T +IN L E A+P+
Sbjct: 19 LPNRSSLNLPRTIRCTSPSISVSPSKSMQFDLRSYWTTLISEINTKLEE--AIPVKYPQQ 76
Query: 87 ---ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML------------- 130
++Y L G+R +C+A CEL GG+ + P ACA EM+
Sbjct: 77 IYEAMRYSVLAKG-GKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCM 135
Query: 131 -----------------VTLAL--NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSA 169
V +A+ AL H+ + T + V +L+R I EI+ +
Sbjct: 136 DDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARS 195
Query: 170 VGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLR 229
VG+ G+ AG+ +++ V DF++R + G++ E S VCG +GG +++DI +LR
Sbjct: 196 VGSTGMAAGQFLDLEGAPNSV-----DFVQRKKFGEMAECSAVCGGFLGGAADDDILRLR 250
Query: 230 KYGKCVGLAYQVWDDILD---NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
+YG+ VG+ YQV DD+L ++ +E +Y + G+ A A+EL A+A +EL
Sbjct: 251 RYGRAVGMLYQVVDDVLKAKTKSEEDEEKKKKGKSYVDVYGMEKAMEVAEELRAKAKREL 310
Query: 287 AYFDP--TRAAPLYHLADFLVSR 307
+ FD PLY DF R
Sbjct: 311 SGFDKYGDSVVPLYSFVDFAAER 333
>gi|383143867|gb|AFG53404.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143873|gb|AFG53407.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143879|gb|AFG53410.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143881|gb|AFG53411.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143883|gb|AFG53412.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143889|gb|AFG53415.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
Length = 151
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 100/151 (66%), Gaps = 9/151 (5%)
Query: 166 ISSAVGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED 224
+ A+G+ G++AG++++++S G +V L L++I + L+E +VV G +IGGGS+E+
Sbjct: 1 LGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGAVVIGAIIGGGSDEE 60
Query: 225 IEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAK 276
IE+LRK+ +C+GL +QV DDILD K +E G D+ TYPKL+G+ ++ +A+
Sbjct: 61 IERLRKFARCIGLMFQVVDDILDVTKSSEELGKTACKDLVADKLTYPKLLGLEKSREFAQ 120
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
EL +A +L+ FD +A PL LAD++ R
Sbjct: 121 ELNRQARDQLSVFDVEKAKPLICLADYIAHR 151
>gi|383151012|gb|AFG57528.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151018|gb|AFG57531.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151020|gb|AFG57532.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151026|gb|AFG57535.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
gi|383151030|gb|AFG57537.1| Pinus taeda anonymous locus 0_16664_01 genomic sequence
Length = 147
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 97/147 (65%), Gaps = 9/147 (6%)
Query: 170 VGTRGVLAGRIMEINSKG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
+G++G++ G++++I+ +G V L+ L++I + L+E SVVCG +I G SE +IE++
Sbjct: 1 IGSQGLVGGQVVDISCEGNSSVDLATLEWIHIHKTAVLLECSVVCGAIISGASENEIERI 60
Query: 229 RKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVA 280
+ Y + VGL +QV DDILD K KE G D+ATYPKLMG+ AK++A EL+
Sbjct: 61 KSYARSVGLLFQVVDDILDVTKSSKELGKTAGKDLITDKATYPKLMGLEKAKQFAVELLG 120
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSR 307
A ++L+ FDP +A PL +A+++ R
Sbjct: 121 RAKEDLSCFDPKKATPLLGIAEYIAFR 147
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 131/255 (51%), Gaps = 48/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L +A+CE VGG MP ACA EM+ T +L
Sbjct: 44 GKRVRPVLMLAACEAVGGQIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATK--TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
LL A + M+ + P + I EI++ GT G++ G+++++
Sbjct: 104 VFGEAIAILAGDGLLTEAFKLMSDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDM 163
Query: 184 NSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
S+GK D+ L + +I + G LI+ASVV G L+GG ++ + +R+YG+ GLA+Q+
Sbjct: 164 ESEGKPDMDLPTVQYIHAHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIA 223
Query: 243 DDILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K+AG DE ATYP +MG+A AK+ A+ ++ EA L +P A
Sbjct: 224 DDILDIEGTTEEIGKDAGSDEARGKATYPAVMGLAAAKQEAQAMMDEAMLAL---EPLGA 280
Query: 295 A--PLYHLADFLVSR 307
A PL +A ++V R
Sbjct: 281 AAEPLRAIARYIVER 295
>gi|431794334|ref|YP_007221239.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784560|gb|AGA69843.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 289
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 41/232 (17%)
Query: 116 NESSVMPLACAAEMLVTLAL--------------------------------NRALLCYA 143
+E S++P ACA E++ T +L ALL YA
Sbjct: 57 DEESILPAACALELIHTYSLIHDDLPAMDNDDYRRGRLSNHKAFGVGQAILAGDALLTYA 116
Query: 144 VEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
E +A V+P+R +R I E++ A G G++ G+++++ ++ KD++L+EL+ + RL+
Sbjct: 117 FELLAQSITGVTPERQLRVIREVAQAAGPEGMVGGQVLDLAAEEKDLALAELERVHRLKT 176
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG------- 256
G ++ S G ++ GG+EE IE L Y + +GLA+Q+ DDILD K G
Sbjct: 177 GAMLVVSARLGAILAGGTEEKIEALTNYAQAIGLAFQIRDDILDLEGDSKSLGKPAQSDI 236
Query: 257 -DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ATYP LMG+ GAK EA+ L R+ L+ LAD++ R
Sbjct: 237 RQHKATYPSLMGIEGAKAEFMNKTDEAHAALETL-GERSGFLHDLADYIAQR 287
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A C VGG+E SVM ACA EM+ T +L
Sbjct: 44 GKRLRPVLVLAGCRAVGGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHV 103
Query: 136 --NRALLCYAVEHMATKTKNV----------SPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
A A + + T+ V SP +++ I E++ A G+ G++ G++M++
Sbjct: 104 VFGEATAILAGDGLLTRAFGVLAEEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDM 163
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+ K + ++ + +I + G LI AS+ G L+GGGS E +E L +YG +GLA+Q+ D
Sbjct: 164 ESENKQIDVATMAYIHAHKTGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITD 223
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD ++ G +++ATYP L+G+ A++ A+ +V A LA FD +A
Sbjct: 224 DLLDIQGDPEKIGKPVGSDVKNNKATYPALLGLEKARQEAERVVQAALDSLAGFD-EKAE 282
Query: 296 PLYHLADFLVSR 307
L LA +L+ R
Sbjct: 283 LLRELAQYLLVR 294
>gi|296133204|ref|YP_003640451.1| polyprenyl synthetase [Thermincola potens JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E VGG+ V+P ACA EM+ T +L
Sbjct: 47 GKRLRPVLVLAAAEAVGGDVKKVIPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHV 106
Query: 136 ----------NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A E +++ + + P +++R I EIS A G+RG++ G++++I
Sbjct: 107 VYGEAIAILAGDALLTLAFEVLSSLVEEPGIDPQKVLRVIKEISLAAGSRGLIGGQVVDI 166
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+ D+S L +I + G L +A++ G ++ SEE I L +Y +GL +Q+ D
Sbjct: 167 GSENLDISAETLKYIHIHKTGALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITD 226
Query: 244 DIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K K G D +ATYP + G+ AK+ A+E VAE+ L FD RA
Sbjct: 227 DILDIEGDTEKLGKPVGSDIKKKKATYPSIFGLQEAKQMAREAVAESLMSLEGFD-ERAD 285
Query: 296 PLYHLADFLVSR 307
L +A +L+ R
Sbjct: 286 FLREMARYLLER 297
>gi|404496792|ref|YP_006720898.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|418065257|ref|ZP_12702631.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
gi|78194397|gb|ABB32164.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|373562435|gb|EHP88646.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
Length = 297
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 44/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+CE VGG +P ACA EM+ T +L
Sbjct: 44 GKRIRPVLMLAACEAVGGTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHK 103
Query: 136 --NRALLCYAVEHMATKTKNV--SPD--------RLVRAIGEISSAVGTRGVLAGRIMEI 183
A+ A + + T+ + SP+ R++ I EI G+RG++ G+++++
Sbjct: 104 VFGEAIAILAGDALLTEAFILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDM 163
Query: 184 NSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
S+GK D+ L+ + +I + G L++ASV G ++GG + + + +YG+ +GLA+Q+
Sbjct: 164 ESEGKKDIDLATVQYIHTHKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIA 223
Query: 243 DDILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K+AG DE ATYP +MG+A +KR A+ELV A + L+ F +A
Sbjct: 224 DDILDIEGTTEQIGKDAGSDEARGKATYPAVMGLADSKRRAQELVDLALEALSPFG-EKA 282
Query: 295 APLYHLADFLVSR 307
PL +A ++VSR
Sbjct: 283 EPLREIARYIVSR 295
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 136/255 (53%), Gaps = 43/255 (16%)
Query: 97 EGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL--------ALNRALL------CY 142
EG+R+ LCIA+ E VGG +S V+P ACA E++ T A++ LL C+
Sbjct: 63 EGKRIRPILCIAAAESVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCH 122
Query: 143 AVEHMATKT--------------------KNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
A + AT N + + ++ I IS+A G G++ G++ +
Sbjct: 123 AAFNEATAILAGDALLTLAFQVLSEFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRD 182
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
I S+ + L++L+ + L+ G LI ASV G ++ S + I++L+ Y K +GLA+Q+
Sbjct: 183 IASENTQILLNKLEELHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIA 242
Query: 243 DDILDNMKK----KKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DD+L+ M K G D ++TYP L+G+ ++ YAK+L+ EA LA FD ++
Sbjct: 243 DDLLNAMGDPTITGKPVGTDNVRKKSTYPSLLGIDESENYAKKLIKEALHALAIFD-NKS 301
Query: 295 APLYHLADFLVSRHK 309
PL +A +++ R++
Sbjct: 302 DPLRAIALYIIERNR 316
>gi|333370560|ref|ZP_08462555.1| geranyltranstransferase [Desmospora sp. 8437]
gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
Length = 298
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 140/298 (46%), Gaps = 52/298 (17%)
Query: 62 QIDEYMTLKAKKINKALFE----GAAVPLILQ----YPTLPNHEGERVHGTLCIASCELV 113
+I Y+ KAK + L E A +P L+ Y L G+R+ L +A+ E +
Sbjct: 3 EIQRYLKEKAKSVEARLKEYMERPAGIPETLREAMAYSLLAG--GKRLRPVLTLATAEAL 60
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GG+E +P ACA EM+ T +L ALL
Sbjct: 61 GGDEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLT 120
Query: 142 YAVEHMATKTKNVSPDR--LVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
A + MA + R + I E + G G++ G++ +I +G++VSL EL I
Sbjct: 121 RAFDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDIH 180
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEA 255
R + G LI SV G ++GG E++++ L Y + +GLA+Q+ DD+L D+ K K
Sbjct: 181 RSKTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKLGKPV 240
Query: 256 GDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
G DE +TYP L+G+ ++ + LV EA Q + + R A L +AD+L R K
Sbjct: 241 GSDEVKNKSTYPSLLGLDSSRERIRSLVEEAKQLITAQERIRPARLLAIADYLTVRDK 298
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 59/309 (19%)
Query: 49 TIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYP---------TLPNHEGE 99
++ + ++ P+ + Y T +IN+ L + AVP+ QYP ++ +
Sbjct: 7 SLSVSTHSKTPQFDLKTYWTTLILEINQKLDQ--AVPI--QYPDKIYEAMRYSVLAKGAK 62
Query: 100 RVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------ 135
R +C+A+CEL GGN + P ACA EM+ + +L
Sbjct: 63 RAPPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIY 122
Query: 136 --------NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL H+ + T + V RL+ I EI+ AVG+ G+ AG+ +++
Sbjct: 123 GVDMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEG 182
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
V +F++ + G++ E S VCG L+ G +++I++LR+YG+ VG+ YQV DDI
Sbjct: 183 GPNSV-----EFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDI 237
Query: 246 LDNMKKKKEAGDDE-----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA--PLY 298
L+ K + +D+ +Y L GV A A+EL A+A +EL F+ + PLY
Sbjct: 238 LEAKTMKSKVDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLY 297
Query: 299 HLADFLVSR 307
D+ R
Sbjct: 298 SFVDYAADR 306
>gi|449454249|ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 335
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 141/285 (49%), Gaps = 59/285 (20%)
Query: 73 KINKALFEGAAVPLILQYP---------TLPNHEGERVHGTLCIASCELVGGNESSVMPL 123
+IN+ L E AVPL QYP ++ +R +C+A+CEL G + + P
Sbjct: 52 EINQKLDE--AVPL--QYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPT 107
Query: 124 ACAAEML------------------------------VTLAL--NRALLCYAVEHMATKT 151
ACA EM+ V +A+ AL +H+ + T
Sbjct: 108 ACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHT 167
Query: 152 K-NVSPD-RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEA 209
++ P+ RL+R + EI+ AVG+RG+ AG+ +++ V +F++ + G++ +
Sbjct: 168 PFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSV-----EFVQEKKFGEMAQC 222
Query: 210 SVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDE-----ATYPK 264
S VCG L+ G + +I++LR+YG+ VG+ YQV DDIL+ KK + D+ +Y +
Sbjct: 223 SAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVE 282
Query: 265 LMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADFLVSR 307
+ G+ AK A+EL A+A EL F+ + PLY D+ R
Sbjct: 283 VYGIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLYSFVDYAADR 327
>gi|10801558|dbj|BAB16692.1| GGPP synthase 2 [Hevea brasiliensis]
Length = 126
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 78/100 (78%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL ++ EH+A TKNVSPDR+VRAI E+ SAVG G++AG+I++I S+GK V+L +L++
Sbjct: 26 ALLSFSFEHVAAATKNVSPDRVVRAIAELGSAVGAAGLVAGQIVDIESEGKQVTLEDLEY 85
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
I + KL+EA+VVCG +IGG +E E++RKY +C+GL
Sbjct: 86 IHINKTSKLLEAAVVCGAIIGGADDESTERVRKYARCIGL 125
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 44/255 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+RV L +A+C+ VGG+ +P ACA EM+ T +L N
Sbjct: 44 GKRVRPILMLAACQAVGGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHK 103
Query: 139 LLCYAVEHMATKT---------------KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
+ AV +A V + + I +I+S G+ G++ G+++++
Sbjct: 104 VFGEAVAILAGDALLTEAFKLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDM 163
Query: 184 NSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
S+GK D+ L + +I + G LI+A+VV G L+GG E + + +YG GLA+Q+
Sbjct: 164 ESEGKSDIDLPTVQYIHTHKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIA 223
Query: 243 DDILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K+AG D+ ATYP +MG+A AK+ A ++ EA + L F + A
Sbjct: 224 DDILDIEGTTEEIGKDAGSDQARGKATYPAVMGLAAAKQEATTMMDEAFKALEIFG-SEA 282
Query: 295 APLYHLADFLVSRHK 309
PL +A ++V+R K
Sbjct: 283 DPLREIARYIVTRKK 297
>gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis
paniculata]
Length = 140
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 86/117 (73%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL A H+A KTKNV R+VRAI E++ A+G+ G++AG+I++++S+G+ +SL+EL++
Sbjct: 23 ALLSLAFNHVAEKTKNVEHCRVVRAIAELALAIGSEGLVAGQIVDLDSEGEKISLNELEY 82
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE 254
I + L+EA+ VCG ++GGG ++E LRKY +C+GL +QV DDILD K ++
Sbjct: 83 IHVHKTSMLLEAAAVCGGILGGGESTEVESLRKYARCIGLLFQVVDDILDVTKSSEQ 139
>gi|359474993|ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 55/295 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + Y T +IN L E A+P+ ++Y L G+R +C+A CE
Sbjct: 47 QFDLRSYWTTLISEINTKLEE--AIPVKYPQQIYEAMRYSVLAKG-GKRAPPVMCVAVCE 103
Query: 112 LVGGNESSVMPLACAAEML------------------------------VTLAL--NRAL 139
L GG+ + P ACA EM+ V +A+ AL
Sbjct: 104 LFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDAL 163
Query: 140 LCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
H+ + T + V +L+R I EI+ +VG+ G+ AG+ +++ V DF
Sbjct: 164 FPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSV-----DF 218
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD---NMKKKKE 254
++R + G++ E S VCG +GG +++DI +LR+YG+ VG+ YQV DD+L ++ +E
Sbjct: 219 VQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEE 278
Query: 255 AGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADFLVSR 307
+Y + G+ A A+EL A+A +EL+ FD PLY DF R
Sbjct: 279 KKKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 41/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E VG ++P ACA E + T +L
Sbjct: 47 GKRLRPILVLAAGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHK 106
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E ++ + P+R++RA E++++ G++G++ G+++++ +
Sbjct: 107 VYGEAIALLAGDALLTLAFEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEA 166
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ V+L ++++I + G LI A + G ++GG EE + L +YG+ +GLA+Q+ DDI
Sbjct: 167 EGQPVTLEKVNYIHNHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDI 226
Query: 246 LDNM----KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K+ G D +ATYP +GV +++ A EL AEA P A PL
Sbjct: 227 LDITGDFSQTGKQGGVDAARGKATYPACLGVEASRQKAGELCAEAGALARALGPA-AEPL 285
Query: 298 YHLADFLVSRH 308
LA F++ R
Sbjct: 286 ELLAGFVLRRQ 296
>gi|433654909|ref|YP_007298617.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293098|gb|AGB18920.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 293
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 49/237 (20%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCI+SCELVGG+ +P+ACA E + T +L
Sbjct: 42 GKRLRPVLCISSCELVGGDRDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 136 ----------NRALLCYAVE---HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
ALL Y E H A + N ++RAI EI+ A G G++ G++++
Sbjct: 102 VYGEALAILAGDALLNYGFEVLIHHALDSANCQ--NILRAIEEIAHAAGCHGMIGGQVVD 159
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ S+ K+++ EL F+ + G LI+ASVV G ++GG +E I+KL Y + +GLA+Q+
Sbjct: 160 LLSENKNITEEELKFMHDHKTGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIK 219
Query: 243 DDILD----------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYF 289
DDILD N+K E G ++T+ + G+ + KEL A A + L F
Sbjct: 220 DDILDVLGDESKLGKNVKSDSENG--KSTFVSVFGLQRSISLVKELTASAIRILDDF 274
>gi|357127831|ref|XP_003565581.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 383
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 65/310 (20%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE-------------GERVHGTLCI 107
++Y+T AK +++AL A+P L++ P+H G+RV L I
Sbjct: 74 FDFEQYLTAHAKSVHEALDRALALPARLEHE--PDHHWLIESMRYSVLSGGKRVRPVLAI 131
Query: 108 ASCELVGGNESSVMPLACAAEMLVTLAL---------NRALL-----CYA---------- 143
A+CE VGG+ ++ P+ACA EM+ ++L + AL C+A
Sbjct: 132 AACEFVGGDAAAAAPVACAVEMVHAMSLVHDEMPCMDDDALRRGRPSCHAAFGEHAALLA 191
Query: 144 --------VEHMATKTKN----VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-- 189
EH+A + V +R +R++ EI++A G GV AG++ + +G+
Sbjct: 192 GDALLALAFEHLALGYADAGIVVPAERALRSVAEIANAAGIGGVAAGQLADKACEGRGSR 251
Query: 190 ---VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
VSL+ L+ + + +L+EA+ V G ++GGG+ ++E++R+Y + VGL +QV DD+L
Sbjct: 252 VGVVSLATLEHVHVHKTARLLEAAAVSGAIVGGGTGAEVERVRRYARRVGLLFQVVDDVL 311
Query: 247 DNMKKKKEAGD--------DEATYPKLM-GVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
D + E G D++TYPKL+ GV A+ YA EL+A A EL D RAAPL
Sbjct: 312 DVTRTSVELGKTAGKDLVADKSTYPKLLGGVDKARAYADELLAMAEAELEGVDARRAAPL 371
Query: 298 YHLADFLVSR 307
LA F+ R
Sbjct: 372 RQLARFVAYR 381
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 55/295 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + Y T +IN L E A+P+ ++Y L G+R +C+A CE
Sbjct: 47 QFDLRSYWTTLISEINTKLEE--AIPVKYPQQIYEAMRYSVLAKG-GKRAPPVMCVAVCE 103
Query: 112 LVGGNESSVMPLACAAEML------------------------------VTLAL--NRAL 139
L GG+ + P ACA EM+ V +A+ AL
Sbjct: 104 LFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDAL 163
Query: 140 LCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
H+ + T + V +L+R I EI+ +VG+ G+ AG+ +++ V DF
Sbjct: 164 FPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSV-----DF 218
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD---NMKKKKE 254
++R + G++ E S VCG +GG +++DI +LR+YG+ VG+ YQV DD+L ++ +E
Sbjct: 219 VQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDMLKAKTKSEEDEE 278
Query: 255 AGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADFLVSR 307
+Y + G+ A A+EL A+A +EL+ FD PLY DF R
Sbjct: 279 KKKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 161/346 (46%), Gaps = 71/346 (20%)
Query: 13 PLHHHSKTP-----LGKPKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQ--IDE 65
P H+++P L +P VA S + A++ +K+ ++ +DE
Sbjct: 27 PAFRHARSPVVRSVLAEPSVA-----------SPAELAKDFDLKAYFAQKVAAVEKALDE 75
Query: 66 YMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLAC 125
+T + K + E ++Y L G+RV +CIA+CE+ GG E+ MP A
Sbjct: 76 SLTCTTPE-TKIIVES------MRYSLLAG--GKRVRPVMCIAACEMFGGTEAMAMPTAV 126
Query: 126 AAEMLVTLAL--------------------------------NRALLCYAVEHMA--TKT 151
A EM+ T++L ALL + EH A +
Sbjct: 127 AIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTA 186
Query: 152 KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-VSLSELDFIKRLRCGKLIEAS 210
+ + +R+V I + AVG G+ G++M++ + K VSL EL +I + KL+E S
Sbjct: 187 EGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLLEVS 246
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATY 262
V G ++ G +++D+ + Y +G+A+QV DDILD K AG DE TY
Sbjct: 247 VAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKTAGKDEDTDKTTY 306
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
PKLMG+ GA+ A L +EA LA + +A PL +A ++V R
Sbjct: 307 PKLMGLDGARAEADRLYSEAIDSLAPYG-EKAVPLIAIAKYIVERQ 351
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|423073546|ref|ZP_17062285.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855624|gb|EHL07587.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
Length = 289
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 9/178 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL YA E +A V P R +RAI E++ A G G++ G+++++ ++ K ++L+EL+
Sbjct: 111 ALLTYAFELIAQPMSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQ 170
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
+ RL+ G ++ + G ++ GG+EE IE L Y + +GLA+Q+ DDILD + G
Sbjct: 171 VHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSETLGK 230
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++TYP LMG+AGAK K EA+ LA RA L+ LAD++ R
Sbjct: 231 PVHSDLRQHKSTYPSLMGLAGAKLELKIKTDEAHAALAVLG-ERAGFLHELADYIAQR 287
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 53/328 (16%)
Query: 25 PKVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAV 84
P+ PN H+ K Q + T+ ++ + + + Y T +IN+ L + V
Sbjct: 18 PRKTPN--VHHLSKLGIRIQCCSPTVSVSSQSKSTQFDLKTYWTTLIAEINQKLDQAIPV 75
Query: 85 PL------ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--- 135
++Y L +R +C+A+CEL GGN + P ACA EM+ T +L
Sbjct: 76 QFPEQIYEAMRYSALAKG-AKRAPPVMCVAACELFGGNRLAAFPTACALEMVHTASLIHD 134
Query: 136 -----------------------------NRALLCYAVEHMATKTKN--VSPDRLVRAIG 164
AL H+ + T V RL+R I
Sbjct: 135 DLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLRVIA 194
Query: 165 EISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED 224
EI+ AVG+ G+ AG+ +++ S ++F + + G++ E S VCG L+ G +++
Sbjct: 195 EIARAVGSTGMAAGQFLDLEG-----GPSFVEFAQEKKYGEMSECSAVCGGLLAGAEDDE 249
Query: 225 IEKLRKYGKCVGLAYQVWDDILDNM---KKKKEAGDDEATYPKLMGVAGAKRYAKELVAE 281
I++LR+YG+ VG+ YQV DD+L+ K+ +E + +Y L G+ A A+EL +
Sbjct: 250 IQRLRRYGRAVGVLYQVIDDVLEAKAMNKENEEKRRNGKSYVSLYGIEKAMEVAEELRTQ 309
Query: 282 ANQELAYFDP--TRAAPLYHLADFLVSR 307
A +EL F PLY D+ R
Sbjct: 310 AKKELDGFAKYGDSVMPLYSFVDYAADR 337
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 149/306 (48%), Gaps = 53/306 (17%)
Query: 47 NLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLC 106
+L + NN + ++ EY+ NK+ + A+ + Y G+R+ L
Sbjct: 2 SLDVFMKNNKNLVDQKLQEYLP------NKSEYP-TAIHEAMHYSVFAG--GKRLRPLLT 52
Query: 107 IASCELVGGNESSVMPLACAAEMLVTLAL------------------------------- 135
+A+ +L G N+ +++P ACA E++ T +L
Sbjct: 53 LAAGDLFGANKKTILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAIL 112
Query: 136 -NRALLCYAVEHMATK-TKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEINS-KGKDVS 191
ALL YA E M +K +N + R + AI E++ A GT+G++ G++++I S K D+
Sbjct: 113 AGDALLNYAFELMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADID 172
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----D 247
L + +I + + G L AS+ G ++ S+ D+EKL Y + +GLA+QV DDIL D
Sbjct: 173 LETVSYIHKHKTGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGD 232
Query: 248 NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
K K G D+ ATYPK+MG+ + YA L EA ++ + A L LA+
Sbjct: 233 EQKLGKTVGKDDDNEKATYPKIMGLKESHEYASRLHHEALTAISDY-GEEANILRELANK 291
Query: 304 LVSRHK 309
+V+R K
Sbjct: 292 IVNREK 297
>gi|354582557|ref|ZP_09001458.1| Polyprenyl synthetase [Paenibacillus lactis 154]
gi|353198849|gb|EHB64315.1| Polyprenyl synthetase [Paenibacillus lactis 154]
Length = 301
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 63/308 (20%)
Query: 53 NNNNPFPEIQIDEYMTLKAKKINK---ALF-EGAAVPLILQ----YPTLPNHEGERVHGT 104
NN PF +YM +++ ALF EG VP L Y + G+R+
Sbjct: 2 NNRLPF-----QQYMNDICDRLDSELTALFPEGWKVPETLHRSMTYSLMAG--GKRLRPL 54
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
L IA+CE GG+ + +P+ACA EM+ T +L
Sbjct: 55 LVIAACEAAGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDFRRGKPTNHKVFGEAAA 114
Query: 136 ---NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV 190
ALL +A + +++ + DR++ + +++ G RG++ G++ ++ +
Sbjct: 115 ILAGDALLTHAFYSIVQSSRKHGIPADRVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLT 174
Query: 191 SLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMK 250
SL +L++I + LI S++ G + G SE I+ LR +GK +GLA+Q+ DDILD +
Sbjct: 175 SLEQLEYIHLHKTSDLIMFSLMAGGRVAGCSEAQIDSLRSFGKHIGLAFQIQDDILDLIG 234
Query: 251 KKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA---YFDPTRAAPLYH 299
+ + G ++ TYP +G+ +KR + L AEA ++ + DP+R L+
Sbjct: 235 DEAKLGKPTQSDVKQEKVTYPFFIGLEASKREVERLTAEAKSAISEGNFPDPSR---LHE 291
Query: 300 LADFLVSR 307
+ADFL++R
Sbjct: 292 IADFLLAR 299
>gi|414154704|ref|ZP_11411021.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453535|emb|CCO08925.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 294
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 51/295 (17%)
Query: 61 IQIDEYMTLKAKKINKALFE----GAAVPLIL----QYPTLPNHEGERVHGTLCIASCEL 112
+ E +T A+++++AL A P +L +Y G+R+ L +A+ +
Sbjct: 1 MSFKEQLTAWARQVDEALHNYLPPADAYPAVLHEAMRYSVFAG--GKRLRPILVLAAAKA 58
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
VGGN +MP+ACA E++ T +L ALL
Sbjct: 59 VGGNTDKIMPVACALELIHTYSLVHDDLPAMDNDDYRRGRPTNHKVYGEATAILVGDALL 118
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKR 200
A E +A ++ P + R EI+ A G+RG++ G+++++ S+ K + S L++I R
Sbjct: 119 TLAFELVARCGEDCPPAAVNRVAREIAQAAGSRGLIGGQVVDLLSENKQIESSVLEYIHR 178
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAG 256
+ G L A+V G ++GG E + L Y + +GLA+Q+ DD+L D K K G
Sbjct: 179 HKTGALFRAAVRAGAILGGAGEAQLAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVG 238
Query: 257 DD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D + TYP L G+ GA+R A E EA L F P A L + F+++R
Sbjct: 239 SDIKNQKVTYPSLYGLDGARRMADEAAREAVTALNIFGP-EAEFLRLMMHFIINR 292
>gi|357038612|ref|ZP_09100409.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359404|gb|EHG07166.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
Length = 296
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 141/293 (48%), Gaps = 53/293 (18%)
Query: 65 EYMTLKAKKINKALFE-----GAAVPLI---LQYPTLPNHEGERVHGTLCIASCELVGGN 116
E + +A +++AL E G+ PLI ++Y G+R+ L +A VGG+
Sbjct: 5 EELARQANMVDEALNEYLPKAGSYPPLIHEAMRYSVFAG--GKRLRPALVLAGARAVGGD 62
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
E SV+ ACA E+L T +L ALL A
Sbjct: 63 EKSVLQAACAIELLHTYSLVHDDLPAMDNDDFRRGNPTNHKVYGEAMAVLAGDALLTLAF 122
Query: 145 EHMA--TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLR 202
+A ++T + DR+VR I E++ A GT G++ G+++++ S GK + L++I +
Sbjct: 123 GLLAGVSQTGSFGADRVVRVIAEVAEAAGTAGLIGGQVVDMQSTGKSIDKQTLEYIHVHK 182
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD 258
G L ASV G ++ G + E + L Y + +GLA+Q+ DDIL D K K G D
Sbjct: 183 TGALYRASVRTGAILAGAAPEQLYHLTVYAENLGLAFQIVDDILDIAGDEQKLGKPIGSD 242
Query: 259 ----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ATYP L G+A A+ A++ +AN LA F A L L F+++R
Sbjct: 243 TKNQKATYPALHGLAAARSIARQAAEQANGALASFG-AEADFLRGLVCFVINR 294
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 55/295 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + Y T IN+ L E AVP+ ++Y L +R +C+A+CE
Sbjct: 40 KFDLKTYWTTLIVDINQKLDE--AVPVKYPNQIYEAMRYSVLAKG-AKRSPPIMCVAACE 96
Query: 112 LVGGNESSVMPLACAAEML------------------------------VTLAL--NRAL 139
L GGN + P ACA EM+ V +A+ AL
Sbjct: 97 LFGGNRLAAFPTACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDAL 156
Query: 140 LCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
+H+ + T + V DR++R I EI+ AVG+ G+ AG+ +++ V DF
Sbjct: 157 FPLGFQHIVSHTPSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLEGGPNAV-----DF 211
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMK---KKKE 254
++ + G++ E S VCG L+ G S+E+I+ +RKYG+ VG+ Y+V DDIL+ K K +
Sbjct: 212 VQEKKYGEMGECSAVCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKKTEDKTEG 271
Query: 255 AGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADFLVSR 307
+Y + G+ A + A++L A+A +EL + + PLY D+ R
Sbjct: 272 KKKKGKSYVSVYGIEKAVKVAEDLRAQAKRELVGLEKYGDKVMPLYSFLDYAADR 326
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 41/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VGGN VMP+ACA E++ T +L
Sbjct: 44 GKRLRPILVLAATQAVGGNTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL A E +A T++ DR+ + EI+ A G+ G++ G++++I S
Sbjct: 104 VYGEAMAILVGDALQTLAFELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILS 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ +D+ L++I R + G L AS+ G ++GG + + L Y + +GLA+Q+ DD+
Sbjct: 164 ENRDIDGDTLEYIHRHKTGALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDL 223
Query: 246 L----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
L D K K G D ++TYP + G+ AKR A E AEA + F+ +A L
Sbjct: 224 LDIEGDEAKIGKPVGSDIKNQKSTYPSIYGIEEAKRMATEAAAEAVNAIKIFNH-KAEFL 282
Query: 298 YHLADFLVSR 307
+ F+++R
Sbjct: 283 QDIMHFIINR 292
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 126/254 (49%), Gaps = 43/254 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV LC+A+ E VG + ++P+A A E + T +L
Sbjct: 63 GKRVRPILCLAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHK 122
Query: 136 ----------NRALLCYAVEHMAT--KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
LL +A E +A P +R + +++AVG RG++ G++++I
Sbjct: 123 KFGEAAAILAGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDI 182
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++G+ + L EL I R + G LI A+V G + GG SE ++ L +YG+ GLA+Q+ D
Sbjct: 183 EAEGRRLELDELQQIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVD 242
Query: 244 DIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+L D K AG D +ATYP L+G+ + A+E VA A L FD RA
Sbjct: 243 DLLNVTSDTATLGKAAGSDAARGKATYPALLGLEATEDKAREAVAAAVAALESFD-HRAE 301
Query: 296 PLYHLADFLVSRHK 309
PL LA ++ SR K
Sbjct: 302 PLRELARYIHSRKK 315
>gi|374296391|ref|YP_005046582.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
gi|359825885|gb|AEV68658.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
Length = 296
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 45/263 (17%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+R+ L +A C+++GG+ V+P ACA EM+ T +L
Sbjct: 36 MRYSLLAG--GKRLRPVLSLAVCDMLGGDLKEVLPYACAVEMIHTYSLIHDDLPSMDNDD 93
Query: 136 --------------------NRALLCYAVEHMATKTKNV--SPDRLVRAIGEISSAVGTR 173
LL A E M T + + + V+A+G I+ + G R
Sbjct: 94 YRRGKLTNHKVFGEALAILAGDGLLNMAFELMLENTSSNCNNIENKVKAMGYIAKSSGVR 153
Query: 174 GVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGK 233
G++ G++++I S+ +VS+ L+++ RL+ G LI+ASV+ +I S EDI+ L Y +
Sbjct: 154 GMIGGQVVDIESENNEVSVETLEYMHRLKTGALIKASVISAAIICNASNEDIQNLENYAE 213
Query: 234 CVGLAYQVWDDILD---NMKK-KKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQE 285
+GLA+Q+ DDILD N+ K K G D + TY + G+ +K+ E+ A +
Sbjct: 214 GIGLAFQIKDDILDVEGNIDKLGKNVGSDASNKKTTYVSIYGLEKSKQMLTEITESAIKS 273
Query: 286 LAYFDPTRAAPLYHLADFLVSRH 308
L F +AA L LA++LV R
Sbjct: 274 LDSF-GGKAAFLKELAEYLVIRE 295
>gi|449017049|dbj|BAM80451.1| geranylgeranyl diphosphate synthase, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 388
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 127/255 (49%), Gaps = 46/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L +A+C + GG + MP A A EM+ T++L
Sbjct: 133 GKRVRPALVLAACRMFGGVDEQAMPTAVAVEMVHTMSLIHDDLPAMDNDDFRRGRPTNHK 192
Query: 136 ----------NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A +A KT V P R + I + + VG G+ AG+ +++
Sbjct: 193 VYGEEVAILAGDALLSEAFSQIAEKTPATLVPPSRTLEVIRRLGNCVGLHGLAAGQALDL 252
Query: 184 NSKGK---DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQ 240
++GK ++SL L+ I + L+ S+ G ++ G S +DI+ + + +GLA+Q
Sbjct: 253 EAEGKPADEISLRMLETIHLYKTAALLRFSITAGAILAGASVDDIDCMESFANKIGLAFQ 312
Query: 241 VWDDILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPT 292
V DD+LD K AG D +AT+P+++G+ +++YA++LV EA ELA +
Sbjct: 313 VADDVLDVTATTETLGKTAGKDVAAEKATFPRILGLEESRKYAEDLVKEAKGELAKYG-D 371
Query: 293 RAAPLYHLADFLVSR 307
RA+ L ADF++ R
Sbjct: 372 RASLLLGFADFIIQR 386
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 50/266 (18%)
Query: 90 YPTLPNHE--------GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------ 135
YP L +H G+R+ L +A E VGGN + V+P ACA E++ T +L
Sbjct: 29 YPPLIHHAMRYSVLGGGKRLRPALVMAGAEAVGGNAADVLPAACAVELIHTYSLVHDDLP 88
Query: 136 --------------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSA 169
ALL A E +A + P+ +VR I E ++A
Sbjct: 89 AMDNDDYRRGRLTNHKVYGEAAAILAGDALLTLAFELLANNDR-ARPENIVRVIREAAAA 147
Query: 170 VGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLR 229
GT G++ G++++ S GK++ S L++I R + G L SV G ++ G EE + L
Sbjct: 148 AGTMGLIGGQVVDTFSAGKEIDESTLEYIHRHKTGALYRFSVRAGAMLAGAQEEQLASLT 207
Query: 230 KYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAE 281
Y + +GLA+Q+ DDILD +K+ G + ++TYP L G+ +++ A++ V
Sbjct: 208 AYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSDVRNRKSTYPSLFGMEYSRKKARQAVEM 267
Query: 282 ANQELAYFDPTRAAPLYHLADFLVSR 307
A L F A L LA F++ R
Sbjct: 268 AKAALQPFG-GEADFLRMLAQFVIDR 292
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 49/237 (20%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCI+SCELVGG+ +P+ACA E + T +L
Sbjct: 42 GKRLRPVLCISSCELVGGDRDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 136 ----------NRALLCYAVE---HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
ALL Y E H A + N ++RA EI+ A G G++ G++++
Sbjct: 102 VYGEALAILAGDALLNYGFEVLIHHALDSANCQ--NILRATEEIAHAAGCHGMIGGQVVD 159
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ S+ K+++ EL F+ + G LI+ASVV G ++GG +E I+KL Y + +GLA+Q+
Sbjct: 160 LLSENKNITEEELKFMHDHKTGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIK 219
Query: 243 DDILD----------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYF 289
DDILD N+K E G ++T+ + G+ + KEL A A + L F
Sbjct: 220 DDILDVLGDESKLGKNVKSDLENG--KSTFVSVFGLQRSISLVKELTASAIRILDDF 274
>gi|392394416|ref|YP_006431018.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525494|gb|AFM01225.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 289
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL YA E +A V P R +RAI E++ A G G++ G+++++ ++ K ++LSEL+
Sbjct: 111 ALLTYAFELLAQPMGGVEPQRQLRAIREVAQAAGPAGMVGGQVLDLEAEEKQLNLSELEQ 170
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
+ RL+ G ++ S G ++ GG+EE I+ L +Y + +GLA+Q+ DDILD + G
Sbjct: 171 VHRLKTGAMLVVSARLGAILAGGTEEKIDALTRYAQAIGLAFQIKDDILDLESDSETLGK 230
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++TYP LMG+ GAK K EA+ L RA L+ AD++ R
Sbjct: 231 PVHSDLRQHKSTYPSLMGLEGAKLELKVKTDEAHAALEVLGE-RAGFLHEFADYIAQR 287
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 142/299 (47%), Gaps = 53/299 (17%)
Query: 61 IQIDEYMTLKAKKINKAL------FEGAAVPLI--LQYPTLPNHEGERVHGTLCIASCEL 112
+ I +Y+ + +++ +AL EG + ++Y L G+R+ LC+A+ E
Sbjct: 1 MDIKQYLNHRCQEVEQALDQLLPPIEGPLAGHVEAMRYSLLAG--GKRIRPILCLAAAEA 58
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
+ + ++P+A A E + T +L LL
Sbjct: 59 LPTDSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLL 118
Query: 141 CYAVEHMAT--KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
+A E +A TKN+S + IG I++A+G G++ G++++I ++G+ + L +L I
Sbjct: 119 SFAFELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQI 178
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKE 254
R + G LI +V G + GG E L YG+ +GLA+Q+ DD+L D+ K
Sbjct: 179 HRCKTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKA 238
Query: 255 AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
AG D +ATYP L+G+ +R A E VA A L F A PL LA ++ +R K
Sbjct: 239 AGSDAARGKATYPALLGLEATRRQADEAVAGAITALNGFG-EEAEPLRELARYIAARRK 296
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 9/178 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL YA E +A V R +RA+ E++ A G G++ G+++++ ++ K ++L+EL+
Sbjct: 112 ALLTYAFELLAQPMSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQ 171
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
+ RL+ G ++ + G ++ GG+EE IE L Y + +GLA+Q+ DDILD + G
Sbjct: 172 VHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSETLGK 231
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++TYP LMG+AGAK K EA+ LA RA L+ LAD++ R
Sbjct: 232 PVHSDLRQHKSTYPSLMGLAGAKLELKIKTDEAHAALAVL-GERAGFLHELADYIAQR 288
>gi|328952416|ref|YP_004369750.1| farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
Length = 296
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 125/254 (49%), Gaps = 43/254 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+ E V GN VMP+A A EM+ T +L
Sbjct: 44 GKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDLPAMDDDDFRRGRPTCHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLV--RAIGEISSAVGTRGVLAGRIMEI 183
LL A E +A N V + I+ A G +G++ G++ ++
Sbjct: 104 KFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIARAAGYQGMVGGQMADL 163
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++G+ +L +++ I RL+ G L+ ASV G L+GGGS DI L YG+ GL +Q+ D
Sbjct: 164 LAEGQPSTLEQVEAIHRLKTGALLTASVRSGALLGGGSARDILALTHYGEKFGLIFQITD 223
Query: 244 DILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD + E G +ATYP +MGVA AK A++LVA A +L F RA
Sbjct: 224 DLLDVEGESAEMGKPTGMDAIRQKATYPAVMGVAAAKNQARDLVAAALVDLQPFG-ERAE 282
Query: 296 PLYHLADFLVSRHK 309
PL LA +L+ R +
Sbjct: 283 PLRQLARYLLVRRQ 296
>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 147
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 79/106 (74%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL + EH+AT TK VS DR+VR IGE++ +VG+ G++AG++++I S+G DV L L++
Sbjct: 42 ALLSLSFEHIATATKGVSKDRIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEY 101
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
I + L+E+SVV G ++GGGS++ IEKLRK+ + +GL +QV D
Sbjct: 102 IHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVD 147
>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
Length = 333
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 86/136 (63%), Gaps = 8/136 (5%)
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQ 240
+E+ + V L L++I + L+EASVV G ++GGGS+E IE LR Y + +GL +Q
Sbjct: 197 LEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQ 256
Query: 241 VWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPT 292
V DDILD K +E G D+ TYPKL+G+ ++ +A++L+++A ++L+ FD
Sbjct: 257 VVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQE 316
Query: 293 RAAPLYHLADFLVSRH 308
AAPL HLA+++ R
Sbjct: 317 TAAPLLHLANYIAYRQ 332
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPD--------RLVRAIGEISSAVGTRGVLAGRIMEINSKG-- 187
ALL + HMA + + PD R+VRAIGE++ +G+ G++AG+++++ G
Sbjct: 82 ALLSLSFHHMA-RFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGST 140
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ V L L++I + L+EASVV G ++GGGS+E IE LR Y + +GL +QV D
Sbjct: 141 ETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVD 196
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 144/304 (47%), Gaps = 58/304 (19%)
Query: 53 NNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYP---------TLPNHEGERVHG 103
+ N+ + + Y +IN+ L + A+P+ QYP ++ +R
Sbjct: 4 SGNSKSTQFDLKTYWMTLISEINQKLDQ--AIPI--QYPEEIYEAMRYSVLAKRTKRAPP 59
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------------- 135
+CIA+CEL GGN + P ACA EM+ +L
Sbjct: 60 VMCIAACELFGGNRLAAFPTACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDK 119
Query: 136 ----NRALLCYAVEHMATKT-KNVSPD-RLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
AL H+ + T ++ P+ RL+R I EI+ AVG+ G+ AG+ +++
Sbjct: 120 AILAGDALFPLGFRHIVSNTPSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEG---- 175
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD-- 247
SL+ +F++ + G++ E S VCG L+ G +++I++LR+YG+ VG+ Y+V DD+L+
Sbjct: 176 -SLNSAEFVQEKKYGEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLEAK 234
Query: 248 --NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADF 303
+ + ++ +Y L GV A A+EL +A +EL F+ PLY+ D+
Sbjct: 235 SMSKEDEENEKKKAKSYVSLYGVEKAVEVAEELRTKAKKELDGFEKYGESVQPLYNFVDY 294
Query: 304 LVSR 307
R
Sbjct: 295 AADR 298
>gi|423090783|ref|ZP_17079069.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
gi|357555898|gb|EHJ37520.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
Length = 295
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 125/251 (49%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +C++VGGNE +P A A EM+ T +L
Sbjct: 44 GKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL YA E M + N +P++ ++AI EI+ G G++ G+++++
Sbjct: 104 VYGEAMGILAGDALLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ K + +LD+I + ++ ++ G IGG + E +E++ KY K +GL++Q+ DD
Sbjct: 164 SENKQIEKEKLDYIHMNKTAAMMVGCMIAGATIGGANSEQMEEITKYAKNIGLSFQIVDD 223
Query: 245 IL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
IL D K K+ G D ++TYP L+G+ +K A L+ EA + +
Sbjct: 224 ILDIVGDEAKLGKKVGSDIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL-SDDVDF 282
Query: 297 LYHLADFLVSR 307
L LA++++ R
Sbjct: 283 LKGLAEYIIDR 293
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 49/277 (17%)
Query: 76 KALFEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL 133
K+ F+ P IL L + G+R+ LCIAS E G E+ ++P A A E + T
Sbjct: 21 KSYFQTFPTPPILHDSVLYSLTAGGKRLRPILCIASYEACDGMEN-IVPYATAIEFIHTY 79
Query: 134 AL--------------------------------NRALLCYAVEHMATKT-KNVSPDRLV 160
+L LL A ++ K N+S + L+
Sbjct: 80 SLIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSNKDYANISSNTLL 139
Query: 161 RAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG 220
+ I EIS A G RG++AG+ ++ S+GK+ ++FI + +I+ASV G ++
Sbjct: 140 KVISEISKAAGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVKVGAILAEA 199
Query: 221 SEEDIEKLRKYGKCVGLAYQVWDDILD------NMKKKKEAGDD----EATYPKLMGVAG 270
SEE I+ L YG+ +GLA+Q+ DDILD M K K G D + TYP++ G+
Sbjct: 200 SEEKIKNLEIYGQSIGLAFQIVDDILDIEGTTEAMGKPK--GSDIEKGKMTYPRVFGIEK 257
Query: 271 AKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+K+ AKEL+ +A + L F+ +A PL +A +++ R
Sbjct: 258 SKQKAKELIDKALESLTMFN-HKAEPLREIAHYIIKR 293
>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 135/263 (51%), Gaps = 42/263 (15%)
Query: 85 PLI--LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------- 135
PL+ ++Y + G+R+ LC+A EL GG+ +V+ ACA E + T +L
Sbjct: 33 PLVASMEYSLMAG--GKRLRPVLCLAWAELAGGSVHAVLDFACAIECIHTYSLIHDDLPA 90
Query: 136 -----------------NRALLCYAVEHMATKTKNVS------PDRLVRAIGEISSAVGT 172
+ A A + + T+ ++ P+R+++A+ +S+A G
Sbjct: 91 MDDDDLRRGKPSNHKRFDEATAILAGDGLLTEAFTLASSLELRPERILKAVFHLSTAAGP 150
Query: 173 RGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYG 232
RG++ G+++++ GK SL +L + + G LIE S V G ++GGG + + K +YG
Sbjct: 151 RGMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCVLGGGDDSEQAKASEYG 210
Query: 233 KCVGLAYQVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQ 284
+ +GLA+QV DDILD + + K G D A TYP L+G+ ++ A++ V +A
Sbjct: 211 RAIGLAFQVTDDILDVIGDEAALGKPVGSDVAQGKSTYPALLGIDQSRVLARQSVDQALA 270
Query: 285 ELAYFDPTRAAPLYHLADFLVSR 307
LA F RA L +A +++ R
Sbjct: 271 ALAGFSHPRADFLRAVALYILDR 293
>gi|451982552|ref|ZP_21930861.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
gi|451760198|emb|CCQ92154.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
Length = 296
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 132/279 (47%), Gaps = 55/279 (19%)
Query: 83 AVPLILQYP-TLPN--HE---------GERVHGTLCIASCELVGGNESSVMPLACAAEML 130
A+PL L P T P HE G+R+ TL IA+ E VGG+ V+P A AAE L
Sbjct: 17 AIPLFLPEPDTYPVSIHESMHYSLSAGGKRLRPTLLIAATEAVGGSRKDVLPFAVAAEFL 76
Query: 131 VTLAL--------------------------------NRALLCYAVEHM--ATKTKNVSP 156
T L ALL A M A + +
Sbjct: 77 HTYTLIHDDLPALDNDSLRRGKPTNHKVFGEAIAILAGDALLTQAFVLMTNAFLMEAIPH 136
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
+ ++RA E++ A+ + GV+ G+++++ S+GK + S L++I + G ++ V G +
Sbjct: 137 ENILRASHEMAQALSSTGVIGGQVVDLESEGKPIEASTLEYIHIYKTGFFFKSCVRVGAI 196
Query: 217 IGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDD--------EATYPKLMGV 268
+G + + + ++G +GLA+Q+ DDILD + K + G D +ATYP L G+
Sbjct: 197 LGRADSQQLGAISRFGAHIGLAFQIIDDILDIVGDKAKIGKDVGSDVSKNKATYPALFGL 256
Query: 269 AGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+++ A LV EA L FD RA PL +A F V R
Sbjct: 257 EESRKKADSLVEEAITCLKDFD-ERANPLRDIALFFVQR 294
>gi|366166849|ref|ZP_09466604.1| farnesyl-diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 44/254 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A CEL+GG+ + VMP ACA EM+ T +L
Sbjct: 44 GKRLRPVLALAVCELLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHK 103
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPD-RLVRAIGEISSAVGTRGVLAGRIME 182
LL A E M +T T N + + V+A+ I+ + G G++AG++++
Sbjct: 104 KFGEAIAILAGDGLLNLAFELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVID 163
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
S+ K+V+ L+++ + + G LI+A VV +I SEED+ L Y +GLA+Q+
Sbjct: 164 TESENKEVAYETLEYMHKCKTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIK 223
Query: 243 DDILD----NMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD K K+ G DE+ TY L G+ +K+ +E EA + + F P A
Sbjct: 224 DDILDVEGSTEKLGKKVGSDESNKKTTYVSLYGLEKSKQMLRETTEEAIKNIGKFGPN-A 282
Query: 295 APLYHLADFLVSRH 308
L LA++L+ R
Sbjct: 283 NFLRELAEYLIVRE 296
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392941055|ref|ZP_10306699.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392292805|gb|EIW01249.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 294
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 128/258 (49%), Gaps = 55/258 (21%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC++SCEL+GG+ +P+ACA E++ T +L
Sbjct: 42 GKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 136 ------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLA 177
L+ +A+EH +R+++A EI++A G +G++
Sbjct: 102 VYGEAIAILAGDGLLNLGYEVLVRHALEHPE------DYERILKATNEIATASGCKGIIG 155
Query: 178 GRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
G++++I S+ +++ EL F+ + G LIEASV G I G +EE+I LR+Y + +G
Sbjct: 156 GQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIAGATEEEIHALREYARLIGF 215
Query: 238 AYQVWDDILDNM----KKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYF 289
A+Q+ DDILD + K K+ G D+ T+ + G+ ++ EL A + L F
Sbjct: 216 AFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRF 275
Query: 290 DPTRAAPLYHLADFLVSR 307
+A L L+++L+ R
Sbjct: 276 GE-KAEFLKELSNYLIER 292
>gi|390935023|ref|YP_006392528.1| polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570524|gb|AFK86929.1| Polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 293
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 144/293 (49%), Gaps = 51/293 (17%)
Query: 63 IDEYMTLKAKKINKALFEGAAV---PLIL----QYPTLPNHEGERVHGTLCIASCELVGG 115
D+ + K + INK L E ++ P +L +Y G+R+ LCI++CELVGG
Sbjct: 2 FDDILREKIEYINKGLNEFLSLTDRPEVLFEAMRYSVFAG--GKRLRPVLCISTCELVGG 59
Query: 116 NESSVMPLACAAEMLVTLAL--------------------------------NRALLCYA 143
N+ + +ACA E + T +L ALL Y
Sbjct: 60 NKEDALAVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYG 119
Query: 144 VEHMATKTKNVSPDR-LVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLR 202
E + + N S + +++A EI+ A G RG++AG+++++ S+ +++ + +L F+ +
Sbjct: 120 FEVLIQQALNSSKSQNILKAADEIARAAGCRGMIAGQVVDLLSENREIGVDDLKFMHDHK 179
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD 258
G LI AS++ G ++GG ++ ++KL Y + +G A+QV DDIL D MK K+ G D
Sbjct: 180 TGALIRASILAGAIMGGADDDTLKKLSSYAEYLGFAFQVKDDILDILGDEMKIGKDIGSD 239
Query: 259 ----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++T+ ++G+ + EL +A L F + L +L ++ R
Sbjct: 240 MVNGKSTFVSVLGLQRSVDLINELTEKAINILDGF-GEKGEFLKNLTQYMAER 291
>gi|338812850|ref|ZP_08625003.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
gi|337275149|gb|EGO63633.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
Length = 295
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 47/272 (17%)
Query: 80 EGAAVPLILQ---YPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL- 135
+G P+IL+ Y G+R+ L +A+ + V G +A EM+ T +L
Sbjct: 27 QGQYPPVILEAMRYSVFAG--GKRMRPVLLMAAADAVNGRGEEYTHVAAGLEMIHTYSLI 84
Query: 136 -------------------------------NRALLCYAVEHMATKTKNVSPDRLVRAIG 164
ALL YA E M + +V D L+R I
Sbjct: 85 HDDLPAMDDDDYRRGKPTNHKVYGEAMAILAGDALLTYAFEVMG-RQPDVLSDVLLRVIA 143
Query: 165 EISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED 224
EI++AVG G++ G+ M++ S+GK + L E++++ + + G L +AS+ G ++ G EE
Sbjct: 144 EIAAAVGPLGMVGGQAMDLFSEGKQIGLQEIEYLHKAKTGALFKASIRAGAMLAGAGEEQ 203
Query: 225 IEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAK 276
++ L +Y GLA+Q+ DDILD + E G + +ATY L V AK A
Sbjct: 204 LQDLTQYSDYFGLAFQITDDILDVTGNQAELGKPVGSDSKNQKATYVSLYSVDKAKSIAG 263
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
E V A L +F P A L LA +L+SR+
Sbjct: 264 EAVDGALNTLKFFGP-EADILRDLAKYLLSRN 294
>gi|67008257|emb|CAJ00342.1| putative geranylgerannylpyrophosphate synthase [Andrographis
paniculata]
Length = 141
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL +A EH+AT T++V + +V AIGE+S +G G++AG++++I S+G +V L L+
Sbjct: 23 ALLAFAFEHLATATEDVPTNMVVSAIGELSRCIGAEGLVAGQVVDICSEGISEVGLELLE 82
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE 254
FI + L+E SVV G ++GG +E ++E+LRK+ +C+GL +QV DDILD K +E
Sbjct: 83 FIHLHKTAALLEGSVVLGAILGGATESEVERLRKFARCIGLLFQVVDDILDVTKCSEE 140
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|413947066|gb|AFW79715.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 173/344 (50%), Gaps = 70/344 (20%)
Query: 32 KASHVPKSSSLDQAENLTIK--------SNNNNPFPEIQIDE--------YMTLKAKKIN 75
K+ HV +S SL EN ++ ++ +D Y++ KA+ ++
Sbjct: 20 KSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIVDVAVDSGTSFDFESYLSAKARAVH 79
Query: 76 KAL---FEGAAVPLIL----QYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAE 128
AL +G P +L +Y L G+R+ L IA+CELVGG ++ +P+ACA E
Sbjct: 80 DALDLTLQGLRCPEVLSESMRYSVLAG--GKRLRPVLAIAACELVGGTAAAAVPVACAVE 137
Query: 129 MLVTLAL---------NRAL-----------------------LCYAVEHMATKT--KNV 154
M+ T +L + AL L A EH+A + V
Sbjct: 138 MIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGV 197
Query: 155 SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK---DVSLSELDFIKRLRCGKLIEASV 211
DR +RA+ E+ S G G+ AG++ ++ S+G VSL L++I + +L+EA+
Sbjct: 198 PADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLGALEYIHVHKTARLVEAAA 257
Query: 212 VCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDD----EATYP 263
V G ++GGG + ++E++R+Y +GL QV DD+LD + + K AG D +ATYP
Sbjct: 258 VSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYP 317
Query: 264 KLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+LMG+ GA+ Y EL+A+A EL D R APL HLA F+ R
Sbjct: 318 RLMGLKGARAYMGELLAKAEAELDGLDAARTAPLRHLARFMAHR 361
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|384360393|ref|YP_006198245.1| geranyltranstransferase [Clostridium difficile BI1]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile 630]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +C++VGGNE +P A A EM+ T +L
Sbjct: 44 GKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL YA E M + N +P++ ++AI EI+ G G++ G+++++
Sbjct: 104 VYGEAMGILAGDALLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ K + +LD+I + ++ + G IGG + E +E++ KY K +GL++Q+ DD
Sbjct: 164 SENKQIEKEKLDYIHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDD 223
Query: 245 IL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
IL D K K+ G D ++TYP L+G+ +K A L+ EA + +
Sbjct: 224 ILDIVGDEAKLGKKVGSDIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL-SDDVDF 282
Query: 297 LYHLADFLVSR 307
L LA++++ R
Sbjct: 283 LKGLAEYIIDR 293
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 43/254 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ S E VGGN+ VM +A A E + T +L
Sbjct: 55 GKRLRPILCMTSAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHK 114
Query: 136 ----------NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
LL A E ++ + + ++++ I IS A G G++ G++++I
Sbjct: 115 AFDEATAILAGDGLLTSAFEILSHAADDGLLPAEKVLTIIAGISHAAGCNGMILGQMLDI 174
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ + ++ EL+ I + G +IE SV G +GGG+ E I L Y K VGLA+QV D
Sbjct: 175 EGEHESLTREELEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVID 234
Query: 244 DILDNMKKKKEAG-----DDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL+ + K G D E +TYP LMG+ GA+ +A+ L+ +A Q + FD +
Sbjct: 235 DILNVIGDPKVMGKAVGTDAELGKSTYPALMGLDGAQDFAERLINKALQAIVSFD-NKCD 293
Query: 296 PLYHLADFLVSRHK 309
PL +A ++++R +
Sbjct: 294 PLRSIATYILTRSR 307
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +C++VGGNE +P A A EM+ T +L
Sbjct: 44 GKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL YA E M + N +P++ ++AI EI+ G G++ G+++++
Sbjct: 104 VYGEAMGILAGDALLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ K + +LD+I + ++ + G IGG + E +E++ KY K +GL++Q+ DD
Sbjct: 164 SENKQIEKEKLDYIHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDD 223
Query: 245 IL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
IL D K K+ G D ++TYP L+G+ +K A L+ EA + +
Sbjct: 224 ILDIVGDESKLGKKVGSDIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL-SDDVDF 282
Query: 297 LYHLADFLVSR 307
L LA++++ R
Sbjct: 283 LNGLAEYIIDR 293
>gi|374639383|gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 55/307 (17%)
Query: 49 TIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGER 100
TI+ + + P + Y T K+I++ L E A+P+ ++Y L +R
Sbjct: 26 TIRCSAASVSPGFDLKTYWTSLIKEIDQKLDE--AIPVKYPQQIYEAMRYSVLAKG-AKR 82
Query: 101 VHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------------- 135
+C+A+CE+ GGN + P ACA EM+ + +L
Sbjct: 83 APPVMCVAACEIFGGNRLAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHTVFG 142
Query: 136 -------NRALLCYAVEHMA--TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
AL H+ T T V RL+R I EI+ AVG+ G+ AG+ +++
Sbjct: 143 VDMAILAGDALFPLGFRHIVSHTPTDLVPHTRLLRVIAEIARAVGSTGMAAGQFLDLEGG 202
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
V D ++ + G++ + S VCG L+ G S+++IE LRKYG+ VG+ Y+V DDI
Sbjct: 203 PNAV-----DLVQEKKFGEMGQCSAVCGGLLAGASDDEIEHLRKYGRAVGILYEVVDDIR 257
Query: 247 DNMKKKKE---AGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLA 301
+ + E + +Y + GV A A++L ++A +EL + + PLY
Sbjct: 258 ETKLQPDEKDKSKSKGKSYVSVYGVEKAMEVAEDLRSQAKKELESLEKYGDKVLPLYSFV 317
Query: 302 DFLVSRH 308
D+ R+
Sbjct: 318 DYAADRY 324
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 50/286 (17%)
Query: 63 IDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMP 122
I++++ K N L E A L+ G+RV L +A+ E+VGG V+P
Sbjct: 13 IEDFLQKLPWKANDVLSESMAYTLM--------AGGKRVRPVLALAAAEIVGGAPEVVIP 64
Query: 123 LACAAEMLVTLAL--------------------------------NRALLCYAVEHMATK 150
AC EM+ T +L LL Y + +A+
Sbjct: 65 CACGLEMIHTYSLIHDDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASD 124
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEAS 210
V +R ++ I E + AVG +G++ G++++ + ++S+S++ I L+ G L+ AS
Sbjct: 125 VP-VPLERQIKVIRETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTAS 183
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDD----EATY 262
V G ++GGG EE+I +L Y +GLA+Q+ DDILD + K G D ++TY
Sbjct: 184 VRLGAILGGGLEEEIRQLSIYAAALGLAFQIKDDILDIEGTEDALGKPVGSDLKLQKSTY 243
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
P ++G+ GAK K+ + EA L F+ +A L AD++ +R+
Sbjct: 244 PSILGMDGAKIQLKQKIIEAKTALEKFEE-KAEFLLCFADYIETRN 288
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 141/320 (44%), Gaps = 81/320 (25%)
Query: 36 VPKSSSLDQAENL--TIKSNNNNPFPEIQID--EYMTLKAKKINKALFEGAAVPL----- 86
+P SSL+ + T S + +P +Q D Y T +IN L E A+P+
Sbjct: 276 LPNRSSLNLPRTIRCTSPSISVSPSKSMQFDLRSYWTTLISEINTKLEE--AIPVKYPQQ 333
Query: 87 ---ILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML------------- 130
++Y L G+R +C+A CEL GG+ + P ACA EM+
Sbjct: 334 IYEAMRYSVLAK-GGKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCM 392
Query: 131 -----------------VTLAL--NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSA 169
V +A+ AL H+ + T + V +L+R I EI+ +
Sbjct: 393 DDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARS 452
Query: 170 VGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLR 229
VG+ G+ AG+ +++ V DF++R + G++ E S VCG +GG +++DI +LR
Sbjct: 453 VGSTGMAAGQFLDLEGAPNSV-----DFVQRKKFGEMAECSAVCGGFLGGAADDDILRLR 507
Query: 230 KYGKCVGLAYQVWDDILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYF 289
+YG+ VG+ YQV DD A A+EL A+A +EL+ F
Sbjct: 508 RYGRAVGMLYQVVDD-------------------------KAMEVAEELRAKAKRELSGF 542
Query: 290 DP--TRAAPLYHLADFLVSR 307
D PLY DF R
Sbjct: 543 DKYGDSVVPLYSFVDFAAER 562
>gi|405354222|ref|ZP_11023602.1| Octaprenyl-diphosphate synthase [Chondromyces apiculatus DSM 436]
gi|397092465|gb|EJJ23223.1| Octaprenyl-diphosphate synthase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 310
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 33/223 (14%)
Query: 97 EGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------- 135
+G+R+ LC+ +CE VGG+ + +P ACA EM+ ++L
Sbjct: 56 DGKRLRPILCLEACEWVGGSLKAALPAACAIEMIHKMSLVHDDLPAMDDAETRNGRPALH 115
Query: 136 -----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL +A +A+ + V +R++ AI + A+GT G+ G+ +++
Sbjct: 116 KVHGEALAILAGDALLVHAFGLLAS-IRAVPAERVLGAISRLCQALGTAGLAGGQALDVL 174
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ +DV+ +LD + + EA++V G +GG +E L +YGK +G A+Q+ DD
Sbjct: 175 SQSEDVTPEKLDHVHTWKTASFFEAAMVIGAEVGGADASQVEALARYGKLLGRAFQISDD 234
Query: 245 ILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELA 287
+LD K A + Y +L GV GA+R +EL+ +A LA
Sbjct: 235 LLDARDVKALAHGEATNYVQLHGVDGARRKLRELLDQAVSALA 277
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 47/291 (16%)
Query: 63 IDEYMTLKAKKINKALF---EGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNE 117
++E++T + + I LF + +P L+ L + + G+R+ L +A G NE
Sbjct: 5 LNEFLTTRKQTIEDYLFTYVQELTIPKDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNE 64
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
+P+ CA EM+ T +L ALL +
Sbjct: 65 EDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFR 124
Query: 146 HMATK-TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCG 204
+ ++ + +VS D+ +R + E+ + G G++ G+ ++ ++ K VSL+EL++I + G
Sbjct: 125 LITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELEYIHARKTG 184
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA 260
KL+ SV G ++ G S++DIEKLR++ +G+A+Q+ DDILD K K G D A
Sbjct: 185 KLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTA 244
Query: 261 ----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYP L+ ++GAK E + A + ++ + L+ L D + SR
Sbjct: 245 NEKSTYPSLLTLSGAKEKLDEHITRAKEIVSNLQLEQQL-LHGLCDLIASR 294
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 43/254 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCIA E VGG V+P+ACA E++ T +L
Sbjct: 50 GKRLRPILCIAGAEAVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHK 109
Query: 136 ----------NRALLCYAVEHMAT--KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
LL A M + T+N+ P L+ I I+ A G G++ G++++I
Sbjct: 110 VFGEAIALLAGDGLLTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDI 169
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+GK+ + F+ + G +I ASV+ G + G E ++ YG +GLA+Q+ D
Sbjct: 170 LWEGKNAEFETVKFLHTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISD 229
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D+ K AG DE TYP ++G+ +K+ + LV +A Q+L F A
Sbjct: 230 DILDVEGDSEIMGKMAGADEGKGKTTYPSVLGMDESKKIQEALVRDAVQDLEVFGDA-AE 288
Query: 296 PLYHLADFLVSRHK 309
PL +A +++ R K
Sbjct: 289 PLRKIAYYIIERKK 302
>gi|423082397|ref|ZP_17070989.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
gi|423087809|ref|ZP_17076195.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357544123|gb|EHJ26129.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357548723|gb|EHJ30583.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
Length = 295
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +C++VGGNE +P A A EM+ T +L
Sbjct: 44 GKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL YA E M + N +P++ ++AI EI+ G G++ G+++++
Sbjct: 104 VYGEAMGILAGDALLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ K + +LD+I + ++ + G IGG + E +E++ KY K +GL++Q+ DD
Sbjct: 164 SENKQIEKEKLDYIHMNKTAAMMVGCMRAGATIGGANFEQMEEITKYAKNIGLSFQIVDD 223
Query: 245 IL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
IL D K K+ G D ++TYP L+G+ +K A L+ EA + +
Sbjct: 224 ILDIVGDEAKLGKKVGSDIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL-SDDVDF 282
Query: 297 LYHLADFLVSR 307
L LA++++ R
Sbjct: 283 LKGLAEYIIDR 293
>gi|12231186|dbj|BAB20977.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 126
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 76/100 (76%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL ++ EH+AT TK VS DR++RAIGE++ +G+ G++AG+++++ S+G DV L L+F
Sbjct: 26 ALLSFSFEHIATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDVCSEGADVGLDHLEF 85
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
I + L+E SVV G ++GGGS+E+IEKLRK+ + +GL
Sbjct: 86 IHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFARSIGL 125
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 47/256 (18%)
Query: 98 GERVHGTLCIASCELVGGNESS--VMPLACAAEMLVTLAL-------------------- 135
G+R+ LC+A+ E VG + SS ++P+ACA E + T +L
Sbjct: 54 GKRIRPILCLAAAEAVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTS 113
Query: 136 ------------NRALLCYAVEHMATKTK---NVSPDRLVRAIGEISSAVGTRGVLAGRI 180
ALL A E M T+T ++P+ L+R I EI++A G G++ G++
Sbjct: 114 HKVFGDALAILAGDALLTEAFELM-TRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQV 172
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQ 240
++ ++GK +L L+ I + G +I S+ G ++ GGSE+ + L YG +GL +Q
Sbjct: 173 EDLRAEGKPGNLDTLNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQ 232
Query: 241 VWDDIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPT 292
+ DDIL D K G D + T+P LMG+ +++ A LV EA ++L FD
Sbjct: 233 IADDILNVEGDRTVLGKSTGSDASRGKMTFPLLMGLEPSRQKAFALVEEALRDLDGFD-N 291
Query: 293 RAAPLYHLADFLVSRH 308
RA PL +A + V R
Sbjct: 292 RATPLRLMARYFVERR 307
>gi|363814567|ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 44/248 (17%)
Query: 99 ERVHGTLCIASCELVGGNESSVMPLACAAEML---------------------------- 130
+R +CI++CEL GG+ + P ACA EM+
Sbjct: 91 KRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTI 150
Query: 131 --VTLAL--NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
V +A+ AL H+ ++T + V L+R I EI+ +VG+ G+ AG+ +++
Sbjct: 151 YGVDMAILAGDALFPLGFRHIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDLE 210
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
V FI+ + G++ E+S VCG + G +++IE+LR+YG+ VG+ Y V DD
Sbjct: 211 GGPNAVG-----FIQEKKFGEMGESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVVDD 265
Query: 245 ILDNMKKKKEAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYH 299
I++ K + G+ + +Y ++ GV A A+EL A+A +EL F+ R PLY
Sbjct: 266 IIEERLKVEGDGNRKNKGKSYAEVYGVEKAIEKAEELRAKAKEELDGFEKHGERVLPLYS 325
Query: 300 LADFLVSR 307
D+ R
Sbjct: 326 FVDYAFDR 333
>gi|345017599|ref|YP_004819952.1| polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032942|gb|AEM78668.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 55/258 (21%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC++SCEL+GG+ +P+ACA E++ T +L
Sbjct: 42 GKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 136 ------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLA 177
L+ +A+EH +R+++A EI++A G +G++
Sbjct: 102 VYGEAIAILAGDGLLNLGYEVLVRHALEHPE------DYERILKATNEIATASGCKGIIG 155
Query: 178 GRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
G++++I S+ +++ EL F+ + G LIEASV G I +EE+I LR+Y + +G
Sbjct: 156 GQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIASATEEEIHALREYARLIGF 215
Query: 238 AYQVWDDILDNM----KKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYF 289
A+Q+ DDILD + K K+ G D+ T+ + G+ ++ EL A + L F
Sbjct: 216 AFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRF 275
Query: 290 DPTRAAPLYHLADFLVSR 307
+A L L+++L+ R
Sbjct: 276 GE-KAEFLKELSNYLIER 292
>gi|373115249|ref|ZP_09529425.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670541|gb|EHO35620.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 293
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 43/262 (16%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+R+ L + +C L GG +P A A EM+ T +L
Sbjct: 35 MRYSLLTG--GKRLRPVLVLEACRLCGGAVEDALPFAGAIEMVHTYSLIHDDLPCMDDDD 92
Query: 136 --------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
LL A E M + + P+R++ A G ++ A G RG+
Sbjct: 93 LRRGRPTNHKVFGEANAVLAGDGLLTAAFETMLAPGQKLPPERVLEAAGILARAAGGRGM 152
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCV 235
+ G+++++ +G+ + L+E++ ++RL+ G LI A+V G + GG+EE E L +Y C+
Sbjct: 153 VGGQVLDMAGEGRALGLTEVEELQRLKTGALIRAAVEMGCAVAGGAEEQREALCRYADCL 212
Query: 236 GLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
GLA+Q+ DDILD + + G D+ T+ L G+A + EL A + LA
Sbjct: 213 GLAFQIQDDILDVVGDEATLGKPIGSDVRSDKTTFVALKGLADCRILVAELTDRAVEALA 272
Query: 288 YFDPTRAAPLYHLADFLVSRHK 309
F + A L LA L R K
Sbjct: 273 PFG-SEAESLRGLAQSLAGREK 293
>gi|374993734|ref|YP_004969233.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
gi|357212100|gb|AET66718.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
Length = 288
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 41/232 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +AS E VGG +++ A A E++ T +L
Sbjct: 39 GKRIRPVLALASAETVGGKPEAILQAAVALELIHTYSLIHDDLPAMDNDDYRRGRLSNHK 98
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E + + P+RL+R I E++ A G G++ G+++++
Sbjct: 99 VFGEAQAILAGDALLTYAFELLGN-LDHAQPERLLRVITEVAMAAGKDGMVGGQVLDLAG 157
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+D++L+E++ I + + G ++ S G ++GGGSE++I+ L +Y + +GLA+Q+ DDI
Sbjct: 158 EGRDLTLNEIEEIHKAKTGAILTVSARLGGILGGGSEDEIDALTEYAQSLGLAFQIKDDI 217
Query: 246 LDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYF 289
LD + K AG D ++TY L+G+ GA + + + +A L F
Sbjct: 218 LDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGASKQLHDQIIKAQAALEPF 269
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + S +L GG S +P A A EM+ T +L
Sbjct: 44 GKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDLRRGKKTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPD-RLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA E + N S ++A I+ G G++ G+++++
Sbjct: 104 VFGEAMAILAGDGLLNYAYEVILNHALNSSDQPSAIKACKAIADGAGIYGMVGGQVVDVE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ K++ L+ LDFI + +I A + G + G ++ +EKL YG+ +GLA+Q+ DD
Sbjct: 164 SESKEIDLACLDFIHLNKTAAMIVACMKSGAYLAGADDDTVEKLEAYGRYLGLAFQIADD 223
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +KE G +D+ATYP ++G+ +K A++LV +A +++ F+ A
Sbjct: 224 ILDIEGDEKELGKNVGSDIENDKATYPHILGMERSKEIARDLVVKAKEKIEAFEG--AEF 281
Query: 297 LYHLADFLVSRHK 309
L LAD+++SR+K
Sbjct: 282 LVGLADYVISRNK 294
>gi|420156901|ref|ZP_14663741.1| polyprenyl synthetase [Clostridium sp. MSTE9]
gi|394756911|gb|EJF39970.1| polyprenyl synthetase [Clostridium sp. MSTE9]
Length = 295
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 48/258 (18%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+R+ L + C L GG+ ++ +P ACA EM+ T +L
Sbjct: 35 MEYSLLSG--GKRIRPILTLEFCRLCGGSLTAALPFACAIEMIHTYSLIHDDLPCMDDDE 92
Query: 136 --------------------NRALLCYAVEHMAT--KTKNVSPDRLVRAIGEISSAVGTR 173
ALL A E M + + + A G ++ A G
Sbjct: 93 LRRGRPTNHRVYGEATALLAGDALLTLAFETMLSPQTIRTAGAVKTATAAGVLARAAGAT 152
Query: 174 GVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGK 233
G++ G+I+++ S+GK + LS L + + G LI A+ G ++GG E I R+Y K
Sbjct: 153 GMVGGQIIDLASEGKKIPLSTLRVMDERKTGALILAAAEMGCVVGGAGNEKIRAAREYAK 212
Query: 234 CVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQE 285
+GLA+Q+ DDILD G +D++TY LMG+ GAK+ +EL EA
Sbjct: 213 ALGLAFQIVDDILDVTGDSTLLGKNVGVDDLNDKSTYVSLMGLDGAKKAVRELTDEAVTA 272
Query: 286 LAYFDPTRAAPLYHLADF 303
LA FD A +LAD
Sbjct: 273 LAKFDGDTA----YLADL 286
>gi|397614405|gb|EJK62777.1| hypothetical protein THAOC_16595 [Thalassiosira oceanica]
Length = 207
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 131 VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-D 189
V + +LL + EH+A +TK V +++V I + +VG G+ G++M++ + +
Sbjct: 21 VAILAGDSLLSTSFEHVARETKGVPAEKIVDVIARLGRSVGAEGLAGGQVMDLECEARPG 80
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
+L +L +I + G L++ +V G ++GG + ++E K+ +GLA+QV DDILD
Sbjct: 81 TTLDDLKWIHIHKTGTLLQIAVAAGAILGGATPAEVEACEKFSFNIGLAFQVADDILDCT 140
Query: 250 KKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K AG DEA TY KL+G+ +K+YA++LV EA LA F RA PL +A
Sbjct: 141 ASSEDLGKTAGKDEAVDKTTYVKLLGLEQSKQYARDLVDEAKACLAPF-GERALPLLAIA 199
Query: 302 DFLVSR 307
D+++ R
Sbjct: 200 DYIIER 205
>gi|388496908|gb|AFK36520.1| unknown [Medicago truncatula]
Length = 342
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 135/287 (47%), Gaps = 51/287 (17%)
Query: 66 YMTLKAKKINKALFEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCELVGGNESS 119
Y T +IN+ L E V ++Y L +R +CI++CEL GG+ +
Sbjct: 53 YWTSLMTQINQKLDEAIEVQFPQQIYEAMRYSALAKG-AKRSPPVMCISACELFGGSRLA 111
Query: 120 VMPLACAAEML------------------------------VTLAL--NRALLCYAVEHM 147
P ACA EM+ V +A+ AL +H+
Sbjct: 112 AFPTACALEMVHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHI 171
Query: 148 ATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGK 205
+ T + V R++R I EI+ VG+ G+ AG+ +++ V L I+ + G+
Sbjct: 172 VSHTPSDLVPEPRVLRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGL-----IQDKKFGE 226
Query: 206 LIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDE---ATY 262
+ E S VCG L+ G +++IE+LR+YG+ VG+ Y + DDIL+ K + D E +Y
Sbjct: 227 MAECSAVCGGLLAGAEDDEIERLRRYGRAVGVLYAIVDDILEERLKPEGDKDRENSGKSY 286
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADFLVSR 307
++ GV A A+EL A+A +EL F+ + PLY ++ + R
Sbjct: 287 VEVYGVEKAAEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDR 333
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC++SCEL G+ +P+ACA E++ T +L
Sbjct: 42 GKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 136 ----------NRALLCYAVEHMATKTKNVSPD--RLVRAIGEISSAVGTRGVLAGRIMEI 183
LL A E + D R+++A EI+ A G +G++ G++++I
Sbjct: 102 VYGEAIAILAGDGLLNLAFEVLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDI 161
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+ ++ EL F+ + G LIEASV G I G EEDI LR+Y +GLA+Q+ D
Sbjct: 162 LSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKD 221
Query: 244 DILDNM----KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K K+ G D + T+ + G+ +++ EL +A + L F +A
Sbjct: 222 DILDVIGEEEKLGKKVGSDREKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRFGE-KAL 280
Query: 296 PLYHLADFLVSR 307
L L+++L+ R
Sbjct: 281 FLKELSNYLIER 292
>gi|333897019|ref|YP_004470893.1| polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112284|gb|AEF17221.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 50/268 (18%)
Query: 63 IDEYMTLKAKKINKALFEGAAV---PLIL----QYPTLPNHEGERVHGTLCIASCELVGG 115
D+ + K + INK L E ++ P +L +Y G+R+ LCI++CELVGG
Sbjct: 2 FDDILREKIEYINKGLNEFLSLTDRPEVLFEAMKYSVFAG--GKRLRPVLCISACELVGG 59
Query: 116 NESSVMPLACAAEMLVTLAL--------------------------------NRALLCYA 143
N+ +P+ACA E + T +L ALL Y
Sbjct: 60 NKEDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYG 119
Query: 144 VEHMATKTKNVSPDR-LVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLR 202
E + + N + + +++A EI+ A G RG++AG+++++ S+ K++ +L F+ +
Sbjct: 120 FEVLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHK 179
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD 258
G LI+AS++ G +IGG ++KL Y + +G A+QV DDIL D K K+ G D
Sbjct: 180 TGALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAKLGKDIGSD 239
Query: 259 ----EATYPKLMGVAGAKRYAKELVAEA 282
++T+ ++G+ + EL +A
Sbjct: 240 IANGKSTFVSVLGLQRSVELVNELTEKA 267
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ LC+++CEL+GG+ +P+AC+ E++ T +L N
Sbjct: 42 GKRLRPVLCLSACELLGGDLKKALPVACSIELIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 139 LLCYAVEHMATK-TKNVSPDRLVR--------------AIGEISSAVGTRGVLAGRIMEI 183
+ A+ +A N+ + L+R A EI++A G +G++ G++ +I
Sbjct: 102 VFGEAIAILAGDGLLNLGYEVLIRHALENPEDYEKILKAANEIATASGCKGIIGGQVEDI 161
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+ +++ EL +I + LIEASV G + G SE+++E LR+Y +GLA+Q+ D
Sbjct: 162 LSQNTELTYEELKYIHEHKTAALIEASVCAGAHMAGASEKEVELLREYAGLIGLAFQIKD 221
Query: 244 DILDNMKKKKEAG-----DDEA---TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + +K G D E T+ + GV ++ KEL EA + L F RA
Sbjct: 222 DILDVIGDEKTLGKKVGSDREKGKFTFVNIFGVEKSQEMVKELTDEAIKILDTF-GERAQ 280
Query: 296 PLYHLADFLVSR 307
L L+++L+ R
Sbjct: 281 FLKDLSNYLIER 292
>gi|435853309|ref|YP_007314628.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
gi|433669720|gb|AGB40535.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
Length = 293
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 56/297 (18%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL----------ILQYPTLPNHEGERVHGTLCIASC 110
+++++ +T KAK IN+ L E +P+ ++Y L G+R+ L +
Sbjct: 1 MKVNQVITKKAKLINQTLEE--LLPMEEAKPKKLSQAMRYSVLAG--GKRLRPILTLLVA 56
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
+L+G E V+P ACA EM+ +L +
Sbjct: 57 KLIGEEEKKVLPAACALEMIHNYSLIHDDLPCMDDDDYRRGQPTNHKVYGEAMAVLAGDS 116
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
LL A E + ++ N+ D+++ A E++ A G +G++ G+ +I ++G+ + L++I
Sbjct: 117 LLTLAFETI-SRINNIDQDKVLLATQELAIAAGNQGMVGGQAADIVAEGQKIDKEGLEYI 175
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKE 254
+ G L+ A+V G ++ G ++E++ L Y + +GLA+QV DDIL D K K+
Sbjct: 176 HTHKTGALLRAAVRIGAILAGANKEELAALTTYAQKIGLAFQVVDDILDIEGDEEKLGKD 235
Query: 255 AGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D+AT+P L G+ AK+ A++L EA + + F A L LAD+++ R
Sbjct: 236 VGSDLERDKATFPALYGLEEAKKMAQKLCQEAKEAIHIFGE-EAKVLLELADYIIGR 291
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 45/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ + + +ES V+ +ACA EM+ T +L
Sbjct: 46 GKRLRPLLCLLTAGALRQDESRVLDIACAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHR 105
Query: 136 --NRALLCYAVEHMATKTKNV------SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
A+ A + + + V +PD ++R I EI+S+ GT G++ G++++I S+G
Sbjct: 106 VYGEAMAILAGDALLNRAFEVLCQLPLAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEG 165
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL- 246
K + + + +I + G++I + +V + + E IE +YG +GLA+Q+ DDIL
Sbjct: 166 KSIDMPTMRYIHENKTGRIIRSCLVSSAIACQATAEQIELFDRYGYNIGLAFQIADDILD 225
Query: 247 ---DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP--- 296
D K G D ++T+P L+G+ GA++ +E++ EAN+ L DP +P
Sbjct: 226 IEGDEATMGKPVGSDLQNRKSTWPALVGMNGARKAMQEMIDEANRAL---DPLGDSPAVT 282
Query: 297 -LYHLADFLVSR 307
L LA F++ R
Sbjct: 283 ALRDLARFIIER 294
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC++SCEL G+ +P+ACA E++ T +L
Sbjct: 42 GKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 136 ----------NRALLCYAVEHMATKTKNVSPD--RLVRAIGEISSAVGTRGVLAGRIMEI 183
LL A E + D R+++A EI+ A G +G++ G++++I
Sbjct: 102 VYGEAIAILAGDGLLNLAFEVLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDI 161
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+ ++ EL F+ + G LIEASV G I G EEDI LR+Y +GLA+Q+ D
Sbjct: 162 LSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKD 221
Query: 244 DILDNM----KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K K+ G D + T+ + G+ +++ EL +A + L F +A
Sbjct: 222 DILDVIGEEEKLGKKVGSDREKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRFGE-KAL 280
Query: 296 PLYHLADFLVSR 307
L L+++L+ R
Sbjct: 281 FLKELSNYLIER 292
>gi|258515780|ref|YP_003192002.1| polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 47/254 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ + IA+ E VGG+ VMP ACA E++ T +L
Sbjct: 44 GKRLRPAMLIAAAEAVGGSADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHK 103
Query: 136 ----------NRALLCYAVEHMA--TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL + + +A + ++P +VR I +IS+A GT G++ G++++I
Sbjct: 104 VFGEAMAILAGDALLTMSFQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDI 163
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S +++ L++I + G L A++ G ++ G +E+++ L Y + GLA+Q+ D
Sbjct: 164 VSANQEIDAGTLEYIHTKKTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITD 223
Query: 244 DILD---NMKKK-KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TR 293
DILD +M+K K G DE ATYP L G+ A R A A Q L +P +
Sbjct: 224 DILDVAGDMQKTGKPVGSDEKNNKATYPALYGLEEAYRLAGY---SAEQALYALEPFGEK 280
Query: 294 AAPLYHLADFLVSR 307
A L L F+V+R
Sbjct: 281 ANFLKELVKFVVNR 294
>gi|374579594|ref|ZP_09652688.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415676|gb|EHQ88111.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 288
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 123/250 (49%), Gaps = 42/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +AS E VGGN +++ A A E++ T +L
Sbjct: 39 GKRIRPVLALASAEAVGGNPETILRAAVALELIHTYSLIHDDLPAMDNDDYRRGRLSNHK 98
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E +A P+R +R I E++ A G G++ G++ ++
Sbjct: 99 VFGEAQAILAGDALLTYAFELLADSDLG-QPERQLRVIREVAVAAGKEGMVGGQVADLAG 157
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK ++L+E++ I + + G L+ S G ++ GG+E+ ++ L Y K +GLA+Q+ DDI
Sbjct: 158 EGKSLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEDQVKALTDYAKALGLAFQIKDDI 217
Query: 246 LDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K AG D ++TY L+G+ GA + + +A L FD RA L
Sbjct: 218 LDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGAAQQLHAQILKAQSSLEVFDE-RAVFL 276
Query: 298 YHLADFLVSR 307
LA ++ R
Sbjct: 277 NQLALYIEER 286
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 47/291 (16%)
Query: 63 IDEYMTLKAKKINKALF---EGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNE 117
++E++T + + I LF + +P L+ L + + G+R+ L +A G NE
Sbjct: 5 LNEFLTTRKQTIEDYLFTYVQELTIPEDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNE 64
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
+P+ CA EM+ T +L ALL +
Sbjct: 65 EDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFR 124
Query: 146 HMATK-TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCG 204
+ ++ + +VS D+ +R + E+ + G G++ G+ ++ ++ K VSL+EL+ I + G
Sbjct: 125 LITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELESIHARKTG 184
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA 260
KL+ SV G ++ G S++DIEKLR++ +G+A+Q+ DDILD K K G D A
Sbjct: 185 KLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTA 244
Query: 261 ----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYP L+ ++GAK E + A + ++ + L+ L D + SR
Sbjct: 245 NEKSTYPSLLTLSGAKEKLHEHITRAKEIVSNLQLEQQL-LHDLCDLIASR 294
>gi|220904228|ref|YP_002479540.1| polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 298
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 58 FPEIQIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCEL 112
P ++ E + + + + + L +G AVP L+ L + + G+R+ LC+++ L
Sbjct: 3 MPVSRMKELLRERGQMVEEELAVCLDGRAVPQRLKDSMLYSLQAGGKRLRPVLCLSAAAL 62
Query: 113 VGGNESSVMPLACAAEMLVTLAL------------------------NRALLCYAVEHMA 148
G +P A A EM+ T +L + A A + +
Sbjct: 63 CGLPLRDALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGLL 122
Query: 149 TKT------KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD-VSLSELDFIKRL 201
T ++P R++RAI E++ A G+ G++ G+ ++ GKD VS+ +L I +
Sbjct: 123 TDAFLMMCRSPLAPPRVLRAISELALAAGSSGMVGGQEWDMIFTGKDLVSIEDLRGIHAM 182
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGD 257
+ G L+ AS VCG ++ G S+ED+ + YG +G+A+Q+ DDILD + K G
Sbjct: 183 KTGALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTATLGKPVGS 242
Query: 258 DEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D A TYP L+G+ ++ A+E +A LA F A L LAD+ V+R
Sbjct: 243 DAAQGKKTYPALLGLDQSRALAREQAEKAKAALAGFSGDEADFLRALADYTVTR 296
>gi|12862621|dbj|BAB32549.1| putative GGPP synthase 1 [Euphorbia tirucalli]
gi|14041811|dbj|BAB55456.1| putative GGPPsynthase [Euphorbia tirucalli]
Length = 127
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL +A EH+A T NVSP R+VRAIGE++ A+G G++AG++++I+S+G +V L L+
Sbjct: 26 ALLAFAFEHIAVSTLNVSPARIVRAIGELAKAIGAEGLVAGQVVDISSEGLSEVDLERLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + KL+E +VV G ++GGG++E +EKLRKY + +GL
Sbjct: 86 FIHIHKTAKLLEGAVVLGAILGGGTDEQVEKLRKYARGIGL 126
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 55/258 (21%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC++SCEL+GG+ +P+ACA E++ T +L
Sbjct: 42 GKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHK 101
Query: 136 ------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLA 177
L+ +A+EH +R+++A EI++A G +G++
Sbjct: 102 VYGEAIAILAGDGLLNLGYEVLVRHALEHPE------DYERILKATNEIATASGCKGIIG 155
Query: 178 GRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
G++++I S+ ++ EL FI + LIEASV G I G +EED+ LR+Y + +G
Sbjct: 156 GQVVDILSQNTKLTYEELKFIHEHKTAALIEASVCAGAYIAGATEEDVHALREYARLIGF 215
Query: 238 AYQVWDDILDNM----KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYF 289
A+Q+ DDILD + K K+ G D + T+ + + ++ EL A + L F
Sbjct: 216 AFQIKDDILDVIGEEEKLGKKVGSDREKGKFTFVNIFELEKSQEMVVELTQNAVKILDRF 275
Query: 290 DPTRAAPLYHLADFLVSR 307
+A L L+++L+ R
Sbjct: 276 GE-KALFLKELSNYLIER 292
>gi|10801556|dbj|BAB16691.1| GGPP synthase 1 [Hevea brasiliensis]
Length = 127
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL +A EH+A T NVS R+VRA+GE++ A+G G++AG++++INS+G +V L +L+
Sbjct: 26 ALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + KL+E +VV G ++GGG++E++EKLRKY + +GL
Sbjct: 86 FIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGL 126
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 146/296 (49%), Gaps = 52/296 (17%)
Query: 61 IQIDEYMTLKAKKINKALFEG--------AAVPLILQYPTLPNHEGERVHGTLC-IASCE 111
++I++++ KA+ +NKAL + A + ++Y TL G+R+ L I +
Sbjct: 1 MEINDFLVAKAEAVNKALDDYLPAEDKKPAKLHQSMRYSTLMG--GKRLRPVLTLIVANS 58
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
L G E +MP A A E++ +L AL
Sbjct: 59 LFGVEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDAL 118
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L YA E + + + +++++ E++ G RG++ G+ ++ ++GK V +L+FI
Sbjct: 119 LTYAFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIH 178
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM----KKKKEA 255
R + G L++A+V G ++GG +E++ L Y + +GL++Q+ DDILD + K KE
Sbjct: 179 RYKTGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKEV 238
Query: 256 GDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G DE AT+P + G+ ++ A++ V A + + F+ A L LAD+++ R
Sbjct: 239 GSDEGQDKATFPSVYGLEESRAMAQKKVQAAKEAIERFEED-AELLIQLADYIIER 293
>gi|345888510|ref|ZP_08839592.1| hypothetical protein HMPREF0178_02366 [Bilophila sp. 4_1_30]
gi|345040637|gb|EGW44875.1| hypothetical protein HMPREF0178_02366 [Bilophila sp. 4_1_30]
Length = 302
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 41/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+++ L G + +VMP A + EM+ T +L
Sbjct: 50 GKRLRPVLCLSTAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A MA+ K++ R++ A+ +SSA G+ G++ G+I++++
Sbjct: 110 AFDEATAILAGDALLTDAFGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDMDC 169
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
GK DV L L + L+ G + + V G L+ G SE DI LR YG+ +G+ +Q+ DD
Sbjct: 170 TGKTDVPLETLQTLHALKTGAMFRVACVSGGLLAGASEPDIASLRAYGEALGVTFQIVDD 229
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K AG D + TYP LMG+ ++ A+E +A L+ F AA
Sbjct: 230 ILDETADTATLGKPAGSDAEMGKTTYPSLMGLDRSRELAQEFAEKAVDSLSAFSGQDAAF 289
Query: 297 LYHLADFLVSRHK 309
L LA LV+R+K
Sbjct: 290 LKGLALMLVTRNK 302
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 42/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E+ G +P ACA EM+ T +L
Sbjct: 42 GKRLRPLLTLAAAEIFGVPRLHALPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHK 101
Query: 136 ----------NRALLCYAVEHMATK-TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+LL A E +A + T +P +VR + A G G++ G+++++
Sbjct: 102 VFGDAMAILAGDSLLTLAFETLAAEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLL 161
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GK V+ + LD+I R + G L + G ++GG S E++++L + + +GLA+Q+ DD
Sbjct: 162 SEGKQVNAATLDYIHRHKTGALFTCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDD 221
Query: 245 ILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K+ G D+ ATYP L G+ A+ A++L++ A +E+ YF +
Sbjct: 222 ILDITGDEAALGKKTGADQNRQKATYPALYGLKQAEEKARDLLSAAEKEMEYFGDAGKSL 281
Query: 297 LYHLADFLVSRHK 309
L+ LA LV R K
Sbjct: 282 LF-LAKKLVEREK 293
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [[Clostridium] sticklandii]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [[Clostridium] sticklandii]
Length = 295
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 40/252 (15%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + + +L+ N + +ACA EM+ T +L
Sbjct: 44 GKRLRPILFLETIKLLNKNPFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHV 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL A E M + I IS A G G++AG+ ++I S
Sbjct: 104 VFGEATAILAGDGLLNLAHEIMIAFVSKKLTKNNINGINIISKAAGINGMIAGQAVDIES 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK + + + FI + G LIEAS+V ++ + I L+ Y K +GLA+Q+ DDI
Sbjct: 164 EGKSIDIDTMKFIHSNKTGALIEASIVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDI 223
Query: 246 LDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + E G +D+ATYPK G+ +K YAK + A + L F+P
Sbjct: 224 LDIEGNEAELGKKIGSDELNDKATYPKYFGLEKSKEYAKNTITNAIESLNVFEPREKTFF 283
Query: 298 YHLADFLVSRHK 309
LAD+++ R K
Sbjct: 284 VELADYIICRKK 295
>gi|386826800|ref|ZP_10113907.1| geranylgeranyl pyrophosphate synthase [Beggiatoa alba B18LD]
gi|386427684|gb|EIJ41512.1| geranylgeranyl pyrophosphate synthase [Beggiatoa alba B18LD]
Length = 296
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 100/166 (60%), Gaps = 10/166 (6%)
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEAS 210
T+ +SP + + + +S A +RG++ G+++++ + GK+++ +EL+ + + G LI AS
Sbjct: 130 TQQLSPAQRLAMVEALSLASSSRGMVGGQMIDMEAVGKNLNAAELENMHIHKTGALIRAS 189
Query: 211 VVCGVLIG-GGSEEDIEKLRKYGKCVGLAYQVWDDILD-----NMKKKKEAGD---DEAT 261
V G L SEE E+L +Y KC+GLA+Q+ DDILD KK+ D ++ T
Sbjct: 190 VKLGALASPNFSEETFEQLDRYAKCIGLAFQIQDDILDVEAPTETLGKKQGADTALNKPT 249
Query: 262 YPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
YP ++G+ +K+ A EL+ +A Q L FD RA PL LA +++ R
Sbjct: 250 YPSIIGLQASKQMAIELIEQAVQALQTFD-QRADPLRELAHYIIKR 294
>gi|358343453|ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
gi|355501751|gb|AES82954.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
Length = 277
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 44/243 (18%)
Query: 104 TLCIASCELVGGNESSVMPLACAAEML------------------------------VTL 133
+CI++CEL GG+ + P ACA EM+ V +
Sbjct: 31 VMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDM 90
Query: 134 AL--NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKD 189
A+ AL +H+ + T + V R++R I EI+ VG+ G+ AG+ +++
Sbjct: 91 AILAGDALFPLGFQHIVSHTPSDLVPEPRVLRVIAEIARCVGSTGMAAGQFLDLKGGPNA 150
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
V L I+ + G++ E S VCG L+ G +++IE+LR+YG+ VG+ Y + DDIL+
Sbjct: 151 VGL-----IQDKKFGEMAECSAVCGGLLAGAEDDEIERLRRYGRAVGVLYAIVDDILEER 205
Query: 250 KKKKEAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADFL 304
K + D E +Y ++ GV A A+EL A+A +EL F+ + PLY ++
Sbjct: 206 LKPEGDKDRENSGKSYVEVYGVEKAAEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYA 265
Query: 305 VSR 307
+ R
Sbjct: 266 IDR 268
>gi|398803633|ref|ZP_10562651.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
gi|398095886|gb|EJL86217.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
Length = 306
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 132/309 (42%), Gaps = 58/309 (18%)
Query: 53 NNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL----------ILQYPTLPNHEGERVH 102
N P + ++ + + AL A P ++Y L G+R+
Sbjct: 2 NAPEKLPLFTLSDWSAKQLATVESALSRWVACPTDSPAPAGLGDAMRYAVLDG--GKRLR 59
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------------- 135
L +A+CE VGGN + + ACA E++ +L
