Query 021669
Match_columns 309
No_of_seqs 153 out of 1550
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 07:33:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021669.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021669hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.7E-48 9.3E-53 349.0 37.6 286 4-299 101-409 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 1.5E-47 5E-52 330.7 40.1 288 1-297 3-300 (304)
3 1got_B GT-beta; complex (GTP-b 100.0 5.3E-47 1.8E-51 332.3 40.1 287 2-297 46-339 (340)
4 3ow8_A WD repeat-containing pr 100.0 3.8E-47 1.3E-51 330.8 37.5 285 4-298 25-318 (321)
5 2pbi_B Guanine nucleotide-bind 100.0 1.2E-46 4.2E-51 331.9 39.8 288 2-297 55-353 (354)
6 3iz6_a 40S ribosomal protein R 100.0 2.3E-47 7.9E-52 339.6 34.9 292 3-300 58-374 (380)
7 4ery_A WD repeat-containing pr 100.0 1.1E-44 3.7E-49 313.3 42.3 289 3-298 15-311 (312)
8 3frx_A Guanine nucleotide-bind 100.0 2.8E-45 9.6E-50 318.6 36.4 283 2-297 8-315 (319)
9 4g56_B MGC81050 protein; prote 100.0 2.3E-45 7.9E-50 324.1 29.7 283 7-299 38-341 (357)
10 2xzm_R RACK1; ribosome, transl 100.0 5.8E-44 2E-48 313.3 37.3 284 2-298 12-337 (343)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.5E-44 1.2E-48 315.0 35.3 289 2-297 6-333 (345)
12 1erj_A Transcriptional repress 100.0 8.2E-44 2.8E-48 318.1 37.9 284 9-299 62-387 (393)
13 4gqb_B Methylosome protein 50; 100.0 2.5E-44 8.5E-49 315.9 33.4 281 8-299 27-331 (344)
14 1nr0_A Actin interacting prote 100.0 5.4E-44 1.8E-48 336.6 37.6 292 2-298 181-566 (611)
15 2hes_X YDR267CP; beta-propelle 100.0 1.9E-42 6.6E-47 302.1 35.5 289 1-299 4-326 (330)
16 1nr0_A Actin interacting prote 100.0 1.7E-42 5.7E-47 326.4 36.9 286 3-297 139-520 (611)
17 4aow_A Guanine nucleotide-bind 100.0 8.6E-42 2.9E-46 297.4 38.4 286 2-299 29-335 (340)
18 3dm0_A Maltose-binding peripla 100.0 2E-41 7E-46 323.4 38.4 285 4-300 375-692 (694)
19 2ymu_A WD-40 repeat protein; u 100.0 4.4E-41 1.5E-45 313.7 38.9 280 2-297 294-576 (577)
20 3zwl_B Eukaryotic translation 100.0 1.5E-40 5.1E-45 292.0 38.6 284 4-298 25-345 (369)
21 2pm7_B Protein transport prote 100.0 3E-41 1E-45 290.2 32.4 250 4-300 2-286 (297)
22 1vyh_C Platelet-activating fac 100.0 4.7E-41 1.6E-45 301.9 33.1 247 2-258 141-410 (410)
23 3ow8_A WD repeat-containing pr 100.0 3E-40 1E-44 287.3 36.5 245 4-258 73-320 (321)
24 1sq9_A Antiviral protein SKI8; 100.0 4.7E-41 1.6E-45 299.2 31.2 287 3-299 8-393 (397)
25 3ei3_B DNA damage-binding prot 100.0 3.3E-40 1.1E-44 293.0 35.3 289 2-299 64-380 (383)
26 2ymu_A WD-40 repeat protein; u 100.0 1.2E-39 4.3E-44 303.9 39.5 291 2-308 253-548 (577)
27 4gqb_B Methylosome protein 50; 100.0 5.1E-40 1.7E-44 288.5 33.5 241 9-261 80-333 (344)
28 3mmy_A MRNA export factor; mRN 100.0 5.4E-40 1.9E-44 288.3 31.8 283 2-291 30-336 (368)
29 3odt_A Protein DOA1; ubiquitin 100.0 2.2E-39 7.4E-44 278.8 34.1 279 1-299 8-296 (313)
30 3i2n_A WD repeat-containing pr 100.0 2.1E-40 7E-45 290.3 27.9 291 5-303 12-355 (357)