Sbjct: 60 PLLVMAACEAVGGNREAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQA 119
Query: 136 -----NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV 190
AL A E + + +V R ++ A G +G+ G+ +++ S G +
Sbjct: 120 QALLAGDALQALAFEFLTPEDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGMPL 179
Query: 191 SLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--- 247
+L + RL+ G L+EASV+ G G + + LR YG VGLA+QV DDILD
Sbjct: 180 DSQQLHEMHRLKTGALLEASVMMGAACGTVAPAAWQALRDYGSAVGLAFQVVDDILDVTA 239
Query: 248 -----NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPT---RAAPLYH 299
K+A D+ T+ LMG+ +K YA++L+A A LA D T R L
Sbjct: 240 DSATLGKTAGKDAAQDKPTFVSLMGLEASKAYAQQLLARA---LAGLDATGLARTEALRA 296
Query: 300 LADFLVSRH 308
LAD LV+RH
Sbjct: 297 LADMLVNRH 305
>gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
Length = 302
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 41/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+++ L G + +VMP A + EM+ T +L
Sbjct: 50 GKRLRPVLCLSTAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A MA+ K++ R++ A+ +SSA G+ G++ G+I++++
Sbjct: 110 AFDEATAILAGDALLTDAFGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDMDC 169
Query: 186 KGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
GK +V L L + L+ G + + V G L+ G SE DI LR YG+ +G+ +Q+ DD
Sbjct: 170 TGKTNVPLETLQTLHALKTGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQIVDD 229
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K AG D + TYP LMG+ ++ A+E +A L+ F AA
Sbjct: 230 ILDETADTATLGKPAGSDAEMGKTTYPSLMGLDRSRELAQEFAEKAVDSLSAFSGQDAAF 289
Query: 297 LYHLADFLVSRHK 309
L LA LV+R+K
Sbjct: 290 LKGLALMLVTRNK 302
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 50/296 (16%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNH-------EGERVHGTLCIASCELV 113
++I Y+ ++ K+++KAL L +Y L G+R+ L +A+ E V
Sbjct: 1 MEITAYLDMQKKRVDKALEALFERELSREYGRLAEGIRYSLLAGGKRIRPVLALAAIEAV 60
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GG+ S++PL E++ T +L ALL
Sbjct: 61 GGDGESLLPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLT 120
Query: 142 YAVEHMA--TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
+A ++ K + R + + E+SSA G G++ G+ ++I S+GK+++L EL+ +
Sbjct: 121 HAFTLLSDPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLH 180
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM--------KK 251
R + G L+ ASV G ++ G S E +E L +YG+ VG+A+Q+ DD+LD +
Sbjct: 181 RHKTGALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAA 240
Query: 252 KKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+K+AG + TYP L+G+ A+ A+E EA++ +A F ++ PL +A +++ R
Sbjct: 241 QKDAGKSKNTYPGLVGIDRARILAEEKCREAHEAVAVF-GSKGEPLARIASYIIER 295
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 48/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L IA+CE GG+ + +P+ACA EM+ T +L
Sbjct: 48 GKRMRPLLVIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHK 107
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A + A++ V +R++ + +++ G RG++ G++ ++
Sbjct: 108 VFGEASAILAGDALLTHAFYSIIQASRQFGVPAERVLSIVEDLAEYAGPRGMVGGQVADM 167
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ +L +L++I + LI S++ G I G +E IE LR +G +GLA+Q+ D
Sbjct: 168 EGEQGLTTLEQLEYIHLHKTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQD 227
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQ---ELAYFDPT 292
DILD + + + G ++ TYP +G+ ++R + L AEA + E + DP+
Sbjct: 228 DILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDPSRREVERLTAEAKRVITEGNFNDPS 287
Query: 293 RAAPLYHLADFLVSR 307
R L +ADFL++R
Sbjct: 288 R---LLEIADFLMAR 299
>gi|408356541|ref|YP_006845072.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
gi|407727312|dbj|BAM47310.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
Length = 294
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 46/251 (18%)
Query: 66 YMTLKAKKINKALFEGA---AVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNESSV 120
Y+ + IN +L E ++P L+ L + + G+R+ L IAS E GG + V
Sbjct: 8 YLEANLEFINHSLIESIEKLSIPSTLKASMLYSIKAGGKRIRPILMIASVEAFGGKKEDV 67
Query: 121 MPLACAAEMLVTLAL--------------------------------NRALLCYAVEHMA 148
+P A A E++ T +L +LL A + +
Sbjct: 68 LPAAIALELVHTYSLIHDDLPAMDDDNLRRGQPTNHIEFGEATAILAGDSLLTLAFQ-VI 126
Query: 149 TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIE 208
++ +N++ ++ V I +S A G G++AG+I+++ ++ + V+LSEL+ I RL+ G+L+
Sbjct: 127 SEAENLTAEQKVTIIKRLSMASGPTGMVAGQILDLEAEERQVNLSELEQIHRLKTGELLI 186
Query: 209 ASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDDE----A 260
+V G + G ++E ++ +R++G +GL +Q+ DDIL D K K G D+ +
Sbjct: 187 FAVEIGAYLAGAAQEQLKAIREFGHHIGLIFQIQDDILDIEGDEQKLGKAVGSDQENKKS 246
Query: 261 TYPKLMGVAGA 271
TYPKL+G+ GA
Sbjct: 247 TYPKLLGIEGA 257
>gi|89574388|gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber officinale]
Length = 112
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 8/112 (7%)
Query: 206 LIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------D 257
+ SVV G ++GG S++ IE+LRKY + +GL +QV DDILD K +E G
Sbjct: 1 VFRGSVVLGAIVGGASDDQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 60
Query: 258 DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
D+ TYPKL+G+ +K +A +L+ A ++LA FDP +AAPL HLA+++ R K
Sbjct: 61 DKTTYPKLLGLDESKEFAVKLLKAATEQLAGFDPIKAAPLLHLANYIAYRQK 112
>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
Length = 297
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 45/268 (16%)
Query: 82 AAVPLI--LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML--------- 130
AA PL ++Y L G+RV L A+ ++ G ++ ACA E +
Sbjct: 31 AATPLFDAMRYAALDG--GKRVRPLLVFAAGDVSGATPEALSAAACAVECIHAYSLVHDD 88
Query: 131 -----------------------VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEIS 167
+ L AL +A E +A V P R + + ++
Sbjct: 89 LPCMDDDVLRRGKPTCHIAHGEAMALLAGDALQAHAFELLAIPLPGVVPARQLAMVSALA 148
Query: 168 SAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEK 227
A G RG+ G+ +++ + G + + L+++ L+ G LI+A+V G L G ++++
Sbjct: 149 HAAGPRGMCGGQAIDLAAVGHALDQTALEYMHCLKTGALIQAAVRLGALAGSPDDDELAA 208
Query: 228 LRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELV 279
L +Y + +GLA+QV DD+LD K+A D+ TY LMG+ A+ YA L+
Sbjct: 209 LDRYARRIGLAFQVIDDVLDCEADSATLGKTAGKDAAHDKPTYVSLMGLGEARSYAHALL 268
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
A+A++ LA F RA L LAD++V+R
Sbjct: 269 ADAHEALALFG-ARARRLQQLADYIVAR 295
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 123/256 (48%), Gaps = 45/256 (17%)
Query: 98 GERVHGTLCIASCELVGGNESS---VMPLACAAEMLVTLAL------------------- 135
G+R+ LC+A E V E++ + +ACA E + T +L
Sbjct: 44 GKRIRPILCLAGAEAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPT 103
Query: 136 -------------NRALLCYAVEHMATK-TKNVSPDRLVRAIGEISSAVGTRGVLAGRIM 181
LL +A + ++++ + +++ +R I I+ A G G++ G+ +
Sbjct: 104 NHTVFGEAAAILAGDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSL 163
Query: 182 EINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
++ +G+ V L I R + G LI ASV+ G ++ G S E L+ YG +GLA+Q+
Sbjct: 164 DMIYEGQQVGYEMLRTIHRSKTGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQI 223
Query: 242 WDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR 293
DD+LD ++ G D+ TYP L G ++ A+E V EA LA FD +
Sbjct: 224 VDDLLDVEATTEQLGKPAGSDLKSDKVTYPSLFGKETSRTMAREAVQEAIAALAAFDH-Q 282
Query: 294 AAPLYHLADFLVSRHK 309
A PL +LA+F+V R K
Sbjct: 283 ADPLRNLANFIVDRKK 298
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 41/230 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ G +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + +A +SP +R I E++ A G G++AG++ +I
Sbjct: 106 VFGEAMAILAGDGLLTYAFQVIAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIE 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GK +SL +L++I R + GK+++ SV+ G L+ + E + +L + +GLA+Q+ DD
Sbjct: 166 SEGKQLSLEQLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDD 225
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQEL 286
ILD K K G D + TYP L+ +AGAK +AEA + L
Sbjct: 226 ILDIEGLEEKMGKRVGSDMENKKVTYPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| polyprenyl synthetase [Clostridium bartlettii DSM 16795]
Length = 295
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 55/303 (18%)
Query: 46 ENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTL 105
E+L KS + E + +YM K + K +FE L + G+R+ L
Sbjct: 5 EDLKTKS----AYIEDLLKQYMP-KEEGYQKTIFEAMNYSL--------SSGGKRLRPIL 51
Query: 106 CIASCELVGGNESSVMPLACAAEMLVTLAL------------------------------ 135
+ S +++GG+ V+P A EM+ T +L
Sbjct: 52 TLESAKIIGGDVKEVIPFCVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMAT 111
Query: 136 --NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
ALL YA E M ++ + D ++AI EI+ G G++ G++++I S+ K +
Sbjct: 112 LAGDALLNYAFEIMLKESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEK 171
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK 252
+LDFI + +I + G ++G E+D++ + KY K +GLA+Q+ DDILD + +
Sbjct: 172 EKLDFIHMNKTAAMIIGCMRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILDIVGDE 231
Query: 253 KEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFL 304
K G + ++TYP L+G+ +K+ A +L+ EA + + L LAD++
Sbjct: 232 KALGKPVGSDIENHKSTYPSLIGLDESKKVATDLIKEAKDSIRKI-SGESRFLEDLADYI 290
Query: 305 VSR 307
+SR
Sbjct: 291 ISR 293
>gi|375135831|ref|YP_004996481.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 303
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 94/148 (63%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + +++G+++++ ++GK ++ EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ AK YAKEL
Sbjct: 215 LRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAKSYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGDD-AKELVDISQFLLAR 301
>gi|336234744|ref|YP_004587360.1| polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361599|gb|AEH47279.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 41/230 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ G +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + +A +SP +R I E++ A G G++AG++ +I
Sbjct: 106 VFGEAMAILAGDGLLTYAFQVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIE 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GK +SL +L++I R + GK+++ SV+ G L+ + E + +L + +GLA+Q+ DD
Sbjct: 166 SEGKQLSLEQLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDD 225
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQEL 286
ILD K K G D + TYP L+ +AGAK +AEA + L
Sbjct: 226 ILDIEGLEEKMGKRVGSDIENKKVTYPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|372271355|ref|ZP_09507403.1| farnesyl-diphosphate synthase [Marinobacterium stanieri S30]
Length = 297
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL C A EH++ + SP +R + ++ A G RG++AG+ +++ K ++L +L
Sbjct: 118 ALQCLAFEHLSAPIEGESPALQLRMLATLARASGERGMVAGQAFDLSHVDKPLTLEQLKA 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDIL----DNMKKK 252
+ + G LI A++ G L G + ED +E LR+YG +GLA+Q+ DD+L D
Sbjct: 178 MHACKTGALITAAIELGALAAGPAGEDKLEALRRYGDLIGLAFQIQDDLLDIEGDTETLG 237
Query: 253 KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G D A TYP L+G+ GA++ ++L EA LA F P A L L D++VSR
Sbjct: 238 KPQGSDLAQNKPTYPALLGLEGARQQLQQLHQEAVDILAAFGPA-ADDLIGLTDYIVSR 295
>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 157
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG---KDVSLSE 194
ALL A EH+ +VS ++VRA+ E++ ++GT+G++AG+ +++S+G DV L +
Sbjct: 45 ALLALAFEHLTEA--DVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLED 102
Query: 195 LDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
L++I + G L+EAS V G +IGGG+E++IEK+R + +C+GL +QV DDILD
Sbjct: 103 LEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILD 155
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 48/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L IA+CE GG+ + +P+ACA EM+ T +L
Sbjct: 54 GKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHK 113
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A + A + V +R++ + +++ G RG++ G++ ++
Sbjct: 114 VFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVEDLAVYAGPRGMVGGQVADM 173
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ +L +L++I + LI S++ G + G S+ IE LR +G +GLA+Q+ D
Sbjct: 174 EGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDSQIESLRTFGHHIGLAFQIQD 233
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA---YFDPT 292
DILD + + + G ++ TYP +G+ ++ + L AEA + ++ + DPT
Sbjct: 234 DILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERLTAEAKRVISEGNFADPT 293
Query: 293 RAAPLYHLADFLVSR 307
R L +ADFL++R
Sbjct: 294 R---LLEIADFLMAR 305
>gi|345877461|ref|ZP_08829207.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225510|gb|EGV51867.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 300
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 10/164 (6%)
Query: 153 NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV 212
+ S + + I +S A G+RG+ G+ +++N+ G+++SL+EL+ + + G LI ASV
Sbjct: 136 HASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGALIRASVN 195
Query: 213 CGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYP 263
L+ E E +L Y KCVGLA+Q+ DDILD + K+ D+ TYP
Sbjct: 196 TASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKDQAQDKPTYP 255
Query: 264 KLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L+G+ GA+ A EL A+A++ L FD ++A PL LAD+++ R
Sbjct: 256 ALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGR 298
>gi|442608538|ref|ZP_21023285.1| Octaprenyl-diphosphate synthase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441749934|emb|CCQ09347.1| Octaprenyl-diphosphate synthase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 295
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 124/251 (49%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ EL G NE+ + LA A E + T +L
Sbjct: 44 GKRLRPFLVYATGELYGANENDLDVLAVAIECIHTYSLIHDDLPAMDDDDLRRGRATCHI 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL A E ++ +V ++++ + ++ A G G+ G+ M+I +
Sbjct: 104 EFDEATAILAGDALQTLAFELISNHQFSVPNSQVIKMLQTLTKATGFLGMAGGQAMDIAA 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDD 244
GK +SL +L+ I L+ G L+ A++ G L S ED++ LRKYGK +GLA+QV DD
Sbjct: 164 TGKSISLEQLETIHSLKTGALLVAAIELGALCSNDVSNEDLQLLRKYGKKIGLAFQVQDD 223
Query: 245 ILD-----NMKKKKEAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++ K + D E +TYP +G+AGAK +A++LV ++ L ++
Sbjct: 224 ILDIVGDTSVLGKPQGSDLELAKSTYPAHLGIAGAKAFAEQLVKQSIDALNSMSK-QSES 282
Query: 297 LYHLADFLVSR 307
L LA F+V R
Sbjct: 283 LTQLAHFIVER 293
>gi|345863395|ref|ZP_08815606.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125473|gb|EGW55342.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 290
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 10/164 (6%)
Query: 153 NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV 212
+ S + + I +S A G+RG+ G+ +++N+ G+++SL+EL+ + + G LI ASV
Sbjct: 126 HASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGALIRASVN 185
Query: 213 CGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYP 263
L+ E E +L Y KCVGLA+Q+ DDILD + K+ D+ TYP
Sbjct: 186 TASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKDQAQDKPTYP 245
Query: 264 KLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L+G+ GA+ A EL A+A++ L FD ++A PL LAD+++ R
Sbjct: 246 ALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGR 288
>gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 288
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 16/178 (8%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA E ++ K ++PD+L++ I IS++VG G++ G+ +I KD+ DF
Sbjct: 117 GLLTYAFELISGNQK-ITPDKLLKVINVISNSVGVYGMVGGQAGDILENFKDI-----DF 170
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + K I G ++ G S+++IE L+ YG +G+A+Q+WDDILD + +++ G
Sbjct: 171 IHTHKTAKFISGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEKVGK 230
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ TYP + G+ + + AK+ V +A QE+ Y L +AD++VSR
Sbjct: 231 KLHKDKEKNKITYPSVYGLDNSIKMAKDYVEKAKQEVKYL--KNPDILISIADYIVSR 286
>gi|423719308|ref|ZP_17693490.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368211|gb|EID45486.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 297
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 41/230 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ G +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + +A +SP +R I E++ A G G++AG++ +I
Sbjct: 106 VFGEAMAILAGDGLLTYAFQVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIE 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GK +SL +L++I R + GK+++ SV+ G L+ + E + L + +GLA+Q+ DD
Sbjct: 166 SEGKQLSLEQLEYIHRHKTGKMLQYSVLAGALLADANNEQLRHLDLFASHLGLAFQIRDD 225
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQEL 286
ILD K K G D + TYP L+ +AGAK +AEA + L
Sbjct: 226 ILDIEGLEEKMGKRVGSDIENKKVTYPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
Length = 303
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + +++G+++++ ++GK ++ EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD + K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQTIGLAFQVLDDILDIISSTEALGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGDN-AKELVDISQFLLAR 301
>gi|374324623|ref|YP_005077752.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
gi|357203632|gb|AET61529.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
Length = 307
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 48/293 (16%)
Query: 63 IDEYMTLKAKKINKALFEG----AAVPLILQYPT--LPNHEGERVHGTLCIASCELVGGN 116
+ EY+T ++ AL E ++P +L+ N G+R+ L IA+ E GG+
Sbjct: 13 LKEYLTGTVDAVSSALTEQFPAHWSIPAVLREAMNYSLNAGGKRLRPLLVIAATEAFGGS 72
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
+ +P+ACA EM+ T +L ALL +A
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAF 132
Query: 145 EHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLR 202
+ + + +S D L+ + E+S G RG++ G++ +++ + + EL++I +
Sbjct: 133 YSVVQSGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGMTGIEELEYIHLHK 192
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD------NMKKKKEAG 256
LI S++ G IGG + +E LR++G+ +GLA+Q+ DDILD M KK ++
Sbjct: 193 TADLIIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 257 --DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ TYP +G+ +++ ++L A A + L ++ L +AD+L+ R
Sbjct: 253 VEQEKVTYPFFIGMEASQQQVEKLTASAKKALIEGGIPDSSRLLEIADYLMKR 305
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|404489843|ref|YP_006713949.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|423682933|ref|ZP_17657772.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52348839|gb|AAU41473.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|383439707|gb|EID47482.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
Length = 296
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 44/266 (16%)
Query: 85 PLILQYPTLPNHE--GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------- 135
P IL+ L + E G+R+ L +A G +E + +P+ CA EM+ T +L
Sbjct: 30 PSILKESMLYSLEAGGKRLRPILVLALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 136 -------------------------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSA 169
ALL + + + + +VS ++ +R + E+ SA
Sbjct: 90 MDDDDLRRGKPTNHKIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNELISA 149
Query: 170 VGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLR 229
G G++ G+I+++ ++ K VSL EL I + KL+ SV+ G ++ SE++IEKLR
Sbjct: 150 AGAEGMVGGQILDMEAESKSVSLDELQRIHEGKTAKLLSFSVIAGAILADASEKEIEKLR 209
Query: 230 KYGKCVGLAYQVWDDILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAE 281
++ +G+ +Q+ DDILD K K G D ++TYP L+ + GA + E + +
Sbjct: 210 EFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDASNGKSTYPSLLSLEGASQKLDEHIEK 269
Query: 282 ANQELAYFDPTRAAPLYHLADFLVSR 307
A Q ++ P +Y D + +R
Sbjct: 270 AKQLISEL-PLEKELMYEFCDMIAAR 294
>gi|417550902|ref|ZP_12201981.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
gi|417565272|ref|ZP_12216146.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|395557028|gb|EJG23029.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|400386727|gb|EJP49801.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
Length = 303
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 94/148 (63%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + +++G+++++ ++GK ++ EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQVYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGE-NAKELVEISQFLLAR 301
>gi|13383239|dbj|BAB39470.1| putative GGPP synthase 3 [Lactuca indica var. laciniata]
Length = 127
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
+LL +A +H+A+ T SP+R++ A+GE++ ++GT G++AG++++I S G KDV L +L+
Sbjct: 26 SLLAFAFQHIASATVGASPERVLAAVGELAKSIGTEGLVAGQVVDIASTGAKDVGLDQLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+EA+VV G ++GGGS+ +EKLRK+ +C+GL
Sbjct: 86 FIHIHKTAALLEAAVVLGAILGGGSDTQVEKLRKFARCIGL 126
>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423702|ref|ZP_18913843.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699362|gb|EKU68977.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
Length = 303
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 94/148 (63%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + +++G+++++ ++GK ++ EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVSGQVLDLQAEGKKITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ AK YAKEL
Sbjct: 215 LRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAKVYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGDD-AKELVDISQFLLAR 301
>gi|372267523|ref|ZP_09503571.1| geranyltranstransferase [Alteromonas sp. S89]
Length = 300
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 101/182 (55%), Gaps = 14/182 (7%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL C A E +A ++ D VR I E++ A G RG++AG+ +++ + + ++L +L
Sbjct: 119 ALQCQAFELLAGAP--LAADLKVRLIAELARASGARGMVAGQAIDLAAVDQSLTLEQLKH 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NM 249
+ RL+ G LI AS G LIGG +E + + +Y + +GLA+QV DDILD
Sbjct: 177 MHRLKTGALISASARIGALIGGANEVQLAAITRYAEAIGLAFQVQDDILDVTANTETLGK 236
Query: 250 KKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYF----DPTRAAPLYHLADFLV 305
+ +A ++ TY L+G+ GA+ AKEL EA+Q L D L LAD++V
Sbjct: 237 TQGADAARNKPTYVSLLGLDGAQAKAKELHREAHQALQEISTPADKRNFRVLQQLADYIV 296
Query: 306 SR 307
+R
Sbjct: 297 NR 298
>gi|299768927|ref|YP_003730953.1| geranyltranstransferase [Acinetobacter oleivorans DR1]
gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter oleivorans DR1]
Length = 303
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A T ++ G+++++ ++ K ++ EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATATSKMVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQTIGLAFQVLDDILDITSSTEALGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LAYF A L ++ FL++R
Sbjct: 275 DQAFEALAYFGD-NAKELVEISQFLLAR 301
>gi|375309124|ref|ZP_09774405.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
gi|375078433|gb|EHS56660.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
Length = 307
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L IA+ E GG+ + +P+ACA EM+ T +L
Sbjct: 54 GKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHK 113
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A + A + VS D L+ + E+S G RG++ G++ ++
Sbjct: 114 VYGEAVAILAGDALLTHAFYSVVQAGRRHGVSSDALLSIVEELSEMSGARGMVGGQVADM 173
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ + + EL++I + LI S++ G IGG + +E LR++G+ +GLA+Q+ D
Sbjct: 174 SGEQGLTGIEELEYIHLHKTADLIIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQD 233
Query: 244 DILD------NMKKKKEAG--DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD M KK ++ ++ TYP +G+ +++ ++L A A + L ++
Sbjct: 234 DILDLIGDESKMGKKTQSDVEQEKVTYPFFIGMEASQQQVEKLTASAKKALIEGGIPDSS 293
Query: 296 PLYHLADFLVSR 307
L +AD+L+ R
Sbjct: 294 RLLEIADYLMKR 305
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 41/216 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +++ + +G N S +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLLSTIQALGQNPSLGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + +A + V D ++ I E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAILAGDGLLTYAFQLIAEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK ++L+EL++I R + GK+++ SV G L+GG + +L ++ +GLA+Q+ DD
Sbjct: 166 GEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDD 225
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAK 272
ILD K K G D +ATYP L+ +AGAK
Sbjct: 226 ILDIEGTEEKIGKRVGSDRENHKATYPALLSLAGAK 261
>gi|12082285|dbj|BAB20883.1| GGPP synthase [Taraxacum japonicum]
Length = 127
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
+LL +A +H+A+ T SP R++ A+GE++ ++GT G++AG++++I S G KDV L +L+
Sbjct: 26 SLLAFAFQHIASATVGASPARVLAAVGELAKSIGTEGLVAGQVVDIASTGAKDVGLEQLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+EA+VV G ++GGGS+ +EKLRK+ +C+GL
Sbjct: 86 FIHIHKTAALLEAAVVLGAIVGGGSDTQVEKLRKFARCIGL 126
>gi|337288952|ref|YP_004628424.1| Farnesyltranstransferase [Thermodesulfobacterium sp. OPB45]
gi|334902690|gb|AEH23496.1| Farnesyltranstransferase [Thermodesulfobacterium geofontis OPF15]
Length = 301
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLALNRALL--------------CYA 143
G+R+ LC+ASCE+VGG+ ++ A E + T +L L C+
Sbjct: 49 GKRIRPILCLASCEVVGGDWRKILLFAAGIECIHTYSLIHDDLPCMDDDDFRRGKPSCHK 108
Query: 144 VEHMATK--------------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
AT +NV +L++AI IS A+G G++ G+++++
Sbjct: 109 AFDEATAILAGDGLQALAFQFFTHPDLVRNVKKTKLLKAIYIISKAIGFEGMVGGQMVDL 168
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+GK + L +I + +LIEASV+ G ++GG ++++ L YGK +G A+Q+ D
Sbjct: 169 LMEGKKGNPRILKWIHLNKTVRLIEASVLSGAILGGAKAKELKALSSYGKNLGFAFQIVD 228
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD + +K+ G + TYP L G+ K AK +A L F+ + A
Sbjct: 229 DLLDILGDEKKLGKKTFSDVKKQKLTYPSLFGIEKTKELAKRYTEKAISALQPFEKS-AL 287
Query: 296 PLYHLADFLVSR 307
PL +A+F++ R
Sbjct: 288 PLKAIAEFVLYR 299
>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 312
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 33/223 (14%)
Query: 97 EGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------- 135
+G+R+ LC+ +CE VGG+ + +P ACA EM+ + L
Sbjct: 56 DGKRLRPILCLEACEWVGGSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALH 115
Query: 136 -----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL +A +A+ T+ V +R+ AI + A+GT G+ G+ +++
Sbjct: 116 KVHGEALAILAGDALLVHAFGLLAS-TRGVPAERVTVAIRRLCQALGTTGLAGGQALDVL 174
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ + V+ +LD + + E ++V G +GG +E L +YG +G A+Q+ DD
Sbjct: 175 SQTEGVTPEKLDHVHTWKTASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISDD 234
Query: 245 ILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELA 287
+LD +K + + Y +L GV GA+R +EL+ +A +A
Sbjct: 235 LLDARDEKGKVEGEVTNYVQLHGVEGARRKLRELLNQAVSSIA 277
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 48/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L IA+CE GG+ + +P+ACA EM+ T +L
Sbjct: 51 GKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHK 110
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A + A + V +R++ + +++ G RG++ G++ ++
Sbjct: 111 VFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVEDLAEYAGPRGMVGGQVADM 170
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ +L +L++I + LI S++ G + G S+ IE LR +G +GLA+Q+ D
Sbjct: 171 EGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDAQIESLRTFGHHIGLAFQIQD 230
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA---YFDPT 292
DILD + + + G ++ TYP +G+ ++ + L AEA + ++ + DP
Sbjct: 231 DILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERLTAEAKRVISEGNFADPA 290
Query: 293 RAAPLYHLADFLVSR 307
R L +ADFL++R
Sbjct: 291 R---LLEIADFLMAR 302
>gi|429727348|ref|ZP_19262122.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
gi|429152800|gb|EKX95610.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
Length = 295
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + + +L G +P + A EM+ T +L
Sbjct: 44 GKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHI 103
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL A E M T K+ P+ +RA EIS G G++ G+++++
Sbjct: 104 VFGEAMAILAGDALLNTAYETMLNATFKHPRPELSLRAAYEISRGAGIYGMIGGQVVDVE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ K ++ +LD+I + +I SV G ++ G E+ +E L KY + +GLA+Q+ DD
Sbjct: 164 SEDKKINKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDD 223
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +K G +D++TYP L+G++ +K+ + L+ EA L FD + A
Sbjct: 224 ILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGISESKKIVENLIEEAKISLEVFD-SDAEF 282
Query: 297 LYHLADFLVSRH 308
+ LADF+ R
Sbjct: 283 MNALADFIRDRQ 294
>gi|410667961|ref|YP_006920332.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
gi|409105708|gb|AFV11833.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
Length = 295
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ G L +A+ ++G E V+P A A EM+ T +L
Sbjct: 44 GKRLRGVLTLATAGMLGLEEERVLPAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRPTCHR 103
Query: 136 ----------NRALLCYAVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL A E ++ + + +++ I E++S G+RG++ G+++++
Sbjct: 104 VFGEAIAILAGDALLTLAFETLSRLAEGGFASSVVLQVIQEVASGAGSRGLVGGQVVDLE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GKD+ S L++I R + G L A++ G ++ G ++++ L Y + GLA+Q+ DD
Sbjct: 164 SEGKDIEASVLEYIHRHKTGALFRAAIRSGAILAGAGDKELTALTGYAEAFGLAFQITDD 223
Query: 245 ILD----NMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K K+ G D A TYP L G+ A+ A V + LA F P A
Sbjct: 224 ILDLAGSEEKLGKKTGRDLARGKVTYPGLFGMKKAREMAACQVEKCLMSLAVFGP-EAEF 282
Query: 297 LYHLADFLVSRH 308
L A +L+SR
Sbjct: 283 LREAALYLLSRQ 294
>gi|354558197|ref|ZP_08977453.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548922|gb|EHC18366.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 288
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA E +A + V+ +R +R I E++ A G G++ G+++++ ++GK ++L E++
Sbjct: 111 GLLTYAFELIA-RPLPVNAERQLRVIQEVAQAAGPEGMVLGQVLDLEAEGKTLTLGEIEQ 169
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + + G ++ S G ++GGG+E I+ L +Y + +GLA+Q+ DDILD G
Sbjct: 170 IHQHKTGAMLVVSARMGGILGGGTEAQIQALTRYAQALGLAFQIKDDILDLEGDSATLGK 229
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH-LADFLVSR 307
+++TYP L+G+AGAK + EA++ L+ F T++ H LAD++ R
Sbjct: 230 PAQSDLEQEKSTYPSLLGLAGAKEELAVKIKEAHEALSVF--TQSVDFLHSLADYIADR 286
>gi|390453366|ref|ZP_10238894.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus peoriae KCTC
3763]
Length = 307
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L IA+ E GG+ + +P+ACA EM+ T +L
Sbjct: 54 GKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHK 113
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A + A + +S D L+ + E+S G RG++ G++ ++
Sbjct: 114 VYGEAVAILAGDALLTHAFYSVVQAGRRHGISSDALLSIVEELSEMSGARGMVGGQVADM 173
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ + + EL++I + LI S++ G IGG ++ +E LR++G+ +GLA+Q+ D
Sbjct: 174 SGEQGLTGIEELEYIHLHKTADLIIFSLLAGGRIGGANKNQLEALRQFGRDLGLAFQIQD 233
Query: 244 DILD------NMKKKKEAG--DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD M KK ++ ++ TYP +G+ +++ ++L A A + L ++
Sbjct: 234 DILDLIGDESKMGKKTQSDVEQEKVTYPFFIGMEASQQQVEKLTATAKKALIEGGIPDSS 293
Query: 296 PLYHLADFLVSR 307
L +AD+L+ R
Sbjct: 294 RLLEIADYLMKR 305
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 44/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +C +VGG+ + +P A A EM+ T +L
Sbjct: 44 GKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHDDLPALDNDDLRRGRATNHK 103
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL +A E M ++ +P+R +RA EI+ G G++ G+++++
Sbjct: 104 VFGEAMAILAGDALLNFAYETMLKESIGKENPERYLRATYEIAKGAGIYGMVGGQVVDVQ 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ + +LD+I + ++ + G IGG E+ +E + Y +GLA+Q+ DD
Sbjct: 164 SENMQIPKEKLDYIHENKTAAMMVGCMRAGAAIGGADEKQMELITDYANKIGLAFQIVDD 223
Query: 245 IL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYF-DPTRAA 295
IL D K K G D ++TYP LMG+ ++ A EL+ +A + ++ D T
Sbjct: 224 ILDIVGDEAKLGKHVGSDIENNKSTYPSLMGLEKSREIATELIEDAKRSISKVTDDT--G 281
Query: 296 PLYHLADFLVSR 307
L LAD+++SR
Sbjct: 282 FLDGLADYILSR 293
>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
E681]
gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
[Paenibacillus polymyxa E681]
Length = 307
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 52/293 (17%)
Query: 65 EYMTLKAKKINKALFE----GAAVPLILQYPTLPNHE----GERVHGTLCIASCELVGGN 116
EY+T ++ AL E +P +L+ N+ G+R+ L IA+ E GG+
Sbjct: 15 EYLTGTTDVVSSALIEQFPADWNIPAVLRESM--NYSLTAGGKRLRPLLVIAAAEAFGGS 72
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
+ +P+ACA EM+ T +L ALL +A
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAF 132
Query: 145 EHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLR 202
+ A + VS D L+ + ++S G RG++ G++ +++ + + EL+FI +
Sbjct: 133 YSIVQAGRRHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIEELEFIHLHK 192
Query: 203 CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD------NMKKKKEAG 256
LI S++ G IGG + +E LR++G+ +GLA+Q+ DDILD M KK ++
Sbjct: 193 TADLIIFSLLAGGRIGGADKSQLEALRRFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 257 --DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ TYP +G+ + + +EL A A + + + L +AD+L+ R
Sbjct: 253 VEQEKVTYPYFIGMDASLQQVEELTASAKKVITESGIPDFSRLLEIADYLMKR 305
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 41/230 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ G +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTK-NVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + +A + + P +R I E++ A G G++AG++ +I
Sbjct: 106 VFGEAMAILAGDGLLTYAFQVIAEMSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIE 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK +SL +L++I R + GK+++ SV+ G L+ +E + L + +GLA+Q+ DD
Sbjct: 166 GEGKQLSLEQLEYIHRHKTGKMLQYSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDD 225
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQEL 286
ILD K K G D + TYP L+ +AGAK +AEA + L
Sbjct: 226 ILDIEGSEEKIGKRVGSDIENKKVTYPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| polyprenyl synthetase [Anaerofustis stercorihominis DSM 17244]
Length = 294
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 46/253 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + SC+ VGG+ + +PL A EM+ T +L
Sbjct: 43 GKRIRPILLMESCKCVGGDTNEALPLMAAMEMIHTYSLIHDDLPCMDDDELRRGKPTNHT 102
Query: 136 ----------NRALLCYAVEHM---ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
+LL A E M A +K+++ R V A+ I+ + G +G++AG++M+
Sbjct: 103 VYGEATALLAGDSLLNLAYETMLKGAKSSKDIN--RYVEAMNVIADSAGVKGMIAGQVMD 160
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ S+GK+ LDFI + G ++ ASV+ G ++GG ++++++ L +Y + +GL +QV
Sbjct: 161 MESEGKEPDGETLDFIHDNKTGAILRASVISGAVVGGATDDELKNLSEYARAIGLMFQVV 220
Query: 243 DDILDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + ++ G ++ TYP + G+ + EL+ + L+ F + A
Sbjct: 221 DDILDVVSDEETLGKKVGMDSERNKMTYPYVYGLERSYEKVDELLNISLNSLSDF-GSEA 279
Query: 295 APLYHLADFLVSR 307
L LA +L R
Sbjct: 280 DFLRELALYLAKR 292
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L IA+ E +G +M +AC+ E + T +L
Sbjct: 74 GKRVRPILTIAAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFRRGKPTNHK 133
Query: 136 ----------NRALLCYAVEHMATK--TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A + ++ K P R VR + E++ G G++ G++ +I
Sbjct: 134 VYGEAMAILAGDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGSGNMGMVGGQVFDI 193
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++ +D+ L L I + + G LI A+V G + G ++ ++ + Y + +GLA+Q+ D
Sbjct: 194 QAENQDIDLPTLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGYAEDIGLAFQIAD 253
Query: 244 DILDNMKKKKEAGDD--------EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+L+ ++E G + + TYP GV GA++ A + V A L F P+ A
Sbjct: 254 DVLNVTGTREELGKNPNTDAERGKKTYPTFYGVEGARKLADDCVTRAIGRLNTFGPS-AD 312
Query: 296 PLYHLADFLVSR 307
PL +A ++ +R
Sbjct: 313 PLREIARYITAR 324
>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
Length = 298
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + G E MP+ACA EM+ T +L
Sbjct: 47 GKRLRPLLVLATLKSFGKPEELGMPVACAVEMIHTYSLVHDDLPSMDDDDFRRGKPTNHK 106
Query: 136 ----------NRALLCYAVEHMATKTK-NVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL ++ E M +V P ++V + E++ A G G++ G++ ++
Sbjct: 107 VFGEAMAILAGDALLTHSFEVMEDLLNFDVKPMKVVTLMKELAKAAGPTGMVGGQVADME 166
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G +SL +L++I R + GKL+ S+V G ++G +EE I KL ++ +GLA+Q+ DD
Sbjct: 167 GEGAQLSLQDLEYIHRNKTGKLLGFSIVAGAILGDATEEQISKLEQFADHLGLAFQIRDD 226
Query: 245 IL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
IL D K K G D + TYP L+ + GAK + + EA + L P +
Sbjct: 227 ILDIEGDAAKIGKPVGSDTLNEKVTYPSLLSMNGAKEKLEYHIKEAKRILEEI-PLESDL 285
Query: 297 LYHLADFLVSR 307
L L D + R
Sbjct: 286 LGQLCDLIAKR 296
>gi|334341587|ref|YP_004546567.1| polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334092941|gb|AEG61281.1| Polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 296
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVG--GNESSVMPLACAAEMLVTLAL-------------------- 135
G+R+ L +A+ E VG +S MP+ACA E++ T +L
Sbjct: 44 GKRLRPILVLAAAEAVGDEAGAASAMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTN 103
Query: 136 ------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A E M SP + R + EI+ A G++G++ G++++
Sbjct: 104 HKVYGEAMAILAGDALLTTAFELMGQSAGKFSPQAVNRVVVEIAQAAGSQGLIGGQVVDT 163
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+ K V S L++I R + G L A++ G ++ G SEE ++ L Y + +GLA+Q+ D
Sbjct: 164 LSENKKVEASVLEYIHRHKTGALFRAAIRSGAILNGASEEQLQALTVYAEQMGLAFQIKD 223
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD ++++ G + +ATYP L G+ A++ A EA L F P +
Sbjct: 224 DLLDIEGEQEKIGKPVGSDVKNQKATYPALYGMEKARKMAGLAAEEAVAALKIFGP-KGE 282
Query: 296 PLYHLADFLVSR 307
L + F+++R
Sbjct: 283 FLRSIMHFIINR 294
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 49/260 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+R+ LC+A+CE +P ACA EM+ T +L +R
Sbjct: 58 GKRLRPILCLAACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHR 117
Query: 138 A------------LLCYAVEHMATKTKN---VSPDRLVRA--IGEISSAVGTRGVLAGRI 180
A LL +A + + ++ +N V PD VR + IS A G G++ G++
Sbjct: 118 AFGESTAILAGDGLLTHAFQ-ILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQM 176
Query: 181 MEINSKGKDVSLSELDF---IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
+++ + D +++ L+ I L+ G +I ASVV G + G IE L Y + +GL
Sbjct: 177 LDMLLQNADETVTSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGL 236
Query: 238 AYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYF 289
A+Q+ DDIL D K AG D + T+P MG+ +++YA+E++ EA + L F
Sbjct: 237 AFQIVDDILDVEGDPTVMGKTAGSDVDNRKMTFPSFMGLEASRKYAQEIINEAVKALDLF 296
Query: 290 DPTRAAPLYHLADFLVSRHK 309
D + PL +A +++ R +
Sbjct: 297 DEKKTLPLKAIAAYILQRKR 316
>gi|452974989|gb|EME74808.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus sonorensis
L12]
Length = 296
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 47/292 (16%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGN 116
++DE++ + I + L + P L+ L + E G+R+ L +A G
Sbjct: 4 RLDEFLNTRKALIEQRLPLYIQKLQAPSTLKQSMLYSLEAGGKRLRPILVLALLHAYGKK 63
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
E +P+ CA EM+ T +L ALL +
Sbjct: 64 EEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKIYGEATAVLAGDALLTESF 123
Query: 145 EHMATK-TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
+ + T + V ++ +R + E+ SA G G++ G+I+++ ++ K VSL EL I +
Sbjct: 124 KMITTHVSAEVPAEKRLRLVNELISAAGAEGMVGGQILDMEAESKPVSLQELQSIHEGKT 183
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDD- 258
KL+ SV+ G ++ EE+IEKLR++ +G+ +Q+ DDILD K K G D
Sbjct: 184 AKLLSFSVIAGAILADAPEEEIEKLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDT 243
Query: 259 ---EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++TYP L+ + GAK+ E + +A Q ++ + LY L D + R
Sbjct: 244 SNGKSTYPSLLSLEGAKQKLDEHIKKAKQLISELSLEQDL-LYELCDMIADR 294
>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|421503890|ref|ZP_15950835.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|400345394|gb|EJO93759.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
Length = 295
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + GN ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALDGNLDRADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E +A + +N + ++ I +SSA G G++ G+ +++
Sbjct: 103 AFDEASAILAGDGLQSLAFEVLADRRRNPQDAEVRLQMIDALSSAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWD 243
S G+ + + L+ + R + G LIEASV+ G L G ++E ++ L +Y + VGLA+QV D
Sbjct: 163 SVGQQLDQAALETMHRHKTGALIEASVLLGALASGNADELSLKALLQYARAVGLAFQVQD 222
Query: 244 DILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K+ +D+ TYP L+G+ AK YA EL +A L F ++A
Sbjct: 223 DILDVESDTATLGKTQGKDEANDKPTYPALLGLDAAKDYALELRDQALHVLRPFG-SQAE 281
Query: 296 PLYHLADFLVSRH 308
PL LA ++V R
Sbjct: 282 PLRELARYIVERR 294
>gi|410657101|ref|YP_006909472.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|410660137|ref|YP_006912508.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
gi|409019456|gb|AFV01487.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|409022493|gb|AFV04523.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
Length = 288
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 42/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A ELVGG ++ A A E++ T +L
Sbjct: 39 GKRIRPVLALACAELVGGRPEELVSEAAAIELIHTYSLIHDDLPAMDDDDYRRGKLSNHK 98
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A + + + +R I E + A G +G++ G+ ++
Sbjct: 99 VFGEAGAILAGDALLTLAFELLAGPSA-IEAQKKLRVIRETAQAAGWQGMVGGQSLDTLG 157
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
++ +L++++ + L+ G L++AS G ++GGGSE +IE L Y +GLA+Q+ DDI
Sbjct: 158 NLENSTLADIEQVHHLKTGALLKASARLGAILGGGSEPEIEILTSYALYLGLAFQIKDDI 217
Query: 246 LDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + + K AG D+ TYP L+G+ GA+ ++ + A + L+ F P +AA L
Sbjct: 218 LDVVGESAVIGKSAGKDQKSGKPTYPSLLGLEGAREQLEKTIFLAKESLSCFGP-KAAFL 276
Query: 298 YHLADFLVSR 307
LAD+ R
Sbjct: 277 LSLADYTAER 286
>gi|407473843|ref|YP_006788243.1| polyprenyl synthetase [Clostridium acidurici 9a]
gi|407050351|gb|AFS78396.1| polyprenyl synthetase [Clostridium acidurici 9a]
Length = 298
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 127/295 (43%), Gaps = 51/295 (17%)
Query: 62 QIDEYMTLKAKKINKAL-----FEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGN 116
+I +Y + K + K L F+G ++Y L G+R+ L + + ELV +
Sbjct: 6 EIKKYSDIIGKNLEKILPDNDCFQGTVCES-MKYSILAG--GKRIRPILTLKAFELVSKS 62
Query: 117 E-SSVMPLACAAEMLVTLAL--------------------------------NRALLCYA 143
+P A A EM+ T +L ALL +A
Sbjct: 63 SFEKALPFASAIEMIHTYSLIHDDLPPMDNDDFRRGKPTNHKVYGEAMAILAGDALLNFA 122
Query: 144 VEHMATKTKNVSPD--RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRL 201
E M S D ++AI EI A G G++ G++++I S +S +L FI
Sbjct: 123 YETMIESIPETSKDVSGYIKAIKEIGKAAGVYGMIGGQVVDIISDENIMSEEQLRFIHNK 182
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGD 257
+ LIEAS++ G + S+ I L+KYG+ +GL +Q+ DDIL DN K K G
Sbjct: 183 KTSALIEASILSGAFLANASDNQIIALKKYGEAIGLCFQIRDDILDKIGDNEKLGKSVGS 242
Query: 258 DEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
DEA TY L G+ + EL EA + L FD A++LV R
Sbjct: 243 DEANKKLTYLTLYGMEKSIEKTHELCKEAIEALDIFDSKDTIFFKQFAEYLVYRE 297
>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|424054464|ref|ZP_17791988.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425741380|ref|ZP_18859528.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|407439213|gb|EKF45738.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425492384|gb|EKU58643.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|452952719|gb|EME58146.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii MSP4-16]
Length = 303
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQVYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|445404323|ref|ZP_21430970.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
gi|444782485|gb|ELX06386.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
Length = 303
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 52/285 (18%)
Query: 74 INKALFEGAAVPLILQYPTLPNH-----------EGERVHGTLCIASCELVGGNESSVMP 122
I+++ FE A L+ Q LP G+RV L A+ EL G V
Sbjct: 10 IHQSRFEDAVGRLLPQTDVLPQRLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPIERVEI 69
Query: 123 LACAAEML--------------------------------VTLALNRALLCYAVEHMATK 150
A A E++ L + AL A + ++
Sbjct: 70 AAAAVELIHAYSLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEH 129
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEAS 210
+ P R ++ + +++A G+RG+ G+ +++ S GK +++ EL+ + + G LI A+
Sbjct: 130 RLSDDPSRQLQMVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQMHIYKTGALIRAA 189
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK--------KEAGDDEATY 262
++ G G + ++KL +YGKC+GLA+QV DD+LD+ K+ +D+ TY
Sbjct: 190 ILLGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTATLGKTAGKDKDNDKPTY 249
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L+GV AKR A L EA L F + A L+ LADF+V R
Sbjct: 250 VTLLGVQAAKRMAATLHQEALDTLKEFGAS-AQRLHDLADFIVMR 293
>gi|389571717|ref|ZP_10161806.1| geranyltranstransferase [Bacillus sp. M 2-6]
gi|388428611|gb|EIL86407.1| geranyltranstransferase [Bacillus sp. M 2-6]
Length = 296
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 47/291 (16%)
Query: 63 IDEYMTLKAKKINKALF---EGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNE 117
++E++T + + I LF + ++P L+ L + + G+R+ L +A G E
Sbjct: 5 LNEFLTTRKQAIEDYLFTYVQELSIPEELKSSMLYSLKAGGKRLRPVLVLALLNAYGKRE 64
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
+P+ CA EM+ T +L ALL +
Sbjct: 65 EDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFR 124
Query: 146 HMATK-TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCG 204
+ ++ + +V D+ +R I E+ ++ G G++ G+ ++ ++ K + LSEL+ I + G
Sbjct: 125 LITSQLSDDVPADQKLRIIDELVTSAGALGMVGGQFDDMEAEQKQIPLSELESIHARKTG 184
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA 260
KL+ SVV G ++ G +++IEKLR++ +G+A+Q+ DDILD K K G D A
Sbjct: 185 KLLTFSVVAGAILAGAPDDEIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRIGSDTA 244
Query: 261 ----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYP L+ ++GAK E + A + ++ + + L+ L D + SR
Sbjct: 245 NEKSTYPSLLTLSGAKEKLDEHITRAKEIVSNLELEQNL-LHDLCDLIASR 294
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VG + + ++P ACA EM+ T +L
Sbjct: 42 GKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHK 101
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A + + K+V L+R + EIS A G G++ G+++++ +
Sbjct: 102 VYGDGIAILAGDALLTLAFTVL-LRQKDVPAVSLLRVVDEISRAAGAEGMVGGQVLDLQA 160
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ K +SL EL + + G L A++ G ++GG SE+ + L Y GLA+Q+ DDI
Sbjct: 161 ENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLTALTAYADHFGLAFQITDDI 220
Query: 246 LDNMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + ++ G DE +TY L ++ A+ A+ V EA LA F + A+ L
Sbjct: 221 LDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELARRTVDEALAALAVF-GSEASFL 279
Query: 298 YHLADFLVSRHK 309
L +LV+R +
Sbjct: 280 RELVSYLVNRKQ 291
>gi|169794893|ref|YP_001712686.1| geranyltranstransferase [Acinetobacter baumannii AYE]
gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB056]
gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB058]
gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB059]
gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|417555685|ref|ZP_12206754.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|417560169|ref|ZP_12211048.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|421198439|ref|ZP_15655604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|421455317|ref|ZP_15904661.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|421620071|ref|ZP_16061013.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|421634937|ref|ZP_16075542.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|421642165|ref|ZP_16082691.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|421647240|ref|ZP_16087659.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|421650160|ref|ZP_16090540.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|421658083|ref|ZP_16098328.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|421673934|ref|ZP_16113870.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|421692226|ref|ZP_16131878.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|421699881|ref|ZP_16139402.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|421794768|ref|ZP_16230860.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|421799478|ref|ZP_16235470.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|421804600|ref|ZP_16240507.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|424058821|ref|ZP_17796314.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|425750513|ref|ZP_18868479.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|445448908|ref|ZP_21444054.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|445456889|ref|ZP_21446148.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
gi|445488898|ref|ZP_21458441.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|395522751|gb|EJG10840.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|395565335|gb|EJG26982.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|400211555|gb|EJO42517.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|400392102|gb|EJP59149.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|404560118|gb|EKA65363.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|404571156|gb|EKA76220.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|404664759|gb|EKB32736.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|408511199|gb|EKK12849.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|408513717|gb|EKK15331.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|408516676|gb|EKK18247.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|408701307|gb|EKL46741.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|408703203|gb|EKL48605.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|408711194|gb|EKL56405.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|410385277|gb|EKP37770.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|410403124|gb|EKP55225.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|410409716|gb|EKP61641.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|410411050|gb|EKP62932.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|425486634|gb|EKU53000.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|444757365|gb|ELW81890.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|444766892|gb|ELW91146.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|444777393|gb|ELX01423.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
Length = 303
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 146/299 (48%), Gaps = 47/299 (15%)
Query: 52 SNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--GERVHGTLCIAS 109
S+++ PF E+ TL +++ +AL + P IL+ + G+R+ L + S
Sbjct: 2 SDSSQPFKEMW-SNLQTLVNRQLEEALDQSGDCPPILKAAMSYSLSAGGKRLRPILVLLS 60
Query: 110 CELVGGNESSVMPLACAAEMLVTLAL--------------------------------NR 137
CE GG++S+ +P ACA EM+ T +L
Sbjct: 61 CEACGGDQSTALPAACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGD 120
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL A E +A + + S ++++A G G++ G++ ++ S+ ++ +L L+
Sbjct: 121 ALLTRAFELLANQIEVKSC--AAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILE 178
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD------NMK 250
I + + G+LI +++ G IGG ++ L +YG C+GLA+Q+ DD+LD M
Sbjct: 179 AIHKRKTGRLICSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEKMG 238
Query: 251 K--KKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K +K+A + TYP L+GV ++R ++ L+ EA +A + L LA F++ R
Sbjct: 239 KGVRKDADHGKLTYPSLIGVEESRRRSQNLIEEACLSIAPLG-SHGQRLEELAHFILER 296
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
LL YA E +AT K ++ ++ V+ I +S G G++ G+ +++ S+G+ ++L L +
Sbjct: 118 LLTYAFELLATD-KYLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLL 176
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG-- 256
R + LI ASV G ++ +EE + +R++G+ +GLA+Q+ DDILD + + G
Sbjct: 177 HRNKTAALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRK 236
Query: 257 ------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D++TY L+G+ AK YA +A L P + L HLADF++ RH
Sbjct: 237 IGSDILKDKSTYVSLLGIEQAKAYALNFYQKAINALKLL-PYDNSFLIHLADFIIHRH 293
>gi|403674867|ref|ZP_10937091.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. NCTC 10304]
Length = 303
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|421656213|ref|ZP_16096523.1| polyprenyl synthetase [Acinetobacter baumannii Naval-72]
gi|408506161|gb|EKK07876.1| polyprenyl synthetase [Acinetobacter baumannii Naval-72]
Length = 303
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLKQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|424742421|ref|ZP_18170743.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
gi|422944037|gb|EKU39042.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
Length = 303
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A T ++ G+I+++ ++ K + EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATATSKMVCGQILDLQAEAKQIVQEELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGD-NAKELVDISQFLLAR 301
>gi|298709043|emb|CBJ30993.1| Geranylgeranyl pyrophosphate synthetase, chloroplast precursor
[Ectocarpus siliculosus]
Length = 142
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 9/137 (6%)
Query: 179 RIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLA 238
++M++ + KDV L EL +I R + G L++ + G L+GG S++D++ + + + +GLA
Sbjct: 5 QVMDLECEDKDVGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSESIGLA 64
Query: 239 YQVWDDILD----NMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFD 290
+QV DDILD + + K AG DEA TYPKLMG+ GAK+ A+ LV EA++ L +
Sbjct: 65 FQVADDILDCTATSEQLGKTAGKDEAVNKTTYPKLMGMDGAKKEARRLVDEAHKALEPY- 123
Query: 291 PTRAAPLYHLADFLVSR 307
+A PL +AD+++ R
Sbjct: 124 GEKARPLLAIADYIIER 140
>gi|423483771|ref|ZP_17460461.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
gi|401141322|gb|EJQ48877.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
Length = 297
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVFELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++SEL++I + + GKL+E +V+ G +I +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTISELEYIHKHKTGKLLEFAVLAGAIISDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGIEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEETIAKAKDSIS 276
>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++AG+++++ ++GK V +EL+ I R + G LI+A+++ G V + G++ I K
Sbjct: 155 ATASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDPAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD K AG DE +TYP LMG+ AK YA+ L
Sbjct: 215 LRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKTYAQTLH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A LAYF +A L ++ FL++R
Sbjct: 275 DQAFDALAYFGD-QAQELTAISHFLLAR 301
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 12/181 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGT-RGVLAGRIMEINSKGKDVSLSELD 196
AL YA E MA + + + R V+ I E++ A GT G++ G+++++ ++ + ++
Sbjct: 138 ALQTYAYEVMA-RLRTTAEAR-VQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVE 195
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK---- 252
+I R + G LI ASVV G L G + ++++R++GK GLA+Q+ DD+LD +
Sbjct: 196 YIHRSKTGALITASVVAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQTSEQLG 255
Query: 253 KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
K AG D ++T+P L GV + A ELV AN+ L F RA L LA FLV R
Sbjct: 256 KTAGKDTKSEKSTWPSLYGVDKSLEMADELVYTANKRLDSFGE-RATTLKELAKFLVERK 314
Query: 309 K 309
K
Sbjct: 315 K 315
>gi|77361281|ref|YP_340856.1| geranyltranstransferase [Pseudoalteromonas haloplanktis TAC125]
gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
Length = 295
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E +A N S V+ I E++ A G +G++AG+ ++I + K ++++EL+
Sbjct: 116 ALQALAFELIAKHNFNCSAQAQVKMIAELAHASGLQGMVAGQGLDIAATDKVITVAELER 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKK 252
I +L+ G LI ++ G L S+ +E L +G +GLA+QV DDIL D +
Sbjct: 176 IHKLKTGALISCAITLGALCSNNVSQNTLENLATFGYAIGLAFQVHDDILDVEGDTVTLG 235
Query: 253 KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G D +ATYP L+G+ GAK A+ L+ +A+ LA D +A L LA++L+ R
Sbjct: 236 KPQGSDIAANKATYPALLGMLGAKEKAQNLIQQAHAALANIDADTSA-LASLANYLIER 293
>gi|402571586|ref|YP_006620929.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
gi|402252783|gb|AFQ43058.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
Length = 288
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 41/214 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +AS E VGG S++ A A E++ T +L
Sbjct: 39 GKRIRPVLALASAEAVGGKPESILRAAAALELIHTYSLIHDDLPAMDNDDYRRGRLANHK 98
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E +A+ P+R +R I E++ A G G++ G++ +I +
Sbjct: 99 IYGEAGAILAGDALLTYAFELLASLELG-QPERELRIIREVAVASGKDGMVRGQVADITA 157
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK ++L E++ I + + G ++ S G ++GGGSE+DI+ L Y + +GLA+Q+ DDI
Sbjct: 158 EGKVLTLPEIEEIHKGKTGAILTVSARLGGVLGGGSEDDIQALTDYAQALGLAFQIKDDI 217
Query: 246 LDNMKKK----KEAGDD----EATYPKLMGVAGA 271
LD + K AG D ++TY L+G+ GA
Sbjct: 218 LDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEGA 251
>gi|13383243|dbj|BAB39472.1| putative GGPP synthase 1 [Metaplexis japonica]
Length = 127
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
+LL +A E++AT T V P R++ AIGE++ ++GT G++AG++++++ GK +V L +L+
Sbjct: 26 SLLAFAFEYIATATAGVEPARVLAAIGELAKSIGTEGLVAGQVVDLSCTGKSNVGLDQLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+EASVV G ++GGG++E++EKLR++ +C+GL
Sbjct: 86 FIHIHKTAALLEASVVLGAILGGGTQEEVEKLRRFARCIGL 126
>gi|421697073|ref|ZP_16136649.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
gi|404560036|gb|EKA65286.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
Length = 303
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 93/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S +EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQNELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
Length = 303
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++AG+++++ ++GK V +EL+ I R + G LI+A+++ G V + G++ I K
Sbjct: 155 ATASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDPAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD K AG DE +TYP LMG+ AK YA+ L
Sbjct: 215 LRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKTYAQTLH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A LAYF +A L ++ FL++R
Sbjct: 275 DQAFDALAYFGD-QAQELTAISHFLLAR 301
>gi|345861767|ref|ZP_08814019.1| geranyltranstransferase [Desulfosporosinus sp. OT]
gi|344325160|gb|EGW36686.1| geranyltranstransferase [Desulfosporosinus sp. OT]
Length = 277
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 41/215 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +AS E VGG+ ++P A A E++ T +L
Sbjct: 28 GKRIRPVLALASAEAVGGSSELILPAAVALELIHTYSLIHDDLPAMDNDDYRRGRLSNHK 87
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA E +A + S +R +R I E++ A G G++ G++ ++
Sbjct: 88 VFGEAQAILAGDALLTYAFEFLADEGLGQS-ERQLRIIREVAVAAGKVGMVGGQVADVAG 146
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK ++L+E++ I + + G L+ S G ++ GG+EE ++ L Y + +GLA+Q+ DDI
Sbjct: 147 EGKTLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEEQVKALTDYAQALGLAFQIKDDI 206
Query: 246 LDNMKKK----KEAGDD----EATYPKLMGVAGAK 272
LD + K AG D +ATY L+G+ GA+
Sbjct: 207 LDVVGDSATLGKPAGSDLRQGKATYVSLLGLEGAE 241
>gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SS3/4]
Length = 297
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 48/254 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L L GGN + P A EM+ T +L
Sbjct: 46 GKRLRPLLMREVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVS----PDRLVRAIGEISSAVGTRGVLAGRIM 181
AL+ YA E T +K S P + RAIG ++ G G++ G+ +
Sbjct: 106 AYGYDMAVLAGDALMIYAFE---TASKAFSMGADPAKAGRAIGILAEKTGIYGMIGGQTV 162
Query: 182 EINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
++ GK V +LDFI RL+ G L+EAS++ G ++ G + E+I+++ VGLA+Q+
Sbjct: 163 DVELTGKAVPREKLDFIYRLKTGALLEASMMIGAVLAGATVEEIKEVETMASEVGLAFQI 222
Query: 242 WDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR 293
DDILD ++E G +++ TY L G+ AKR KE+ A LA P +
Sbjct: 223 QDDILDVTSTQEELGKPVLSDEKNEKTTYVTLEGLEKAKRDVKEISDRAAGRLAGL-PGK 281
Query: 294 AAPLYHLADFLVSR 307
LY++ + LV+R
Sbjct: 282 NEFLYNIIEMLVNR 295
>gi|392539641|ref|ZP_10286778.1| geranyltranstransferase [Pseudoalteromonas marina mano4]
Length = 295
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 23/208 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G +++ A + L TLA E +AT N S V+ I ++
Sbjct: 100 TCHIVYGEAQAIL----AGDALQTLAF---------ELIATHNFNCSAQSQVKMIAALAH 146
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIG-GGSEEDIEK 227
A G G++AG+ ++I + K VS+ EL+ I +L+ G LI ++ G L E+ +E
Sbjct: 147 ASGIEGMVAGQGLDIAATDKAVSVQELERIHKLKTGALINCAITLGALCSEKADEQTLEN 206
Query: 228 LRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELV 279
L +G +GLA+QV DDIL D K G D +ATYP L+G+ GAK A+ L+
Sbjct: 207 LSVFGYAIGLAFQVHDDILDVEGDTFILGKPQGSDIEANKATYPALLGMLGAKEKAQNLI 266
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A++ LA D L LA++L+ R
Sbjct: 267 TQAHEALALIDA-DTTLLASLANYLIER 293
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 50/238 (21%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
+ Y T +IN+ L E A+P+ ++Y LP +R +C+A+CEL
Sbjct: 45 FDLRTYWTTLITEINQKLDE--AIPVKHPAGIYEAMRYSVLPQGP-KRAPPVMCVAACEL 101
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
GG+ + P ACA EM+ +L AL
Sbjct: 102 FGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALF 161
Query: 141 CYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
A +H+ + T V ++R I EI+ VG+ G+ AG+ +++ +G LS F+
Sbjct: 162 PLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FV 216
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+ + G + E S VCG L+GG +E++++ LR+YG+ VG+ YQV DDI ++ KK + G
Sbjct: 217 QEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGG 274
>gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|384133023|ref|YP_005515635.1| geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|384144439|ref|YP_005527149.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-ZJ06]
gi|385238771|ref|YP_005800110.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|387122748|ref|YP_006288630.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-TJ]
gi|416148795|ref|ZP_11602556.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AB210]
gi|417545595|ref|ZP_12196681.1| polyprenyl synthetase [Acinetobacter baumannii OIFC032]
gi|417569621|ref|ZP_12220479.1| polyprenyl synthetase [Acinetobacter baumannii OIFC189]
gi|417576287|ref|ZP_12227132.1| polyprenyl synthetase [Acinetobacter baumannii Naval-17]
gi|417868705|ref|ZP_12513711.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH1]
gi|417874600|ref|ZP_12519449.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH2]
gi|417876515|ref|ZP_12521279.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH3]
gi|417882534|ref|ZP_12526829.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH4]
gi|421202914|ref|ZP_15660059.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC12]
gi|421536488|ref|ZP_15982731.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC30]
gi|421627735|ref|ZP_16068537.1| polyprenyl synthetase [Acinetobacter baumannii OIFC180]
gi|421667881|ref|ZP_16107931.1| polyprenyl synthetase [Acinetobacter baumannii OIFC087]
gi|421672487|ref|ZP_16112442.1| polyprenyl synthetase [Acinetobacter baumannii OIFC099]
gi|421686106|ref|ZP_16125865.1| polyprenyl synthetase [Acinetobacter baumannii IS-143]
gi|421704593|ref|ZP_16144037.1| geranyltranstransferase [Acinetobacter baumannii ZWS1122]
gi|421708370|ref|ZP_16147748.1| geranyltranstransferase [Acinetobacter baumannii ZWS1219]
gi|421792088|ref|ZP_16228246.1| polyprenyl synthetase [Acinetobacter baumannii Naval-2]
gi|421809983|ref|ZP_16245813.1| polyprenyl synthetase [Acinetobacter baumannii OIFC035]
gi|424051125|ref|ZP_17788659.1| hypothetical protein W9G_03426 [Acinetobacter baumannii Ab11111]
gi|424062285|ref|ZP_17799772.1| hypothetical protein W9M_02486 [Acinetobacter baumannii Ab44444]
gi|425754738|ref|ZP_18872590.1| polyprenyl synthetase [Acinetobacter baumannii Naval-113]
gi|445464261|ref|ZP_21449560.1| polyprenyl synthetase [Acinetobacter baumannii OIFC338]
gi|445479014|ref|ZP_21455036.1| polyprenyl synthetase [Acinetobacter baumannii Naval-78]
gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|333364839|gb|EGK46853.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AB210]
gi|342228466|gb|EGT93352.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH2]
gi|342232470|gb|EGT97248.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH1]
gi|342237516|gb|EGU01984.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH3]
gi|342237718|gb|EGU02176.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH4]
gi|347594932|gb|AEP07653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-ZJ06]
gi|385877240|gb|AFI94335.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-TJ]
gi|395553844|gb|EJG19850.1| polyprenyl synthetase [Acinetobacter baumannii OIFC189]
gi|395569508|gb|EJG30170.1| polyprenyl synthetase [Acinetobacter baumannii Naval-17]
gi|398327635|gb|EJN43768.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC12]
gi|400383483|gb|EJP42161.1| polyprenyl synthetase [Acinetobacter baumannii OIFC032]
gi|404569609|gb|EKA74695.1| polyprenyl synthetase [Acinetobacter baumannii IS-143]
gi|404666236|gb|EKB34187.1| hypothetical protein W9G_03426 [Acinetobacter baumannii Ab11111]
gi|404672328|gb|EKB40161.1| hypothetical protein W9M_02486 [Acinetobacter baumannii Ab44444]
gi|407189888|gb|EKE61110.1| geranyltranstransferase [Acinetobacter baumannii ZWS1122]
gi|407190426|gb|EKE61644.1| geranyltranstransferase [Acinetobacter baumannii ZWS1219]
gi|408710377|gb|EKL55604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC180]
gi|409985573|gb|EKO41783.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC30]
gi|410378557|gb|EKP31168.1| polyprenyl synthetase [Acinetobacter baumannii OIFC099]
gi|410381943|gb|EKP34502.1| polyprenyl synthetase [Acinetobacter baumannii OIFC087]
gi|410401058|gb|EKP53218.1| polyprenyl synthetase [Acinetobacter baumannii Naval-2]
gi|410413774|gb|EKP65589.1| polyprenyl synthetase [Acinetobacter baumannii OIFC035]
gi|425496276|gb|EKU62411.1| polyprenyl synthetase [Acinetobacter baumannii Naval-113]
gi|444774050|gb|ELW98139.1| polyprenyl synthetase [Acinetobacter baumannii Naval-78]
gi|444779702|gb|ELX03677.1| polyprenyl synthetase [Acinetobacter baumannii OIFC338]
Length = 303
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A LA+F A L ++ FL++R
Sbjct: 275 DQAFDALAHFGEN-AKELVEISQFLLAR 301
>gi|445434489|ref|ZP_21440102.1| polyprenyl synthetase [Acinetobacter baumannii OIFC021]
gi|444756471|gb|ELW81016.1| polyprenyl synthetase [Acinetobacter baumannii OIFC021]
Length = 303
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFFGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333924276|ref|YP_004497856.1| polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333749837|gb|AEF94944.1| Polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 294
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 121/250 (48%), Gaps = 41/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L IA+ E VGG+ VMP+ACA E++ T +L
Sbjct: 44 GKRLRPILTIAAAEAVGGSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A VSPD++ + EI+ A G+ G++ G++++ S
Sbjct: 104 VYGEAMAILVGDALLTQAFEVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLS 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ + + L++I R + G L +V G ++ G S E++ L Y + +GLA+Q+ DD+
Sbjct: 164 EDQVIDGQVLEYIHRHKTGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDL 223
Query: 246 L----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
L D K K G D +ATYP L G+ A+ A AEA L F P +A L
Sbjct: 224 LDIEGDEAKIGKPVGSDVKNKKATYPALYGLEKAREMAARAAAEAVAALEIFGP-KAEFL 282
Query: 298 YHLADFLVSR 307
+ F+++R
Sbjct: 283 RSIMHFIINR 292
>gi|410478476|ref|YP_006766113.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|424866252|ref|ZP_18290093.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
gi|387223049|gb|EIJ77421.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|406773728|gb|AFS53153.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E +G + +PL E++ T +L
Sbjct: 51 GKRIRPVLAMAAIEALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHV 110
Query: 136 ----------NRALLCYAVEHMAT--KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A ++ K VS + ++ I E+S G G++ G+ M+I
Sbjct: 111 IYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDI 170
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+GK ++LS L+F+ + + G LI AS+ G L+G S D E L +YG+ VG+A+Q+ D
Sbjct: 171 ASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIAD 230
Query: 244 DILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD +K+ + TYP LMGV A+ A+ + EA ++ F +A
Sbjct: 231 DLLDVEGDAALLGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEALDAISSFG-EKAK 289
Query: 296 PLYHLADFLVSR 307
L LA +++ R
Sbjct: 290 HLRELASYIIER 301
>gi|381159562|ref|ZP_09868794.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
gi|380877626|gb|EIC19718.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
Length = 297
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 126/251 (50%), Gaps = 43/251 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ TL A+ VG + ACA E++ T +L
Sbjct: 47 GKRLRPTLAYAAASAVGVTREQIDAAACALELIHTYSLIHDDLPAMDDDDLRRGQPTCHK 106
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL A + +AT + N + D +R I ++ A G+RG++AG+ +++ S
Sbjct: 107 AFDEATAILAGDALQTLAFQWLATDSAN-TVDARIRMIEVLARAAGSRGMVAGQALDLAS 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIG-GGSEEDIEKLRKYGKCVGLAYQVWDD 244
+G+ + + L+ I + G LI+ASV L+ + E L Y +C+GLA+Q+ DD
Sbjct: 166 EGQALDRAALENIHLHKTGALIQASVNMAALVKPETTGEQASALDGYARCIGLAFQIQDD 225
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD + K++G D +ATYP L+G+ A + A L+ EA++ L+ FD + A P
Sbjct: 226 LLDVEGQTEVLGKQSGQDAAHHKATYPSLLGIDAAHKEAARLIEEAHRCLSGFD-SGADP 284
Query: 297 LYHLADFLVSR 307
L +AD++++R
Sbjct: 285 LRWIADYIIAR 295
>gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AB900]
gi|421678341|ref|ZP_16118226.1| polyprenyl synthetase [Acinetobacter baumannii OIFC111]
gi|410392528|gb|EKP44889.1| polyprenyl synthetase [Acinetobacter baumannii OIFC111]
Length = 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSNTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
Length = 334
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 84/330 (25%)
Query: 62 QIDEYMTLKA----KKINKALFEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGG 115
+ ++Y+ KA K ++K + + A P +++ + E G+RV L +A+ E G
Sbjct: 3 EFEKYLKTKAAFVEKGLSKYILKIANSPEVIKDSMAYSLEAGGKRVRPVLVMAAAEAFGK 62
Query: 116 NESSVMPLACAAEMLVTLAL---------NRAL-----------------------LCYA 143
+ VMP ACA EM+ T +L N +L L YA
Sbjct: 63 KAADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNHKVYGEDLALLAGDALLTYA 122
Query: 144 VEHMATK--TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-------------- 187
E A K++ ++A+ ++ VG+ G++ G++ +I ++G
Sbjct: 123 FEVFAQNGDVKSIGHKNTLKALQLFANGVGSEGMVGGQVTDIYAEGLIEGKFKRITAVKK 182
Query: 188 -------------------KDVSL-SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEK 227
K+VS + L +I + G LI +S+ G ++ G SE D
Sbjct: 183 ESKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALIRSSIEAGAVLAGASEADRAN 242
Query: 228 LRKYGKCVGLAYQVWDDILD---NMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVA 280
+RKYG +GLA+Q+ DDILD + KK ++G D+ T+ L G+ +++YAK ++
Sbjct: 243 MRKYGNAMGLAFQIVDDILDVTVSEKKLGKSGSDKENAKLTFVSLYGLEVSRKYAKAVLG 302
Query: 281 EANQEL---AYFDPTRAAPLYHLADFLVSR 307
EA L + +AAPLY +ADF ++R
Sbjct: 303 EAVNALNKVKAINKKKAAPLYEMADFFLTR 332
>gi|169632576|ref|YP_001706312.1| geranyltranstransferase [Acinetobacter baumannii SDF]
gi|421662787|ref|ZP_16102943.1| polyprenyl synthetase [Acinetobacter baumannii OIFC110]
gi|421789739|ref|ZP_16225986.1| polyprenyl synthetase [Acinetobacter baumannii Naval-82]
gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii]
gi|408714303|gb|EKL59454.1| polyprenyl synthetase [Acinetobacter baumannii OIFC110]
gi|410397655|gb|EKP49899.1| polyprenyl synthetase [Acinetobacter baumannii Naval-82]
Length = 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
Length = 295
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL------------------------ 133
G+RV L A+CE +GG ACA E++
Sbjct: 43 GKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 134 ALNRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + A A + + + + S + +R + ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWD 243
S G + L+++ R + G LIEASV+ G L G +E+ +++ L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQQALEYMHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQD 222
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K++ A D+ TYP L+G+A AK YA EL +A L FD A
Sbjct: 223 DILDVESDTATLGKRQGADIARDKPTYPALLGLAAAKEYALELRDQALHALRPFDAA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|417573387|ref|ZP_12224241.1| polyprenyl synthetase domain protein [Acinetobacter baumannii
Canada BC-5]
gi|400208955|gb|EJO39925.1| polyprenyl synthetase domain protein [Acinetobacter baumannii
Canada BC-5]
Length = 143
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 90/142 (63%), Gaps = 10/142 (7%)
Query: 175 VLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEKLRKYGK 233
++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I KLR+YG+
Sbjct: 1 MVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQ 60
Query: 234 CVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQE 285
+GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL +A +
Sbjct: 61 AIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEA 120
Query: 286 LAYFDPTRAAPLYHLADFLVSR 307
LA+F A L ++ FL++R
Sbjct: 121 LAHFGE-NAKELVEISQFLLAR 141
>gi|452852192|ref|YP_007493876.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
gi|451895846|emb|CCH48725.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
Length = 299
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN-SKGKDVSLSELDFIK 199
+ + A+ K + DR++RAI ++ A G G++ G+ +++ + G V+L +L +
Sbjct: 122 AFGLMSTASIVKGLPADRVLRAIAVLAHAAGASGMVGGQAVDMELTGGTSVALEQLRIMH 181
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEA 255
++ G LI A+ CG ++ G +E DIE R+YG+ +G+A+Q+ DDILD + K A
Sbjct: 182 AMKTGALITAACECGAILSGSTEADIENAREYGQAIGVAFQIVDDILDVVSDTETLGKPA 241
Query: 256 GDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G DEA TYP L+G+ +K A+ V A + L + L LA ++V R
Sbjct: 242 GSDEAMGKSTYPALIGLDKSKALARRHVDSALERLTTYAGAEHQFLADLARYIVDR 297
>gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Alteromonadales bacterium TW-7]
gi|359451161|ref|ZP_09240572.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20480]
gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Alteromonadales bacterium TW-7]
gi|358043015|dbj|GAA76821.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20480]
Length = 295
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 23/208 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G +++ A + L TLA E +AT N S V+ I ++
Sbjct: 100 TCHIVYGEAQAIL----AGDALQTLAF---------ELIATHNFNCSAQSQVKMIAALAH 146
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIG-GGSEEDIEK 227
A G G++AG+ ++I + K VS+ EL+ I +L+ G LI ++ G L E+ +E
Sbjct: 147 ASGIEGMVAGQGLDIAATDKVVSVQELERIHKLKTGALINCAITLGALCSEKADEQTLEN 206
Query: 228 LRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELV 279
L +G +GLA+QV DDIL D K G D +ATYP L+G+ GAK A+ L+
Sbjct: 207 LSVFGYAIGLAFQVHDDILDVEGDTFILGKPQGSDIEANKATYPALLGMLGAKEKAQNLI 266
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A++ LA D L LA++L+ R
Sbjct: 267 TQAHEALALIDA-DTTLLASLANYLIER 293
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 101/180 (56%), Gaps = 11/180 (6%)
Query: 138 ALLCYAVEHMAT--KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSEL 195
ALL +A ++ K VS + ++ I E+S G G++ G+ M+I S+GK ++LS L
Sbjct: 123 ALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGINGMVGGQQMDIASEGKALNLSSL 182
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD-------- 247
+F+ + + G LI AS+ G L+G S D E+L +YG+ VG+A+Q+ DD+LD
Sbjct: 183 EFLHQHKTGALIRASLRIGALLGKASSSDFERLDRYGQAVGIAFQIADDLLDVEGDAALL 242
Query: 248 NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+K+ + TYP LMGV A+ A+ + EA + + F +A L LA +++ R
Sbjct: 243 GKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEALEAIGSF-GEKAKHLRELASYIIER 301
>gi|126642791|ref|YP_001085775.1| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
Length = 259
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 111 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 170
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 171 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 230
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 231 DQAFEALAHFGEN-AKELVEISQFLLAR 257
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 52/306 (16%)
Query: 53 NNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPL----------ILQYPTLPNHEGERVH 102
N P + + + + I +AL A P ++Y L G+R+
Sbjct: 2 NAPEKLPLFTLSAWSAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVLDG--GKRLR 59
Query: 103 GTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------------- 135
L +A+CE V GN + + ACA E++ +L
Sbjct: 60 PLLVMAACEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEA 119
Query: 136 -----NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV 190
AL A E + +V R ++ A G +G+ G+ +++ S G +
Sbjct: 120 QALLAGDALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPL 179
Query: 191 SLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--- 247
+ +L + RL+ G L++ASV+ G G LR+YG VGLA+QV DDILD
Sbjct: 180 TSGQLHEMHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTA 239
Query: 248 -----NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLAD 302
K+A D+ T+ LMG+ +K YA++L+ +A L L+ LAD
Sbjct: 240 DSATLGKTAGKDAAQDKPTFVSLMGLQASKDYAQQLLGKALASLDASGLGNTHALHALAD 299
Query: 303 FLVSRH 308
LV+RH
Sbjct: 300 MLVNRH 305
>gi|433444536|ref|ZP_20409408.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001564|gb|ELK22439.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 290
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 106/180 (58%), Gaps = 14/180 (7%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL YA + +A K +S D VR I E++ A G G++ G++ ++ +GK +SL +L++
Sbjct: 113 ALLTYAFQVVADD-KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEY 171
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I R + GKL++ SV G ++G +E+ + L + +GLA+Q+ DDILD +++ G
Sbjct: 172 IHRHKTGKLLQYSVRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGK 231
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQEL--AYFDPTRAAPLYHLADFLVSR 307
+D++TYP L+ + GAK+ + + EA + L A D A+ L+++ D + +R
Sbjct: 232 KVGSDIENDKSTYPSLLTLDGAKKKLSDHMKEARKLLDEAKID---ASLLHYICDIVETR 288
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 48/288 (16%)
Query: 65 EYMTLKAKKINKALF----EGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSV 120
EY L KK++ L + V ++Y G+R+ + IA+ L N V
Sbjct: 9 EYQILTDKKLHHYLDVKEDKNKTVIDAMRYSIFAG--GKRLRPIVAIATYNLFKDNLEEV 66
Query: 121 MPLACAAEMLVTLAL--------------------------------NRALLCYAVEHMA 148
+P ACA EM+ T +L ALL YA E M
Sbjct: 67 LPYACALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALLNYAFEIMI 126
Query: 149 TKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLI 207
+ + S + ++AI EI+ A G G++ G+++++ S+ K V + L++I + LI
Sbjct: 127 SHARTQSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIHYNKTAALI 186
Query: 208 EASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDD--------E 259
++ G +I +E DI + GK +GLA+Q+ DDILD + +K+ G D +
Sbjct: 187 ISAFKVGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKKLGKDIGSDVENNK 246
Query: 260 ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+TYP L G+ + K L ++ L + R+ L+ L+ +LV+R
Sbjct: 247 STYPSLYGLQTSIDEVKRLTTNVDKVLNIY-GKRSRFLHDLSHYLVNR 293
>gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|421855820|ref|ZP_16288193.1| geranyltranstransferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|403188653|dbj|GAB74394.1| geranyltranstransferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 302
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G++M++ ++GK V S+L+ I R + G LI+A+++ V I G+++ I +
Sbjct: 154 ATASSKMVCGQVMDLQAEGKQVDQSQLENIHRNKTGALIQAAIMMAAVTIFNGTDQAIPQ 213
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD + + K AG DE +TYP LMG+ A+ YAK+L
Sbjct: 214 LRQYGQAIGLAFQVQDDILDIVSETEVLGKTAGKDEQVEKSTYPALMGLEQAQLYAKQLH 273
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A L YF A L ++ FL+SR
Sbjct: 274 DQAFSALEYFGEA-AEELNTISRFLLSR 300
>gi|386390595|ref|ZP_10075380.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
gi|385692812|gb|EIG23482.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
Length = 297
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 18/183 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A + ++P + +R I ++ A G +G+ G+ +++ ++ K VSL EL+
Sbjct: 118 ALQSFAFELIADD-ELLTPLQKIRQIQSLAKAAGAKGMCLGQNLDLLAENKAVSLEELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED-IE-KLRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LIEASV+ G + +E+ IE +L++Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALIEASVLMGFNLSDYAEDKYIEMQLQRYAQAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKEL---VAEANQELAYFDPTRAAPLYHLADFL 304
K AG DE +TYPKL+G+ GA++ A++L +A EL FD T L LADF+
Sbjct: 237 GKTAGADEQHNKSTYPKLLGLEGAQQKAQKLYQVAIDALNELN-FDTT---ALKELADFI 292
Query: 305 VSR 307
+ R
Sbjct: 293 IHR 295
>gi|359430871|ref|ZP_09221855.1| geranyltranstransferase [Acinetobacter sp. NBRC 100985]
gi|358233764|dbj|GAB03394.1| geranyltranstransferase [Acinetobacter sp. NBRC 100985]
Length = 303
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 93/149 (62%), Gaps = 10/149 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V +EL+ I R + G LI+A+++ G V + G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEGKQVDQAELENIHRNKTGALIQAAIMMGAVTVFAGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD K AG DE +TYP LMG+A A+ YA+ L
Sbjct: 215 LRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLAQAQAYAQTLH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSRH 308
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAFFGED-AKDLTAISQFLLARQ 302
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 41/242 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +++ +G + + +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + + + + P +R I ++ A G G++AG+ ++
Sbjct: 106 VFGEAMAILAGDGLLTYAFQLIVEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK ++LSEL++I R + GK+++ SV G LIGG +L ++ +GLA+Q+ DD
Sbjct: 166 GEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDD 225
Query: 245 ILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K K G D+ ATYP L+ +AGAK + A + L + D AA
Sbjct: 226 ILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLAFHIEAAQRHLRHADVDGAAL 285
Query: 297 LY 298
Y
Sbjct: 286 AY 287
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|448238671|ref|YP_007402729.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|445207513|gb|AGE22978.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
Length = 297
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 112/216 (51%), Gaps = 41/216 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + +G + + +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL YA + MA V P ++ I +++ A G G++AG+ ++
Sbjct: 106 VFGEAMAILAGDALLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGPEGMVAGQAADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++L+EL++I R + GK+++ SV G L+GG +L ++ +GLA+Q+ DD
Sbjct: 166 AEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDD 225
Query: 245 ILD--NMKKK--KEAGDD----EATYPKLMGVAGAK 272
ILD M++K K G D +ATYP L+ + GAK
Sbjct: 226 ILDIEGMEEKIGKRVGSDRDNKKATYPVLLSLGGAK 261
>gi|431931138|ref|YP_007244184.1| geranylgeranyl pyrophosphate synthase [Thioflavicoccus mobilis
8321]
gi|431829441|gb|AGA90554.1| geranylgeranyl pyrophosphate synthase [Thioflavicoccus mobilis
8321]
Length = 298
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 40/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML-------------VTLALNRA-LLCY- 142
G+R+ L A+ + +G V ACA E++ L R L C+
Sbjct: 47 GKRIRPILAYAAAQAIGLAPERVNAPACAVELIHAYSLIHDDLPAMDDDDLRRGRLTCHK 106
Query: 143 ------------AVEHMATKT----KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
A++ +A +T + +S + + + ++ A G+RG++ G+ M++ ++
Sbjct: 107 AFDEATAILAGDALQTLAFQTLTTAEGLSIEARLAMVDTLARAAGSRGMVGGQAMDLAAE 166
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI-EKLRKYGKCVGLAYQVWDDI 245
G+ + L+ I + G LI A+V G + +I ++L Y KC+GLA+Q+ DDI
Sbjct: 167 GQTLDRVSLESIHIHKTGALIRAAVQMATQALPGLDPEIAQRLDHYAKCLGLAFQIRDDI 226
Query: 246 LD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K+ +ATYP L+G+AGAK A L+ +A++ LA DP APL
Sbjct: 227 LDVEGETAVIGKTQGKDQTQAKATYPALLGLAGAKEAAATLIDDAHESLAALDPQATAPL 286
Query: 298 YHLADFLVSR 307
LAD++V R
Sbjct: 287 RWLADYMVQR 296
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 101/185 (54%), Gaps = 13/185 (7%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
L + AL A + +A+ P R + IG ++ A G+RG+ G+ +++ + G+ + L
Sbjct: 117 LLVGDALQTLAFQVLASAPVTDMPTRQLGMIGLLAMASGSRGMAGGQAIDLAAVGRQLDL 176
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----- 247
EL+F+ + G LI SV+ G G E +E+L +Y K GL +QV DDILD
Sbjct: 177 RELEFMHIHKTGALIRCSVLLGAQAGTVDGETLERLDRYAKLTGLLFQVVDDILDAEADT 236
Query: 248 ---NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLAD 302
K+A D+ TY L+GVA A+R A++++AEA LA +P RA L LA+
Sbjct: 237 ATLGKTAGKDADHDKPTYVSLLGVADARRLAQDMLAEA---LAALEPLGARAGHLAALAN 293
Query: 303 FLVSR 307
++V R
Sbjct: 294 YIVHR 298
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+RV L A+ EL G +++ V+ + A E++
Sbjct: 46 GKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPCMDNDILRRGKPTCHI 105
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L + +L A + +A P + I ++ A G+RG+ G+ ++++S
Sbjct: 106 RYGEPTALLVGDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAAGSRGMAGGQAIDLDS 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDD 244
GK +SL EL+F+ + G LI A+V+ G G ED ++L + KC+GLA+QV DD
Sbjct: 166 VGKTLSLPELEFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLDHFAKCIGLAFQVVDD 225
Query: 245 ILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K+A +++ TY ++G+ A+ A EL EA+ L F P A
Sbjct: 226 ILDAEASTAALGKTAGKDAENNKPTYVSILGIKQARELAHELQREASGVLDKFGP-EALR 284
Query: 297 LYHLADFLVSR 307
L + DF+V R
Sbjct: 285 LQQITDFIVQR 295
>gi|387771846|ref|ZP_10128003.1| polyprenyl synthetase [Haemophilus parahaemolyticus HK385]
gi|386908231|gb|EIJ72929.1| polyprenyl synthetase [Haemophilus parahaemolyticus HK385]
Length = 297
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 112/183 (61%), Gaps = 18/183 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A +++ P + +R I ++ A G +G+ G+ +++ ++ K VSL EL+F
Sbjct: 118 ALQSFAFELIADD-EHLPPLQKIRQIQSLAKAAGAKGMCLGQNLDLLAENKAVSLEELEF 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEE-DIE-KLRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LIEASV+ G + +E+ IE +L++Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALIEASVLMGFNLSDYAEDRRIEMQLQRYAQAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAK---ELVAEANQELAYFDPTRAAPLYHLADFL 304
K AG DE +TYPKL+G+ GA++ A+ ++ +A EL FD T L LA+F+
Sbjct: 237 GKTAGADEQHNKSTYPKLLGLEGAQQKAEGLYQIALDALSELN-FDTT---ALKELANFI 292
Query: 305 VSR 307
+ R
Sbjct: 293 IHR 295
>gi|381197476|ref|ZP_09904816.1| geranyltranstransferase [Acinetobacter lwoffii WJ10621]
Length = 303
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V + L+ I R + G LI A+V+ V + G ++ I K
Sbjct: 154 ATASSKMVCGQVLDLQAEGKRVDQTALENIHRNKTGALISAAVMMAAVTVFDGCDQAIPK 213
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+Y + +GLA+QV DDILD + K AG DE +TYP LMG+ A+ YAK L
Sbjct: 214 LREYAQAIGLAFQVQDDILDIISNTDVLGKTAGKDEQVEKSTYPALMGLEAAQDYAKTLH 273
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSRH 308
+A LAYF AA L ++ FL++R
Sbjct: 274 DQAFAALAYFPTDAAAELNQISQFLLARQ 302
>gi|423389504|ref|ZP_17366730.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
gi|401641595|gb|EJS59312.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
Length = 297
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEETIAKAKDSIS 276
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A +A + + + + ++ A G+RG+ G+ ++++S G ++LSE++
Sbjct: 117 ALQALAFRILAEPASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMET 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILD--------N 248
+ RL+ G LI ASV+ G +D IEKL + +C+GLA+Q+ DD+LD
Sbjct: 177 MHRLKTGALIRASVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTATLG 236
Query: 249 MKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ + D+ TYP L+G+ AK A+ L+ +A+Q L D + L LADF+V R
Sbjct: 237 KPQGSDKAQDKPTYPSLLGLIQAKARAQSLLEDAHQALRAIDAS-TEHLEWLADFIVKR 294
>gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|442555683|ref|YP_007365508.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
N343]
gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|441493130|gb|AGC49824.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
N343]
Length = 300
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 41/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCI+S L + +S++P A EM+ T +L
Sbjct: 48 GKRLRAVLCISSAALFDLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDFRRGKPSCHK 107
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A M+T V + ++ AI EI+ A G+ G++ G+ M+I
Sbjct: 108 AFNEALAILAGDALLTDAFTFMSTLNSIVPSNNILVAIHEIAQAAGSNGMVKGQSMDIEH 167
Query: 186 KG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
G DVS + L I + G L AS G ++ G +E I L+ YG+ +G A+Q+ DD
Sbjct: 168 TGVSDVSFNTLCIIHEYKTGALFRASCTTGAMLAGANESAIYALKCYGEALGAAFQITDD 227
Query: 245 IL----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
IL D++ K D+ TYP L+G+ +K+ A+E + A L F
Sbjct: 228 ILNVTADSITLGKPTRSDQEKGKITYPSLLGLEKSKKLAEEKIHLAISSLDTFTGDEVLF 287
Query: 297 LYHLADFLVSR 307
L +A+ L++R
Sbjct: 288 LKEVANSLLTR 298
>gi|423417897|ref|ZP_17394986.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
gi|401107068|gb|EJQ15025.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
Length = 297
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEETIAKAKDSIS 276
>gi|407933916|ref|YP_006849559.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TYTH-1]
gi|407902497|gb|AFU39328.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TYTH-1]
Length = 259
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 111 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPK 170
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 171 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 230
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A LA+F A L ++ FL++R
Sbjct: 231 DQAFDALAHFGEN-AKELVEISQFLLAR 257
>gi|333901950|ref|YP_004475823.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
gi|333117215|gb|AEF23729.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
Length = 295
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML------------------------VTL 133
G+RV L A+CE +GG + ACA E++ +
Sbjct: 43 GKRVRPLLAYAACEALGGAPAQADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHI 102
Query: 134 ALNRALLCYAVEHMATKTKNV---------SPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + A A + + + +V S + + ++ A G G++ G+ +++
Sbjct: 103 AFDEATAILAGDGLQSLAFDVLANTRHNPHSAEIRLSMFQALAQAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G+ + L+ + R + G LIEA+V G L G ++E + L Y + VGLA+QV D
Sbjct: 163 SVGQQLQQPALEVMHRHKTGALIEAAVRLGALASGRADEQALTALSTYARAVGLAFQVQD 222
Query: 244 DILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K+ +D+ TYP L+G+A AK YA EL +A Q L FD A
Sbjct: 223 DILDVESDTATLGKTQGKDQANDKPTYPALLGMAAAKAYALELRDQALQALQPFDDA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
Length = 303
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 52/297 (17%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCEL 112
+ EY+ + A ++ AL E P P + G+R+ L IA+ E
Sbjct: 7 LSFKEYLAVTADAVSSALTE--QFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAAEA 64
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
GG+ + +P+ACA EM+ T +L ALL
Sbjct: 65 FGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALL 124
Query: 141 CYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
+A + A + VS D L+ + ++S G RG++ G++ +++ + + EL++I
Sbjct: 125 THAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYI 184
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD------NMKKK 252
+ LI S++ G I G + +E LR +G+ +GLA+Q+ DDILD M KK
Sbjct: 185 HLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKK 244
Query: 253 KEAG--DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ ++ TYP +GV + R +EL A + +A ++ L +AD+L+ R
Sbjct: 245 TQSDVEQEKVTYPYFIGVDASLRQVEELTVSAKKVIAEGGIPDSSRLLEIADYLMKR 301
>gi|386041718|ref|YP_005960672.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
gi|343097756|emb|CCC85965.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
Length = 307
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 52/297 (17%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCEL 112
+ EY+ + A ++ AL E P P + G+R+ L IA+ E
Sbjct: 11 LSFKEYLAVTADAVSSALTE--QFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAAEA 68
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
GG+ + +P+ACA EM+ T +L ALL
Sbjct: 69 FGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALL 128
Query: 141 CYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
+A + A + VS D L+ + ++S G RG++ G++ +++ + + EL++I
Sbjct: 129 THAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYI 188
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD------NMKKK 252
+ LI S++ G I G + +E LR +G+ +GLA+Q+ DDILD M KK
Sbjct: 189 HLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKK 248
Query: 253 KEAG--DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ ++ TYP +GV + R +EL A + +A ++ L +AD+L+ R
Sbjct: 249 TQSDVEQEKVTYPYFIGVDASLRQVEELTVSAKKVIAEGGIPDSSRLLEIADYLMKR 305
>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 297
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A + +A + +S + V + ++ A G RG++ G+ M++ ++G + L +L+
Sbjct: 119 ALQTLAFQALA-EAPGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLEN 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDIL----DNMKKK 252
I + G LI SV GVL GG + D E+L Y KC+GLA+Q+ DD+L D +
Sbjct: 178 IHIHKTGALIRVSVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQIG 237
Query: 253 KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG D+ ATYP L+G+A AK A +L+ EA + ++ F RA PL +A+ L+ R
Sbjct: 238 KTAGRDQELNKATYPALVGLAEAKAMANQLINEAIESVSIFG-ERAQPLVWIANALLGR 295
>gi|381402160|ref|ZP_09927038.1| geranyltranstransferase [Kingella kingae PYKK081]
gi|380832848|gb|EIC12738.1| geranyltranstransferase [Kingella kingae PYKK081]
Length = 295
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
L + AL A + ++T+T+ +S R +R + ++ A G+ G+ G+ +++ + G+D+S
Sbjct: 112 LLVGDALQTLAFDILSTETE-LSTARQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQ 170
Query: 193 SELDFIKRLRCGKLIEASVVCGVL-IGGGSEEDIEKLRKYGKCVGLAYQVWDDILD---- 247
+EL+F+ L+ G LI A+V G L ++E + L Y +GLA+QV DD+LD
Sbjct: 171 TELEFMHSLKTGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEAD 230
Query: 248 ----NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
K+A ++ TY KLMG+ A+ YA++LVA+A L FD TRA L LA F
Sbjct: 231 TATLGKTAGKDADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFD-TRADHLRTLAQF 289
Query: 304 LVSR 307
+V+R
Sbjct: 290 VVAR 293
>gi|347755955|ref|YP_004863519.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588473|gb|AEP13003.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 292
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 44/251 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E+ GG + P+ACA EM+ T +L
Sbjct: 43 GKRLRPILVLAAGEVFGGAPERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGT-RGVLAGRIMEIN 184
L+ +A +A + ++ VR I E++ GT G++AG+I+++
Sbjct: 103 QFDEATAILAGDGLMTHAFRILAEM--DAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLE 160
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK + L FI R + G LI ++VCG ++ +E D+ L YG VGLA+Q+ DD
Sbjct: 161 AEGKPIDAGRLAFIHRAKTGALIRGALVCGGIVADAAESDLALLSAYGDRVGLAFQIADD 220
Query: 245 ILDNMKKK--------KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K+A +ATYP L G+ +++ A+ L EA + LA RA
Sbjct: 221 ILDETATAEQLGKTPGKDAAAGKATYPALYGLEASRKQAEALAEEAIEVLAPLG-QRAQL 279
Query: 297 LYHLADFLVSR 307
L +A F+V+R
Sbjct: 280 LIEMARFVVNR 290
>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 296
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A +A T + + + ++ A G+RG+ G+ ++++S G ++LSE++
Sbjct: 117 ALQALAFRTLAEPTSAIPAKNQINMLELLAEAAGSRGMAGGQAIDLDSVGVQLTLSEMET 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILD--------N 248
+ RL+ G LI ASV+ G +D +E L ++ +C+GLA+Q+ DD+LD
Sbjct: 177 MHRLKTGALIRASVLLGAWCHPEITQDTLENLDRFAQCIGLAFQIQDDVLDVESDTATLG 236
Query: 249 MKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH---LADFLV 305
+ + D+ TYP L+G+ AK A+ L+ +A Q L D AP H LADF+V
Sbjct: 237 KPQGSDKAQDKPTYPSLLGLTQAKARAQSLLEDARQTLRAID----APTEHLEWLADFIV 292
Query: 306 SR 307
R
Sbjct: 293 KR 294
>gi|407979670|ref|ZP_11160480.1| geranyltranstransferase [Bacillus sp. HYC-10]
gi|407413682|gb|EKF35371.1| geranyltranstransferase [Bacillus sp. HYC-10]
Length = 296
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 47/291 (16%)
Query: 63 IDEYMTLKAKKINKALF---EGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNE 117
+ E++T + + I LF + +P L+ L + + G+R+ L +A G E
Sbjct: 5 LTEFLTTRKQVIEDYLFTYVQELTIPEDLKASMLYSLKAGGKRLRPVLVLALLNAYGKRE 64
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
+P+ CA EM+ T +L ALL +
Sbjct: 65 EDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFR 124
Query: 146 HMATKTKNVSP-DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCG 204
+ ++ + P ++ ++ I E+ + G G++ G+ ++ ++ K + LSEL+ I + G
Sbjct: 125 LITSQLSDRVPAEQKLKIIDELVKSAGALGMVGGQFDDMEAEQKQIPLSELESIHARKTG 184
Query: 205 KLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA 260
KL+ SV G ++ G S +DIEKLR++ +G+A+Q+ DDILD K K G D A
Sbjct: 185 KLLTFSVAAGAMLAGASNDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTA 244
Query: 261 ----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYP L+ ++GAK E + A + ++ D + L+ L D + SR
Sbjct: 245 NEKSTYPSLLTLSGAKEKLDEHITRAKEIVSNLDLEQHL-LHDLCDLIASR 294
>gi|406911096|gb|EKD50966.1| Polyprenyl synthetase [uncultured bacterium]
Length = 297
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 41/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L AS + + E V+PLA A EM+ +L
Sbjct: 47 GKRIRPVLVFASTQTLNMPEEDVIPLAGALEMIHAFSLIHDDLPSMDNDDLRRGRPTNHK 106
Query: 136 ----------NRALLCYAVEHMAT-KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL +A ++ T+ + ++ I + A GT G+++G++ ++
Sbjct: 107 VFGEALAILAGDALLSHAFTVLSDLDTEKYPHENIIDVIHHFAKATGTCGMISGQVWDMQ 166
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ + +SL EL + R + G LI +V ++ G + ++ L +Y + +GL +QV DD
Sbjct: 167 SENRIISLDELQNLHRHKTGALITLAVTSPAVLKGAEPDVMDCLIRYSEAIGLCFQVVDD 226
Query: 245 ILD---NMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
ILD + K G D+A TYP L+G+ GAK+ AK L+ A L FD RA PL
Sbjct: 227 ILDIEGDESLGKPIGSDQAKNKSTYPALLGLDGAKKEAKRLLEVALASLTSFD-ERADPL 285
Query: 298 YHLADFLVSR 307
+A F+ R
Sbjct: 286 RAIARFIAER 295
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 41/216 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + +G + + +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL YA + +A V P ++ I +++ A G G++AG+ ++
Sbjct: 106 VFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++L+EL++I R + GK+++ SV G L+GG +L ++ +GLA+Q+ DD
Sbjct: 166 AEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDD 225
Query: 245 ILD--NMKKK--KEAGDD----EATYPKLMGVAGAK 272
ILD M++K K G D +ATYP L+ + GAK
Sbjct: 226 ILDIEGMEEKIGKRVGSDRDNKKATYPALLSLGGAK 261
>gi|375009473|ref|YP_004983106.1| geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288322|gb|AEV20006.1| Geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 41/216 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + +G + + +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL YA + +A V P ++ I +++ A G G++AG+ ++
Sbjct: 106 VFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++L+EL++I R + GK+++ SV G L+GG +L ++ +GLA+Q+ DD
Sbjct: 166 AEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDD 225
Query: 245 ILD--NMKKK--KEAGDD----EATYPKLMGVAGAK 272
ILD M++K K G D +ATYP L+ + GAK
Sbjct: 226 ILDIEGMEEKIGKRVGSDRDNKKATYPALLSLGGAK 261
>gi|451948109|ref|YP_007468704.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
gi|451907457|gb|AGF79051.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
Length = 298
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 45/254 (17%)
Query: 98 GERVHGTLCIASCELVGGN---ESSVMPLACAAEMLVTLAL------------------- 135
G+RV LCIA+ VGGN + +++P+ACA E + T +L
Sbjct: 44 GKRVRPILCIAAARAVGGNTIDDQNILPVACALECIHTYSLIHDDLPAMDNDALRRGKAT 103
Query: 136 -------------NRALLCYAVEHMATKTK-NVSPDRLVRAIGEISSAVGTRGVLAGRIM 181
LL +A + + + N+ ++ + I+ A G+ G++ G+ +
Sbjct: 104 NHVLYGEAGAILAGDGLLTWAFDLLCNPSHGNLDSEKKLAISHCIAHAAGSFGMVGGQAL 163
Query: 182 EINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
+I S+ L I R + G LI ASVV G + G E E L++YG +GLA+Q+
Sbjct: 164 DIASENTRFPFETLQTIHRSKTGALITASVVSGAIAAGADREQSEALKQYGHQIGLAFQI 223
Query: 242 WDDILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR 293
DD+L+ K AG D +ATYP G+ ++ A + +A L FD +
Sbjct: 224 VDDLLNATATTEQLGKAAGSDIELGKATYPAYFGIEETRKRALNAIEKAKTCLKDFDD-K 282
Query: 294 AAPLYHLADFLVSR 307
A PL LAD++ +R
Sbjct: 283 AQPLRLLADYIYTR 296
>gi|418293779|ref|ZP_12905681.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065164|gb|EHY77907.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 295
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+++S ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E MA + N L +R ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV D
Sbjct: 163 SVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADNLASLSQYARTIGLAFQVQD 222
Query: 244 DILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K + D D+ TYP L+G+ AK YA EL +A L FD T A
Sbjct: 223 DILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFD-TAAE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGLGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEETIAEA 270
>gi|333376484|ref|ZP_08468260.1| geranyltranstransferase [Kingella kingae ATCC 23330]
gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
L + AL A + ++T+T+ +S R +R + ++ A G+ G+ G+ +++ + G+D+S
Sbjct: 112 LLVGDALQTLAFDILSTETE-LSTVRQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQ 170
Query: 193 SELDFIKRLRCGKLIEASVVCGVL-IGGGSEEDIEKLRKYGKCVGLAYQVWDDILD---- 247
+EL+F+ L+ G LI A+V G L ++E + L Y +GLA+QV DD+LD
Sbjct: 171 TELEFMHSLKTGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEAD 230
Query: 248 ----NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADF 303
K+A ++ TY KLMG+ A+ YA++LVA+A L FD TRA L LA F
Sbjct: 231 TATLGKTAGKDADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFD-TRADHLRTLAQF 289
Query: 304 LVSR 307
+V+R
Sbjct: 290 VVAR 293
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423630903|ref|ZP_17606650.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401264270|gb|EJR70382.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
Length = 296
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ +++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMD 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEETIAEA 270
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 60/296 (20%)
Query: 66 YMTLKAKKINKALFEGAAVPLILQYPTLPNHE---------GERVHGTLCIASCELVGGN 116
Y+T + +++ +AL + +P Q+PT HE G+R+ L +A+CE VGG+
Sbjct: 6 YLTSQRQRVEEALAQ--TLPPKQQHPT-QLHEAMHYSVFAGGKRLRPILMMAACEAVGGD 62
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
+V+P ACA EM+ T +L ALL A
Sbjct: 63 IENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTEAF 122
Query: 145 EHMATKTKNVS-PDRLVRAIGEI-SSAVGTRGVLAGRIMEINSKGKDV-SLSELDFIKRL 201
++ + +V DR R + ++ + A G G++ G+I+++ ++G + L+ +D+I
Sbjct: 123 VVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATVDYIHAH 182
Query: 202 RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDD--- 258
+ G LI AS+ G L+GG + E E L ++GK GLA+Q+ DDILD +++ G D
Sbjct: 183 KTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQEQLGKDIGS 242
Query: 259 -----EATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TRAAPLYHLADFLVSR 307
+ATYP ++G++ + R A EL Q L +P A PL ++ ++++R
Sbjct: 243 DQERGKATYPAVLGLSESIRRATEL---HQQALKALEPLADAAEPLRQISHYIINR 295
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKEILEETIAEA 270
>gi|406037339|ref|ZP_11044703.1| geranyltranstransferase [Acinetobacter parvus DSM 16617 = CIP
108168]
Length = 303
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V +EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEGKQVDQAELENIHRNKTGALIQAAIMMGAVTIFAGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YA+ L
Sbjct: 215 LRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEKAQAYAQTLH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + L YF A L +A FL++R
Sbjct: 275 DQAFEALGYFGDD-AKELVAIAQFLLAR 301
>gi|423612401|ref|ZP_17588262.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
gi|401245990|gb|EJR52342.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
Length = 297
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEPKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEETIAKA 271
>gi|10801562|dbj|BAB16694.1| GGPP synthase 2 [Nicotiana tabacum]
Length = 127
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
+LL +A E++AT T VSP R++ AIGE++ ++GT G++AG++ +I G +V L L+
Sbjct: 26 SLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+EASVV G ++GGG++E++EKLR + +C+GL
Sbjct: 86 FIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGL 126
>gi|423452515|ref|ZP_17429368.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|423470398|ref|ZP_17447142.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
gi|401140153|gb|EJQ47710.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|402436527|gb|EJV68557.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
Length = 297
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEETIAKAKDSIS 276
>gi|406835647|ref|ZP_11095241.1| polyprenyl synthetase [Schlesneria paludicola DSM 18645]
Length = 312
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 60/266 (22%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +CE GG+ + +P ACA EM+ T +L
Sbjct: 49 GKRLRPILVLLACEACGGDSDAALPAACAIEMIHTYSLIHDDLPAMDDDDYRRGRLTNHK 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAI-GEISSAVGTRGVLAGRIMEI- 183
ALL A E MA +++ P + A +++SA G G++ G++ ++
Sbjct: 109 VYGEAMAILAGDALLTLAFEVMA---RDIQPGGVAAACCADLASAAGWCGMVGGQVADLE 165
Query: 184 --------------NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLR 229
++ G+ L++L+ I R + G+L+ ++V G + E + +L
Sbjct: 166 AEQQSADRQLGSATDNSGESAGLAQLEAIHRRKTGRLLMSAVTLGARVAQAKPELVNRLE 225
Query: 230 KYGKCVGLAYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAE 281
++GK VGLA+Q+ DD+L D K K G D + TYP L+G+ G++R A +L+ E
Sbjct: 226 EFGKRVGLAFQIADDLLDVTGDATKLGKNVGKDATLGKMTYPGLLGIDGSRRKADDLIDE 285
Query: 282 ANQELAYFDPTRAAPLYHLADFLVSR 307
A + L RAAPL LA F+ R
Sbjct: 286 ACRLLEPLGE-RAAPLMELARFVTRR 310
>gi|452746756|ref|ZP_21946566.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
gi|452009233|gb|EME01456.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
Length = 296
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+++S ACA E++ +L
Sbjct: 44 GKRVRPLLVYAACEALNGDKASADGGACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E MA N L +R ++ A G G++ G+ +++
Sbjct: 104 AFDEACAILAGDGLQSLAFEAMAQAEHNPQDATLRLRMFAVLARAAGPAGMVGGQAIDLG 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV D
Sbjct: 164 SVGLKLDRNALELMHRHKTGALIEASVQLGALASGHADADNLASLSQYARAIGLAFQVQD 223
Query: 244 DILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K + D D+ TYP L+G+ AK YA EL +A L FD T A
Sbjct: 224 DILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFD-TAAE 282
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 283 PLRELARYIVER 294
>gi|13383253|dbj|BAB39477.1| putative GGPP synthase 2 [Youngia japonica]
Length = 127
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
+L +A +H+A+ T SP R++ A+GE++ ++GT G++AG++++I S G KDV L +L+
Sbjct: 26 SLFAFAFQHIASATVGASPARVLAAVGELAKSIGTEGLVAGQVVDIASTGVKDVGLEQLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+EA+VV G ++GGGS+ +E+LR + +C+GL
Sbjct: 86 FIHIHKTAALLEAAVVLGAILGGGSDTQVEELRTFARCIGL 126
>gi|365842258|ref|ZP_09383287.1| putative geranyltranstransferase [Flavonifractor plautii ATCC
29863]
gi|364576099|gb|EHM53446.1| putative geranyltranstransferase [Flavonifractor plautii ATCC
29863]
Length = 293
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 43/262 (16%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+R+ L + +C L GG +P A A EM+ T +L
Sbjct: 35 MRYSLLAG--GKRLRPVLLLEACRLCGGAVEDALPFAGAIEMVHTYSLIHDDLPCMDDDD 92
Query: 136 --------------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
LL A E M + + P+R++ A G ++ A G RG+
Sbjct: 93 LRRGRPTNHKVFGEANAVLAGDGLLTAAFETMLAPGQKLPPERVLAAAGILARAAGGRGM 152
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCV 235
+ G+++++ +G+ + L+E++ ++RL+ G LI A+V G + GG+EE E L +Y C+
Sbjct: 153 VGGQVLDMAGEGRALGLTEVEELQRLKTGALIRAAVEMGCAVAGGAEEQREALCRYADCL 212
Query: 236 GLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
GLA+Q+ DDILD + + G D+ T+ L G+A + EL A + LA
Sbjct: 213 GLAFQIQDDILDVVGDEATLGKPIGSDVRSDKTTFVALKGLADCRILVAELTDRAVEALA 272
Query: 288 YFDPTRAAPLYHLADFLVSRHK 309
F + A L LA L R K
Sbjct: 273 PFG-SEAESLRGLAQSLAGREK 293
>gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
Length = 303
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V + L+ I R + G LI A+V+ V + G ++ I K
Sbjct: 154 ATASSKMVCGQVLDLQAEGKRVDQTALENIHRNKTGALISAAVMMAAVTVFDGCDQAIPK 213
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+Y + +GLA+QV DDILD + K AG DE +TYP LMG+ A+ YAK L
Sbjct: 214 LREYAQAIGLAFQVQDDILDIISNTDVLGKTAGKDEQVEKSTYPALMGLESAQDYAKTLH 273
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSRH 308
+A LAYF AA L ++ FL++R
Sbjct: 274 DQAFAALAYFPMDAAAELNQISQFLLARQ 302
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 41/227 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEAN 283
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLFNEKSTYTTLFTVDRAKDILEETIAEAK 271
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 119/231 (51%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMAT-KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + + T + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMTYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEETIAKAKDSIS 276
>gi|585326|sp|Q08291.1|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 41/242 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +++ +G + + +P+ACA EM+ T +L
Sbjct: 46 GKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + + + + P +R I ++ A G G++AG+ ++
Sbjct: 106 VFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK ++LSEL++I R + GK+++ SV G LIGG +L ++ +GLA+Q+ DD
Sbjct: 166 GEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDD 225
Query: 245 ILD----NMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K K G D+ ATYP L+ +AGAK + A + L D AA
Sbjct: 226 ILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLAFHIEAAQRHLRNADVDGAAL 285
Query: 297 LY 298
Y
Sbjct: 286 AY 287
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|365159033|ref|ZP_09355220.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188250|ref|YP_005574146.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564407|ref|YP_006607131.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|410676567|ref|YP_006928938.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|423358781|ref|ZP_17336284.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|423385682|ref|ZP_17362938.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|423412017|ref|ZP_17389137.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|423426314|ref|ZP_17403345.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|423432198|ref|ZP_17409202.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|423437632|ref|ZP_17414613.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|423503133|ref|ZP_17479725.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|423527962|ref|ZP_17504407.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|423561345|ref|ZP_17537621.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|434377303|ref|YP_006611947.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|449091138|ref|YP_007423579.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200639|ref|YP_007480720.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|363626022|gb|EHL77031.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084653|gb|EJP92899.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|401104085|gb|EJQ12062.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|401111061|gb|EJQ18960.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|401116954|gb|EJQ24792.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|401120787|gb|EJQ28583.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|401201602|gb|EJR08467.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|401635738|gb|EJS53493.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|401793059|gb|AFQ19098.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|401875860|gb|AFQ28027.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|402451625|gb|EJV83444.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|402459354|gb|EJV91091.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|409175696|gb|AFV20001.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|449024895|gb|AGE80058.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452106032|gb|AGG02972.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 296
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEETIAEA 270
>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 57/297 (19%)
Query: 63 IDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPN---HEGERVHGTLCIASCELVGGN 116
I Y ++N AL F+ A L Y + + G+RV L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFQAPAPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 117 ESSVMPLACAAEMLVTLAL-------------------------------------NRAL 139
ACA E++ +L + A
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
H+ ++ ++ + +++A G G++ G+ +++ S G + + L+++
Sbjct: 122 TALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH 177
Query: 200 RLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWDDILD------NMKKK 252
R + G LIEASV G L G +++ ++ L+ Y + +GLA+QV DDILD + K+
Sbjct: 178 RHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKR 237
Query: 253 KEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ A D+ TYP L+G+ AK YA EL +A Q L+ FD T A PL LA ++V R
Sbjct: 238 QGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-TAAEPLRQLARYIVER 293
>gi|386714769|ref|YP_006181092.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
gi|384074325|emb|CCG45818.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
Length = 294
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 51/292 (17%)
Query: 63 IDEYMTLKAKKINKALF---EGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNE 117
+ +Y+ K + IN+ L VP LQ L + E G+R+ L IA+ E G
Sbjct: 5 LSDYLLEKRQLINEQLIHYVRDYTVPGRLQDAMLYSIEAGGKRLRPILLIATAEAFGAKV 64
Query: 118 SSVMPLACAAEMLVTLAL--------------------------------NRALLCYAVE 145
M +AC EM+ T +L ALL + E
Sbjct: 65 DKTMAVACGLEMIHTYSLIHDDLPAMDNDDFRRGLPTSHRRFDEATAILAGDALLTLSSE 124
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGK 205
+ + +R V I E+S A G G++ G++ ++ S+ K + L EL+ I + + GK
Sbjct: 125 IIVNDQELNDRER-VFLIQELSRASGASGMVEGQMQDMLSEDKQIPLEELENIHKKKTGK 183
Query: 206 LIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM----KKKKEAGDDE-- 259
L+ +++ G +G S+E ++++K G+ +GL +Q+ DDILD K K G DE
Sbjct: 184 LLNFAIIAGAFLGNASDEKFDEMKKMGEALGLIFQIQDDILDVTGDAEKIGKPVGSDEGN 243
Query: 260 --ATYPKLMGVAGAKRYAKELVAEANQEL--AYFDPTRAAPLYHLADFLVSR 307
+TYP+L+G+ GA+ + V EA L A + T + L H +L SR
Sbjct: 244 RKSTYPQLLGLDGARTQMESYVDEAQSALKNAGVNHTLLSELIH---YLSSR 292
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKAGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEETIAEA 270
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|375286185|ref|YP_005106624.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|402555688|ref|YP_006596959.1| geranyltranstransferase [Bacillus cereus FRI-35]
gi|423354675|ref|ZP_17332300.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|423374004|ref|ZP_17351343.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|423566860|ref|ZP_17543107.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|358354712|dbj|BAL19884.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|401086223|gb|EJP94450.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|401094819|gb|EJQ02889.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|401215375|gb|EJR22092.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|401796898|gb|AFQ10757.1| geranyltranstransferase [Bacillus cereus FRI-35]
Length = 296
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|423585339|ref|ZP_17561426.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|401233982|gb|EJR40468.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
Length = 296
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKAILEETIAEA 270
>gi|390952210|ref|YP_006415969.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
gi|390428779|gb|AFL75844.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
Length = 297
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 143/294 (48%), Gaps = 53/294 (18%)
Query: 63 IDEYMTLKAKKINKALFE---GAAVPLI-----LQYPTLPNHEGERVHGTLCIASCELVG 114
+D Y T +++ +AL E A+VP + ++Y L G+R+ L A+ E +G
Sbjct: 6 LDTYRTQCQERLERALDELLPRASVPPLRLHEAMRYSVLGG--GKRIRPLLTYATGEALG 63
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
+ + + ACA E + +L AL
Sbjct: 64 IDSALLDRPACAVEFIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDDATAILAGDALQTL 123
Query: 143 AVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLR 202
A + +A T + R+ + ++ A G+RG++ G+ ++++++GK + ++ L+ I +
Sbjct: 124 AFQSLAEATGLDARIRIA-MVEHLARASGSRGMVGGQALDLDAEGKALDVAMLEHIHIHK 182
Query: 203 CGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGD 257
G LI ASV G+L G + D E+L +Y KC+GLA+Q+ DD+L D + K AG
Sbjct: 183 TGALIRASVQMGILAHGALDADRAERLDRYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGR 242
Query: 258 DE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D+ ATYP L+G+A AK A +L+AEA + F P A PL +A L+ R
Sbjct: 243 DQALDKATYPALVGLAEAKEMAADLIAEALTAIEIF-PDGADPLRWIASALLGR 295
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|423640739|ref|ZP_17616357.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|423650045|ref|ZP_17625615.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|423657123|ref|ZP_17632422.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|401279800|gb|EJR85722.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|401282463|gb|EJR88362.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|401289866|gb|EJR95570.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
Length = 296
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEETIAEA 270
>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 301
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ + + ++ GG +P+ACA EM+ + +L
Sbjct: 49 GKRLRPIMVLEGAKIAGGEAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHR 108
Query: 136 ----------NRALLCYAVEHMATK--TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A E ++ K + PD +R I EI+ A G+RG++ G+I+++
Sbjct: 109 VFGEANAVLTGDALLTAAFELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDL 168
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++GK + L + L+ G+L A++ G ++GG E+ + L Y GLA+Q+ D
Sbjct: 169 EAEGKIIDYESLRKLHCLKTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISD 228
Query: 244 DILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K G D + TYP L+G+ +++ +E +A Q L F P A
Sbjct: 229 DILDVQGDAALTGKSMGSDARKEKNTYPSLLGLEKSRQLLEESIATCLQSLELFGP-EAE 287
Query: 296 PLYHLADFLVSR 307
L LA + + R
Sbjct: 288 FLRQLACYTLYR 299
>gi|421626909|ref|ZP_16067733.1| polyprenyl synthetase [Acinetobacter baumannii OIFC098]
gi|408694412|gb|EKL39983.1| polyprenyl synthetase [Acinetobacter baumannii OIFC098]
Length = 303
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++ K +S EL+ I R + G LI+A+++ G V I +++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPDTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YAKEL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LA+F A L ++ FL++R
Sbjct: 275 DQAFEALAHFGEN-AKELVEISQFLLAR 301
>gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
Length = 297
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 48/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML------------------------VTL 133
G+RV LC A+ E +G + V A A E++ +
Sbjct: 44 GKRVRPLLCYATAEALGQSAEQVDGAAAALELIHAYSLVHDDLPAMDDDDLRRGQATCHI 103
Query: 134 ALNRALLCYAVEHMATKTKNV---------SPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + A A + + T ++ P R +RA+ ++SA G G++ G+ ++I
Sbjct: 104 AFDEATAILAGDALQTLAFDILASDQALTDDPARRLRAVKVLASASGVDGMVGGQAIDIA 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE--EDIEKLRKYGKCVGLAYQVW 242
++G+ ++L +L + L+ G LI ASV + G +E + ++L +Y +C+GLA+Q+
Sbjct: 164 AEGQQLTLDQLKRMHALKTGALIRASVQISAALAGEAENGDTYQRLSRYAECIGLAFQIR 223
Query: 243 DDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDP--T 292
DDILD + K G DEA TY L+G+ GAK++A + AEA +A +P
Sbjct: 224 DDILDVISDTQTLGKTQGADEAHNKPTYTSLLGLEGAKQHAIDTHAEA---IACLEPFGE 280
Query: 293 RAAPLYHLADFLVSR 307
RA L ++AD++V R
Sbjct: 281 RAQLLKNIADYIVER 295
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423582390|ref|ZP_17558501.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|423634993|ref|ZP_17610646.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401213269|gb|EJR20010.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|401278979|gb|EJR84909.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
Length = 296
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L + AK +E +AEA
Sbjct: 225 ILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTIDRAKDILEETIAEA 270
>gi|319938731|ref|ZP_08013095.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
gi|319811781|gb|EFW08047.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
Length = 300
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 88/144 (61%), Gaps = 15/144 (10%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V I E+S A GT G++ G+++++ +GKD+SL+EL I + GKL+ + LI
Sbjct: 132 VNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQNIHANKTGKLLTYPFIAAGLIAE 191
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILD---NMKK-----KKEAGDDEATYPKLMGVAGA 271
++ EKLRK G+ +GLA+QV DDILD N ++ +K+ ++ATYP ++G+ GA
Sbjct: 192 VAQPQQEKLRKIGQLLGLAFQVRDDILDITANFEELGKTPQKDVAAEKATYPAILGLNGA 251
Query: 272 KRYAKE-------LVAEANQELAY 288
KR+ +E L+AE ELA+
Sbjct: 252 KRFFEEQLEETEHLLAEVEAELAF 275
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 45/254 (17%)
Query: 98 GERVHGTLCIASCELVGGNESS---VMPLACAAEMLVTLAL------------------- 135
G+R+ LC+A+ + + E + ++P+ACA E + T +L
Sbjct: 44 GKRIRPILCLAAADSICAQERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKAT 103
Query: 136 -------------NRALLCYAVEHMATKTK-NVSPDRLVRAIGEISSAVGTRGVLAGRIM 181
LL +A + +A + K N++ ++ + ++ A G+ G++ G+ +
Sbjct: 104 NHVLYGEAGAILAGDGLLSWAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQL 163
Query: 182 EINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
+I S+ K++ L I R + G LI S++ G + G + + + L +YG +GLA+Q+
Sbjct: 164 DIQSENKEIDFDTLATIHRSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQI 223
Query: 242 WDDILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR 293
DD+LD +E AG D +ATYP G+ + AK V A + L FD R
Sbjct: 224 IDDLLDATATTEELGKTAGSDAEHGKATYPLFFGIDKTREKAKAAVDNAIKALTLFDH-R 282
Query: 294 AAPLYHLADFLVSR 307
A PL LA+++ SR
Sbjct: 283 ADPLRGLANYIYSR 296
>gi|15233848|ref|NP_195558.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|85680919|sp|Q39108.2|GGR_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 50/238 (21%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
+ Y T +IN+ L E A+P+ ++Y L +R +C+A+CEL
Sbjct: 45 FDLRTYWTTLITEINQKLDE--AIPVKHPAGIYEAMRYSVL-AQGAKRAPPVMCVAACEL 101
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
GG+ + P ACA EM+ +L AL
Sbjct: 102 FGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALF 161
Query: 141 CYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
A +H+ + T V ++R I EI+ VG+ G+ AG+ +++ +G LS F+
Sbjct: 162 PLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FV 216
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+ + G + E S VCG L+GG +E++++ LR+YG+ VG+ YQV DDI ++ KK + G
Sbjct: 217 QEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGG 274
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL YA + +A K +S D VR I E++ A G G++ G++ ++ +GK +SL +L++
Sbjct: 113 ALLTYAFQVVADD-KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEY 171
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I R + GKL++ S+ G ++G +E+ + L + +GLA+Q+ DDILD +++ G
Sbjct: 172 IHRHKTGKLLQYSIRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGK 231
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQEL 286
+D++TYP L+ + GAK+ + + EA + L
Sbjct: 232 KVGSDIENDKSTYPSLLTLDGAKKKLYDHMKEARKLL 268
>gi|406980661|gb|EKE02234.1| Polyprenyl synthetase [uncultured bacterium]
Length = 302
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 52/284 (18%)
Query: 44 QAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHG 103
Q NL N +++Y+ ++ +I ++E ++Y TL + G+R+
Sbjct: 7 QDSNLVEALQENKKLINTYLEKYLEIRYPQI---IWES------MRYTTLSD--GKRIRP 55
Query: 104 TLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------------- 135
L + S GGN +V+P ACA EM+ +L
Sbjct: 56 VLALESARACGGNIENVIPTACAIEMIHAQSLIHDDLPCMDNDDYRRGRLTNHKVYGEAF 115
Query: 136 ----NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV 190
ALL YA + + T V D L + + E++ A G G++ G++++I+S+ K++
Sbjct: 116 AVLAGDALLSYAPQIIIQHTPAYVDRDLLFQVLEELAIAAGALGLIGGQVIDIDSENKEI 175
Query: 191 SLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMK 250
+ ++I + G+L + ++ G L+ ++E +E L +YG+ VG A+Q+ DDILD
Sbjct: 176 DIPTFNYIHTHKTGELFKFAMRSGALLSQATDEQLEILTEYGRLVGYAFQIADDILDITG 235
Query: 251 KK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQEL 286
K K G D+ T+P L G++ +K ++L ++A Q L
Sbjct: 236 TKESLGKTPGKDKLAKKNTHPSLFGLSQSKEEVEQLCSKAQQIL 279
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| Polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 298
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 54/298 (18%)
Query: 62 QIDEYMTLKAKKINKAL--FEGAAVPLI----LQYPTLPNHEGERVHGTLCIASCELVGG 115
++ EY+ +KI+K L G P + ++Y G+R+ LC+ S EL+ G
Sbjct: 5 RLTEYLKYAQEKIDKHLDSLLGKNSPDVIYEAMRYSVFAG--GKRLRPILCLLSYELLSG 62
Query: 116 NESS--VMPLACAAEMLVTLAL-------------------NRALLCYAVEHMATKT--- 151
E+ V+ +ACA E++ T +L N + A+ +A
Sbjct: 63 KEADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLN 122
Query: 152 -----------KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKR 200
+N + + ++A + A GT G++ G+++++ + GK+++ L +
Sbjct: 123 KAAEVCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENLLYEMH 182
Query: 201 LR-CGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--- 256
L+ KLI+AS VCG + G EE I +YGK +GLA+Q+ DDILD + K+ G
Sbjct: 183 LKKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSI 242
Query: 257 -----DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
+ + T+ G+ A+ Y + +A + + +D R L ++L++R K
Sbjct: 243 GKDIKEKKNTFVTFYGIEKAQNYVESFSKKAIEIVEKYD--RMGLFIELTNYLITREK 298
>gi|392419665|ref|YP_006456269.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
gi|390981853|gb|AFM31846.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
Length = 295
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 115/252 (45%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+++S ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALNGDKTSADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E MA N L +R ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV D
Sbjct: 163 SVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADNLASLSQYARAIGLAFQVQD 222
Query: 244 DILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K + D D+ TYP L+G+ AK YA EL +A L FD + A
Sbjct: 223 DILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDIS-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|333979347|ref|YP_004517292.1| polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822828|gb|AEG15491.1| Polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 296
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E VGG+ + V+P ACA E++ T +L
Sbjct: 44 GKRLRPVLALAAAETVGGDPARVLPAACALELIHTYSLIHDDLPAMDNDDFRRGKPTCHR 103
Query: 136 ----------NRALLCYAVEHMATKTKN-VSP-DRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A +A +N ++P +R+V+ I E+++A GT G++ G++++
Sbjct: 104 VYGEAVAILAGDALLTHAFALLAKNAQNQLAPAERVVQVIEEVAAAAGTLGLIGGQVVDT 163
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ V + L++I R + G L +V G ++ G E+ +E L Y + +GLA+Q+ D
Sbjct: 164 LAADTAVDAATLEYIHRHKTGALYRVAVRAGAILAGAKEKQLEALTIYAENLGLAFQIQD 223
Query: 244 DIL----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D + K G DE ATYP L G+ A+ A E VA A L FD RA
Sbjct: 224 DILDVEGDPARLGKPVGSDERNKKATYPALFGLDVARAKAGEAVAAALAALEPFD-ERAD 282
Query: 296 PLYHLADFLVSR 307
L L F+++R
Sbjct: 283 FLRELVRFVITR 294
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|423368233|ref|ZP_17345665.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|423512293|ref|ZP_17488824.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
gi|423518883|ref|ZP_17495364.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|423591823|ref|ZP_17567854.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|423660971|ref|ZP_17636140.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|423669765|ref|ZP_17644794.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|401080984|gb|EJP89264.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|401159938|gb|EJQ67317.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|401231956|gb|EJR38458.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|401298892|gb|EJS04492.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|401301012|gb|EJS06601.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|402449264|gb|EJV81101.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
Length = 297
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEKIAKAKDSIS 276
>gi|423558242|ref|ZP_17534544.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
gi|401191510|gb|EJQ98532.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
Length = 297
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGQPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEKIAKAKDSIS 276
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|423574135|ref|ZP_17550254.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|423604168|ref|ZP_17580061.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|401212704|gb|EJR19447.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|401245854|gb|EJR52207.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
Length = 296
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEKIAKAKDSIS 276
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 50/238 (21%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
+ Y T +IN+ L E A+P+ ++Y L +R +C+A+CEL
Sbjct: 45 FDLRTYWTTLITEINQKLDE--AIPVKHPAGIYEAMRYSVL-AQGAKRAPPVMCVAACEL 101
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
GG+ + P ACA EM+ +L AL
Sbjct: 102 FGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALF 161
Query: 141 CYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
A +H+ + T V ++R I EI+ VG+ G+ AG+ +++ +G LS F+
Sbjct: 162 PLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FV 216
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+ + G + E S VCG L+GG +E++++ LR+YG+ VG+ YQV DDI ++ KK + G
Sbjct: 217 QEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGG 274
>gi|403053079|ref|ZP_10907563.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter bereziniae LMG 1003]
Length = 303
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V L+ I R + G LI+A+++ V I G+++ I +
Sbjct: 155 ATASSKMVCGQVLDLQAEGKHVDQEHLENIHRNKTGALIQAAIMMAAVTIFSGTDQAIPQ 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD + K AG DE +TYP LMG+ A+ YA++L
Sbjct: 215 LRQYGQAIGLAFQVQDDILDVISDTESLGKTAGKDEQVDKSTYPALMGLENAQIYAQQLH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LAYF A L ++ FL++R
Sbjct: 275 DQAFKALAYFGED-AKELNQISQFLLAR 301
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|352684487|ref|YP_004896472.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|350279142|gb|AEQ22332.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
Length = 292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VGG + +PLA A EM+ T +L
Sbjct: 43 GKRLRPILLMAAADAVGGKGTDFLPLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL A E M T+ K V P +V I I+ G G++ G+ ++IN+
Sbjct: 103 VFGQAMAVLAGDGLLTQAFEVM-TEQKGVDPALMVEIIHLIARCAGPEGMVGGQALDINA 161
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ K + +E+ + + G L A++ G L+GGGS++++ L K+ GLA+Q+ DDI
Sbjct: 162 EEKHLEPAEMKQLHEAKTGALFIAAIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDI 221
Query: 246 L----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
L D+ K AG DE +TY L + GAK A + + +A L F RA PL
Sbjct: 222 LDVEGDSKIMGKMAGMDEKMHKSTYVSLFTLEGAKAMALDTLKKAELTLEPFGE-RAEPL 280
Query: 298 YHLADFLVSRHK 309
+A L +R+K
Sbjct: 281 LAIARHLYNRNK 292
>gi|423521962|ref|ZP_17498435.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
gi|401176624|gb|EJQ83819.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
Length = 297
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEKIAKAKDSIS 276
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|423489365|ref|ZP_17466047.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
gi|423495088|ref|ZP_17471732.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|423498118|ref|ZP_17474735.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|423598501|ref|ZP_17574501.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|401151181|gb|EJQ58633.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|401161405|gb|EJQ68772.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|401236771|gb|EJR43228.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|402431601|gb|EJV63665.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
Length = 297
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEKIAKA 271
>gi|445420381|ref|ZP_21435499.1| polyprenyl synthetase [Acinetobacter sp. WC-743]
gi|444758968|gb|ELW83456.1| polyprenyl synthetase [Acinetobacter sp. WC-743]
Length = 309
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V L+ I R + G LI+A+++ V I G+++ I +
Sbjct: 161 ATASSKMVCGQVLDLQAEGKHVDQEHLENIHRNKTGALIQAAIMMAAVTIFSGTDQAIPQ 220
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD + K AG DE +TYP LMG+ A+ YA++L
Sbjct: 221 LRQYGQAIGLAFQVQDDILDVISDTESLGKTAGKDEQVDKSTYPALMGLENAQIYAQQLH 280
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + LAYF A L ++ FL++R
Sbjct: 281 DQAFKALAYFGED-AKELNQISQFLLAR 307
>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
Length = 298
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 43/260 (16%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML----------------- 130
++Y L G+RV LC+A+ +G +ES+ + ACA E++
Sbjct: 40 MRYSVLGG--GKRVRPALCMAAARAMGSDESTALAPACALELIHAYSLVHDDLPAMDDDD 97
Query: 131 -------VTLALNRALLCYAVEHMAT-------KTKNVSPDRLVRAIGEISSAVGTRGVL 176
+A + A A + + T +S + V I E++ A G +G++
Sbjct: 98 LRRGRPTAHIAFDEASAILAGDALQTLAFALLSDAPALSDRQRVTMISELARASGHQGMV 157
Query: 177 AGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCV 235
G+ +++ S G+ +S+++L+ + R + G LIEASV G L +E + L Y +
Sbjct: 158 GGQAIDLESVGQQLSVAQLETMHRHKTGALIEASVRLGALTSETVTECQLSNLTDYASAL 217
Query: 236 GLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELA 287
GLA+QV DD+LD ++ +A + TYP L+G+ GA+++ L+ EA L
Sbjct: 218 GLAFQVQDDLLDIEGDTEVIGKRQGSDAARAKPTYPALLGIEGARQHLARLLDEALSALE 277
Query: 288 YFDPTRAAPLYHLADFLVSR 307
FD + A L +AD++V+R
Sbjct: 278 SFD-SEADTLRAMADYVVAR 296
>gi|423674030|ref|ZP_17648969.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
gi|401309581|gb|EJS14914.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
Length = 297
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 41/231 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R L A+ + G + + ACA EM+ T +L
Sbjct: 46 GKRFRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++AG++ ++
Sbjct: 106 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADME 165
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK ++++EL++I + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 166 AEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDD 225
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELA 287
ILD ++E G ++++TY L V AK +E +A+A ++
Sbjct: 226 ILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEKIAKAKDSIS 276
>gi|392960819|ref|ZP_10326284.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|421054423|ref|ZP_15517391.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|421057124|ref|ZP_15520014.1| Polyprenyl synthetase [Pelosinus fermentans B3]
gi|421067748|ref|ZP_15529192.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|421071285|ref|ZP_15532405.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392440781|gb|EIW18441.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|392447201|gb|EIW24455.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392448103|gb|EIW25307.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|392454716|gb|EIW31538.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|392463679|gb|EIW39578.1| Polyprenyl synthetase [Pelosinus fermentans B3]
Length = 292
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + +GG S + +AC EM+ T +L
Sbjct: 43 GKRLRPILLMAAADSIGGKGSDYLNVACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL A M + V D L++ IGEIS+A G G++ G++++++S
Sbjct: 103 VFGEGMAILAGDGLLTAAFTVMLAQ-PGVQADVLIKVIGEISNAAGALGMIGGQVIDLSS 161
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ + + L ++ + + G L +A+V G + GG+E I L +Y K GLA+Q+ DDI
Sbjct: 162 EGEKIDIDTLSYMHQAKTGALFQAAVRAGAQLAGGAEWQIASLTEYAKQYGLAFQITDDI 221
Query: 246 LD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K K G D +ATY L + A+ A + V A Q L F A L
Sbjct: 222 LDVTGTQEKIGKPVGSDVKNHKATYVTLYSLGKAQDMANQAVTNALQALKQFGQ-EADVL 280
Query: 298 YHLADFLVSR 307
L L++R
Sbjct: 281 RELVRALLTR 290
>gi|387813233|ref|YP_005428715.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338245|emb|CCG94292.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 298
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 43/260 (16%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML----------------- 130
++Y L G+RV LC+A+ +G +ES+ + ACA E++
Sbjct: 40 MRYSVLGG--GKRVRPALCMAAARAMGSDESTALAPACALELIHAYSLVHDDLPAMDDDD 97
Query: 131 -------VTLALNRALLCYAVEHMAT-------KTKNVSPDRLVRAIGEISSAVGTRGVL 176
+A + A A + + T +S + V I E++ A G +G++
Sbjct: 98 LRRGRPTAHIAFDEASAILAGDALQTLAFALLSDAPALSDRQRVTMISELARASGHQGMV 157
Query: 177 AGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCV 235
G+ +++ S G+ +S+++L+ + R + G LIEASV G L +E + L Y +
Sbjct: 158 GGQAIDLESVGRQLSVAQLEAMHRHKTGALIEASVRLGALTSETVTECQLSNLTDYASAL 217
Query: 236 GLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELA 287
GLA+QV DD+LD ++ +A + TYP L+G+ GA+++ L+ EA L
Sbjct: 218 GLAFQVQDDLLDIEGDTEVIGKRQGSDAARAKPTYPALLGIEGARQHLARLLDEALSALE 277
Query: 288 YFDPTRAAPLYHLADFLVSR 307
FD + A L +AD++V+R
Sbjct: 278 SFD-SEADTLRAMADYVVAR 296
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422594221|ref|ZP_16668512.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422680447|ref|ZP_16738719.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 295
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVNTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AKRYA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKRYALELRDQALTALSTFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVER 293
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMVHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
Length = 303
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V+ EL+ I R + G LI+A+++ G V I G+++ I K
Sbjct: 155 ATASSKMVCGQVLDLQAEGKHVAQDELENIHRNKTGALIQAAIMMGAVTIYSGTDQAIPK 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YA+ L
Sbjct: 215 LRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAQTYAQTLH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A + L YF A L ++ FL+ R
Sbjct: 275 DQAFEALEYFGEN-AKELIEISKFLLDR 301
>gi|419839117|ref|ZP_14362535.1| polyprenyl synthetase [Haemophilus haemolyticus HK386]
gi|386909828|gb|EIJ74492.1| polyprenyl synthetase [Haemophilus haemolyticus HK386]
Length = 296
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E M TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-MLTKTPNISSEQKLALVQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTTLRALAEFIITR 294
>gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
Length = 296
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P A L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTAALRALAEFIITR 294
>gi|389709465|ref|ZP_10186841.1| geranyltranstransferase [Acinetobacter sp. HA]
gi|388610158|gb|EIM39289.1| geranyltranstransferase [Acinetobacter sp. HA]
Length = 302
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G+++++ S+GK + L+ I R + G LI A+++ V I G++ I K
Sbjct: 154 ATASSKMVNGQVLDLQSEGKRIDQEALETIHRNKTGALISAAIMMAAVTIFEGTDLAIPK 213
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD + K AG DE +TYP LMG+ AK+YAK+L
Sbjct: 214 LREFGQAIGLAFQVQDDILDIISDTEVLGKTAGKDEQVEKSTYPALMGLEQAKQYAKQLH 273
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A LA+F+ ++A L + FL+ R
Sbjct: 274 DQALNALAHFE-SQAEELTQITQFLLHR 300
>gi|408419431|ref|YP_006760845.1| geranyltranstransferase (Farnesyl-diphosphate synthase) IspA
[Desulfobacula toluolica Tol2]
gi|405106644|emb|CCK80141.1| IspA: geranyltranstransferase (Farnesyl-diphosphate synthase)
[Desulfobacula toluolica Tol2]
Length = 305
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 47/257 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + G + +P CA E++ T +L
Sbjct: 49 GKRLRPILSMAAAQACGKDFLLALPACCAMEIIHTYSLIHDDLPAMDDDDLRRGLPTCHK 108
Query: 136 ----------NRALLCYAVEHMATKTK--NVSPDRLVRA--IGEISSAVGTRGVLAGRIM 181
ALL +A ++ + PD R I S+A G +G++ G+++
Sbjct: 109 KFSEATAILAGDALLTHAFNVLSNPQPFFEIYPDNDTRLQLISIFSAAAGIQGMVEGQML 168
Query: 182 EINSK--GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAY 239
+I S G++ L+ L I L+ GKLI ASV G + G + I KL+ Y +GLA+
Sbjct: 169 DIQSYQPGQNNRLAHLKKIHALKTGKLITASVESGAVSVGADLKTIVKLKCYADQIGLAF 228
Query: 240 QVWDDIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDIL D K AG DE T+P ++G+ +K+YAK LV A E++ FD
Sbjct: 229 QVADDILNIEGDPEIMGKSAGSDEQNDKMTFPAIIGLDESKKYAKMLVENAIDEISNFDE 288
Query: 292 TRAAPLYHLADFLVSRH 308
T AAPL +A+++++R+
Sbjct: 289 T-AAPLRAIANYIINRN 304
>gi|423457638|ref|ZP_17434435.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
gi|401148022|gb|EJQ55515.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
Length = 296
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKEKNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 48/254 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + SC + GG+ +P ACA EM+ T +L
Sbjct: 46 GKRIRPVLVLESCRMCGGDPEVALPFACAVEMIHTYSLIHDDLPAMDDDELRRGRPTNHM 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL A + + ++ ++V A+ +S A G G++ G+ +++
Sbjct: 106 VYGEATAILAGDGLLTAAFQTL--TQAQLTAQQVVDAVACLSLAAGPDGMVGGQALDMAG 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ ++ +EL+ ++ L+ G LI A+ G + GGS E E +R+Y +C+G A+QV DDI
Sbjct: 164 EGRSLTRAELEQLQSLKTGALIAAAAELGCIAAGGSPEQRESVRQYAQCLGRAFQVQDDI 223
Query: 246 LDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP- 296
LD +E G ++ T+ L+G+ ++ EL A+A L F A+P
Sbjct: 224 LDVTSTDEELGKPTGSDREKEKNTFVSLLGLDRSRELVAELTAQAVSALDGF----ASPD 279
Query: 297 -LYHLADFLVSRHK 309
L LA+ L R K
Sbjct: 280 FLVWLANTLAQRTK 293
>gi|392409860|ref|YP_006446467.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
gi|390622996|gb|AFM24203.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
Length = 299
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 133/295 (45%), Gaps = 53/295 (17%)
Query: 63 IDEYMTLKAKKINKAL--------FEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVG 114
I EYM + KAL E A + ++Y G+R+ L +A+ E+VG
Sbjct: 6 IKEYMEARRDLAEKALDAMLPPEDNEPAVLHQAMRYSVFAG--GKRIRPVLAMAAAEVVG 63
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
G+ V+PLA A E + T +L ALL Y
Sbjct: 64 GSGKQVLPLAVALECIHTYSLIHDDLPAMDNDDLRRGKPTVHKVFGEAVAILAGDALLTY 123
Query: 143 A--VEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKR 200
V + ++ + L+ AI E++ A G+ ++AG++M+I +GKDV +++I R
Sbjct: 124 GLGVLSLPEVSRTYRAENLLAAIRELALAAGSTRLIAGQVMDILCEGKDVDKHMVEYIVR 183
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD------NMKK--K 252
+ G LI AS+VCG + G E IE L K+G +G+ +Q+ DD+LD M K +
Sbjct: 184 NKTGALIRASLVCGATLVDGELERIEVLGKFGDLLGMIFQIRDDLLDIEGDPVKMGKAVQ 243
Query: 253 KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K+ +AT P+L+G + L+ A + T A PL + ++ R
Sbjct: 244 KDGDRGKATLPRLLGAERTEEIMYSLIRNAEDTIRPLGET-ANPLVQITHYIGKR 297
>gi|340750026|ref|ZP_08686873.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|340562527|gb|EEO34717.2| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 295
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
+ + ALL +A + K ++S +++V + SS G G++ G++++I S+GK + L
Sbjct: 110 ILIGDALLTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDL 169
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK 252
L ++ + GKLI+ V +I S ED E L KY + +GLA+Q+ DDILD
Sbjct: 170 ETLRYMHAHKTGKLIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDF 229
Query: 253 KEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQEL-AYFDPTRAAPLYHLADF 303
+ G D++TYP ++G+A +K+ E + EA + A F R+ L LAD+
Sbjct: 230 ETIGKPVGSDLEHDKSTYPSILGMAESKKLLSETIEEAKSIIRARFGEERSKTLLDLADY 289
Query: 304 LVSRHK 309
+ +R K
Sbjct: 290 IGNRDK 295
>gi|358011024|ref|ZP_09142834.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. P8-3-8]
Length = 303
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 91/149 (61%), Gaps = 10/149 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASV-VCGVLIGGGSEEDIEK 227
A + ++ G+++++ ++GK V + L+ I R + G LI+A++ + V I G+++ I +
Sbjct: 155 ATASSKMVCGQVLDLQAEGKHVDQAHLENIHRNKTGALIQAAIMLAAVTIFAGTDQAIPQ 214
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD + K AG DE +TYP LMG+ AK YA+EL
Sbjct: 215 LRQYGQAIGLAFQVQDDILDVISDTESLGKTAGKDEQVDKSTYPALMGLEQAKLYAQELH 274
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSRH 308
+A + L YF A L ++ FL++R
Sbjct: 275 DQAFKALEYF-GGHAQELDQISRFLLARQ 302
>gi|423615482|ref|ZP_17591316.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
gi|401260019|gb|EJR66192.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
Length = 296
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ ++E EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEETIAKA 270
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 94/153 (61%), Gaps = 9/153 (5%)
Query: 139 LLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++ ++GK +++ EL++
Sbjct: 118 LLTYAFQVIMAYRQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEY 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DDILD ++E G
Sbjct: 178 IHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGK 237
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEA 282
++++TY L V AK E +A+A
Sbjct: 238 PIGSDVSNEKSTYTTLFTVDRAKDILDETIAKA 270
>gi|384182008|ref|YP_005567770.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G ++ + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|10801560|dbj|BAB16693.1| GGPP synthase 1 [Nicotiana tabacum]
Length = 127
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
+LL +A E++A T VSP R++ AIGE++ ++GT G++AG++ +I G +V L L+
Sbjct: 26 SLLAFAFEYIAAATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+EASVV G ++GGG+ E++EKLR++ +C+GL
Sbjct: 86 FIHIHKTAALLEASVVLGAILGGGTGEEVEKLRRFARCIGL 126
>gi|417842708|ref|ZP_12488789.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21127]
gi|341951267|gb|EGT77844.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21127]
Length = 296
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E M TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-MLTKTPNISSEQKLALVQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|390981228|pdb|4F62|A Chain A, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
gi|390981229|pdb|4F62|B Chain B, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
Length = 317
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 104/180 (57%), Gaps = 11/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E ++ T + P+ ++ I E+ A G G++ G++++++S+ K++SL+EL+
Sbjct: 117 ALQTFAFELLSNPT-SAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQ 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+ + G LI+ASV G L G + E + KL Y +GLA+QV DDI+D + G
Sbjct: 176 MHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLG 235
Query: 257 D--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
++ATYPKL+G+ GAK L +A +++ F ++ PL LA++++ R+
Sbjct: 236 KTQFSDAEANKATYPKLLGLDGAKALVVRLHEQAIAQISEFGD-KSQPLTDLANYIIDRN 294
>gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 297
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 103/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A + ++++ + VR I ++ A G RG+ G+ +++ ++ K V+L+EL+
Sbjct: 118 ALQSFAFELIA-QDESLTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI ASV+ G + S+ ++L +Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALIIASVLMGFNLSAHSQNLAVKQQLERYAQAIGLAFQVQDDILDVIGETHKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GA++ A++L A L P L LA F+V R
Sbjct: 237 GKTVGSDENLHKSTYPKLLGLEGAQKKAQDLYQTALNALEEL-PFDTTALKELAHFIVKR 295
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 122/251 (48%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLALNRALL--------------CYA 143
G+R+ LC+A+ E VGG + CA E++ T +L L C+A
Sbjct: 44 GKRLRPILCMAAAEAVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHA 103
Query: 144 VEHMATKT-----------KNVSPDRLVRAIGE--------ISSAVGTRGVLAGRIMEIN 184
AT + +S DR + G+ IS A G G++ G++ +I
Sbjct: 104 AFDEATAIFAGDALHTLAFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDIL 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++G ++ L +L + RL+ G LI ASV G L G + KL +Y + +GLA+QV DD
Sbjct: 164 AQGGNLGLDQLKELHRLKTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADD 223
Query: 245 IL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+L D + K G D +AT+P LMG+ ++++A +LV ++ Q + +A P
Sbjct: 224 LLNVEGDPLLTGKSIGTDHVLGKATFPNLMGIDASRKFAAQLVEKSLQAIESLG-IKANP 282
Query: 297 LYHLADFLVSR 307
L +A +++ R
Sbjct: 283 LRAVAKYVIER 293
>gi|424065783|ref|ZP_17803257.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408002992|gb|EKG43211.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 295
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG-GSEEDIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G ++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQQRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLARYIVER 293
>gi|402757175|ref|ZP_10859431.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. NCTC 7422]
Length = 305
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 93/150 (62%), Gaps = 12/150 (8%)
Query: 169 AVGTRGVLAGRIMEINSKG--KDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDI 225
A + ++ G+++++ ++G K V +EL+ I R + G LI+A+++ G V I G+++ I
Sbjct: 155 ATASSRMVCGQVLDLQAEGAAKQVDQAELENIHRNKTGALIQAAIMMGAVTIFAGTDQAI 214
Query: 226 EKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKE 277
KLR++G+ +GLA+QV DDILD K AG DE +TYP LMG+A A+ YA+
Sbjct: 215 PKLRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQMQKSTYPALMGLAQAQVYAQT 274
Query: 278 LVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L +A + LAYF A L ++ FL++R
Sbjct: 275 LHDQAFEALAYFGED-AKELVAISQFLLAR 303
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422581075|ref|ZP_16656219.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVNTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AKRYA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKRYALELRDQALTALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVER 293
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|423377963|ref|ZP_17355247.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
gi|423547482|ref|ZP_17523840.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|401179203|gb|EJQ86376.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|401636229|gb|EJS53983.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
Length = 296
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ ++E EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEETIAKA 270
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 104/180 (57%), Gaps = 11/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E ++ T + P+ ++ I E+ A G G++ G++++++S+ K++SL+EL+
Sbjct: 115 ALQTFAFELLSNPT-SAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQ 173
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+ + G LI+ASV G L G + E + KL Y +GLA+QV DDI+D + G
Sbjct: 174 MHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLG 233
Query: 257 D--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
++ATYPKL+G+ GAK L +A +++ F ++ PL LA++++ R+
Sbjct: 234 KTQFSDAEANKATYPKLLGLDGAKALVVRLHEQAIAQISEF-GDKSQPLTDLANYIIDRN 292
>gi|386022367|ref|YP_005940392.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
Length = 295
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 115/252 (45%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+++ ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALNGDKTDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E MA N L +R ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFEAMAQAEHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV D
Sbjct: 163 SVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQD 222
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K + A D+ TYP L+G+A AK YA EL +A L FD A
Sbjct: 223 DILDVESDTATLGKHQGADIARDKPTYPALLGMAAAKAYALELRDQALHALRPFDFA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|423441083|ref|ZP_17417989.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|423448761|ref|ZP_17425640.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|423464157|ref|ZP_17440925.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|423533499|ref|ZP_17509917.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
gi|423541245|ref|ZP_17517636.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|423622735|ref|ZP_17598513.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|401129355|gb|EJQ37038.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|401172433|gb|EJQ79654.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|401260855|gb|EJR67023.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|402417744|gb|EJV50044.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|402420424|gb|EJV52695.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|402463718|gb|EJV95418.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
Length = 296
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ ++E EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEETIAKA 270
>gi|343519656|ref|ZP_08756635.1| polyprenyl synthetase [Haemophilus pittmaniae HK 85]
gi|343392503|gb|EGV05069.1| polyprenyl synthetase [Haemophilus pittmaniae HK 85]
Length = 297
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E M T+T +S ++ + + ++ A G G+ G+ +++ S+ K VSL+EL+
Sbjct: 118 ALQTLAFE-MLTETPVISAEQKLLLVKTLAQASGVEGMCLGQSLDLISEHKQVSLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILD----NMKK 251
I R + G L+ A+++ G + + ++L++Y + +GLA+QV DDILD
Sbjct: 177 IHRNKTGALLNAALMMGFICSPHFNDTTLAKQLQRYAQAIGLAFQVQDDILDIEGETATL 236
Query: 252 KKEAGD----DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG D++TYPKL+G+ GAK+ A+EL +A Q LA P + L LA+F+V+R
Sbjct: 237 GKTAGSDLNLDKSTYPKLLGLTGAKQKAQELYQDALQALADI-PFDSKALRALAEFIVNR 295
>gi|431925836|ref|YP_007238870.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
gi|431824123|gb|AGA85240.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
Length = 296
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 115/252 (45%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+++S ACA E++ +L
Sbjct: 44 GKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E MA N L +R ++ A G G++ G+ +++
Sbjct: 104 AFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAGPAGMVGGQAIDLG 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV D
Sbjct: 164 SVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQD 223
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K + A D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 224 DILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDIA-AE 282
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 283 PLRELARYIVER 294
>gi|378697711|ref|YP_005179669.1| geranyltranstransferase [Haemophilus influenzae 10810]
gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810]
Length = 296
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDQRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|423478323|ref|ZP_17455038.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|402428485|gb|EJV60582.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
Length = 296
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|342904302|ref|ZP_08726103.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21621]
gi|341953542|gb|EGT80046.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21621]
Length = 296
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E M TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-MLTKTPNISSEQKLALVQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGG-SEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ ++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLITALKLGFICSSHFTDKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|422630479|ref|ZP_16695676.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 295
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLTPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLARYIVER 293
>gi|423400972|ref|ZP_17378145.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
gi|401653962|gb|EJS71505.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
Length = 296
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEETIAKA 270
>gi|421466128|ref|ZP_15914814.1| polyprenyl synthetase [Acinetobacter radioresistens WC-A-157]
gi|400203639|gb|EJO34625.1| polyprenyl synthetase [Acinetobacter radioresistens WC-A-157]
Length = 302
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G++M++ ++GK V S+L+ I + G LI+A+++ V I G+++ I +
Sbjct: 154 ATASSKMVCGQVMDLQAEGKQVDQSQLENIHCNKTGALIQAAIMMAAVTIFKGTDQAIPQ 213
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR+YG+ +GLA+QV DDILD + + K AG DE +TYP LMG+ A+ YAK+L
Sbjct: 214 LRQYGQAIGLAFQVQDDILDIVSETEVLGKTAGKDEQVEKSTYPALMGLEQAQLYAKQLH 273
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A L YF A L ++ FL+SR
Sbjct: 274 DQAFSALEYFGEA-AEELNTISQFLLSR 300
>gi|386759023|ref|YP_006232239.1| geranyltranstransferase [Bacillus sp. JS]
gi|384932305|gb|AFI28983.1| geranyltranstransferase [Bacillus sp. JS]
Length = 296
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ + +A G +E +P+ CA EM+ T +L
Sbjct: 45 GKRLRPLIVLAVLNAYGKSEQDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 --NRALLCYAVEHMATKT---------KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A A + + T++ VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ + V+L EL+ I + KL+ V+ G ++ EEDIE LR + +G+ +Q+ DD
Sbjct: 165 AENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +++ G +D++TYP L+ + GAKR + EA + + +
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKRKLDAHIKEAKRLIGGL-SLQQDL 283
Query: 297 LYHLADFLVSR 307
LY L D + +R
Sbjct: 284 LYELCDLIAAR 294
>gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
Length = 301
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 17/187 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPD-------RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV 190
AL +A E ++ + D R +R I +S A G G++ G+++++N+ + +
Sbjct: 115 ALQTFAFELLSASYNEIDTDNLADCKTRQLRLIRSLSRASGRFGMVTGQMIDLNNVDRSI 174
Query: 191 SLSELDFIKRLRCGKLIEASVVCGVL-IGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
+L L+ + + + G LI ASV+ G +G ++ + +L KY +GLA+QV DDI+D
Sbjct: 175 TLETLEKMHQHKTGALIRASVLMGAQSVGIEDQKILSQLDKYASAIGLAFQVQDDIIDIT 234
Query: 250 KK-----KKEAGDDEA---TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
K + D EA TYPKL+G+ GA+ A L EA + ++ F +AAPL LA
Sbjct: 235 SDTQTLGKNQFSDSEANKPTYPKLLGLEGAREKANTLKQEAIEAISPFGD-KAAPLIQLA 293
Query: 302 DFLVSRH 308
+++SR+
Sbjct: 294 SYIISRN 300
>gi|416891716|ref|ZP_11923263.1| IspA protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347815264|gb|EGY31904.1| IspA protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 311
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 12/181 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T ++S + + I +S+A G +G+ G+ +++ S+ K +SL+EL+
Sbjct: 132 ALQSFAFE-ILTDIPDLSAQQKLALIKTLSAAAGVKGMCLGQSLDLISEQKAISLTELEH 190
Query: 198 IKRLRCGKLIEASVVCGVLIG--GGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I + G L+ A++ G + E +++L +Y +GLA+QV DDILD +
Sbjct: 191 IHLNKTGALLTAALKLGFICSPHFADEALLQQLERYATAIGLAFQVQDDILDIEGNSETI 250
Query: 256 G--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G+AGAK+ A+EL A EL P LY LA+F++ R
Sbjct: 251 GKPVGSDLNSDKSTYPKLLGLAGAKQKAQELYETALAELQNL-PFDTTALYALAEFIIKR 309
Query: 308 H 308
Sbjct: 310 Q 310
>gi|440742834|ref|ZP_20922156.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
gi|440376685|gb|ELQ13348.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
Length = 295
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLARYIVER 293
>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|422673861|ref|ZP_16733218.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|63254579|gb|AAY35675.1| farnesyl-diphosphate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 295
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLARYIVER 293
>gi|417840203|ref|ZP_12486351.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M19107]
gi|341949682|gb|EGT76284.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M19107]
Length = 296
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E M TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-MLTKTPNISSEQKLALVQILAKGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
Length = 295
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 115/252 (45%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+++S ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E MA + N L +R ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV D
Sbjct: 163 SVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQD 222
Query: 244 DILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K + D D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDFA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|339495741|ref|YP_004716034.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338803113|gb|AEJ06945.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 296
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+++S ACA E++ +L
Sbjct: 44 GKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
L A E MA + N L +R ++ A G G++ G+ +++
Sbjct: 104 AFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLG 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV D
Sbjct: 164 SVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQD 223
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K + A D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 224 DILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDFA-AE 282
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 283 PLRELARYIVER 294
>gi|421618908|ref|ZP_16059875.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
gi|409779088|gb|EKN58762.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
Length = 295
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 115/253 (45%), Gaps = 45/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G++++ ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALNGDKANADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVR--AIGEISSAVGTRGVLAGRIMEI 183
L A E MA N PD +R ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFEAMAQDRHN-PPDATLRLRMFSVLARAAGPAGMVGGQAIDL 161
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVW 242
S G + L+ + R + G LIEASV G L G ++ D + L +Y + +GLA+QV
Sbjct: 162 GSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADSLAALSQYARAIGLAFQVQ 221
Query: 243 DDILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD K + D D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 222 DDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKVYASELRDQALHALQPFDEA-A 280
Query: 295 APLYHLADFLVSR 307
PL LA ++V R
Sbjct: 281 EPLRELARYIVER 293
>gi|365157809|ref|ZP_09354054.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
gi|363622479|gb|EHL73638.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
Length = 295
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 41/233 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ G + M A A EM+ T +L
Sbjct: 46 GKRIRPVLLFAAINSFGKDPERGMDAAAALEMIHTYSLIHDDLPSMDDDDLRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA + +A ++ ++S V I +++ A G G++AG++ ++
Sbjct: 106 VYGEANAILAGDALLTYAFQIIA-QSPDLSEKEKVAIIEQLAKAAGPEGMVAGQVADMEG 164
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ K ++L EL+ + R + G+LI SV G LIGG +E ++ KY +G+A+Q+ DDI
Sbjct: 165 EKKALTLEELEAVHRNKTGRLIAFSVRAGALIGGATEAELAVFEKYAYHIGIAFQIQDDI 224
Query: 246 LDNM----KKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFD 290
LD + K K G D A TYP L+ V GA+ KE V +A +EL D
Sbjct: 225 LDIVGSEEKLGKRVGSDIANHKNTYPALLTVRGAREKLKEHVDQAIEELNRLD 277
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG +CA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVNTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AKRYA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKRYALELRDQALTALSTFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVER 293
>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLARYIVER 293
>gi|315125809|ref|YP_004067812.1| geranyltranstransferase [Pseudoalteromonas sp. SM9913]
gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas sp. SM9913]
Length = 295
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 23/208 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G +++ A + L TLA E +A T S + ++ I ++
Sbjct: 100 TCHIVYGEAQAIL----AGDALQTLAF---------ELIAKHTFKCSTEAQLKMIAALAH 146
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIG-GGSEEDIEK 227
A G +G++AG+ +I + K +++ EL+ I +L+ G LI ++ G L S++ ++
Sbjct: 147 ASGLQGMVAGQGRDIAATDKVITVDELERIHKLKTGALINCAITLGALCAPNTSQQTLDN 206
Query: 228 LRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELV 279
L +G +GLA+QV DDIL D + K G D +ATYP L+G+ GAK+ A+ L+
Sbjct: 207 LSTFGYAIGLAFQVHDDILDVEGDTLTLGKPQGSDIAANKATYPALLGMLGAKQKAQNLI 266
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A++ LA D L LA++L+ R
Sbjct: 267 QQAHEALANIDAD-TTDLAALANYLIER 293
>gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
Length = 297
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A + ++++ + V I ++ A G RG+ G+ +++ ++ K V+L+EL+
Sbjct: 118 ALQSFAFELIA-QDESLTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI ASV+ G S+ K L +Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALIVASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GAK+ A++L A LA P L LADF+V R
Sbjct: 237 GKTVGSDENLHKSTYPKLLGLEGAKQKAQDLYQLALDSLAKL-PFDTTALKELADFIVKR 295
>gi|386288981|ref|ZP_10066120.1| geranyltranstransferase [gamma proteobacterium BDW918]
gi|385277985|gb|EIF41958.1| geranyltranstransferase [gamma proteobacterium BDW918]
Length = 305
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE 222
I ++S+A G RG++ G+ +++ + + + L L + +L+ G LI ++ +
Sbjct: 152 IQQLSAAAGPRGMVGGQAIDLAAVNQQLDLDALQTMHQLKTGALIRVAIAMSATWCEADQ 211
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILD---NMKK-KKEAGDDEA----TYPKLMGVAGAKRY 274
+ + L +YGK +GL++QV DDI+D N + K G D+A T+P L+G+ GAK+
Sbjct: 212 QQLTALDRYGKAIGLSFQVQDDIIDIESNTETLGKTQGADQALNKPTFPALLGIDGAKQL 271
Query: 275 AKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
A++L AEA Q L FD RAAPL L+ ++++R
Sbjct: 272 AQDLHAEALQALTGFDE-RAAPLRDLSHYIIARQ 304
>gi|422667496|ref|ZP_16727359.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 295
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 45/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+RV L A+CE +GG ACA E++ +L ++
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 138 AL--------------LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
A L + T + RL + + +++A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHPTSRDAETRL-QMVTALATAAGPAGMVGGQAIDL 161
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVW 242
S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+QV
Sbjct: 162 GSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQ 221
Query: 243 DDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD A
Sbjct: 222 DDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-A 280
Query: 295 APLYHLADFLVSR 307
PL LA ++V R
Sbjct: 281 EPLRQLARYIVER 293
>gi|62959219|gb|AAY23717.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP1768]
Length = 145
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 72/110 (65%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
A+L A E +A ++ NV DRL+R +GE++ G G++ G+++++ S+G+ V L L++
Sbjct: 34 AMLSRAFEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEY 93
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
I + L+ A VV G LIGG ++E ++ +R Y +GLA+Q+ DDILD
Sbjct: 94 IHLHKTAALLRACVVTGALIGGANDEQLQAMRTYANGIGLAFQIIDDILD 143
>gi|261416040|ref|YP_003249723.1| polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790913|ref|YP_005822036.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 48/252 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ ++ GG + A EML T +L
Sbjct: 52 GKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPCVDNDDYRRGKLTSHK 111
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL +A E M KT N +AI ++ +GT G++ G + +I
Sbjct: 112 KFGEATAVMAGDALCIHAFEMMG-KTGNA------KAIELLAHLLGTYGMIGGEMTDIEC 164
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+GK V L +D+I + LIEAS++ G ++ SE+D+E +R YG+ +GLA+Q+ DDI
Sbjct: 165 EGKTVDLEIVDYIHYHKTAALIEASLLVGAMLAKASEKDMEIIRNYGRSIGLAFQIVDDI 224
Query: 246 LDNMKKKKEAGDD--------EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + +E G D +ATYP ++G+ ++ A+EL E+ + L + L
Sbjct: 225 LDIVSTTEELGKDAGSDIEKGKATYPSIVGLEKSRERARELYEESIKALDGL-TCDTSIL 283
Query: 298 YHLADFLVSRHK 309
+A ++++R K
Sbjct: 284 RSIAAYIITRVK 295
>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
Length = 287
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 40/249 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +++ + N +MP+ACA EM+ T +L
Sbjct: 38 GKRIRPILMLSTYSIYKNNYKDIMPMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHK 97
Query: 136 --NRALLCYAVEHMATKTKNV------SPDRL-VRAIGEISSAVGTRGVLAGRIMEINSK 186
A+ A + + + N+ + D+L + A IS A G G++ G++++I S+
Sbjct: 98 VFGEAIAILAGDGLLNEAMNIMFNYSLTHDKLALMASKVISEASGAEGMIGGQVVDIISE 157
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
G+++S +L ++ + + G+LI++S++ G ++GG S+E+IE L ++G +GLA+Q+ DDIL
Sbjct: 158 GQEISPDKLKYMHKNKTGQLIKSSIIAGAILGGASKEEIEILDEFGSKLGLAFQIKDDIL 217
Query: 247 DNMKKKKEAG-----DDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + K G DDE T+ G+ K EL + + L+Y L
Sbjct: 218 DVIGDSKILGKEVHKDDENNKTTFISHFGLKKCKELCVELTEQCIKLLSYI-SKDTKQLK 276
Query: 299 HLADFLVSR 307
+A FL+ R
Sbjct: 277 DIALFLMKR 285
>gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS]
gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS]
Length = 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 10/163 (6%)
Query: 155 SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG 214
S R + I ++ A G+RG+ G+ +++ S G+ ++++EL+ + + G LI ASV G
Sbjct: 134 SDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELENMHIHKTGALIRASVKMG 193
Query: 215 VLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDILD-----NMKKKKEAGD---DEATYPKL 265
L E +EKL Y KC+GLA+Q+ DDILD + K + D ++ TYP L
Sbjct: 194 ALACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVESSTTVLGKAQGADIAHNKVTYPSL 253
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+G+ AK+ A+EL+ +A L FD +A PL +A++++ R
Sbjct: 254 LGLNQAKQMAQELITDAITSLTNFDQ-KADPLRWIAEYIIKRQ 295
>gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
Length = 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFNTTALRALAEFIITR 294
>gi|416019022|ref|ZP_11565915.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024129|ref|ZP_11568308.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVNTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AKRYA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEPAKRYALELRDQALTALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVER 293
>gi|417845649|ref|ZP_12491675.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21639]
gi|341954718|gb|EGT81191.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21639]
Length = 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E M TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-MLTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLVSEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGSDLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTIALRALAEFIITR 294
>gi|422402853|ref|ZP_16479913.1| geranyltranstransferase, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 51/257 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVNTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AKRYA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEPAKRYALELRDQALTALSPFDA 278
Query: 292 TRAAPLYHLADFLVSRH 308
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVERR 294
>gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
RdAW]
gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
RdAW]
Length = 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|417841558|ref|ZP_12487661.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M19501]
gi|417841998|ref|ZP_12488093.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M19501]
gi|341947778|gb|EGT74419.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M19501]
gi|341948779|gb|EGT75394.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M19501]
Length = 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISSEQKLALVQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+R+ L A+ LVG + +ACA E++
Sbjct: 47 GKRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPCMDNDVLRRGKPTVHV 106
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L + +L A + ++ P + I +++ A G+RG+ G+ +++ +
Sbjct: 107 EYDDATALLVGDSLQALAFQSLSEHPLTEDPSEQLSMITQLARASGSRGMAGGQAIDLAA 166
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDD 244
GK +S EL+++ + G LI ASV+ G G + D +E+L YGK VGL +QV DD
Sbjct: 167 VGKQLSREELEYMHIHKTGALIRASVLLGAACGARLDSDRLERLDHYGKLVGLLFQVVDD 226
Query: 245 ILDNMKKK--------KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K+A +++ TY L+G+ A+ A+ L+A+A + L F P +AA
Sbjct: 227 ILDTQSDTATLGKTAGKDADNNKPTYVTLLGMTEARALAESLLADAREALTPFGP-QAAR 285
Query: 297 LYHLADFLVSR 307
L LA F+V R
Sbjct: 286 LDELATFIVHR 296
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE EKL + K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKGILEETIAKA 270