31 1gxr_A ESG1, transducin-like e 100.0 1E-38 3.4E-43 277.2 37.6 278 7-298 47-334 (337)
32 1r5m_A SIR4-interacting protei 100.0 1.5E-39 5.2E-44 290.9 32.4 278 8-297 42-359 (425)
33 3bg1_A Protein SEC13 homolog; 100.0 1.3E-40 4.6E-45 288.7 23.5 248 5-298 7-292 (316)
34 1got_B GT-beta; complex (GTP-b 100.0 1.1E-38 3.8E-43 279.4 34.4 246 2-256 88-340 (340)
35 1yfq_A Cell cycle arrest prote 100.0 2.1E-39 7.2E-44 282.6 29.7 283 1-293 1-315 (342)
36 2pm9_A Protein WEB1, protein t 100.0 9.6E-40 3.3E-44 292.3 27.4 282 9-299 65-412 (416)
37 3k26_A Polycomb protein EED; W 100.0 3.4E-39 1.2E-43 283.3 30.2 286 7-300 14-365 (366)
38 3dw8_B Serine/threonine-protei 100.0 1.2E-38 4.2E-43 287.8 34.5 282 10-297 27-444 (447)
39 1k8k_C P40, ARP2/3 complex 41 100.0 5E-39 1.7E-43 283.2 31.1 291 6-303 3-363 (372)
40 4e54_B DNA damage-binding prot 100.0 5E-39 1.7E-43 290.7 31.7 292 3-299 111-430 (435)
41 4g56_B MGC81050 protein; prote 100.0 6.5E-39 2.2E-43 282.9 30.8 247 5-263 88-347 (357)
42 3mkq_A Coatomer beta'-subunit; 100.0 6.1E-38 2.1E-42 303.6 39.9 287 1-296 3-299 (814)
43 4h5i_A Guanine nucleotide-exch 100.0 3E-38 1E-42 279.4 33.6 284 12-299 15-341 (365)
44 3frx_A Guanine nucleotide-bind 100.0 4.4E-38 1.5E-42 273.3 33.7 248 3-260 57-318 (319)
45 3gre_A Serine/threonine-protei 100.0 7.8E-39 2.7E-43 289.0 30.1 286 2-295 53-436 (437)
46 3vl1_A 26S proteasome regulato 100.0 2.4E-38 8.3E-43 283.8 32.9 281 7-297 94-417 (420)
47 2ynn_A Coatomer subunit beta'; 100.0 1.1E-37 3.6E-42 269.0 34.0 247 44-298 4-258 (304)
48 1pgu_A Actin interacting prote 100.0 5.4E-38 1.8E-42 294.3 33.3 289 3-298 152-613 (615)
49 3dwl_C Actin-related protein 2 100.0 1.2E-39 4E-44 288.5 20.7 291 1-299 1-377 (377)
50 1r5m_A SIR4-interacting protei 100.0 6.1E-38 2.1E-42 280.5 31.9 277 10-299 107-423 (425)
51 4gga_A P55CDC, cell division c 100.0 2.6E-37 9E-42 278.1 36.2 276 13-299 107-393 (420)
52 2pbi_B Guanine nucleotide-bind 100.0 2E-37 6.8E-42 273.0 34.3 246 3-256 98-354 (354)
53 3v7d_B Cell division control p 100.0 4.5E-37 1.5E-41 279.5 37.3 279 4-298 114-420 (464)
54 2pm9_A Protein WEB1, protein t 100.0 1.6E-38 5.6E-43 284.2 26.9 282 10-301 11-337 (416)
55 4ggc_A P55CDC, cell division c 100.0 8.1E-37 2.8E-41 263.5 36.3 277 14-301 28-315 (318)
56 3vl1_A 26S proteasome regulato 100.0 3.2E-38 1.1E-42 283.1 28.3 277 14-301 59-365 (420)
57 3f3f_A Nucleoporin SEH1; struc 100.0 7.9E-38 2.7E-42 271.8 29.8 261 4-298 4-336 (351)
58 3sfz_A APAF-1, apoptotic pepti 100.0 7.9E-37 2.7E-41 308.5 40.2 288 2-298 648-1033(1249)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.4E-37 2.5E-41 268.4 34.9 256 8-266 58-342 (345)
60 2hes_X YDR267CP; beta-propelle 100.0 4.2E-37 1.4E-41 268.3 32.6 252 4-259 49-328 (330)
61 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-36 6.5E-41 274.3 37.6 280 2-299 150-440 (445)
62 3jrp_A Fusion protein of prote 100.0 1.5E-37 5.3E-42 274.0 29.5 256 1-259 1-287 (379)