>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
Length = 289
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 40/249 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +++ + N +MP+ACA EM+ T +L
Sbjct: 40 GKRIRPILMLSTYSIYKDNYKDIMPMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHK 99
Query: 136 --NRALLCYAVEHMATKTKNV------SPDRL-VRAIGEISSAVGTRGVLAGRIMEINSK 186
A+ A + + + NV + D++ + A IS A G G++ G++++I S+
Sbjct: 100 VFGEAIAILAGDGLLNEAMNVMFNYSLTHDKVALMASKVISEAAGAEGMIGGQVVDIISE 159
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
G+ +S+ +L ++ + + G+LI++S++ G ++GG S+E++E L ++G +GLA+Q+ DDIL
Sbjct: 160 GQKISIDKLKYMHKNKTGQLIKSSIIAGAILGGASKENLEILDEFGSKLGLAFQIKDDIL 219
Query: 247 DNMKKKKEAG-----DDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + K G DDE T+ G+ K EL + + L+Y L
Sbjct: 220 DVIGDSKVLGKEVHKDDENNKTTFISCFGLEKCKELCVELTEQCIKLLSYI-GKDTKQLE 278
Query: 299 HLADFLVSR 307
++A FL+ R
Sbjct: 279 NIALFLMKR 287
>gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031]
gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031]
Length = 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|359436809|ref|ZP_09226891.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20311]
gi|359446265|ref|ZP_09235961.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20439]
gi|358028505|dbj|GAA63140.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20311]
gi|358039948|dbj|GAA72210.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20439]
Length = 295
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 23/208 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G +++ A + L TLA E +A T S + ++ I E++
Sbjct: 100 TCHIVYGEAQAIL----AGDALQTLAF---------ELIAKHTFKCSTEAQLKMIAELAH 146
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEK 227
A G +G++AG+ +I + K +++ EL+ I +L+ G LI ++ G L S+ ++
Sbjct: 147 ASGLQGMVAGQGRDIAATDKVITVDELERIHKLKTGALINCAITLGALCAPNISQHTLDN 206
Query: 228 LRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELV 279
L +G +GLA+QV DDIL D + K G D +ATYP L+G+ GAK+ A L+
Sbjct: 207 LSTFGYAIGLAFQVHDDILDVEGDTLTLGKPQGSDIAANKATYPALLGMLGAKQKALNLI 266
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A++ LA D + L LA++L+ R
Sbjct: 267 QQAHEALANIDADTTS-LAALANYLIER 293
>gi|422639114|ref|ZP_16702544.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
Length = 295
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAGLEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLARYIVER 293
>gi|392556152|ref|ZP_10303289.1| geranyltranstransferase [Pseudoalteromonas undina NCIMB 2128]
Length = 295
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 23/208 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G +++ A + L TLA E +A T S + ++ I E++
Sbjct: 100 TCHIVYGEAQAIL----AGDALQTLAF---------ELIAKHTFKCSTEAQLKMIAELAH 146
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEK 227
A G +G++AG+ +I + K +++ EL+ I +L+ G LI ++ G L S+ ++
Sbjct: 147 ASGLQGMVAGQGRDIAATDKVITVDELERIHKLKTGALINCAITLGALCAPNISQHTLDN 206
Query: 228 LRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELV 279
L +G +GLA+QV DDIL D + K G D +ATYP L+G+ GAK+ A L+
Sbjct: 207 LSTFGYAIGLAFQVHDDILDVEGDTLTLGKPQGSDIAANKATYPALLGMLGAKQKALNLI 266
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A++ LA D + L LA++L+ R
Sbjct: 267 QQAHEALANIDAD-TSDLAALANYLIER 293
>gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
Length = 296
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFNTTALRALAEFIITR 294
>gi|315223294|ref|ZP_07865155.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
gi|315187726|gb|EFU21480.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
Length = 300
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 15/144 (10%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V I E+S A GT G++ G+++++ +GKD+SL+EL I + GKL+ + LI
Sbjct: 132 VNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQTIHANKTGKLLTYPFIAAGLIAE 191
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILD---NMKK-----KKEAGDDEATYPKLMGVAGA 271
E EKL+ G+ +GLA+QV DDILD N + +K+ ++ATYP ++G+ GA
Sbjct: 192 VGESQQEKLKAIGQLLGLAFQVRDDILDITANFEDLGKTPQKDVAAEKATYPAILGLNGA 251
Query: 272 KRYAKE-------LVAEANQELAY 288
KR+ +E L+AE ELA+
Sbjct: 252 KRFFEEQLEETEHLLAEVETELAF 275
>gi|398996325|ref|ZP_10699184.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
gi|398127099|gb|EJM16514.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
Length = 295
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 119/253 (47%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 --NRALLCYAVEHMATKTKNVSPD-RLVRAIGEI--------SSAVGTRGVLAGRIMEIN 184
+ A A + + + + D RL A EI + A G G++ G+ +++
Sbjct: 103 KFDEACAILAGDGLQSLAFSALLDPRLNPADAEIRLQMVSALAVAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + + L+++ R + G LIE SV G L G +E+D + L+ Y + VGLA+QV D
Sbjct: 163 SVGLKLDQTALEYMHRHKTGALIEVSVKLGALASGRAEKDELNALQSYAQAVGLAFQVQD 222
Query: 244 DILD-----NMKKKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K++ D D+ TYP L+G+ AK YA EL +A + L FD T A
Sbjct: 223 DILDVESDTETLGKRQGADIARDKPTYPALLGLDAAKAYALELRDQALRALRPFDAT-AE 281
Query: 296 PLYHLADFLVSRH 308
PL LA ++V R
Sbjct: 282 PLRDLARYIVDRR 294
>gi|322434675|ref|YP_004216887.1| polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
Length = 320
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 42/225 (18%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G ++++ A + L TLA A H T +V + E+S+
Sbjct: 110 TCHVVFGEATAIL----AGDALQTLAFQ----TIANLHAPAAT-------VVSILREVSA 154
Query: 169 AVGTR-------------GVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGV 215
AV T G++ G++M+I S+G + ++ I R + G LI SVV G
Sbjct: 155 AVATGVGSVGDLHTSLPPGMIGGQVMDIESEGVKPTAELVEAIHRAKTGALITVSVVAGG 214
Query: 216 LIGGGSE-----EDIEKLRKYGKCVGLAYQVWDDILDNMKKK--------KEAGDDEATY 262
L+G G + + I +LR +G+ GLA+Q+ DD+LD + K+ D+AT+
Sbjct: 215 LLGLGDQPSTTHDTIARLRTFGQKAGLAFQIVDDVLDMTQDSAQLGKTAGKDTATDKATW 274
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
P + G+ + A+EL+A+A LA F T AAPL LA+FL R
Sbjct: 275 PAVFGIPQSIHDAEELIADAFAALARFAET-AAPLKALANFLTER 318
>gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700]
gi|422336038|ref|ZP_16417011.1| geranyltranstransferase [Aggregatibacter aphrophilus F0387]
gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Aggregatibacter aphrophilus NJ8700]
gi|353346224|gb|EHB90509.1| geranyltranstransferase [Aggregatibacter aphrophilus F0387]
Length = 296
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 12/181 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T ++S + + I +S+A G +G+ G+ +++ S+ K +SL+EL+
Sbjct: 117 ALQSFAFE-ILTDIPDLSAQQKLALIKTLSAAAGVKGMCLGQSLDLISEQKAISLTELEH 175
Query: 198 IKRLRCGKLIEASVVCGVLIG--GGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I + G L+ A++ G + E +++L +Y +GLA+QV DDILD +
Sbjct: 176 IHLNKTGALLTAALKLGFICSPHFADEALLQQLERYATAIGLAFQVQDDILDIEGNSETI 235
Query: 256 G--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G+AGAK+ A+EL A EL P LY LA+F++ R
Sbjct: 236 GKPVGSDLNSDKSTYPKLLGLAGAKQKAQELYETALAELQNL-PFDTTALYALAEFIIKR 294
Query: 308 H 308
Sbjct: 295 Q 295
>gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
NT127]
gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
NT127]
Length = 296
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 52/295 (17%)
Query: 61 IQIDEYMTLKAKKINKAL--------FEGAAVPLILQYPTLPNHEGERVHGTLCIASCEL 112
+++ Y+T + K I++AL + + ++Y G+R+ L +A+ E
Sbjct: 1 MELKSYLTARGKLIDQALDRFLPRASVKPRTIHKAMRYSLFAG--GKRLRPALTLAAAEA 58
Query: 113 VGGNESSVMPLACAAEMLVTLAL--------------------------------NRALL 140
G + +P ACA E + T +L ALL
Sbjct: 59 CDGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALL 118
Query: 141 CYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKR 200
A E +A + K S ++ IGE++ A G++ ++ G++ ++ +GK +S +EL +I R
Sbjct: 119 TIAFEILA-QAKETSRYKMPALIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIHR 177
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAG 256
+ L+ AS+ G + S ++ L ++G+ +GLA+QV DDILD K K AG
Sbjct: 178 CKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEKLGKTAG 237
Query: 257 DD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
D +ATYP + G+ ++ A L A+ L F + A L AD+L+ R
Sbjct: 238 KDVAATKATYPAIFGLERSREEAHRLTLAAHAALKPFGKS-GATLRAFADYLLVR 291
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 46/253 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +AS ++ + VMP AC EM+ T +L
Sbjct: 44 GKRLRPILSLASYQMFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHK 103
Query: 136 ----------NRALLCYAVEHM---ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
LL Y+ E M A K ++ + + AI EIS++ G G++ G++++
Sbjct: 104 VYNEGVAILAGDGLLNYSFELMLENAIKQNDIY--KHIVAIKEISNSAGVHGMIGGQVVD 161
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ S+ K + LD+I + LI S+ G +I G EEDI + K G +GLA+Q+
Sbjct: 162 LESENKIIDKEMLDYIHINKTAALITTSLKVGAIIAGAQEEDIRNMEKVGLNLGLAFQIK 221
Query: 243 DDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDIL D K K G D ++TYP L+G+ + L Q L + ++A
Sbjct: 222 DDILDVVGDEAKLGKSIGRDLEKHKSTYPALIGLEASIEKVGALTNNVKQLLHRY-SSKA 280
Query: 295 APLYHLADFLVSR 307
L L D+L SR
Sbjct: 281 EFLLELCDYLTSR 293
>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H++++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLSSRNAATR----LQMVSTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLDAAKGYALELRDQALAALSLFDT 278
Query: 292 TRAAPLYHLADFLVSR 307
T A PL LA ++V R
Sbjct: 279 T-AEPLRELARYIVER 293
>gi|350266625|ref|YP_004877932.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599512|gb|AEP87300.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 296
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ + +A G +E +P+ CA EM+ T +L
Sbjct: 45 GKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 --NRALLCYAVEHMATKT---------KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A A + + T++ VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHLSDEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ + V+L EL+ I + KL+ SV+ G ++ EEDIE LR + + +G+ +Q+ DD
Sbjct: 165 AENRQVTLEELESIHERKTAKLLGFSVIAGAILADAPEEDIETLRTFSRHIGIGFQIRDD 224
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K K G D ++TYP L+ + GAK + EA + + +
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL- 283
Query: 297 LYHLADFLVSR 307
LY L D + +R
Sbjct: 284 LYELCDLIAAR 294
>gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
22.1-21]
gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
22.1-21]
Length = 296
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E GG + P+ACA EM+ T +L
Sbjct: 43 GKRLRPILVLAAGEAFGGAPERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGT-RGVLAGRIMEIN 184
L+ +A +A + ++ VR I E++ GT G++AG+I+++
Sbjct: 103 QFDEATAILAGDGLMTHAFRILAEM--DAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLE 160
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ K + L FI R + G LI +VVCG ++ G +E D+ L YG VGLA+Q+ DD
Sbjct: 161 AERKPIDAERLKFIHRAKTGALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADD 220
Query: 245 ILDNMKKK--------KEAGDDEATYPKLMGVAGAKR 273
ILD K+A +ATYP L G+ +++
Sbjct: 221 ILDETATAEQLGKTPGKDAAAGKATYPALYGLEASRK 257
>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
Length = 303
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 102/184 (55%), Gaps = 13/184 (7%)
Query: 138 ALLCYAVEHMATKTK-NVSPDRLV---RAIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
AL+ YA E A + ++ PD + R+IG ++ G G++ G+ +++ G D+
Sbjct: 121 ALMMYAFETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPRD 180
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
+LDFI RL+ G L+EAS++ G ++GG +EED + + + +G+A+Q+ DDILD +
Sbjct: 181 KLDFIYRLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSEA 240
Query: 254 E----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
E AG D + TY L G+ AK+ ++L A+A ++L P L +L L+
Sbjct: 241 ELGKPAGSDARNGKTTYVTLEGLEKAKKDVEQLSAQAIEDLEQL-PGNNEFLENLIRMLM 299
Query: 306 SRHK 309
R K
Sbjct: 300 DRKK 303
>gi|359455285|ref|ZP_09244520.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20495]
gi|414071233|ref|ZP_11407205.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. Bsw20308]
gi|358047628|dbj|GAA80769.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20495]
gi|410806307|gb|EKS12301.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. Bsw20308]
Length = 295
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 23/208 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G +++ A + L TLA E +A + N S V+ I ++
Sbjct: 100 TCHIVYGEAQAIL----AGDALQTLAF---------ELIAKHSFNCSAQTQVKMIAALAH 146
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEK 227
A G G+++G+ ++I + K +++ EL+ I +L+ G LI ++ G L E+ +E
Sbjct: 147 ASGLEGMVSGQGLDIAATDKIITVQELERIHKLKTGALINCAITLGALCSENVDEQTLEN 206
Query: 228 LRKYGKCVGLAYQVWDDILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELV 279
L +G +GLA+QV DDILD + K G D +ATYP L+G+ GAK A+ L+
Sbjct: 207 LSVFGYAIGLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATYPALLGMLGAKEKAQNLI 266
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A++ LA D L LA++L+ R
Sbjct: 267 QQAHEALANIDAD-TTLLASLANYLIER 293
>gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
Length = 296
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFVITR 294
>gi|357012959|ref|ZP_09077958.1| polyprenyl synthetase [Paenibacillus elgii B69]
Length = 301
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E +GG+ + +P A A E++ T +L
Sbjct: 48 GKRLRPILVLAAAEALGGSPEAAVPAALAVEIIHTYSLIHDDLPAMDNDDFRRGKPTNHK 107
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A + + + N+ DR+V + E+S G G++ G+ ++
Sbjct: 108 VYGEAMAILAGDALLTHAFYSVVQSARKHNIPADRVVDIVEELSRLSGAPGMVGGQAADM 167
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ L EL++I + LI S+ G I G +E + L ++G C+GLA+Q+ D
Sbjct: 168 LGEQGVTKLEELEYIHLHKTSDLIVFSLKAGGRIAGATEAQLAALERFGTCIGLAFQIQD 227
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD + + + G + TYP +G+ + A EL EA Q + D R
Sbjct: 228 DVLDLIGDESKLGKPVQSDVKQQKVTYPYFIGIEASISKAGELTREAKQAILAADFPRPE 287
Query: 296 PLYHLADFLVSR 307
L LAD+L+ R
Sbjct: 288 RLLELADYLMKR 299
>gi|424070488|ref|ZP_17807923.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408000494|gb|EKG40847.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 295
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLALYIVER 293
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 41/215 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E G + + + A A EM+ T +L
Sbjct: 45 GKRIRPVLLLATIEAFGKSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL Y+ E +A+ K++ P + + + A G G++ G++ ++
Sbjct: 105 VFGEATAILAGDALLTYSFEVIAS-MKDILPQTKIELVRLFAKAAGPEGMVGGQVADMEG 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ K ++L EL++I R + GKL++ +VV G +IGG S+E++ ++Y + +GLA+Q+ DDI
Sbjct: 164 ERKTLTLEELEYIHRNKTGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDI 223
Query: 246 LDNMKKKKEAG--------DDEATYPKLMGVAGAK 272
LD + + G +D++TYP L+ + GAK
Sbjct: 224 LDIEGTEDKIGKRVGSDVNNDKSTYPSLLTLEGAK 258
>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 297
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 128/277 (46%), Gaps = 51/277 (18%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVP--LI--LQYPTLPNHEGERVHGTLCIASCELVG 114
+ +YM + +++ AL G P L+ ++Y L G+R+ L IA+ EL G
Sbjct: 4 EFQQYMAARRQQVEAALDRYTAGLDAPSRLVEAMRYSLLAG--GKRLRPILTIAASELFG 61
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
+ VMP ACA EM+ T +L ALL
Sbjct: 62 LEAADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLAGDALLTQ 121
Query: 143 AVEHMATKTK--NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKR 200
A MA + V P R VRA E++ A G G++ G++ ++ +G+ +L I
Sbjct: 122 AFALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEPQLRRIHS 181
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK-------- 252
L+ G L A+V G ++ G EED+++L +Y GLA+Q+WDD+LD
Sbjct: 182 LKTGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAALTGKGVG 241
Query: 253 KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYF 289
++A D++TY L GV GA+ A + V A +EL F
Sbjct: 242 RDARLDKSTYVTLHGVEGARERAYQAVRLALEELEPF 278
>gi|386265885|ref|YP_005829377.1| geranyltranstransferase [Haemophilus influenzae R2846]
gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846]
Length = 296
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFNTTALRALAEFVITR 294
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 41/230 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L AS G + S + A A EM+ T +L
Sbjct: 45 GKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLPSMDNDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL Y+ + +A T + S + + I E+S A G G++ G+ +I
Sbjct: 105 VFGEAFAILAGDALLTYSFQTIAETPDEFASAETKLSLIKELSKASGAEGMVGGQAADIK 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+GK + L +L++I + GKL+E SVV G ++ S+E I+ L K+ +GLA+Q+ DD
Sbjct: 165 GEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANASQETIQALSKFAYHLGLAFQIRDD 224
Query: 245 ILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQEL 286
ILD + K G DE +TYP L+ ++GAK +E + A ++L
Sbjct: 225 ILDLEGTEEIIGKPVGSDESKDKSTYPSLLSMSGAKEALEEHIRSAKEKL 274
>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
America USA6153]
gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|376268075|ref|YP_005120787.1| geranyltranstransferase [Bacillus cereus F837/76]
gi|386738069|ref|YP_006211250.1| polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|421506438|ref|ZP_15953361.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|421638259|ref|ZP_16078855.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
gi|423550076|ref|ZP_17526403.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|364513875|gb|AEW57274.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Bacillus
cereus F837/76]
gi|384387921|gb|AFH85582.1| Polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|401189692|gb|EJQ96742.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|401823431|gb|EJT22578.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|403394685|gb|EJY91925.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
Length = 296
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 139 LLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA + MA K +S ++ VR + E++ A G G++ G++ ++ ++GK +++ EL++
Sbjct: 118 LLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEY 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DDILD ++E G
Sbjct: 178 IHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGK 237
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEA 282
++++TY L V AK E +A+A
Sbjct: 238 PIGSDVSNEKSTYTTLFTVDRAKDILDETIAKA 270
>gi|422659619|ref|ZP_16722043.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 295
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H++++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLSSRDAATR----LQMVSTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLDAAKGYALELRDQALAALSLFDT 278
Query: 292 TRAAPLYHLADFLVSR 307
T A PL LA ++V R
Sbjct: 279 T-AEPLRELARYIVER 293
>gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20]
gi|1170589|sp|P45204.1|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20]
Length = 295
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 107/182 (58%), Gaps = 17/182 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAY--FDPTRAAPLYHLADFLV 305
G D++TYPKL+G++GAK+ A++L A EL FD T A LA+F++
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKIPFDTTVRA----LAEFII 291
Query: 306 SR 307
+R
Sbjct: 292 TR 293
>gi|398969622|ref|ZP_10682972.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM30]
gi|398141759|gb|EJM30670.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM30]
Length = 295
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 117/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 --NRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A A + + + + N+ D ++ + ++ A G G++ G+ +++
Sbjct: 103 KFDEACAILAGDGLQSLAFSALLDPRLSNLDADIRLQQVTALAHAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIE SV G L G +E+D ++ L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQQALEQMHRHKTGALIEVSVKLGALASGRAEQDELKALQTYAQAIGLAFQVQD 222
Query: 244 DILD-----NMKKKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K++ D D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTETLGKRQGADIARDKPTYPALLGLDAAKVYALELRDQALHALRPFDAA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRDLARYIVER 293
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A C+++GG+ V+P ACA EM+ T +L
Sbjct: 47 GKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHK 106
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL A E M KN +R +A I+ A G G++AG+++++
Sbjct: 107 VYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLE 166
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GK V L+ + RL+ G LI+A VV ++ G +DI+KL ++ + +GLA+Q+ DD
Sbjct: 167 SEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDD 226
Query: 245 ILD------NMKKK--KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + KK +A ++++TY + G+ +K ++ +A L F +A
Sbjct: 227 ILDVEGSSEKLGKKVGSDADNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADF 285
Query: 297 LYHLADFLVSRH 308
L LA +L+ R
Sbjct: 286 LRSLAKYLLERE 297
>gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittHH]
gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittHH]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFVITR 294
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|385778739|ref|YP_005687904.1| polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|419722103|ref|ZP_14249252.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
gi|419724850|ref|ZP_14251907.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|380771739|gb|EIC05602.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|380781857|gb|EIC11506.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
Length = 298
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A C+++GG+ V+P ACA EM+ T +L
Sbjct: 47 GKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHK 106
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL A E M KN +R +A I+ A G G++AG+++++
Sbjct: 107 VYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLE 166
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GK V L+ + RL+ G LI+A VV ++ G +DI+KL ++ + +GLA+Q+ DD
Sbjct: 167 SEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDD 226
Query: 245 ILD------NMKKK--KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + KK +A ++++TY + G+ +K ++ +A L F +A
Sbjct: 227 ILDVEGSSEKLGKKVGSDADNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADF 285
Query: 297 LYHLADFLVSRH 308
L LA +L+ R
Sbjct: 286 LRSLAKYLLERE 297
>gi|407706706|ref|YP_006830291.1| hypothetical protein MC28_3470 [Bacillus thuringiensis MC28]
gi|407384391|gb|AFU14892.1| Geranyltranstransferase [Bacillus thuringiensis MC28]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ ++E EKL ++ K +GLA+Q+ DD
Sbjct: 165 AEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E + +A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEETITKA 270
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| Polyprenyl synthetase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A C+++GG+ V+P ACA EM+ T +L
Sbjct: 44 GKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHK 103
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL A E M KN +R +A I+ A G G++AG+++++
Sbjct: 104 VYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+GK V L+ + RL+ G LI+A VV ++ G +DI+KL ++ + +GLA+Q+ DD
Sbjct: 164 SEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDD 223
Query: 245 ILD------NMKKK--KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + KK +A ++++TY + G+ +K ++ +A L F +A
Sbjct: 224 ILDVEGSSEKLGKKVGSDADNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADF 282
Query: 297 LYHLADFLVSRH 308
L LA +L+ R
Sbjct: 283 LRSLAKYLLERE 294
>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 139 LLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA + MA K +S ++ VR + E++ A G G++ G++ ++ ++GK +++ EL++
Sbjct: 118 LLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMKAEGKQLTIDELEY 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DDILD ++E G
Sbjct: 178 IHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGK 237
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEA 282
++++TY L V AK E +A+A
Sbjct: 238 PIGSDVSNEKSTYTTLFTVDRAKDILDETIAKA 270
>gi|10801552|dbj|BAB16689.1| GGPP synthase [Eucommia ulmoides]
Length = 127
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
+LL +A E +AT T V DR+VR IGE++ ++G+ G++AG++++I S+G DV L L+
Sbjct: 26 SLLAFAFELIATSTTGVPADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+E SVV G ++GG ++ ++EKLRK+ +C+G
Sbjct: 86 FIHVHKTAALLEGSVVLGAILGGATDPEVEKLRKFARCIGF 126
>gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittEE]
gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
7P49H1]
gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittEE]
gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
7P49H1]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFVITR 294
>gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
Length = 309
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI 225
++ A G RG++ G+++++ S K + + +L+ I RL+ G LI AS+ G + G + +
Sbjct: 159 LTQASGQRGMVGGQLIDLESVDKPIDVQQLETIHRLKTGALIRASIAMGATLTGADRQQL 218
Query: 226 EKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKE 277
E+L YG +GLA+QV DDIL D K G D A TYP L+G+ GAK A +
Sbjct: 219 EQLDCYGDAIGLAFQVHDDILDIEADTATLGKTQGADIALNKPTYPSLLGIDGAKAKAAQ 278
Query: 278 LVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L ++ + +FD A L L+ +++SR
Sbjct: 279 LHQQSLTAIEHFDAN-ALLLRELSGYIISR 307
>gi|392546231|ref|ZP_10293368.1| geranyltranstransferase [Pseudoalteromonas rubra ATCC 29570]
Length = 295
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E ++ T +V + I ++ A G +G++ G+ +++ + K VSL+EL+
Sbjct: 116 ALQTLAFELLSAHTFSVPAANQIAMIKTLAKASGLQGMVGGQALDLAATDKSVSLAELER 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILD-----NMKK 251
I RL+ G L+ ++ G L S + +L YG+ +GLA+QV DDILD +
Sbjct: 176 IHRLKTGALLTCAIELGALCAPDVSPHTLARLHDYGQNIGLAFQVQDDILDIEGNTEVLG 235
Query: 252 KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K + D +++TYP L+G++GAK+ A+ LV EA Q L D L LAD++++R
Sbjct: 236 KPQGSDLEHNKSTYPALLGLSGAKQKAQALVEEAKQALHQIDAD-TQTLALLADYIIAR 293
>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 301
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + S ++VG + + +P+ACA EM+ + +L
Sbjct: 49 GKRLRPILVLESAQVVGKDLTRALPVACAMEMIHSYSLVHDDLPAMDDDDLRRGKPTCHK 108
Query: 136 ----------NRALLCYAVEHMAT--KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A E M + + P + + + E + AVG+ G++ G+++++
Sbjct: 109 VFGEANAILTGDALLTLAFEIMTACAELPGMEPRYVAKVVRETARAVGSLGMVGGQVLDL 168
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+GKD L + + G L A + G L+ G +E ++ L +Y + GLA+Q+ D
Sbjct: 169 ELEGKDTDFFTLKTLHSKKTGALFRACLRAGALLFGVEDERLQALTRYAENFGLAFQITD 228
Query: 244 DILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K G DE TYP L+G+ AK+ AK V EA + L F A
Sbjct: 229 DILDVEGDEKITGKPVGSDEKKQKVTYPSLLGMDEAKKLAKSSVEEAVESLNVFG-AEAD 287
Query: 296 PLYHLADFLVSR 307
L +LA +L+ R
Sbjct: 288 FLRNLALYLLHR 299
>gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047]
gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 106/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + + ++ + G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAETIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 117 ALQSFAFE-ILTKTPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|359300112|ref|ZP_09185951.1| geranyltranstransferase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305168|ref|ZP_10824227.1| polyprenyl synthetase [Haemophilus sputorum HK 2154]
gi|400376281|gb|EJP29168.1| polyprenyl synthetase [Haemophilus sputorum HK 2154]
Length = 295
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 17/161 (10%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V I +++A G +G+ G+ +++ ++ K VSL+EL+ I R + G LIE SV+ G+ +
Sbjct: 137 VAQISALATAAGAKGMCFGQSLDLIAEDKSVSLAELEQIHRNKTGALIETSVMMGLNL-S 195
Query: 220 GSEEDIE---KLRKYGKCVGLAYQVWDDILDNM----KKKKEAGDDE----ATYPKLMGV 268
S D+ +L++Y + +GLA+QV DDILD + K K+ G DE +TYPKL+G+
Sbjct: 196 QSANDMHIRIQLQRYAQAIGLAFQVQDDILDVIGETEKIGKQVGADEYLHKSTYPKLLGL 255
Query: 269 AGAKRYAKELVAEANQELAY--FDPTRAAPLYHLADFLVSR 307
GAK+ A++L +A LA FD + L LADF++ R
Sbjct: 256 EGAKQKAQDLYEQALDALAQLSFDTS---ALKALADFIIHR 293
>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
Length = 364
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 52/298 (17%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPLILQ----YPTLPNHEGERVHGTLCIASCELV 113
I+ Y++ A+ ++ AL +G P +L+ Y L G+R+ L IA+CELV
Sbjct: 68 FDIERYLSANARTVHDALDLALQGLGCPEVLRESMRYSVLAG--GKRLRPALAIAACELV 125
Query: 114 GGNESSVMPLACAAEMLVTLAL--------------------------------NRALLC 141
GG ++ +P+ACA EM+ T +L ALL
Sbjct: 126 GGPAAAAVPVACAVEMMHTASLIHDDMPCMDDDPLRRGRPSNHVAFGEPTALLSGDALLA 185
Query: 142 YAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV-SLSELDFI 198
A EH+A + V DR +RA+ E+ SA G G+ AG++ ++ S+G SL+ L++I
Sbjct: 186 LAFEHVARASAGAGVPADRALRAVLELGSAAGVGGIAAGQVADMASQGASSGSLAALEYI 245
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDD 258
+ +L+EA+ V G ++GGG + ++E++R+Y +GL QV DD+LD ++ G
Sbjct: 246 HVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLLQVVDDVLDVTATSEQLGKT 305
Query: 259 EA--------TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
TYP+LMG+ GA+ Y EL+A+A EL FD RA PL HLA F+ R
Sbjct: 306 AGKDAAAGKATYPRLMGMEGARAYMGELLAKAEAELDGFDAARAVPLLHLARFMAYRQ 363
>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 296
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 92/153 (60%), Gaps = 9/153 (5%)
Query: 139 LLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA + MA K +S ++ VR + E + A G G++ G++ ++ ++GK +++ EL++
Sbjct: 118 LLTYAFQVIMAYGQKEISAEKKVRLVLEFAKAAGPEGMVGGQVADMEAEGKQLTIDELEY 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DDILD ++E G
Sbjct: 178 IHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGK 237
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEA 282
++++TY L V AK E +A+A
Sbjct: 238 PIGSDVSNEKSTYTTLFTVDRAKDILDETIAKA 270
>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
Length = 296
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 139 LLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA + MA K +S ++ VR + E++ A G G++ G++ ++ ++GK +++ EL++
Sbjct: 118 LLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKKLTIDELEY 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + + GKL+E +V+ G ++ +EE EKL ++ K +GLA+Q+ DDILD ++E G
Sbjct: 178 IHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGK 237
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEA 282
++++TY L V AK E +A+A
Sbjct: 238 PIGSDVSNEKSTYTTLFTVDRAKDILDETIAKA 270
>gi|403380864|ref|ZP_10922921.1| polyprenyl synthetase [Paenibacillus sp. JC66]
Length = 301
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 48/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ E +GGN + +P+ACA EM+ T +L
Sbjct: 48 GKRLRPILVLAAAESLGGNREAALPIACAVEMVHTYSLIHDDLPALDNDDFRRGMPTNHK 107
Query: 136 ----------NRALLCYA--VEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A V A ++P++ + I + + G RG++ G++ ++
Sbjct: 108 VHGEAMAILAGDALLTHAFYVASDACLRSGIAPEQGLALIRDFAEFAGARGMVGGQVADM 167
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ L EL +I + G LI SV G + +EE ++ L K+G+ +G+A+Q+ D
Sbjct: 168 VGEQGITRLEELQYIHTHKTGDLIVFSVKAGGRLANANEEQMKALEKFGRSIGMAFQILD 227
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQEL--AYFD-PT 292
DILD +++ G + TYP +G+ +K+ +E Q + A+F P
Sbjct: 228 DILDITGDEQKLGKPVKSDEKQQKVTYPYFIGLEESKKLVREHTEAGKQAINQAHFPFPQ 287
Query: 293 RAAPLYHLADFLVSR 307
R L LAD+++ R
Sbjct: 288 R---LLELADYMMDR 299
>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|419820327|ref|ZP_14343938.1| geranyltranstransferase [Bacillus atrophaeus C89]
gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|388475479|gb|EIM12191.1| geranyltranstransferase [Bacillus atrophaeus C89]
Length = 296
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ + +A G +E +P+ CA EM+ T +L N
Sbjct: 45 GKRLRPVVVLAILHAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 139 LLCYAVEHMATK--------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A +A +++VS D+ +R + E+ SA GT G++ G+I ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSEDVSADKRLRLVNELISAAGTEGMVGGQIADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ K VSL EL+ I + KL+ SV+ G ++ E +IE LR + +G+ +Q+ DD
Sbjct: 165 AESKSVSLEELESIHERKTAKLLAFSVMAGAILADAPENEIETLRAFSSHIGIGFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +++ G +D++TYP L+ + GAK + + +A ++L +
Sbjct: 225 ILDLEGNEEKIGKRVGSDTTNDKSTYPSLLSLDGAKNKLADHM-KAAKDLISGLSLQKEL 283
Query: 297 LYHLADFLVSR 307
LY L D + +R
Sbjct: 284 LYDLCDLIAAR 294
>gi|398977331|ref|ZP_10687048.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
gi|398138075|gb|EJM27105.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
Length = 295
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 117/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 --NRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A A + + + + ++S D ++ + ++ A G G++ G+ +++
Sbjct: 103 KFDEACAILAGDGLQSLAFSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIE SV G L G +E D ++ L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQKALEQMHRHKTGALIEVSVKLGALASGRAERDELKSLQTYAQAIGLAFQVQD 222
Query: 244 DILD-----NMKKKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K++ D D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTETLGKRQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRDLARYIVDR 293
>gi|402698241|ref|ZP_10846220.1| geranyltranstransferase [Pseudomonas fragi A22]
Length = 295
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 82/142 (57%), Gaps = 10/142 (7%)
Query: 175 VLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG-GSEEDIEKLRKYGK 233
++ G+ +++ S G + + L+F+ R + G LIEASV G L G S +D++ L Y +
Sbjct: 153 MVGGQAIDLGSVGIKLDQTALEFMHRHKTGALIEASVQLGALASGHASADDLQALNLYAR 212
Query: 234 CVGLAYQVWDDILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQE 285
VGLA+QV DDILD K++ D D+ TYP LMG+ GAK YA EL +A
Sbjct: 213 AVGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALMGLDGAKAYALELRDQALNA 272
Query: 286 LAYFDPTRAAPLYHLADFLVSR 307
L FD T A PL LA ++V R
Sbjct: 273 LQSFDTT-ADPLRALARYIVER 293
>gi|373467318|ref|ZP_09558617.1| putative geranyltranstransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371758853|gb|EHO47609.1| putative geranyltranstransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 296
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E M TKT N+S ++ + + ++ G +G+ G+ +++ S+ K +SLS+L+
Sbjct: 117 ALQSFAFE-MLTKTPNISSEQKLALVKILAQGSGVQGMCLGQSLDLISEHKQISLSKLEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSAET 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
Length = 314
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 140/319 (43%), Gaps = 71/319 (22%)
Query: 56 NPFPEIQIDEYMTLKAKKINKALFEGAAVPLIL----QYPTLPNHEGERVHGTLCIASCE 111
NP+ ++++ TL +++++A A P L +Y L G+R+ L + S +
Sbjct: 2 NPYSSY-VEQFQTLIKEELDRAAQFTADCPDRLSEASRYSLLAG--GKRLRPLLVLLSAQ 58
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
G +P A A EM+ T +L L
Sbjct: 59 ACSGKPEPGLPAALAIEMVHTYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILAGDGL 118
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAG---------RIMEINSKGKD- 189
L A E +A V P VR + E+S A G G++ G R +I SK +
Sbjct: 119 LTRAFETLAAGI--VDPATAVRCVLELSRASGVEGMVGGQQADLDAEKRFEQIESKSSEE 176
Query: 190 -----------VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLA 238
L +L I R + GKLI +V G ++GG + ++ + +YG +GLA
Sbjct: 177 TAENPAEPSDEAELQQLKAIHRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLA 236
Query: 239 YQVWDDILD------NMKK--KKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
+QV DDILD M K K+AG D+ TYP L+G+ ++ +A+ LV EA + ++
Sbjct: 237 FQVMDDILDCTSTVEAMGKGVGKDAGRDKLTYPGLLGLQASREHAESLVHEAQEAISELG 296
Query: 291 PTRAAPLYHLADFLVSRHK 309
P A L +A ++++R +
Sbjct: 297 PP-ADGLRAVATYIITRDR 314
>gi|440720697|ref|ZP_20901109.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|440727848|ref|ZP_20908074.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|443641335|ref|ZP_21125185.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
gi|440363253|gb|ELQ00423.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|440365067|gb|ELQ02181.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|443281352|gb|ELS40357.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
Length = 295
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + ++ A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTTLAIAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRQLARYIVER 293
>gi|398983680|ref|ZP_10690144.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
gi|399012337|ref|ZP_10714661.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398115899|gb|EJM05672.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398156852|gb|EJM45264.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
Length = 295
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 --NRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A A + + + + + S D ++ + ++ A G G++ G+ +++
Sbjct: 103 KFDEACAILAGDGLQSLAFSALLDPRLSDCSSDIRLQMVTALAQAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + + L+ + R + G LIE SV G L G +E+D + L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQNALEQMHRHKTGALIEVSVKLGALASGRAEQDELRALQTYAQAIGLAFQVQD 222
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K++ A D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTATLGKRQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|402298061|ref|ZP_10817785.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
gi|401726705|gb|EJS99921.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
Length = 293
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 42/215 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + + + LACA EM+ T +L
Sbjct: 45 GKRIRPLLLLATLKGFDKSFETGYELACAIEMIHTYSLIHDDLPAMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL ++ E +A+ ++P+++VR I E++ A G G++ G++ ++
Sbjct: 105 VFGEATAILAGDALLTHSFERIASS--QLAPEKVVRLIKELAIAAGPVGMIGGQVADMEG 162
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ + ++L EL +I + G L+ S+V G +I SEED+E+LR + + +GL +Q+ DD+
Sbjct: 163 EERALTLEELTYIHNHKTGDLLTYSIVAGAIIADASEEDVERLRHFARELGLLFQIKDDL 222
Query: 246 LDNMKKKK--------EAGDDEATYPKLMGVAGAK 272
LD +++ + G++++TYP L+G+ K
Sbjct: 223 LDVEGEQELIGKPLGSDVGNNKSTYPSLLGLNETK 257
>gi|312143726|ref|YP_003995172.1| polyprenyl synthetase [Halanaerobium hydrogeniformans]
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium hydrogeniformans]
Length = 294
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL YA E ++ + P + ++ I I+S G G++ G+ ++I+++ K++SL+E+
Sbjct: 118 ALLTYAFEILSEL--ELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQK 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKK 253
I + G LI+ASV+ GV S + E L+KY + +G+ +QV DD+L D K K
Sbjct: 176 IHAAKTGALIKASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGK 235
Query: 254 EAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ G D+ +TYPKL+GV GA+ A E +A LA F+ A PL L D+++SR
Sbjct: 236 KVGSDQKLDKSTYPKLLGVDGAREAAVEYAKKAKNSLAIFEE-EAEPLIKLVDYVLSRQ 293
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 58/301 (19%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCE 111
++ I+ YM A+ ++ L +++P Q P + G+R+ L +A+ E
Sbjct: 5 QLSIEAYMKEIAEAVSTRL--SSSLPAAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAAE 62
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
+GG+ + MP+ACA EM+ T +L L
Sbjct: 63 ALGGSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDGL 122
Query: 140 LCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
L +A + A++ + V + + + E+S G G++ G++ ++ + L +L +
Sbjct: 123 LTHAFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLRY 182
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + G LI SV G I G+ E +E L +YG+ +G A+Q+ DDILD + + + G
Sbjct: 183 IHEHKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESKLGK 242
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQEL---AYFDPTRAAPLYHLADFLVS 306
+ TYP +G+ ++ + L +EA Q L A +P R L +AD L+
Sbjct: 243 KTQSDVIQQKVTYPYFIGIEASRAEVERLTSEAKQALQNGAIPNPQR---LLEIADLLLR 299
Query: 307 R 307
R
Sbjct: 300 R 300
>gi|384208042|ref|YP_005593762.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
gi|343385692|gb|AEM21182.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
Length = 294
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 145/298 (48%), Gaps = 57/298 (19%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM ++ ++INK + F+ +++ L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNIRLEEINKTIDNVFDKSSIELENSFIEMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGN-ESSVMPLACAAEMLVTLAL--------------------------------NRA 138
L G+ + S++P A A E++ T +L
Sbjct: 59 LFNGDYKKSIIP-AVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHIKYGEANAILVGDG 117
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
LL +A + + +KT +V L + + E+S A G G++ G+ +++ + K+++ L +
Sbjct: 118 LLTHAFQ-LLSKT-DVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKIL 175
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKE 254
+ G +I ++ G I ++ DIE + KYG+ +GLA+Q+ DDIL DN K
Sbjct: 176 HAKKTGAMIRGAIRLGA-IASENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKT 234
Query: 255 AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELA-YFDPTRAAPLYHLADFLVSR 307
G DE TY K G+ GAK AK+++ ++ + L Y D L LA++++ R
Sbjct: 235 VGKDEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKDSEAKNILIELANYIIER 292
>gi|425744588|ref|ZP_18862643.1| polyprenyl synthetase [Acinetobacter baumannii WC-323]
gi|425490184|gb|EKU56484.1| polyprenyl synthetase [Acinetobacter baumannii WC-323]
Length = 305
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 12/150 (8%)
Query: 169 AVGTRGVLAGRIMEINSKG--KDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDI 225
A + ++ G+++++ ++G K V+ +EL+ I R + G LI+A+++ G V I G+++ I
Sbjct: 155 ATASSKMVCGQVLDLQAEGAGKQVNQAELENIHRNKTGALIQAAIMMGAVTIFAGTDQAI 214
Query: 226 EKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKE 277
KLR++G+ +GLA+QV DDILD K AG DE +TYP LMG+ A+ YA+
Sbjct: 215 PKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQTQKSTYPALMGLEQAQAYAQS 274
Query: 278 LVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L +A LAYF A L ++ FL++R
Sbjct: 275 LHDQAFDALAYFGDD-AKELVDISKFLLAR 303
>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 57/297 (19%)
Query: 63 IDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPN---HEGERVHGTLCIASCELVGGN 116
I Y L ++N AL F+ L Y + + G+RV L A+CE +GG
Sbjct: 2 IASYQALSQTRVNAALESLFQAPGPELARLYDAMRYSVMNGGKRVRPLLAYAACEALGGE 61
Query: 117 ESSVMPLACAAEMLVTLAL-------------------------------------NRAL 139
ACA E++ +L + A
Sbjct: 62 ARDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
H+ ++ ++ + +++A G G++ G+ +++ S G + + L+++
Sbjct: 122 TALLAPHLTSRDAETR----LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH 177
Query: 200 RLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWDDILD------NMKKK 252
R + G LIEASV G L G +++ ++ L+ Y + VGLA+QV DDILD + K+
Sbjct: 178 RHKTGALIEASVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGKR 237
Query: 253 KEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ A D+ TYP L+G+ AK YA EL A L F P A PL LA ++V R
Sbjct: 238 QGADIARDKPTYPALLGLDAAKSYALELRDMALDALNPFGPA-AEPLRDLARYIVER 293
>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
Length = 295
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 --NRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A A + + + + ++S D ++ + ++ A G G++ G+ +++
Sbjct: 103 KFDEACAILAGDGLQSLAFSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIE SV G L G +E+D ++ L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQKALEQMHRHKTGALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQD 222
Query: 244 DILD-----NMKKKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K++ D D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTETLGKRQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRDLARYIVDR 293
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 45/262 (17%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML----------------- 130
++Y TL G+RV L A+ EL G ++ + CA EM+
Sbjct: 39 MRYATLGG--GKRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLPCMDDDV 96
Query: 131 ---------------VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
L + +L A E +A++ P + + I ++ A G+RG+
Sbjct: 97 LRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQPLG-EPKQQLEIIALLAHASGSRGM 155
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKC 234
G+ +++ S GK ++ EL+ + L+ G LI A+V+ G L G S ++ L ++ K
Sbjct: 156 AGGQAIDLASVGKPLTQPELELMHALKTGALIRAAVLLGALAGQPLSADERTSLDRFAKR 215
Query: 235 VGLAYQVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQEL 286
GL +QV DDILD K AG DEA TY L+G+ A+ YA EL A+A L
Sbjct: 216 AGLLFQVVDDILDCTASTATLGKTAGKDEAADKPTYVALLGLDAARTYADELRADARDAL 275
Query: 287 AYFDPTRAAPLYHLADFLVSRH 308
+ F RA+ L LADF+ R
Sbjct: 276 SIFG-ERASRLNQLADFICHRQ 296
>gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
Length = 303
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 32/218 (14%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C + G ++++ A + L TLA +++ A T+ DRL I E++
Sbjct: 101 TCHIKFGEATAIL----AGDALQTLA-------FSILADAPMTQVSDRDRLAM-ISELAQ 148
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEK 227
A G G+ G+ ++ ++G V+L+ L+ I R + G LI A+V G L G + D +
Sbjct: 149 ASGVAGMCGGQAFDLEAEGHQVNLAALERIHRHKTGALIRAAVRLGALAAGDAGRDALPY 208
Query: 228 LRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMGVAGAKRYAKELV 279
L +Y +GLA+QV DDILD + K++ D + +TYP L+G+ A++ A+EL
Sbjct: 209 LDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLGLDNARKKAQELY 268
Query: 280 AEANQELAYFD--------PTRAAPLYHLADFLVSRHK 309
E+ LA D P APL LA+F+V R K
Sbjct: 269 QES---LASLDDLVASSPIPLNIAPLQALANFIVERDK 303
>gi|334137118|ref|ZP_08510563.1| geranyltranstransferase [Paenibacillus sp. HGF7]
gi|333605316|gb|EGL16685.1| geranyltranstransferase [Paenibacillus sp. HGF7]
Length = 300
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 51/299 (17%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--------GERVHGTLCIASCE 111
++ I EY+ AK++ L E P + P + G+R+ L +A+ E
Sbjct: 4 DMNIQEYIASYAKEVEGELRE--LFPRLWDIPDVLRQSAQYSIDAGGKRLRPILVLAAAE 61
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
+GG + + MP+ACA EM+ T +L AL
Sbjct: 62 ALGGRKEAAMPVACAIEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDAL 121
Query: 140 LCYAVEHMATKTKNVSP-DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
L A + ++ P ++++ + E++ G RG++ G++ ++ + LS L++I
Sbjct: 122 LTQAFYSASQARRHGVPAEQVLNIVEELAEYSGARGMVGGQVADMKGEQGITELSGLEYI 181
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKE 254
+ + LI S+ G I G ++ +E L +G+ +GLA+Q+ DDILD K K
Sbjct: 182 HQHKTSDLIIFSLRAGGRIAGADDKQLEALTAFGRSIGLAFQIQDDILDVTGTQEKLGKA 241
Query: 255 AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
G DE TYP +G+ ++R L EA +A + L LAD+L+ R +
Sbjct: 242 VGSDEKQQKVTYPFFIGMEESERRVALLTDEAKTAIAGGVLPKPQRLLELADYLMKRDR 300
>gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
Length = 296
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TKT N+S ++ + I ++ G +G+ G+ +++ S+ K +SL+EL+
Sbjct: 117 ALQSFAFE-ILTKTPNISSEQKLALIKILAQGAGAQGMCLGQSLDLISEHKQISLNELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++ +E+ L +Y + +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSAEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G++GAK+ A++L A EL P L LA+F+++R
Sbjct: 236 GKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI-PFDTTALRALAEFIITR 294
>gi|421074462|ref|ZP_15535494.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
gi|392527503|gb|EIW50597.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
Length = 292
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + +GG S + +AC EM+ T +L
Sbjct: 43 GKRLRPILLMAAADSIGGKGSDYLNVACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL A M + V D L++ +GEIS+A G G++ G++++++S
Sbjct: 103 VFGEGMAILAGDGLLTAAFTVMLAQ-PGVQADVLIKVVGEISNAAGALGMIGGQVIDLSS 161
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ + + L ++ + + G L +A+V G + GG E + L +Y K GLA+Q+ DDI
Sbjct: 162 EGEKIDIDTLSYMHQAKTGALFKAAVRAGAQLAGGEEWQVASLTEYAKQYGLAFQITDDI 221
Query: 246 LD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYF 289
LD K K G D +ATY L + A+ A + V A Q L F
Sbjct: 222 LDVTGTQEKIGKPVGSDVKNHKATYVTLYSLGEAQDMADQAVTNALQALKQF 273
>gi|422651839|ref|ZP_16714630.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 295
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H++++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLSSRDAETR----LQMVSTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLDAAKGYALELRDQALAALSLFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVER 293
>gi|418963281|ref|ZP_13515120.1| polyprenyl synthetase [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383343396|gb|EID21580.1| polyprenyl synthetase [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 300
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%), Gaps = 15/141 (10%)
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE 222
I E+S A GT G++ G+++++ +GKD+SL+EL I + GKL+ + LI E
Sbjct: 135 IAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQTIHANKTGKLLTYPFIAAGLIAEVGE 194
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILD------NMKK--KKEAGDDEATYPKLMGVAGAKRY 274
EKL+ G+ +GLA+QV DDILD ++ K +K+ ++ATYP ++G+ GAKR+
Sbjct: 195 SQQEKLKVIGQLLGLAFQVRDDILDITANFEDLGKTPQKDVAAEKATYPAILGLDGAKRF 254
Query: 275 AKE-------LVAEANQELAY 288
+E L+AE ELA+
Sbjct: 255 FEEQLEATEHLLAEVEAELAF 275
>gi|398311372|ref|ZP_10514846.1| geranyltranstransferase [Bacillus mojavensis RO-H-1]
Length = 296
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 47/288 (16%)
Query: 66 YMTLKAKKINKALF---EGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNESSV 120
++ + K + + LF E +P L+ L + E G+R+ + +A G +E
Sbjct: 8 FLAERKKAVEEQLFVYTENLNIPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDG 67
Query: 121 MPLACAAEMLVTLAL------------------------NRALLCYAVEHMATKT----- 151
+P+ CA EM+ T +L A A + + T++
Sbjct: 68 IPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLIT 127
Query: 152 ----KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLI 207
VS ++ +R + E+ SA GT G++ G+I ++ ++ + V+L EL+ I + KL+
Sbjct: 128 SHVSDEVSAEKRLRLVNELISAAGTEGMVGGQIADMEAENRQVTLEELESIHERKTAKLL 187
Query: 208 EASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDD----E 259
V+ G ++ EE+IE LR + +G+ +Q+ DDILD K K G D +
Sbjct: 188 GFGVIAGAILADAPEEEIETLRAFSSHIGIGFQIRDDILDVEGSEEKIGKRVGSDTTNEK 247
Query: 260 ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+TYP L+ + GAK+ + EA + + + LY L D + +R
Sbjct: 248 STYPSLLSLEGAKKKLDGHIEEAKRLIGGLSLQKDL-LYELCDLIAAR 294
>gi|410460635|ref|ZP_11314310.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
gi|409926893|gb|EKN64045.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
Length = 275
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 56/260 (21%)
Query: 95 NHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------- 135
N G+R+ L A+ G +E + +ACA EM+ T +L
Sbjct: 23 NAGGKRLRPILLFATLHAFGKDEKLGIDVACALEMIHTYSLIHDDLPSMDDDDLRRGKPT 82
Query: 136 -------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
LL ++ E +A K+K +S I ++ A G G++ G++ +
Sbjct: 83 NHKVYGEAVAILAGDGLLTHSFEIIA-KSKELSDTLKANIIAFLAQAAGPSGMVGGQVAD 141
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ + KD+++ EL++I + GKL+ +VV G +I G S++ E L ++ + +GLA+Q+
Sbjct: 142 LLGEQKDLNVEELEYIHEHKTGKLLRFAVVAGAIIAGASKDQQECLDQFARHLGLAFQIK 201
Query: 243 DDILD---NMKK-----KKEAGDDEATYPKLMGVAGAKR-------YAKELVAEANQELA 287
DDILD ++K+ + G D++TYPKL+ + GAK AKE + +AN E
Sbjct: 202 DDILDIEGDVKQIGKPVGSDVGKDKSTYPKLLTLEGAKNKCNDHLTSAKEWLEKANVE-- 259
Query: 288 YFDPTRAAPLYHLADFLVSR 307
+ L +AD++V+R
Sbjct: 260 ------SDLLLEIADYIVNR 273
>gi|188996777|ref|YP_001931028.1| polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 287
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 16/178 (8%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL +A E + + K +S +++V+ I +S VG G++ G+ +I KDV +F
Sbjct: 116 GLLTFAFE-LISNNKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKDV-----EF 169
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + K + A G ++ +EE+I KL+ YG +GLA+Q+WDDILD + +++ G
Sbjct: 170 IHLNKTAKFLSACCQIGCVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEKTGK 229
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ TYP L G+ + + AK+ V +A E+ D + L LAD+++SR
Sbjct: 230 RLHKDKDKNKITYPSLYGLEKSIQIAKDYVEKAKNEIK--DLKNSEFLIKLADYIISR 285
>gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
Length = 300
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 16/182 (8%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TK+ +S ++ +R I +S G G+ G+ +++ S+ K +SLSEL+
Sbjct: 121 ALQAFAFE-ILTKSTALSAEQKLRLIQVLSHNSGVFGMCLGQSLDLISEHKQISLSELEQ 179
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILD-------- 247
I R + G L+ A++ G + ++ KL +Y +GLA+QV DDILD
Sbjct: 180 IHRNKTGALLSAALKMGFICSSHFADNALEAKLDRYAAAIGLAFQVQDDILDIEGDLAAI 239
Query: 248 --NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
N+ E+ D++TYPKL+G+AGAK+ A+EL A EL + P L LA+F++
Sbjct: 240 GKNVGSDLES--DKSTYPKLLGLAGAKQKARELYVAAVGELEHL-PFDTTALRALAEFII 296
Query: 306 SR 307
+R
Sbjct: 297 NR 298
>gi|404401538|ref|ZP_10993122.1| geranyltranstransferase [Pseudomonas fuscovaginae UPB0736]
Length = 295
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 49/294 (16%)
Query: 63 IDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPN---HEGERVHGTLCIASCELVGGN 116
I Y K++N AL F + L Y + + G+RV L A+CE +GG
Sbjct: 2 IKTYQAASQKRVNAALDTLFVAPSAGLARLYEAMRYSVMNGGKRVRPLLVYAACEALGGK 61
Query: 117 ESSVMPLACAAEMLVTL------------------------ALNRALLCYAVEHMAT--- 149
ACA E++ A + A A + + +
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 150 ------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
+ ++S + + + ++ A G G++ G+ +++ S G + L+ + R +
Sbjct: 122 SALLDPRLSDLSAEIRLSMVSTLAQAAGPAGMVGGQAIDLGSVGLKLDQKALETMHRHKT 181
Query: 204 GKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA- 255
G LIEASV G L +++D ++ L+ Y + +GLA+QV DDILD + K++ A
Sbjct: 182 GALIEASVTLGALASADAQKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 256 -GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYP L+G+ AK YA EL +A L FD A PL LA ++V R
Sbjct: 242 IARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERR 294
>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
gi|212673609|gb|EEB34092.1| polyprenyl synthetase [Desulfovibrio piger ATCC 29098]
Length = 298
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 121/251 (48%), Gaps = 43/251 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC++ L G V+P A A EM+ T +L
Sbjct: 48 GKRLRPVLCLSCAALCGLKAEDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHK 107
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A HM + +++RA+ E + A G+ G++ G+ ++
Sbjct: 108 AFDEATAILAGDALLTDAFAHMCRV--ELPAGQVLRAMAEFARAAGSSGMVGGQEWDMLY 165
Query: 186 KG-KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
G VS++EL + ++ G L+ AS VCG L+ G +++ E++ +YG +G+A+Q+ DD
Sbjct: 166 TGLPPVSMAELRRMHAMKTGALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADD 225
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + K AG D + TYP L+G+ ++R A+E A LA F+ A
Sbjct: 226 ILDVVSDTATLGKPAGSDAEQGKNTYPALVGLDESRRLAREQADAACAALAGFNGPEAEF 285
Query: 297 LYHLADFLVSR 307
L LA++ ++R
Sbjct: 286 LRALAEYTITR 296
>gi|297805334|ref|XP_002870551.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
lyrata]
gi|297316387|gb|EFH46810.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
lyrata]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 88/152 (57%), Gaps = 19/152 (12%)
Query: 172 TRGVLAGRIMEINSKG---KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
T+G++AG++ +++S+ D L L+ I + L+E + + GV++G G+EE+IEKL
Sbjct: 24 TKGLVAGQVTDLSSERLNPHDAGLERLELIHLHKTAALLEEAAILGVIMGDGTEEEIEKL 83
Query: 229 RKYGKCVGLAYQVWDDILDNMKKKKEAGDD----------------EATYPKLMGVAGAK 272
RKY +C+ L +QV DDILD + ++ G + TYP+L+G+ ++
Sbjct: 84 RKYARCIRLLFQVVDDILDVTESTEDLGKTVGKDLRATTMVALMAGKLTYPRLIGLERSR 143
Query: 273 RYAKELVAEANQELAYFDPTRAAPLYHLADFL 304
A++L EA ++L F +AAPL LA ++
Sbjct: 144 AVAEKLNREAEEQLLRFHRNKAAPLMALASYI 175
>gi|422646392|ref|ZP_16709525.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 295
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 57/297 (19%)
Query: 63 IDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPN---HEGERVHGTLCIASCELVGGN 116
I Y ++N AL F+ + L Y + + G+RV L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 117 ESSVMPLACAAEMLVTLAL-------------------------------------NRAL 139
ACA E++ +L + A
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
H++++ ++ + +++A G G++ G+ +++ S G + + L+++
Sbjct: 122 TALLAPHLSSRDAETR----LQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMH 177
Query: 200 RLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWDDILD------NMKKK 252
R + G LIEASV G L G +++ + L+ Y + +GLA+QV DDILD + K+
Sbjct: 178 RHKTGALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGKR 237
Query: 253 KEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ A D+ TYP L+G+ AK YA EL +A LA F P +A PL LA ++V R
Sbjct: 238 QGADIARDKPTYPALIGLQAAKGYALELRDQALGALADFGP-QAEPLRELARYIVER 293
>gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 303
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 13/184 (7%)
Query: 138 ALLCYAVEHMATKTK-NVSPDRLVR---AIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
AL+ YA E A+ + ++ PD L R A+G ++ G G++ G+ +++ G +
Sbjct: 121 ALMMYAFETAASAFETSIDPDELSRIGKAMGILARKTGVYGMIGGQTVDVELAGGPIPKD 180
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
+LDFI RL+ G LIEAS++ G ++GG ++ED + + + +G+A+Q+ DDILD ++
Sbjct: 181 KLDFIYRLKTGALIEASMLIGAVLGGAADEDCKIVESLARKIGMAFQIQDDILDVTGSEE 240
Query: 254 EAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
G + + TY L G+ AK+ +++ AEA +EL P L L L+
Sbjct: 241 VIGKPVNSDEKNKKTTYVTLEGLDKAKKDVEQISAEAIEELNKL-PGNNEFLEQLIHVLI 299
Query: 306 SRHK 309
+R K
Sbjct: 300 NRQK 303
>gi|12231184|dbj|BAB20976.1| putative GGPP synthase [Sonchus oleraceus]
Length = 126
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 138 ALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELD 196
ALL ++ EH+A TK VS DR++RAIGE++ +G+ G++AG++++I S+G DV L L+
Sbjct: 26 ALLSFSFEHIAYMATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLDHLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLR 229
FI + L+E SVV G ++GGGS+E+IEKL+
Sbjct: 86 FIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLQ 118
>gi|357051954|ref|ZP_09113072.1| hypothetical protein HMPREF9467_00044 [Clostridium clostridioforme
2_1_49FAA]
gi|355387222|gb|EHG34248.1| hypothetical protein HMPREF9467_00044 [Clostridium clostridioforme
2_1_49FAA]
Length = 303
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 100/184 (54%), Gaps = 13/184 (7%)
Query: 138 ALLCYAVEHMATKTK-NVSPD---RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
AL+ +A E A + +++PD R+ RA+G ++ G G++ G+ +++ G +
Sbjct: 121 ALMMFAFETAANAFETSIAPDELSRIGRAMGILAHKTGVYGMIGGQTVDVELAGGPIPGD 180
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK- 252
+LD I RL+ G LIEAS++ G ++GG +EED + + +G+A+Q+ DDILD +
Sbjct: 181 KLDIIYRLKTGALIEASMLIGAVLGGAAEEDCKIVESLASKIGMAFQIQDDILDVTGSQD 240
Query: 253 ---KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
K +G DE TY L G+ AK+ +++ EA +EL P L HL LV
Sbjct: 241 VTGKPSGSDEKNKKTTYVTLEGLEKAKKDVEQISTEAIEELNKL-PGNNEFLEHLIRALV 299
Query: 306 SRHK 309
R K
Sbjct: 300 GRQK 303
>gi|423395520|ref|ZP_17372721.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|423406396|ref|ZP_17383545.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
gi|401654931|gb|EJS72470.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|401660390|gb|EJS77872.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
Length = 296
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYDQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++GK +++ EL++I + + GKL+E +V+ G ++ +EE E+L + K +GLA+Q+ DD
Sbjct: 165 AEGKRLTIDELEYIHKHKTGKLLEYAVLAGAILSDATEEQEEQLLVFAKNIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK +E +A+A
Sbjct: 225 ILDVEGNEEEIGKPIGSDVSNEKSTYTTLFTVDRAKAILEETIAKA 270
>gi|409397083|ref|ZP_11248026.1| geranyltranstransferase [Pseudomonas sp. Chol1]
gi|409118585|gb|EKM94984.1| geranyltranstransferase [Pseudomonas sp. Chol1]
Length = 296
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 113/253 (44%), Gaps = 45/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+ ++ ACA E++ +L
Sbjct: 44 GKRVRPLLVYAACEALRGDRATADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVR--AIGEISSAVGTRGVLAGRIMEI 183
L A E MA N PD +R ++ A G G++ G+ +++
Sbjct: 104 AFDEACAILAGDGLQSLAFEAMAEARHN-PPDAALRLRMFAVLARAAGPAGMVGGQAIDL 162
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVW 242
S G + L+ + R + G LIEASV G L G ++ D + L Y + +GLA+QV
Sbjct: 163 GSVGLKLDREALELMHRHKTGALIEASVQLGALASGHADADSLGALSHYARAIGLAFQVQ 222
Query: 243 DDILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD K + D D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DDILDVESDTATLGKHQGADIARDKPTYPALLGLDAAKAYAIELRDQALHALRPFD-IAA 281
Query: 295 APLYHLADFLVSR 307
PL LA F+V R
Sbjct: 282 EPLRDLARFIVER 294
>gi|389682316|ref|ZP_10173658.1| isopentenyl-diphosphate delta-isomerase/geranyltranstransferase
[Pseudomonas chlororaphis O6]
gi|388553759|gb|EIM17010.1| isopentenyl-diphosphate delta-isomerase/geranyltranstransferase
[Pseudomonas chlororaphis O6]
Length = 471
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 92/162 (56%), Gaps = 9/162 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
V+ +R +GE++ AVG+ G+ G++++I S G+ + L+ L+ + R++ G LI A++
Sbjct: 309 VAAERQALLMGELAMAVGSLGMAGGQMIDIGSVGQALDLTRLEQMHRMKTGALIRAALRM 368
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK--------KEAGDDEATYPKL 265
G L G+ D+E L +Y +GLAYQV DDILD K+A D + Y +
Sbjct: 369 GALCAEGAPFDLEPLDRYAAAIGLAYQVVDDILDATTDTATLGKTAGKDAQDHKPNYVSI 428
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+G+ ++R ++L A+Q L RA L+ LAD +++R
Sbjct: 429 LGLEPSRRLVRQLDERAHQALEPL-AERAEHLHELADLVINR 469
>gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 297
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + + ++++ + VR I ++ A G RG+ G+ +++ ++ K V+L+EL+
Sbjct: 118 ALQSFAFE-LIVQDESLTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI ASV+ G + S+ K L +Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALIIASVLMGFNLSVHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GA++ A++L A L P L LA F+V R
Sbjct: 237 GKTVGSDENLHKSTYPKLLGLEGAQQKAQDLYQTALNALEEL-PFDTTALKELAHFIVKR 295
>gi|397906448|ref|ZP_10507248.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
gi|397160405|emb|CCJ34585.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
Length = 291
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 43/251 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LCIA CE + GN V+ +AC+ EM+ T +L
Sbjct: 43 GKRIRPILCIAVCEALEGNLEDVLDIACSIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA E + K + R V A EI+ A G G++ G++++I +
Sbjct: 103 VYGDAIAILAGDGLLNYAFETLLKVIKRKNDKRFVDAAFEIAKASGITGMIGGQVIDITN 162
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
G + + L + + GKLIEAS G +I E +E R+Y K +G+A+Q+ DDI
Sbjct: 163 VGNIIDENLLVSMHERKTGKLIEASCNVGAIIANRYEY-LEITREYSKNLGVAFQIVDDI 221
Query: 246 LDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + +K+ G +++ TY L G+ ++ AKE +A + D T L
Sbjct: 222 LDVIGDEKKLGKSVGKDAKNNKPTYVTLYGLEKSRELAKEFSLKAVELANKIDNT--GFL 279
Query: 298 YHLADFLVSRH 308
L +L++R
Sbjct: 280 KDLTKYLLNRE 290
>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 300
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 42/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+ EL+GG V+P+A A EM+ T +L
Sbjct: 49 GKRLRPVLCMAAAELLGGRSDLVLPMALALEMVHTASLIHDDLPAMDDDVLRRGQPTNHV 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSP-DRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALLC A E T+ + P +V+A+ + ++G G+ G+++++
Sbjct: 109 VYGEALAILAGDALLCQAFELPLTELPSEIPRGNVVKAVAHFARSIGPGGICGGQVLDME 168
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+G + S I L+ LI S++ G ++ GGS ED+E L YG +G+A+Q+ DD
Sbjct: 169 SEGSEEECSSPTEISTLKTAALIRTSLITGAILSGGSAEDLEALESYGLELGVAFQIADD 228
Query: 245 ILDNMKKKKE----AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD ++E G DEA T+ +G+ GA R KE A L F + +A
Sbjct: 229 ILDVKGDQEELGKSLGKDEAHGKRTFVSDLGMEGAMRRLKERTERAISSLDRFGES-SAF 287
Query: 297 LYHLADFLVSRHK 309
L LA +L R +
Sbjct: 288 LRELALYLEHRTR 300
>gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP]
Length = 308
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 94/158 (59%), Gaps = 11/158 (6%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V+ I +S+A G +G+ G+ +++ ++ K ++L+EL+ I R + G LI ASV+ V +
Sbjct: 150 VQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTELEQIHRHKTGALIVASVLMAVNLSD 209
Query: 220 GSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KKKKEAGDDE----ATYPKLMGVA 269
++ + K L +Y + +GLA+QV DDILD + K K G D+ +TYPKL+G+
Sbjct: 210 HAQNNAIKQPLERYAQAIGLAFQVQDDILDVIGQTDKIGKTVGADQQLHKSTYPKLLGLT 269
Query: 270 GAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
AK+ A++L A LA P ++ L LADF++ R
Sbjct: 270 QAKQKAQDLHQTALNALAEL-PFKSTALKELADFIIHR 306
>gi|392426568|ref|YP_006467562.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
gi|391356531|gb|AFM42230.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
Length = 291
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA E +A P++ +R I E+++A G G++ G++++I + K +SL+E++
Sbjct: 114 GLLTYAFEFLADPILG-QPEKQLRVIREVAAAAGKNGMVGGQVLDIAGEEKKLSLTEIEE 172
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----K 253
I + + G L+ AS G ++ GGSEE IE L Y + +GLA+Q+ DDILD + K
Sbjct: 173 IHKAKTGALLIASARLGGILAGGSEEQIEALTNYAQALGLAFQIKDDILDVIGDSETLGK 232
Query: 254 EAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
AG D ++TY L+G+ AK A L F+
Sbjct: 233 PAGSDLRQGKSTYVSLLGLEEAKHQLHAQTQRAQSALKLFE 273
>gi|404368532|ref|ZP_10973882.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
gi|313687827|gb|EFS24662.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
+ + ALL +A + K K++ ++++ + SS G G++ G++++I S+GK + L
Sbjct: 110 ILIGDALLTHAFYILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDL 169
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DN 248
L +I + GKL++ V +IG +E+ E L K+ +GLA+Q+ DDIL D
Sbjct: 170 ETLKYIHSNKTGKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDF 229
Query: 249 MKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELA-YFDPTRAAPLYHLADF 303
K G D ++TYP L+G+A +K KE +AEA +A F ++ L LAD+
Sbjct: 230 STLGKPVGSDIELGKSTYPALIGMAESKALLKETIAEAKTIVAEKFGVEKSNILLELADY 289
Query: 304 LVSRHK 309
+ +R+K
Sbjct: 290 IGNRNK 295
>gi|340756656|ref|ZP_08693261.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
Length = 295
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
+ + ALL +A + K K++ +++V + SS G G++ G++++I S+GK + L
Sbjct: 110 ILIGDALLTHAFYILTEKNKHLPAEKIVEIVRLTSSYAGINGMIGGQMVDIASEGKKIDL 169
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DN 248
L ++ + GKL++ V +IG E+ E L K+ + +GLA+Q+ DDIL D
Sbjct: 170 ETLKYMHSNKTGKLMKLPVELACIIGDADREEREVLVKFSELIGLAFQIKDDILDIEGDF 229
Query: 249 MKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELA-YFDPTRAAPLYHLADF 303
K G D ++TYP L+G+A +K KE +AEA +A F ++ L LAD+
Sbjct: 230 STLGKPVGSDIELGKSTYPSLIGMAESKTLLKETIAEAKMIVAEKFGVEKSNILLELADY 289
Query: 304 LVSRHK 309
+ +R+K
Sbjct: 290 IGNRNK 295
>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
Length = 296
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 45/255 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + + L GG + P A EM+ T +L
Sbjct: 44 GKRLRPMLMMETYRLFGGETEVIYPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHI 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPD---RLVRAIGEISSAVGTRGVLAGRIME 182
ALL YA E A K P+ R+ +A+ ++ G G++ G++++
Sbjct: 104 VYGEDMGILAGDALLNYAFE-TACKAFEQFPEESLRIGQAMRVLARKAGIYGMIGGQVVD 162
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ G + LDFI RL+ G LIE++++ G ++ G S+ED++ ++K +G+A+Q+
Sbjct: 163 VKESGHQIDEEVLDFIFRLKTGALIESAMMIGAILAGASKEDVKSMQKIAGKIGMAFQIQ 222
Query: 243 DDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD ++ G +++ TY L G+ A + + + EA EL F P
Sbjct: 223 DDILDVTSTTEQLGKPVHSDEKNEKTTYVTLKGIEQAHKDVERMTEEAIDELKKF-PAGD 281
Query: 295 APLYHLADFLVSRHK 309
L L LV R K
Sbjct: 282 NFLEQLLKSLVYREK 296
>gi|336323530|ref|YP_004603497.1| polyprenyl synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107111|gb|AEI14929.1| Polyprenyl synthetase [Flexistipes sinusarabici DSM 4947]
Length = 299
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 47/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +S + + V+P A A EML T +L
Sbjct: 47 GKRLRPVLIYSSYGIFDNDFDKVVPYAAAVEMLHTYSLIHDDLPAMDDDDYRRGNPTNHK 106
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVR--AIGEISSAVGTRGVLAGRIMEI 183
ALL A E M N + +R A +++ A G RG++AG+ +++
Sbjct: 107 MFGEATAILAGDALLTKAFEVMLDPVINPETEEKLRCEAALKLAKAGGDRGMIAGQFVDV 166
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+ + +LDFI + L+ G ++G G EED E+L+++G +GLA+Q+ D
Sbjct: 167 ESENSYFTAEKLDFIHNYKTAALLGYCTELGTVLGYGGEEDKERLKRFGINIGLAFQIVD 226
Query: 244 DILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
D+LD + K+AG D +ATYP L GV +K+ A+ L+ E+ +A D AA
Sbjct: 227 DLLDISATTEQLGKDAGSDLKKGKATYPGLYGVDESKKKARALIDES---VALVDCYGAA 283
Query: 296 --PLYHLADFLVSRH 308
PL +A F++ R+
Sbjct: 284 SRPLAEIARFVIDRN 298
>gi|302879474|ref|YP_003848038.1| polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 156 PDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGV 215
P + + I ++SA G+RG+ G+ ++++S GK ++L EL+ + + G LI A+V+ G
Sbjct: 137 PQQQMAMIRLLASASGSRGMAGGQAIDLDSVGKSLTLPELENMHIHKTGALIRAAVLLGA 196
Query: 216 LIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMG 267
G S + L Y KCVGLA+QV DD+LD K+A +D+ TY L+G
Sbjct: 197 QCGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTATLGKTAGKDADNDKPTYVTLLG 256
Query: 268 VAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
V A+ A L EA + LA F A L LADF+V R
Sbjct: 257 VTAAREMANNLHREALESLAEFGDA-AQRLRELADFIVLR 295
>gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
29799]
gi|150273035|gb|EDN00192.1| polyprenyl synthetase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 312
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +C + GG+ ++ +P ACA EM+ T +L
Sbjct: 62 GKRIRPVLALETCRMCGGDVTTALPFACAVEMVHTYSLIHDDLPCMDDDDLRRGQPTNHK 121
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E +A ++SP+R + A + A G RG++ G+ +++
Sbjct: 122 VYGEATAVLAGDALLTAAFETIAEHGTSLSPERALAASACLGRAAGARGMVGGQALDMAG 181
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G +SLSEL+ ++RL+ G LI A+ G ++ GG E++ +R+Y + +GLA+Q+ DD+
Sbjct: 182 EGHSLSLSELEELQRLKTGALISAATEIGCIVAGGGEKERAAVRRYAQLLGLAFQIRDDM 241
Query: 246 LD------NMKK--KKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL-AYFDPTRAAP 296
LD + K +A +++ T+ L G+ ++ E A + L + F+ A
Sbjct: 242 LDVEGDEATLGKPIGSDAANEKVTFVSLKGMEACEKLVSEKTEAAKEALCSTFED--AGF 299
Query: 297 LYHLADFLVSRHK 309
L LAD LV R K
Sbjct: 300 LCWLADKLVKREK 312
>gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 297
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A + ++++ + VR I ++ A G RG+ G+ +++ ++ V+L+EL+
Sbjct: 118 ALQSFAFELIA-QDESLTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI ASV+ G + S+ K L +Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GA++ A++L A L P L LA F+V R
Sbjct: 237 GKTVGSDENLHKSTYPKLLGLEGAQQKAQDLYQTALNALEEL-PFDTTALKELAHFIVKR 295
>gi|425901813|ref|ZP_18878404.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397893029|gb|EJL09505.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 295
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL------------------------ 133
G+RV L A+CE +G ACA E++
Sbjct: 43 GKRVRPLLAYAACEALGARPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 134 ALNRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + A A + + + + + S + ++ + ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFSALLDPRLSDSSAEIRLQMVSTLALAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+++ R + G LIEASV G L G +E+D ++ L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQKALEYMHRHKTGALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQD 222
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K++ A D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAG-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 121/251 (48%), Gaps = 43/251 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+A+ E VGG + ACA EM+ +L
Sbjct: 49 GKRIRPALCLAAAEAVGGQRQIALAPACALEMIHAYSLMHDDLPAMDNDDLRRGRATAHI 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL A +AT + +S + + + +++A G G++ G+ +++ S
Sbjct: 109 AFDESSAILAGDALQAEAFRVLATAPR-LSAEVKLAMVKALANACGANGMVGGQAIDLES 167
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDD 244
+ ++L +L+ + R + G LIEASV G L GG + ++ L +Y + +GLA+QV DD
Sbjct: 168 VARTLTLDQLENMHRHKTGALIEASVHLGALAGGVKDPALLDALARYARALGLAFQVQDD 227
Query: 245 IL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+L D K G D A TYP L+G GA+ L+AEA++ L +A
Sbjct: 228 LLDIEGDTEVMGKTQGSDIARGKPTYPALLGPKGARELLARLLAEAHESLKGL-GIQADA 286
Query: 297 LYHLADFLVSR 307
L+ +AD++V+R
Sbjct: 287 LHAMADYIVAR 297
>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|402776690|ref|YP_006630634.1| geranyltranstransferase [Bacillus subtilis QB928]
gi|418032399|ref|ZP_12670882.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|428279913|ref|YP_005561648.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|430759106|ref|YP_007209030.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915229|ref|ZP_21963855.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
gi|251757288|sp|P54383.2|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|351471262|gb|EHA31383.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481870|gb|AFQ58379.1| Geranyltranstransferase [Bacillus subtilis QB928]
gi|407959673|dbj|BAM52913.1| geranyltranstransferase [Bacillus subtilis BEST7613]
gi|407965248|dbj|BAM58487.1| geranyltranstransferase [Bacillus subtilis BEST7003]
gi|430023626|gb|AGA24232.1| Geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115577|gb|EME05973.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
Length = 296
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ + +A G +E +P+ CA EM+ T +L
Sbjct: 45 GKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 --NRALLCYAVEHMATKT---------KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A A + + T++ VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ + V+L EL+ I + KL+ V+ G ++ EEDIE LR + +G+ +Q+ DD
Sbjct: 165 AENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +++ G +D++TYP L+ + GAK + EA + + +
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL- 283
Query: 297 LYHLADFLVSR 307
LY L D + +R
Sbjct: 284 LYELCDLIAAR 294
>gi|422590457|ref|ZP_16665112.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 295
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H++++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLSSRDAETR----LQMVSTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVWLGALASGQADQARLDALQVYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLDAAKGYALELRDQALAALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVER 293
>gi|424925133|ref|ZP_18348494.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas fluorescens
R124]
gi|404306293|gb|EJZ60255.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas fluorescens
R124]
Length = 295
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 --NRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A A + + + + ++ D ++ + ++ A G G++ G+ +++
Sbjct: 103 KFDEACAILAGDGLQSLAFSALLDPRLSSLDADIRLQQVTALAHAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIE SV G L G +E+D ++ L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQQALEQMHRHKTGALIEVSVKLGALASGRAEQDQLKALQTYAQAIGLAFQVQD 222
Query: 244 DILD-----NMKKKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K++ D D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTETLGKRQGADIARDKPTYPALLGLDAAKVYALELRDQALHALRPFDAA-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRDLARYIVER 293
>gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 303
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 153 NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV 212
N++ ++ +R + ++ A G +G++ G+ ++I G D++L EL + ++ G LI AS+
Sbjct: 140 NLTAEQKIRMVKVLAEAAGLKGMVGGQYIDIQVTGADITLDELQAMHSMKTGALIRASLA 199
Query: 213 CGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPK 264
G + +EE + L +YG +GLA+QV DDILD + K+A ++ TY K
Sbjct: 200 LGGIAANATEEQLAALDEYGTHIGLAFQVADDILDVEGDAETLGKTQGKDAEANKPTYVK 259
Query: 265 LMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
L+G+ GAK A+ L+ A + L+ F + A L LA ++V R +
Sbjct: 260 LLGLEGAKAEAQRLLKAALEALSDFGES-ADHLRDLARYIVERDR 303
>gi|452992580|emb|CCQ96007.1| Polyprenyl synthetase [Clostridium ultunense Esp]
Length = 289
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 44/244 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + SCE++GG +P A A EM+ T +L
Sbjct: 44 GKRLRPILLLKSCEMLGGEHKRSIPFAMAIEMIHTYSLIHDDLPSMDDDDFRRGRLTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSP-----DRLVRAIGEISSAVGTRGVLAGRI 180
LL A E M T S R + AI EI G G++ G++
Sbjct: 104 VYGEAIAVLSGDGLLNLAFEIMVDFTLKNSKTIEDYKRNIWAIDEIGKYSGIYGMIGGQV 163
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQ 240
+++ S + +L F+ + + LI+AS+V G ++GGG +EDIE++R++G +GLAYQ
Sbjct: 164 VDLLSNEIAMDEDKLLFMYKSKTAALIQASLVAGAILGGGCKEDIERMRRFGLYLGLAYQ 223
Query: 241 VWDDILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL--- 297
+ DDILD ++ ++ TY + AK EL +A L Y++
Sbjct: 224 IRDDILD---VNEDKSINKVTYLSFNNIDVAKDKVDELSKKAIDVLDYYENKDVEFFKKL 280
Query: 298 -YHL 300
YHL
Sbjct: 281 TYHL 284
>gi|407692512|ref|YP_006817301.1| geranyltranstransferase [Actinobacillus suis H91-0380]
gi|407388569|gb|AFU19062.1| geranyltranstransferase [Actinobacillus suis H91-0380]
Length = 297
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A + ++++ + V I ++ A G RG+ G+ +++ ++ K V+L+EL+
Sbjct: 118 ALQSFAFELIA-QDESLTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI ASV+ G + S+ K L +Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALIVASVLMGFNLSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GA++ A++L A L P + L LA F+V R
Sbjct: 237 GKTVGSDENLHKSTYPKLLGLEGAQKKAQDLYQTALNALEEL-PFDTSALKELAHFIVKR 295
>gi|374367607|ref|ZP_09625668.1| geranyltranstransferase [Cupriavidus basilensis OR16]
gi|373100910|gb|EHP41970.1| geranyltranstransferase [Cupriavidus basilensis OR16]
Length = 306
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 9/156 (5%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
+R + E++ A G+ G+ G+ +++ G +SL EL+ + R++ G L+ ASV G G
Sbjct: 150 MRLVAELARASGSVGMAGGQAIDLQHVGLAMSLEELEGMHRMKTGALLRASVRMGAYCGA 209
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMGVAGA 271
E + L +Y VGLA+QV DDILD K+A +D+ TY LMG+ A
Sbjct: 210 VDEAGLAALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDAANDKPTYVSLMGLEPA 269
Query: 272 KRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ A++L A A++ LA F RA L LAD +V R
Sbjct: 270 RQLAQQLRATAHEALAVFG-ARARRLGELADLIVLR 304
>gi|304312212|ref|YP_003811810.1| polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 115/252 (45%), Gaps = 44/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ E G + S ACA EML + +L
Sbjct: 46 GKRLRPVLAFAAAEACGTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHI 105
Query: 136 ----------NRALLCYAVEHMATKT--KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
AL C A E +A+ +P +L I ++ A GT G+ G+ +++
Sbjct: 106 AFDEATAILAGDALQCLAFEVLASSELPSMTTPIKL-EMIRSLAVASGTHGMAGGQALDL 164
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ GK + L L+ I RL+ G LI A+V G L E + L +Y +GLAYQV D
Sbjct: 165 AASGKLLDLHGLETIHRLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQD 224
Query: 244 DILDNMKK-----KKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD K++ D D+ATYP+++G+ A+ A L +A Q + F A
Sbjct: 225 DILDVTGDTLTLGKQQGADAVLDKATYPRILGLQAAQALATHLHDQALQAIQGFGDG-AT 283
Query: 296 PLYHLADFLVSR 307
PL LA ++V+R
Sbjct: 284 PLRALASYIVNR 295
>gi|417853151|ref|ZP_12498573.1| hypothetical protein GEW_03277 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338215434|gb|EGP01711.1| hypothetical protein GEW_03277 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 295
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ + ++ + + +S A G +G+ G+ +++ S+ K +SL EL+
Sbjct: 116 ALQAFAFE-ILTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILD-----NMK 250
I R + G ++ A++ G + + D ++LR+Y + +GLA+QV DDILD ++
Sbjct: 175 IHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQLRRYSEAIGLAFQVQDDILDIEGESDII 234
Query: 251 KKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K D D++TYPKL+G+AGAK+ A+EL A EL P + L +A+F+V+R
Sbjct: 235 GKTVGSDLLADKSTYPKLLGLAGAKQKAQELYQSAIAELESI-PFDTSALRAIAEFVVNR 293
>gi|402833960|ref|ZP_10882567.1| geranyltranstransferase [Selenomonas sp. CM52]
gi|402279029|gb|EJU28072.1| geranyltranstransferase [Selenomonas sp. CM52]
Length = 295
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VG + ++ + CA EM+ T +L
Sbjct: 46 GKRLRPVLLMAAADAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E M + + +P+ LV + E+S A G G++ G+++++
Sbjct: 106 VFGDGIAVLAGDALLTLAFEVM-LRQEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEG 164
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ + L+ L I + G L A++ G ++ G EE++ L Y + GLA+Q+ DDI
Sbjct: 165 EGRRLDLAALRKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDI 224
Query: 246 LDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + G +++ATY L + AK+ A++ V EA L F RAA L
Sbjct: 225 LDVTGDEAAIGKPVGSDVRNEKATYVTLTSLEEAKKLAEDAVNEAVAALDIFGE-RAAFL 283
Query: 298 YHLADFLVSRHK 309
LA FL+ R K
Sbjct: 284 RDLALFLLRRKK 295
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 155 SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG 214
SP +R + ++ A G+RG+ G+ +++ + GK ++L EL+F+ + G LI ASV+ G
Sbjct: 138 SPQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILG 197
Query: 215 VLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDD----EATYPKL 265
G + +D+++L + K +GLA+QV DD+LD K AG D + TY
Sbjct: 198 ANCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGKDARQGKPTYVST 257
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+GV A+ A+EL EA + LA F RA L LA+++VSR
Sbjct: 258 VGVEAARAMAQELKREAVESLAPFG-ERARRLRELAEYIVSR 298
>gi|422296714|ref|ZP_16384379.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
gi|407992059|gb|EKG33764.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
Length = 295
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 51/256 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H++++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLSSRDAETR----LQMVSTLAAAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP 291
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLDAAKGYALELRDQALAALSPFDA 278
Query: 292 TRAAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 279 A-AEPLRELARYIVER 293
>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 16/187 (8%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
L + AL A +A T + ++ + ++ A +RG+ G+ +++ S G+ ++L
Sbjct: 112 LLVGDALQSLAFRILADSTSGLPASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTL 171
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDIL----D 247
+EL+ + RL+ G LI ASV+ G + +E L ++ +C+GLA+Q+ DD+L D
Sbjct: 172 AELETMHRLKTGALIRASVLLGAWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESD 231
Query: 248 NMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH---L 300
K G D A TYP L+G+ AK A+ L+ +A+Q L D AP H L
Sbjct: 232 TATLGKPQGSDRARDKPTYPSLLGLPQAKAKAQSLLEQAHQALRAVD----APTEHLEWL 287
Query: 301 ADFLVSR 307
ADF+V R
Sbjct: 288 ADFVVQR 294
>gi|384915972|ref|ZP_10016175.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
gi|384526670|emb|CCG92046.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
Length = 299
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 70/317 (22%)
Query: 43 DQAENLTIKSNNNNPFPEIQIDEYMTLKAKK-------INKALFEGAAVPLILQYPTLPN 95
D+A + E + +Y+T K+KK I+ +LF G
Sbjct: 3 DKAMEIEAYIAKQQGIIESALRKYVTDKSKKPRILHEAIDYSLFSG-------------- 48
Query: 96 HEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------- 135
G+R+ LC+A V +P+ACA E + T +L
Sbjct: 49 --GKRLRPILCLAGAHTVCMATDCALPMACAVECIHTYSLIHDDLPSMDNDDFRRGKPSL 106
Query: 136 ------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A E + + S L I E++ A G+R ++AG++ ++
Sbjct: 107 HKIYGEAMAILTGDALLALAFEIASLCSPLGSSYPLSTMIWELARAAGSRALVAGQVADL 166
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S+GK++ L++L +I + LI ++ G + E+ + + KYG+ +GLA+Q+ D
Sbjct: 167 ESEGKEIGLTQLRYIHCRKTAALITVALRLGAMSANADEKTLRLITKYGRSLGLAFQIID 226
Query: 244 DILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPT--- 292
DILD + K AG D+ ATYP++MG+ Y+K+ A Q+ Y+
Sbjct: 227 DILDVTQTTEILGKSAGKDQKAKKATYPRIMGL----EYSKKAAAYYTQKSLYYASALGE 282
Query: 293 RAAPLYHLADFLVSRHK 309
L LA++L++R +
Sbjct: 283 NGKLLSELANYLLARKR 299
>gi|442805670|ref|YP_007373819.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741520|gb|AGC69209.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 298
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 46/288 (15%)
Query: 63 IDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMP 122
+D+Y+ ++N+ + E V + Y + G+R+ L +A +++ G+ VMP
Sbjct: 14 VDDYLVKYFDRLNREVPEKRLVE-SMSYSVMAG--GKRIRPVLMLAVTKMLSGDPQEVMP 70
Query: 123 LACAAEMLVTLAL--------------------------------NRALLCYAVEHMATK 150
A A EM+ T +L ALL A +
Sbjct: 71 FAAAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALLNEAFSLLFEA 130
Query: 151 TKNVSP--DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIE 208
+ N + V+A I+ A G G++AG+++++ S+G VS ++L + R + G LI
Sbjct: 131 SANAGDKMEHWVKASCIIARAAGRDGMIAGQVIDMESEGTQVSATKLKTMHRKKTGALIT 190
Query: 209 ASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDDE----A 260
ASV+ + G SE+ I+ L +Y + +G+A+Q+ DDILD +E G DE
Sbjct: 191 ASVIVPAVFLGLSEDKIKALTEYAENIGIAFQIRDDILDVEGTIEELGKPVGSDERNRKT 250
Query: 261 TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
TY L G+ GAK +E+ +A + L F RA L +A ++ R
Sbjct: 251 TYVSLYGLDGAKEMLREVTRKAVESLDVFGE-RAWFLKEIAYYIAERR 297
>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 296
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ + +A G +E +P+ CA EM+ T +L N
Sbjct: 45 GKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 139 LLCYAVEHMATK--------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A +A + VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ + V+L EL+ I + KL+ V+ G ++ EEDIE LR + +G+ +Q+ DD
Sbjct: 165 AENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDD 224
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K K G D ++TYP L+ + GAK + EA + + +
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL- 283
Query: 297 LYHLADFLVSR 307
LY L D + +R
Sbjct: 284 LYELCDLIAAR 294
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VG + ++ + CA EM+ T +L
Sbjct: 46 GKRLRPVLLMAAADAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHK 105
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E M + + +P+ LV + E+S A G G++ G+++++
Sbjct: 106 VFGDGIAVLAGDALLTLAFEVM-LRQEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEG 164
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G+ + L+ L I + G L A++ G ++ G EE++ L Y + GLA+Q+ DDI
Sbjct: 165 EGRRLDLAALRKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDI 224
Query: 246 LDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + G +++ATY L + AK+ A++ V EA L F RAA L
Sbjct: 225 LDVTGDEAAIGKPVGSDVRNEKATYVTLTSLEEAKKLAEDAVDEAVVALDIFGE-RAAFL 283
Query: 298 YHLADFLVSRHK 309
LA FL+ R K
Sbjct: 284 RDLALFLLGRKK 295
>gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
gi|452744962|ref|ZP_21944801.1| geranyltranstransferase [Mannheimia haemolytica serotype 6 str.