63 1erj_A Transcriptional repress 100.0 1.1E-36 3.8E-41 271.9 34.8 241 13-260 125-390 (393)
64 4a11_B DNA excision repair pro 100.0 1E-36 3.6E-41 271.2 33.1 292 3-298 35-364 (408)
65 2j04_B YDR362CP, TAU91; beta p 100.0 3.9E-38 1.3E-42 290.4 24.5 283 5-299 201-517 (524)
66 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-36 5.9E-41 306.0 38.5 286 5-298 609-910 (1249)
67 3iz6_a 40S ribosomal protein R 100.0 6.2E-37 2.1E-41 272.3 30.1 256 2-262 99-378 (380)
68 4aez_A CDC20, WD repeat-contai 100.0 3.4E-36 1.2E-40 269.2 35.0 277 8-299 88-378 (401)
69 2xzm_R RACK1; ribosome, transl 100.0 2.4E-36 8.2E-41 264.8 33.0 247 4-260 69-341 (343)
70 4ery_A WD repeat-containing pr 100.0 6.5E-36 2.2E-40 258.2 35.3 247 2-258 56-311 (312)
71 3v7d_B Cell division control p 100.0 1.7E-35 5.8E-40 269.1 36.4 280 2-299 153-463 (464)
72 2oaj_A Protein SNI1; WD40 repe 100.0 6.8E-36 2.3E-40 292.2 34.8 286 3-297 91-659 (902)
73 2aq5_A Coronin-1A; WD40 repeat 100.0 2.4E-36 8.3E-41 270.1 28.6 252 3-301 73-344 (402)
74 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-35 4.9E-40 267.9 33.5 269 8-299 130-412 (435)
75 1gxr_A ESG1, transducin-like e 100.0 1.3E-35 4.4E-40 257.5 31.3 277 10-299 8-294 (337)
76 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.3E-35 2.2E-39 264.3 36.5 274 3-299 110-389 (445)
77 3vu4_A KMHSV2; beta-propeller 100.0 4.4E-35 1.5E-39 258.1 33.2 283 3-297 11-334 (355)
78 1pgu_A Actin interacting prote 100.0 4.1E-35 1.4E-39 274.7 33.3 287 2-300 54-365 (615)
79 3k26_A Polycomb protein EED; W 100.0 1.1E-35 3.8E-40 260.8 25.5 245 10-259 68-366 (366)
80 3jro_A Fusion protein of prote 100.0 7.7E-36 2.6E-40 287.3 26.5 250 4-300 2-284 (753)
81 4aez_A CDC20, WD repeat-contai 100.0 3.5E-34 1.2E-38 256.2 35.2 253 4-267 126-388 (401)
82 2j04_A TAU60, YPL007P, hypothe 100.0 3.5E-35 1.2E-39 267.0 27.9 271 1-298 1-296 (588)
83 4h5i_A Guanine nucleotide-exch 100.0 3.1E-35 1.1E-39 260.1 25.7 248 6-260 68-344 (365)
84 2j04_B YDR362CP, TAU91; beta p 100.0 5.4E-36 1.9E-40 276.1 21.4 243 10-299 132-426 (524)
85 3dm0_A Maltose-binding peripla 100.0 2.9E-34 9.9E-39 274.0 33.7 247 4-259 423-693 (694)
86 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-34 1.4E-38 276.8 34.7 285 2-296 46-383 (814)
87 4gga_A P55CDC, cell division c 100.0 1.5E-33 5E-38 253.7 33.7 256 6-274 142-410 (420)
88 1sq9_A Antiviral protein SKI8; 100.0 3.2E-34 1.1E-38 255.0 28.7 251 3-261 54-397 (397)
89 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-33 4.2E-38 276.3 35.2 201 8-219 14-247 (902)
90 4gq1_A NUP37; propeller, trans 100.0 2.5E-35 8.5E-40 263.2 19.6 266 9-295 87-385 (393)
91 3i2n_A WD repeat-containing pr 100.0 6.6E-34 2.2E-38 248.9 27.2 249 8-262 62-356 (357)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.3E-33 2.8E-37 251.0 35.1 278 12-299 5-391 (450)
93 2pm7_B Protein transport prote 100.0 9.3E-34 3.2E-38 243.5 27.1 216 2-259 44-285 (297)
94 4ggc_A P55CDC, cell division c 100.0 1.1E-32 3.7E-37 237.5 33.5 246 3-261 57-317 (318)
95 2xyi_A Probable histone-bindin 100.0 1.4E-33 4.7E-38 254.8 27.4 249 5-299 122-410 (430)
96 3gre_A Serine/threonine-protei 100.0 1.8E-34 6E-39 260.4 21.5 265 18-300 34-358 (437)
97 4aow_A Guanine nucleotide-bind 100.0 2.4E-32 8.3E-37 237.5 34.0 250 3-261 78-339 (340)
98 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-32 4.1E-37 236.6 31.6 246 2-265 50-302 (313)
99 3ei3_B DNA damage-binding prot 100.0 1E-32 3.5E-37 244.7 31.9 242 8-259 115-382 (383)
100 3zwl_B Eukaryotic translation 100.0 3.6E-32 1.2E-36 238.6 35.0 252 2-262 65-349 (369)
101 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-33 4.7E-38 247.2 24.4 258 18-291 43-323 (343)
102 3bws_A Protein LP49; two-domai 100.0 3.5E-32 1.2E-36 244.9 33.3 281 5-299 117-430 (433)
103 3jrp_A Fusion protein of prote 100.0 1.9E-32 6.4E-37 241.4 28.6 251 43-298 1-286 (379)
104 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-32 5.2E-37 248.1 28.4 257 2-280 164-434 (435)
105 3dwl_C Actin-related protein 2 100.0 1.2E-33 3.9E-38 250.0 20.5 241 49-297 7-279 (377)
106 1k8k_C P40, ARP2/3 complex 41 100.0 3.2E-32 1.1E-36 239.7 29.1 244 49-299 4-274 (372)
107 4e54_B DNA damage-binding prot 100.0 1.2E-32 4.1E-37 248.9 25.3 248 4-262 157-433 (435)
108 3dw8_B Serine/threonine-protei 100.0 9.8E-32 3.4E-36 242.6 30.6 247 3-258 73-445 (447)
109 2w18_A PALB2, fancn, partner a 100.0 6.1E-32 2.1E-36 231.9 26.7 243 2-298 77-354 (356)
110 1l0q_A Surface layer protein; 100.0 2.8E-30 9.5E-35 229.4 38.0 256 2-271 23-287 (391)
111 3bg1_A Protein SEC13 homolog; 100.0 6.9E-33 2.4E-37 240.2 19.8 210 3-258 49-292 (316)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 2.3E-31 7.9E-36 237.8 29.0 243 13-301 36-301 (402)
113 4a11_B DNA excision repair pro 100.0 9.1E-31 3.1E-35 232.8 31.0 278 8-295 96-401 (408)
114 2j04_A TAU60, YPL007P, hypothe 100.0 6.7E-32 2.3E-36 245.4 23.3 265 2-291 43-351 (588)
115 1l0q_A Surface layer protein; 100.0 1.3E-29 4.5E-34 225.0 36.0 262 24-299 3-273 (391)
116 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-30 4.8E-35 226.0 26.2 256 2-267 48-345 (351)
117 3vu4_A KMHSV2; beta-propeller 100.0 1E-29 3.4E-34 223.8 29.1 244 37-299 3-269 (355)
118 1yfq_A Cell cycle arrest prote 100.0 8.5E-30 2.9E-34 221.8 25.5 255 46-307 4-291 (342)
119 3mmy_A MRNA export factor; mRN 100.0 9.5E-30 3.2E-34 223.0 25.3 243 5-258 80-345 (368)
120 3jro_A Fusion protein of prote 100.0 1.2E-29 4.2E-34 244.1 24.4 216 2-259 44-285 (753)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-28 6.9E-33 222.1 29.3 237 54-297 5-337 (450)
122 4gq1_A NUP37; propeller, trans 100.0 1E-29 3.5E-34 226.8 19.8 222 4-257 129-387 (393)
123 2w18_A PALB2, fancn, partner a 100.0 1.4E-28 4.7E-33 211.1 25.3 202 10-257 110-355 (356)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 5.6E-28 1.9E-32 217.1 28.8 286 10-307 61-395 (415)
125 3bws_A Protein LP49; two-domai 100.0 1.1E-27 3.7E-32 215.4 29.9 242 6-259 164-432 (433)