H23]
gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
gi|452087017|gb|EME03401.1| geranyltranstransferase [Mannheimia haemolytica serotype 6 str.
H23]
Length = 297
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +AT +++V+ + E+++A G +G+ G+ +++ ++ K VSL EL+
Sbjct: 118 ALQSFAFELLATDPHLTDREKVVQ-VTELATASGAKGMCLGQSLDLIAENKAVSLEELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI +SV+ G+ + S+ K L Y K +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GAK+ A+ L A L P L LA+F+V R
Sbjct: 237 GKIVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALHSLEQL-PFDTTALKELANFIVKR 295
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VG E V+P ACA E++ T +L
Sbjct: 43 GKRLRPALTLAAAQAVGAPERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHR 102
Query: 136 ----------NRALLCYAVEHMA--TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
AL A E +A + ++ +R++ + E+++A GT G++ G+ +++
Sbjct: 103 VFGEAVALLAGSALFALAFEVLAGCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDV 162
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
S + VS +EL+ + R + G L A+V G ++GG S +E+L + + GLA+Q+ D
Sbjct: 163 VSVSRTVSEAELEAVHRAKTGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITD 222
Query: 244 DILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD ++ G + + TY + G+ A+R E A A L F P A
Sbjct: 223 DILDVTGYAEQTGKAVGSDARNRKHTYVSVCGLEAARRRGAESSAAALAALEEFGP-EAD 281
Query: 296 PLYHLADFLVSR 307
L A+F+VSR
Sbjct: 282 FLRQAAEFIVSR 293
>gi|406878658|gb|EKD27503.1| hypothetical protein ACD_79C00693G0001, partial [uncultured
bacterium]
Length = 246
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 42/244 (17%)
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
LC+ S EL +V+ ACA E+L T L
Sbjct: 4 LCLLSAELFAEPSQNVINCACALELLHTYTLIHDDLPCMDNDDFRRGKPTCHKAFPESIA 63
Query: 136 ---NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
ALL + +A TKN P++ +R I +++ G++GV+ G++++I ++ K ++
Sbjct: 64 LLAGDALLTLCFQIIADNTKNC-PEKGIRIISDLAELTGSKGVIGGQVLDIINENKPITP 122
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM--- 249
EL I + KLI ASV G ++ +E ++E + KYG +G A+Q+ DDILD +
Sbjct: 123 EELSEIHINKTAKLISASVRMGAILMNAAESELEMITKYGLLIGEAFQIADDILDEIGDS 182
Query: 250 -KKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFL 304
K K G D ++T+PK G+ +K+ + + A L F +A L +A F+
Sbjct: 183 AKLGKNTGQDLKLNKSTFPKFFGIDKSKQILFDKINSAVACLNQFG-KKAESLNQIAHFI 241
Query: 305 VSRH 308
+R
Sbjct: 242 GTRE 245
>gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
Length = 294
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 95 NHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------------- 135
N G+R+ L +AS E+ G VM A A EM+ T +L
Sbjct: 42 NAGGKRLRPILILASYEVYGKTLDKVMSSAVAIEMIHTYSLIHDDLPAMDDDDYRRGKLT 101
Query: 136 -------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIME 182
ALL Y+ + + + ++ D V I +S A G G++AG+I++
Sbjct: 102 NHKQFNEATAILAGDALLTYSFQ-LISSDDLLTSDEKVELIRILSEASGPAGMVAGQILD 160
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ ++ + V+L E++ I L+ G+LI +++ G +GG ++ ++ L Y +GL +QV
Sbjct: 161 MEAEKQAVTLEEMEEIHALKTGELIRFAIIAGAYLGGATDNQLKHLTDYAYYLGLIFQVQ 220
Query: 243 DDIL----DNMKKKKEAGDDE----ATYPKLMGVAGA 271
DDIL D K K G DE +TYPKL+G+ GA
Sbjct: 221 DDILDITGDASKIGKPVGSDELNEKSTYPKLLGLQGA 257
>gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1]
gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter sp. ADP1]
Length = 302
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCG-VLIGGGSEEDIEK 227
A + ++ G+++++ ++GK++ +L+ I R + G LI+A+++ G V + G ++ I
Sbjct: 154 ATASSKMVCGQVLDLQAEGKEIDQEQLENIHRNKTGALIQAALMMGAVTLFSGMDQAIPH 213
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD + K AG D+ +TYP LMG+ A+ YAK L
Sbjct: 214 LRQFGQRIGLAFQVQDDILDIISSTETLGKTAGKDQQVQKSTYPALMGLDAAQNYAKNLH 273
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A L YF A L + FL+SR
Sbjct: 274 DQALASLDYFGDA-AIELQQIVQFLLSR 300
>gi|358451415|ref|ZP_09161849.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224648|gb|EHJ03179.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
Length = 298
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 88/154 (57%), Gaps = 10/154 (6%)
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-S 221
+ E++ A G G++ G+ +++ S GK ++L++L+ + R + G LIE SV G L
Sbjct: 144 VRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVD 203
Query: 222 EEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA----TYPKLMGVAGAKR 273
E+ + L +Y K +GLA+QV DD+LD K G D A TYP L+G+ GA+
Sbjct: 204 EQALASLTQYAKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPALLGLEGARE 263
Query: 274 YAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ L+ +A Q L F P A PL +AD++V+R
Sbjct: 264 HLANLLEQAQQSLQAFGP-EADPLRAMADYVVAR 296
>gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
Length = 302
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV-CGVLIGGGSEEDIEK 227
A + ++ G+++++ S+GK + L+ I R + G LI A+++ V I G++ I K
Sbjct: 154 ATASSKMVNGQVLDLQSEGKKIDQQALETIHRNKTGALISAAIMMAAVTIFDGTDLAIPK 213
Query: 228 LRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELV 279
LR++G+ +GLA+QV DDILD + K AG DE +TYP LMG+ AK YA++L
Sbjct: 214 LREFGQAIGLAFQVQDDILDIISDTDVLGKTAGKDEQVEKSTYPALMGLEQAKAYAQQLH 273
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
+A L +F+ +A L + FL++R
Sbjct: 274 DQAINALNHFEG-QAEELMQITQFLLTR 300
>gi|345870699|ref|ZP_08822650.1| Geranyltranstransferase [Thiorhodococcus drewsii AZ1]
gi|343921512|gb|EGV32228.1| Geranyltranstransferase [Thiorhodococcus drewsii AZ1]
Length = 297
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 149 TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIE 208
++ ++ + V + ++ A G RG++ G+ M++ ++GK + ++ L+ I + G LI
Sbjct: 129 SEAPGIAAENRVLMVEALARASGARGMVGGQAMDLAAEGKPLDVAMLEHIHIHKTGALIR 188
Query: 209 ASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGDDE---- 259
ASV G+L G + D ++L +Y KC+GLA+Q+ DD+L D + K AG D+
Sbjct: 189 ASVQMGMLAHGSLDPDHSQRLDRYAKCLGLAFQIQDDVLDVEGDTAEIGKTAGRDQALNK 248
Query: 260 ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
ATYP L+G+ AK A L+AEA + F P A PL +A L+ R
Sbjct: 249 ATYPSLVGLTEAKEMAANLIAEALSAIEIF-PAGADPLRWIAGGLLGR 295
>gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
Length = 296
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 108/181 (59%), Gaps = 12/181 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+T ++S ++ + + +++A G +G+ G+ +++ S+ + ++LS L+
Sbjct: 117 ALQPFAFE-LLTQTPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEK 175
Query: 198 IKRLRCGKLIEASVVCGVLIG--GGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKK 251
I R + G L+ A+V G + + + E+L Y VGLA+QV DDILD ++
Sbjct: 176 IHRNKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGESIVI 235
Query: 252 KKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG D ++TYPKL+G+ GAK+ A+EL +A QEL P + L+ LA+F+V+R
Sbjct: 236 GKTAGSDLLADKSTYPKLIGLDGAKQKARELYHQALQELDAL-PFDTSALHALAEFVVNR 294
Query: 308 H 308
Sbjct: 295 Q 295
>gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336]
gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336]
Length = 296
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 108/181 (59%), Gaps = 12/181 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+T ++S ++ + + +++A G +G+ G+ +++ S+ + ++LS L+
Sbjct: 117 ALQPFAFE-LLTQTPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEK 175
Query: 198 IKRLRCGKLIEASVVCGVLIG--GGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKK 251
I R + G L+ A+V G + + + E+L Y VGLA+QV DDILD ++
Sbjct: 176 IHRNKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGESIVI 235
Query: 252 KKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG D ++TYPKL+G+ GAK+ A+EL +A QEL P + L+ LA+F+V+R
Sbjct: 236 GKTAGSDLLADKSTYPKLIGLDGAKQKAQELYHQALQELDAL-PFDTSALHALAEFVVNR 294
Query: 308 H 308
Sbjct: 295 Q 295
>gi|385330322|ref|YP_005884273.1| geranyltranstransferase [Marinobacter adhaerens HP15]
gi|311693472|gb|ADP96345.1| geranyltranstransferase [Marinobacter adhaerens HP15]
Length = 298
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 88/154 (57%), Gaps = 10/154 (6%)
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-S 221
+ E++ A G G++ G+ +++ S GK ++L++L+ + R + G LIE SV G L
Sbjct: 144 VRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVD 203
Query: 222 EEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDEA----TYPKLMGVAGAKR 273
E+ + L +Y K +GLA+QV DD+LD K G D A TYP L+G+ GA+
Sbjct: 204 EQALASLTQYAKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPALLGLEGARE 263
Query: 274 YAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ L+ +A Q L F P A PL +AD++V+R
Sbjct: 264 HLANLLEQAQQSLQAFGP-EADPLRAMADYVVAR 296
>gi|430748056|ref|YP_007207185.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
gi|430019776|gb|AGA31490.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
Length = 340
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 45/232 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ + E G + S+ +P ACA E++ T +L
Sbjct: 91 GKRLRPILCLLAAEACGADPSAALPAACALELVHTYSLIHDDLPAMDDDDLRRGRPTCHK 150
Query: 136 ----------NRALLCYAVEHMATKTKNVSP-DRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL A E +A ++V P + V + ++ G G++ G++ ++
Sbjct: 151 AFDEATAVLAGDGLLTLAFEILA---QHVRPAEAAVACVQALAEGAGPSGMVGGQMADLE 207
Query: 185 SKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++G+ D SL L+ I R + G L+ AS+ G L+ G E + L YG VGLA+Q+ D
Sbjct: 208 AEGRNDPSLEALESIHRRKTGALLRASLRMGGLVAGADETSLHALNIYGGAVGLAFQIID 267
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELA 287
D+L D K K G D TYP L+G+ G+++ AK+L EA LA
Sbjct: 268 DLLDVQGDETKLGKRVGKDSGLGKWTYPGLLGIEGSRQRAKQLADEAVAALA 319
>gi|13383247|dbj|BAB39474.1| putative GGPP synthase 3 [Metaplexis japonica]
Length = 127
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG-KDVSLSELD 196
ALL +A EH+ T TK S ++LVR I E++ +G+ G++AG++++I S+G DV L L+
Sbjct: 26 ALLAFAFEHIVTATKGASSEQLVRVIEELAKCIGSEGLVAGQVVDICSEGISDVGLEHLE 85
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
FI + L+E SVV G ++GG ++ I KLRK+ +C+GL
Sbjct: 86 FIHLHKTAALLEGSVVLGAILGGANDVQISKLRKFARCIGL 126
>gi|398304512|ref|ZP_10508098.1| geranyltranstransferase [Bacillus vallismortis DV1-F-3]
Length = 296
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ + +A G NE +P+ CA EM+ T +L N
Sbjct: 45 GKRLRPLIVLAVLNAYGKNEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 139 LLCYAVEHMATK--------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A +A + VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ + V+L EL+ I + KL+ V G ++ EEDIE LR + +G+ +Q+ DD
Sbjct: 165 AENRQVTLEELESIHERKTAKLLGFCVTAGAILADAPEEDIETLRTFSSHIGIGFQIRDD 224
Query: 245 ILD----NMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K K G D ++TYP L+ + GAK + EA + ++ +
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVHINEAKRLISGLSLQKEL- 283
Query: 297 LYHLADFLVSR 307
L+ L D + +R
Sbjct: 284 LFELCDLIAAR 294
>gi|438002488|ref|YP_007272231.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
gi|432179282|emb|CCP26255.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
Length = 286
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 58/268 (21%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
+ Y TL G+R+ + + + EL G + V+P AC EM+ T +L
Sbjct: 27 MHYSTLSG--GKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMDNDD 84
Query: 136 --------------------NRALLCYAVEHMA--TKTKNVSPDRLVRAIGEISSAVGTR 173
ALL +A +A +K ++PD +V I ++S A G
Sbjct: 85 FRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVSLAAGGY 144
Query: 174 GVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGK 233
G++ G+ ++I + GKDVS L +I + G L+ S G + G S+ED+E ++ +G+
Sbjct: 145 GMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETIKCFGE 204
Query: 234 CVGLAYQVWDDILD--------------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELV 279
+GL +Q+ DDILD +MK KK T+ L G + L
Sbjct: 205 KLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKN------TFVNLFGFNKSVEIVNNLS 258
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
EA Q ++ ++ L DF+ R
Sbjct: 259 LEAKQLISNYNNNDF--FIQLTDFISKR 284
>gi|398852079|ref|ZP_10608748.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
gi|398244955|gb|EJN30487.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
Length = 295
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 --NRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A A + + + + + S D ++ + ++ A G G++ G+ +++
Sbjct: 103 KFDEACAILAGDGLQSLAFSALLDPRLSDCSSDIRLQMVTALAQAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIE SV G L G +E D + L+ Y + +GLA+QV D
Sbjct: 163 SVGLKLDQKALEQMHRHKTGALIEVSVKLGALASGRAEPDELRALQTYAQAIGLAFQVQD 222
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K++ A D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DILDVESDTATLGKRQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AE 281
Query: 296 PLYHLADFLVSRH 308
PL LA ++V R
Sbjct: 282 PLRELARYIVERR 294
>gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 297
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +AT ++ V + E+++A G +G+ G+ +++ ++ K VSL EL+
Sbjct: 118 ALQSFAFELLATDPHLTDREK-VAQVTELATASGAKGMCLGQSLDLIAENKAVSLEELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI +SV+ G+ + S+ K L Y K +GLA+QV DDILD + K
Sbjct: 177 IHRNKTGALILSSVMMGLNLSEHSQNLAIKQPLVNYAKAIGLAFQVQDDILDVIGDTDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GAK+ A+ L A L P L LA+F+V R
Sbjct: 237 GKTVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALHSLEQL-PFDTTALKELANFIVKR 295
>gi|429124140|ref|ZP_19184672.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
gi|426279870|gb|EKV56889.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
Length = 294
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 57/298 (19%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM + ++INK + FE + + L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNARLEEINKTIDNVFEKSNIELENSFIEMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGN-ESSVMPLACAAEMLVTLAL--------------------------------NRA 138
L G+ + S++P A + E++ T +L
Sbjct: 59 LFEGDYKKSIIP-AVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDG 117
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
LL YA + + +KT +V L + + E+S A G G++ G+ +++ + K+++ L +
Sbjct: 118 LLTYAFQ-LLSKT-DVKDSTLRKLLFELSYAAGVNGMVMGQFIDLYYEEKEINFDMLKVL 175
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKE 254
+ G +I +V G I ++ DIE + KY + VGLA+Q+ DDIL DN K
Sbjct: 176 HAKKTGAMIRGAVRLGA-ISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKT 234
Query: 255 AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELA-YFDPTRAAPLYHLADFLVSR 307
G DE TY K G+ GAK+ AK++ +A + L Y D L LA++++ R
Sbjct: 235 VGKDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYIIER 292
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 40/251 (15%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+C V G+ ++ + ACA E++ +L
Sbjct: 76 GKRLRPLLVMAACAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHV 135
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
AL A E + +V R ++ A G +G+ G+ +++ S
Sbjct: 136 QYGEAQALLAGDALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLAS 195
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
G ++ ++L + RL+ G L++ASV+ G G S + LR YG +GLA+QV DDI
Sbjct: 196 VGLPLTSAQLHEMHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDI 255
Query: 246 LD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD K+A D+ T+ LMG+ ++ YA++L A+A L L
Sbjct: 256 LDVTADAATLGKTAGKDAAQDKPTFVSLMGLQASRAYAQQLHAQALASLRASGLENTQAL 315
Query: 298 YHLADFLVSRH 308
LAD LV+R
Sbjct: 316 QALADMLVNRQ 326
>gi|421490515|ref|ZP_15937887.1| putative geranyltranstransferase [Streptococcus anginosus SK1138]
gi|400373005|gb|EJP25940.1| putative geranyltranstransferase [Streptococcus anginosus SK1138]
Length = 300
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 15/144 (10%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V I E+S A GT G++ G+++++ +GKD+SL EL I + GKL+ V LI
Sbjct: 132 VNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLVELQNIHANKTGKLLTYPFVAAGLIAE 191
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILD---NMKK-----KKEAGDDEATYPKLMGVAGA 271
E EKL+ G+ +GLA+QV DDILD N + +K+ ++ATYP ++G+ GA
Sbjct: 192 VGESQQEKLKVIGQLLGLAFQVRDDILDITANFEDLGKTPQKDVAAEKATYPAILGLNGA 251
Query: 272 KRYAKE-------LVAEANQELAY 288
KR+ +E L+AE E+A+
Sbjct: 252 KRFFEEQLEETEYLLAEVEAEIAF 275
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 296
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 58/268 (21%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
+ Y TL G+R+ + + + EL G + V+P AC EM+ T +L
Sbjct: 37 MHYSTLSG--GKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMDNDD 94
Query: 136 --------------------NRALLCYAVEHMA--TKTKNVSPDRLVRAIGEISSAVGTR 173
ALL +A +A +K ++PD +V I ++S A G
Sbjct: 95 FRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVSLAAGGY 154
Query: 174 GVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGK 233
G++ G+ ++I + GKDVS L +I + G L+ S G + G S+ED+E ++ +G+
Sbjct: 155 GMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETIKCFGE 214
Query: 234 CVGLAYQVWDDILD--------------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELV 279
+GL +Q+ DDILD +MK KK T+ L G + L
Sbjct: 215 KLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKN------TFVNLFGFNKSVEIVNNLS 268
Query: 280 AEANQELAYFDPTRAAPLYHLADFLVSR 307
EA Q ++ ++ L DF+ R
Sbjct: 269 LEAKQLISNYNNNDF--FIQLTDFISKR 294
>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
Length = 297
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ ++S ++ ++ + ++ A G +G+ G+ +++ S+ K V+L EL+
Sbjct: 118 ALQAFAFE-ILTEAPSLSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSE--EDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + E E ++L +Y + +GLA+QV DDILD E
Sbjct: 177 IHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQTIGLAFQVQDDILDIEGDSAEI 236
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G+ GAK+ A+EL A EL P L LA+F+V+R
Sbjct: 237 GKPVGSDLGLDKSTYPKLLGLEGAKQKAQELYQTALHELDNL-PFDTTALRALAEFIVNR 295
>gi|387129645|ref|YP_006292535.1| polyprenyl synthetase [Methylophaga sp. JAM7]
gi|386270934|gb|AFJ01848.1| Polyprenyl synthetase [Methylophaga sp. JAM7]
Length = 286
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML----------------- 130
+QY TL G+R+ L A+ E S++ +ACA EM+
Sbjct: 29 MQYATLNG--GKRLRAMLVYATGEAFEAEPSALDSVACAVEMIHAYSLIHDDMPMMDNDD 86
Query: 131 ---------------VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
L AL A H+ ++T ++ +L I E++ G G+
Sbjct: 87 LRRGRPSCHKAFDESTALLAGDALQTLAFHHL-SETALLAEQKLAM-IRELAFQSGIMGM 144
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGS-EEDIEKLRKYGKC 234
G+ +++ S G ++ L+ L + RL+ G LIEASV+ GV LR+Y
Sbjct: 145 AGGQALDLQSVGSELDLTTLQQMHRLKTGALIEASVMMGVYCAPEVPAHTYPALRRYAAA 204
Query: 235 VGLAYQVWDDILDNM--------KKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
+GLA+QV DD+LD + ++ +A D+ TYP L+G+A A+ AK+L+ EA L
Sbjct: 205 LGLAFQVQDDVLDVIADTQTLGKQQGADAARDKPTYPALLGLANAQDKAKDLIEEALTAL 264
Query: 287 AYFDPTRAAPLYHLADFLVSR 307
A P L LA F+V R
Sbjct: 265 AEI-PVETQALAALARFVVQR 284
>gi|345430245|ref|YP_004823365.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
Length = 297
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ ++S ++ ++ + ++ A G +G+ G+ +++ S+ K V+L EL+
Sbjct: 118 ALQAFAFE-ILTEAPSLSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSE--EDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + E E ++L +Y + +GLA+QV DDILD E
Sbjct: 177 IHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQAIGLAFQVQDDILDIEGNSAEI 236
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G+ GAK+ A+EL A EL P L LA+F+V+R
Sbjct: 237 GKPVGSDLDLDKSTYPKLLGLEGAKQKAQELYHTALHELDNL-PFDTTALRALAEFIVNR 295
>gi|392373426|ref|YP_003205259.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Candidatus Methylomirabilis oxyfera]
gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Candidatus Methylomirabilis oxyfera]
Length = 312
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE 222
I EI+ A G++G++ G+++++ + +++ L L ++ + G LI + G ++
Sbjct: 159 IREIAEAAGSKGMVGGQVVDMLQEDREIDLPTLTYLHEHKTGALIRVCLRVGGILASAGS 218
Query: 223 EDIEKLRKYGKCVGLAYQVWDDILDNMKK----KKEAGDD----EATYPKLMGVAGAKRY 274
E +E L +YG+ +GLA+Q+ DDILD K+AG D +AT+P L+G+ ++R+
Sbjct: 219 EQMEALTRYGERIGLAFQIVDDILDLEGSLEVLGKQAGSDLRKKKATFPALLGIEESRRW 278
Query: 275 AKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
A LV+EA + +A F R L +A+F+V R
Sbjct: 279 AHRLVSEAQEAVAVFG-DRGVALQAIAEFVVMRR 311
>gi|419955642|ref|ZP_14471767.1| geranyltranstransferase [Pseudomonas stutzeri TS44]
gi|387967555|gb|EIK51855.1| geranyltranstransferase [Pseudomonas stutzeri TS44]
Length = 296
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 114/253 (45%), Gaps = 45/253 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+ ++ ACA E++ +L
Sbjct: 44 GKRVRPLLVYAACEALRGDRATADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVR--AIGEISSAVGTRGVLAGRIMEI 183
L A E MA N PD +R ++ A G G++ G+ +++
Sbjct: 104 AFDEACAILAGDGLQSLAFEAMAEARHN-PPDAALRLRMFAVLARAAGPAGMVGGQAIDL 162
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEED-IEKLRKYGKCVGLAYQVW 242
S G + L+ + R + G LIEASV G L G ++ D + L Y + +GLA+QV
Sbjct: 163 GSVGLKLDREALELMHRHKTGALIEASVQLGALASGHADADSLGALSHYARGIGLAFQVQ 222
Query: 243 DDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K + A D+ TYP L+G+ AK YA EL +A L FD A
Sbjct: 223 DDILDVESDTATLGKHQGADIARDKPTYPALLGLDEAKAYAIELRDQALHALRPFD-IAA 281
Query: 295 APLYHLADFLVSR 307
PL LA F+V R
Sbjct: 282 EPLRELARFIVGR 294
>gi|425073666|ref|ZP_18476772.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
gi|404594937|gb|EKA95492.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
Length = 307
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 18/185 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPD----RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
AL A E +A KN PD V I E+++A G G+ G+ ++++++ K + L
Sbjct: 124 ALQTLAFEILA---KNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLV 180
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI-EKLRKYGKCVGLAYQVWDDILDNMKKK 252
L+ I + G LI A+V G L G D+ L KY +GLA+QV DDILD +
Sbjct: 181 ALEKIHLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGST 240
Query: 253 KEAG-----DDEA---TYPKLMGVAGAKRYAKELVAEANQELAYFDPTR--AAPLYHLAD 302
+E G D EA TYP L+G+A A++ A+EL EA LA+ + + L LA+
Sbjct: 241 EETGKRQGSDQEAGKSTYPALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLAN 300
Query: 303 FLVSR 307
F+V R
Sbjct: 301 FIVER 305
>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
gi|255671156|dbj|BAF09598.2| Os02g0668100, partial [Oryza sativa Japonica Group]
Length = 349
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 60/293 (20%)
Query: 60 EIQIDEYMTLKA-KKINKALFEGAAVPLILQYPTLPN--HEG--ERVHGTLCIASCELVG 114
E ++D M ++ ++I+ A+ +Y LP +EG +R LC+A+CEL+G
Sbjct: 61 EAELDAAMPIRTPERIHSAM----------RYAVLPGAGNEGTAKRAPPVLCVAACELLG 110
Query: 115 GNESSVMPLACAAEMLVTLAL--------------------------------NRALLCY 142
+ +P A A EML +L AL
Sbjct: 111 APREAALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPL 170
Query: 143 AVEHMATKTKNVSP---DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
A H+ T + P L+R +GE++ AVG+ G+ AG+ +++ +L E + +K
Sbjct: 171 AYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGA---TALGEAEVMK 227
Query: 200 RL--RCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
L + G++ E S CG ++GG ++ LR+YG+ +G+ YQ+ DDI K +
Sbjct: 228 VLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASGNGKMRSN 287
Query: 258 DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPT---RAAPLYHLADFLVSR 307
A+ + +G+ A +EL A+A E F R PLY D+ V R
Sbjct: 288 --ASVLRALGMDRALGIVEELKAQAKMEADRFGDKYGERVLPLYSFVDYAVER 338
>gi|291287805|ref|YP_003504621.1| polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 299
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +S + G P A A EML T +L
Sbjct: 47 GKRLRPALVFSSYGVFEGYFDKATPFAAAVEMLHTYSLIHDDLPAMDDDDYRRGKPTNHK 106
Query: 136 ----------NRALLCYAVEHMATKTKN--VSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
LL A E M N V P +++ A +++ A G RG++ G+ ++
Sbjct: 107 MYGEATAILAGDGLLTKAFEVMCNAEINPDVEPAQMLEAAYKLADAAGDRGMVGGQFTDM 166
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++ + + +DFI + +LI G ++G GSE+D +++R+YG +GLA+Q+ D
Sbjct: 167 EAEDGVFNSATVDFIHMNKTSRLISYCCELGAILGFGSEDDKKRMREYGIRIGLAFQIVD 226
Query: 244 DILDNMKKKKEAGDD--------EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD +E G + +ATYP L G+ + R A+ L+ EA + ++ + T A
Sbjct: 227 DILDIASTTEELGKNVGSDQERGKATYPALHGLEESHRKAEMLIEEALEIISVYGKT-AE 285
Query: 296 PLYHLADFLVSR 307
P +A F++ R
Sbjct: 286 PCREIAKFIIER 297
>gi|421152012|ref|ZP_15611604.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 14886]
gi|404526144|gb|EKA36376.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 14886]
Length = 295
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+RV L A+CE +GG ACA E++ +L +R
Sbjct: 43 GKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHR 102
Query: 138 A------------LLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
A L A E +A +N + + + ++ A G+ G++ G+ +++
Sbjct: 103 AFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWD 243
S G + + L+ + R + G LIEASV G L G +E + L +Y + +GLA+QV D
Sbjct: 163 SVGVTLDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQD 222
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K G D+A TYP L+G+ AK YA EL A L F P+ A
Sbjct: 223 DILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-AD 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRQLARYIVER 293
>gi|410453715|ref|ZP_11307660.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
gi|409932929|gb|EKN69883.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
Length = 297
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 43/240 (17%)
Query: 76 KALFEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL 133
+AL E P +++ + + E G+R+ L A+ + G + +P+A A EM+ T
Sbjct: 22 RALVEKLDAPSVIKESMIYSLEAGGKRIRPLLLFATLDAFGIDPKKGLPVAAAIEMIHTY 81
Query: 134 AL--------------------------------NRALLCYAVEHMATKTKNVSP-DRLV 160
+L ALL Y+ E + + +P + +
Sbjct: 82 SLIHDDLPSMDNDDLRRGKPTNHKVFGDAIAILAGDALLTYSFEVIGLLSNEFAPANTKL 141
Query: 161 RAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG 220
+ + E++ A GT G++ G++ ++ +GK+++L ELD+I + GKL+ SVV G ++
Sbjct: 142 KLVVEMAKAAGTEGMVGGQVADMEGEGKNLTLPELDYIHIHKTGKLLRFSVVAGAILADS 201
Query: 221 SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK----KKEAGDD----EATYPKLMGVAGAK 272
S+ ++ L + +GLA+Q+ DDILD + K G D ++TYP+L+ + GA+
Sbjct: 202 SQSQLDHLSGFAHHLGLAFQIQDDILDLIGNPQVIGKPVGSDTTNHKSTYPQLLSLEGAR 261
>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|425066900|ref|ZP_18470016.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|404601571|gb|EKB01963.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
Length = 307
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 18/185 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPD----RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
AL A E +A KN PD V I E+++A G G+ G+ ++++++ K + L
Sbjct: 124 ALQTLAFEILA---KNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLV 180
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI-EKLRKYGKCVGLAYQVWDDILDNMKKK 252
L+ I + G LI A+V G L G D+ L KY +GLA+QV DDILD +
Sbjct: 181 ALEKIHLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGST 240
Query: 253 KEAG-----DDEA---TYPKLMGVAGAKRYAKELVAEANQELAYFDPTR--AAPLYHLAD 302
+E G D EA TYP L+G+A A++ A+EL EA LA+ + + L LA+
Sbjct: 241 EETGKRQGSDQEAGKSTYPALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLAN 300
Query: 303 FLVSR 307
F+V R
Sbjct: 301 FIVER 305
>gi|419801571|ref|ZP_14326795.1| polyprenyl synthetase [Haemophilus parainfluenzae HK262]
gi|419844764|ref|ZP_14368051.1| polyprenyl synthetase [Haemophilus parainfluenzae HK2019]
gi|385193487|gb|EIF40849.1| polyprenyl synthetase [Haemophilus parainfluenzae HK262]
gi|386416690|gb|EIJ31182.1| polyprenyl synthetase [Haemophilus parainfluenzae HK2019]
Length = 297
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ ++S ++ ++ + ++ A G +G+ G+ +++ S+ K V+L+EL+
Sbjct: 118 ALQAFAFE-ILTQAPSLSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEK-LRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + +++EK L +Y + +GLA+QV DDILD E
Sbjct: 177 IHRNKTGALLTAALKLGFICSPHFKNKELEKQLERYSQAIGLAFQVQDDILDIEGDSAEI 236
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G+ GAK+ A+EL A EL P L LA+F+V+R
Sbjct: 237 GKPVGSDLGLDKSTYPKLLGLEGAKQKAQELYQTALHELDNL-PFDTTALRALAEFIVNR 295
>gi|373496649|ref|ZP_09587195.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
gi|371965538|gb|EHO83038.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
Length = 295
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 9/186 (4%)
Query: 133 LALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSL 192
+ + ALL +A + K K++ ++++ + SS G G++ G++++I S+GK + L
Sbjct: 110 ILIGDALLTHAFYILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDL 169
Query: 193 SELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DN 248
L +I + GKL++ V +IG +E+ E L K+ +GLA+Q+ DDIL D
Sbjct: 170 ETLKYIHSNKTGKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDF 229
Query: 249 MKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELA-YFDPTRAAPLYHLADF 303
K G D ++TYP L+G+ +K KE +AEA +A F ++ L LAD+
Sbjct: 230 STLGKPVGSDIELGKSTYPALIGMVESKALLKETIAEAKTIVAEKFGVEKSNILLELADY 289
Query: 304 LVSRHK 309
+ +R+K
Sbjct: 290 IGNRNK 295
>gi|347753252|ref|YP_004860817.1| polyprenyl synthetase [Bacillus coagulans 36D1]
gi|347585770|gb|AEP02037.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
Length = 289
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 46/234 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ L +++ +G M ACA EML T +L N
Sbjct: 40 GKRIRPLLLLSTVSALGKPAGRGMQTACAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHK 99
Query: 139 LLCYAVEHMATKTKNVSPDRL------------VRAIGEISSAVGTRGVLAGRIMEINSK 186
+ AV +A RL V+ I ++ + G G++AG++ ++ +
Sbjct: 100 VFGEAVAILAGDGLLTHSFRLIAEDPGLDDALKVKLIALLAKSAGPEGMVAGQVADMEGE 159
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
K ++L EL +I + GKL+ SV+ G +IGG S E +EK ++ +GLA+Q+ DDIL
Sbjct: 160 NKTLTLEELQYIHAHKTGKLLRFSVLAGAMIGGASTEQLEKFGQFADHLGLAFQIRDDIL 219
Query: 247 D----NMKKKKEAGDDEA----TYPKLMGVAGAK-------RYAKELVAEANQE 285
D K K G DE+ TYP L+ + GAK R AK+ +AE E
Sbjct: 220 DIEGEQEKIGKRVGSDESRHKSTYPALLTLEGAKQELRRHTRLAKQCLAETGAE 273
>gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
Length = 305
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 138 ALLCYAVEHMATKTK-NVSPD---RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
AL+ YA E A + ++ PD R+ RA+G ++ G G++ G+ +++ G +
Sbjct: 123 ALMMYAFETAANAFETSIDPDELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPGD 182
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK- 252
+L+FI RL+ G LIEAS++ G ++GG +EED + + +G+A+Q+ DDILD +
Sbjct: 183 KLEFIYRLKTGALIEASMLIGAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDVTGSQD 242
Query: 253 ---KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
K +G DE TY L G+ AK+ +++ EA +EL P L L LV
Sbjct: 243 VTGKPSGSDEKNKKTTYVTLEGLDKAKKDVEQISTEAIEELNKL-PGNNDFLEQLIRALV 301
Query: 306 SRHK 309
R K
Sbjct: 302 GRQK 305
>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
Length = 289
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 35/220 (15%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCYAVEHMA----TKTK 152
G+R L + EL G + ++P A A EM+ T +L + L C + M T K
Sbjct: 52 GKRFRPVLSLLVGELFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHK 111
Query: 153 NVSPDRLVRA-----------IGE---------------ISSAVGTRGVLAGRIMEINSK 186
D + A I E +SSA G RG++ G+ +++ +
Sbjct: 112 VFGEDFALLAGDALLTEAFMLIAENYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAG 171
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
K +SL EL + RL+ G LI +V +I G +IE L+K+G+ +GLA+QV DD+L
Sbjct: 172 DKQMSLEELTHLHRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVL 231
Query: 247 DNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
D+ +K G D ++ ++G+ G K Y K++ A EL
Sbjct: 232 DHGEK----GQDLRSFTGILGLEGTKTYLKDVSASTLAEL 267
>gi|384176049|ref|YP_005557434.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595273|gb|AEP91460.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 296
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ + +A G +E +P+ CA EM+ T +L N
Sbjct: 45 GKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 139 LLCYAVEHMATK--------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A +A + VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSGEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ + V+L EL+ I + KL+ V+ G ++ EEDIE LR + +G+ +Q+ DD
Sbjct: 165 AENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIETLRAFSSHIGIGFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +++ G +D++TYP L+ + GAK + EA + + +
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHIKEAKRLIDGLSLQKDL- 283
Query: 297 LYHLADFLVSR 307
LY L D + +R
Sbjct: 284 LYELCDLIAAR 294
>gi|62959209|gb|AAY23712.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP840]
Length = 145
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 73/117 (62%)
Query: 131 VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDV 190
V + ALL A E +A ++ V DRL++ +GE+S G G++ G+++++ +GK+V
Sbjct: 27 VAILAGDALLTRAFEMVALRSPAVPADRLLKVVGELSLVAGAPGLVGGQVVDLECEGKEV 86
Query: 191 SLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
L L++I + G L+ A V+ G +IGG + I+ LR Y + +GLA+Q+ DDILD
Sbjct: 87 DLETLEYIHLHKTGALLSACVITGAMIGGADDALIKALRTYARGIGLAFQIIDDILD 143
>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 49/264 (18%)
Query: 88 LQYPTLPN--HEG--ERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------- 135
++Y LP +EG +R LC+A+CEL+G + +P A A EML +L
Sbjct: 73 MRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAALPAAVALEMLHAASLVHDDLPCF 132
Query: 136 ------------------------NRALLCYAVEHMATKTKNVSP---DRLVRAIGEISS 168
AL A H+ T + P L+R +GE++
Sbjct: 133 DAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELAR 192
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRL--RCGKLIEASVVCGVLIGGGSEEDIE 226
AVG+ G+ AG+ +++ +L E + +K L + G++ E S CG ++GG ++
Sbjct: 193 AVGSTGMAAGQFLDLAGA---TALGEAEVMKVLTKKFGEMAECSAACGAMLGGAGPDEEA 249
Query: 227 KLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
LR+YG+ +G+ YQ+ DDI K + A+ + +G+ A +EL A+A E
Sbjct: 250 ALRRYGRTIGVLYQLVDDIRSASGNGKMRSN--ASVLRALGMDRALGIVEELKAQAKMEA 307
Query: 287 AYFDPT---RAAPLYHLADFLVSR 307
F R PLY D+ V R
Sbjct: 308 DRFGDKYGERVLPLYSFVDYAVER 331
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 139/301 (46%), Gaps = 45/301 (14%)
Query: 26 KVAPNPKASHVPKSSSLDQAENLTIKSNNNNPFPEIQIDEYMTLKAKKINKALFE--GAA 83
++ P P A VP SS+ +A + + P + ++ TL+ + A E GAA
Sbjct: 24 RLLPAPDA--VP--SSIHRAIRHSTFAGGKRLRPVLAMEAARTLRRDRALPAGVEDLGAA 79
Query: 84 VPLILQY-------PTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLALN 136
+ ++ Y P L N + R T C +V G +++ A + L TLA
Sbjct: 80 IEMLHTYSLIHDDLPALDNDDLRRGKPT-----CHVVFGEAIAIL----AGDALQTLAYQ 130
Query: 137 R--ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSE 194
L C A + ++R I E + V G++ G+++++ +G +
Sbjct: 131 TLAQLRCPAPATV----------EIIRLIAEATGTV--EGMIGGQVLDLEGEGTRPTAES 178
Query: 195 LDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK-- 252
+D I R + G LI S+V G + G + ED+E+L +G+ GLA+Q+ DD+LD +
Sbjct: 179 VDAIHRAKTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDSAH 238
Query: 253 ------KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVS 306
K+ D+AT+P + G+ ++R A L+ EA L + P A L +A FLV
Sbjct: 239 LGKTAGKDLATDKATWPAVFGIEASRRDAARLIDEAFAALEPYGPA-ADGLKTVARFLVE 297
Query: 307 R 307
R
Sbjct: 298 R 298
>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
Length = 344
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 49/264 (18%)
Query: 88 LQYPTLPN--HEG--ERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------- 135
++Y LP +EG +R LC+A+CEL+G + +P A A EML +L
Sbjct: 75 MRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAALPAAVALEMLHAASLVHDDLPCF 134
Query: 136 ------------------------NRALLCYAVEHMATKTKNVSP---DRLVRAIGEISS 168
AL A H+ T + P L+R +GE++
Sbjct: 135 DAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELAR 194
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRL--RCGKLIEASVVCGVLIGGGSEEDIE 226
AVG+ G+ AG+ +++ +L E + +K L + G++ E S CG ++GG ++
Sbjct: 195 AVGSTGMAAGQFLDLAGA---TALGEAEVMKVLTKKFGEMAECSAACGAMLGGAGPDEEA 251
Query: 227 KLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
LR+YG+ +G+ YQ+ DDI K + A+ + +G+ A +EL A+A E
Sbjct: 252 ALRRYGRTIGVLYQLVDDIRSASGNGKMRSN--ASVLRALGMDRALGIVEELKAQAKMEA 309
Query: 287 AYFDPT---RAAPLYHLADFLVSR 307
F R PLY D+ V R
Sbjct: 310 DRFGDKYGERVLPLYSFVDYAVER 333
>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
gi|166029775|gb|EDR48532.1| polyprenyl synthetase [Dorea formicigenerans ATCC 27755]
Length = 300
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 50/231 (21%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + L GG+ + P A EM+ T +L
Sbjct: 48 GKRLRPMLMKETYTLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHV 107
Query: 136 ----------NRALLCYAVEHMATKTKNVSPD------RLVRAIGEISSAVGTRGVLAGR 179
ALL YA E A K + P+ +R +GE G G+L G+
Sbjct: 108 VYGEDMAILAGDALLNYAFE-TAVKAFVLEPEDSMTIGNAIRVLGE---KAGIYGMLGGQ 163
Query: 180 IMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAY 239
++++ G VS LD I L+ G LIEA+++ G ++GG S+E+++ + + VGLA+
Sbjct: 164 VIDVKETGHAVSKDVLDTIYELKTGALIEAAMMIGAILGGASQEEVKTVERIASLVGLAF 223
Query: 240 QVWDDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
QV DDILD + ++E G +++ TY L+G+ AK+ +E EA
Sbjct: 224 QVQDDILDVISTQEELGKPIHSDEKNEKTTYVTLLGIDDAKKVVEEKSEEA 274
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 79/313 (25%)
Query: 54 NNNPFPEIQIDE-----YMTLKAKK-------INKALFEGAAVPLILQYPTLPNHEGERV 101
N F + Q+ E ++T KAKK I+ LF G G+R+
Sbjct: 10 ENYIFEQQQVVESALRKFVTGKAKKPRILHEAIDYCLFSG----------------GKRL 53
Query: 102 HGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------------- 135
LC+A V N +P+ACA E + T +L
Sbjct: 54 RPILCLAGAHAVCRNSDCALPMACAVECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGE 113
Query: 136 ------NRALLCYAVE--HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
ALL A E + + P + + I E++ G+R ++AG++ ++ ++G
Sbjct: 114 ALAILTGDALLALAFEVASLCSPLGRTYP--VSQMIWELARTAGSRALVAGQVADLEAEG 171
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
K++ L++L +I + LI S+ G + ++ ++ + +YG+ +GLA+Q+ DDILD
Sbjct: 172 KEIGLTQLRYIHCRKTAALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDDILD 231
Query: 248 NMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPT---RAAP 296
+ K AG D+ ATYP++MG+ Y+KE A Q+ + +
Sbjct: 232 VTQTTEILGKSAGKDQKAKKATYPRIMGL----EYSKEAAAYYTQKALRYASKLGEKGRL 287
Query: 297 LYHLADFLVSRHK 309
L LA+FL++R K
Sbjct: 288 LSDLANFLLTREK 300
>gi|359443737|ref|ZP_09233558.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20429]
gi|358034293|dbj|GAA69807.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20429]
Length = 295
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E +A S V+ I ++ A G +G++ G+ ++I + K +++ EL+
Sbjct: 116 ALQTLAFELIANHKFECSSQTQVKMIATLAHASGLQGMVGGQGLDIAATDKVITVQELER 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKK 252
I +L+ G LI ++ G L ++ +E L +G +GLA+QV DDILD +
Sbjct: 176 IHKLKTGALINCAITLGALCSEKADQQTLENLSVFGYAIGLAFQVHDDILDVEGDTVILG 235
Query: 253 KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G D +ATYP L+G+ GAK A+ L+ +A++ LA D L LA++L+ R
Sbjct: 236 KPQGSDIAANKATYPALLGMLGAKEKAQNLIQQAHEALANIDAD-TTLLASLANYLIER 293
>gi|392429068|ref|YP_006470079.1| farnesyl diphosphate synthase [Streptococcus intermedius JTH08]
gi|419776613|ref|ZP_14302535.1| geranyltranstransferase [Streptococcus intermedius SK54]
gi|383846024|gb|EID83424.1| geranyltranstransferase [Streptococcus intermedius SK54]
gi|391758214|dbj|BAM23831.1| farnesyl diphosphate synthase [Streptococcus intermedius JTH08]
Length = 300
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 10/138 (7%)
Query: 160 VRA--IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
+RA I E+S A GT G++ G+++++ +G+DVSL EL I + GKL+ + LI
Sbjct: 130 IRANLIAELSQAAGTFGMVGGQVLDMQGEGRDVSLEELQVIHANKTGKLLTYPFIAAGLI 189
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK--------KKEAGDDEATYPKLMGVA 269
+E EKLRK G+ +GLA+QV DDILD +K+ +ATYP ++G+
Sbjct: 190 AELAEPQQEKLRKTGQLLGLAFQVRDDILDETASFEDLGKTPQKDVAAGKATYPAILGLD 249
Query: 270 GAKRYAKELVAEANQELA 287
GAK + +E ++ A LA
Sbjct: 250 GAKHFFEEQLSAAEILLA 267
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 95/153 (62%), Gaps = 9/153 (5%)
Query: 139 LLCYAVEHM-ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA + + A + +S + +R E++ A G G++AG++ ++ ++GK ++L+EL++
Sbjct: 119 LLTYAFQVVSAYNYEGISSEIKLRLALELAKAAGPEGMVAGQVADMEAEGKHLTLNELEY 178
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + + G+L+E +V+ G ++ G ++E+ EKL + K VGLA+Q+ DDILD ++E G
Sbjct: 179 IHKHKTGRLLEFAVLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEGTEEEIGK 238
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEA 282
++++TY L + AK +E +A+A
Sbjct: 239 PIGSDASNEKSTYTTLFAIDEAKSILEETIAKA 271
>gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
Length = 295
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+RV L A+CE +GG ACA E++ +L +R
Sbjct: 43 GKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHR 102
Query: 138 A------------LLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
A L A E +A +N + + + ++ A G+ G++ G+ +++
Sbjct: 103 AFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWD 243
S G + + L+ + R + G LIEASV G L G +E + L +Y + +GLA+QV D
Sbjct: 163 SVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAESASLAALERYAEAIGLAFQVQD 222
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K G D+A TYP L+G+ AK YA EL A L F P+ A
Sbjct: 223 DILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-AD 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRQLARYIVER 293
>gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2]
gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|386056964|ref|YP_005973486.1| geranyltranstransferase [Pseudomonas aeruginosa M18]
gi|392982230|ref|YP_006480817.1| geranyltranstransferase [Pseudomonas aeruginosa DK2]
gi|418588459|ref|ZP_13152470.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418592656|ref|ZP_13156522.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|419756862|ref|ZP_14283207.1| geranyltranstransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|420137641|ref|ZP_14645606.1| geranyltranstransferase [Pseudomonas aeruginosa CIG1]
gi|421158077|ref|ZP_15617375.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 25324]
gi|421518592|ref|ZP_15965266.1| geranyltranstransferase [Pseudomonas aeruginosa PAO579]
gi|424939078|ref|ZP_18354841.1| geranyltranstransferase [Pseudomonas aeruginosa NCMG1179]
gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|346055524|dbj|GAA15407.1| geranyltranstransferase [Pseudomonas aeruginosa NCMG1179]
gi|347303270|gb|AEO73384.1| geranyltranstransferase [Pseudomonas aeruginosa M18]
gi|375040746|gb|EHS33484.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375048528|gb|EHS41049.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|384396617|gb|EIE43035.1| geranyltranstransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317735|gb|AFM63115.1| geranyltranstransferase [Pseudomonas aeruginosa DK2]
gi|403249617|gb|EJY63108.1| geranyltranstransferase [Pseudomonas aeruginosa CIG1]
gi|404348074|gb|EJZ74423.1| geranyltranstransferase [Pseudomonas aeruginosa PAO579]
gi|404550013|gb|EKA58821.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 25324]
Length = 295
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+RV L A+CE +GG ACA E++ +L +R
Sbjct: 43 GKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHR 102
Query: 138 A------------LLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
A L A E +A +N + + + ++ A G+ G++ G+ +++
Sbjct: 103 AFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWD 243
S G + + L+ + R + G LIEASV G L G +E + L +Y + +GLA+QV D
Sbjct: 163 SVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQD 222
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K G D+A TYP L+G+ AK YA EL A L F P+ A
Sbjct: 223 DILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-AD 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRQLARYIVER 293
>gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703]
gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703]
Length = 303
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 149 TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIE 208
T+ VS + I E++SA G G+ G+ +++ ++G+ V L+ L+ I R + G LI
Sbjct: 129 TEMPRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAALEQIHRHKTGALIR 188
Query: 209 ASVVCGVLIGG-GSEEDIEKLRKYGKCVGLAYQVWDDILDNM-----KKKKEAGDDE--- 259
ASV G L G + + L +Y +GLA+QV DDILD + K++ D +
Sbjct: 189 ASVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGDSATTGKRQGADQQLGK 248
Query: 260 ATYPKLMGVAGAKRYAKELVAEA-----NQELAYFDPTRAAPLYHLADFLVSRHK 309
+TYP L+G+A AK A EL E+ E A P PL LA+++V R K
Sbjct: 249 STYPALLGLAQAKAKALELYQESLAALDELEAAIAHPAAILPLRSLANYIVERDK 303
>gi|425063220|ref|ZP_18466345.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida X73]
gi|404382783|gb|EJZ79240.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida X73]
Length = 295
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ + ++ + + +S A G +G+ G+ +++ S+ K +SL EL+
Sbjct: 116 ALQAFAFE-LLTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILD-----NMK 250
I R + G ++ A++ G + + D ++L++Y + +GLA+QV DDILD ++
Sbjct: 175 IHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGESDII 234
Query: 251 KKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K D D++TYPKL+G+AGAK+ A+EL A EL P + L +A+F+V+R
Sbjct: 235 GKTVGSDLLADKSTYPKLLGLAGAKQKAQELYQNAIAELESI-PFDTSALRAIAEFVVNR 293
>gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 287
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 16/178 (8%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL YA E + + K +S +++V+ I +S VG G++ G+ +I KDV +F
Sbjct: 116 GLLTYAFE-VISNNKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKDV-----EF 169
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG- 256
I + K + A G ++ +EE+I KL+ YG +GLA+Q+WDDILD + +++AG
Sbjct: 170 IHLNKTAKFLSACCQIGGVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEKAGK 229
Query: 257 -------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ TYP L G+ + + AK+ V +A E+ D + L LA +++SR
Sbjct: 230 RLHKDKDKNKITYPSLYGLEKSIQIAKDCVEKAKNEIR--DLKKPEFLIKLAKYIISR 285
>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
Length = 295
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 54/297 (18%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM ++ K I+ + F+ +++ L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLENNFLDMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
L G+ + A + E++ T +L L
Sbjct: 59 LFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L ++ E ++ NV+ L + + EIS A G G++ G+ +++ + +D+ L +
Sbjct: 119 LTHSFEILSNA--NVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILH 176
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEA 255
+ G +I +V G + ++E + KYG+ +GLA+Q+ DDIL DN K
Sbjct: 177 SKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 236
Query: 256 GDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP-LYHLADFLVSR 307
G DE TY K G+ GAK A E EA L +D A L LA+++V R
Sbjct: 237 GKDEKEGKLTYVKQFGLEGAKEKAIETSKEAIDYLNVYDDNEAKNILIELANYIVER 293
>gi|443631721|ref|ZP_21115901.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347836|gb|ELS61893.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 296
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ + +A G +E +P+ CA EM+ T +L N
Sbjct: 45 GKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 139 LLCYAVEHMATK--------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A +A + VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ + V+L EL+ I + KL+ V+ G ++ EEDIE LR + +G+ +Q+ DD
Sbjct: 165 AENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +++ G +D++TYP L+ + GAK + EA + + +
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHINEAKRLIGGLSLQKDL- 283
Query: 297 LYHLADFLVSR 307
L+ L D + +R
Sbjct: 284 LFELCDLIAAR 294
>gi|346306460|ref|ZP_08848616.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
gi|345897834|gb|EGX67731.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
Length = 300
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 61/284 (21%)
Query: 47 NLTIKSNNNNPFPEIQ--IDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGT 104
NL K EI+ + Y+ K K K + E ++Y L G+R+
Sbjct: 4 NLDFKVQKEQKVREIEDSLQNYLP-KQKGYQKIIMEA------MEYSLLAG--GKRLRPM 54
Query: 105 LCIASCELVGGNESSVMPLACAAEMLVTLAL----------------------------- 135
L + L GG+ + P A EM+ T +L
Sbjct: 55 LMKETYTLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMA 114
Query: 136 ---NRALLCYAVEHMATKTKNVSP-DRL-----VRAIGEISSAVGTRGVLAGRIMEINSK 186
ALL YA E A K + P D L +R +GE G G+L G+++++
Sbjct: 115 ILAGDALLNYAFE-TAVKAFVLEPEDSLTIGNAIRVLGE---KAGIYGMLGGQVIDVKET 170
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
G VS LD I L+ G LIEA+++ G ++GG S+E+++ + + VGLA+QV DDIL
Sbjct: 171 GHAVSKDVLDTIYELKTGALIEAAMMIGAILGGASKEEVKTVERIASLVGLAFQVQDDIL 230
Query: 247 DNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
D ++E G +++ TY L+G+ AK+ +E EA
Sbjct: 231 DVTSTQEELGKPIHSDEKNEKTTYVTLLGIDDAKKVVEEKSEEA 274
>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
Length = 289
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 119/250 (47%), Gaps = 40/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + + + N +MP+ACA EM+ T +L
Sbjct: 40 GKRIRPILMLCTYSVYKDNYKEIMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHK 99
Query: 136 --NRALLCYAVEHMATKTKNVSPD-------RLVRAIGEISSAVGTRGVLAGRIMEINSK 186
A+ A + + + N+ + + ++A IS A G G++ G++++I S+
Sbjct: 100 VFGEAMAILAGDGLLNEAMNIMFNYSLNNDIKALKASKIISEAAGVEGMIGGQVVDIISE 159
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
GK +S+ L ++ + + GKLI++S++ G ++G ED+ L ++G+ +GLA+Q+ DDIL
Sbjct: 160 GKKISIDNLRYMHKNKTGKLIKSSIIAGAILGDAPNEDVNILDEFGEKLGLAFQIKDDIL 219
Query: 247 DNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + +K G +++ T+ G+ G K L E + L + L
Sbjct: 220 DVIGDEKILGKEVHKDKENNKTTFISEFGLEGCKEMCVNLTEECLKLLKQI-KSNTGELE 278
Query: 299 HLADFLVSRH 308
++ +FL+ R
Sbjct: 279 NITEFLMKRQ 288
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 46/255 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+RV L A+ ELVG + + ACA E++
Sbjct: 67 GKRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMPAMDNDDMRRGKPTVHR 126
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPD--RLVRA--IGEISSAVGTRGVLAGRIM 181
+ + + AL A E + P R+ A + ++ A G+ G+ G+ +
Sbjct: 127 QYGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAVLARAAGSWGMAGGQAL 186
Query: 182 EINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI-EKLRKYGKCVGLAYQ 240
+I G +S +L+ + R + G ++ SV G+L GG D+ E +++YG+ +GLA+Q
Sbjct: 187 DIEGVGLRLSRPQLEAMHRAKTGAMLSVSVELGLLAGGQPSADLAEAMQRYGRAIGLAFQ 246
Query: 241 VWDDIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPT 292
V DDIL D+ K AG D+A TY L+G+ GA+ A +L A+A+ L P
Sbjct: 247 VVDDILDVTADSATLGKTAGKDQAQDKPTYVSLLGLEGARALATDLHAQAHACLQALGP- 305
Query: 293 RAAPLYHLADFLVSR 307
RA L LADF+V R
Sbjct: 306 RADRLRMLADFIVER 320
>gi|431806893|ref|YP_007233791.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
gi|430780252|gb|AGA65536.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
Length = 295
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 54/297 (18%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM ++ K I+ + F+ +++ L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLENNFLDMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
L G+ + A + E++ T +L L
Sbjct: 59 LFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L ++ E ++ NV+ L + + EIS A G G++ G+ +++ + +D+ L +
Sbjct: 119 LTHSFEILSNA--NVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILH 176
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEA 255
+ G +I +V G + ++E + KYG+ +GLA+Q+ DDIL DN K
Sbjct: 177 SKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 236
Query: 256 GDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP-LYHLADFLVSR 307
G DE TY K G+ GAK A E EA L +D A L LA+++V R
Sbjct: 237 GKDEKDGKLTYVKQFGLEGAKEKAIETSKEAIDYLNVYDDNEAKNILIELANYIVER 293
>gi|49086036|gb|AAT51323.1| PA4043, partial [synthetic construct]
Length = 296
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+RV L A+CE +GG ACA E++ +L +R
Sbjct: 43 GKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHR 102
Query: 138 A------------LLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
A L A E +A +N + + + ++ A G+ G++ G+ +++
Sbjct: 103 AFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWD 243
S G + + L+ + R + G LIEASV G L G +E + L +Y + +GLA+QV D
Sbjct: 163 SVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQD 222
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K G D+A TYP L+G+ AK YA EL A L F P+ A
Sbjct: 223 DILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-AD 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRQLARYIVER 293
>gi|426402189|ref|YP_007021160.1| geranyltranstransferase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858857|gb|AFX99892.1| geranyltranstransferase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 289
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 35/220 (15%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-NRALLCYAVEHMA----TKTK 152
G+R L + EL G + ++P A A EM+ T +L + L C + M T K
Sbjct: 52 GKRFRPVLSLLVGELFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHK 111
Query: 153 NVSPDRLVRA-----------IGE---------------ISSAVGTRGVLAGRIMEINSK 186
D + A I E +SSA G RG++ G+ +++ +
Sbjct: 112 VFGEDFALLAGDALLTEAFMLIAENYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAG 171
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
+ +SL EL + RL+ G LI +V +I G +IE L+K+G+ +GLA+QV DD+L
Sbjct: 172 DRQMSLEELTHLHRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVL 231
Query: 247 DNMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
D+ +K G D ++ ++G+ G K Y K++ A EL
Sbjct: 232 DHGEK----GQDFRSFTGILGLEGTKTYLKDVSASTLAEL 267
>gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC
25259]
gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259]
Length = 296
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDI 225
++ A G+RG+ G+ +++ + GK + L+EL+F+ + G LI ASV+ G G SE
Sbjct: 146 LARASGSRGMAGGQAIDLANVGKSLDLTELEFMHIHKTGALIRASVLLGAECGTLSEPAR 205
Query: 226 EKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKE 277
L Y KC+GLA+QV DD+LD K+A +++ TY L+GV A+ A E
Sbjct: 206 TALDHYAKCIGLAFQVVDDVLDAEASTATLGKTAGKDAANNKPTYVSLLGVQRARERALE 265
Query: 278 LVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L A+A L P+ A L LADF+V R
Sbjct: 266 LRADACAALDPLGPS-ARRLRELADFVVER 294
>gi|333909071|ref|YP_004482657.1| Geranyltranstransferase [Marinomonas posidonica IVIA-Po-181]
gi|333479077|gb|AEF55738.1| Geranyltranstransferase [Marinomonas posidonica IVIA-Po-181]
Length = 293
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%), Gaps = 13/180 (7%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + +++ + + ++ I E+ A G G++ G+++++ + G D++ L
Sbjct: 115 ALQTFAFE-LLSQSHHTNASLKLQLIQELIHASGRHGMVTGQMIDLTNVGHDINQQALQQ 173
Query: 198 IKRLRCGKLIEASVVCGVL-IGGGSEEDIEKLRKYGKCVGLAYQVWDDILD-----NMKK 251
+ + + G LI ASV G + +G ++ +L +Y +GLA+QV DDI+D N
Sbjct: 174 MHQHKTGALIRASVRMGAISVGMLDRNNLTQLDRYANAIGLAFQVQDDIIDITSDTNTLG 233
Query: 252 KKEAGDDEA---TYPKLMGVAGAKRYAKELVAEANQELAYF-DPTRAAPLYHLADFLVSR 307
K + D+ A TYPKL+G+ GA+ +A+ L +A + F DP A PL LA++++ R
Sbjct: 234 KNQFSDEAANKPTYPKLLGLEGAQEFAQTLHQQAIDAIKPFGDP--AQPLVELANYIIGR 291
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A + +A + P + + +++ A G+RG+ G+ +++ S GK + EL+F
Sbjct: 123 ALQTLAFQVLAERPLGTDPANQLAMLNQLAIASGSRGMAGGQAIDLASVGKRLGREELEF 182
Query: 198 IKRLRCGKLIEASVVCGVLIGG--GSEEDIEKLRKYGKCVGLAYQVWDDILD-------- 247
+ + G LI A+V+ G GG G++E +L Y K VGL +QV DD+LD
Sbjct: 183 MHIHKTGALIRAAVLLGARAGGTLGADEH-ARLDHYAKVVGLLFQVVDDLLDAEADTATL 241
Query: 248 NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K+A +D+ TY L+G+ A+R A+E++ EA L F RA L LAD++V R
Sbjct: 242 GKTAGKDADNDKPTYVSLLGLVDARRLAEEMLDEARASLRPF-GARALRLEQLADYIVHR 300
>gi|403238230|ref|ZP_10916816.1| polyprenyl synthetase [Bacillus sp. 10403023]
Length = 297
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 46/271 (16%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGN 116
+++++++ + KI + L + P I++ + E G+R+ L + + G +
Sbjct: 5 EVEQFLSFQKNKIEEQLPKYISKLSAPKIIKDSMDYSLEAGGKRIRPLLLLGTLHSFGKD 64
Query: 117 ESSVMPLACAAEMLVTLAL--------------------------------NRALLCYAV 144
E+ + ACA EM+ T +L LL Y+
Sbjct: 65 ENIGLSTACAIEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEAIAVLAGDGLLTYSF 124
Query: 145 EHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
+ ++ N +SP++ + I E++ A G G++ G++ ++ +G ++L EL++I R +
Sbjct: 125 QLVSESVGNTISPEKKLLLITELAKAAGPEGMVGGQVADMEGEGAVLNLDELEYIHRHKT 184
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK--------KEA 255
GKL+ SV+ G ++ + E ++KL ++ +GLA+Q+ DDILD + +
Sbjct: 185 GKLLAYSVIAGAILADATSEQLDKLTQFAHHLGLAFQIRDDILDIEGTELVLGKPVGSDT 244
Query: 256 GDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
G+ + TYP L+ + GAK + EA + L
Sbjct: 245 GNHKNTYPALLTLEGAKEKLTFHIDEAKRFL 275
>gi|375362964|ref|YP_005131003.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451346362|ref|YP_007444993.1| geranyltranstransferase [Bacillus amyloliquefaciens IT-45]
gi|371568958|emb|CCF05808.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449850120|gb|AGF27112.1| geranyltranstransferase [Bacillus amyloliquefaciens IT-45]
Length = 296
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 47/292 (16%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGN 116
++D ++ + K I + L E A+P IL+ L + E G+R+ + +A G +
Sbjct: 4 KLDAFLASRKKLIEQQLSLYTERLAMPEILKKSMLYSLEAGGKRLRPLVVLAVLNAYGKD 63
Query: 117 ESSVMPLACAAEMLVTLAL-------------------NRALLCYAVEHMATK------- 150
E +P+ CA EM+ T +L N + A +A
Sbjct: 64 EKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESF 123
Query: 151 -------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
++ VS ++ +R + E+ SA GT G++ G+ ++ ++ K ++L EL+ I +
Sbjct: 124 KLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKT 183
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG------- 256
KL+ SV G ++ E+++EKLR + +G+ +Q+ DDILD +++ G
Sbjct: 184 AKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDT 243
Query: 257 -DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++++TYP L+ + GAK ++EA + ++ + L+ L D + +R
Sbjct: 244 SNEKSTYPSLLTLEGAKEKLAYHISEAKRIISGLSLQKEL-LHDLCDLIAAR 294
>gi|416877744|ref|ZP_11919959.1| geranyltranstransferase [Pseudomonas aeruginosa 152504]
gi|334839219|gb|EGM17911.1| geranyltranstransferase [Pseudomonas aeruginosa 152504]
Length = 295
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+RV L A+CE +GG ACA E++ +L +R
Sbjct: 43 GKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHR 102
Query: 138 A------------LLCYAVEHMATKTKNVSPDRL-VRAIGEISSAVGTRGVLAGRIMEIN 184
A L A E +A +N + + + ++ A G+ G++ G+ +++
Sbjct: 103 AFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWD 243
S G + + L+ + R + G LIEASV G L G +E + L +Y + +GLA+QV D
Sbjct: 163 SVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPATLAALERYAEAIGLAFQVQD 222
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K G D+A TYP L+G+ AK YA EL A L F P+ A
Sbjct: 223 DILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-AD 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRQLARYIVER 293
>gi|416228077|ref|ZP_11627429.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
gi|416239484|ref|ZP_11631957.1| geranyltranstransferase [Moraxella catarrhalis BC1]
gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1]
Length = 351
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G + +++ A + L ++A CY KN + D + + ++ S
Sbjct: 158 TCHIVYGEDVALL----AGDALQSIAFEVLFECY--------DKNSADDAIAYKLAKLLS 205
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
R V +G++++I + + +S +L+ I R + G LIEA+V+ G + + + L
Sbjct: 206 CRARRMV-SGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYL 264
Query: 229 RKYGKCVGLAYQVWDDIL----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVA 280
+ Y + +GLA+QV DD+L D + K AG DE +TY KL+GV GA+ YA +L
Sbjct: 265 KHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKSTYVKLLGVKGAQEYANQLFE 324
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSR 307
EA ++ Y+ L + D+L +R
Sbjct: 325 EARSQVKYWGDNNL--LLQITDWLQTR 349
>gi|392535103|ref|ZP_10282240.1| geranyltranstransferase [Pseudoalteromonas arctica A 37-1-2]
Length = 295
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E +A S V+ I ++ A G G++ G+ ++I + K +++ EL+
Sbjct: 116 ALQTLAFEFIANHKFACSSQTQVKMIATLAHASGLEGMVGGQGLDIAATDKVITVQELER 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKK 252
I +L+ G LI ++ G L ++ +E L +G +GLA+QV DDILD +
Sbjct: 176 IHKLKTGALINCAITLGALCSEKADQQTLENLSVFGYAIGLAFQVHDDILDVEGDTVILG 235
Query: 253 KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G D +ATYP L+G+ GAK A+ L+ +A++ LA D L LA++L+ R
Sbjct: 236 KPQGSDIAANKATYPALLGMLGAKEKAQNLIQQAHEALANIDAD-TTLLASLANYLIER 293
>gi|359432651|ref|ZP_09223016.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20652]
gi|357920702|dbj|GAA59265.1| farnesyl diphosphate synthase [Pseudoalteromonas sp. BSi20652]
Length = 295
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E +A S V+ I ++ A G +G++ G+ ++I + K +++ EL+
Sbjct: 116 ALQALAFELIANHKFECSSQTQVKMISTLAHASGLQGMVGGQGLDIAATDKVITVQELER 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKK 252
I +L+ G LI ++ G L ++ +E L +G +GLA+QV DDILD +
Sbjct: 176 IHKLKTGALINCAITLGALCSEKADQQTLENLSIFGYAIGLAFQVHDDILDVEGDTVILG 235
Query: 253 KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G D +ATYP L+G+ GAK A+ L+ +A++ LA D L LA++L+ R
Sbjct: 236 KPQGSDIAANKATYPALLGMLGAKEKAQNLIQQAHEALANIDAD-TTHLASLANYLIER 293
>gi|421780541|ref|ZP_16217029.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|407812229|gb|EKF83015.1| geranyltranstransferase [Moraxella catarrhalis RH4]
Length = 351
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G + +++ A + L ++A CY KN + D + + ++ S
Sbjct: 158 TCHIVYGEDVALL----AGDALQSIAFEVLFECY--------DKNSADDAIAYKLAKLLS 205
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
R V +G++++I + + +S +L+ I R + G LIEA+V+ G + + + L
Sbjct: 206 CRARRMV-SGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYL 264
Query: 229 RKYGKCVGLAYQVWDDIL----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVA 280
+ Y + +GLA+QV DD+L D + K AG DE +TY KL+GV GA+ YA +L
Sbjct: 265 KHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKSTYVKLLGVKGAQEYANQLFE 324
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSR 307
EA ++ Y+ L + D+L +R
Sbjct: 325 EARSQVKYWGDNNL--LLQITDWLQTR 349
>gi|416156489|ref|ZP_11604528.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
Length = 326
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G + +++ A + L ++A CY KN + D + + ++ S
Sbjct: 133 TCHIVYGEDIALL----AGDALQSIAFEVLFECY--------DKNSADDAIAYKLAKLLS 180
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
R V +G++++I + + +S +L+ I R + G LIEA+V+ G + + + L
Sbjct: 181 CRARRMV-SGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYL 239
Query: 229 RKYGKCVGLAYQVWDDIL----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVA 280
+ Y + +GLA+QV DD+L D + K AG DE +TY KL+GV GA+ YA +L
Sbjct: 240 KHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKSTYVKLLGVKGAQEYANQLFE 299
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSR 307
EA ++ Y+ L + D+L +R
Sbjct: 300 EARSQVKYWGDNNL--LLQITDWLQTR 324
>gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|421263266|ref|ZP_15714323.1| hypothetical protein KCU_02804 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70]
gi|401689776|gb|EJS85153.1| hypothetical protein KCU_02804 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 295
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ + ++ + + +S A G +G+ G+ +++ S+ K +SL EL+
Sbjct: 116 ALQAFAFE-ILTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILD-----NMK 250
I R + G ++ A++ G + + D ++L++Y + +GLA+QV DDILD ++
Sbjct: 175 IHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGESDII 234
Query: 251 KKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K D D++TYPKL+G+AGAK+ A+EL A EL P + L +A+F+V+R
Sbjct: 235 GKTVGSDLLADKSTYPKLLGLAGAKQKAQELYQNAIAELESI-PFDTSALRAIAEFVVNR 293
>gi|390959330|ref|YP_006423087.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
gi|390414248|gb|AFL89752.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
Length = 303
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 19/186 (10%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTR--------GVLAGRIMEINSKGKD 189
AL A E +A + + + + + E++ A GT G++ G++M+I +G+
Sbjct: 119 ALQTLAYETLAKLSGDAAAK--IEIVKEVAIATGTGVGSEGLAPGMIGGQVMDIEGEGQK 176
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNM 249
+ ++ I R + G LI S+V G LIGG S +++ LR++G+ GLA+Q+ DDILD
Sbjct: 177 PTAELVEAIHRSKTGALITVSIVAGGLIGGASADEVMHLRRFGQRAGLAFQIVDDILDVT 236
Query: 250 KKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLA 301
+ E G D+AT+P + G+ ++ A EL+ + ELA F RA L +A
Sbjct: 237 QSSAELGKTAGKDTASDKATWPAVFGLDASRETAAELLRDGLAELAGF-GARADALKAVA 295
Query: 302 DFLVSR 307
LV R
Sbjct: 296 KALVER 301
>gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
Length = 298
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 133 LALNRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVS 191
+ + ALL YA ++ K N+ S +++ I + S+ G G++ G++++I S+ K ++
Sbjct: 112 ILIGDALLTYAFYMLSQKNLNLLSFEQITNIISKTSAYAGINGMIGGQMIDIESENKKIN 171
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK 251
L L +I + + GKLI+ + +I G SE+ L +Y + +GLA+QV DDILD
Sbjct: 172 LETLKYIHKHKTGKLIKLPIEIACIIAGVSEDKRLVLEEYAELIGLAFQVKDDILDIEGT 231
Query: 252 KKEAG-----DDE---ATYPKLMGVAGAKRYAKELVAEANQEL-AYFDPTRAAPLYHLAD 302
+E G DD+ ATYP ++G+ +K+ E V A + + F + L LAD
Sbjct: 232 FEELGKPVGSDDDLHKATYPSILGMKESKKILNETVERAKKIIHNMFGEEKGKILISLAD 291
Query: 303 FLVSR 307
F+ R
Sbjct: 292 FIRER 296
>gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|416216022|ref|ZP_11623423.1| geranyltranstransferase [Moraxella catarrhalis 7169]
gi|416220628|ref|ZP_11625552.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
gi|416234051|ref|ZP_11629649.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
gi|416243815|ref|ZP_11634080.1| geranyltranstransferase [Moraxella catarrhalis BC7]
gi|416249216|ref|ZP_11636392.1| geranyltranstransferase [Moraxella catarrhalis CO72]
gi|416256101|ref|ZP_11639521.1| geranyltranstransferase [Moraxella catarrhalis O35E]
gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis BBH18]
gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169]
gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7]
gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E]
gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72]
Length = 348
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C +V G + +++ A + L ++A CY KN + D + + ++ S
Sbjct: 155 TCHIVYGEDVALL----AGDALQSIAFEVLFECY--------DKNSADDAIAYKLAKLLS 202
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKL 228
R V +G++++I + + +S +L+ I R + G LIEA+V+ G + + + L
Sbjct: 203 CRARRMV-SGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYL 261
Query: 229 RKYGKCVGLAYQVWDDIL----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVA 280
+ Y + +GLA+QV DD+L D + K AG DE +TY KL+GV GA+ YA +L
Sbjct: 262 KHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKSTYVKLLGVKGAQEYANQLFE 321
Query: 281 EANQELAYFDPTRAAPLYHLADFLVSR 307
EA ++ Y+ L + D+L +R
Sbjct: 322 EARSQVKYWGDNNL--LLQITDWLQTR 346
>gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
gi|167663987|gb|EDS08117.1| polyprenyl synthetase [Clostridium scindens ATCC 35704]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + L GG + P A EM+ T +L
Sbjct: 62 GKRLRPMLMNETYRLFGGESPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHI 121
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDR---LVRAIGEISSAVGTRGVLAGRIME 182
ALL YA E A K + P+ + RA+G + G G++ G++++
Sbjct: 122 VYGEDMGILAGDALLNYAFE-TAFKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVID 180
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ G + LD I L+ LIEAS++ G ++GG SEE+++ + K + VG+A+Q+
Sbjct: 181 VKETGHSIPKEVLDTIYELKTSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQ 240
Query: 243 DDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
DDILD K+ G +++ TY LMG A A R +EL +A
Sbjct: 241 DDILDVTSTKEVLGKPTHSDEKNEKTTYVTLMGTAEAGRMVEELSDQA 288
>gi|378774240|ref|YP_005176483.1| geranyltranstransferase [Pasteurella multocida 36950]
gi|417855578|ref|ZP_12500682.1| hypothetical protein AAUPMG_03142 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|425065319|ref|ZP_18468439.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida P1059]
gi|338215895|gb|EGP02111.1| hypothetical protein AAUPMG_03142 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|356596788|gb|AET15514.1| geranyltranstransferase [Pasteurella multocida 36950]
gi|404384183|gb|EJZ80626.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida P1059]
Length = 295
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ + ++ + + +S A G +G+ G+ +++ S+ K +SL EL+
Sbjct: 116 ALQAFAFE-ILTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILD-----NMK 250
I R + G ++ A++ G + + D ++L++Y + +GLA+QV DDILD ++
Sbjct: 175 IHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGESDII 234
Query: 251 KKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K D D++TYPKL+G+AGAK+ A+EL A EL P + L +A+F+V+R
Sbjct: 235 GKTVGSDLLADKSTYPKLLGLAGAKQKAQELYQSAIAELESI-PFDTSALRAIAEFVVNR 293
>gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis]
Length = 272
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 41/227 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ + +A G +E +P+ CA EM+ T +L N
Sbjct: 45 GKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 139 LLCYAVEHMATK--------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A +A + VS ++ +R + E+ SA GT G++ G++ ++
Sbjct: 105 VFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
+ + V+L EL+ I + KL+ V+ G ++ EEDIE LR + +G+ +Q+ DD
Sbjct: 165 AGNRQVTLEELESIHERKTSKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEAN 283
ILD +++ G +D++TYP L+ + GAK + EAN
Sbjct: 225 ILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHIKEAN 271
>gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 297
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 100/180 (55%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A + ++++ + VR I ++ A G RG+ G+ +++ ++ V+L+EL+
Sbjct: 118 ALQSFAFELIA-QDESLTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAELEL 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + LI ASV+ G + S+ K L +Y + +GLA+QV DDILD + K
Sbjct: 177 IHRNKTSALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETDKI 236
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G DE +TYPKL+G+ GA++ A++L A L P L LA F+V R
Sbjct: 237 GKTVGSDENLHKSTYPKLLGLEGAQQKAQDLYQTALNALEEL-PFDTTALKELAHFIVKR 295
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 128 EMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
E L LA ALL A E +AT KNV + ++ I E+S A G G++ G+++++ S+
Sbjct: 106 EALAILA-GDALLTMAFEIIATD-KNVDAETKIKIITEMSKAAGAEGMVGGQVIDMQSEN 163
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
K + + L + + G L A++ G ++ G E+ + L +Y + GLA+Q+ DDILD
Sbjct: 164 KKIDIQTLKQMHAAKTGALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILD 223
Query: 248 NMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
+ +K G DE +TY L + AK A+E V +A L F A L
Sbjct: 224 VVGDEKTIGKPVGSDEKNHKSTYVTLGSLGSAKALAQEAVDKAKASLVDFGEN-AEFLRA 282
Query: 300 LADFLVSRHK 309
L D+L++R+K
Sbjct: 283 LVDYLITRNK 292
>gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401]
gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 5 str. 8401]
Length = 299
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 13/168 (7%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQ---ELAYFDPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q +LA P +A L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSPDTSA-LEALADYIIQRNK 299
>gi|433284426|emb|CCO06628.1| geranyltranstransferase [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 322
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 56/268 (20%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + G + +P AC+ EM+ T +L
Sbjct: 55 GKRLRPILAMAAAQATGKDFRLALPAACSIEMIHTYSLIHDDLPAMDNDDLRRGIPTCHK 114
Query: 136 ----------NRALLCYAVEHMATKTKNV-----SPDRLVRAIGEISSAVGTRGVLAGRI 180
ALL +A + + + + + L + + IS A G G++ G++
Sbjct: 115 AFSEATAILAGDALLTHAFTILTHNPRAMFDPCPNDEILFKLVAMISRAAGAHGMVEGQM 174
Query: 181 MEINSKGK-----------DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLR 229
M++ + G D L+ L + L+ GK+I SV G L G + IE+L
Sbjct: 175 MDMQATGFLDQHNQSKVNIDNCLAHLKKLHELKTGKMIVVSVESGALSAGADPDQIERLA 234
Query: 230 KYGKCVGLAYQVWDDIL----DNMKKKKEAGDD----EATYPKLMGVAGAKRYAKELVAE 281
KY VGLA+QV DDIL D K AG D + T+P L+G+ ++ +A+ L+ E
Sbjct: 235 KYAGKVGLAFQVADDILNVEGDPYVMGKAAGSDAMNNKMTFPALLGLEPSRTFARNLIQE 294
Query: 282 ANQELAYFDPTRAAPLYHLADFLVSRHK 309
A + L F+ PL +A ++V R +
Sbjct: 295 ALEPLNTFNEKDILPLKAIAGYIVDRKR 322
>gi|383310173|ref|YP_005362983.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. HN06]
gi|386834349|ref|YP_006239664.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. 3480]
gi|380871445|gb|AFF23812.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. HN06]
gi|385201050|gb|AFI45905.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. 3480]
Length = 295
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ + ++ + + +S A G +G+ G+ +++ S+ K +SL EL+
Sbjct: 116 ALQAFAFE-ILTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILD-----NMK 250
I R + G ++ A++ G + + D ++L++Y + +GLA+QV DDILD ++
Sbjct: 175 IHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGESDII 234
Query: 251 KKKEAGD---DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K D D++TYPKL+G+AGAK+ A+EL A EL P + L +A+F+V+R
Sbjct: 235 GKTVGSDLLADKSTYPKLLGLAGAKQKAQELYQNAIAELESI-PFDTSALRAIAEFVVNR 293
>gi|434382488|ref|YP_006704271.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
gi|404431137|emb|CCG57183.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
Length = 295
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 54/297 (18%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM ++ K I+ + F+ +++ L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLENNFLDMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
L G+ + A + E++ T +L L
Sbjct: 59 LFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
++ E ++ NV+ L + + EIS A G G++ G+ +++ + +D+ L +
Sbjct: 119 FTHSFEILSNA--NVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILH 176
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEA 255
+ G +I +V G + ++E + KYG+ +GLA+Q+ DDIL DN K
Sbjct: 177 SKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 236
Query: 256 GDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP-LYHLADFLVSR 307
G DE TY K G+ GAK A E EA L +D A L LA+++V R
Sbjct: 237 GKDEKEGKLTYVKQFGLEGAKEKAMETSKEAIDYLNVYDDNEAKNILIELANYIVER 293
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 100/178 (56%), Gaps = 12/178 (6%)
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVS-LSELDF 197
LL A E +AT+ N + + + +++SA G G++ G+ ++ ++ V+ L+EL+
Sbjct: 142 LLTRAFEVLATEISN--KELALACVADLASAAGWCGMVGGQAADLAAETTPVTTLAELEQ 199
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NM 249
I + G+L+ ++ G +GG S + +E L +YG +GLA+Q+ DD+LD
Sbjct: 200 IHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVEGSSEKLGK 259
Query: 250 KKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ +K+A +ATYP +GV ++ A +LV +A +EL F P R L LA +++ R
Sbjct: 260 QTQKDAQAGKATYPGFLGVEASRERAADLVKQACRELEVFGP-RGQWLSDLALYIIER 316
>gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227]
gi|416296116|ref|ZP_11651322.1| geranyltranstransferase [Shigella flexneri CDC 796-83]
gi|417680573|ref|ZP_12329958.1| geranyltranstransferase [Shigella boydii 3594-74]
gi|420324026|ref|ZP_14825812.1| farnesyl diphosphate synthase [Shigella flexneri CCH060]
gi|420351189|ref|ZP_14852388.1| farnesyl diphosphate synthase [Shigella boydii 4444-74]
gi|421681121|ref|ZP_16120951.1| geranyltranstransferase [Shigella flexneri 1485-80]
gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227]
gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83]
gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74]
gi|391256916|gb|EIQ16038.1| farnesyl diphosphate synthase [Shigella flexneri CCH060]
gi|391289044|gb|EIQ47540.1| farnesyl diphosphate synthase [Shigella boydii 4444-74]
gi|404341869|gb|EJZ68271.1| geranyltranstransferase [Shigella flexneri 1485-80]
Length = 299
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 13/168 (7%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQ---ELAYFDPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q +LA P +A L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSPDTSA-LEALADYIIQRNK 299
>gi|373106594|ref|ZP_09520896.1| hypothetical protein HMPREF9623_00560 [Stomatobaculum longum]
gi|371652288|gb|EHO17706.1| hypothetical protein HMPREF9623_00560 [Stomatobaculum longum]
Length = 298
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 156 PDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGV 215
P+R RA+ + G G+L G+ +++ G+ + + LDFI RL+ G L+EA+ + G
Sbjct: 138 PERAARALAILGEKSGVGGMLGGQSVDVEKTGEHLDATTLDFIYRLKTGALLEAAFMMGA 197
Query: 216 LIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMG 267
+GG SE +I + G+ VGLA+Q+ DDILD + E G + + TY L G
Sbjct: 198 ALGGASEAEISCAEQIGRAVGLAFQIQDDILDETATEAELGKPLHSDEKNQKTTYVSLFG 257
Query: 268 VAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+ A+ ++ A Q L F P L L +L R
Sbjct: 258 LEAAREAVRQQSEAAEQRLREF-PGETETLAALIAYLTDRR 297
>gi|399522387|ref|ZP_10763051.1| farnesyl-diphosphate synthase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109821|emb|CCH39612.1| farnesyl-diphosphate synthase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 295
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 113/252 (44%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+ ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALEGDLERADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