126 2xyi_A Probable histone-bindin 100.0 4.5E-28 1.5E-32 218.6 26.8 210 2-260 172-411 (430)
127 3lrv_A PRE-mRNA-splicing facto 100.0 8E-28 2.7E-32 210.5 24.3 235 11-259 76-333 (343)
128 1nir_A Nitrite reductase; hemo 100.0 3.9E-26 1.3E-30 211.6 34.0 263 18-289 144-439 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.4E-27 2.2E-31 210.2 27.7 265 5-282 111-409 (415)
130 1nir_A Nitrite reductase; hemo 100.0 1.3E-25 4.3E-30 208.2 34.4 288 2-299 170-514 (543)
131 3u4y_A Uncharacterized protein 100.0 1.9E-25 6.5E-30 193.7 33.0 280 18-305 4-310 (331)
132 2ecf_A Dipeptidyl peptidase IV 100.0 1.3E-25 4.3E-30 215.5 30.8 279 11-299 36-413 (741)
133 3vgz_A Uncharacterized protein 99.9 5.5E-24 1.9E-28 185.8 34.8 268 10-288 39-331 (353)
134 2ojh_A Uncharacterized protein 99.9 9.5E-25 3.2E-29 185.1 25.5 254 27-291 16-292 (297)
135 1k32_A Tricorn protease; prote 99.9 1.2E-23 3.9E-28 209.3 31.9 278 4-290 45-440 (1045)
136 1pby_B Quinohemoprotein amine 99.9 1.2E-23 4.2E-28 182.1 28.2 263 24-299 2-308 (337)
137 1ri6_A Putative isomerase YBHE 99.9 5.8E-23 2E-27 178.3 32.2 270 24-299 6-308 (343)
138 1ri6_A Putative isomerase YBHE 99.9 6E-23 2.1E-27 178.2 31.9 265 9-283 35-335 (343)
139 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-24 4E-29 208.2 22.3 280 12-300 17-394 (723)
140 2ecf_A Dipeptidyl peptidase IV 99.9 7.7E-24 2.6E-28 203.1 27.6 265 13-290 110-444 (741)
141 3o4h_A Acylamino-acid-releasin 99.9 4.6E-24 1.6E-28 199.5 24.8 270 11-300 21-314 (582)
142 2z3z_A Dipeptidyl aminopeptida 99.9 3.3E-23 1.1E-27 197.7 29.4 266 12-290 82-420 (706)
143 3u4y_A Uncharacterized protein 99.9 1E-21 3.5E-26 170.1 35.1 275 3-282 32-326 (331)
144 2z3z_A Dipeptidyl aminopeptida 99.9 1.4E-23 5E-28 200.2 25.5 274 14-300 28-390 (706)
145 1pby_B Quinohemoprotein amine 99.9 4.9E-23 1.7E-27 178.3 26.0 245 13-269 35-320 (337)
146 3hfq_A Uncharacterized protein 99.9 5.9E-22 2E-26 173.1 33.0 266 31-299 14-317 (347)
147 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-23 1.1E-27 198.3 26.5 275 4-288 50-427 (723)
148 1k32_A Tricorn protease; prote 99.9 2.7E-23 9.2E-28 206.7 26.7 269 5-291 197-492 (1045)
149 3hfq_A Uncharacterized protein 99.9 1.3E-21 4.6E-26 170.8 29.2 248 9-263 37-323 (347)
150 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-21 3.8E-26 170.7 28.0 242 16-269 4-335 (349)
151 3pe7_A Oligogalacturonate lyas 99.9 4.8E-22 1.6E-26 176.0 25.7 288 4-300 23-383 (388)
152 2ojh_A Uncharacterized protein 99.9 9.1E-22 3.1E-26 166.6 24.8 238 5-250 35-293 (297)
153 3scy_A Hypothetical bacterial 99.9 7.4E-20 2.5E-24 160.7 34.5 276 20-299 10-337 (361)
154 2oit_A Nucleoporin 214KDA; NH2 99.9 5.3E-22 1.8E-26 179.1 21.2 206 10-260 35-279 (434)
155 3scy_A Hypothetical bacterial 99.9 4.3E-20 1.5E-24 162.2 30.3 264 10-279 48-360 (361)
156 3vgz_A Uncharacterized protein 99.9 5.6E-20 1.9E-24 160.2 30.5 238 55-299 42-301 (353)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 3.6E-20 1.2E-24 163.3 26.6 252 11-302 39-344 (365)
158 2oiz_A Aromatic amine dehydrog 99.9 9.1E-20 3.1E-24 160.6 29.1 270 3-283 43-360 (361)
159 1z68_A Fibroblast activation p 99.9 2.5E-21 8.5E-26 185.2 19.7 279 16-299 20-391 (719)
160 3c5m_A Oligogalacturonate lyas 99.9 4.7E-20 1.6E-24 163.3 22.1 282 4-300 23-383 (396)
161 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-18 3.8E-23 151.7 28.2 230 59-300 5-324 (349)
162 3fvz_A Peptidyl-glycine alpha- 99.8 1.3E-18 4.4E-23 151.2 27.5 252 12-301 24-322 (329)
163 4a5s_A Dipeptidyl peptidase 4 99.8 4.4E-20 1.5E-24 177.4 19.9 275 10-299 15-351 (740)
164 3o4h_A Acylamino-acid-releasin 99.8 2.7E-20 9.2E-25 174.0 16.9 236 46-297 13-274 (582)
165 1z68_A Fibroblast activation p 99.8 2.5E-19 8.5E-24 171.4 23.0 263 13-287 61-426 (719)
166 2oit_A Nucleoporin 214KDA; NH2 99.8 3E-19 1E-23 161.1 21.8 199 10-212 91-331 (434)
167 3azo_A Aminopeptidase; POP fam 99.8 3.4E-18 1.2E-22 161.9 27.8 289 6-299 18-367 (662)
168 2oiz_A Aromatic amine dehydrog 99.8 1.3E-17 4.3E-22 146.9 27.2 272 21-299 13-334 (361)
169 1q7f_A NHL, brain tumor CG1071 99.8 1E-16 3.5E-21 136.0 30.9 243 9-261 27-282 (286)
170 3pe7_A Oligogalacturonate lyas 99.8 1.8E-18 6.3E-23 152.9 19.7 244 36-287 13-306 (388)
171 2dg1_A DRP35, lactonase; beta 99.8 5.3E-17 1.8E-21 140.7 27.4 277 11-299 5-314 (333)
172 2gop_A Trilobed protease; beta 99.8 9.7E-17 3.3E-21 139.7 27.1 264 12-305 15-336 (347)
173 3e5z_A Putative gluconolactona 99.8 1E-15 3.4E-20 130.6 31.2 259 5-303 21-290 (296)
174 2bkl_A Prolyl endopeptidase; m 99.8 6.7E-17 2.3E-21 154.1 24.6 250 9-262 118-400 (695)
175 3dsm_A Uncharacterized protein 99.8 6.4E-16 2.2E-20 134.2 28.4 254 31-299 15-302 (328)
176 2xdw_A Prolyl endopeptidase; a 99.8 7E-16 2.4E-20 147.5 29.7 249 9-261 122-416 (710)
177 2z2n_A Virginiamycin B lyase; 99.7 1.3E-13 4.4E-18 116.9 37.5 276 7-299 10-295 (299)
178 3no2_A Uncharacterized protein 99.7 2.4E-15 8.4E-20 127.3 26.3 218 22-288 4-230 (276)
179 3c5m_A Oligogalacturonate lyas 99.7 1.2E-16 4.1E-21 141.3 18.2 243 37-289 14-301 (396)
180 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.9E-15 6.3E-20 133.1 25.6 213 13-260 84-342 (365)
181 4a5s_A Dipeptidyl peptidase 4 99.7 7.5E-16 2.6E-20 147.9 24.6 273 5-289 50-434 (740)
182 1q7f_A NHL, brain tumor CG1071 99.7 1.9E-14 6.5E-19 121.9 29.2 231 55-297 31-278 (286)
183 2dg1_A DRP35, lactonase; beta 99.7 1.1E-13 3.6E-18 119.8 33.6 243 5-250 38-301 (333)
184 1rwi_B Serine/threonine-protei 99.7 2.8E-14 9.6E-19 119.6 26.7 237 13-299 25-262 (270)
185 1qks_A Cytochrome CD1 nitrite 99.7 1.7E-13 5.8E-18 127.0 34.1 259 20-287 164-456 (567)
186 3azo_A Aminopeptidase; POP fam 99.7 9.9E-15 3.4E-19 138.1 25.4 247 10-297 128-409 (662)
187 3sjl_D Methylamine dehydrogena 99.7 6.9E-14 2.4E-18 122.7 28.1 257 16-281 82-384 (386)
188 3fvz_A Peptidyl-glycine alpha- 99.7 2.2E-14 7.4E-19 124.5 24.8 206 10-259 89-322 (329)
189 2mad_H Methylamine dehydrogena 99.7 6.9E-13 2.4E-17 117.0 34.7 277 17-300 26-349 (373)