L A E +A +N + ++ I +S A G G++ G+ +++
Sbjct: 103 AFDEASAILAGDGLQSLAFEVLADHRRNPQDAETRLQMIELLSQAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEK-LRKYGKCVGLAYQVWD 243
S G+ + L+ + R + G LIEASV G L G +E K L +Y + +GLA+QV D
Sbjct: 163 SVGRRLDQQALEVMHRHKTGALIEASVALGALASGNIDELAHKALLQYARAIGLAFQVQD 222
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K G DEA TYP L+G+ AK YA EL +A L F + A
Sbjct: 223 DILDVESDTATLGKTQGKDEAHDKPTYPALLGLDAAKDYALELRDQALHVLCPFGNS-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+RV L A+ ELV + V +A A E++
Sbjct: 46 GKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHV 105
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L +L A E +A K P+ ++ I +++ A G+RG+ G+ +++S
Sbjct: 106 EYDEATALLTGDSLQTLAFELLAEKPLADIPETQLQMIAQLALASGSRGMAGGQAFDLDS 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDD 244
GK +SL EL+F+ + G LI A+V+ G ++E + +L + KCVGLA+QV DD
Sbjct: 166 VGKMLSLPELEFMHIHKTGALIRAAVMLGARCSSCLNDEQLAQLDHFAKCVGLAFQVVDD 225
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K AG D + TY ++GV+ A+ A++L +A Q L F+ A
Sbjct: 226 LLDTEATTATLGKTAGKDAEHNKPTYVSILGVSQARELAEKLQHDAYQALDGFNEA-ALR 284
Query: 297 LYHLADFLVSR 307
L + DF++ R
Sbjct: 285 LRQVTDFIIKR 295
>gi|62959237|gb|AAY23726.1| farnesyl diphosphate synthase [Bacillus sp. JL-537]
Length = 145
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Query: 131 VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-D 189
+T+ ALL YA E++A +T ++ +RL++ I + AVG G++ G++ ++ S+GK D
Sbjct: 27 ITILAGDALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVADLESEGKTD 85
Query: 190 VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
VS+ L+FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 86 VSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|335031389|ref|ZP_08524830.1| geranyltranstransferase [Streptococcus anginosus SK52 = DSM 20563]
gi|333769793|gb|EGL46883.1| geranyltranstransferase [Streptococcus anginosus SK52 = DSM 20563]
Length = 300
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 8/130 (6%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V I E+S A GT G++ G+++++ +GKD+SL+EL I + GKL+ + LI
Sbjct: 132 VNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQNIHVNKTGKLLTYPFIAAGLIAE 191
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILD---NMKK-----KKEAGDDEATYPKLMGVAGA 271
++ EKLRK G+ +GLA+QV DDILD N + +K+ ++ATYP + G+ GA
Sbjct: 192 VAQPQQEKLRKIGQLLGLAFQVRDDILDITANFEDLGKTPQKDVAAEKATYPAIWGLDGA 251
Query: 272 KRYAKELVAE 281
KR+ ++ + E
Sbjct: 252 KRFFEKQIEE 261
>gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125]
gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125]
Length = 294
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 46/252 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + + S + LACA EM+ T +L
Sbjct: 45 GKRIRPALLLATMKSFQKDISQGIDLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL Y+ E + K K V P + + I E++ A G G++ G++ +I
Sbjct: 105 VFGEAHAILAGDALLTYSFE-IVAKMKGVDPAKTLCLIEELARAAGPEGMVGGQVADIEG 163
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ + +++ L++I + G L+ ++V G + SE+DIE +R++ + +GL +Q+ DDI
Sbjct: 164 ENQKLTVEGLEYIHHHKTGALLSFAIVAGARLADASEQDIENIRRFSRELGLLFQIKDDI 223
Query: 246 LDNMKKK--------KEAGDDEATYPKLMGVAGAKR--YAKELVAEANQELAYFDPTRAA 295
LD + + G+ ++TYP L+ + GAK + L+A +E Y
Sbjct: 224 LDVEGDQAAIGKPVGSDDGNQKSTYPSLLTLEGAKEKLHLHTLLA---KEYLYSVQMNHR 280
Query: 296 PLYHLADFLVSR 307
L L D++V+R
Sbjct: 281 LLEELTDYVVNR 292
>gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202]
gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202]
Length = 299
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 103/183 (56%), Gaps = 18/183 (9%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
+L +A E +A K ++ + V+ I ++ A G RG+ G+ +++ S+ K +SLSEL+
Sbjct: 120 SLQTFAFELIA-KDPFLTDLQKVKQIQSLAQAAGARGMCLGQSLDLISENKAISLSELEL 178
Query: 198 IKRLRCGKLIEASVVCGV-LIGGGSEEDIEK-LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI ASV+ G L +E I+ L Y K +GLA+QV DDILD + K
Sbjct: 179 IHRNKTGALIVASVLMGFNLSDYARDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDKI 238
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVA---EANQELAYFDPTRAAPLYHLADFL 304
K AG DE +TYPKL+G+ GA A+ L EA EL + TRA L LA F+
Sbjct: 239 GKTAGSDESLNKSTYPKLLGLEGAMEKAQSLYQTSLEALDELPF--DTRA--LKALAHFI 294
Query: 305 VSR 307
+ R
Sbjct: 295 IQR 297
>gi|403070078|ref|ZP_10911410.1| geranyltranstransferase [Oceanobacillus sp. Ndiop]
Length = 294
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 59/294 (20%)
Query: 63 IDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGNESSV 120
I++Y + K+ N L E +P L+ L + E G+R+ L IAS + S V
Sbjct: 9 INQYKEVIQKEFNHCL-ENMDIPQQLKSSMLYSLEAGGKRLRPVLLIASYQAYQNEVSKV 67
Query: 121 MPLACAAEMLVTLAL--------------------------------NRALLCYAVEHMA 148
+ A A EM+ T +L ALL Y+ E +
Sbjct: 68 ISTAAALEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKAFNEATAILAGDALLTYSFE-LI 126
Query: 149 TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIE 208
T ++S V I ++S G G++ G+I+++ ++ + VSL ++ I L+ +L++
Sbjct: 127 TNDPSLSDREKVTIIKMLASCSGPSGMVGGQILDMEAENQPVSLDAMERIHALKTSELLK 186
Query: 209 ASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDE----A 260
++ G +G +EE + L+ + +GL +QV DDILD K K G DE +
Sbjct: 187 FAIYTGAYLGKATEEQLAHLKTFAYYLGLIFQVQDDILDVTGEQEKLGKPVGSDEGNRKS 246
Query: 261 TYPKLMGVAGA----KRY---AKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYPKL+GVAGA ++Y AKE + +A + +Y L L D+ +R
Sbjct: 247 TYPKLLGVAGAVEQKEKYAIKAKESLMKAGAQDSY--------LMDLTDYFSTR 292
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 45/256 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L + +C + GG+E +P ACA EM+ T +L
Sbjct: 55 GKRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPAMDNDDLRRGEPTNHK 114
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEIS---SAVGTRGVLAGRIME 182
ALL AVE + + P R I +S A G G++ G+ +
Sbjct: 115 VYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSLLMRAAGVNGMIGGQTGD 174
Query: 183 INSKGKD-VSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQV 241
+ ++ D ++ ++ +I + G L+ A+V+ G ++ G SE++ + LR YG +G+A+QV
Sbjct: 175 LLAEDDDAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQALRNYGSAIGMAFQV 234
Query: 242 WDDILDNMKKK--------KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTR 293
DDILD + +A + + T+ L G+ AK A+E EA LA
Sbjct: 235 VDDILDVESETAVLGKPVGSDAEESKTTFVSLFGLESAKVKAEEYHQEAIAALAGI-QRD 293
Query: 294 AAPLYHLADFLVSRHK 309
L +ADF+ R++
Sbjct: 294 TIFLEEMADFICRRNR 309
>gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
Length = 294
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 138 ALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELD 196
ALL YA+E A + + R+ + IG ++ G G++ G+ +++ K + +LD
Sbjct: 115 ALLIYAIETAARAFQMTDNAQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLD 174
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
FI RL+ G L+EA++V G ++ G S+E+ E + + +GLA+Q+ DDILD ++ G
Sbjct: 175 FIYRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQEVLG 234
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+++ TY L G+ AKR ++L +E ++ Y P L L LVSR
Sbjct: 235 KPVLSDEKNNKTTYVSLEGIEKAKRDVEKL-SETAVDILYSLPGSNDFLEDLIKVLVSRE 293
Query: 309 K 309
K
Sbjct: 294 K 294
>gi|449094925|ref|YP_007427416.1| hypothetical protein C663_2310 [Bacillus subtilis XF-1]
gi|449028840|gb|AGE64079.1| hypothetical protein C663_2310 [Bacillus subtilis XF-1]
Length = 249
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 90/165 (54%), Gaps = 9/165 (5%)
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEAS 210
+ VS ++ +R + E+ SA GT G++ G++ ++ ++ + V+L EL+ I + KL+
Sbjct: 84 SDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFC 143
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATY 262
V+ G ++ EEDIE LR + +G+ +Q+ DDILD +++ G +D++TY
Sbjct: 144 VIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTY 203
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
P L+ + GAK + EA + + + LY L D + +R
Sbjct: 204 PSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL-LYELCDLIAAR 247
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 42/250 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VG + + ACA EM+ T +L
Sbjct: 49 GKRLRPILLMAAADAVGAKGTDYLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHK 108
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E + + ++ P L+R + EIS+A G G++ G+ +++ S
Sbjct: 109 VFGDGMAVLAGDALLTLAFEVIG-RQQHTDPATLLRTVQEISTAAGMNGMVGGQAIDLES 167
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G +S+ +L + + G L A++ G ++ G SE+ + L Y + GLA+Q+ DDI
Sbjct: 168 EGHRISMEQLRKMHMGKTGALFRAALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDI 227
Query: 246 LDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K G D ++TY L + A+R AKE V A L F P A L
Sbjct: 228 LDVTGDEALIGKPVGSDLRNEKSTYVTLTSLEEAQRLAKETVDAAVAALDGFGP-EADFL 286
Query: 298 YHLADFLVSR 307
L +++ R
Sbjct: 287 RQLVRYMLER 296
>gi|389818539|ref|ZP_10208820.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
gi|388463822|gb|EIM06165.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL Y+ + + ++VS D VR + +S + G G++ G++++I + K ++L EL+
Sbjct: 116 ALLTYSF-GIVARLQHVSSDDKVRLMDLMSVSSGAEGMVGGQVLDIEGEEKKLTLEELEQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKK 253
+ RL+ G L+ S++ G ++ S E+I L ++G+ +GLA+Q+ DDILD + + K
Sbjct: 175 VHRLKTGALLTYSILAGGILAQASNEEILALSRFGEHIGLAFQIQDDILDVTGTSQELGK 234
Query: 254 EAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
AG DE +TYP L+ + AK + +EA L +A L L +V R
Sbjct: 235 TAGKDESSEKSTYPGLLTLPKAKEKLEFHASEAINALQSLKGEKAL-LMQLTQLIVQR 291
>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|384160080|ref|YP_005542153.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|384165005|ref|YP_005546384.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|384169144|ref|YP_005550522.1| geranyltranstransferase [Bacillus amyloliquefaciens XH7]
gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|341828423|gb|AEK89674.1| putative geranyltranstransferase [Bacillus amyloliquefaciens XH7]
Length = 296
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ + +A G +E +P+ CA EM+ T +L N
Sbjct: 45 GKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHK 104
Query: 139 LLCYAVEHMATK--------------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
+ A +A ++ VS ++ +R + E+ SA GT G++ G+ ++
Sbjct: 105 VFGEAAAVLAGDGLLTESFKLITSHVSEEVSAEKRLRLVDELISAAGTEGMVGGQAADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ K V+L EL+ I + KL+ SV G ++ E++IEKLR + +G+ +Q+ DD
Sbjct: 165 AEQKQVTLKELESIHERKTAKLLGFSVTAGAILADAPEDEIEKLRLFSSHIGIGFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +++ G ++++TYP L+ + GAK ++EA Q ++ +
Sbjct: 225 ILDIEGHEEKIGKPVGSDTTNEKSTYPSLLTLEGAKEKLAHHISEAKQIVSGLSLEKEL- 283
Query: 297 LYHLADFLVSR 307
L+ L D + +R
Sbjct: 284 LHDLCDLIAAR 294
>gi|355624222|ref|ZP_09047583.1| hypothetical protein HMPREF1020_01662 [Clostridium sp. 7_3_54FAA]
gi|354821983|gb|EHF06358.1| hypothetical protein HMPREF1020_01662 [Clostridium sp. 7_3_54FAA]
Length = 294
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 138 ALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELD 196
ALL YA+E A + + R+ + IG ++ G G++ G+ +++ K + +LD
Sbjct: 115 ALLIYAIETAARAFQMTDNAQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLD 174
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
FI RL+ G L+EA++V G ++ G S+E+ E + + +GLA+Q+ DDILD ++ G
Sbjct: 175 FIYRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQEVLG 234
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+++ TY L G+ AKR ++L +E ++ Y P L L LVSR
Sbjct: 235 KPVLSDEKNNKTTYVSLEGIEKAKRDVEKL-SETAVDILYSLPGSNDFLEDLIKVLVSRE 293
Query: 309 K 309
K
Sbjct: 294 K 294
>gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
Length = 295
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 115/252 (45%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE + G+ ACA E++ +L
Sbjct: 43 GKRVRPLLVYAACEALEGDIERADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
AL A +A + +N + + ++ + +S A G G++ G+ +++
Sbjct: 103 AFDEASAILAGDALQSLAFGVLADRRRNPQNTETRLQMVELLSQAAGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEK-LRKYGKCVGLAYQVWD 243
S G + L+ + R + G LIEASV G L G ++E K L +Y + +GLA+QV D
Sbjct: 163 SVGLQLDQQALEIMHRHKTGALIEASVALGALASGNTDELARKALLQYSRAIGLAFQVQD 222
Query: 244 DIL----DNMKKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DIL D K G DEA TYP L+G+ AK YA EL +A L F + A
Sbjct: 223 DILDVESDTATLGKTQGKDEAHDKPTYPALLGLDAAKDYALELRDQALHVLRPFGNS-AE 281
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 282 PLRELARYIVER 293
>gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
Length = 294
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 138 ALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELD 196
ALL YA+E A + + R+ + IG ++ G G++ G+ +++ K + +LD
Sbjct: 115 ALLIYAIETAARAFQMTDNSQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLD 174
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
FI RL+ G L+EA++V G ++ G S+E+ E + + +GLA+Q+ DDILD ++ G
Sbjct: 175 FIYRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQEVLG 234
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
+++ TY L G+ AKR ++L +E ++ Y P L L LVSR
Sbjct: 235 KPVLSDEKNNKTTYVSLEGIEKAKRDVEKL-SETAVDILYSLPGSNDFLEDLIKVLVSRE 293
Query: 309 K 309
K
Sbjct: 294 K 294
>gi|445063263|ref|ZP_21375494.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
gi|444505355|gb|ELV05886.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
Length = 294
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 57/298 (19%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM ++ ++INK + F+ +++ L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNVRLEEINKTIDNVFDKSSIELENSFIEMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGN-ESSVMPLACAAEMLVTLAL--------------------------------NRA 138
+ G+ + S++P A A E++ T +L
Sbjct: 59 IFEGDYKKSIIP-AVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDG 117
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
LL +A + ++ +V L + + E+S A G G++ G+ +++ + K+++ L +
Sbjct: 118 LLTHAFQLLSKA--DVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKIL 175
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKE 254
+ G +I +V G I ++ DIE + KY + VGLA+Q+ DDIL DN K
Sbjct: 176 HAKKTGAMIRGAVRLGA-ISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKT 234
Query: 255 AGDDEA----TYPKLMGVAGAKRYAKELVAEANQELA-YFDPTRAAPLYHLADFLVSR 307
G DE TY K G+ GAK+ AK++ +A + L Y D L LA++++ R
Sbjct: 235 VGKDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYIIER 292
>gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 303
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 21/170 (12%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL + E++ A G G+ G+ ++ ++G V L+ L+ I R + G LI A+V G L
Sbjct: 138 DRLA-MLSELAHASGVAGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGAL 196
Query: 217 IGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + D + L +Y +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 197 AAGETGRDALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLG 256
Query: 268 VAGAKRYAKELVAEANQELAYFD--------PTRAAPLYHLADFLVSRHK 309
+ A++ A+EL E+ LA D P APL LA+F+V R K
Sbjct: 257 LDNARKKAQELYQES---LASLDDLVASSSIPLNIAPLQALANFIVERDK 303
>gi|336421588|ref|ZP_08601745.1| hypothetical protein HMPREF0993_01122 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000472|gb|EGN30622.1| hypothetical protein HMPREF0993_01122 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + L GG + P A EM+ T +L
Sbjct: 62 GKRLRPMLMNETYRLFGGEGPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHI 121
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDR---LVRAIGEISSAVGTRGVLAGRIME 182
ALL YA E A K + P+ + RA+G + G G++ G++++
Sbjct: 122 VYGEDMGILAGDALLNYAFE-TAFKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVID 180
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ G + LD I L+ LIEAS++ G ++GG SEE+++ + K + VG+A+Q+
Sbjct: 181 VKETGHSIPKEVLDTIYELKTSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQ 240
Query: 243 DDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
DDILD K+ G +++ TY LMG A A R +EL +A
Sbjct: 241 DDILDVTSTKEVLGKPTHSDEKNEKTTYVTLMGTAEAGRMVEELSDQA 288
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL +A E +A KT +S + +R I ++ A G G++ G+++++ ++ K ++
Sbjct: 122 ALLTFAFEIIAHKTSELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITT 181
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----K 253
++ ++ LI + G +IG S+E EKL +G +GLA+Q+ DD+LD K
Sbjct: 182 LQHMKTATLISFACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASTKVLGK 241
Query: 254 EAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
AG DE AT+ +L G+ ++ EL+A+A L F +A PL A F +R
Sbjct: 242 TAGKDETAHKATFIRLYGIEETQKKRDELIAQAEALLLPFGA-KATPLQQAARFSATR 298
>gi|337286891|ref|YP_004626364.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
gi|335359719|gb|AEH45400.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
Length = 300
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 135/299 (45%), Gaps = 55/299 (18%)
Query: 61 IQIDEYMTLKAKK--INKAL------FEGAAVPLI--LQYPTLPNHEGERVHGTLCIASC 110
+ D + LK+K+ +N+AL +G A L + Y + G+R+ L +A
Sbjct: 3 LSADFFDWLKSKQELVNRALEFYVPYLDGQARRLFEAMHYSLMSG--GKRLRPILVMAGA 60
Query: 111 ELVGGNESSVMPLACAAEMLVTLAL--------------------------------NRA 138
E GG V+P ACA E + T +L
Sbjct: 61 EAAGGKPEDVLPAACAIECIHTYSLIHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDG 120
Query: 139 LLCYAVEHMATK--TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELD 196
LL +A +A + + L+ I ++ A G G++AG++ ++ ++G++V+ EL
Sbjct: 121 LLTHAFRLLAHEELADKFPQENLLEGIRLVAEAAGLYGMVAGQMADLLAEGRNVTAEELA 180
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
FI R + LI ASV+ G + G +++ E L YG +G A+Q+ DDILD +K G
Sbjct: 181 FIHRHKTAALIRASVLLGATLVGTGKKEKEALSSYGWNIGHAFQIIDDILDLTADEKTLG 240
Query: 257 --------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ATYP L G+ ++ A+ L+ EA +A +A L +A +++ R
Sbjct: 241 KPIGSDLKKKKATYPALFGLEASRAKARSLLEEALSSIAILGD-KAKTLADIAYYVLER 298
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 145/299 (48%), Gaps = 57/299 (19%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM ++ ++INK + F+ + + L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNIRLEEINKTIDNVFDKSDIELENSFIEMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGN-ESSVMPLACAAEMLVTLAL--------------------------------NRA 138
L G+ + S++P A A E++ T +L
Sbjct: 59 LFNGDYKKSIIP-AVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDG 117
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
LL +A + + +KT +V L + + E+S A G G++ G+ +++ + K+++ L +
Sbjct: 118 LLTHAFQ-LLSKT-DVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKIL 175
Query: 199 KRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKK 253
+ G +I ++ G + ++ DIE + KYG+ +GLA+Q+ DDIL DN K
Sbjct: 176 HAKKTGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGK 235
Query: 254 EAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP-LYHLADFLVSR 307
G DE TY K G+ GAK AK+++ ++ + L + + A L LA++++ R
Sbjct: 236 TVGKDEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKESEAKNILIELANYIIER 294
>gi|375085374|ref|ZP_09732017.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
gi|374567392|gb|EHR38611.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
Length = 292
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 128 EMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKG 187
E L LA ALL A E +AT KNV + V+ I E+S A G G++ G+++++ S+
Sbjct: 106 EALAILA-GDALLTMAFEIIATD-KNVDAETKVKIITEMSKAAGAEGMVGGQVIDMQSEN 163
Query: 188 KDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
K + + L + + G L A++ G ++ G E+ + L +Y + GLA+Q+ DD+LD
Sbjct: 164 KKIDIQTLKQMHAAKTGALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDVLD 223
Query: 248 NMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYH 299
+ +K G DE +TY L + AK A+E V +A L F A L
Sbjct: 224 VVGDEKTIGKPVGSDEKNHKSTYVTLGSLESAKALAQEAVDKAKASLVDFGEN-AEFLRA 282
Query: 300 LADFLVSRHK 309
L D+L++R+K
Sbjct: 283 LVDYLITRNK 292
>gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 295
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E +A S V+ I ++ A G G++ G+ ++I + K +++ EL
Sbjct: 116 ALQTLAFELIANHKFTCSSQTQVKMIATLAHASGLEGMVGGQGLDIAATDKVITVQELAR 175
Query: 198 IKRLRCGKLIEASVVCGVLIG-GGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKK 252
I +L+ G LI ++ G L ++ +E L +G +GLA+QV DDILD +
Sbjct: 176 IHKLKTGALINCAITLGALCSEKADQQTLENLSIFGYAIGLAFQVHDDILDVEGDTVTLG 235
Query: 253 KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G D +ATYP L+G+ GAK A+ L+ +A++ LA D L LA++L+ R
Sbjct: 236 KPQGSDIAANKATYPALLGMLGAKEKAQNLIQQAHEALANIDAD-TTLLASLANYLIER 293
>gi|440288783|ref|YP_007341548.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
strain FGI 57]
gi|440048305|gb|AGB79363.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
strain FGI 57]
Length = 299
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISS 168
+C + G ++++ A + L TLA +++ A T DRL + E++
Sbjct: 100 TCHIKFGEANAIL----AGDALQTLA-------FSILSDAPMTNVSDRDRLA-MVSELAQ 147
Query: 169 AVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG-GSEEDIEK 227
A G G+ G+ ++++++GK V L+ L+ I R + G LI A+V G L G +
Sbjct: 148 ASGVAGMCGGQALDLDAEGKHVDLAALERIHRHKTGALIRAAVRLGALSAGEKGRSALPL 207
Query: 228 LRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMGVAGAKRYAKELV 279
L KY +C+GLA+QV DDILD + K++ D + +TYP L+G+ A+ A++L+
Sbjct: 208 LDKYAECIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARTKARDLI 267
Query: 280 AEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
EA Q L L LA++++ R K
Sbjct: 268 EEARQSLTELAAQSLDTTALEALANYIILRDK 299
>gi|62959213|gb|AAY23714.1| farnesyl diphosphate synthase [Synechococcus sp. WH 5701]
Length = 145
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T ++ +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L+E V G ++ G E+++ L +Y + +GLA+QV DDILD
Sbjct: 93 FIHTHKTGALLEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQVVDDILD 143
>gi|403057503|ref|YP_006645720.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804829|gb|AFR02467.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 303
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 21/170 (12%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL + E++ A G G+ G+ ++ ++G V L+ L+ I R + G LI A+V G L
Sbjct: 138 DRLAM-LSELAHASGVAGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGAL 196
Query: 217 IGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + D + L +Y +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 197 AAGEAGRDALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLG 256
Query: 268 VAGAKRYAKELVAEANQELAYFD--------PTRAAPLYHLADFLVSRHK 309
+ A++ A+EL E+ LA D P APL LA+F+V R K
Sbjct: 257 LDNARKKAQELYQES---LASLDDLVASSSIPLNIAPLQALANFIVERDK 303
>gi|374703984|ref|ZP_09710854.1| farnesyl-diphosphate synthase [Pseudomonas sp. S9]
Length = 295
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 47/254 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GGN ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGNVEHANGAACAVELIHAYSLVHDDLPAMDDDDLRRGKPTTHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRA-IGEISSAVGTRGVLAGRIMEIN 184
L A E + N L A I ++ A G G++ G+ +++
Sbjct: 103 AFDEAAAILAGDGLQTLAFEVLGNAELNPHSAGLRLAMIATLARASGPAGMVGGQAIDLG 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWD 243
S G+ + + L+ + R + G LIEASV G L G ++ + L++Y + +GLA+QV D
Sbjct: 163 SVGQALDQAALENMHRHKTGALIEASVALGALASGNADPATLAALQRYAQAIGLAFQVQD 222
Query: 244 DILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDP--TR 293
DILD + K+ +D+ TYP ++G+ AK YA EL +Q LA + +
Sbjct: 223 DILDIESDTHTLGKTQGKDQANDKPTYPAILGLQNAKGYALEL---RDQALAALEDLGSP 279
Query: 294 AAPLYHLADFLVSR 307
A PL LA ++V R
Sbjct: 280 AEPLRMLARYIVER 293
>gi|358636220|dbj|BAL23517.1| polyprenyl synthetase [Azoarcus sp. KH32C]
Length = 298
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+RV L A+ L G + + + +ACA E++
Sbjct: 47 GKRVRPLLVHAAGRLAGADPARLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHV 106
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L + AL A + +A +P + I + A G+RG+ G+ +++ +
Sbjct: 107 EYDEATALLVGDALQALAFQVLADTPLAATPAVQLEMIALLGRASGSRGMAGGQAIDLGA 166
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDD 244
GK ++ EL+F+ + G LI ASV+ G G E + L YGK VGL +QV DD
Sbjct: 167 VGKQLTREELEFMHIHKTGALIRASVLLGAQCGDALPAEQLAPLDHYGKVVGLLFQVVDD 226
Query: 245 ILDNMKKK--------KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K+A ++ TY L+G++ A+ ++ L+A A + L+ F P A
Sbjct: 227 ILDAQADTATLGKTAGKDADQNKPTYVTLLGMSEARTLSESLLANAQEALSSFGPG-AVR 285
Query: 297 LYHLADFLVSR 307
L LA+F+V R
Sbjct: 286 LAELANFIVHR 296
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 139 LLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
LL Y+ E +A T +VS ++L+R + ++ + G G++ G+ ++ + + +S+ EL++I
Sbjct: 119 LLTYSFEVLAG-TPDVSAEKLIRLVSLLAKSAGPEGMVGGQAADMEGESQSLSVEELEYI 177
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKE 254
+ + G+L+ SV+ ++ +EE I L +Y +GLA+Q+ DDILD K K
Sbjct: 178 HKNKTGRLLAFSVMAAAILADSTEEQISLLEEYAFHIGLAFQIQDDILDVEGSEEKIGKP 237
Query: 255 AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G DE +TYP L+ + GAK + + + LA D L +AD + SR
Sbjct: 238 VGSDENKFKSTYPALLTLEGAKEKLRNHLQKGKSALAASDLDNGL-LVEIADMIASR 293
>gi|419022572|ref|ZP_13569814.1| farnesyl diphosphate synthase [Escherichia coli DEC2A]
gi|377868210|gb|EHU32954.1| farnesyl diphosphate synthase [Escherichia coli DEC2A]
Length = 299
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354]
gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354]
Length = 299
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L +++ A K DR + I E++SA G G+ G+ ++++++GK V L L+ I
Sbjct: 120 LAFSILSDADMPKVSDRDR-ISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIH 178
Query: 200 RLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KK 253
R + G LI A+V G L G + L KY + +GLA+QV DDILD + K+
Sbjct: 179 RHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKR 238
Query: 254 EAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRH 308
+ D + +TYP L+G+ A++ A++L+ +A Q L + L LAD+++ R+
Sbjct: 239 QGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRN 298
Query: 309 K 309
K
Sbjct: 299 K 299
>gi|421524820|ref|ZP_15971441.1| polyprenyl synthetase [Pseudomonas putida LS46]
gi|402751283|gb|EJX11796.1| polyprenyl synthetase [Pseudomonas putida LS46]
Length = 295
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-D 224
++ A G G++ G+ +++ S G+ + L+F+ R + G LIEASV G L +E+
Sbjct: 144 LAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEQAQ 203
Query: 225 IEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAK 276
++ L+ Y + +GLA+QV DDILD + K++ A D+ TYP L+G+ AK YA
Sbjct: 204 LDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAI 263
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
EL +A L F T A PL LA ++V R
Sbjct: 264 ELRDQALAALQGFGET-AEPLRALARYIVERR 294
>gi|395788008|ref|ZP_10467584.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
gi|395409790|gb|EJF76375.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
Length = 300
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL +A E +A K +S D ++ I ++ A G G++ G++++I ++ K ++
Sbjct: 122 ALLTFAFETIAHKACTLSFDTKIKLITALAQASGLGGMIGGQMLDIEAEKKLQKSKDIIT 181
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----K 253
++R++ LI + G LI S+E EKL +G +GLA+Q+ DD+LD K
Sbjct: 182 LQRMKTAALISFACQAGALIANASKELTEKLATFGTYLGLAFQLTDDLLDFTTSSEVLGK 241
Query: 254 EAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
AG DE AT+ +L G+ ++ E +A+A L F +A PL H A F +R
Sbjct: 242 TAGKDESAQKATFVRLYGIEETQKKRDEFIAKAETLLLPFGA-KAKPLLHAAHFSATR 298
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 40/251 (15%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL-------------------NRA 138
G+R+ L +A+ + VGG+ + + +ACA EM+ T +L N
Sbjct: 42 GKRLRPVLLMAAADAVGGDGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHK 101
Query: 139 LLCYAVEHMA------------TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSK 186
+ + +A + ++VS D L+R + EIS A G G++ G+++++ ++
Sbjct: 102 VFGDGIAILAGDGLLTLAFTVILRQQDVSADTLLRVVDEISRAAGAEGMVGGQVLDLRAE 161
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
+S+ E+ + + G L A++ G ++GG SE + L Y + GLA+Q+ DDIL
Sbjct: 162 EHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLASLTTYAEQFGLAFQITDDIL 221
Query: 247 DNMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + ++ G DE +TY L + A+ A + V +A L F A L
Sbjct: 222 DVVGTAEDIGKPVGSDEKNHKSTYVSLTSLDEAQELAAQTVKDACAALRDF-GAEADFLR 280
Query: 299 HLADFLVSRHK 309
L +LV R +
Sbjct: 281 ELVSYLVYRKQ 291
>gi|62959239|gb|AAY23727.1| farnesyl diphosphate synthase [Nocardia sp. JL-538]
Length = 145
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T ++ +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 93 FIHTHKTGALLEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|429331879|ref|ZP_19212619.1| polyprenyl synthetase [Pseudomonas putida CSV86]
gi|428763390|gb|EKX85565.1| polyprenyl synthetase [Pseudomonas putida CSV86]
Length = 295
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 49/294 (16%)
Query: 63 IDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPN---HEGERVHGTLCIASCELVGGN 116
I Y T +++ AL F+ +V L Y + + G+RV L A+CE +GG
Sbjct: 2 IRAYQTACQARVDAALEPLFQAPSVELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGT 61
Query: 117 ESSVMPLACAAEMLVTL------------------------ALNRALLCYAVEHMAT--- 149
ACA E++ A + A A + + +
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 150 ------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
+ + S + + ++ A G G++ G+ +++ S G + + L+F+ R +
Sbjct: 122 SALLDPRLSSQSDATRLAMVQTLAKAAGPAGMVGGQAIDLGSVGLKLDQAALEFMHRHKT 181
Query: 204 GKLIEASVVCGVLIG-GGSEEDIEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA- 255
G LIEASV G L + +++ L++Y + +GLA+QV DDILD + K++ A
Sbjct: 182 GALIEASVRLGALASERAGDAELKALQQYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 256 -GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYP L+G+ AK YA EL +A + FD A PL LA ++V R
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQAIDAVRPFDAA-AEPLRALARYIVERR 294
>gi|62959193|gb|AAY23704.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-25]
Length = 145
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T ++ +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 93 FIHTHKTGALLEVCVTTGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|416334175|ref|ZP_11671168.1| geranyltranstransferase [Escherichia coli WV_060327]
gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327]
Length = 299
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|154686692|ref|YP_001421853.1| hypothetical protein RBAM_022610 [Bacillus amyloliquefaciens FZB42]
gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42]
Length = 296
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 138/292 (47%), Gaps = 47/292 (16%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGN 116
++D ++ + + I + L E A+P L+ L + E G+R+ + +A G +
Sbjct: 4 KLDAFLASRKQLIEQQLSLYTERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKD 63
Query: 117 ESSVMPLACAAEMLVTLAL-------------------NRALLCYAVEHMATK------- 150
E +P+ CA EM+ T +L N + A +A
Sbjct: 64 EKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESF 123
Query: 151 -------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
++ VS ++ +R + E+ SA GT G++ G+ ++ ++ K ++L EL+ I +
Sbjct: 124 KLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKT 183
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG------- 256
KL+ SV G ++ E+++EKLR + +G+ +Q+ DDILD +++ G
Sbjct: 184 AKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDS 243
Query: 257 -DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++++TYP L+ + GAK ++EA Q ++ + L+ L D + +R
Sbjct: 244 SNEKSTYPSLLTLEGAKEKLAYHISEAKQIISGLSLQKEL-LHDLCDLIAAR 294
>gi|62959173|gb|AAY23694.1| farnesyl diphosphate synthase [Roseobacter denitrificans OCh 114]
Length = 145
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T ++ +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 93 FIHTHKTGALLEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75]
gi|415836265|ref|ZP_11518677.1| geranyltranstransferase [Escherichia coli RN587/1]
gi|417284109|ref|ZP_12071404.1| polyprenyl synthetase [Escherichia coli 3003]
gi|417754215|ref|ZP_12402310.1| geranyltranstransferase [Escherichia coli DEC2B]
gi|418995517|ref|ZP_13543131.1| geranyltranstransferase [Escherichia coli DEC1A]
gi|419000576|ref|ZP_13548138.1| geranyltranstransferase [Escherichia coli DEC1B]
gi|419006110|ref|ZP_13553566.1| geranyltranstransferase [Escherichia coli DEC1C]
gi|419011977|ref|ZP_13559342.1| farnesyl diphosphate synthase [Escherichia coli DEC1D]
gi|419016881|ref|ZP_13564207.1| geranyltranstransferase [Escherichia coli DEC1E]
gi|419027383|ref|ZP_13574583.1| geranyltranstransferase [Escherichia coli DEC2C]
gi|419033106|ref|ZP_13580204.1| geranyltranstransferase [Escherichia coli DEC2D]
gi|419038163|ref|ZP_13585223.1| geranyltranstransferase [Escherichia coli DEC2E]
gi|422368684|ref|ZP_16449089.1| polyprenyl synthetase [Escherichia coli MS 16-3]
gi|425276294|ref|ZP_18667638.1| geranyltranstransferase [Escherichia coli ARS4.2123]
gi|432552429|ref|ZP_19789161.1| farnesyl diphosphate synthase [Escherichia coli KTE47]
gi|432897206|ref|ZP_20108202.1| farnesyl diphosphate synthase [Escherichia coli KTE192]
gi|433027461|ref|ZP_20215337.1| farnesyl diphosphate synthase [Escherichia coli KTE109]
gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75]
gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3]
gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1]
gi|377848907|gb|EHU13883.1| geranyltranstransferase [Escherichia coli DEC1A]
gi|377850911|gb|EHU15866.1| geranyltranstransferase [Escherichia coli DEC1C]
gi|377854066|gb|EHU18956.1| geranyltranstransferase [Escherichia coli DEC1B]
gi|377862742|gb|EHU27549.1| farnesyl diphosphate synthase [Escherichia coli DEC1D]
gi|377866855|gb|EHU31619.1| geranyltranstransferase [Escherichia coli DEC1E]
gi|377879161|gb|EHU43734.1| geranyltranstransferase [Escherichia coli DEC2B]
gi|377883525|gb|EHU48043.1| geranyltranstransferase [Escherichia coli DEC2D]
gi|377885885|gb|EHU50376.1| geranyltranstransferase [Escherichia coli DEC2C]
gi|377898407|gb|EHU62767.1| geranyltranstransferase [Escherichia coli DEC2E]
gi|386242318|gb|EII84053.1| polyprenyl synthetase [Escherichia coli 3003]
gi|408207193|gb|EKI31947.1| geranyltranstransferase [Escherichia coli ARS4.2123]
gi|431087061|gb|ELD93066.1| farnesyl diphosphate synthase [Escherichia coli KTE47]
gi|431430016|gb|ELH11850.1| farnesyl diphosphate synthase [Escherichia coli KTE192]
gi|431545971|gb|ELI20614.1| farnesyl diphosphate synthase [Escherichia coli KTE109]
Length = 299
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|410091965|ref|ZP_11288509.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
gi|409760708|gb|EKN45832.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
Length = 295
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 45/254 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL--------------------NR 137
G+RV L A+CE +GG ACA E++ +L ++
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 138 AL--------------LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
A L + T + RL + + +++A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPNLTSRDAQTRL-QMVSTLATAAGPAGMVGGQAIDL 161
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVW 242
S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + VGLA+QV
Sbjct: 162 GSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGRADQTQLDALQVYARAVGLAFQVQ 221
Query: 243 DDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + K++ A D+ TYP L+G+ AK YA EL +A L F A
Sbjct: 222 DDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKGYALELRDQALTALDLFSNA-A 280
Query: 295 APLYHLADFLVSRH 308
PL LA ++V R
Sbjct: 281 EPLRELARYIVERR 294
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + + +L G +P + A EM+ T +L
Sbjct: 44 GKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHI 103
Query: 136 ----------NRALLCYAVEHMATKT-KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
ALL A E M K+ P+ +RA EIS G G++ G+++++
Sbjct: 104 VFGEAMAILAGDALLNTAYETMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQVVDVE 163
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
S+ K + +LD+I + +I SV G ++ G E+ +E L KY + +GLA+Q+ DD
Sbjct: 164 SEDKKIDKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDD 223
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD +K G +D++TYP L+G+ +K+ + L+ EA L F + A
Sbjct: 224 ILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGIDASKKIVENLIEEAKTSLEVF-ASDAEF 282
Query: 297 LYHLADFLVSRH 308
+ LADF+ R
Sbjct: 283 MNALADFIRDRQ 294
>gi|432615195|ref|ZP_19851330.1| farnesyl diphosphate synthase [Escherichia coli KTE75]
gi|431158135|gb|ELE58756.1| farnesyl diphosphate synthase [Escherichia coli KTE75]
Length = 299
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLEALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALSVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|62959211|gb|AAY23713.1| farnesyl diphosphate synthase [Synechococcus cf. elongatus
CCMP1379]
Length = 145
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T +V +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 93 FIHTHKTGALLEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|389872690|ref|YP_006380109.1| geranyltranstransferase [Advenella kashmirensis WT001]
gi|388537939|gb|AFK63127.1| geranyltranstransferase [Advenella kashmirensis WT001]
Length = 304
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 80/134 (59%), Gaps = 8/134 (5%)
Query: 153 NVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVV 212
+V+P +V+A+ ++ A G++G++ G+ +++ S + +L F+ RL+ G LIEASV
Sbjct: 141 SVAPALVVQAVNVLAQAAGSQGMVGGQAIDLASVNTRLDPEQLQFMHRLKTGALIEASVQ 200
Query: 213 CGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK--------KEAGDDEATYPK 264
G ++ + + L YG +GLA+QV DDILD + K+A D++ TY
Sbjct: 201 LGAIVTAANSDIRMALENYGSAIGLAFQVVDDILDVTADQQALGKTPGKDAADNKPTYVS 260
Query: 265 LMGVAGAKRYAKEL 278
+MG+A ++ +A++L
Sbjct: 261 VMGLAQSREFAQQL 274
>gi|339319330|ref|YP_004679025.1| geranyltranstransferase [Candidatus Midichloria mitochondrii
IricVA]
gi|338225455|gb|AEI88339.1| geranyltranstransferase [Candidatus Midichloria mitochondrii
IricVA]
Length = 284
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 45/280 (16%)
Query: 62 QIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSVM 121
+IDE + K LFE ++Y + +++ G L + + ++ N +
Sbjct: 18 EIDELLPTSFTKNADILFEA------IRYSAIS--ASKKIRGFLLVKTADIFNVNREQSL 69
Query: 122 PLACAAEMLVTLAL--------------------------------NRALLCYAVEHMAT 149
+A A EM+ T +L ALL YA E +A+
Sbjct: 70 KIAAAIEMIHTYSLIHDDLPAMDDGDYRRGKPSCHKEFGEAMGILAGDALLTYAFEVIAS 129
Query: 150 KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEA 209
N+ P ++ I EI+ A+G +G++ G++++I S+ ++S +L + +L+ G LIEA
Sbjct: 130 DQANIDPILRIKIIQEITRAIGIKGMIGGQVIDITSQ--NMSSDDLKEVHKLKTGALIEA 187
Query: 210 SVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGDDEATYPKLMGVA 269
S V G ++G S +++ R+Y +GL +Q+ DD++D ++ A A LM +
Sbjct: 188 SCVAGAIMGHASSDEMLVFREYAGKLGLIFQMVDDLIDEEDDRENAN---ANLLNLMPIV 244
Query: 270 GAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
K +EL A Q L + L L +++ ++ K
Sbjct: 245 KIKEEIEELKRAAIQGLKNLNNHNILILVGLINYIANQRK 284
>gi|350570077|ref|ZP_08938448.1| geranyltranstransferase [Neisseria wadsworthii 9715]
gi|349797362|gb|EGZ51126.1| geranyltranstransferase [Neisseria wadsworthii 9715]
Length = 297
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 99/168 (58%), Gaps = 10/168 (5%)
Query: 149 TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIE 208
++ N+ R ++ + ++ A G+ G+ G+ +++ + GK ++ +EL+ + L+ G LI
Sbjct: 129 SRPANLPAARQLKMVAVLAKAAGSLGMAGGQAIDLANVGKAMNQAELEQMHGLKTGALIR 188
Query: 209 ASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDE 259
A+V+ G L +++D+ +L Y K +GLA+QV DD+LD K+A +D+
Sbjct: 189 AAVMLGALCCPNLNDDDMVRLDGYAKKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDK 248
Query: 260 ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TY KLMG+A A+ YA+ LVA+A L F +AA L LA+F+ +R
Sbjct: 249 PTYVKLMGLADARSYAETLVADAVSLLVPF-GGKAARLRGLAEFVTAR 295
>gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1]
gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1]
Length = 295
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-D 224
++ A G G++ G+ +++ S G+ + L+F+ R + G LIEASV G L +E+
Sbjct: 144 LAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEQAQ 203
Query: 225 IEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAK 276
++ L+ Y + +GLA+QV DDILD + K++ A D+ TYP L+G+ AK YA
Sbjct: 204 LDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKVYAI 263
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
EL +A L F T A PL LA ++V R
Sbjct: 264 ELRDQALAALQGFGET-AEPLRALARYIVERR 294
>gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755]
gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755]
Length = 297
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A +++ ++ V + ++ + G +G+ G+ +++ S+ K ++L EL+
Sbjct: 118 ALQSFAFELLAFD-PSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELER 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILDNMKKK--- 252
I R + G LI ASV+ G + +++ ++L +Y K +GLA+QV DDILD +
Sbjct: 177 IHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDVIGNSEVI 236
Query: 253 -KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG D+A TYPKL+G+ GAK+ A+ L A + L P L LA+F+V R
Sbjct: 237 GKTAGSDQALDKSTYPKLLGLEGAKQKAESLYQTALKALETL-PFDTTALVALAEFIVKR 295
>gi|429211674|ref|ZP_19202839.1| geranyltranstransferase [Pseudomonas sp. M1]
gi|428156156|gb|EKX02704.1| geranyltranstransferase [Pseudomonas sp. M1]
Length = 295
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML------------------------VTL 133
G+RV L A+CE +GG+ + ACA E++ +
Sbjct: 43 GKRVRPLLAYAACEALGGDPARADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHI 102
Query: 134 ALNRA--------LLCYAVEHMATKTKN-VSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + A L A E +A N + + + ++ A G+ G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQALAFEVLAEARLNPQDAETRLAMVTALARAAGSAGMVGGQAIDLE 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWD 243
+ G+ + + L+ + R + G LIEASV G L G ++ E +E L +Y +GLA+QV D
Sbjct: 163 AVGRRIDQAALETMHRHKTGALIEASVRLGALASGQADAERLEALARYAGAIGLAFQVQD 222
Query: 244 DILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K+ D+ TYP L+G+ AK YA L +A L F A
Sbjct: 223 DILDVESDTATLGKTQGKDQAHDKPTYPALLGLEAAKTYALALRDQALAALEGFGEG-AE 281
Query: 296 PLYHLADFLVSRH 308
PL LA ++V R
Sbjct: 282 PLRELARYIVERR 294
>gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073]
gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972]
gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|386628008|ref|YP_006147728.1| geranyltranstransferase [Escherichia coli str. 'clone D i2']
gi|386632928|ref|YP_006152647.1| geranyltranstransferase [Escherichia coli str. 'clone D i14']
gi|386637834|ref|YP_006104632.1| geranyltranstransferase [Escherichia coli ABU 83972]
gi|422363047|ref|ZP_16443595.1| polyprenyl synthetase [Escherichia coli MS 153-1]
gi|432410490|ref|ZP_19653173.1| farnesyl diphosphate synthase [Escherichia coli KTE39]
gi|432430537|ref|ZP_19672982.1| farnesyl diphosphate synthase [Escherichia coli KTE187]
gi|432435066|ref|ZP_19677467.1| farnesyl diphosphate synthase [Escherichia coli KTE188]
gi|432455349|ref|ZP_19697551.1| farnesyl diphosphate synthase [Escherichia coli KTE201]
gi|432494290|ref|ZP_19736108.1| farnesyl diphosphate synthase [Escherichia coli KTE214]
gi|432503129|ref|ZP_19744866.1| farnesyl diphosphate synthase [Escherichia coli KTE220]
gi|432522574|ref|ZP_19759713.1| farnesyl diphosphate synthase [Escherichia coli KTE230]
gi|432567260|ref|ZP_19803787.1| farnesyl diphosphate synthase [Escherichia coli KTE53]
gi|432591540|ref|ZP_19827869.1| farnesyl diphosphate synthase [Escherichia coli KTE60]
gi|432606306|ref|ZP_19842502.1| farnesyl diphosphate synthase [Escherichia coli KTE67]
gi|432649949|ref|ZP_19885711.1| farnesyl diphosphate synthase [Escherichia coli KTE87]
gi|432782329|ref|ZP_20016515.1| farnesyl diphosphate synthase [Escherichia coli KTE63]
gi|432842708|ref|ZP_20076129.1| farnesyl diphosphate synthase [Escherichia coli KTE141]
gi|432977143|ref|ZP_20165968.1| farnesyl diphosphate synthase [Escherichia coli KTE209]
gi|432994216|ref|ZP_20182833.1| farnesyl diphosphate synthase [Escherichia coli KTE218]
gi|432998635|ref|ZP_20187175.1| farnesyl diphosphate synthase [Escherichia coli KTE223]
gi|433056759|ref|ZP_20243846.1| farnesyl diphosphate synthase [Escherichia coli KTE124]
gi|433086025|ref|ZP_20272429.1| farnesyl diphosphate synthase [Escherichia coli KTE137]
gi|433114372|ref|ZP_20300188.1| farnesyl diphosphate synthase [Escherichia coli KTE153]
gi|433123989|ref|ZP_20309580.1| farnesyl diphosphate synthase [Escherichia coli KTE160]
gi|433138050|ref|ZP_20323337.1| farnesyl diphosphate synthase [Escherichia coli KTE167]
gi|433147878|ref|ZP_20332944.1| farnesyl diphosphate synthase [Escherichia coli KTE174]
gi|433206571|ref|ZP_20390272.1| farnesyl diphosphate synthase [Escherichia coli KTE97]
gi|433211351|ref|ZP_20394966.1| farnesyl diphosphate synthase [Escherichia coli KTE99]
gi|442606687|ref|ZP_21021482.1| Dimethylallyltransferase [Escherichia coli Nissle 1917]
gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073]
gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972]
gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972]
gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1]
gi|355418907|gb|AER83104.1| geranyltranstransferase [Escherichia coli str. 'clone D i2']
gi|355423827|gb|AER88023.1| geranyltranstransferase [Escherichia coli str. 'clone D i14']
gi|430938426|gb|ELC58667.1| farnesyl diphosphate synthase [Escherichia coli KTE39]
gi|430956159|gb|ELC74835.1| farnesyl diphosphate synthase [Escherichia coli KTE187]
gi|430966645|gb|ELC84008.1| farnesyl diphosphate synthase [Escherichia coli KTE188]
gi|430985221|gb|ELD01827.1| farnesyl diphosphate synthase [Escherichia coli KTE201]
gi|431027806|gb|ELD40851.1| farnesyl diphosphate synthase [Escherichia coli KTE214]
gi|431042131|gb|ELD52623.1| farnesyl diphosphate synthase [Escherichia coli KTE220]
gi|431054694|gb|ELD64263.1| farnesyl diphosphate synthase [Escherichia coli KTE230]
gi|431103093|gb|ELE07763.1| farnesyl diphosphate synthase [Escherichia coli KTE53]
gi|431132984|gb|ELE34982.1| farnesyl diphosphate synthase [Escherichia coli KTE60]
gi|431140528|gb|ELE42294.1| farnesyl diphosphate synthase [Escherichia coli KTE67]
gi|431193320|gb|ELE92656.1| farnesyl diphosphate synthase [Escherichia coli KTE87]
gi|431332041|gb|ELG19284.1| farnesyl diphosphate synthase [Escherichia coli KTE63]
gi|431397236|gb|ELG80692.1| farnesyl diphosphate synthase [Escherichia coli KTE141]
gi|431482247|gb|ELH61950.1| farnesyl diphosphate synthase [Escherichia coli KTE209]
gi|431509550|gb|ELH87799.1| farnesyl diphosphate synthase [Escherichia coli KTE218]
gi|431514204|gb|ELH92046.1| farnesyl diphosphate synthase [Escherichia coli KTE223]
gi|431574202|gb|ELI46984.1| farnesyl diphosphate synthase [Escherichia coli KTE124]
gi|431610187|gb|ELI79488.1| farnesyl diphosphate synthase [Escherichia coli KTE137]
gi|431636872|gb|ELJ04991.1| farnesyl diphosphate synthase [Escherichia coli KTE153]
gi|431650092|gb|ELJ17429.1| farnesyl diphosphate synthase [Escherichia coli KTE160]
gi|431665019|gb|ELJ31746.1| farnesyl diphosphate synthase [Escherichia coli KTE167]
gi|431676771|gb|ELJ42854.1| farnesyl diphosphate synthase [Escherichia coli KTE174]
gi|431733127|gb|ELJ96568.1| farnesyl diphosphate synthase [Escherichia coli KTE97]
gi|431736006|gb|ELJ99348.1| farnesyl diphosphate synthase [Escherichia coli KTE99]
gi|441711994|emb|CCQ07459.1| Dimethylallyltransferase [Escherichia coli Nissle 1917]
Length = 299
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|258405879|ref|YP_003198621.1| polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
Length = 292
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 51/280 (18%)
Query: 69 LKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAE 128
L A+++ L+E ++Y L G+RV LC+ EL+GG+ +V+P A E
Sbjct: 21 LDARRMPATLYES------MRYSLLAG--GKRVRPVLCLVWAELLGGDRQAVLPFASGLE 72
Query: 129 MLVTLAL--------------------------------NRALLCYAVEHMATKTKNVSP 156
+ T +L LL +A E M ++
Sbjct: 73 CIHTYSLVHDDLPAMDDDDLRRGKPSNHKQFGEAMAILAGDGLLTHAFELMLHA--DLPA 130
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVS-LSELDFIKRLRCGKLIEASVVCGV 215
+RLVRA G ++ A G G++ G++ +I G + + +L + ++ G L++ + G
Sbjct: 131 ERLVRAAGLVAGAAGASGMIGGQVTDIQLTGSGATNVEDLRAMHGMKTGALLQVACTSGA 190
Query: 216 LIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK--------KEAGDDEATYPKLMG 267
++ G EEDI++ YG +GLA+QV DDILD + + + G D+ TYP LMG
Sbjct: 191 VLAGAIEEDIQRAATYGGALGLAFQVADDILDVVGDEAALGKPVGSDQGADKVTYPALMG 250
Query: 268 VAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ +K +E+VA+A + L +A L LA +++ R
Sbjct: 251 LDKSKSLGQEMVAQAQEALQGKSGPQADFLSDLAQYVMDR 290
>gi|62959177|gb|AAY23696.1| farnesyl diphosphate synthase [Bacillus sp. JL-34]
gi|62959197|gb|AAY23706.1| farnesyl diphosphate synthase [Bacillus sp. JL-29]
gi|73811209|gb|AAY23723.1| farnesyl diphosphate synthase [Citromicrobium bathyomarinum JL354]
Length = 145
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T ++ +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 93 FIHTHKTGALLEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|294101849|ref|YP_003553707.1| geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ LC+ + E VGG + V+P+A A EM+ T +L
Sbjct: 48 GKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPAMDNDSLRRGKPTNHM 107
Query: 136 ----------NRALLCYAVEHM--ATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL +A E+ + V P +V+A+ + AVG G+ G++++
Sbjct: 108 IYGDALAILAGDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQAVGPSGICGGQVLDT 167
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
+ SLS + I + L++AS+V G ++GG S+E KYG+ +GLA+Q+ D
Sbjct: 168 DPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGAFGKYGRHLGLAFQIVD 227
Query: 244 DILDNMKK--------KKEAGDDEATYPKLMGVAGAKRYAKELVAEANQEL 286
DILD K+A + T+ G+ A++ A + EA + L
Sbjct: 228 DILDVTSSPEELGKTPGKDAAQQKITFVTQFGLEEARKMALKESKEAAESL 278
>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 295
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-D 224
++ A G G++AG+ +++ S G + L+F+ R + G LIEASV G L G +E+
Sbjct: 144 LAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMHRHKTGALIEASVRLGALASGRAEQAQ 203
Query: 225 IEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAK 276
++ L+ Y + +GLA+QV DDILD + K++ A D+ TYP L+G+ AK YA
Sbjct: 204 LDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAI 263
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
EL +A L F A PL LA ++V R
Sbjct: 264 ELRDQALVALEGFGED-AEPLRALARYIVERR 294
>gi|62959179|gb|AAY23697.1| farnesyl diphosphate synthase [Bacillus sp. JL-39]
gi|62959189|gb|AAY23702.1| farnesyl diphosphate synthase [Kocuria sp. JL-51]
gi|62959199|gb|AAY23707.1| farnesyl diphosphate synthase [Rhodococcus sp. JL-61]
gi|73811207|gb|AAY23722.1| farnesyl diphosphate synthase [Sagittula sp. JL-351]
Length = 145
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T ++ +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L+E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 93 FIHTHKTGALLEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|385265427|ref|ZP_10043514.1| Polyprenyl synthetase [Bacillus sp. 5B6]
gi|394992172|ref|ZP_10384964.1| YqiD [Bacillus sp. 916]
gi|429505839|ref|YP_007187023.1| hypothetical protein B938_11695 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452856198|ref|YP_007497881.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|385149923|gb|EIF13860.1| Polyprenyl synthetase [Bacillus sp. 5B6]
gi|393807001|gb|EJD68328.1| YqiD [Bacillus sp. 916]
gi|429487429|gb|AFZ91353.1| hypothetical protein B938_11695 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452080458|emb|CCP22221.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 296
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 137/292 (46%), Gaps = 47/292 (16%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGN 116
++D ++ + + I + L E A+P L+ L + E G+R+ + +A G +
Sbjct: 4 KLDAFLASRKQLIEQQLSLYTERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKD 63
Query: 117 ESSVMPLACAAEMLVTLAL-------------------NRALLCYAVEHMATK------- 150
E +P+ CA EM+ T +L N + A +A
Sbjct: 64 EKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESF 123
Query: 151 -------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
++ VS ++ +R + E+ SA GT G++ G+ ++ ++ K ++L EL+ I +
Sbjct: 124 KLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKT 183
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG------- 256
KL+ SV G ++ E+++EKLR + +G+ +Q+ DDILD ++ G
Sbjct: 184 AKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEERIGKPVGSDT 243
Query: 257 -DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++++TYP L+ + GAK ++EA Q ++ + L+ L D + +R
Sbjct: 244 SNEKSTYPSLLTLEGAKEKLAYHISEAKQIISGLSLQKEL-LHDLCDLIAAR 294
>gi|416273495|ref|ZP_11643410.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112]
gi|420378648|ref|ZP_14878147.1| farnesyl diphosphate synthase [Shigella dysenteriae 225-75]
gi|432684254|ref|ZP_19919573.1| farnesyl diphosphate synthase [Escherichia coli KTE156]
gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112]
gi|391306881|gb|EIQ64629.1| farnesyl diphosphate synthase [Shigella dysenteriae 225-75]
gi|431225225|gb|ELF22430.1| farnesyl diphosphate synthase [Escherichia coli KTE156]
Length = 299
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L+ L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLNALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|397698475|ref|YP_006536358.1| polyprenyl synthetase [Pseudomonas putida DOT-T1E]
gi|397335205|gb|AFO51564.1| polyprenyl synthetase [Pseudomonas putida DOT-T1E]
Length = 295
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-D 224
++ A G G++ G+ +++ S G+ + L+F+ R + G LIEASV G L +E+
Sbjct: 144 LAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEQAQ 203
Query: 225 IEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAK 276
++ L+ Y + +GLA+QV DDILD + K++ A D+ TYP L+G+ AK YA
Sbjct: 204 LDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKVYAI 263
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
EL +A L F T A PL LA ++V R
Sbjct: 264 ELRDQALAALQGFGET-AEPLRALARYIVERR 294
>gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10]
gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10]
Length = 297
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 12/166 (7%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
LL ++ ++ +K +++S D V I +I+ A G G++ G++ ++ +GK+++ EL+
Sbjct: 119 GLLTHSF-NLISKDEHLSADLKVALIADITDAAGPEGMVGGQVSDMQGEGKELTAEELEA 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE--- 254
I + G L+ S++ G I G +EED + L GK +GLA+Q+ DD+LD +E
Sbjct: 178 IHHRKTGDLLSVSLMAGGKIAGLNEEDNKYLSLLGKHLGLAFQIKDDLLDIEGTVEEIGK 237
Query: 255 -----AGDDEATYPKLMGVAGAKRYAKELVAEAN---QELAYFDPT 292
AG+D+ TYP L+G+ GAK+ + EA Q + +F+P
Sbjct: 238 PVGSDAGNDKNTYPSLLGLDGAKKKLDIHLNEARMNLQRIRHFNPV 283
>gi|339484559|ref|YP_004696345.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
gi|338806704|gb|AEJ02946.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
Length = 297
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+RV L A+ EL + VM +A A E++
Sbjct: 46 GKRVRPLLSFAAGELALADTDRVMVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHI 105
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L +L A E +A K P + I +++ A G+RG+ G+ +++S
Sbjct: 106 EFDEATALLTGDSLQTLAFELLAEKCLADEPGTQLEMIAQLAVAAGSRGMAGGQAFDLDS 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDD 244
GK +SL EL+F+ + G LI A+V+ G + + KL + KCVGLA+QV DD
Sbjct: 166 VGKTLSLPELEFMHIHKTGALIRAAVMLGARCNNRLNNNQLGKLDHFAKCVGLAFQVVDD 225
Query: 245 ILDNMKKK--------KEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+A +++ TY ++G++ A+ A++L +A Q L F A
Sbjct: 226 LLDTEATTATLGKTAGKDAENNKPTYVSILGISQARELAEKLQHDAYQALDSFGEA-ALR 284
Query: 297 LYHLADFLVSR 307
L + DF++ R
Sbjct: 285 LRQVTDFIIKR 295
>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 45/255 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +L G ++ P A EM+ T +L
Sbjct: 48 GKRLRPMLMKETYDLFNGRSKALKPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHV 107
Query: 136 ----------NRALLCYAVEHMATKTKNVSP-DRLV--RAIGEISSAVGTRGVLAGRIME 182
ALL YA E A K P D L+ RA+G + G G++ G++++
Sbjct: 108 VYGEDMGILAGDALLNYAFE-TAFKAFVTEPEDSLLIGRALGVLGEKAGIYGMIGGQVID 166
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ G+D+S LD I L+ LIE++++ G ++GG SEE+++ + + VG+A+Q+
Sbjct: 167 VRETGRDISKEVLDTIYELKTAALIESAMMIGAILGGASEEEVKAVEQIAGNVGIAFQIQ 226
Query: 243 DDILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDILD + + G + + TY L+G+ A R +EL +A L P R
Sbjct: 227 DDILDVVSSSEVLGKPVHSDEKNKKTTYVTLLGIEEAARTVEELSQKAVSLLHQL-PGRN 285
Query: 295 APLYHLADFLVSRHK 309
A L L L+ R K
Sbjct: 286 AYLEQLLMQLIHRDK 300
>gi|432717430|ref|ZP_19952432.1| farnesyl diphosphate synthase [Escherichia coli KTE9]
gi|431267034|gb|ELF58567.1| farnesyl diphosphate synthase [Escherichia coli KTE9]
Length = 299
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|386617914|ref|YP_006137494.1| geranyltranstransferase [Escherichia coli NA114]
gi|387828434|ref|YP_003348371.1| geranyltranstransferase [Escherichia coli SE15]
gi|432420531|ref|ZP_19663089.1| farnesyl diphosphate synthase [Escherichia coli KTE178]
gi|432498665|ref|ZP_19740445.1| farnesyl diphosphate synthase [Escherichia coli KTE216]
gi|432557438|ref|ZP_19794131.1| farnesyl diphosphate synthase [Escherichia coli KTE49]
gi|432693205|ref|ZP_19928420.1| farnesyl diphosphate synthase [Escherichia coli KTE162]
gi|432709252|ref|ZP_19944321.1| farnesyl diphosphate synthase [Escherichia coli KTE6]
gi|432917553|ref|ZP_20122084.1| farnesyl diphosphate synthase [Escherichia coli KTE173]
gi|432924858|ref|ZP_20126997.1| farnesyl diphosphate synthase [Escherichia coli KTE175]
gi|432979925|ref|ZP_20168706.1| farnesyl diphosphate synthase [Escherichia coli KTE211]
gi|433095288|ref|ZP_20281504.1| farnesyl diphosphate synthase [Escherichia coli KTE139]
gi|433104556|ref|ZP_20290579.1| farnesyl diphosphate synthase [Escherichia coli KTE148]
gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15]
gi|333968415|gb|AEG35220.1| Geranyltranstransferase [Escherichia coli NA114]
gi|430947696|gb|ELC67393.1| farnesyl diphosphate synthase [Escherichia coli KTE178]
gi|431032259|gb|ELD44970.1| farnesyl diphosphate synthase [Escherichia coli KTE216]
gi|431094491|gb|ELE00123.1| farnesyl diphosphate synthase [Escherichia coli KTE49]
gi|431237347|gb|ELF32347.1| farnesyl diphosphate synthase [Escherichia coli KTE162]
gi|431252973|gb|ELF46487.1| farnesyl diphosphate synthase [Escherichia coli KTE6]
gi|431447426|gb|ELH28158.1| farnesyl diphosphate synthase [Escherichia coli KTE173]
gi|431449517|gb|ELH30090.1| farnesyl diphosphate synthase [Escherichia coli KTE175]
gi|431496546|gb|ELH76129.1| farnesyl diphosphate synthase [Escherichia coli KTE211]
gi|431619858|gb|ELI88755.1| farnesyl diphosphate synthase [Escherichia coli KTE139]
gi|431634580|gb|ELJ02821.1| farnesyl diphosphate synthase [Escherichia coli KTE148]
Length = 299
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 17/170 (10%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAY-----FDPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L FD + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSFDTS---ALEALADYIIQRNK 299
>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 16/182 (8%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + TK+ + ++ ++ + E+S A G RG+ G+ +++ ++ K V+L+EL+
Sbjct: 117 ALQTFAFE-IITKSTALCAEQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELEL 175
Query: 198 IKRLRCGKLIEASVVCGVLIG--GGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A+++ G + + +L++Y +GLA+QV DDILD E
Sbjct: 176 IHRNKTGALLTAALMMGFICSPHYANHALACRLKQYADAIGLAFQVRDDILDIEGNTVEI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQEL--AYFDPTRAAPLYHLADFLV 305
G D++TYPK++G+ GAK A+EL A + L FD T L LA+F++
Sbjct: 236 GKTVGADLNLDKSTYPKMLGLDGAKSKAQELYQSAVKNLNEISFDTT---ALRALAEFII 292
Query: 306 SR 307
R
Sbjct: 293 HR 294
>gi|392553125|ref|ZP_10300262.1| geranyltranstransferase [Pseudoalteromonas spongiae UST010723-006]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSP-DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELD 196
AL C A E + N + + ++ + +++A G G+ G+ ++I + ++L++L+
Sbjct: 117 ALQCLAFETITESQFNCTTVNNQLKIVNTLANASGLLGMCGGQALDIAATDSVITLTQLE 176
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD-----NMKK 251
+ +L+ G L+++++ G L G +E +I L +Y + +GLA+QV DDILD +
Sbjct: 177 QVHKLKTGALLKSAIKMGALAGNANELEIAALARYAEAIGLAFQVQDDILDVEGDTHTLG 236
Query: 252 KKEAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K + D E ATYP L+G+ GAK A+ LV +A L+ D L +A+++++R
Sbjct: 237 KPQGSDIEANKATYPALLGIEGAKEKAQNLVNQAIDALSEIDAD-TGRLKAIAEYIIAR 294
>gi|418464203|ref|ZP_13035143.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756999|gb|EHK91155.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 30/227 (13%)
Query: 91 PTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATK 150
P + + E R H T C + ++++ A + L TLA + T
Sbjct: 88 PAMDDDELRRGHQT-----CHIAFDEATAIL----AGDALQTLAFE----------ILTD 128
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEAS 210
++S ++ + I +S+A G +G+ G+ +++ S+ K +SL EL+ I + G L+ A+
Sbjct: 129 IPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGALLTAA 188
Query: 211 VVCGVLIGGGSEED--IEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGD----DEA 260
+ G + + ++L +Y +GLA+QV DDIL D+ K AG D++
Sbjct: 189 LKMGFICSPHFADTALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTAGSDLTADKS 248
Query: 261 TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYPKL+G+ GAK+ A+EL A EL P LY LA+F+V R
Sbjct: 249 TYPKLLGLEGAKQKAQELYQTALAELKNL-PFNTTALYALAEFIVKR 294
>gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088]
gi|415828338|ref|ZP_11514935.1| geranyltranstransferase [Escherichia coli OK1357]
gi|419389834|ref|ZP_13930673.1| geranyltranstransferase [Escherichia coli DEC15A]
gi|419395006|ref|ZP_13935791.1| geranyltranstransferase [Escherichia coli DEC15B]
gi|419400357|ref|ZP_13941091.1| geranyltranstransferase [Escherichia coli DEC15C]
gi|419405528|ref|ZP_13946232.1| geranyltranstransferase [Escherichia coli DEC15D]
gi|419411023|ref|ZP_13951696.1| geranyltranstransferase [Escherichia coli DEC15E]
gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088]
gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli OK1357]
gi|378244636|gb|EHY04578.1| geranyltranstransferase [Escherichia coli DEC15A]
gi|378251858|gb|EHY11754.1| geranyltranstransferase [Escherichia coli DEC15B]
gi|378252188|gb|EHY12082.1| geranyltranstransferase [Escherichia coli DEC15C]
gi|378257917|gb|EHY17753.1| geranyltranstransferase [Escherichia coli DEC15D]
gi|378261214|gb|EHY21009.1| geranyltranstransferase [Escherichia coli DEC15E]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTVTLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A]
gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS]
gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22]
gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019]
gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171]
gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1]
gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989]
gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W]
gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA271]
gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H591]
gi|378714175|ref|YP_005279068.1| polyprenyl synthetase [Escherichia coli KO11FL]
gi|386607781|ref|YP_006123267.1| geranyltranstransferase [Escherichia coli W]
gi|386702776|ref|YP_006166613.1| geranyltranstransferase [Escherichia coli KO11FL]
gi|386708220|ref|YP_006171941.1| geranyltranstransferase [Escherichia coli W]
gi|407467867|ref|YP_006785691.1| geranyltranstransferase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407483402|ref|YP_006780551.1| geranyltranstransferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483956|ref|YP_006771502.1| geranyltranstransferase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415793712|ref|ZP_11496256.1| geranyltranstransferase [Escherichia coli EPECa14]
gi|415801162|ref|ZP_11499563.1| geranyltranstransferase [Escherichia coli E128010]
gi|415821060|ref|ZP_11510074.1| geranyltranstransferase [Escherichia coli OK1180]
gi|415862696|ref|ZP_11536136.1| polyprenyl synthetase [Escherichia coli MS 85-1]
gi|415873815|ref|ZP_11540988.1| geranyltranstransferase [Escherichia coli MS 79-10]
gi|417135644|ref|ZP_11980429.1| polyprenyl synthetase [Escherichia coli 5.0588]
gi|417153176|ref|ZP_11991967.1| polyprenyl synthetase [Escherichia coli 96.0497]
gi|417175808|ref|ZP_12005604.1| polyprenyl synthetase [Escherichia coli 3.2608]
gi|417179107|ref|ZP_12007207.1| polyprenyl synthetase [Escherichia coli 93.0624]
gi|417190719|ref|ZP_12013315.1| polyprenyl synthetase [Escherichia coli 4.0522]
gi|417218308|ref|ZP_12023910.1| polyprenyl synthetase [Escherichia coli JB1-95]
gi|417253466|ref|ZP_12045225.1| polyprenyl synthetase [Escherichia coli 4.0967]
gi|417267927|ref|ZP_12055288.1| polyprenyl synthetase [Escherichia coli 3.3884]
gi|417299205|ref|ZP_12086435.1| polyprenyl synthetase [Escherichia coli 900105 (10e)]
gi|417579641|ref|ZP_12230463.1| geranyltranstransferase [Escherichia coli STEC_B2F1]
gi|417590098|ref|ZP_12240818.1| geranyltranstransferase [Escherichia coli 2534-86]
gi|417595341|ref|ZP_12246011.1| geranyltranstransferase [Escherichia coli 3030-1]
gi|417621686|ref|ZP_12272015.1| geranyltranstransferase [Escherichia coli STEC_H.1.8]
gi|417637720|ref|ZP_12287895.1| geranyltranstransferase [Escherichia coli TX1999]
gi|417665503|ref|ZP_12315070.1| geranyltranstransferase [Escherichia coli STEC_O31]
gi|417710959|ref|ZP_12359966.1| geranyltranstransferase [Shigella flexneri K-272]
gi|417715626|ref|ZP_12364562.1| geranyltranstransferase [Shigella flexneri K-227]
gi|417803773|ref|ZP_12450808.1| geranyltranstransferase [Escherichia coli O104:H4 str. LB226692]
gi|417831525|ref|ZP_12478047.1| geranyltranstransferase [Escherichia coli O104:H4 str. 01-09591]
gi|417867722|ref|ZP_12512757.1| hypothetical protein C22711_4648 [Escherichia coli O104:H4 str.
C227-11]
gi|418042537|ref|ZP_12680731.1| Polyprenyl synthetase [Escherichia coli W26]
gi|418941171|ref|ZP_13494508.1| geranyltranstransferase [Escherichia coli O157:H43 str. T22]
gi|419168415|ref|ZP_13712813.1| farnesyl diphosphate synthase [Escherichia coli DEC7A]
gi|419179409|ref|ZP_13723034.1| geranyltranstransferase [Escherichia coli DEC7C]
gi|419184966|ref|ZP_13728488.1| geranyltranstransferase [Escherichia coli DEC7D]
gi|419190214|ref|ZP_13733682.1| farnesyl diphosphate synthase [Escherichia coli DEC7E]
gi|419195513|ref|ZP_13738921.1| farnesyl diphosphate synthase [Escherichia coli DEC8A]
gi|419201540|ref|ZP_13744768.1| geranyltranstransferase [Escherichia coli DEC8B]
gi|419207416|ref|ZP_13750544.1| geranyltranstransferase [Escherichia coli DEC8C]
gi|419213856|ref|ZP_13756888.1| geranyltranstransferase [Escherichia coli DEC8D]
gi|419219681|ref|ZP_13762638.1| geranyltranstransferase [Escherichia coli DEC8E]
gi|419225142|ref|ZP_13768032.1| geranyltranstransferase [Escherichia coli DEC9A]
gi|419230930|ref|ZP_13773722.1| geranyltranstransferase [Escherichia coli DEC9B]
gi|419236264|ref|ZP_13779015.1| geranyltranstransferase [Escherichia coli DEC9C]
gi|419241857|ref|ZP_13784507.1| geranyltranstransferase [Escherichia coli DEC9D]
gi|419247263|ref|ZP_13789879.1| geranyltranstransferase [Escherichia coli DEC9E]
gi|419253042|ref|ZP_13795592.1| geranyltranstransferase [Escherichia coli DEC10A]
gi|419259051|ref|ZP_13801511.1| geranyltranstransferase [Escherichia coli DEC10B]
gi|419265181|ref|ZP_13807568.1| geranyltranstransferase [Escherichia coli DEC10C]
gi|419270739|ref|ZP_13813072.1| geranyltranstransferase [Escherichia coli DEC10D]
gi|419282139|ref|ZP_13824361.1| geranyltranstransferase [Escherichia coli DEC10F]
gi|419287882|ref|ZP_13830000.1| geranyltranstransferase [Escherichia coli DEC11A]
gi|419293219|ref|ZP_13835280.1| geranyltranstransferase [Escherichia coli DEC11B]
gi|419298660|ref|ZP_13840678.1| farnesyl diphosphate synthase [Escherichia coli DEC11C]
gi|419304943|ref|ZP_13846857.1| farnesyl diphosphate synthase [Escherichia coli DEC11D]
gi|419309969|ref|ZP_13851846.1| farnesyl diphosphate synthase [Escherichia coli DEC11E]
gi|419315288|ref|ZP_13857116.1| farnesyl diphosphate synthase [Escherichia coli DEC12A]
gi|419321063|ref|ZP_13862806.1| geranyltranstransferase [Escherichia coli DEC12B]
gi|419327309|ref|ZP_13868942.1| farnesyl diphosphate synthase [Escherichia coli DEC12C]
gi|419332721|ref|ZP_13874285.1| geranyltranstransferase [Escherichia coli DEC12D]
gi|419339658|ref|ZP_13881135.1| geranyltranstransferase [Escherichia coli DEC12E]
gi|419344065|ref|ZP_13885449.1| geranyltranstransferase [Escherichia coli DEC13A]
gi|419348498|ref|ZP_13889851.1| geranyltranstransferase [Escherichia coli DEC13B]
gi|419353400|ref|ZP_13894686.1| geranyltranstransferase [Escherichia coli DEC13C]
gi|419358744|ref|ZP_13899975.1| geranyltranstransferase [Escherichia coli DEC13D]
gi|419363586|ref|ZP_13904768.1| geranyltranstransferase [Escherichia coli DEC13E]
gi|419368703|ref|ZP_13909832.1| farnesyl diphosphate synthase [Escherichia coli DEC14A]
gi|419862444|ref|ZP_14385049.1| geranyltranstransferase [Escherichia coli O103:H25 str. CVM9340]
gi|419867919|ref|ZP_14390233.1| geranyltranstransferase [Escherichia coli O103:H2 str. CVM9450]
gi|419876949|ref|ZP_14398608.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9534]
gi|419882624|ref|ZP_14403834.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9545]
gi|419888462|ref|ZP_14408969.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9570]
gi|419893057|ref|ZP_14413063.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9574]
gi|419900613|ref|ZP_14420039.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM9942]
gi|419908306|ref|ZP_14427040.1| polyprenyl synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|419923207|ref|ZP_14441169.1| geranyltranstransferase [Escherichia coli 541-15]
gi|419928035|ref|ZP_14445755.1| geranyltranstransferase [Escherichia coli 541-1]
gi|420088236|ref|ZP_14600140.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9602]
gi|420092954|ref|ZP_14604644.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9634]
gi|420103084|ref|ZP_14613998.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9455]
gi|420109713|ref|ZP_14619813.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9553]
gi|420113394|ref|ZP_14623137.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM10021]
gi|420119620|ref|ZP_14628885.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM10030]
gi|420125697|ref|ZP_14634488.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM10224]
gi|420130808|ref|ZP_14639288.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM9952]
gi|420318854|ref|ZP_14820711.1| farnesyl diphosphate synthase [Shigella flexneri 2850-71]
gi|420384058|ref|ZP_14883446.1| farnesyl diphosphate synthase [Escherichia coli EPECa12]
gi|420389757|ref|ZP_14889030.1| geranyltranstransferase [Escherichia coli EPEC C342-62]
gi|422763212|ref|ZP_16816967.1| polyprenyl synthetase [Escherichia coli E1167]
gi|422777114|ref|ZP_16830767.1| polyprenyl synthetase [Escherichia coli H120]
gi|422960305|ref|ZP_16971753.1| farnesyl diphosphate synthase [Escherichia coli H494]
gi|422991134|ref|ZP_16981905.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
C227-11]
gi|422993073|ref|ZP_16983837.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
C236-11]
gi|422998284|ref|ZP_16989040.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
09-7901]
gi|423006745|ref|ZP_16997488.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
04-8351]
gi|423008388|ref|ZP_16999126.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-3677]
gi|423022575|ref|ZP_17013278.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4404]
gi|423027729|ref|ZP_17018422.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4522]
gi|423033566|ref|ZP_17024250.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4623]
gi|423036432|ref|ZP_17027106.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041552|ref|ZP_17032219.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423048238|ref|ZP_17038895.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423051822|ref|ZP_17040630.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058787|ref|ZP_17047583.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423710189|ref|ZP_17684539.1| farnesyl diphosphate synthase [Escherichia coli B799]
gi|424747949|ref|ZP_18176101.1| geranyltranstransferase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424766704|ref|ZP_18194049.1| geranyltranstransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424768136|ref|ZP_18195428.1| geranyltranstransferase [Escherichia coli O111:H8 str. CFSAN001632]
gi|425377236|ref|ZP_18761638.1| geranyltranstransferase [Escherichia coli EC1865]
gi|425421030|ref|ZP_18802261.1| geranyltranstransferase [Escherichia coli 0.1288]
gi|427803488|ref|ZP_18970555.1| geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
coli chi7122]
gi|427808106|ref|ZP_18975171.1| geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
coli]
gi|429722614|ref|ZP_19257512.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774711|ref|ZP_19306714.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02030]
gi|429779974|ref|ZP_19311927.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784026|ref|ZP_19315939.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02092]
gi|429789364|ref|ZP_19321239.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02093]
gi|429795594|ref|ZP_19327420.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02281]
gi|429801520|ref|ZP_19333298.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02318]
gi|429805152|ref|ZP_19336899.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02913]
gi|429809963|ref|ZP_19341665.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-03439]
gi|429815723|ref|ZP_19347382.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-04080]
gi|429821311|ref|ZP_19352924.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-03943]
gi|429906985|ref|ZP_19372954.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429911183|ref|ZP_19377139.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917019|ref|ZP_19382959.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922057|ref|ZP_19387978.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927875|ref|ZP_19393781.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931807|ref|ZP_19397702.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429933409|ref|ZP_19399299.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939063|ref|ZP_19404937.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946706|ref|ZP_19412561.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949338|ref|ZP_19415186.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957622|ref|ZP_19423451.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432375501|ref|ZP_19618515.1| farnesyl diphosphate synthase [Escherichia coli KTE12]
gi|432479782|ref|ZP_19721747.1| farnesyl diphosphate synthase [Escherichia coli KTE210]
gi|432748874|ref|ZP_19983497.1| farnesyl diphosphate synthase [Escherichia coli KTE29]
gi|432804499|ref|ZP_20038445.1| farnesyl diphosphate synthase [Escherichia coli KTE91]
gi|432830406|ref|ZP_20064015.1| farnesyl diphosphate synthase [Escherichia coli KTE135]
gi|432833474|ref|ZP_20067022.1| farnesyl diphosphate synthase [Escherichia coli KTE136]
gi|432932755|ref|ZP_20132609.1| farnesyl diphosphate synthase [Escherichia coli KTE184]
gi|433128749|ref|ZP_20314229.1| farnesyl diphosphate synthase [Escherichia coli KTE163]
gi|433133569|ref|ZP_20318952.1| farnesyl diphosphate synthase [Escherichia coli KTE166]
gi|433192348|ref|ZP_20376370.1| farnesyl diphosphate synthase [Escherichia coli KTE90]
gi|443616446|ref|YP_007380302.1| geranyltranstransferase [Escherichia coli APEC O78]
gi|450211039|ref|ZP_21894178.1| geranyltranstransferase [Escherichia coli O08]
gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS]
gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A]
gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22]
gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019]
gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171]
gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989]
gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1]
gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W]
gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W]
gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1]
gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14]
gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010]
gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli OK1180]
gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11FL]
gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120]
gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167]
gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA271]
gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H591]
gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272]
gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227]
gi|340735677|gb|EGR64733.1| geranyltranstransferase [Escherichia coli O104:H4 str. 01-09591]
gi|340741482|gb|EGR75628.1| geranyltranstransferase [Escherichia coli O104:H4 str. LB226692]
gi|341921011|gb|EGT70615.1| hypothetical protein C22711_4648 [Escherichia coli O104:H4 str.