190 2mad_H Methylamine dehydrogena 99.7 8.9E-13 3E-17 116.3 35.1 241 16-267 70-358 (373)
191 2gop_A Trilobed protease; beta 99.7 3.4E-14 1.2E-18 123.5 25.6 238 12-273 59-343 (347)
192 2qc5_A Streptogramin B lactona 99.7 5.6E-12 1.9E-16 106.8 37.4 274 9-298 17-297 (300)
193 2xdw_A Prolyl endopeptidase; a 99.6 1.8E-13 6.2E-18 130.8 29.3 273 21-299 81-412 (710)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5E-13 1.7E-17 114.4 28.0 239 11-298 17-298 (314)
195 1yr2_A Prolyl oligopeptidase; 99.6 5.6E-14 1.9E-18 135.0 24.2 245 10-261 161-443 (741)
196 3dsm_A Uncharacterized protein 99.6 6E-13 2E-17 115.4 28.3 242 13-267 45-309 (328)
197 1qks_A Cytochrome CD1 nitrite 99.6 7.7E-12 2.6E-16 116.0 35.0 275 3-286 189-518 (567)
198 3e5z_A Putative gluconolactona 99.6 7.5E-13 2.6E-17 112.7 25.8 214 44-305 18-252 (296)
199 3hrp_A Uncharacterized protein 99.6 7.5E-12 2.6E-16 111.8 29.8 242 13-297 132-406 (409)
200 3c75_H MADH, methylamine dehyd 99.6 1.8E-12 6.2E-17 115.5 25.5 257 16-282 122-424 (426)
201 3sjl_D Methylamine dehydrogena 99.6 2.1E-12 7E-17 113.3 25.2 275 17-297 38-361 (386)
202 3g4e_A Regucalcin; six bladed 99.5 2E-11 6.7E-16 104.2 29.5 235 5-289 6-261 (297)
203 2bkl_A Prolyl endopeptidase; m 99.5 1.4E-12 4.9E-17 124.3 24.4 270 20-299 76-395 (695)
204 1mda_H Methylamine dehydrogena 99.5 6.7E-13 2.3E-17 116.4 19.8 262 2-280 57-366 (368)
205 3c75_H MADH, methylamine dehyd 99.5 5.4E-12 1.8E-16 112.5 23.8 273 21-297 82-400 (426)
206 3no2_A Uncharacterized protein 99.5 5.5E-12 1.9E-16 106.6 22.9 173 76-296 13-190 (276)
207 3iuj_A Prolyl endopeptidase; h 99.5 5.2E-12 1.8E-16 120.4 24.7 245 9-262 126-408 (693)
208 1yr2_A Prolyl oligopeptidase; 99.5 1.6E-11 5.5E-16 117.9 26.4 272 20-299 115-439 (741)
209 2z2n_A Virginiamycin B lyase; 99.5 4.5E-10 1.5E-14 94.9 32.5 235 10-260 55-296 (299)
210 1rwi_B Serine/threonine-protei 99.5 1E-11 3.5E-16 103.8 21.3 200 12-262 67-267 (270)
211 3dr2_A Exported gluconolactona 99.5 1.7E-10 5.9E-15 98.6 29.5 246 6-290 39-297 (305)
212 2qe8_A Uncharacterized protein 99.4 1.3E-11 4.5E-16 107.5 20.8 257 12-290 17-310 (343)
213 1xip_A Nucleoporin NUP159; bet 99.4 1.1E-11 3.9E-16 109.0 19.8 174 13-245 39-230 (388)
214 2ghs_A AGR_C_1268P; regucalcin 99.4 7.4E-10 2.5E-14 95.7 29.2 224 14-289 51-291 (326)
215 1mda_H Methylamine dehydrogena 99.4 3.6E-11 1.2E-15 105.4 18.9 263 24-299 33-344 (368)
216 1xip_A Nucleoporin NUP159; bet 99.4 2E-11 6.9E-16 107.4 16.3 172 100-289 39-232 (388)
217 2qc5_A Streptogramin B lactona 99.4 9.1E-09 3.1E-13 86.8 32.2 233 10-258 60-299 (300)
218 2hz6_A Endoplasmic reticulum t 99.4 4.6E-13 1.6E-17 118.1 5.4 205 22-284 8-217 (369)
219 3g4e_A Regucalcin; six bladed 99.3 2.6E-09 9.1E-14 90.9 25.1 196 10-248 52-261 (297)
220 1yiq_A Quinohemoprotein alcoho 99.3 1.4E-09 4.9E-14 103.3 25.5 260 23-287 121-534 (689)
221 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2.7E-09 9.2E-14 90.9 25.0 205 10-259 69-299 (314)