C227-11]
gi|342930619|gb|EGU99341.1| geranyltranstransferase [Escherichia coli MS 79-10]
gi|345344061|gb|EGW76437.1| geranyltranstransferase [Escherichia coli STEC_B2F1]
gi|345345271|gb|EGW77617.1| geranyltranstransferase [Escherichia coli 2534-86]
gi|345361709|gb|EGW93867.1| geranyltranstransferase [Escherichia coli 3030-1]
gi|345386261|gb|EGX16096.1| geranyltranstransferase [Escherichia coli STEC_H.1.8]
gi|345395464|gb|EGX25208.1| geranyltranstransferase [Escherichia coli TX1999]
gi|354858244|gb|EHF18695.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
04-8351]
gi|354860120|gb|EHF20567.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
C227-11]
gi|354866816|gb|EHF27239.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
C236-11]
gi|354877152|gb|EHF37512.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
09-7901]
gi|354879459|gb|EHF39797.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4404]
gi|354884046|gb|EHF44360.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-3677]
gi|354885847|gb|EHF46139.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4522]
gi|354888914|gb|EHF49168.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4623]
gi|354901515|gb|EHF61642.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905746|gb|EHF65829.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354908253|gb|EHF68309.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354918725|gb|EHF78681.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354922413|gb|EHF82328.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|371594103|gb|EHN82975.1| farnesyl diphosphate synthase [Escherichia coli H494]
gi|375323530|gb|EHS69238.1| geranyltranstransferase [Escherichia coli O157:H43 str. T22]
gi|378018821|gb|EHV81667.1| farnesyl diphosphate synthase [Escherichia coli DEC7A]
gi|378027870|gb|EHV90495.1| geranyltranstransferase [Escherichia coli DEC7C]
gi|378032384|gb|EHV94965.1| geranyltranstransferase [Escherichia coli DEC7D]
gi|378042317|gb|EHW04766.1| farnesyl diphosphate synthase [Escherichia coli DEC7E]
gi|378052734|gb|EHW15036.1| farnesyl diphosphate synthase [Escherichia coli DEC8A]
gi|378057134|gb|EHW19369.1| geranyltranstransferase [Escherichia coli DEC8B]
gi|378063072|gb|EHW25242.1| geranyltranstransferase [Escherichia coli DEC8C]
gi|378069167|gb|EHW31262.1| geranyltranstransferase [Escherichia coli DEC8D]
gi|378072735|gb|EHW34792.1| geranyltranstransferase [Escherichia coli DEC8E]
gi|378081844|gb|EHW43792.1| geranyltranstransferase [Escherichia coli DEC9A]
gi|378082758|gb|EHW44701.1| geranyltranstransferase [Escherichia coli DEC9B]
gi|378090486|gb|EHW52323.1| geranyltranstransferase [Escherichia coli DEC9C]
gi|378095180|gb|EHW56970.1| geranyltranstransferase [Escherichia coli DEC9D]
gi|378102744|gb|EHW64417.1| geranyltranstransferase [Escherichia coli DEC9E]
gi|378107878|gb|EHW69496.1| geranyltranstransferase [Escherichia coli DEC10A]
gi|378116900|gb|EHW78418.1| geranyltranstransferase [Escherichia coli DEC10B]
gi|378119416|gb|EHW80911.1| geranyltranstransferase [Escherichia coli DEC10C]
gi|378121684|gb|EHW83135.1| geranyltranstransferase [Escherichia coli DEC10D]
gi|378136516|gb|EHW97810.1| geranyltranstransferase [Escherichia coli DEC11A]
gi|378139962|gb|EHX01192.1| geranyltranstransferase [Escherichia coli DEC10F]
gi|378147330|gb|EHX08478.1| geranyltranstransferase [Escherichia coli DEC11B]
gi|378153072|gb|EHX14158.1| farnesyl diphosphate synthase [Escherichia coli DEC11D]
gi|378157236|gb|EHX18278.1| farnesyl diphosphate synthase [Escherichia coli DEC11C]
gi|378161692|gb|EHX22668.1| farnesyl diphosphate synthase [Escherichia coli DEC11E]
gi|378175081|gb|EHX35900.1| farnesyl diphosphate synthase [Escherichia coli DEC12A]
gi|378175586|gb|EHX36402.1| geranyltranstransferase [Escherichia coli DEC12B]
gi|378177079|gb|EHX37880.1| farnesyl diphosphate synthase [Escherichia coli DEC12C]
gi|378190564|gb|EHX51148.1| geranyltranstransferase [Escherichia coli DEC13A]
gi|378191124|gb|EHX51700.1| geranyltranstransferase [Escherichia coli DEC12E]
gi|378191936|gb|EHX52510.1| geranyltranstransferase [Escherichia coli DEC12D]
gi|378204160|gb|EHX64576.1| geranyltranstransferase [Escherichia coli DEC13B]
gi|378208309|gb|EHX68693.1| geranyltranstransferase [Escherichia coli DEC13D]
gi|378209317|gb|EHX69691.1| geranyltranstransferase [Escherichia coli DEC13C]
gi|378219606|gb|EHX79873.1| geranyltranstransferase [Escherichia coli DEC13E]
gi|378221909|gb|EHX82151.1| farnesyl diphosphate synthase [Escherichia coli DEC14A]
gi|383394303|gb|AFH19261.1| geranyltranstransferase [Escherichia coli KO11FL]
gi|383403912|gb|AFH10155.1| geranyltranstransferase [Escherichia coli W]
gi|383474538|gb|EID66523.1| Polyprenyl synthetase [Escherichia coli W26]
gi|385704837|gb|EIG41909.1| farnesyl diphosphate synthase [Escherichia coli B799]
gi|386153498|gb|EIH04787.1| polyprenyl synthetase [Escherichia coli 5.0588]
gi|386169900|gb|EIH36408.1| polyprenyl synthetase [Escherichia coli 96.0497]
gi|386178500|gb|EIH55979.1| polyprenyl synthetase [Escherichia coli 3.2608]
gi|386186359|gb|EIH69075.1| polyprenyl synthetase [Escherichia coli 93.0624]
gi|386191691|gb|EIH80432.1| polyprenyl synthetase [Escherichia coli 4.0522]
gi|386193191|gb|EIH87490.1| polyprenyl synthetase [Escherichia coli JB1-95]
gi|386217397|gb|EII33886.1| polyprenyl synthetase [Escherichia coli 4.0967]
gi|386230285|gb|EII57640.1| polyprenyl synthetase [Escherichia coli 3.3884]
gi|386256997|gb|EIJ12488.1| polyprenyl synthetase [Escherichia coli 900105 (10e)]
gi|388341932|gb|EIL08009.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9534]
gi|388345201|gb|EIL10987.1| geranyltranstransferase [Escherichia coli O103:H25 str. CVM9340]
gi|388346459|gb|EIL12176.1| geranyltranstransferase [Escherichia coli O103:H2 str. CVM9450]
gi|388360332|gb|EIL24553.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9570]
gi|388361254|gb|EIL25388.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9545]
gi|388368641|gb|EIL32266.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9574]
gi|388375260|gb|EIL38286.1| polyprenyl synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|388377654|gb|EIL40449.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM9942]
gi|388394259|gb|EIL55562.1| geranyltranstransferase [Escherichia coli 541-15]
gi|388406286|gb|EIL66692.1| geranyltranstransferase [Escherichia coli 541-1]
gi|391254771|gb|EIQ13930.1| farnesyl diphosphate synthase [Shigella flexneri 2850-71]
gi|391309567|gb|EIQ67235.1| farnesyl diphosphate synthase [Escherichia coli EPECa12]
gi|391315302|gb|EIQ72835.1| geranyltranstransferase [Escherichia coli EPEC C342-62]
gi|394390747|gb|EJE67707.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9602]
gi|394394594|gb|EJE71157.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM10224]
gi|394399959|gb|EJE75920.1| geranyltranstransferase [Escherichia coli O111:H8 str. CVM9634]
gi|394405903|gb|EJE81000.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9553]
gi|394409074|gb|EJE83661.1| geranyltranstransferase [Escherichia coli O111:H11 str. CVM9455]
gi|394412013|gb|EJE86193.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM10021]
gi|394431082|gb|EJF03325.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM10030]
gi|394433345|gb|EJF05377.1| geranyltranstransferase [Escherichia coli O26:H11 str. CVM9952]
gi|397786900|gb|EJK97731.1| geranyltranstransferase [Escherichia coli STEC_O31]
gi|406779118|gb|AFS58542.1| geranyltranstransferase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407055699|gb|AFS75750.1| geranyltranstransferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063902|gb|AFS84949.1| geranyltranstransferase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408310070|gb|EKJ27154.1| geranyltranstransferase [Escherichia coli EC1865]
gi|408347892|gb|EKJ62035.1| geranyltranstransferase [Escherichia coli 0.1288]
gi|412961670|emb|CCK45577.1| geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
coli chi7122]
gi|412968285|emb|CCJ42902.1| geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
coli]
gi|421934170|gb|EKT91947.1| geranyltranstransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421945338|gb|EKU02555.1| geranyltranstransferase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421946774|gb|EKU03888.1| geranyltranstransferase [Escherichia coli O111:H8 str. CFSAN001632]
gi|429351527|gb|EKY88247.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02030]
gi|429352230|gb|EKY88946.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429352988|gb|EKY89697.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02092]
gi|429366901|gb|EKZ03502.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02093]
gi|429367812|gb|EKZ04404.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02281]
gi|429370307|gb|EKZ06873.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02318]
gi|429382694|gb|EKZ19158.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-02913]
gi|429384927|gb|EKZ21381.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-03943]
gi|429385450|gb|EKZ21903.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-03439]
gi|429397143|gb|EKZ33490.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
11-04080]
gi|429399371|gb|EKZ35692.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429399679|gb|EKZ35999.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429410433|gb|EKZ46655.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429412333|gb|EKZ48530.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429419318|gb|EKZ55456.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429427877|gb|EKZ63957.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429434721|gb|EKZ70745.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429435545|gb|EKZ71563.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429440086|gb|EKZ76065.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429444686|gb|EKZ80631.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429450991|gb|EKZ86883.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456483|gb|EKZ92328.1| farnesyl diphosphate synthase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430901405|gb|ELC23373.1| farnesyl diphosphate synthase [Escherichia coli KTE12]
gi|431010799|gb|ELD25143.1| farnesyl diphosphate synthase [Escherichia coli KTE210]
gi|431300612|gb|ELF90163.1| farnesyl diphosphate synthase [Escherichia coli KTE29]
gi|431357832|gb|ELG44498.1| farnesyl diphosphate synthase [Escherichia coli KTE91]
gi|431380168|gb|ELG65068.1| farnesyl diphosphate synthase [Escherichia coli KTE135]
gi|431388636|gb|ELG72359.1| farnesyl diphosphate synthase [Escherichia coli KTE136]
gi|431456788|gb|ELH37131.1| farnesyl diphosphate synthase [Escherichia coli KTE184]
gi|431651619|gb|ELJ18858.1| farnesyl diphosphate synthase [Escherichia coli KTE163]
gi|431663384|gb|ELJ30146.1| farnesyl diphosphate synthase [Escherichia coli KTE166]
gi|431721824|gb|ELJ85816.1| farnesyl diphosphate synthase [Escherichia coli KTE90]
gi|443420954|gb|AGC85858.1| geranyltranstransferase [Escherichia coli APEC O78]
gi|449322654|gb|EMD12637.1| geranyltranstransferase [Escherichia coli O08]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 52/238 (21%)
Query: 61 IQIDEYMTLKAKKINKALFEGAAVPL--------ILQYPTLPNHEGERVHGTLCIASCEL 112
+ Y T +IN+ L E A+P+ ++Y L +R +C+A+CEL
Sbjct: 34 FDLRTYWTTLITEINQKLDE--AIPVKHPAGIYEAMRYSVL-AQGAKRASPVMCVAACEL 90
Query: 113 VGGNESSVMPLACAAEML--------------------------------VTLALNRALL 140
GG+ + P ACA EM+ + L AL
Sbjct: 91 FGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLAGDALF 150
Query: 141 CYAVEHMATKT--KNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFI 198
H+ + T + V ++R I EI+ VG+ G+ AG+ +++ S F+
Sbjct: 151 PLGFHHIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLEGGPFPPS-----FV 205
Query: 199 KRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG 256
+ + G + E S VCG L+GG +E+++E LR+YG+ VG+ YQ DDI + +K AG
Sbjct: 206 QEKKFGAMGECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDITE--EKNNGAG 261
>gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
Length = 295
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 14/162 (8%)
Query: 158 RLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
R ++ + ++ A G+ G+ G+ +++ S G+ + +EL+ + RL+ G LI A+V G L
Sbjct: 136 RQLQMVHTLARASGSLGMAGGQAIDLQSVGQRIGQAELETMHRLKTGALIRAAVALGALS 195
Query: 218 GGGSEED-IEKLRKYGKCVGLAYQVWDDILD----------NMKKKKEAGDDEATYPKLM 266
++ + +L Y +GLA+QV DD+LD K +EA D+ TY KLM
Sbjct: 196 CPDLDDAALARLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDQEA--DKPTYVKLM 253
Query: 267 GVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
G+ A+ YA+ LVAEA Q L+ FD RA L LA F+ R
Sbjct: 254 GLNAARDYAERLVAEAQQALSGFD-ARADRLRQLAAFVTERR 294
>gi|71278749|ref|YP_267833.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
gi|71144489|gb|AAZ24962.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
Length = 300
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 89/157 (56%), Gaps = 10/157 (6%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V+ I ++ A G +G+ G+ +++ + GK++SL EL+ + L+ G L+EASV+ + G
Sbjct: 143 VKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALLEASVLMPAMCSG 202
Query: 220 GSEEDIE-KLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAG 270
+ + L +Y + +GLAYQV DDI+D ++E G +++TYP L+G+ G
Sbjct: 203 QVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIAANKSTYPALLGLQG 262
Query: 271 AKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
A+ A+ L+ +A Q L+ P L A F+V R
Sbjct: 263 AQDKAENLLQQALQALSRL-PYNTQSLADFATFIVKR 298
>gi|331006565|ref|ZP_08329857.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
gi|330419634|gb|EGG94008.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
Length = 224
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 20/191 (10%)
Query: 126 AAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
A + L A N +LC AV+ P ++ + +S A G G++ G+ +++ +
Sbjct: 43 AGDALQAFAFN--ILCEAVD--------ADPSIQLKMLHTLSHASGANGMVGGQSIDLAA 92
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG-GSEEDIEKLRKYGKCVGLAYQVWDD 244
+ ++L++L+ + RL+ G LI AS G L G SE ++ L +Y +GLA+QV DD
Sbjct: 93 VQQTLTLNQLETMHRLKTGALISASTRLGALSTGIASESQLQALHEYANAIGLAFQVQDD 152
Query: 245 ILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD K+ G D A TY L+G+ A++ AK L +A L+ FD RA
Sbjct: 153 ILDVTSDTHTLGKQQGADAALNKPTYIALLGLDAAQQKAKTLHEQALDALSGFD-YRADN 211
Query: 297 LYHLADFLVSR 307
L HL+ ++++R
Sbjct: 212 LRHLSAYIINR 222
>gi|416281026|ref|ZP_11645596.1| geranyltranstransferase [Shigella boydii ATCC 9905]
gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|383816721|ref|ZP_09972113.1| polyprenyl synthetase [Serratia sp. M24T3]
gi|383294433|gb|EIC82775.1| polyprenyl synthetase [Serratia sp. M24T3]
Length = 309
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 14/163 (8%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL I E++ A G G+ AG+ +++ ++G+ + L+ L+ I R + G LI A+V G L
Sbjct: 147 DRL-SMISELARASGVAGMCAGQALDLAAEGQQIDLNALELIHRHKTGALIRAAVRIGAL 205
Query: 217 IGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G D + L +Y + +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 206 AAGKPGRDALPMLDRYAEAIGLAFQVQDDILDVIGDTQTLGKRQGADQQLGKSTYPALLG 265
Query: 268 VAGAKRYAKELVAEAN---QELAYFDPTRAAPLYHLADFLVSR 307
+ GA+ AK+L EA ELA APL LA F++ R
Sbjct: 266 LEGAQAKAKDLYLEAVAALDELATHS-YNTAPLLALARFVIER 307
>gi|422343993|ref|ZP_16424920.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
gi|355377741|gb|EHG24950.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
Length = 291
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 125 CAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + L+TLA L + K+V L+R + IS A G G++ G+++++
Sbjct: 110 LAGDALLTLAFTVLL----------RQKDVPAASLLRVVDVISRAAGAEGMVGGQVLDLQ 159
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++ K +SL EL + + G L A++ G ++GG SE+ + L Y GLA+Q+ DD
Sbjct: 160 AENKAISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLAALTAYADHFGLAFQITDD 219
Query: 245 ILDNMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + ++ G DE +TY L ++ A+ A+ V EA LA F + A+
Sbjct: 220 ILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELAQRTVDEALAALAVF-GSEASF 278
Query: 297 LYHLADFLVSRHK 309
L L +LV+R +
Sbjct: 279 LRELVSYLVNRKQ 291
>gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739]
gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|432678840|ref|ZP_19914243.1| farnesyl diphosphate synthase [Escherichia coli KTE143]
gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|431225033|gb|ELF22242.1| farnesyl diphosphate synthase [Escherichia coli KTE143]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLEALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1]
gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRATVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|399053798|ref|ZP_10742597.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|433542484|ref|ZP_20498911.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
gi|398048575|gb|EJL41047.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|432186295|gb|ELK43769.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
Length = 297
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 138 ALLCYAVEHMA---TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSE 194
ALL A ++A + +V+P V+ I E+ G G++ G++ +I +GK + L +
Sbjct: 116 ALLTRAFAYIAEAYQERSDVAPITTVKLIAELGKRAGATGMVGGQMADIEGEGKQLDLEQ 175
Query: 195 LDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMK 250
L+FI R + G L+ A++ G + SE ++ L +YG C+GLA+Q+ DDIL D +
Sbjct: 176 LEFIHRHKTGDLLVAALRGGGYLAEASEAQMDALTRYGVCIGLAFQIQDDILNVEGDAAE 235
Query: 251 KKKEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVS 306
K G D + TYP L+G+A +K L+AEA LA +A L LAD++ +
Sbjct: 236 LGKAVGSDADREKVTYPSLLGLAESKERLTALIAEAKAALADAGIEHSA-LSPLADYVQN 294
Query: 307 RHK 309
R+K
Sbjct: 295 RNK 297
>gi|379011176|ref|YP_005268988.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
gi|375301965|gb|AFA48099.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
Length = 298
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 111/255 (43%), Gaps = 44/255 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + +C + G+ + PLA EM+ T +L
Sbjct: 45 GKRLRPILMMETCRALEGDVELIKPLAMGIEMIHTYSLIHDDLPAMDNDDLRRGKATNHK 104
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVR---AIGEISSAVGTRGVLAGRIME 182
LL YA E M N+S D LV A+ I A G RG++ G++ +
Sbjct: 105 VYGDAMAILAGDGLLNYAAETMLAGAHNLSGDTLVNYLNAMKSIMGAAGIRGMIGGQVAD 164
Query: 183 INSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVW 242
+ S+ K + L E+++I + L+EA V G +I G +L Y +GLA+Q+
Sbjct: 165 MLSENKIIDLDEMNYIHLHKTAALLEACVQSGCIIAGAEPATQGRLISYSHRIGLAFQIV 224
Query: 243 DDIL----DNMKKKKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRA 294
DDIL D + K G DE +T+ L G+ +K EL EA + L P R
Sbjct: 225 DDILDIEGDEVDLGKPIGSDEKNHKSTFVSLYGLEASKIRVTELETEAIELLKPIGP-RT 283
Query: 295 APLYHLADFLVSRHK 309
A L LA ++ R K
Sbjct: 284 AFLSQLATYICRRRK 298
>gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
Thiolodiphosphate
gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
Thiolodiphosphate
Length = 300
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 134 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 193
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 194 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 253
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 254 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 300
>gi|417705940|ref|ZP_12355007.1| geranyltranstransferase [Shigella flexneri VA-6]
gi|420329708|ref|ZP_14831413.1| farnesyl diphosphate synthase [Shigella flexneri K-1770]
gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6]
gi|391259238|gb|EIQ18313.1| farnesyl diphosphate synthase [Shigella flexneri K-1770]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|456011703|gb|EMF45440.1| Octaprenyl-diphosphate synthase [Planococcus halocryophilus Or1]
Length = 293
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL Y+ +A + ++VS D VR I +S + G G++ G++++I + K + L EL+
Sbjct: 116 ALLTYSFGVVA-RLEHVSSDDKVRLIDLMSVSAGAEGMVGGQVLDIEGEEKQLQLEELEQ 174
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKK 253
+ RL+ G L+ S++ G ++ + E+I L ++G+ +GLA+Q+ DDILD + + K
Sbjct: 175 VHRLKTGALLTYSILAGGILAQATNEEIVALSQFGQHLGLAFQIQDDILDVTGTSQELGK 234
Query: 254 EAGDDE----ATYPKLMGVAGAK 272
AG DE +TYP L+ + AK
Sbjct: 235 TAGKDESSEKSTYPSLLTLPKAK 257
>gi|416051604|ref|ZP_11577652.1| polyprenyl synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347993037|gb|EGY34414.1| polyprenyl synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 30/227 (13%)
Query: 91 PTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLALNRALLCYAVEHMATK 150
P + + E R H T C + ++++ A + L TLA + T
Sbjct: 88 PAMDDDELRRGHQT-----CHIAFDEATAIL----AGDALQTLAFE----------ILTD 128
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEAS 210
++S ++ + I +S+A G +G+ G+ +++ S+ K +SL EL+ I + G L+ A+
Sbjct: 129 IPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKTGALLAAA 188
Query: 211 VVCGVLIGGGSEED--IEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEAGD----DEA 260
+ G + + ++L +Y +GLA+QV DDIL D+ K AG D++
Sbjct: 189 LKMGFICSPHFADTALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTAGSDLTADKS 248
Query: 261 TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TYPKL+G+ GAK+ A+EL A EL P LY LA+F+V R
Sbjct: 249 TYPKLLGLEGAKQKAQELYQTALAELKNL-PFNTTALYALAEFIVKR 294
>gi|415777159|ref|ZP_11488411.1| geranyltranstransferase [Escherichia coli 3431]
gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431]
Length = 299
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T +S ++ + I +S+A G +G+ G+ +++ S+ K +SL EL+
Sbjct: 117 ALQAFAFE-ILTDIPTLSAEQKLALIKTLSAASGVKGMCLGQSLDLISEHKVISLQELEH 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEED--IEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I + G L+ A+++ G + E ++L +Y +GLA+QV DDILD +
Sbjct: 176 IHLNKTGALLTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGDSETI 235
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G+ GAK+ A+EL A EL P LY LA+F++ R
Sbjct: 236 GKTVGSDLTADKSTYPKLLGLEGAKQKAQELYEMALAELKDL-PFDTTALYALAEFIIKR 294
>gi|432635735|ref|ZP_19871621.1| farnesyl diphosphate synthase [Escherichia coli KTE81]
gi|431174017|gb|ELE74078.1| farnesyl diphosphate synthase [Escherichia coli KTE81]
Length = 299
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101]
gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M605]
gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA206]
gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H299]
gi|417288741|ref|ZP_12076026.1| polyprenyl synthetase [Escherichia coli TW07793]
gi|419699335|ref|ZP_14226951.1| geranyltranstransferase [Escherichia coli SCI-07]
gi|419915495|ref|ZP_14433860.1| geranyltranstransferase [Escherichia coli KD1]
gi|422378659|ref|ZP_16458866.1| polyprenyl synthetase [Escherichia coli MS 57-2]
gi|425298617|ref|ZP_18688667.1| geranyltranstransferase [Escherichia coli 07798]
gi|432380049|ref|ZP_19623013.1| farnesyl diphosphate synthase [Escherichia coli KTE15]
gi|432385878|ref|ZP_19628777.1| farnesyl diphosphate synthase [Escherichia coli KTE16]
gi|432396295|ref|ZP_19639087.1| farnesyl diphosphate synthase [Escherichia coli KTE25]
gi|432405291|ref|ZP_19648014.1| farnesyl diphosphate synthase [Escherichia coli KTE28]
gi|432439734|ref|ZP_19682097.1| farnesyl diphosphate synthase [Escherichia coli KTE189]
gi|432444858|ref|ZP_19687167.1| farnesyl diphosphate synthase [Escherichia coli KTE191]
gi|432464430|ref|ZP_19706538.1| farnesyl diphosphate synthase [Escherichia coli KTE205]
gi|432512629|ref|ZP_19749872.1| farnesyl diphosphate synthase [Escherichia coli KTE224]
gi|432582530|ref|ZP_19818940.1| farnesyl diphosphate synthase [Escherichia coli KTE57]
gi|432610155|ref|ZP_19846328.1| farnesyl diphosphate synthase [Escherichia coli KTE72]
gi|432644856|ref|ZP_19880659.1| farnesyl diphosphate synthase [Escherichia coli KTE86]
gi|432654431|ref|ZP_19890150.1| farnesyl diphosphate synthase [Escherichia coli KTE93]
gi|432697738|ref|ZP_19932910.1| farnesyl diphosphate synthase [Escherichia coli KTE169]
gi|432721984|ref|ZP_19956911.1| farnesyl diphosphate synthase [Escherichia coli KTE17]
gi|432726530|ref|ZP_19961413.1| farnesyl diphosphate synthase [Escherichia coli KTE18]
gi|432731143|ref|ZP_19965982.1| farnesyl diphosphate synthase [Escherichia coli KTE45]
gi|432740217|ref|ZP_19974939.1| farnesyl diphosphate synthase [Escherichia coli KTE23]
gi|432744358|ref|ZP_19979063.1| farnesyl diphosphate synthase [Escherichia coli KTE43]
gi|432758203|ref|ZP_19992726.1| farnesyl diphosphate synthase [Escherichia coli KTE46]
gi|432800704|ref|ZP_20034694.1| farnesyl diphosphate synthase [Escherichia coli KTE84]
gi|432893037|ref|ZP_20105142.1| farnesyl diphosphate synthase [Escherichia coli KTE165]
gi|432902754|ref|ZP_20112434.1| farnesyl diphosphate synthase [Escherichia coli KTE194]
gi|432942294|ref|ZP_20139636.1| farnesyl diphosphate synthase [Escherichia coli KTE183]
gi|432970598|ref|ZP_20159476.1| farnesyl diphosphate synthase [Escherichia coli KTE207]
gi|432984113|ref|ZP_20172852.1| farnesyl diphosphate synthase [Escherichia coli KTE215]
gi|432989526|ref|ZP_20178196.1| farnesyl diphosphate synthase [Escherichia coli KTE217]
gi|433012595|ref|ZP_20200978.1| farnesyl diphosphate synthase [Escherichia coli KTE104]
gi|433022168|ref|ZP_20210194.1| farnesyl diphosphate synthase [Escherichia coli KTE106]
gi|433037357|ref|ZP_20224978.1| farnesyl diphosphate synthase [Escherichia coli KTE113]
gi|433071467|ref|ZP_20258169.1| farnesyl diphosphate synthase [Escherichia coli KTE129]
gi|433081368|ref|ZP_20267843.1| farnesyl diphosphate synthase [Escherichia coli KTE133]
gi|433099969|ref|ZP_20286081.1| farnesyl diphosphate synthase [Escherichia coli KTE145]
gi|433109673|ref|ZP_20295553.1| farnesyl diphosphate synthase [Escherichia coli KTE150]
gi|433118968|ref|ZP_20304682.1| farnesyl diphosphate synthase [Escherichia coli KTE157]
gi|433142983|ref|ZP_20328162.1| farnesyl diphosphate synthase [Escherichia coli KTE168]
gi|433181951|ref|ZP_20366254.1| farnesyl diphosphate synthase [Escherichia coli KTE85]
gi|433187226|ref|ZP_20371355.1| farnesyl diphosphate synthase [Escherichia coli KTE88]
gi|433324515|ref|ZP_20401802.1| geranyltranstransferase [Escherichia coli J96]
gi|450185724|ref|ZP_21889194.1| geranyltranstransferase [Escherichia coli SEPT362]
gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101]
gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2]
gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M605]
gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA206]
gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H299]
gi|380349350|gb|EIA37622.1| geranyltranstransferase [Escherichia coli SCI-07]
gi|386247533|gb|EII93706.1| polyprenyl synthetase [Escherichia coli TW07793]
gi|388383839|gb|EIL45587.1| geranyltranstransferase [Escherichia coli KD1]
gi|408221620|gb|EKI45553.1| geranyltranstransferase [Escherichia coli 07798]
gi|430909927|gb|ELC31285.1| farnesyl diphosphate synthase [Escherichia coli KTE16]
gi|430912028|gb|ELC33279.1| farnesyl diphosphate synthase [Escherichia coli KTE15]
gi|430918677|gb|ELC39678.1| farnesyl diphosphate synthase [Escherichia coli KTE25]
gi|430932787|gb|ELC53206.1| farnesyl diphosphate synthase [Escherichia coli KTE28]
gi|430969544|gb|ELC86648.1| farnesyl diphosphate synthase [Escherichia coli KTE189]
gi|430976233|gb|ELC93108.1| farnesyl diphosphate synthase [Escherichia coli KTE191]
gi|430997181|gb|ELD13448.1| farnesyl diphosphate synthase [Escherichia coli KTE205]
gi|431044949|gb|ELD55204.1| farnesyl diphosphate synthase [Escherichia coli KTE224]
gi|431119546|gb|ELE22545.1| farnesyl diphosphate synthase [Escherichia coli KTE57]
gi|431151468|gb|ELE52483.1| farnesyl diphosphate synthase [Escherichia coli KTE72]
gi|431184337|gb|ELE84095.1| farnesyl diphosphate synthase [Escherichia coli KTE86]
gi|431195616|gb|ELE94585.1| farnesyl diphosphate synthase [Escherichia coli KTE93]
gi|431246932|gb|ELF41175.1| farnesyl diphosphate synthase [Escherichia coli KTE169]
gi|431268346|gb|ELF59820.1| farnesyl diphosphate synthase [Escherichia coli KTE17]
gi|431276638|gb|ELF67658.1| farnesyl diphosphate synthase [Escherichia coli KTE18]
gi|431278547|gb|ELF69537.1| farnesyl diphosphate synthase [Escherichia coli KTE45]
gi|431286346|gb|ELF77172.1| farnesyl diphosphate synthase [Escherichia coli KTE23]
gi|431295812|gb|ELF85544.1| farnesyl diphosphate synthase [Escherichia coli KTE43]
gi|431311989|gb|ELG00137.1| farnesyl diphosphate synthase [Escherichia coli KTE46]
gi|431351293|gb|ELG38083.1| farnesyl diphosphate synthase [Escherichia coli KTE84]
gi|431425489|gb|ELH07559.1| farnesyl diphosphate synthase [Escherichia coli KTE165]
gi|431437399|gb|ELH18909.1| farnesyl diphosphate synthase [Escherichia coli KTE194]
gi|431454762|gb|ELH35120.1| farnesyl diphosphate synthase [Escherichia coli KTE183]
gi|431485735|gb|ELH65392.1| farnesyl diphosphate synthase [Escherichia coli KTE207]
gi|431498771|gb|ELH77956.1| farnesyl diphosphate synthase [Escherichia coli KTE217]
gi|431506250|gb|ELH84848.1| farnesyl diphosphate synthase [Escherichia coli KTE215]
gi|431535930|gb|ELI12265.1| farnesyl diphosphate synthase [Escherichia coli KTE104]
gi|431541053|gb|ELI16503.1| farnesyl diphosphate synthase [Escherichia coli KTE106]
gi|431555533|gb|ELI29373.1| farnesyl diphosphate synthase [Escherichia coli KTE113]
gi|431593654|gb|ELI63946.1| farnesyl diphosphate synthase [Escherichia coli KTE129]
gi|431606013|gb|ELI75397.1| farnesyl diphosphate synthase [Escherichia coli KTE133]
gi|431622835|gb|ELI91520.1| farnesyl diphosphate synthase [Escherichia coli KTE145]
gi|431631750|gb|ELJ00056.1| farnesyl diphosphate synthase [Escherichia coli KTE150]
gi|431649317|gb|ELJ16675.1| farnesyl diphosphate synthase [Escherichia coli KTE157]
gi|431666671|gb|ELJ33298.1| farnesyl diphosphate synthase [Escherichia coli KTE168]
gi|431709772|gb|ELJ74220.1| farnesyl diphosphate synthase [Escherichia coli KTE88]
gi|431711847|gb|ELJ76154.1| farnesyl diphosphate synthase [Escherichia coli KTE85]
gi|432347029|gb|ELL41493.1| geranyltranstransferase [Escherichia coli J96]
gi|449324905|gb|EMD14825.1| geranyltranstransferase [Escherichia coli SEPT362]
Length = 299
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 113/226 (50%), Gaps = 41/226 (18%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L A+ + G + + ACA EM+ T +L
Sbjct: 45 GKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHK 104
Query: 136 ----------NRALLCYAVEH-MATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
LL YA + MA + K +S ++ VR + E++ A G G++ G++ ++
Sbjct: 105 VFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADME 164
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++G+ +++ EL++I + + GKL+E +V+ G ++ +EE + L + K +GLA+Q+ DD
Sbjct: 165 AEGELLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEKNLLTFAKYIGLAFQIRDD 224
Query: 245 ILDNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEA 282
ILD ++E G ++++TY L V AK ++ +A+A
Sbjct: 225 ILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEDTIAKA 270
>gi|253687426|ref|YP_003016616.1| polyprenyl synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 303
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL I E++ A G G+ G+ ++ ++G V L+ L+ I R + G LI A+V G L
Sbjct: 138 DRLA-MISELAQASGVAGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGAL 196
Query: 217 IGGGS-EEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + + L +Y +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 197 ASGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLG 256
Query: 268 VAGAKRYAKELVAEANQELAYFD--------PTRAAPLYHLADFLVSRHK 309
+ A++ A+EL E+ LA D P APL LA+F+V R K
Sbjct: 257 LDNARKKAQELYQES---LASLDDLVTSSPIPLNIAPLQALANFIVERDK 303
>gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a]
gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKAQDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|337737298|ref|YP_004636745.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
gi|384458806|ref|YP_005671226.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|336291039|gb|AEI32173.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
Length = 289
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 50/269 (18%)
Query: 55 NNPFPEIQIDEYMT--LKAK-KINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCE 111
NN + +++EY++ + K NK ++E L N G+RV L +AS
Sbjct: 2 NNKVIKKEVEEYLSRYFEGKDNYNKRVYESMNYSL--------NAGGKRVRPLLLLASYA 53
Query: 112 LVGGNESSVMPLACAAEMLVTLAL-------------------NRALLCYAVEHMA---- 148
+ + V+ +A A EM+ T +L N + Y++ +A
Sbjct: 54 IYNKDYKEVIDIAAAIEMIHTYSLIHDDLPCMDNDDLRRGRPTNHKIFGYSIALLAGDGL 113
Query: 149 -TKTKNV-------SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKR 200
+ N+ + ++A IS A + G++ G++++I S+GK ++ EL ++ +
Sbjct: 114 LNEAMNIMFKYCIGKGEEALKACLMISKAASSDGMIGGQVVDILSEGKKINEDELRYMHK 173
Query: 201 LRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG---- 256
+ G+LI+A+VV G ++GG D+E L +YG +GLA+Q+ DDILD + K G
Sbjct: 174 KKTGELIKAAVVSGAILGGAPLHDVELLSQYGDKLGLAFQIEDDILDIIGDTKIMGKTSK 233
Query: 257 ----DDEATYPKLMGVAGAKRYAKELVAE 281
+D+ TY L G+ K +EL E
Sbjct: 234 SDLENDKCTYVTLYGIDKCKSICRELTDE 262
>gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012]
gi|417674759|ref|ZP_12324192.1| geranyltranstransferase [Shigella dysenteriae 155-74]
gi|417688182|ref|ZP_12337428.1| geranyltranstransferase [Shigella boydii 5216-82]
gi|420345475|ref|ZP_14846907.1| farnesyl diphosphate synthase [Shigella boydii 965-58]
gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012]
gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74]
gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82]
gi|391276359|gb|EIQ35131.1| farnesyl diphosphate synthase [Shigella boydii 965-58]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl
Pyrophosphate Synthase Complex With An Isopentenyl
Pyrophosphate
gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl
Pyrophosphate Synthase Complex With An Isopentenyl
Pyrophosphate
Length = 323
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 157 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 216
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 217 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 276
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 277 LLGLEQARKKARDLIDDARQALKQLAEQSLDTSALEALADYIIQRNK 323
>gi|423068068|ref|ZP_17056856.1| hypothetical protein HMPREF9682_00077 [Streptococcus intermedius
F0395]
gi|355366959|gb|EHG14672.1| hypothetical protein HMPREF9682_00077 [Streptococcus intermedius
F0395]
Length = 300
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 160 VRA--IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
+RA I E+S A GT G++ G+++++ +G+ VSL EL I + GKL+ + LI
Sbjct: 130 IRANLIAELSQAAGTFGMVGGQVLDMQGEGRSVSLEELQVIHANKTGKLLTYPFIAAGLI 189
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK--------KKEAGDDEATYPKLMGVA 269
+E EKLRK G+ +GLA+QV DDILD +K+ +ATYP ++G+
Sbjct: 190 AELAEPQQEKLRKTGQLLGLAFQVRDDILDETASFEDLGKTPQKDVAAGKATYPAILGLD 249
Query: 270 GAKRYAKELVAEANQELA 287
GAK + +E ++ A LA
Sbjct: 250 GAKHFFEEQLSAAEILLA 267
>gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536]
gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11]
gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|422378053|ref|ZP_16458276.1| polyprenyl synthetase [Escherichia coli MS 60-1]
gi|432469854|ref|ZP_19711907.1| farnesyl diphosphate synthase [Escherichia coli KTE206]
gi|432712142|ref|ZP_19947194.1| farnesyl diphosphate synthase [Escherichia coli KTE8]
gi|433076619|ref|ZP_20263185.1| farnesyl diphosphate synthase [Escherichia coli KTE131]
gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536]
gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11]
gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1]
gi|430999921|gb|ELD15995.1| farnesyl diphosphate synthase [Escherichia coli KTE206]
gi|431259657|gb|ELF52020.1| farnesyl diphosphate synthase [Escherichia coli KTE8]
gi|431601196|gb|ELI70713.1| farnesyl diphosphate synthase [Escherichia coli KTE131]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLTEQSLDTSALEALADYIIQRNK 299
>gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046]
gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197]
gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5]
gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638]
gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A]
gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1]
gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11]
gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39]
gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026]
gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952]
gi|251783926|ref|YP_002998230.1| farnesyl diphosphate synthase / geranyl diphosphate synthase
[Escherichia coli BL21(DE3)]
gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606]
gi|254287291|ref|YP_003053039.1| geranyltranstransferase [Escherichia coli BL21(DE3)]
gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412]
gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185]
gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50]
gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302]
gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617]
gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70]
gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H736]
gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M718]
gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA143]
gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA280]
gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9]
gi|383177002|ref|YP_005455007.1| geranyltranstransferase [Shigella sonnei 53G]
gi|386279447|ref|ZP_10057128.1| farnesyl diphosphate synthase [Escherichia sp. 4_1_40B]
gi|386596703|ref|YP_006093103.1| polyprenyl synthetase [Escherichia coli DH1]
gi|386612615|ref|YP_006132281.1| geranyltranstransferase [Escherichia coli UMNK88]
gi|386622787|ref|YP_006142515.1| geranyltranstransferase [Escherichia coli O7:K1 str. CE10]
gi|386703638|ref|YP_006167485.1| geranylgeranyl pyrophosphate synthase [Escherichia coli P12b]
gi|387605931|ref|YP_006094787.1| geranyltranstransferase [Escherichia coli 042]
gi|387610947|ref|YP_006114063.1| geranyltranstransferase [Escherichia coli ETEC H10407]
gi|387620180|ref|YP_006127807.1| geranyltranstransferase [Escherichia coli DH1]
gi|388476527|ref|YP_488713.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110]
gi|404373743|ref|ZP_10978978.1| farnesyl diphosphate synthase [Escherichia sp. 1_1_43]
gi|414574626|ref|ZP_11431835.1| farnesyl diphosphate synthase [Shigella sonnei 3233-85]
gi|415814577|ref|ZP_11506175.1| geranyltranstransferase [Escherichia coli LT-68]
gi|415852325|ref|ZP_11528701.1| geranyltranstransferase [Shigella sonnei 53G]
gi|416341362|ref|ZP_11675985.1| geranyltranstransferase [Escherichia coli EC4100B]
gi|417121125|ref|ZP_11970579.1| polyprenyl synthetase [Escherichia coli 97.0246]
gi|417139505|ref|ZP_11982927.1| polyprenyl synthetase [Escherichia coli 97.0259]
gi|417144610|ref|ZP_11986416.1| polyprenyl synthetase [Escherichia coli 1.2264]
gi|417168623|ref|ZP_12001074.1| polyprenyl synthetase [Escherichia coli 99.0741]
gi|417224952|ref|ZP_12028243.1| polyprenyl synthetase [Escherichia coli 96.154]
gi|417230426|ref|ZP_12032012.1| polyprenyl synthetase [Escherichia coli 5.0959]
gi|417246574|ref|ZP_12039675.1| polyprenyl synthetase [Escherichia coli 9.0111]
gi|417260630|ref|ZP_12048128.1| polyprenyl synthetase [Escherichia coli 2.3916]
gi|417270494|ref|ZP_12057847.1| polyprenyl synthetase [Escherichia coli 2.4168]
gi|417275410|ref|ZP_12062747.1| polyprenyl synthetase [Escherichia coli 3.2303]
gi|417292993|ref|ZP_12080273.1| polyprenyl synthetase [Escherichia coli B41]
gi|417306920|ref|ZP_12093800.1| Geranyltranstransferase [Escherichia coli PCN033]
gi|417585215|ref|ZP_12235995.1| geranyltranstransferase [Escherichia coli STEC_C165-02]
gi|417600698|ref|ZP_12251283.1| geranyltranstransferase [Escherichia coli STEC_94C]
gi|417606408|ref|ZP_12256937.1| geranyltranstransferase [Escherichia coli STEC_DG131-3]
gi|417611453|ref|ZP_12261927.1| geranyltranstransferase [Escherichia coli STEC_EH250]
gi|417616809|ref|ZP_12267243.1| geranyltranstransferase [Escherichia coli G58-1]
gi|417632905|ref|ZP_12283126.1| geranyltranstransferase [Escherichia coli STEC_S1191]
gi|417945761|ref|ZP_12588990.1| geranyltranstransferase [Escherichia coli XH140A]
gi|417976607|ref|ZP_12617399.1| geranyltranstransferase [Escherichia coli XH001]
gi|418262453|ref|ZP_12883832.1| geranyltranstransferase [Shigella sonnei str. Moseley]
gi|418301271|ref|ZP_12913065.1| geranyltranstransferase [Escherichia coli UMNF18]
gi|418959286|ref|ZP_13511185.1| polyprenyl synthetase [Escherichia coli J53]
gi|419140951|ref|ZP_13685708.1| farnesyl diphosphate synthase [Escherichia coli DEC6A]
gi|419146399|ref|ZP_13691095.1| geranyltranstransferase [Escherichia coli DEC6B]
gi|419152252|ref|ZP_13696840.1| farnesyl diphosphate synthase [Escherichia coli DEC6C]
gi|419157760|ref|ZP_13702286.1| farnesyl diphosphate synthase [Escherichia coli DEC6D]
gi|419162693|ref|ZP_13707173.1| geranyltranstransferase [Escherichia coli DEC6E]
gi|419173784|ref|ZP_13717640.1| geranyltranstransferase [Escherichia coli DEC7B]
gi|419276538|ref|ZP_13818808.1| geranyltranstransferase [Escherichia coli DEC10E]
gi|419373886|ref|ZP_13914942.1| geranyltranstransferase [Escherichia coli DEC14B]
gi|419379303|ref|ZP_13920284.1| geranyltranstransferase [Escherichia coli DEC14C]
gi|419384560|ref|ZP_13925464.1| geranyltranstransferase [Escherichia coli DEC14D]
gi|419805606|ref|ZP_14330738.1| polyprenyl synthetase [Escherichia coli AI27]
gi|419811836|ref|ZP_14336708.1| geranyltranstransferase [Escherichia coli O32:H37 str. P4]
gi|419916862|ref|ZP_14435146.1| geranyltranstransferase [Escherichia coli KD2]
gi|419937127|ref|ZP_14454042.1| geranyltranstransferase [Escherichia coli 576-1]
gi|419941409|ref|ZP_14458097.1| geranyltranstransferase [Escherichia coli 75]
gi|419948944|ref|ZP_14465207.1| geranyltranstransferase [Escherichia coli CUMT8]
gi|420334587|ref|ZP_14836209.1| farnesyl diphosphate synthase [Shigella flexneri K-315]
gi|420357038|ref|ZP_14858054.1| farnesyl diphosphate synthase [Shigella sonnei 3226-85]
gi|420362087|ref|ZP_14863013.1| geranyltranstransferase [Shigella sonnei 4822-66]
gi|421776012|ref|ZP_16212618.1| polyprenyl synthetase [Escherichia coli AD30]
gi|422355351|ref|ZP_16436067.1| polyprenyl synthetase [Escherichia coli MS 117-3]
gi|422769649|ref|ZP_16823340.1| polyprenyl synthetase [Escherichia coli E482]
gi|422785027|ref|ZP_16837766.1| polyprenyl synthetase [Escherichia coli H489]
gi|422791225|ref|ZP_16843928.1| polyprenyl synthetase [Escherichia coli TA007]
gi|422816435|ref|ZP_16864650.1| farnesyl diphosphate synthase [Escherichia coli M919]
gi|422974742|ref|ZP_16976443.1| farnesyl diphosphate synthase [Escherichia coli TA124]
gi|423701202|ref|ZP_17675661.1| farnesyl diphosphate synthase [Escherichia coli H730]
gi|425113748|ref|ZP_18515586.1| farnesyl diphosphate synthase [Escherichia coli 8.0566]
gi|425118514|ref|ZP_18520249.1| farnesyl diphosphate synthase [Escherichia coli 8.0569]
gi|425271116|ref|ZP_18662630.1| farnesyl diphosphate synthase [Escherichia coli TW15901]
gi|425281788|ref|ZP_18672909.1| farnesyl diphosphate synthase [Escherichia coli TW00353]
gi|425286978|ref|ZP_18677913.1| farnesyl diphosphate synthase [Escherichia coli 3006]
gi|425303923|ref|ZP_18693712.1| farnesyl diphosphate synthase [Escherichia coli N1]
gi|432352084|ref|ZP_19595393.1| farnesyl diphosphate synthase [Escherichia coli KTE2]
gi|432368400|ref|ZP_19611505.1| farnesyl diphosphate synthase [Escherichia coli KTE10]
gi|432390349|ref|ZP_19633213.1| farnesyl diphosphate synthase [Escherichia coli KTE21]
gi|432400533|ref|ZP_19643293.1| farnesyl diphosphate synthase [Escherichia coli KTE26]
gi|432415373|ref|ZP_19658004.1| farnesyl diphosphate synthase [Escherichia coli KTE44]
gi|432429570|ref|ZP_19672030.1| farnesyl diphosphate synthase [Escherichia coli KTE181]
gi|432453251|ref|ZP_19695491.1| farnesyl diphosphate synthase [Escherichia coli KTE193]
gi|432459392|ref|ZP_19701556.1| farnesyl diphosphate synthase [Escherichia coli KTE204]
gi|432474441|ref|ZP_19716454.1| farnesyl diphosphate synthase [Escherichia coli KTE208]
gi|432484149|ref|ZP_19726073.1| farnesyl diphosphate synthase [Escherichia coli KTE212]
gi|432492717|ref|ZP_19734556.1| farnesyl diphosphate synthase [Escherichia coli KTE213]
gi|432521058|ref|ZP_19758223.1| farnesyl diphosphate synthase [Escherichia coli KTE228]
gi|432529789|ref|ZP_19766833.1| farnesyl diphosphate synthase [Escherichia coli KTE233]
gi|432532610|ref|ZP_19769610.1| farnesyl diphosphate synthase [Escherichia coli KTE234]
gi|432541275|ref|ZP_19778150.1| farnesyl diphosphate synthase [Escherichia coli KTE235]
gi|432541797|ref|ZP_19778658.1| farnesyl diphosphate synthase [Escherichia coli KTE236]
gi|432547141|ref|ZP_19783938.1| farnesyl diphosphate synthase [Escherichia coli KTE237]
gi|432562331|ref|ZP_19798958.1| farnesyl diphosphate synthase [Escherichia coli KTE51]
gi|432579098|ref|ZP_19815532.1| farnesyl diphosphate synthase [Escherichia coli KTE56]
gi|432600938|ref|ZP_19837193.1| farnesyl diphosphate synthase [Escherichia coli KTE66]
gi|432620524|ref|ZP_19856570.1| farnesyl diphosphate synthase [Escherichia coli KTE76]
gi|432626005|ref|ZP_19861990.1| farnesyl diphosphate synthase [Escherichia coli KTE77]
gi|432629991|ref|ZP_19865941.1| farnesyl diphosphate synthase [Escherichia coli KTE80]
gi|432639540|ref|ZP_19875385.1| farnesyl diphosphate synthase [Escherichia coli KTE83]
gi|432659663|ref|ZP_19895324.1| farnesyl diphosphate synthase [Escherichia coli KTE111]
gi|432664609|ref|ZP_19900205.1| farnesyl diphosphate synthase [Escherichia coli KTE116]
gi|432669353|ref|ZP_19904902.1| farnesyl diphosphate synthase [Escherichia coli KTE119]
gi|432690311|ref|ZP_19925557.1| farnesyl diphosphate synthase [Escherichia coli KTE161]
gi|432702993|ref|ZP_19938119.1| farnesyl diphosphate synthase [Escherichia coli KTE171]
gi|432735947|ref|ZP_19970723.1| farnesyl diphosphate synthase [Escherichia coli KTE42]
gi|432763709|ref|ZP_19998161.1| farnesyl diphosphate synthase [Escherichia coli KTE48]
gi|432769222|ref|ZP_20003595.1| farnesyl diphosphate synthase [Escherichia coli KTE50]
gi|432773601|ref|ZP_20007891.1| farnesyl diphosphate synthase [Escherichia coli KTE54]
gi|432791670|ref|ZP_20025764.1| farnesyl diphosphate synthase [Escherichia coli KTE78]
gi|432797637|ref|ZP_20031665.1| farnesyl diphosphate synthase [Escherichia coli KTE79]
gi|432812530|ref|ZP_20046379.1| farnesyl diphosphate synthase [Escherichia coli KTE101]
gi|432813917|ref|ZP_20047728.1| farnesyl diphosphate synthase [Escherichia coli KTE115]
gi|432837970|ref|ZP_20071463.1| farnesyl diphosphate synthase [Escherichia coli KTE140]
gi|432848199|ref|ZP_20080071.1| farnesyl diphosphate synthase [Escherichia coli KTE144]
gi|432859077|ref|ZP_20085251.1| farnesyl diphosphate synthase [Escherichia coli KTE146]
gi|432873083|ref|ZP_20092781.1| farnesyl diphosphate synthase [Escherichia coli KTE147]
gi|432879913|ref|ZP_20096733.1| farnesyl diphosphate synthase [Escherichia coli KTE154]
gi|432884387|ref|ZP_20099343.1| farnesyl diphosphate synthase [Escherichia coli KTE158]
gi|432910107|ref|ZP_20117234.1| farnesyl diphosphate synthase [Escherichia coli KTE190]
gi|432945087|ref|ZP_20141382.1| farnesyl diphosphate synthase [Escherichia coli KTE196]
gi|432953554|ref|ZP_20145853.1| farnesyl diphosphate synthase [Escherichia coli KTE197]
gi|432959805|ref|ZP_20150091.1| farnesyl diphosphate synthase [Escherichia coli KTE202]
gi|432966528|ref|ZP_20155448.1| farnesyl diphosphate synthase [Escherichia coli KTE203]
gi|433017377|ref|ZP_20205648.1| farnesyl diphosphate synthase [Escherichia coli KTE105]
gi|433031857|ref|ZP_20219672.1| farnesyl diphosphate synthase [Escherichia coli KTE112]
gi|433041901|ref|ZP_20229436.1| farnesyl diphosphate synthase [Escherichia coli KTE117]
gi|433046492|ref|ZP_20233924.1| farnesyl diphosphate synthase [Escherichia coli KTE120]
gi|433051720|ref|ZP_20238958.1| farnesyl diphosphate synthase [Escherichia coli KTE122]
gi|433061638|ref|ZP_20248604.1| farnesyl diphosphate synthase [Escherichia coli KTE125]
gi|433066629|ref|ZP_20253473.1| farnesyl diphosphate synthase [Escherichia coli KTE128]
gi|433090742|ref|ZP_20277050.1| farnesyl diphosphate synthase [Escherichia coli KTE138]
gi|433157364|ref|ZP_20342240.1| farnesyl diphosphate synthase [Escherichia coli KTE177]
gi|433172291|ref|ZP_20356851.1| farnesyl diphosphate synthase [Escherichia coli KTE232]
gi|433176867|ref|ZP_20361334.1| farnesyl diphosphate synthase [Escherichia coli KTE82]
gi|433201842|ref|ZP_20385654.1| farnesyl diphosphate synthase [Escherichia coli KTE95]
gi|442590099|ref|ZP_21008883.1| Dimethylallyltransferase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442596467|ref|ZP_21014278.1| Dimethylallyltransferase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|450239636|ref|ZP_21899063.1| geranyltranstransferase [Escherichia coli S17]
gi|124931|sp|P22939.1|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Risedronate
gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Risedronate
gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli]
gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli]
gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046]
gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197]
gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110]
gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5]
gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638]
gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A]
gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1]
gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11]
gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39]
gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026]
gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952]
gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase
[Escherichia coli BL21(DE3)]
gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606]
gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)]
gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1]
gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042]
gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412]
gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185]
gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302]
gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617]
gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407]
gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70]
gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1]
gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B]
gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G]
gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68]
gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482]
gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489]
gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007]
gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3]
gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H736]
gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M718]
gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA143]
gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA280]
gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9]
gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88]
gi|338771496|gb|EGP26236.1| Geranyltranstransferase [Escherichia coli PCN033]
gi|339413369|gb|AEJ55041.1| geranyltranstransferase [Escherichia coli UMNF18]
gi|342362493|gb|EGU26611.1| geranyltranstransferase [Escherichia coli XH140A]
gi|344193774|gb|EGV47852.1| geranyltranstransferase [Escherichia coli XH001]
gi|345341440|gb|EGW73845.1| geranyltranstransferase [Escherichia coli STEC_C165-02]
gi|345354043|gb|EGW86270.1| geranyltranstransferase [Escherichia coli STEC_94C]
gi|345365622|gb|EGW97729.1| geranyltranstransferase [Escherichia coli STEC_DG131-3]
gi|345365938|gb|EGW98036.1| geranyltranstransferase [Escherichia coli STEC_EH250]
gi|345381181|gb|EGX13066.1| geranyltranstransferase [Escherichia coli G58-1]
gi|345391215|gb|EGX21009.1| geranyltranstransferase [Escherichia coli STEC_S1191]
gi|349736525|gb|AEQ11231.1| geranyltranstransferase [Escherichia coli O7:K1 str. CE10]
gi|359331181|dbj|BAL37628.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MDS42]
gi|371595502|gb|EHN84351.1| farnesyl diphosphate synthase [Escherichia coli TA124]
gi|378000284|gb|EHV63358.1| farnesyl diphosphate synthase [Escherichia coli DEC6A]
gi|378001327|gb|EHV64386.1| geranyltranstransferase [Escherichia coli DEC6B]
gi|378003836|gb|EHV66876.1| farnesyl diphosphate synthase [Escherichia coli DEC6C]
gi|378014234|gb|EHV77140.1| farnesyl diphosphate synthase [Escherichia coli DEC6D]
gi|378017159|gb|EHV80034.1| geranyltranstransferase [Escherichia coli DEC6E]
gi|378037737|gb|EHW00260.1| geranyltranstransferase [Escherichia coli DEC7B]
gi|378134727|gb|EHW96048.1| geranyltranstransferase [Escherichia coli DEC10E]
gi|378226300|gb|EHX86487.1| geranyltranstransferase [Escherichia coli DEC14B]
gi|378234448|gb|EHX94526.1| geranyltranstransferase [Escherichia coli DEC14C]
gi|378237138|gb|EHX97165.1| geranyltranstransferase [Escherichia coli DEC14D]
gi|383101806|gb|AFG39315.1| Geranylgeranyl pyrophosphate synthase [Escherichia coli P12b]
gi|384377988|gb|EIE35880.1| polyprenyl synthetase [Escherichia coli J53]
gi|384471428|gb|EIE55507.1| polyprenyl synthetase [Escherichia coli AI27]
gi|385155319|gb|EIF17323.1| geranyltranstransferase [Escherichia coli O32:H37 str. P4]
gi|385539908|gb|EIF86735.1| farnesyl diphosphate synthase [Escherichia coli M919]
gi|385712892|gb|EIG49831.1| farnesyl diphosphate synthase [Escherichia coli H730]
gi|386123446|gb|EIG72042.1| farnesyl diphosphate synthase [Escherichia sp. 4_1_40B]
gi|386148855|gb|EIG95290.1| polyprenyl synthetase [Escherichia coli 97.0246]
gi|386157233|gb|EIH13575.1| polyprenyl synthetase [Escherichia coli 97.0259]
gi|386164493|gb|EIH26279.1| polyprenyl synthetase [Escherichia coli 1.2264]
gi|386170671|gb|EIH42724.1| polyprenyl synthetase [Escherichia coli 99.0741]
gi|386200000|gb|EIH98991.1| polyprenyl synthetase [Escherichia coli 96.154]
gi|386206916|gb|EII11422.1| polyprenyl synthetase [Escherichia coli 5.0959]
gi|386209202|gb|EII19689.1| polyprenyl synthetase [Escherichia coli 9.0111]
gi|386225788|gb|EII48113.1| polyprenyl synthetase [Escherichia coli 2.3916]
gi|386236837|gb|EII68809.1| polyprenyl synthetase [Escherichia coli 2.4168]
gi|386242063|gb|EII78976.1| polyprenyl synthetase [Escherichia coli 3.2303]
gi|386252565|gb|EIJ02256.1| polyprenyl synthetase [Escherichia coli B41]
gi|388395263|gb|EIL56487.1| geranyltranstransferase [Escherichia coli KD2]
gi|388398282|gb|EIL59206.1| geranyltranstransferase [Escherichia coli 576-1]
gi|388400845|gb|EIL61537.1| geranyltranstransferase [Escherichia coli 75]
gi|388420476|gb|EIL80168.1| geranyltranstransferase [Escherichia coli CUMT8]
gi|391268278|gb|EIQ27206.1| farnesyl diphosphate synthase [Shigella flexneri K-315]
gi|391288774|gb|EIQ47273.1| farnesyl diphosphate synthase [Shigella sonnei 3226-85]
gi|391289254|gb|EIQ47749.1| farnesyl diphosphate synthase [Shigella sonnei 3233-85]
gi|391297014|gb|EIQ55090.1| geranyltranstransferase [Shigella sonnei 4822-66]
gi|397902990|gb|EJL19297.1| geranyltranstransferase [Shigella sonnei str. Moseley]
gi|404292782|gb|EJZ49573.1| farnesyl diphosphate synthase [Escherichia sp. 1_1_43]
gi|408198892|gb|EKI24103.1| farnesyl diphosphate synthase [Escherichia coli TW15901]
gi|408206208|gb|EKI31020.1| farnesyl diphosphate synthase [Escherichia coli TW00353]
gi|408218912|gb|EKI43094.1| farnesyl diphosphate synthase [Escherichia coli 3006]
gi|408232175|gb|EKI55426.1| farnesyl diphosphate synthase [Escherichia coli N1]
gi|408458751|gb|EKJ82536.1| polyprenyl synthetase [Escherichia coli AD30]
gi|408573139|gb|EKK48998.1| farnesyl diphosphate synthase [Escherichia coli 8.0566]
gi|408573652|gb|EKK49482.1| farnesyl diphosphate synthase [Escherichia coli 8.0569]
gi|430880717|gb|ELC03992.1| farnesyl diphosphate synthase [Escherichia coli KTE2]
gi|430888866|gb|ELC11537.1| farnesyl diphosphate synthase [Escherichia coli KTE10]
gi|430922706|gb|ELC43453.1| farnesyl diphosphate synthase [Escherichia coli KTE21]
gi|430929253|gb|ELC49764.1| farnesyl diphosphate synthase [Escherichia coli KTE26]
gi|430943749|gb|ELC63855.1| farnesyl diphosphate synthase [Escherichia coli KTE44]
gi|430947405|gb|ELC67103.1| farnesyl diphosphate synthase [Escherichia coli KTE181]
gi|430974593|gb|ELC91516.1| farnesyl diphosphate synthase [Escherichia coli KTE193]
gi|430992476|gb|ELD08847.1| farnesyl diphosphate synthase [Escherichia coli KTE204]
gi|431010381|gb|ELD24729.1| farnesyl diphosphate synthase [Escherichia coli KTE208]
gi|431013123|gb|ELD26857.1| farnesyl diphosphate synthase [Escherichia coli KTE213]
gi|431018551|gb|ELD31982.1| farnesyl diphosphate synthase [Escherichia coli KTE212]
gi|431045612|gb|ELD55842.1| farnesyl diphosphate synthase [Escherichia coli KTE228]
gi|431057180|gb|ELD66650.1| farnesyl diphosphate synthase [Escherichia coli KTE233]
gi|431063802|gb|ELD73016.1| farnesyl diphosphate synthase [Escherichia coli KTE234]
gi|431064529|gb|ELD73396.1| farnesyl diphosphate synthase [Escherichia coli KTE235]
gi|431078314|gb|ELD85372.1| farnesyl diphosphate synthase [Escherichia coli KTE236]
gi|431085314|gb|ELD91427.1| farnesyl diphosphate synthase [Escherichia coli KTE237]
gi|431099564|gb|ELE04584.1| farnesyl diphosphate synthase [Escherichia coli KTE51]
gi|431108800|gb|ELE12771.1| farnesyl diphosphate synthase [Escherichia coli KTE56]
gi|431143985|gb|ELE45693.1| farnesyl diphosphate synthase [Escherichia coli KTE66]
gi|431162883|gb|ELE63323.1| farnesyl diphosphate synthase [Escherichia coli KTE76]
gi|431165140|gb|ELE65498.1| farnesyl diphosphate synthase [Escherichia coli KTE77]
gi|431174510|gb|ELE74555.1| farnesyl diphosphate synthase [Escherichia coli KTE80]
gi|431185115|gb|ELE84845.1| farnesyl diphosphate synthase [Escherichia coli KTE83]
gi|431203780|gb|ELF02370.1| farnesyl diphosphate synthase [Escherichia coli KTE111]
gi|431204677|gb|ELF03235.1| farnesyl diphosphate synthase [Escherichia coli KTE116]
gi|431213743|gb|ELF11599.1| farnesyl diphosphate synthase [Escherichia coli KTE119]
gi|431230799|gb|ELF26569.1| farnesyl diphosphate synthase [Escherichia coli KTE161]
gi|431247124|gb|ELF41366.1| farnesyl diphosphate synthase [Escherichia coli KTE171]
gi|431286835|gb|ELF77655.1| farnesyl diphosphate synthase [Escherichia coli KTE42]
gi|431313361|gb|ELG01334.1| farnesyl diphosphate synthase [Escherichia coli KTE48]
gi|431319262|gb|ELG06946.1| farnesyl diphosphate synthase [Escherichia coli KTE50]
gi|431320722|gb|ELG08352.1| farnesyl diphosphate synthase [Escherichia coli KTE54]
gi|431342466|gb|ELG29445.1| farnesyl diphosphate synthase [Escherichia coli KTE78]
gi|431345857|gb|ELG32771.1| farnesyl diphosphate synthase [Escherichia coli KTE79]
gi|431357422|gb|ELG44089.1| farnesyl diphosphate synthase [Escherichia coli KTE101]
gi|431368936|gb|ELG55167.1| farnesyl diphosphate synthase [Escherichia coli KTE115]
gi|431391873|gb|ELG75477.1| farnesyl diphosphate synthase [Escherichia coli KTE140]
gi|431402548|gb|ELG85860.1| farnesyl diphosphate synthase [Escherichia coli KTE144]
gi|431405184|gb|ELG88427.1| farnesyl diphosphate synthase [Escherichia coli KTE147]
gi|431408132|gb|ELG91324.1| farnesyl diphosphate synthase [Escherichia coli KTE146]
gi|431413537|gb|ELG96302.1| farnesyl diphosphate synthase [Escherichia coli KTE154]
gi|431419975|gb|ELH02309.1| farnesyl diphosphate synthase [Escherichia coli KTE158]
gi|431447182|gb|ELH27924.1| farnesyl diphosphate synthase [Escherichia coli KTE190]
gi|431462995|gb|ELH43189.1| farnesyl diphosphate synthase [Escherichia coli KTE196]
gi|431470684|gb|ELH50581.1| farnesyl diphosphate synthase [Escherichia coli KTE197]
gi|431475889|gb|ELH55693.1| farnesyl diphosphate synthase [Escherichia coli KTE203]
gi|431478700|gb|ELH58445.1| farnesyl diphosphate synthase [Escherichia coli KTE202]
gi|431537547|gb|ELI13664.1| farnesyl diphosphate synthase [Escherichia coli KTE105]
gi|431560164|gb|ELI33685.1| farnesyl diphosphate synthase [Escherichia coli KTE112]
gi|431560374|gb|ELI33888.1| farnesyl diphosphate synthase [Escherichia coli KTE117]
gi|431572881|gb|ELI45705.1| farnesyl diphosphate synthase [Escherichia coli KTE120]
gi|431575855|gb|ELI48578.1| farnesyl diphosphate synthase [Escherichia coli KTE122]
gi|431588342|gb|ELI59627.1| farnesyl diphosphate synthase [Escherichia coli KTE125]
gi|431591164|gb|ELI62164.1| farnesyl diphosphate synthase [Escherichia coli KTE128]
gi|431615194|gb|ELI84324.1| farnesyl diphosphate synthase [Escherichia coli KTE138]
gi|431682050|gb|ELJ47819.1| farnesyl diphosphate synthase [Escherichia coli KTE177]
gi|431696236|gb|ELJ61423.1| farnesyl diphosphate synthase [Escherichia coli KTE232]
gi|431710572|gb|ELJ74946.1| farnesyl diphosphate synthase [Escherichia coli KTE82]
gi|431726358|gb|ELJ90168.1| farnesyl diphosphate synthase [Escherichia coli KTE95]
gi|441609757|emb|CCP94796.1| Dimethylallyltransferase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441655128|emb|CCQ00191.1| Dimethylallyltransferase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|449324949|gb|EMD14868.1| geranyltranstransferase [Escherichia coli S17]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
Length = 289
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 40/249 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ TL + + + N +MP+ACA EM+ T +L
Sbjct: 40 GKRIRPTLMLCTYNVYKDNYKDIMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHK 99
Query: 136 --NRALLCYAVEHMATKTKNVSPD-------RLVRAIGEISSAVGTRGVLAGRIMEINSK 186
A+ A + + + N+ + R ++A IS A G G++ G++++I S+
Sbjct: 100 VFGEAMAILAGDGLLNEAMNIMFNYSLNNDIRALKASKIISEASGVEGMIGGQVVDIISE 159
Query: 187 GKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL 246
GK +++ L ++ + + GKLI++ ++ G ++G +EDI+ L ++G+ +GLA+Q+ DDIL
Sbjct: 160 GKKITIDNLKYMHKNKTGKLIKSPIIAGAILGNAPKEDIDILEEFGEKLGLAFQIKDDIL 219
Query: 247 DNMKKKKEAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLY 298
D + K G +++ T+ G+ K+ +L E L L
Sbjct: 220 DVIGDVKVLGKEIHKDKENNKTTFISEFGLESCKKMCIDLTKECLNLLKQI-QGNTRELE 278
Query: 299 HLADFLVSR 307
+ FL+ R
Sbjct: 279 EITKFLMKR 287
>gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627]
gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL I E+++A G G+ G+ ++++++GK V L L+ I R + G LI A+V G L
Sbjct: 137 DRLA-MISELANASGIAGMCGGQALDLDAEGKQVPLEALERIHRHKTGALIRAAVRLGAL 195
Query: 217 IGGGSEED-IEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + + L KY + +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 196 SAGEKGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLG 255
Query: 268 VAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
+ A++ A++L+ +A Q L+ + L LAD+++ R+K
Sbjct: 256 LEQARKKARDLIDDARQSLSQLAEQSLDTSALEALADYIIQRNK 299
>gi|422830622|ref|ZP_16878778.1| geranyltranstransferase [Escherichia coli B093]
gi|371604318|gb|EHN92947.1| geranyltranstransferase [Escherichia coli B093]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLEALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 str. EDL933]
gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024]
gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966]
gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
gi|387505437|ref|YP_006157693.1| geranyltranstransferase [Escherichia coli O55:H7 str. RM12579]
gi|387881017|ref|YP_006311319.1| geranyltranstransferase [Escherichia coli Xuzhou21]
gi|416312974|ref|ZP_11657909.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044]
gi|416316790|ref|ZP_11659922.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212]
gi|416325642|ref|ZP_11666050.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125]
gi|416780489|ref|ZP_11876875.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101]
gi|416791640|ref|ZP_11881773.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89]
gi|416803283|ref|ZP_11886634.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687]
gi|416811854|ref|ZP_11890127.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97]
gi|416822815|ref|ZP_11895142.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905]
gi|416834989|ref|ZP_11901237.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61]
gi|419043618|ref|ZP_13590592.1| geranyltranstransferase [Escherichia coli DEC3A]
gi|419049020|ref|ZP_13595939.1| geranyltranstransferase [Escherichia coli DEC3B]
gi|419055075|ref|ZP_13601933.1| geranyltranstransferase [Escherichia coli DEC3C]
gi|419060668|ref|ZP_13607453.1| geranyltranstransferase [Escherichia coli DEC3D]
gi|419066547|ref|ZP_13613228.1| geranyltranstransferase [Escherichia coli DEC3E]
gi|419073543|ref|ZP_13619116.1| geranyltranstransferase [Escherichia coli DEC3F]
gi|419078733|ref|ZP_13624218.1| geranyltranstransferase [Escherichia coli DEC4A]
gi|419084384|ref|ZP_13629800.1| geranyltranstransferase [Escherichia coli DEC4B]
gi|419090233|ref|ZP_13635553.1| geranyltranstransferase [Escherichia coli DEC4C]
gi|419096302|ref|ZP_13641546.1| geranyltranstransferase [Escherichia coli DEC4D]
gi|419102053|ref|ZP_13647220.1| geranyltranstransferase [Escherichia coli DEC4E]
gi|419107507|ref|ZP_13652617.1| geranyltranstransferase [Escherichia coli DEC4F]
gi|419113274|ref|ZP_13658309.1| geranyltranstransferase [Escherichia coli DEC5A]
gi|419118859|ref|ZP_13663844.1| geranyltranstransferase [Escherichia coli DEC5B]
gi|419124578|ref|ZP_13669482.1| geranyltranstransferase [Escherichia coli DEC5C]
gi|419130080|ref|ZP_13674933.1| geranyltranstransferase [Escherichia coli DEC5D]
gi|419134838|ref|ZP_13679647.1| farnesyl diphosphate synthase [Escherichia coli DEC5E]
gi|420267933|ref|ZP_14770340.1| geranyltranstransferase [Escherichia coli PA22]
gi|420273485|ref|ZP_14775818.1| geranyltranstransferase [Escherichia coli PA40]
gi|420278587|ref|ZP_14780854.1| geranyltranstransferase [Escherichia coli TW06591]
gi|420284909|ref|ZP_14787127.1| geranyltranstransferase [Escherichia coli TW10246]
gi|420290555|ref|ZP_14792720.1| geranyltranstransferase [Escherichia coli TW11039]
gi|420296215|ref|ZP_14798312.1| geranyltranstransferase [Escherichia coli TW09109]
gi|420302377|ref|ZP_14804409.1| geranyltranstransferase [Escherichia coli TW10119]
gi|420307812|ref|ZP_14809786.1| geranyltranstransferase [Escherichia coli EC1738]
gi|420313536|ref|ZP_14815444.1| geranyltranstransferase [Escherichia coli EC1734]
gi|421810641|ref|ZP_16246452.1| geranyltranstransferase [Escherichia coli 8.0416]
gi|421816734|ref|ZP_16252297.1| farnesyl diphosphate synthase [Escherichia coli 10.0821]
gi|421822119|ref|ZP_16257557.1| geranyltranstransferase [Escherichia coli FRIK920]
gi|421828852|ref|ZP_16264182.1| geranyltranstransferase [Escherichia coli PA7]
gi|422835163|ref|ZP_16883220.1| geranyltranstransferase [Escherichia coli E101]
gi|423652915|ref|ZP_17628218.1| geranyltranstransferase [Escherichia coli PA31]
gi|424075281|ref|ZP_17812645.1| geranyltranstransferase [Escherichia coli FDA505]
gi|424081609|ref|ZP_17818485.1| geranyltranstransferase [Escherichia coli FDA517]
gi|424088229|ref|ZP_17824504.1| geranyltranstransferase [Escherichia coli FRIK1996]
gi|424094449|ref|ZP_17830224.1| geranyltranstransferase [Escherichia coli FRIK1985]
gi|424100850|ref|ZP_17836029.1| geranyltranstransferase [Escherichia coli FRIK1990]
gi|424107663|ref|ZP_17842257.1| geranyltranstransferase [Escherichia coli 93-001]
gi|424113654|ref|ZP_17847822.1| geranyltranstransferase [Escherichia coli PA3]
gi|424119715|ref|ZP_17853445.1| geranyltranstransferase [Escherichia coli PA5]
gi|424125975|ref|ZP_17859193.1| geranyltranstransferase [Escherichia coli PA9]
gi|424132058|ref|ZP_17864877.1| geranyltranstransferase [Escherichia coli PA10]
gi|424138604|ref|ZP_17870916.1| geranyltranstransferase [Escherichia coli PA14]
gi|424145043|ref|ZP_17876830.1| geranyltranstransferase [Escherichia coli PA15]
gi|424151190|ref|ZP_17882461.1| geranyltranstransferase [Escherichia coli PA24]
gi|424184927|ref|ZP_17887893.1| geranyltranstransferase [Escherichia coli PA25]
gi|424266432|ref|ZP_17893795.1| geranyltranstransferase [Escherichia coli PA28]
gi|424421782|ref|ZP_17899525.1| geranyltranstransferase [Escherichia coli PA32]
gi|424453598|ref|ZP_17905153.1| geranyltranstransferase [Escherichia coli PA33]
gi|424459896|ref|ZP_17910854.1| geranyltranstransferase [Escherichia coli PA39]
gi|424466364|ref|ZP_17916572.1| geranyltranstransferase [Escherichia coli PA41]
gi|424472925|ref|ZP_17922618.1| geranyltranstransferase [Escherichia coli PA42]
gi|424478874|ref|ZP_17928137.1| geranyltranstransferase [Escherichia coli TW07945]
gi|424484943|ref|ZP_17933827.1| geranyltranstransferase [Escherichia coli TW09098]
gi|424491062|ref|ZP_17939478.1| geranyltranstransferase [Escherichia coli TW09195]
gi|424498154|ref|ZP_17945444.1| geranyltranstransferase [Escherichia coli EC4203]
gi|424504383|ref|ZP_17951179.1| geranyltranstransferase [Escherichia coli EC4196]
gi|424510641|ref|ZP_17956895.1| geranyltranstransferase [Escherichia coli TW14313]
gi|424518210|ref|ZP_17962656.1| geranyltranstransferase [Escherichia coli TW14301]
gi|424524039|ref|ZP_17968080.1| geranyltranstransferase [Escherichia coli EC4421]
gi|424530247|ref|ZP_17973893.1| geranyltranstransferase [Escherichia coli EC4422]
gi|424536221|ref|ZP_17979500.1| geranyltranstransferase [Escherichia coli EC4013]
gi|424542129|ref|ZP_17984966.1| geranyltranstransferase [Escherichia coli EC4402]
gi|424548454|ref|ZP_17990678.1| geranyltranstransferase [Escherichia coli EC4439]
gi|424554717|ref|ZP_17996455.1| geranyltranstransferase [Escherichia coli EC4436]
gi|424561063|ref|ZP_18002364.1| geranyltranstransferase [Escherichia coli EC4437]
gi|424567092|ref|ZP_18008024.1| geranyltranstransferase [Escherichia coli EC4448]
gi|424573280|ref|ZP_18013719.1| geranyltranstransferase [Escherichia coli EC1845]
gi|424579235|ref|ZP_18019184.1| geranyltranstransferase [Escherichia coli EC1863]
gi|425095906|ref|ZP_18498947.1| farnesyl diphosphate synthase [Escherichia coli 3.4870]
gi|425102044|ref|ZP_18504709.1| farnesyl diphosphate synthase [Escherichia coli 5.2239]
gi|425107846|ref|ZP_18510114.1| geranyltranstransferase [Escherichia coli 6.0172]
gi|425123668|ref|ZP_18525262.1| farnesyl diphosphate synthase [Escherichia coli 8.0586]
gi|425129707|ref|ZP_18530823.1| farnesyl diphosphate synthase [Escherichia coli 8.2524]
gi|425136047|ref|ZP_18536786.1| geranyltranstransferase [Escherichia coli 10.0833]
gi|425141948|ref|ZP_18542255.1| farnesyl diphosphate synthase [Escherichia coli 10.0869]
gi|425148266|ref|ZP_18548177.1| farnesyl diphosphate synthase [Escherichia coli 88.0221]
gi|425153884|ref|ZP_18553447.1| geranyltranstransferase [Escherichia coli PA34]
gi|425160333|ref|ZP_18559522.1| geranyltranstransferase [Escherichia coli FDA506]
gi|425165843|ref|ZP_18564667.1| geranyltranstransferase [Escherichia coli FDA507]
gi|425172135|ref|ZP_18570549.1| geranyltranstransferase [Escherichia coli FDA504]
gi|425178015|ref|ZP_18576084.1| geranyltranstransferase [Escherichia coli FRIK1999]
gi|425184164|ref|ZP_18581803.1| geranyltranstransferase [Escherichia coli FRIK1997]
gi|425190915|ref|ZP_18588056.1| geranyltranstransferase [Escherichia coli NE1487]
gi|425197245|ref|ZP_18593910.1| geranyltranstransferase [Escherichia coli NE037]
gi|425203906|ref|ZP_18600050.1| geranyltranstransferase [Escherichia coli FRIK2001]
gi|425209660|ref|ZP_18605411.1| geranyltranstransferase [Escherichia coli PA4]
gi|425215700|ref|ZP_18611033.1| geranyltranstransferase [Escherichia coli PA23]
gi|425222270|ref|ZP_18617144.1| geranyltranstransferase [Escherichia coli PA49]
gi|425228515|ref|ZP_18622926.1| geranyltranstransferase [Escherichia coli PA45]
gi|425234815|ref|ZP_18628789.1| geranyltranstransferase [Escherichia coli TT12B]
gi|425240820|ref|ZP_18634470.1| geranyltranstransferase [Escherichia coli MA6]
gi|425246945|ref|ZP_18640169.1| geranyltranstransferase [Escherichia coli 5905]
gi|425252677|ref|ZP_18645569.1| geranyltranstransferase [Escherichia coli CB7326]
gi|425258987|ref|ZP_18651365.1| geranyltranstransferase [Escherichia coli EC96038]
gi|425265085|ref|ZP_18657023.1| geranyltranstransferase [Escherichia coli 5412]
gi|425292544|ref|ZP_18683143.1| geranyltranstransferase [Escherichia coli PA38]
gi|425309287|ref|ZP_18698767.1| geranyltranstransferase [Escherichia coli EC1735]
gi|425315201|ref|ZP_18704291.1| geranyltranstransferase [Escherichia coli EC1736]
gi|425321254|ref|ZP_18709941.1| geranyltranstransferase [Escherichia coli EC1737]
gi|425327445|ref|ZP_18715681.1| geranyltranstransferase [Escherichia coli EC1846]
gi|425333631|ref|ZP_18721364.1| geranyltranstransferase [Escherichia coli EC1847]
gi|425340052|ref|ZP_18727307.1| geranyltranstransferase [Escherichia coli EC1848]
gi|425345930|ref|ZP_18732746.1| geranyltranstransferase [Escherichia coli EC1849]
gi|425352142|ref|ZP_18738536.1| geranyltranstransferase [Escherichia coli EC1850]
gi|425358132|ref|ZP_18744118.1| geranyltranstransferase [Escherichia coli EC1856]
gi|425364242|ref|ZP_18749805.1| geranyltranstransferase [Escherichia coli EC1862]
gi|425370688|ref|ZP_18755664.1| geranyltranstransferase [Escherichia coli EC1864]
gi|425383482|ref|ZP_18767373.1| geranyltranstransferase [Escherichia coli EC1866]
gi|425390181|ref|ZP_18773651.1| geranyltranstransferase [Escherichia coli EC1868]
gi|425396300|ref|ZP_18779358.1| geranyltranstransferase [Escherichia coli EC1869]
gi|425402285|ref|ZP_18784901.1| geranyltranstransferase [Escherichia coli EC1870]
gi|425408825|ref|ZP_18790992.1| geranyltranstransferase [Escherichia coli NE098]
gi|425415096|ref|ZP_18796746.1| geranyltranstransferase [Escherichia coli FRIK523]
gi|425426251|ref|ZP_18807312.1| geranyltranstransferase [Escherichia coli 0.1304]
gi|428944900|ref|ZP_19017559.1| farnesyl diphosphate synthase [Escherichia coli 88.1467]
gi|428951054|ref|ZP_19023200.1| farnesyl diphosphate synthase [Escherichia coli 88.1042]
gi|428956910|ref|ZP_19028620.1| farnesyl diphosphate synthase [Escherichia coli 89.0511]
gi|428963243|ref|ZP_19034439.1| farnesyl diphosphate synthase [Escherichia coli 90.0091]
gi|428969425|ref|ZP_19040067.1| farnesyl diphosphate synthase [Escherichia coli 90.0039]
gi|428975930|ref|ZP_19046111.1| farnesyl diphosphate synthase [Escherichia coli 90.2281]
gi|428981506|ref|ZP_19051252.1| farnesyl diphosphate synthase [Escherichia coli 93.0055]
gi|428987861|ref|ZP_19057161.1| farnesyl diphosphate synthase [Escherichia coli 93.0056]
gi|428993673|ref|ZP_19062588.1| farnesyl diphosphate synthase [Escherichia coli 94.0618]
gi|428999771|ref|ZP_19068289.1| farnesyl diphosphate synthase [Escherichia coli 95.0183]
gi|429006013|ref|ZP_19073937.1| farnesyl diphosphate synthase [Escherichia coli 95.1288]
gi|429012359|ref|ZP_19079620.1| farnesyl diphosphate synthase [Escherichia coli 95.0943]
gi|429018556|ref|ZP_19085349.1| farnesyl diphosphate synthase [Escherichia coli 96.0428]
gi|429024249|ref|ZP_19090669.1| farnesyl diphosphate synthase [Escherichia coli 96.0427]
gi|429030563|ref|ZP_19096449.1| farnesyl diphosphate synthase [Escherichia coli 96.0939]
gi|429036749|ref|ZP_19102198.1| farnesyl diphosphate synthase [Escherichia coli 96.0932]
gi|429042762|ref|ZP_19107776.1| farnesyl diphosphate synthase [Escherichia coli 96.0107]
gi|429048477|ref|ZP_19113137.1| farnesyl diphosphate synthase [Escherichia coli 97.0003]
gi|429053841|ref|ZP_19118338.1| farnesyl diphosphate synthase [Escherichia coli 97.1742]
gi|429059531|ref|ZP_19123684.1| farnesyl diphosphate synthase [Escherichia coli 97.0007]
gi|429064978|ref|ZP_19128847.1| farnesyl diphosphate synthase [Escherichia coli 99.0672]
gi|429071544|ref|ZP_19134901.1| geranyltranstransferase [Escherichia coli 99.0678]
gi|429076809|ref|ZP_19140029.1| farnesyl diphosphate synthase [Escherichia coli 99.0713]
gi|429824026|ref|ZP_19355543.1| farnesyl diphosphate synthase [Escherichia coli 96.0109]
gi|429830394|ref|ZP_19361261.1| farnesyl diphosphate synthase [Escherichia coli 97.0010]
gi|444922736|ref|ZP_21242459.1| farnesyl diphosphate synthase [Escherichia coli 09BKT078844]
gi|444929058|ref|ZP_21248212.1| farnesyl diphosphate synthase [Escherichia coli 99.0814]
gi|444934408|ref|ZP_21253352.1| farnesyl diphosphate synthase [Escherichia coli 99.0815]
gi|444939988|ref|ZP_21258637.1| farnesyl diphosphate synthase [Escherichia coli 99.0816]
gi|444945646|ref|ZP_21264068.1| farnesyl diphosphate synthase [Escherichia coli 99.0839]
gi|444951134|ref|ZP_21269360.1| farnesyl diphosphate synthase [Escherichia coli 99.0848]
gi|444956588|ref|ZP_21274590.1| farnesyl diphosphate synthase [Escherichia coli 99.1753]
gi|444961927|ref|ZP_21279681.1| farnesyl diphosphate synthase [Escherichia coli 99.1775]
gi|444967624|ref|ZP_21285101.1| farnesyl diphosphate synthase [Escherichia coli 99.1793]
gi|444973126|ref|ZP_21290409.1| farnesyl diphosphate synthase [Escherichia coli 99.1805]
gi|444978665|ref|ZP_21295663.1| farnesyl diphosphate synthase [Escherichia coli ATCC 700728]
gi|444983959|ref|ZP_21300829.1| farnesyl diphosphate synthase [Escherichia coli PA11]
gi|444989203|ref|ZP_21305945.1| farnesyl diphosphate synthase [Escherichia coli PA19]
gi|444994556|ref|ZP_21311153.1| farnesyl diphosphate synthase [Escherichia coli PA13]
gi|445000053|ref|ZP_21316517.1| farnesyl diphosphate synthase [Escherichia coli PA2]
gi|445005508|ref|ZP_21321849.1| farnesyl diphosphate synthase [Escherichia coli PA47]
gi|445010681|ref|ZP_21326875.1| farnesyl diphosphate synthase [Escherichia coli PA48]
gi|445016464|ref|ZP_21332515.1| farnesyl diphosphate synthase [Escherichia coli PA8]
gi|445021911|ref|ZP_21337834.1| farnesyl diphosphate synthase [Escherichia coli 7.1982]
gi|445027152|ref|ZP_21342932.1| farnesyl diphosphate synthase [Escherichia coli 99.1781]
gi|445032647|ref|ZP_21348273.1| farnesyl diphosphate synthase [Escherichia coli 99.1762]
gi|445038341|ref|ZP_21353812.1| farnesyl diphosphate synthase [Escherichia coli PA35]
gi|445043555|ref|ZP_21358895.1| farnesyl diphosphate synthase [Escherichia coli 3.4880]
gi|445049128|ref|ZP_21364299.1| farnesyl diphosphate synthase [Escherichia coli 95.0083]
gi|445054777|ref|ZP_21369730.1| farnesyl diphosphate synthase [Escherichia coli 99.0670]
gi|452969081|ref|ZP_21967308.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4009]
gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
coli O157:H7 str. EDL933]
gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli]
gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli]
gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli]
gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli]
gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli]
gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212]
gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101]
gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89]
gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687]
gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61]
gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044]
gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125]
gi|371612968|gb|EHO01471.1| geranyltranstransferase [Escherichia coli E101]
gi|374357431|gb|AEZ39138.1| geranyltranstransferase [Escherichia coli O55:H7 str. RM12579]
gi|377900691|gb|EHU65023.1| geranyltranstransferase [Escherichia coli DEC3A]
gi|377902516|gb|EHU66820.1| geranyltranstransferase [Escherichia coli DEC3B]
gi|377914341|gb|EHU78464.1| geranyltranstransferase [Escherichia coli DEC3C]
gi|377918733|gb|EHU82780.1| geranyltranstransferase [Escherichia coli DEC3D]
gi|377920821|gb|EHU84836.1| geranyltranstransferase [Escherichia coli DEC3E]
gi|377932409|gb|EHU96263.1| geranyltranstransferase [Escherichia coli DEC3F]
gi|377934458|gb|EHU98289.1| geranyltranstransferase [Escherichia coli DEC4A]
gi|377940589|gb|EHV04338.1| geranyltranstransferase [Escherichia coli DEC4B]
gi|377950424|gb|EHV14051.1| geranyltranstransferase [Escherichia coli DEC4C]
gi|377951202|gb|EHV14821.1| geranyltranstransferase [Escherichia coli DEC4D]
gi|377955428|gb|EHV18984.1| geranyltranstransferase [Escherichia coli DEC4E]
gi|377966065|gb|EHV29478.1| geranyltranstransferase [Escherichia coli DEC5A]
gi|377967378|gb|EHV30784.1| geranyltranstransferase [Escherichia coli DEC4F]
gi|377973490|gb|EHV36830.1| geranyltranstransferase [Escherichia coli DEC5B]
gi|377981454|gb|EHV44713.1| geranyltranstransferase [Escherichia coli DEC5D]
gi|377981816|gb|EHV45074.1| geranyltranstransferase [Escherichia coli DEC5C]
gi|377988561|gb|EHV51739.1| farnesyl diphosphate synthase [Escherichia coli DEC5E]
gi|386794475|gb|AFJ27509.1| geranyltranstransferase [Escherichia coli Xuzhou21]
gi|390650862|gb|EIN29235.1| geranyltranstransferase [Escherichia coli FRIK1996]
gi|390652853|gb|EIN31025.1| geranyltranstransferase [Escherichia coli FDA517]
gi|390653334|gb|EIN31481.1| geranyltranstransferase [Escherichia coli FDA505]
gi|390669777|gb|EIN46370.1| geranyltranstransferase [Escherichia coli 93-001]
gi|390672988|gb|EIN49241.1| geranyltranstransferase [Escherichia coli FRIK1990]
gi|390674117|gb|EIN50324.1| geranyltranstransferase [Escherichia coli FRIK1985]
gi|390688643|gb|EIN63675.1| geranyltranstransferase [Escherichia coli PA3]
gi|390692152|gb|EIN66850.1| geranyltranstransferase [Escherichia coli PA9]
gi|390693098|gb|EIN67738.1| geranyltranstransferase [Escherichia coli PA5]
gi|390708477|gb|EIN81697.1| geranyltranstransferase [Escherichia coli PA10]
gi|390710348|gb|EIN83370.1| geranyltranstransferase [Escherichia coli PA15]
gi|390713029|gb|EIN85972.1| geranyltranstransferase [Escherichia coli PA14]
gi|390720413|gb|EIN93125.1| geranyltranstransferase [Escherichia coli PA22]
gi|390733787|gb|EIO05348.1| geranyltranstransferase [Escherichia coli PA25]
gi|390733965|gb|EIO05524.1| geranyltranstransferase [Escherichia coli PA24]
gi|390737023|gb|EIO08338.1| geranyltranstransferase [Escherichia coli PA28]
gi|390752315|gb|EIO22161.1| geranyltranstransferase [Escherichia coli PA31]
gi|390752780|gb|EIO22586.1| geranyltranstransferase [Escherichia coli PA32]
gi|390755161|gb|EIO24709.1| geranyltranstransferase [Escherichia coli PA33]
gi|390762403|gb|EIO31661.1| geranyltranstransferase [Escherichia coli PA40]
gi|390776224|gb|EIO44175.1| geranyltranstransferase [Escherichia coli PA41]
gi|390778657|gb|EIO46414.1| geranyltranstransferase [Escherichia coli PA42]
gi|390784203|gb|EIO51776.1| geranyltranstransferase [Escherichia coli PA39]
gi|390785561|gb|EIO53103.1| geranyltranstransferase [Escherichia coli TW06591]
gi|390795028|gb|EIO62313.1| geranyltranstransferase [Escherichia coli TW10246]
gi|390801786|gb|EIO68837.1| geranyltranstransferase [Escherichia coli TW11039]
gi|390810306|gb|EIO77067.1| geranyltranstransferase [Escherichia coli TW07945]
gi|390811987|gb|EIO78672.1| geranyltranstransferase [Escherichia coli TW09109]
gi|390819718|gb|EIO86051.1| geranyltranstransferase [Escherichia coli TW10119]
gi|390823102|gb|EIO89174.1| geranyltranstransferase [Escherichia coli TW09098]
gi|390837218|gb|EIP01649.1| geranyltranstransferase [Escherichia coli EC4203]
gi|390840118|gb|EIP04177.1| geranyltranstransferase [Escherichia coli EC4196]
gi|390842443|gb|EIP06291.1| geranyltranstransferase [Escherichia coli TW09195]
gi|390855707|gb|EIP18389.1| geranyltranstransferase [Escherichia coli TW14301]
gi|390860015|gb|EIP22342.1| geranyltranstransferase [Escherichia coli EC4421]
gi|390860483|gb|EIP22797.1| geranyltranstransferase [Escherichia coli TW14313]
gi|390871755|gb|EIP33135.1| geranyltranstransferase [Escherichia coli EC4422]
gi|390876357|gb|EIP37343.1| geranyltranstransferase [Escherichia coli EC4013]
gi|390886190|gb|EIP46328.1| geranyltranstransferase [Escherichia coli EC4402]
gi|390888192|gb|EIP48088.1| geranyltranstransferase [Escherichia coli EC4439]
gi|390895024|gb|EIP54514.1| geranyltranstransferase [Escherichia coli EC4436]
gi|390904038|gb|EIP63054.1| geranyltranstransferase [Escherichia coli EC1738]
gi|390910638|gb|EIP69369.1| geranyltranstransferase [Escherichia coli EC4437]
gi|390912101|gb|EIP70782.1| geranyltranstransferase [Escherichia coli EC1734]
gi|390915087|gb|EIP73605.1| geranyltranstransferase [Escherichia coli EC4448]
gi|390925002|gb|EIP82738.1| geranyltranstransferase [Escherichia coli EC1863]
gi|390926172|gb|EIP83766.1| geranyltranstransferase [Escherichia coli EC1845]
gi|408072530|gb|EKH06851.1| geranyltranstransferase [Escherichia coli PA7]
gi|408076039|gb|EKH10268.1| geranyltranstransferase [Escherichia coli FRIK920]
gi|408086053|gb|EKH19595.1| geranyltranstransferase [Escherichia coli PA34]
gi|408090649|gb|EKH23920.1| geranyltranstransferase [Escherichia coli FDA506]
gi|408095694|gb|EKH28659.1| geranyltranstransferase [Escherichia coli FDA507]
gi|408102836|gb|EKH35225.1| geranyltranstransferase [Escherichia coli FDA504]
gi|408110209|gb|EKH42036.1| geranyltranstransferase [Escherichia coli FRIK1999]
gi|408116863|gb|EKH48130.1| geranyltranstransferase [Escherichia coli FRIK1997]
gi|408122364|gb|EKH53226.1| geranyltranstransferase [Escherichia coli NE1487]
gi|408130342|gb|EKH60490.1| geranyltranstransferase [Escherichia coli NE037]
gi|408132484|gb|EKH62460.1| geranyltranstransferase [Escherichia coli FRIK2001]
gi|408141574|gb|EKH71029.1| geranyltranstransferase [Escherichia coli PA4]
gi|408150505|gb|EKH79087.1| geranyltranstransferase [Escherichia coli PA23]
gi|408153390|gb|EKH81785.1| geranyltranstransferase [Escherichia coli PA49]
gi|408158607|gb|EKH86724.1| geranyltranstransferase [Escherichia coli PA45]
gi|408167163|gb|EKH94690.1| geranyltranstransferase [Escherichia coli TT12B]
gi|408172649|gb|EKH99712.1| geranyltranstransferase [Escherichia coli MA6]
gi|408174722|gb|EKI01686.1| geranyltranstransferase [Escherichia coli 5905]
gi|408187039|gb|EKI13020.1| geranyltranstransferase [Escherichia coli CB7326]
gi|408192223|gb|EKI17800.1| geranyltranstransferase [Escherichia coli EC96038]
gi|408192320|gb|EKI17896.1| geranyltranstransferase [Escherichia coli 5412]
gi|408233156|gb|EKI56291.1| geranyltranstransferase [Escherichia coli PA38]
gi|408239320|gb|EKI62073.1| geranyltranstransferase [Escherichia coli EC1735]
gi|408249200|gb|EKI71152.1| geranyltranstransferase [Escherichia coli EC1736]
gi|408253441|gb|EKI75035.1| geranyltranstransferase [Escherichia coli EC1737]
gi|408259554|gb|EKI80713.1| geranyltranstransferase [Escherichia coli EC1846]
gi|408268438|gb|EKI88794.1| geranyltranstransferase [Escherichia coli EC1847]
gi|408270213|gb|EKI90422.1| geranyltranstransferase [Escherichia coli EC1848]
gi|408278924|gb|EKI98591.1| geranyltranstransferase [Escherichia coli EC1849]
gi|408285359|gb|EKJ04389.1| geranyltranstransferase [Escherichia coli EC1850]
gi|408288127|gb|EKJ06965.1| geranyltranstransferase [Escherichia coli EC1856]
gi|408300598|gb|EKJ18283.1| geranyltranstransferase [Escherichia coli EC1862]
gi|408301151|gb|EKJ18805.1| geranyltranstransferase [Escherichia coli EC1864]
gi|408318222|gb|EKJ34437.1| geranyltranstransferase [Escherichia coli EC1868]
gi|408318819|gb|EKJ35021.1| geranyltranstransferase [Escherichia coli EC1866]
gi|408331637|gb|EKJ46781.1| geranyltranstransferase [Escherichia coli EC1869]
gi|408337218|gb|EKJ51954.1| geranyltranstransferase [Escherichia coli NE098]
gi|408338642|gb|EKJ53288.1| geranyltranstransferase [Escherichia coli EC1870]
gi|408350632|gb|EKJ64480.1| geranyltranstransferase [Escherichia coli FRIK523]
gi|408353275|gb|EKJ66797.1| geranyltranstransferase [Escherichia coli 0.1304]
gi|408559171|gb|EKK35514.1| farnesyl diphosphate synthase [Escherichia coli 5.2239]
gi|408559609|gb|EKK35926.1| farnesyl diphosphate synthase [Escherichia coli 3.4870]
gi|408560331|gb|EKK36595.1| geranyltranstransferase [Escherichia coli 6.0172]
gi|408585460|gb|EKK60327.1| farnesyl diphosphate synthase [Escherichia coli 8.0586]
gi|408590485|gb|EKK64960.1| farnesyl diphosphate synthase [Escherichia coli 8.2524]
gi|408592300|gb|EKK66692.1| geranyltranstransferase [Escherichia coli 10.0833]
gi|408604538|gb|EKK78112.1| farnesyl diphosphate synthase [Escherichia coli 10.0869]
gi|408605943|gb|EKK79423.1| geranyltranstransferase [Escherichia coli 8.0416]
gi|408611135|gb|EKK84497.1| farnesyl diphosphate synthase [Escherichia coli 88.0221]
gi|408617309|gb|EKK90431.1| farnesyl diphosphate synthase [Escherichia coli 10.0821]
gi|427214732|gb|EKV84004.1| farnesyl diphosphate synthase [Escherichia coli 88.1042]
gi|427217262|gb|EKV86331.1| farnesyl diphosphate synthase [Escherichia coli 89.0511]
gi|427217748|gb|EKV86800.1| farnesyl diphosphate synthase [Escherichia coli 88.1467]
gi|427234040|gb|EKW01749.1| farnesyl diphosphate synthase [Escherichia coli 90.2281]
gi|427234326|gb|EKW02025.1| farnesyl diphosphate synthase [Escherichia coli 90.0039]
gi|427236300|gb|EKW03881.1| farnesyl diphosphate synthase [Escherichia coli 90.0091]
gi|427251563|gb|EKW18126.1| farnesyl diphosphate synthase [Escherichia coli 93.0056]
gi|427253054|gb|EKW19497.1| farnesyl diphosphate synthase [Escherichia coli 93.0055]
gi|427254439|gb|EKW20800.1| farnesyl diphosphate synthase [Escherichia coli 94.0618]
gi|427270557|gb|EKW35435.1| farnesyl diphosphate synthase [Escherichia coli 95.0943]
gi|427271044|gb|EKW35893.1| farnesyl diphosphate synthase [Escherichia coli 95.0183]
gi|427276277|gb|EKW40851.1| farnesyl diphosphate synthase [Escherichia coli 95.1288]
gi|427286596|gb|EKW50434.1| farnesyl diphosphate synthase [Escherichia coli 96.0428]
gi|427292252|gb|EKW55606.1| farnesyl diphosphate synthase [Escherichia coli 96.0427]
gi|427293877|gb|EKW57097.1| farnesyl diphosphate synthase [Escherichia coli 96.0939]
gi|427304895|gb|EKW67515.1| farnesyl diphosphate synthase [Escherichia coli 97.0003]
gi|427306535|gb|EKW69054.1| farnesyl diphosphate synthase [Escherichia coli 96.0932]
gi|427311084|gb|EKW73304.1| farnesyl diphosphate synthase [Escherichia coli 96.0107]
gi|427321722|gb|EKW83397.1| farnesyl diphosphate synthase [Escherichia coli 97.1742]
gi|427322702|gb|EKW84330.1| farnesyl diphosphate synthase [Escherichia coli 97.0007]
gi|427334451|gb|EKW95520.1| farnesyl diphosphate synthase [Escherichia coli 99.0713]
gi|427334754|gb|EKW95822.1| geranyltranstransferase [Escherichia coli 99.0678]
gi|427336779|gb|EKW97728.1| farnesyl diphosphate synthase [Escherichia coli 99.0672]
gi|429260186|gb|EKY43779.1| farnesyl diphosphate synthase [Escherichia coli 96.0109]
gi|429261846|gb|EKY45238.1| farnesyl diphosphate synthase [Escherichia coli 97.0010]
gi|444542434|gb|ELV21792.1| farnesyl diphosphate synthase [Escherichia coli 99.0814]
gi|444550912|gb|ELV28930.1| farnesyl diphosphate synthase [Escherichia coli 09BKT078844]
gi|444551779|gb|ELV29655.1| farnesyl diphosphate synthase [Escherichia coli 99.0815]
gi|444565087|gb|ELV41988.1| farnesyl diphosphate synthase [Escherichia coli 99.0839]
gi|444567142|gb|ELV43912.1| farnesyl diphosphate synthase [Escherichia coli 99.0816]
gi|444571460|gb|ELV47942.1| farnesyl diphosphate synthase [Escherichia coli 99.0848]
gi|444582345|gb|ELV58139.1| farnesyl diphosphate synthase [Escherichia coli 99.1753]
gi|444585138|gb|ELV60718.1| farnesyl diphosphate synthase [Escherichia coli 99.1775]
gi|444586105|gb|ELV61626.1| farnesyl diphosphate synthase [Escherichia coli 99.1793]
gi|444599984|gb|ELV74840.1| farnesyl diphosphate synthase [Escherichia coli ATCC 700728]
gi|444600450|gb|ELV75286.1| farnesyl diphosphate synthase [Escherichia coli PA11]
gi|444608368|gb|ELV82901.1| farnesyl diphosphate synthase [Escherichia coli 99.1805]
gi|444614904|gb|ELV89129.1| farnesyl diphosphate synthase [Escherichia coli PA13]
gi|444615571|gb|ELV89775.1| farnesyl diphosphate synthase [Escherichia coli PA19]
gi|444623560|gb|ELV97480.1| farnesyl diphosphate synthase [Escherichia coli PA2]
gi|444632651|gb|ELW06206.1| farnesyl diphosphate synthase [Escherichia coli PA48]
gi|444632872|gb|ELW06421.1| farnesyl diphosphate synthase [Escherichia coli PA47]
gi|444637786|gb|ELW11151.1| farnesyl diphosphate synthase [Escherichia coli PA8]
gi|444647966|gb|ELW20922.1| farnesyl diphosphate synthase [Escherichia coli 7.1982]
gi|444650071|gb|ELW22923.1| farnesyl diphosphate synthase [Escherichia coli 99.1781]
gi|444654161|gb|ELW26855.1| farnesyl diphosphate synthase [Escherichia coli 99.1762]
gi|444663143|gb|ELW35388.1| farnesyl diphosphate synthase [Escherichia coli PA35]
gi|444667415|gb|ELW39453.1| farnesyl diphosphate synthase [Escherichia coli 3.4880]
gi|444672839|gb|ELW44525.1| farnesyl diphosphate synthase [Escherichia coli 95.0083]
gi|444674561|gb|ELW46091.1| farnesyl diphosphate synthase [Escherichia coli 99.0670]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKAQDLIDDARQSLKQLAEQSIDTSALEALADYIIQRNK 299
>gi|417627361|ref|ZP_12277608.1| geranyltranstransferase [Escherichia coli STEC_MHI813]
gi|345377665|gb|EGX09596.1| geranyltranstransferase [Escherichia coli STEC_MHI813]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIEDARQSLKKLAEQSLDTSALEALADYIIQRNK 299
>gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301]
gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
gi|384541969|ref|YP_005726030.1| geranyltranstransferase [Shigella flexneri 2002017]
gi|415859405|ref|ZP_11533680.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
gi|417700436|ref|ZP_12349576.1| geranyltranstransferase [Shigella flexneri K-218]
gi|417721309|ref|ZP_12370157.1| geranyltranstransferase [Shigella flexneri K-304]
gi|417726745|ref|ZP_12375490.1| geranyltranstransferase [Shigella flexneri K-671]
gi|417731808|ref|ZP_12380480.1| geranyltranstransferase [Shigella flexneri 2747-71]
gi|417737231|ref|ZP_12385837.1| geranyltranstransferase [Shigella flexneri 4343-70]
gi|417741846|ref|ZP_12390399.1| geranyltranstransferase [Shigella flexneri 2930-71]
gi|418253590|ref|ZP_12878615.1| geranyltranstransferase [Shigella flexneri 6603-63]
gi|420339970|ref|ZP_14841498.1| farnesyl diphosphate synthase [Shigella flexneri K-404]
gi|420370040|ref|ZP_14870661.1| farnesyl diphosphate synthase [Shigella flexneri 1235-66]
gi|424836910|ref|ZP_18261547.1| geranyltranstransferase [Shigella flexneri 5a str. M90T]
gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 2a str. 301]
gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 2a str. 2457T]
gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017]
gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70]
gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71]
gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671]
gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71]
gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218]
gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304]
gi|383465962|gb|EID60983.1| geranyltranstransferase [Shigella flexneri 5a str. M90T]
gi|391274058|gb|EIQ32873.1| farnesyl diphosphate synthase [Shigella flexneri K-404]
gi|391320649|gb|EIQ77476.1| farnesyl diphosphate synthase [Shigella flexneri 1235-66]
gi|397901464|gb|EJL17810.1| geranyltranstransferase [Shigella flexneri 6603-63]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQALKQLAEQSLDTSALEALADYIIQRNK 299
>gi|385799804|ref|YP_005836208.1| polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + EL+ GN + + A EM+ + +L
Sbjct: 45 GKRIRPILTLLIAELLEGNYQAALKAGSALEMIHSYSLIHDDLPAMDDDKLRRGKKTNHL 104
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
LL YA + +A + PD V+ I + G +G++ G+++++ +
Sbjct: 105 VFGEATAILAGDGLLTYAFQVLADL--ELKPDLKVKIIANTAKFSGYQGMVGGQVLDLEA 162
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ KD++L E+ + + + G LI+ASV+ GV E+ + L Y + +G+ +Q+ DD+
Sbjct: 163 ENKDLTLQEMQKVHQAKTGALIKASVLNGVYCSDFKPEEKKALLTYAEKIGVLFQIVDDL 222
Query: 246 LDNMKKKKEAG-----DDE---ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + + G D E ATYPKL+G+ A++ A++ EA + L F +A L
Sbjct: 223 LDLTGETEAMGKVVGRDQELNKATYPKLLGLKKAQKEAEKYAKEAKEALIIF-GKKAEKL 281
Query: 298 YHLADFLVSRHK 309
L DF++ R +
Sbjct: 282 EALIDFILKRQQ 293
>gi|433197008|ref|ZP_20380937.1| farnesyl diphosphate synthase [Escherichia coli KTE94]
gi|431725777|gb|ELJ89616.1| farnesyl diphosphate synthase [Escherichia coli KTE94]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89]
gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88]
gi|222155211|ref|YP_002555350.1| Geranyltranstransferase [Escherichia coli LF82]
gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
gi|386598136|ref|YP_006099642.1| geranyltranstransferase [Escherichia coli IHE3034]
gi|386605626|ref|YP_006111926.1| geranyltranstransferase [Escherichia coli UM146]
gi|387615737|ref|YP_006118759.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C]
gi|417082886|ref|ZP_11951055.1| geranyltranstransferase [Escherichia coli cloneA_i1]
gi|419945575|ref|ZP_14462013.1| geranyltranstransferase [Escherichia coli HM605]
gi|422356302|ref|ZP_16436991.1| polyprenyl synthetase [Escherichia coli MS 110-3]
gi|422748512|ref|ZP_16802425.1| polyprenyl synthetase [Escherichia coli H252]
gi|422753074|ref|ZP_16806901.1| polyprenyl synthetase [Escherichia coli H263]
gi|422838943|ref|ZP_16886915.1| geranyltranstransferase [Escherichia coli H397]
gi|432356765|ref|ZP_19600012.1| farnesyl diphosphate synthase [Escherichia coli KTE4]
gi|432361172|ref|ZP_19604369.1| farnesyl diphosphate synthase [Escherichia coli KTE5]
gi|432572416|ref|ZP_19808907.1| farnesyl diphosphate synthase [Escherichia coli KTE55]
gi|432586720|ref|ZP_19823092.1| farnesyl diphosphate synthase [Escherichia coli KTE58]
gi|432596306|ref|ZP_19832595.1| farnesyl diphosphate synthase [Escherichia coli KTE62]
gi|432753218|ref|ZP_19987786.1| farnesyl diphosphate synthase [Escherichia coli KTE22]
gi|432777273|ref|ZP_20011527.1| farnesyl diphosphate synthase [Escherichia coli KTE59]
gi|432786069|ref|ZP_20020237.1| farnesyl diphosphate synthase [Escherichia coli KTE65]
gi|432819740|ref|ZP_20053454.1| farnesyl diphosphate synthase [Escherichia coli KTE118]
gi|432825869|ref|ZP_20059526.1| farnesyl diphosphate synthase [Escherichia coli KTE123]
gi|433003947|ref|ZP_20192385.1| farnesyl diphosphate synthase [Escherichia coli KTE227]
gi|433011155|ref|ZP_20199560.1| farnesyl diphosphate synthase [Escherichia coli KTE229]
gi|433152565|ref|ZP_20337535.1| farnesyl diphosphate synthase [Escherichia coli KTE176]
gi|433162235|ref|ZP_20347000.1| farnesyl diphosphate synthase [Escherichia coli KTE179]
gi|433167210|ref|ZP_20351886.1| farnesyl diphosphate synthase [Escherichia coli KTE180]
gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89]
gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88]
gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82]
gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034]
gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146]
gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C]
gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3]
gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252]
gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263]
gi|355353070|gb|EHG02242.1| geranyltranstransferase [Escherichia coli cloneA_i1]
gi|371611414|gb|EHN99936.1| geranyltranstransferase [Escherichia coli H397]
gi|388415178|gb|EIL75111.1| geranyltranstransferase [Escherichia coli HM605]
gi|430879575|gb|ELC02906.1| farnesyl diphosphate synthase [Escherichia coli KTE4]
gi|430891407|gb|ELC13943.1| farnesyl diphosphate synthase [Escherichia coli KTE5]
gi|431110754|gb|ELE14671.1| farnesyl diphosphate synthase [Escherichia coli KTE55]
gi|431124000|gb|ELE26654.1| farnesyl diphosphate synthase [Escherichia coli KTE58]
gi|431133973|gb|ELE35939.1| farnesyl diphosphate synthase [Escherichia coli KTE62]
gi|431305599|gb|ELF93920.1| farnesyl diphosphate synthase [Escherichia coli KTE22]
gi|431330847|gb|ELG18111.1| farnesyl diphosphate synthase [Escherichia coli KTE59]
gi|431342000|gb|ELG28996.1| farnesyl diphosphate synthase [Escherichia coli KTE65]
gi|431370742|gb|ELG56535.1| farnesyl diphosphate synthase [Escherichia coli KTE118]
gi|431375253|gb|ELG60597.1| farnesyl diphosphate synthase [Escherichia coli KTE123]
gi|431517268|gb|ELH94790.1| farnesyl diphosphate synthase [Escherichia coli KTE227]
gi|431519367|gb|ELH96819.1| farnesyl diphosphate synthase [Escherichia coli KTE229]
gi|431678621|gb|ELJ44617.1| farnesyl diphosphate synthase [Escherichia coli KTE176]
gi|431692273|gb|ELJ57711.1| farnesyl diphosphate synthase [Escherichia coli KTE179]
gi|431694165|gb|ELJ59550.1| farnesyl diphosphate synthase [Escherichia coli KTE180]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 61/300 (20%)
Query: 61 IQIDEYMTLKAKKIN---KALFEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM ++ K IN + +F+ + + L +L+YP + G+R+ L + +CE
Sbjct: 1 MNLKEYMNIRLKDINNNIENIFDKSDIELENSFIEMLKYPL--DAGGKRLRPVLTLLACE 58
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
L G+ + A + E++ T +L L
Sbjct: 59 LFEGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L +A + ++ +V L + + E+S A G G++ G+ +++ + K+++ L +
Sbjct: 119 LTHAFQLLSKA--DVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKVLH 176
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEA 255
+ +I +V G I ++ DIE + KYG+ +GLA+Q+ DDIL DN K
Sbjct: 177 AKKTAAMIRGAVRLGA-ISSENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 235
Query: 256 GDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP----LYHLADFLVSR 307
G DE TY K G+ GAK+ AK++ +A + Y +P + + L LA++++ R
Sbjct: 236 GKDEKEGKLTYVKQFGLEGAKKEAKKVTEKA---IEYLNPYKESEAKNILIELANYIIER 292
>gi|422782790|ref|ZP_16835575.1| polyprenyl synthetase [Escherichia coli TW10509]
gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509]
Length = 299
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L+ L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLNALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKAQDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|432678010|ref|ZP_19913437.1| farnesyl diphosphate synthase [Escherichia coli KTE142]
gi|431207646|gb|ELF05900.1| farnesyl diphosphate synthase [Escherichia coli KTE142]
Length = 299
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+Q+ DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQIQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|340752560|ref|ZP_08689359.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
Length = 298
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 101/185 (54%), Gaps = 10/185 (5%)
Query: 133 LALNRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVS 191
+ + ALL YA ++ K N+ S +++ + I + S+ G G++ G++++I S+ K ++
Sbjct: 112 ILIGDALLTYAFYMLSEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKIN 171
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD---- 247
L L +I + + GKLI+ + +I SE+ L +Y + +GLA+QV DDILD
Sbjct: 172 LETLKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGT 231
Query: 248 --NMKKKKEAGDD--EATYPKLMGVAGAKRYAKELVAEANQEL-AYFDPTRAAPLYHLAD 302
++ K + DD +ATYP ++G+ +K+ E V A + + F + L LAD
Sbjct: 232 FEDLGKPVGSDDDLHKATYPSILGMEESKKILNETVERAKKIIHNMFGEEKGKILISLAD 291
Query: 303 FLVSR 307
F+ R
Sbjct: 292 FIRER 296
>gi|363890208|ref|ZP_09317549.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
gi|361965889|gb|EHL18851.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
Length = 295
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL +A E + KN V+A EIS+ G G++ G++ +I ++ KD+S+ L++
Sbjct: 116 ALLNFAYELLFKFIKNNFQINSVKACEEISNCAGIYGMIGGQVSDIINENKDISVDNLEY 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD 257
I + KLI AS+V + E D+E LRKY +G+A+Q+ DDILD + +K G
Sbjct: 176 IHENKTAKLIIASMVSAGYLANADETDMEHLRKYAYNLGMAFQISDDILDIIGNEKLLGK 235
Query: 258 ------DEA--TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
DE TYPK G+ +K V A E++ + LA ++ +R
Sbjct: 236 SVGKDVDEGKNTYPKYFGIEKSKEKLNVYVNSAIDEISEIKDKDMSFFIELATYIGNR 293
>gi|407716696|ref|YP_006837976.1| polyprenyl synthetase [Cycloclasticus sp. P1]
gi|407257032|gb|AFT67473.1| Polyprenyl synthetase [Cycloclasticus sp. P1]
Length = 294
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL A +A + S ++ + I +S A G+RG++ G+ +++ ++GK +S++E++
Sbjct: 117 ALLTLAFNVLAKA--DCSNEQKITCIQLLSQAAGSRGMVGGQAIDLANEGKSISIAEIEN 174
Query: 198 IKRLRCGKLIEASV-VCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK---- 252
+ + G LI + + + L ++ L+ Y +C+GLA+QV DDILD
Sbjct: 175 MHLHKTGALICSCITLVASLKFQTTDSQYRHLKHYAECIGLAFQVQDDILDETSSTSTLG 234
Query: 253 KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K G D ++TYP ++G+ +K K+L EA Q L+ FD RA L +A F +SR
Sbjct: 235 KTQGKDRQAEKSTYPSILGLRASKHLTKDLYDEAIQSLSNFDH-RANYLRDIAQFTISR 292
>gi|418965160|ref|ZP_13516944.1| polyprenyl synthetase [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343545|gb|EID21728.1| polyprenyl synthetase [Streptococcus constellatus subsp.
constellatus SK53]
Length = 300
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 160 VRA--IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
+RA I E+S A GT G++ G+++++ +G+ VSL EL I + GKL+ + LI
Sbjct: 130 IRANLIAELSQAAGTFGMVGGQVLDMQGEGRGVSLEELQVIHANKTGKLLTYPFIAAGLI 189
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK--------KKEAGDDEATYPKLMGVA 269
+E EKLRK G+ +GLA+QV DDILD +K+ +ATYP L+G+
Sbjct: 190 AELAEPQQEKLRKTGQLLGLAFQVRDDILDETASFEDLGKTPQKDVAAGKATYPVLLGLD 249
Query: 270 GAKRYAKELVAEANQELA 287
GAK + +E ++ A LA
Sbjct: 250 GAKHFFEEQLSAAEILLA 267
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +S + V P A A EML T +L
Sbjct: 48 GKRLRPVLIYSSYGIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHK 107
Query: 136 ----------NRALLCYAVEHMATK--TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEI 183
ALL A E M K K++ + ++ A +++ + G +G++ G+ +I
Sbjct: 108 MFGEATAILAGDALLTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADI 167
Query: 184 NSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWD 243
++ K++ + LDFI + + LI G ++G E+D + L ++G+ +GLA+Q+ D
Sbjct: 168 INENKEIDKNTLDFIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVD 227
Query: 244 DILDNMKKKKE----AGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD +E AG D +ATYP++ G+ +K A++L+ A L + A
Sbjct: 228 DILDITSTTEELGKNAGSDLKNKKATYPEIYGLEKSKSIAEDLINSAINILKPYGKA-AT 286
Query: 296 PLYHLADFLVSRH 308
PL +A++++ R+
Sbjct: 287 PLIEIANYILKRN 299
>gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586]
gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586]
Length = 303
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 28/216 (12%)
Query: 109 SCELVGGNESSVMPLACAAEMLVTLALNRALLCYA-VEHMATKTKNVSPDRLVRAIGEIS 167
+C + G + +++ A + L TLA + +L A + H++ + DRL I E++
Sbjct: 101 TCHVRFGEDKAIL----AGDALQTLAFS--ILADAPMPHVSDR------DRLA-MISELA 147
Query: 168 SAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIE 226
SA G G+ G+ +++ ++G V L L+ I R + G LI ASV G L G +
Sbjct: 148 SASGVAGMCGGQALDLAAEGHQVDLQTLERIHRHKTGALIRASVRLGALAAGERGRLALP 207
Query: 227 KLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMGVAGAKRYAKEL 278
L +Y VGLA+QV DDILD + K++ D + +TYP L+G+ AK+ A+EL
Sbjct: 208 YLDRYANAVGLAFQVQDDILDVIGDSATTGKRQGADQQLGKSTYPALLGLEQAKQKAREL 267
Query: 279 VAEANQELAYFD-----PTRAAPLYHLADFLVSRHK 309
E+ L + P APL LA+++V R K
Sbjct: 268 CKESLSALHELEDTLDRPAAIAPLRALANYVVERDK 303
>gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 303
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL I E++ A G G+ G+ ++ ++G V L+ L+ I R + G LI A+V G L
Sbjct: 138 DRLAM-ISELAHASGVAGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGAL 196
Query: 217 IGGGS-EEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + + L +Y +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 197 AAGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQGADQQLGKSTYPSLLG 256
Query: 268 VAGAKRYAKELVAEANQELAYFD--------PTRAAPLYHLADFLVSRHK 309
+ A++ A+EL E+ LA D P APL LA+F+V R K
Sbjct: 257 LDNARKKAQELYQES---LASLDDLVASSPIPLNIAPLQALANFIVERDK 303
>gi|448745891|ref|ZP_21727561.1| Polyprenyl synthetase-related protein [Halomonas titanicae BH1]
gi|445566619|gb|ELY22725.1| Polyprenyl synthetase-related protein [Halomonas titanicae BH1]
Length = 297
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 14/179 (7%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E +A+ N P RL + ++SA G G++AG+ +++++ G + L
Sbjct: 122 ALQALAFEVLAS---NAHP-RLSHLVHTLASASGRDGMVAGQALDLDAVGDHPDVDALAH 177
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWDDILD----NMKKK 252
+ + G LI A+V G L+ ++ ++ L +Y + +GLA+Q+ DDILD +
Sbjct: 178 MHAHKTGALIVAAVRLGGLVAVDDDDPRLDALTRYARAIGLAFQIHDDILDVTGDTVTLG 237
Query: 253 KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K +G D A TYP L+G+AGA+R A L+ EA LA RAAPL LA +++ R
Sbjct: 238 KTSGADAARAKPTYPSLLGLAGAQRKAHSLIDEAIAALAPLG-ERAAPLADLAHYMIER 295
>gi|429735211|ref|ZP_19269180.1| putative geranyltranstransferase [Selenomonas sp. oral taxon 138
str. F0429]
gi|429159323|gb|EKY01838.1| putative geranyltranstransferase [Selenomonas sp. oral taxon 138
str. F0429]
Length = 291
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 125 CAAEMLVTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + L+TLA + L + KNV + L+R + EIS A G G++ G+++++
Sbjct: 110 LAGDALLTLAFSVIL----------RQKNVPAEALLRVVDEISRAAGAEGMVGGQVLDLR 159
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDD 244
++G +++ EL + + G L A++ G ++ G +E+ + L Y GLA+Q+ DD
Sbjct: 160 AEGVRITMDELRRMHMGKTGALFHAALRSGAILAGATEKQLAALTAYADHFGLAFQITDD 219
Query: 245 ILDNMKKKKE----AGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
ILD + ++ G DE +TY L +A A+ A+ V EA LA F A
Sbjct: 220 ILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLAEAQELARRTVEEATDALAVFGA-EADF 278
Query: 297 LYHLADFLVSRHK 309
L L +LV+R +
Sbjct: 279 LRELVAYLVNRKQ 291
>gi|384266044|ref|YP_005421751.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899064|ref|YP_006329360.1| geranyltranstransferase [Bacillus amyloliquefaciens Y2]
gi|380499397|emb|CCG50435.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173174|gb|AFJ62635.1| geranyltranstransferase [Bacillus amyloliquefaciens Y2]
Length = 296
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGN 116
++D ++ + + I + L E A+P L+ L + E G+R+ + +A G +
Sbjct: 4 KLDAFLASRKQLIEQQLSLYTERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKD 63
Query: 117 ESSVMPLACAAEMLVTLAL-------------------NRALLCYAVEHMATK------- 150
E +P+ CA EM+ T +L N + A +A
Sbjct: 64 EKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESF 123
Query: 151 -------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
++ VS ++ +R + E+ SA GT G++ G+ ++ ++ K ++L EL+ I +
Sbjct: 124 KLITSYVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKT 183
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG------- 256
KL+ SV G ++ E+++EKLR + +G+ +Q+ DDILD ++ G
Sbjct: 184 AKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEERIGKPVGSDT 243
Query: 257 -DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++++TYP L+ + GAK ++EA Q + + L+ L D + +R
Sbjct: 244 SNEKSTYPSLLTLEGAKEKLAYHISEAKQIITGLSLQKEL-LHDLCDLIAAR 294
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|384205043|ref|YP_005590782.1| geranyltranstransferase [Bordetella pertussis CS]
gi|410420906|ref|YP_006901355.1| geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|427824861|ref|ZP_18991923.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
gi|408448201|emb|CCJ59882.1| probable geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|410590126|emb|CCN05205.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++P +V+A ++ A G++G+ G+ ++++S G+ ++ EL + ++ G ++ SV
Sbjct: 141 IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTL 200
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKL 265
G ++ G S + L Y + +GLA+QV DDILD K+A D++ TY L
Sbjct: 201 GGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSL 260
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
+G+ A+ A+EL A+Q LA + A L LADF+V R +
Sbjct: 261 LGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLRDR 303
>gi|395446915|ref|YP_006387168.1| IspA [Pseudomonas putida ND6]
gi|388560912|gb|AFK70053.1| IspA [Pseudomonas putida ND6]
Length = 295
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 10/152 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-ED 224
++ A G G++ G+ +++ S G+ + L+F+ R + G LIEASV G L +E
Sbjct: 144 LAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEPAQ 203
Query: 225 IEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAK 276
++ L+ Y + +GLA+QV DDILD + K++ A D+ TYP L+G+ AK YA
Sbjct: 204 LDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAI 263
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
EL +A L F T A PL LA ++V R
Sbjct: 264 ELRDQALAALQGFGET-AEPLRALARYIVERR 294
>gi|31747831|gb|AAO38414.1| Lfe206p1 [Leptospirillum ferrooxidans]
Length = 150
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 87/145 (60%), Gaps = 9/145 (6%)
Query: 171 GTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRK 230
G G++ G+++++ S+G+ +SL +L+F+ R + G LI +SV G L+G G E ++ L +
Sbjct: 5 GLSGMVGGQMLDMESEGRKISLDDLEFLHRHKTGALILSSVRIGALLGQGGESEMRSLDQ 64
Query: 231 YGKCVGLAYQVWDDILD------NMKKKKEAGDD--EATYPKLMGVAGAKRYAKELVAEA 282
YG+ VG+A+Q+ DD+LD + K + D + TYP L+G+ GAK+ AKE + A
Sbjct: 65 YGEAVGVAFQIADDLLDVEGDTATLGKAAQKDTDHLKNTYPGLLGIEGAKKMAKEKLEAA 124
Query: 283 NQELAYFDPTRAAPLYHLADFLVSR 307
++ +A L +A +++ R
Sbjct: 125 LDAVSGL-GEKANHLRGIARYIIER 148
>gi|443468774|ref|ZP_21058981.1| Octaprenyl-PP synthase [Pseudomonas pseudoalcaligenes KF707]
gi|442897993|gb|ELS24810.1| Octaprenyl-PP synthase [Pseudomonas pseudoalcaligenes KF707]
Length = 295
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 46/276 (16%)
Query: 77 ALFEGAAVPLILQYPTLPN---HEGERVHGTLCIASCELVGGNESSVMPLACAAEML--- 130
ALFE PL Y + + G+RV L A+CE +GG+ + ACA E++
Sbjct: 19 ALFEPPLAPLERLYQAMRYSVVNGGKRVRPLLVYAACEALGGDPARADGAACAVELIHAY 78
Query: 131 ---------------------VTLALNRA--------LLCYAVEHMATKTKN-VSPDRLV 160
+A + A L A E +A +N + +
Sbjct: 79 SLVHDDLPAMDDDDLRRGQPTTHIAFDEACAILAGDGLQALAFEVLADAERNPQDAETRL 138
Query: 161 RAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG- 219
+ + A G G++ G+ +++ S G + + L+ + R + G LIEASV G L G
Sbjct: 139 AMVASLGHAAGPAGMVGGQAIDLGSVGLKLDQAALETMHRHKTGALIEASVRLGALASGQ 198
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMGVAGA 271
+ + LR Y + VGLA+QV DDILD + K+ D+ TYP L+G+ A
Sbjct: 199 ATPAALAALRIYARAVGLAFQVQDDILDVESDTATLGKTQGKDQAHDKPTYPALLGMDRA 258
Query: 272 KRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K YA EL +A +A + A PL LA ++V R
Sbjct: 259 KAYALELRDQALAAVAGLGDS-AEPLRALARYIVER 293
>gi|422317030|ref|ZP_16398399.1| hypothetical protein FPOG_01729 [Fusobacterium periodonticum D10]
gi|404590301|gb|EKA92748.1| hypothetical protein FPOG_01729 [Fusobacterium periodonticum D10]
Length = 298
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 101/185 (54%), Gaps = 10/185 (5%)
Query: 133 LALNRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVS 191
+ + ALL YA ++ K N+ S +++ + I + S+ G G++ G++++I S+ K ++
Sbjct: 112 ILIGDALLTYAFYMLSEKNLNILSFEQITKIISKTSAYSGINGMIGGQMIDIESENKKIN 171
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD---- 247
L L +I + + GKLI+ + +I SE+ L +Y + +GLA+QV DDILD
Sbjct: 172 LETLKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGT 231
Query: 248 --NMKKKKEAGDD--EATYPKLMGVAGAKRYAKELVAEANQEL-AYFDPTRAAPLYHLAD 302
++ K + DD +ATYP ++G+ +K+ E V A + + F + L LAD
Sbjct: 232 FEDLGKPIGSDDDLHKATYPSILGMEESKKILNETVERAKKIIHNMFGEEKGKILISLAD 291
Query: 303 FLVSR 307
F+ R
Sbjct: 292 FIRER 296
>gi|408414645|ref|YP_006625352.1| geranyltranstransferase [Bordetella pertussis 18323]
gi|401776815|emb|CCJ62054.1| probable geranyltranstransferase [Bordetella pertussis 18323]
Length = 303
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++P +V+A ++ A G++G+ G+ ++++S G+ ++ EL + ++ G ++ SV
Sbjct: 141 IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTL 200
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKL 265
G ++ G S + L Y + +GLA+QV DDILD K+A D++ TY L
Sbjct: 201 GGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSL 260
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
+G+ A+ A+EL A+Q LA + A L LADF+V R +
Sbjct: 261 LGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLRDR 303
>gi|423069995|ref|ZP_17058771.1| hypothetical protein HMPREF9177_00088 [Streptococcus intermedius
F0413]
gi|355366316|gb|EHG14034.1| hypothetical protein HMPREF9177_00088 [Streptococcus intermedius
F0413]
Length = 300
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 160 VRA--IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
+RA I E+S A GT G++ G+++++ +G+ VSL EL I + GKL+ + LI
Sbjct: 130 IRANLIAELSQAAGTFGMVGGQVLDMQGEGRGVSLEELQVIHANKTGKLLTYPFIAAGLI 189
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK--------KKEAGDDEATYPKLMGVA 269
+E EKLRK G+ +GLA+QV DDILD +K+ +ATYP ++G+
Sbjct: 190 AELAEPQQEKLRKTGQLLGLAFQVRDDILDETASFEDLGKTPQKDVAAGKATYPAILGLD 249
Query: 270 GAKRYAKELVAEANQELA 287
GAK + +E ++ A LA
Sbjct: 250 GAKHFFEEQLSAAEILLA 267
>gi|404475626|ref|YP_006707057.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
gi|404437115|gb|AFR70309.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
Length = 295
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 54/297 (18%)
Query: 61 IQIDEYMTLKAKKINKAL---FEGAAVPL------ILQYPTLPNHEGERVHGTLCIASCE 111
+ + EYM + K I+ + F+ + L +L+YP + G+R+ L +CE
Sbjct: 1 MNLKEYMNTRLKDIDSEINNIFKTINISLENNFLDMLKYPL--DAGGKRLRPILTCLACE 58
Query: 112 LVGGNESSVMPLACAAEMLVTLAL--------------------------------NRAL 139
L G+ + A + E++ T +L L
Sbjct: 59 LFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L ++ E ++ NV+ L + + EIS A G G++ G+ +++ + +D+ L +
Sbjct: 119 LTHSFEILSNA--NVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILH 176
Query: 200 RLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDIL----DNMKKKKEA 255
+ G +I +V G + ++E + KYG+ +GLA+Q+ DDIL DN K
Sbjct: 177 SKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 236
Query: 256 GDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP-LYHLADFLVSR 307
G DE TY K G+ GAK A E EA L +D A L LA+++V R
Sbjct: 237 GKDEKEGKLTYVKQFGLEGAKEKAMETSKEAIDYLNVYDDNEAKNILIELANYIVER 293
>gi|417826413|ref|ZP_12472992.1| geranyltranstransferase [Shigella flexneri J1713]
gi|335577177|gb|EGM63405.1| geranyltranstransferase [Shigella flexneri J1713]
Length = 299
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G L+ A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALVRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|355672445|ref|ZP_09058375.1| hypothetical protein HMPREF9469_01412 [Clostridium citroniae
WAL-17108]
gi|354815146|gb|EHE99742.1| hypothetical protein HMPREF9469_01412 [Clostridium citroniae
WAL-17108]
Length = 303
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 138 ALLCYAVEHMATKTK-NVSPDRLVR---AIGEISSAVGTRGVLAGRIMEINSKGKDVSLS 193
AL+ YA E + + +V PD L R AIG ++ G G++ G+ +++ G +
Sbjct: 121 ALMMYAFETASCAFETSVDPDELSRIGKAIGILARKTGVYGMIGGQTVDVELAGGPIPAD 180
Query: 194 ELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK 253
+LDFI L+ G LIEAS++ G ++GG ++ED + + +G+A+Q+ DDILD ++
Sbjct: 181 KLDFIYHLKTGALIEASMLIGAVLGGAADEDCKIVESLASKIGMAFQIQDDILDVTGSEE 240
Query: 254 EAG--------DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLV 305
G + + TY L G+ AK+ +++ AEA +EL P L L L+
Sbjct: 241 IIGKPVNSDEKNKKTTYVTLEGLEKAKQDVEKISAEAIEELNKL-PGNNDFLEQLIHLLI 299
Query: 306 SRHK 309
R K
Sbjct: 300 HRQK 303
>gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Reinekea blandensis MED297]
gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Reinekea sp. MED297]
Length = 293
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 92/163 (56%), Gaps = 9/163 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
+SP ++ + ++ + G RG++ G+++++ S+ K ++L+EL + RL+ G LI AS+
Sbjct: 129 LSPRQIRDMVRLLAQSAGARGMVGGQMIDLASEQKTLTLNELSDLHRLKTGALISASLQL 188
Query: 214 GVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDD----EATYPK 264
G L + E + +L +YG +GLA+Q+ DDILD K K G D ++TY K
Sbjct: 189 GALCHDSVDVEILARLARYGDAIGLAFQIADDILDVTGTTEKLGKPQGSDLAAEKSTYVK 248
Query: 265 LMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
L+GV GA+ A + A EL + L+ LAD+++ R
Sbjct: 249 LLGVDGARSEALRQIDCAKNELTALKLGHDSMLWQLADYIIER 291
>gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1]
gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
Length = 295
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 14/172 (8%)
Query: 146 HMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGK 205
H++ + N+ RL + ++ A G G++ G+ +++ S G + L+F+ R + G
Sbjct: 128 HLSPQADNI---RLAM-VQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHRHKTGA 183
Query: 206 LIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA--G 256
LIEASV G L +E+ ++ L+ Y + +GLA+QV DDILD + K++ A
Sbjct: 184 LIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIA 243
Query: 257 DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
D+ TYP L+G+ AK YA EL +A L F T A PL LA ++V R
Sbjct: 244 RDKPTYPALLGLEAAKAYAIELRDQALIALQGFGET-AEPLRALARYIVERR 294
>gi|387929669|ref|ZP_10132346.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
gi|387586487|gb|EIJ78811.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
Length = 297
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 138 ALLCYAVEHMA-TKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELD 196
ALL Y+ + ++ T + + D + I E+S A G G++ G+ +I +GK + LS+L+
Sbjct: 118 ALLTYSFQMISETPEEYAAADTKLNLIRELSKAAGAEGMVGGQAADIEGEGKQLDLSQLE 177
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKK--- 253
+I + GKL+ SV+ G ++ G ++E ++ L ++ +GLA+Q+ DDILD +++
Sbjct: 178 YIHHHKTGKLLAYSVLAGAMLAGANDEQMKDLSQFAFHLGLAFQIRDDILDLEGQEELIG 237
Query: 254 -----EAGDDEATYPKLMGVAGAKRYAKELVAEA 282
+A + ++TYP L+ + GAK + + +A
Sbjct: 238 KPVGSDANNQKSTYPSLLSMEGAKEALTDHIGKA 271
>gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
Length = 299
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKAQDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|374672903|dbj|BAL50794.1| geranyltranstransferase [Lactococcus lactis subsp. lactis IO-1]
Length = 293
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 95/158 (60%), Gaps = 8/158 (5%)
Query: 151 TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEAS 210
T ++S + +V E++ A G+ G++AG+I+++ +GK+++L+E++ I RL+ G+L+
Sbjct: 129 TADLSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFP 188
Query: 211 VVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATY 262
V ++ S +++EKLR+ G+ +GL++Q+ DDILD E G ++++TY
Sbjct: 189 FVAAGIVAQKSTDEVEKLRQVGQILGLSFQIRDDILDVTATFAELGKTPGKDILEEKSTY 248
Query: 263 PKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHL 300
+G+ GAK+ E ++E + L T ++ ++ +
Sbjct: 249 VAHLGLEGAKKSLTENLSEVKKLLTDLSVTDSSEIFKI 286
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++P +V+A ++ A G++G+ G+ ++++S G+ ++ EL + ++ G ++ SV
Sbjct: 141 IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTL 200
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKL 265
G ++ G S + L Y + +GLA+QV DDILD K+A D++ TY L
Sbjct: 201 GGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSL 260
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
+G+ A+ A+EL A+Q LA + A L LADF+V R +
Sbjct: 261 LGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLRDR 303
>gi|343525247|ref|ZP_08762202.1| polyprenyl synthetase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|343395517|gb|EGV08055.1| polyprenyl synthetase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
Length = 300
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 160 VRA--IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLI 217
+RA I E+S A GT G++ G+++++ +G+ VSL EL I + GKL+ + LI
Sbjct: 130 IRANLIAELSQAAGTFGMVGGQVLDMQGEGRGVSLEELQVIHANKTGKLLTYPFIAAGLI 189
Query: 218 GGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK--------KKEAGDDEATYPKLMGVA 269
+E EKLRK G+ +GLA+QV DDILD +K+ +ATYP ++G+
Sbjct: 190 AELAEPQQEKLRKTGQLLGLAFQVRDDILDETASFEDLGKTPQKDVAAGKATYPAILGLD 249
Query: 270 GAKRYAKELVAEANQELA 287
GAK + +E ++ A LA
Sbjct: 250 GAKHFFEEQLSAAEILLA 267
>gi|422804492|ref|ZP_16852924.1| polyprenyl synthetase [Escherichia fergusonii B253]
gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253]
Length = 299
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKAQDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ]
Length = 295
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 112/253 (44%), Gaps = 43/253 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML------------------------VTL 133
G+RV L A+CE +GG ACA E++
Sbjct: 43 GKRVRPLLVYAACEALGGTPERAEGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHR 102
Query: 134 ALNRALLCYAVEHMATKTKNV--SPDRLVRAIG-------EISSAVGTRGVLAGRIMEIN 184
A + A A + + V P R R G ++ A G G++ G+ +++
Sbjct: 103 AFDEACAILAGDGLQALAFEVLTDPRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLE 162
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWD 243
+ G+ + L+ + R + G LIEASV G L G ++E D+ L Y + +GLA+QV D
Sbjct: 163 AVGRRLDRDALETMHRHKTGALIEASVRLGALASGRADETDLAALAVYARAIGLAFQVQD 222
Query: 244 DILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K+ +D+ TYP L+G+ AK YA L +A L FD A
Sbjct: 223 DILDVESDTATLGKTQGKDQANDKPTYPALLGLEAAKAYALALRDQALGALEGFDAG-AD 281
Query: 296 PLYHLADFLVSRH 308
PL LA ++V R
Sbjct: 282 PLRALARYIVERR 294
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 43/250 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +AS EL +E MP A A E L T +L
Sbjct: 44 GKRLRPVLVLASKELFD-SELDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHK 102
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL YA + +A N +PD +GE+ G+ ++ G++ +I
Sbjct: 103 QFDEATAVLAGDALLAYAFQLLARHFAN-APDVCANLVGELGETAGSERLIGGQMEDILG 161
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+G +S L+FI + LIE +V G +IGG + E I+ LR YG+ +G+A+Q+ DDI
Sbjct: 162 EGGPLSEDTLNFIHLNKTSALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDI 221
Query: 246 LDNMKKKKEAGD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + G D+ TY KL G+ ++ A + +A Q + P+ A L
Sbjct: 222 LDATSDETTMGKSIGSDAELDKTTYVKLHGLEKSRELAAQRTQKAIQICSAL-PSGAPFL 280
Query: 298 YHLADFLVSR 307
LA L +R
Sbjct: 281 AGLATHLENR 290
>gi|194290326|ref|YP_002006233.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Cupriavidus taiwanensis LMG 19424]
gi|193224161|emb|CAQ70170.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Cupriavidus taiwanensis LMG 19424]
Length = 294
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 9/162 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++P ++ + E++ A G+ G+ G+ +++ + G+ ++ L+ + R++ G L+ ASV
Sbjct: 132 IAPAVRLQLVAELARASGSAGMAGGQAIDLQNVGRAMTRDALEAMHRMKTGALLRASVRM 191
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKL 265
G L G + L +Y VGLA+QV DDILD K+A D+ TY L
Sbjct: 192 GALCGEIDAAGLAALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDAAHDKPTYVSL 251
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
MG+ A+ A L AEA + LA F RAA L LAD +V R
Sbjct: 252 MGLDAARELAGSLRAEAYEALAGFGG-RAARLRDLADLIVLR 292
>gi|110835026|ref|YP_693885.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
SK2]
gi|110648137|emb|CAL17613.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
SK2]
Length = 302
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 93/157 (59%), Gaps = 16/157 (10%)
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE 222
I + A G G+ AG++ ++ ++G+ +++ L+ + L+ G+LI AS+ G + +E
Sbjct: 148 IQHLCQAAGVDGMAAGQMQDMLAQGQQQTVAALEEMHYLKTGRLITASLQLGYFV---AE 204
Query: 223 ED----IEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDE----ATYPKLMGVAG 270
+D + L ++G +GLA+Q+ DDILD + K +G DE +T+P L+G+
Sbjct: 205 KDDPSLLANLTEFGDAIGLAFQIQDDILDVTAATEQLGKPSGSDEKLQKSTFPSLLGLEQ 264
Query: 271 AKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+++ A++L +A Q LA + P RA PL LA ++++R
Sbjct: 265 SQQRARQLCDQAQQTLAGYGP-RALPLQQLAQYIITR 300
>gi|410472460|ref|YP_006895741.1| geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|412338917|ref|YP_006967672.1| geranyltranstransferase [Bordetella bronchiseptica 253]
gi|427815400|ref|ZP_18982464.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
gi|408442570|emb|CCJ49121.1| probable geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|408768751|emb|CCJ53521.1| probable geranyltranstransferase [Bordetella bronchiseptica 253]
gi|410566400|emb|CCN23961.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
Length = 303
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++P +V+A ++ A G++G+ G+ ++++S G+ ++ EL + ++ G ++ SV
Sbjct: 141 IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTL 200
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKL 265
G ++ G S + L Y + +GLA+QV DDILD K+A D++ TY L
Sbjct: 201 GGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSL 260
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
+G+ A+ A+EL A+Q LA + A L LADF+V R +
Sbjct: 261 LGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLRDR 303
>gi|383754044|ref|YP_005432947.1| putative geranylgeranyl pyrophosphate synthase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366096|dbj|BAL82924.1| putative geranylgeranyl pyrophosphate synthase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 293
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+ + VG + + CA EM+ T +L
Sbjct: 44 GKRLRPVLLMAAADAVGAKGTDYLTTGCAMEMIHTYSLIHDDLPAMDDDDYRRGKLTNHK 103
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A E + + + VS ++LV+ EIS A G G++ G+ +++ S
Sbjct: 104 VYGAGMATLAGDALLTLAFE-VILRQQGVSAEKLVQVTREISQAAGPDGMVGGQALDMES 162
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ K +S+ + I + G L A++ G ++GG E+ + L Y GLA+Q+ DDI
Sbjct: 163 EDKQISMETMKNIHLGKTGALFRAAIRSGAILGGADEKALAALTTYADNFGLAFQITDDI 222
Query: 246 LDNMKKK----KEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + + K G DE +TY L + A++ A+E V A L F A L
Sbjct: 223 LDVIGDEAVIGKPVGSDEKNHKSTYVTLTSLEEAQKLAQEAVDTAVDALQIFGD-EADFL 281
Query: 298 YHLADFLVSRHK 309
L +LV R+K
Sbjct: 282 RELVAYLVKRNK 293
>gi|13383251|dbj|BAB39476.1| putative GGPP synthase 1 [Youngia japonica]
Length = 126
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 70/100 (70%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
ALL ++ EH+AT TK VS DR++RAIGE++ +G+ G++AG++++I S+ + +
Sbjct: 26 ALLSFSFEHLATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSRRRRCRIRPFGV 85
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
+ L+E SVV G ++GGGS+E+IEKLRK+ + +GL
Sbjct: 86 YPFTQDAALLEGSVVLGAIMGGGSDEEIEKLRKFARSIGL 125
>gi|416895845|ref|ZP_11925729.1| geranyltranstransferase [Escherichia coli STEC_7v]
gi|417114440|ref|ZP_11965711.1| polyprenyl synthetase [Escherichia coli 1.2741]
gi|422802298|ref|ZP_16850792.1| polyprenyl synthetase [Escherichia coli M863]
gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863]
gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v]
gi|386141515|gb|EIG82665.1| polyprenyl synthetase [Escherichia coli 1.2741]
Length = 299
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKAQDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
Length = 298
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 43/251 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L + + E G + + MP ACA EM+ +L
Sbjct: 50 GKRLRPLLTLMAAETCGSDRTQAMPSACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHK 109
Query: 136 ----------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
ALL A+E +A ++ P R+ E++ A G ++ G+ ++N
Sbjct: 110 AFDEATAILAGDALLARALEIVADGYQD--PLVAARSCRELAKAAGATALVGGQADDLNE 167
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDI 245
+ + L I R + G +I S+ G + G ++ + +L YG+ +GLA+Q+ DD+
Sbjct: 168 QFGSGDVEMLKAIHRRKTGAMICVSLRLGAIAAGADDQQVAQLNLYGEQIGLAFQIVDDL 227
Query: 246 LD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPL 297
LD + K+A + TYP L+GVA ++R A+ L+A A Q LA F RA L
Sbjct: 228 LDYAGDEAALGKRVGKDAERGKLTYPGLIGVAESRRQAESLIAGAKQSLADFGE-RANHL 286
Query: 298 YHLADFLVSRH 308
LA +++ R+
Sbjct: 287 EALAQYILERN 297
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++P +V+A ++ A G++G+ G+ ++++S G+ ++ EL + ++ G ++ SV
Sbjct: 141 IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTL 200
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD--------NMKKKKEAGDDEATYPKL 265
G ++ G S + L Y + +GLA+QV DDILD K+A D++ TY L
Sbjct: 201 GGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSL 260
Query: 266 MGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
+G+ A+ A+EL A+Q LA + A L LADF+V R +
Sbjct: 261 LGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLRDR 303
>gi|422330678|ref|ZP_16411695.1| farnesyl diphosphate synthase [Escherichia coli 4_1_47FAA]
gi|373248382|gb|EHP67812.1| farnesyl diphosphate synthase [Escherichia coli 4_1_47FAA]
Length = 299
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A+ L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARNLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
Query: 156 PDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGV 215
P + + ++ A G+RG+ G+ ++++S GK +SL EL+F+ + G LI A+V+ G
Sbjct: 136 PHVQLEMVRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGA 195
Query: 216 LIGGGSEE-DIEKLRKYGKCVGLAYQVWDDILDNMKKK--------KEAGDDEATYPKLM 266
G +E + L + KC+GLA+QV DDILD K+A +++ TY ++
Sbjct: 196 RCGNRLDETQFKLLDHFAKCMGLAFQVIDDILDTEATTAALGKTAGKDAENNKPTYVSIL 255
Query: 267 GVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G+ A+ A EL EA L F + A L + DF+V R
Sbjct: 256 GIKQARELAHELRQEATGVLNQFG-SEALRLQQVTDFIVQR 295
>gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305]
gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
+L +A E +A K ++ + ++ I ++ A G +G+ G+ +++ S+ K +SLSEL+
Sbjct: 120 SLQTFAFELIA-KDPFLTDLQKIKQIQSLAKAAGAKGMCLGQSLDLISENKAISLSELEL 178
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDIEK--LRKYGKCVGLAYQVWDDILDNM----KK 251
I R + G LI ASV+ G + ++++ K L Y K +GLA+QV DDILD + K
Sbjct: 179 IHRNKTGALIVASVLMGFNLSDYAQDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDKI 238
Query: 252 KKEAGDDE----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG DE +TYPKL+G+ GA A+ L A + L P L LA F++ R
Sbjct: 239 GKTAGSDESLNKSTYPKLLGLEGAMEKAQSLYQTALKALDEL-PFDTRALKALAHFIIQR 297
>gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg]
gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg]
Length = 335
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DR+ RA +SS G G++ G+++++ G +S EL FI L+ G L+EAS + G +
Sbjct: 176 DRVSRAYQMLSSRSGMYGMIGGQVVDVERTGSVLSKEELLFIYELKTGALLEASFLIGAI 235
Query: 217 IGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG--------DDEATYPKLMGV 268
+ G ++E++ + K K VGLA+Q+ DDILD + G + + TY L G+
Sbjct: 236 LSGANQEELIRFTKIAKKVGLAFQIQDDILDVTSTMEVLGKPINSDEKNQKTTYVTLYGI 295
Query: 269 AGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRHK 309
+K+ + L EA +EL + L L +LV+R K
Sbjct: 296 EDSKKEVERLSKEAMEELKAL-KLENSFLTELVSYLVNREK 335
>gi|387127051|ref|YP_006295656.1| polyprenyl synthetase [Methylophaga sp. JAM1]
gi|386274113|gb|AFI84011.1| Polyprenyl synthetase [Methylophaga sp. JAM1]
Length = 288
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML----------------- 130
++Y TL + G+R+ L A+ E + ++ ACA EM+
Sbjct: 31 MRYATL--NGGKRLRAMLVYATGEAFNADPEALDAAACAVEMIHAYSLVHDDMPMMDDDD 88
Query: 131 ---------------VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
L + AL A E + N+ D+ + + ++ A G G+
Sbjct: 89 LRRGKPTCHKAYDEATALLVGDALQTLAFESL--TDNNLPADQQIAMVKYLAHASGVMGM 146
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKC 234
G+ +++ S GK + SEL+ + L+ G LI+ASV+ GV + D+ L +Y
Sbjct: 147 AGGQAIDLASVGKQLDQSELEAMHLLKTGALIKASVMLGVYCSSNYKPADLSHLDQYAAA 206
Query: 235 VGLAYQVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQEL 286
+GLA+QV DD+LD + K+ G D A TYP LMG+ A++ A+ LV EA L
Sbjct: 207 IGLAFQVQDDVLDVIADTVTLGKQQGADIARNKPTYPALMGLKAAQQKAQALVDEALAAL 266
Query: 287 AYFDPTRAAPLYHLADFLVSR 307
D ++ + LA+F+V R
Sbjct: 267 DNID-SQCLAMRALANFVVQR 286
>gi|392307993|ref|ZP_10270527.1| geranyltranstransferase [Pseudoalteromonas citrea NCIMB 1889]
Length = 295
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL A E +++ V R + I +S A G +G++ G+ ++I +++SL EL+
Sbjct: 116 ALQSLAFELISSHRFAVPESRQISMIKALSQAAGLQGMVGGQALDIAGTDRNISLEELEQ 175
Query: 198 IKRLRCGKLIEASVVCGVLIGGG-SEEDIEKLRKYGKCVGLAYQVWDDILD--------N 248
I RL+ G L+ ++ G L D+E L YG+ +GLA+QV DDILD
Sbjct: 176 IHRLKTGALLTCAIELGALCAPQLDSSDLENLVLYGQHIGLAFQVQDDILDIEGDTHTLG 235
Query: 249 MKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
+ + ++++TYP ++G+ GAK+ A++L +A Q+L + L LA +++ R
Sbjct: 236 KPQGSDINNNKSTYPAILGLEGAKQKAQDLTEQAIQQLNNVNAD-TEMLAKLAKYIIER 293
>gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL + E++ A G G+ G+ +++ ++G+ V+L +L+ I R + G LI A+V G L
Sbjct: 137 DRLA-MVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGAL 195
Query: 217 IGG-GSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + + L +Y + +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 196 SAGVQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLG 255
Query: 268 VAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
+ A+R A++L+ EA Q L + L LAD+++ R K
Sbjct: 256 LEQAQRKARDLIEEARQSLNELAAQSLDTSALEALADYIIQRDK 299
>gi|422764951|ref|ZP_16818678.1| polyprenyl synthetase [Escherichia coli E1520]
gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
VS + I E++SA G G+ G+ ++++++GK V L L+ I R + G LI A+V
Sbjct: 133 VSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRL 192
Query: 214 GVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPK 264
G L G + L KY + +GLA+QV DDILD + K++ D + +TYP
Sbjct: 193 GALSAGDKGCRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPA 252
Query: 265 LMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
L+G+ A++ A++L+ +A Q L + L LAD+++ R+K
Sbjct: 253 LLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK 299
>gi|386010188|ref|YP_005928465.1| IspA protein [Pseudomonas putida BIRD-1]
gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1]
Length = 295
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 10/152 (6%)
Query: 166 ISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-ED 224
++ A G G++ G+ +++ S G+ + L+F+ R + G LIEASV G L +E
Sbjct: 144 LAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEPAQ 203
Query: 225 IEKLRKYGKCVGLAYQVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAK 276
++ L+ Y + +GLA+QV DDILD + K++ A D+ TYP L+G+ AK YA
Sbjct: 204 LDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKVYAI 263
Query: 277 ELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
EL +A L F T A PL LA ++V R
Sbjct: 264 ELRDQALAALQGFGET-AEPLRALARYIVERR 294
>gi|392977859|ref|YP_006476447.1| geranyltranstransferase [Enterobacter cloacae subsp. dissolvens
SDM]
gi|392323792|gb|AFM58745.1| geranyltranstransferase [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Query: 157 DRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVL 216
DRL + E++ A G G+ G+ +++ ++G+ V+L +L+ I R + G LI A+V G L
Sbjct: 137 DRLA-MVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGAL 195
Query: 217 IGG-GSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMG 267
G + + L +Y + +GLA+QV DDILD + K++ D + +TYP L+G
Sbjct: 196 SAGEQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLG 255
Query: 268 VAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
+ A+R A++L+ EA Q L + L LAD+++ R K
Sbjct: 256 LEQAQRKARDLIEEARQSLNELAAQSLDTSALEALADYIIQRDK 299
>gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 91/158 (57%), Gaps = 11/158 (6%)
Query: 163 IGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG-GS 221
+ E++ A G G+ G+ +++ ++G+ V+L +L+ I R + G LI A+V G L G
Sbjct: 142 VSELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGALSAGEQG 201
Query: 222 EEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KKEAGDDE---ATYPKLMGVAGAKR 273
+ + L +Y + +GLA+QV DDILD + K++ D + +TYP L+G+ A+R
Sbjct: 202 RKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAQR 261
Query: 274 YAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRHK 309
A++L+ +A Q L+ + L LAD+++ R+K
Sbjct: 262 KARDLIEDARQSLSQLAAQSLDTSALEALADYIIQRNK 299
>gi|365969244|ref|YP_004950804.1| Farnesyl diphosphate synthase [Enterobacter cloacae EcWSU1]
gi|365748157|gb|AEW72384.1| Farnesyl diphosphate synthase [Enterobacter cloacae EcWSU1]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L +++ A + DRL I E++ A G G+ G+ +++ ++G+ V+L +L+ I
Sbjct: 120 LAFSILSDAPMAEVADRDRL-SMISELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIH 178
Query: 200 RLRCGKLIEASVVCGVLIGG-GSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KK 253
R + G LI A+V G L G + + L +Y + +GLA+QV DDILD + K+
Sbjct: 179 RHKTGALIRAAVRLGALSAGEQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLGKR 238
Query: 254 EAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRH 308
+ D + +TYP L+G+ A+R A++L+ +A Q L + L LAD+++ R
Sbjct: 239 QGADQQLGKSTYPALLGLEQAQRKARDLIEDARQSLNQLAAQSLDTSALEALADYIIQRD 298
Query: 309 K 309
K
Sbjct: 299 K 299
>gi|383318377|ref|YP_005379219.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
gi|379045481|gb|AFC87537.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
Length = 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 9/156 (5%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V I ++ A G G++ G+ +++ S+G +SL +L+ + + G LI S + G
Sbjct: 158 VAMIASLAHASGPLGMVGGQAVDMESEGASLSLEQLESLHARKTGALIRVSCELAAIAGA 217
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGA 271
S + L +YG C+GLA+Q+ DD+LD K AG D+A T+P L+G+ A
Sbjct: 218 ASTPVAQALARYGSCLGLAFQIQDDVLDQTADTATLGKTAGKDQAQQKSTFPSLLGLDTA 277
Query: 272 KRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++ A +L +A +E+A + APL LADF+ R
Sbjct: 278 RQRASDLFDQA-REIAIEISGQPAPLLWLADFIQKR 312
>gi|379704875|ref|YP_005203334.1| farnesyl diphosphate synthase [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374681574|gb|AEZ61863.1| farnesyl diphosphate synthase [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 289
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 13/145 (8%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++ D +R I E+S A GT G++ G+++++ + + +SLSEL I + GKL+ VV
Sbjct: 124 LTADIKIRLIAELSHASGTYGMVGGQMLDMKGEERKLSLSELQLIHSNKTGKLLTFPVVA 183
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKL 265
++ G +E++ LRK G +GLA+QV DDILD +E G D+ATYP L
Sbjct: 184 AGIVAGVEDEELANLRKTGSLIGLAFQVRDDILDVTASFEEIGKTPKKDLLADKATYPSL 243
Query: 266 MGVAGAKRYAKELVAEA-NQELAYF 289
+G+ K Y E++ ++ +Q LA F
Sbjct: 244 LGL--DKSY--EILNQSLDQALAIF 264
>gi|422619559|ref|ZP_16688248.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
gi|330899928|gb|EGH31347.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
Length = 281
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 50/239 (20%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+RV L A+CE +GG ACA E++ +L
Sbjct: 43 GKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHK 102
Query: 136 ---------------NRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRI 180
+ A H+ ++ ++ + +++A G G++ G+
Sbjct: 103 AFDEACAILAGDGLQSLAFTALLAPHLTSRDAETR----LQMVTALATAAGPAGMVGGQA 158
Query: 181 MEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAY 239
+++ S G + + L+++ R + G LIEASV G L G +++ ++ L+ Y + +GLA+
Sbjct: 159 IDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAF 218
Query: 240 QVWDDILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFD 290
QV DDILD + K++ A D+ TYP L+G+ AK YA EL +A Q L+ FD
Sbjct: 219 QVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQALQALSPFD 277
>gi|373494873|ref|ZP_09585470.1| hypothetical protein HMPREF0380_01108 [Eubacterium infirmum F0142]
gi|371967235|gb|EHO84707.1| hypothetical protein HMPREF0380_01108 [Eubacterium infirmum F0142]
Length = 297
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 52/242 (21%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL---------------------- 135
G+R+ L +A+CE GGN +P ACA E + T +L
Sbjct: 42 GKRLRPVLLLAACEFAGGNSVEALPFACAMEYIHTYSLIHDDLPAMDDDDLRRGKPTNHK 101
Query: 136 ----------NRALLCYAVEHMATKTKNV-----SPDRL---VRAIGEISSAVGTRGVLA 177
LL A E M KN+ PD L + A+ I+ A G G++A
Sbjct: 102 IFGDGMATLAGDGLLNTAFEVM---NKNLLMYFDKPDELKKRINAMYCIAKAAGVGGMIA 158
Query: 178 GRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGL 237
G+ +I ++ D + L++I + G LI A+V G+ +G +E ++ + KY +C+GL
Sbjct: 159 GQASDIENENTDCTNELLEYIHINKTGALITAAVRAGLYLGNADDEMVKNMTKYAECMGL 218
Query: 238 AYQVWDDILDNM----KKKKEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELA-Y 288
A+Q+ DDILD K K G D A TY + G+ + +EL +A + +A Y
Sbjct: 219 AFQIADDILDVKGNPEKLGKNTGADAAKSKTTYISVNGLENSVNRLEELTDQAVEAIAPY 278
Query: 289 FD 290
+D
Sbjct: 279 YD 280
>gi|309320748|pdb|3P41|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
And Isoprenyl Pyrophosphate
Length = 303
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEMLVTL------------------------ 133
G+RV L A+CE +GG ACA E++
Sbjct: 51 GKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDDLRRGQPTTHK 110
Query: 134 ALNRALLCYAVEHMAT---------KTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEIN 184
A + A A + + + + S + +R + ++ A G G + G+ +++
Sbjct: 111 AFDEAXAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAGXVGGQAIDLG 170
Query: 185 SKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWD 243
S G + L++ R + G LIEASV+ G L G +E+ +++ L+ Y + +GLA+QV D
Sbjct: 171 SVGLKLDQQALEYXHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQD 230
Query: 244 DILD------NMKKKKEA--GDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAA 295
DILD + K++ A D+ TYP L+G+A AK YA EL +A L FD A
Sbjct: 231 DILDVESDTATLGKRQGADIARDKPTYPALLGLAAAKEYALELRDQALHALRPFDAA-AE 289
Query: 296 PLYHLADFLVSR 307
PL LA ++V R
Sbjct: 290 PLRELARYIVER 301
>gi|62959221|gb|AAY23718.1| farnesyl diphosphate synthase [Synechococcus elongatus CCMP1630]
Length = 145
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGK-DVSLSELD 196
ALL YA E++A +T ++ +RL++ I + AVG G++ G+++++ S+GK DVS+ L+
Sbjct: 34 ALLSYAFEYVA-RTPDIPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLN 92
Query: 197 FIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD 247
FI + G L E V G ++ G E+++ L +Y + +GLA+Q+ DDILD
Sbjct: 93 FIHTHKTGALPEVCVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 143
>gi|94311552|ref|YP_584762.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
Length = 294
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 44/260 (16%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEML----------------- 130
++Y L G+RV L A+ E+VG + ACA EM+
Sbjct: 37 MRYAVLGG--GKRVRPLLVHAAGEVVGATPEACDAAACAVEMIHAYSLVHDDMPCMDDDD 94
Query: 131 ---------------VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGV 175
L + AL A +A +T ++ + ++ + E++ A G+ G+
Sbjct: 95 LRRGRPTVHKAYDEATALLVGDALQSQAFIVLA-QTPALAAEARLKVVAELAVASGSIGM 153
Query: 176 LAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCV 235
G+ +++ + GK ++ L+ + R++ G L+ ASV G L G + + L +Y V
Sbjct: 154 CGGQAIDLQNVGKAMTREALEGMHRMKTGALLRASVRMGALCGNIDQAGLVALDRYAAAV 213
Query: 236 GLAYQVWDDILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELA 287
GLA+QV DDILD K+A +D+ TY L+G+ A+ A +L +A++ L
Sbjct: 214 GLAFQVVDDILDVTADTATLGKTAGKDAANDKPTYVSLLGLDAARELAAQLRTDAHEALE 273
Query: 288 YFDPTRAAPLYHLADFLVSR 307
F TRA L LAD +V R
Sbjct: 274 GFG-TRAGRLAELADLIVLR 292
>gi|421731050|ref|ZP_16170176.1| hypothetical protein WYY_08174 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407075204|gb|EKE48191.1| hypothetical protein WYY_08174 [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 296
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 138/292 (47%), Gaps = 47/292 (16%)
Query: 62 QIDEYMTLKAKKINKAL---FEGAAVPLILQYPTLPNHE--GERVHGTLCIASCELVGGN 116
++D ++ + + I + L E A+P L+ L + E G+R+ + +A G +
Sbjct: 4 KLDAFLASRKQLIEQQLSLYTERLAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKD 63
Query: 117 ESSVMPLACAAEMLVTLAL-------------------NRALLCYAVEHMATK------- 150
E +P+ CA EM+ T +L N + A +A
Sbjct: 64 EKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESF 123
Query: 151 -------TKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
++ VS ++ +R + E+ SA GT G++ G+ ++ ++ K ++L EL+ I +
Sbjct: 124 KLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKT 183
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAG------- 256
KL+ SV G ++ E+++EKLR + +G+ +Q+ DDILD +++ G
Sbjct: 184 AKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDT 243
Query: 257 -DDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
++++TYP L+ + GAK ++EA + ++ + L+ L D + +R
Sbjct: 244 SNEKSTYPSLLTLEGAKEKLAYHISEAKRIISGLSLQKEL-LHDLCDLIAAR 294
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E + T+ +S ++ + + ++ A G +G+ G+ +++ S+ K +SL+EL+
Sbjct: 127 ALQAFAFE-ILTQAPALSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQ 185
Query: 198 IKRLRCGKLIEASVVCGVLIG--GGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEA 255
I R + G L+ A++ G + G + ++L++Y + +GLA+QV DDILD + +
Sbjct: 186 IHRNKTGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESEVL 245
Query: 256 GD--------DEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
G D++TYPKL+G+ GAK+ A+EL EA L P L + +F+V+R
Sbjct: 246 GKTVGSDLMADKSTYPKLLGLDGAKQKAQELYREAISTLDEL-PFDTQALRAITEFVVNR 304
>gi|383784947|ref|YP_005469517.1| geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
gi|383083860|dbj|BAM07387.1| putative geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
Length = 307
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 88/150 (58%), Gaps = 10/150 (6%)
Query: 138 ALLCYAVEHMAT-KTKNVSPDRLVRAI-GEISSAVGTRGVLAGRIMEINSKGKDVSLSEL 195
ALL YA ++ + +S +++ A+ E+S G G++ G+++++ S+G+ +SL +L
Sbjct: 127 ALLTYAFTILSDPRYDELSSEKVRLAVVRELSHGSGLAGMVGGQMLDMESEGRRISLEDL 186
Query: 196 DFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD-------- 247
+F+ R + G LI +SV G L+G + L +YG+ VG+A+Q+ DD+LD
Sbjct: 187 EFLHRHKTGALILSSVRIGALLGEAGASEFNSLDQYGESVGVAFQIADDLLDVEGDAATL 246
Query: 248 NMKKKKEAGDDEATYPKLMGVAGAKRYAKE 277
+K+ + TYP L+G+ GAK+ AKE
Sbjct: 247 GKAAQKDNNHLKNTYPALLGIDGAKKMAKE 276
>gi|171778673|ref|ZP_02919769.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282630|gb|EDT48054.1| polyprenyl synthetase [Streptococcus infantarius subsp. infantarius
ATCC BAA-102]
Length = 289
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 13/145 (8%)
Query: 154 VSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVC 213
++ D +R I E+S A GT G++ G+++++ + + +SLSEL I + GKL+ VV
Sbjct: 124 LTADIKIRLIAELSHASGTYGMVGGQMLDMKGEERKLSLSELQLIHSNKTGKLLTFPVVA 183
Query: 214 GVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKL 265
++ G +E++ LRK G +GLA+QV DDILD +E G D+ATYP L
Sbjct: 184 AGIVAGVEDEELANLRKTGSLIGLAFQVRDDILDVTASFEEIGKTPKKDLLADKATYPSL 243
Query: 266 MGVAGAKRYAKELVAEA-NQELAYF 289
+G+ K Y E++ ++ +Q LA F
Sbjct: 244 LGL--DKSY--EILNQSLDQALAIF 264
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 113/251 (45%), Gaps = 42/251 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+RV L A+ EL NE V A A E++
Sbjct: 46 GKRVRPLLAFAAGELNKANEERVTIAAIAVELIHVYSLVHDDLPCMDDDVLRRGKPTCHI 105
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
+ L +L A + +A + +P + I ++ A G+RG+ G+ +++ S
Sbjct: 106 EYGEAIALLTGDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAAGSRGMAGGQAVDLAS 165
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEE-DIEKLRKYGKCVGLAYQVWDD 244
G+ +SL EL+F+ + G LI A+V+ G G +E + L + KC+GLA+QV DD
Sbjct: 166 VGRTLSLPELEFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALDHFAKCIGLAFQVVDD 225
Query: 245 ILD--------NMKKKKEAGDDEATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K+A +++ TY ++G A+ A+EL EA L F+ A
Sbjct: 226 VLDAEATTAALGKTAGKDAENNKPTYVSILGSKRARELAEELRREAYASLEMFEAA-AGR 284
Query: 297 LYHLADFLVSR 307
L + DF++ R
Sbjct: 285 LRQVTDFIIHR 295
>gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165]
gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165]
Length = 297
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 138 ALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDF 197
AL +A E +A +++ ++ V + ++ + G +G+ G+ +++ S+ K ++L EL+
Sbjct: 118 ALQSFAFELLAFD-PSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELER 176
Query: 198 IKRLRCGKLIEASVVCGVLIGGGSEEDI--EKLRKYGKCVGLAYQVWDDILDNMKKK--- 252
I R + G LI ASV+ G + +++ ++L +Y + +GLA+QV DDILD +
Sbjct: 177 IHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDVIGNSEVI 236
Query: 253 -KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
K AG D+A TYPKL+G+ GAK+ A+ L A + L P L LA+F+V R
Sbjct: 237 GKTAGSDQALDKSTYPKLLGLEGAKQKAESLYQTALKALETL-PFDTTALAALAEFIVKR 295
>gi|336114330|ref|YP_004569097.1| polyprenyl synthetase [Bacillus coagulans 2-6]
gi|335367760|gb|AEH53711.1| Polyprenyl synthetase [Bacillus coagulans 2-6]
Length = 205
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 15/141 (10%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
V+ I ++ + G G++AG++ ++ + K ++L EL +I + GKL+ SV+ G LIGG
Sbjct: 49 VKLIALLAKSAGPEGMVAGQVADMEGENKTLTLGELQYIHAHKTGKLLRFSVLAGALIGG 108
Query: 220 GSEEDIEKLRKYGKCVGLAYQVWDDILD----NMKKKKEAGDDE----ATYPKLMGVAGA 271
S E +EK ++ +GLA+Q+ DDILD K K G DE +TYP L+ + GA
Sbjct: 109 ASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEKIGKRVGSDESRHKSTYPALLTLEGA 168
Query: 272 K-------RYAKELVAEANQE 285
K R AK+ +AE E
Sbjct: 169 KQELRRHTRLAKQCLAETGAE 189
>gi|401762516|ref|YP_006577523.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400174050|gb|AFP68899.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 299
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 140 LCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIK 199
L +++ A + DRL I E++ A G G+ G+ +++ ++G+ V+L +L+ I
Sbjct: 120 LAFSILSDAPMAEVADRDRLA-MISELAMASGVAGMCGGQALDLEAEGRQVNLEQLERIH 178
Query: 200 RLRCGKLIEASVVCGVLIGG-GSEEDIEKLRKYGKCVGLAYQVWDDILDNMKK-----KK 253
R + G LI ++V G L G + + L +Y + +GLA+QV DDILD + K+
Sbjct: 179 RHKTGALIRSAVRLGALSAGEQGRKALPTLDRYAESIGLAFQVQDDILDVVGDTATLGKR 238
Query: 254 EAGDDE---ATYPKLMGVAGAKRYAKELVAEANQELAYF--DPTRAAPLYHLADFLVSRH 308
+ D + +TYP L+G+ A+R A++L+ +A Q L + L LAD+++ R
Sbjct: 239 QGADQQLGKSTYPALLGLEQAQRKARDLIDDARQSLNVLAAQSLDTSALEALADYIIQRD 298
Query: 309 K 309
K
Sbjct: 299 K 299
>gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
Length = 300
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Query: 160 VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGG 219
+ + E++ A G G+ G+ ++++++GK V L +L+ I R + G LI +V G L G
Sbjct: 143 IAMVSELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAG 202
Query: 220 GSEEDI-EKLRKYGKCVGLAYQVWDDILDNMKKKKEAGD--------DEATYPKLMGVAG 270
I +L KY + +GLA+QV DDILD + + G D++TYP L+G+ G
Sbjct: 203 DKGVAILPQLDKYSEAIGLAFQVQDDILDVISDTETLGKPQGSDLALDKSTYPALLGLDG 262
Query: 271 AKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSRH 308
A+ A++L EA Q LA P + L A +++ R+
Sbjct: 263 AQEKAQQLYQEALQALAAI-PYNTSQLEVFARYIIERN 299
>gi|394988076|ref|ZP_10380914.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
gi|393792534|dbj|GAB70553.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
Length = 296
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 42/252 (16%)
Query: 98 GERVHGTLCIASCELVGGNESSVMPLACAAEML--------------------------- 130
G+R+ L A+ E+VG V A A E++
Sbjct: 45 GKRIRPLLAFAAGEVVGAGPQCVDAAAAAVELIHAYSLVHDDLPCMDDDSLRRGKPTCHH 104
Query: 131 -----VTLALNRALLCYAVEHMATKTKNVSPDRLVRAIGEISSAVGTRGVLAGRIMEINS 185
L + +L A + +A + +P + + ++ A G+RG+ G+ ++ S
Sbjct: 105 EYDEATALLVGDSLQTLAFQVLADRPLADAPAVQLEMMKILAVAAGSRGMAGGQAIDGES 164
Query: 186 KGKDVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSE-EDIEKLRKYGKCVGLAYQVWDD 244
GK +SL EL+F+ + G LI ASV G L G G E ++E L Y KC+GLA+QV DD
Sbjct: 165 VGKTLSLPELEFMHIHKTGALIRASVQLGALCGKGLENSEMEHLLHYAKCIGLAFQVVDD 224
Query: 245 ILDNMKKK----KEAGDD----EATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAP 296
+LD K AG D + TY ++G A+ +A +L +A Q L F RA
Sbjct: 225 VLDAESNTATLGKTAGKDAEANKPTYVSILGANAARAFAADLHRDALQSLEVFG-ARAER 283
Query: 297 LYHLADFLVSRH 308
L +ADF+V R
Sbjct: 284 LRQIADFIVKRQ 295
>gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
gi|167711696|gb|EDS22275.1| polyprenyl synthetase [Clostridium sp. SS2/1]
gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SSC/2]
Length = 297
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 55/292 (18%)
Query: 60 EIQIDEYMTLKAKKINKALFEGAAVPLILQYPTLPNHEGERVHGTLCIASCELVGGNESS 119
EI +DEY+ + EG ++ T G+R+ L + ++ GG E
Sbjct: 15 EIILDEYLPAQ---------EGLQKTVLTAMNTTVKAGGKRLRPMLINETYQMFGGKEDI 65
Query: 120 VMPLACAAEMLVTLAL--------------------------------NRALLCYAVEHM 147
V P A EM+ T +L ALL YA E +
Sbjct: 66 VKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNYAYE-V 124
Query: 148 ATKTKNVSP-DRL---VRAIGEISSAVGTRGVLAGRIMEINSKGKDVSLSELDFIKRLRC 203
ATK +++ D++ V AI ++S G G++ G++ ++ +G +S+ ++ FI + +
Sbjct: 125 ATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQILFIHKNKT 184
Query: 204 GKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILDNMKKKKE----AGDDE 259
LIEA ++ G ++ G S+ED+ K+ + G+ +GLA+Q+ DDILD ++E G DE
Sbjct: 185 SALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDEEEIGKPVGSDE 244
Query: 260 ----ATYPKLMGVAGAKRYAKELVAEANQELAYFDPTRAAPLYHLADFLVSR 307
TY L G+ ++R +++ +A L +D L +L FL+ R
Sbjct: 245 KNHKTTYVTLKGLERSQRDVEDISKKAIDILEKYDKGDCY-LTNLTRFLIHR 295
>gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
Length = 298
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 133 LALNRALLCYAVEHMATKTKNV-SPDRLVRAIGEISSAVGTRGVLAGRIMEINSKGKDVS 191
+ + ALL YA ++ K N+ S +++ I + S+ G G++ G++++I S+ K ++
Sbjct: 112 ILIGDALLTYAFYMLSEKNLNILSFEQITNIISKTSAYSGINGMIGGQMIDIESENKKIN 171
Query: 192 LSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYGKCVGLAYQVWDDILD---- 247
L L +I + + GKLI+ + +I SE+ L +Y + +GLA+QV DDILD
Sbjct: 172 LETLKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGT 231
Query: 248 --NMKKKKEAGDD--EATYPKLMGVAGAKRYAKELVAEANQEL-AYFDPTRAAPLYHLAD 302
++ K + DD +ATYP ++G+ +K+ E V A + + F + L LAD
Sbjct: 232 FEDLGKPVGSDDDLHKATYPSILGMEESKKILNETVERAKKIIHNMFGEEKGKILISLAD 291
Query: 303 FLVSR 307
F+ R
Sbjct: 292 FIRER 296
>gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 297
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 45/263 (17%)
Query: 88 LQYPTLPNHEGERVHGTLCIASCELVGGNESSVMPLACAAEMLVTLAL------------ 135
++Y L G+R+ L +A ++GG+ VMP A + E + T +L
Sbjct: 35 MEYSLLAG--GKRLRPVLTLAWATMLGGDAERVMPFAASLECIHTYSLIHDDLPAMDDDD 92
Query: 136 ------------NRALLCYAVEHMATKT----------KNVSPDRLVRAIGEISSAVGTR 173
+ A A + + T++ + + +R++RA+ ++ A G+
Sbjct: 93 LRRGRPSNHKRYDEATAILAGDGLLTESFVLMTEASLIRGLPAERVLRAVSVLAVAAGSG 152
Query: 174 GVLAGRIMEINSKGK-DVSLSELDFIKRLRCGKLIEASVVCGVLIGGGSEEDIEKLRKYG 232
G++ G+ +++ G+ +V+L EL + ++ G LI A+ CG ++ G SE D+E R+YG
Sbjct: 153 GMVGGQAVDMEFTGRAEVALDELRAMHAMKTGALITAACECGAVLAGASERDVENAREYG 212
Query: 233 KCVGLAYQVWDDILDNMKKK----KEAGDDEA----TYPKLMGVAGAKRYAKELVAEANQ 284
+ VG+A+Q+ DD+LD + K AG DEA TYP L+G+ ++ A+ EA +
Sbjct: 213 RAVGVAFQIVDDVLDVVGDTGTLGKPAGSDEAMGKSTYPALVGLDRSRELAEGYAKEALE 272
Query: 285 ELAYFDPTRAAPLYHLADFLVSR 307
L+ ++ + L L+ ++V R
Sbjct: 273 RLSSYNGSEKLFLADLSRYIVDR 295
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,703,082,922
Number of Sequences: 23463169
Number of extensions: 192838260
Number of successful extensions: 579063
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4323
Number of HSP's successfully gapped in prelim test: 2090
Number of HSP's that attempted gapping in prelim test: 569648
Number of HSP's gapped (non-prelim): 8186
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)