222 1kb0_A Quinohemoprotein alcoho 99.2 2.4E-09 8.2E-14 101.6 24.0 259 22-287 127-536 (677)
223 3iuj_A Prolyl endopeptidase; h 99.2 1.7E-09 5.9E-14 103.0 22.8 233 53-299 128-403 (693)
224 2qe8_A Uncharacterized protein 99.2 5.1E-10 1.8E-14 97.4 17.0 230 9-255 64-317 (343)
225 2iwa_A Glutamine cyclotransfer 99.2 3.6E-09 1.2E-13 88.0 20.1 213 2-260 10-238 (266)
226 1kb0_A Quinohemoprotein alcoho 99.2 6.3E-09 2.1E-13 98.7 24.4 268 23-299 77-505 (677)
227 3dr2_A Exported gluconolactona 99.2 5.3E-09 1.8E-13 89.3 20.8 204 90-305 36-273 (305)
228 3hxj_A Pyrrolo-quinoline quino 99.2 1.8E-08 6E-13 86.5 23.8 259 11-295 59-320 (330)
229 3hrp_A Uncharacterized protein 99.2 6.1E-07 2.1E-11 79.9 34.4 195 98-298 130-351 (409)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.4E-07 4.9E-12 82.7 29.7 227 23-268 103-346 (376)
231 2ece_A 462AA long hypothetical 99.1 1.2E-07 4E-12 84.2 28.6 222 63-289 93-399 (462)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.1 5E-08 1.7E-12 85.6 26.0 229 23-267 53-304 (376)
233 3nol_A Glutamine cyclotransfer 99.1 1.4E-08 4.8E-13 83.7 19.9 200 2-248 32-244 (262)
234 2ece_A 462AA long hypothetical 99.1 1.6E-07 5.4E-12 83.3 27.5 226 21-247 93-399 (462)
235 1yiq_A Quinohemoprotein alcoho 99.1 3.5E-08 1.2E-12 93.8 25.1 269 23-299 70-503 (689)
236 3hxj_A Pyrrolo-quinoline quino 99.1 6.9E-09 2.3E-13 89.0 17.2 258 14-297 22-282 (330)
237 2ghs_A AGR_C_1268P; regucalcin 99.1 1.5E-07 5E-12 81.2 25.1 193 11-248 89-291 (326)
238 1fwx_A Nitrous oxide reductase 99.0 4.3E-08 1.5E-12 89.8 22.0 239 21-261 99-433 (595)
239 1npe_A Nidogen, entactin; glyc 99.0 3E-06 1E-10 70.5 31.6 248 24-283 2-263 (267)
240 3nok_A Glutaminyl cyclase; bet 99.0 9.1E-08 3.1E-12 78.9 21.1 198 2-247 44-253 (268)
241 1fwx_A Nitrous oxide reductase 99.0 1E-07 3.4E-12 87.4 23.1 256 26-290 18-407 (595)
242 2iwa_A Glutamine cyclotransfer 99.0 1.1E-07 3.9E-12 79.0 19.4 194 100-301 22-237 (266)
243 1k3i_A Galactose oxidase precu 99.0 3.3E-07 1.1E-11 86.7 25.1 270 16-290 190-530 (656)
244 3mbr_X Glutamine cyclotransfer 98.9 6.5E-07 2.2E-11 73.1 22.8 200 2-248 10-223 (243)
245 2fp8_A Strictosidine synthase; 98.9 5.3E-06 1.8E-10 71.1 29.5 237 13-259 20-313 (322)
246 4a2l_A BT_4663, two-component 98.9 8.3E-06 2.8E-10 78.7 34.0 274 14-299 175-480 (795)
247 3nol_A Glutamine cyclotransfer 98.9 2.8E-07 9.6E-12 76.0 19.1 187 101-297 45-252 (262)
248 3nok_A Glutaminyl cyclase; bet 98.9 4.7E-07 1.6E-11 74.7 20.4 189 100-298 56-263 (268)
249 1kv9_A Type II quinohemoprotei 98.9 2E-06 6.8E-11 81.4 26.6 259 23-286 117-516 (668)
250 2hz6_A Endoplasmic reticulum t 98.8 1.3E-09 4.5E-14 95.8 4.3 227 12-258 38-278 (369)
251 4a2l_A BT_4663, two-component 98.8 2.6E-05 9.1E-10 75.2 34.3 271 11-298 356-658 (795)
252 2p4o_A Hypothetical protein; p 98.8 4E-05 1.4E-09 65.1 30.1 236 4-250 25-279 (306)
253 3mbr_X Glutamine cyclotransfer 98.8 1.8E-06 6.3E-11 70.4 20.2 189 100-298 22-232 (243)
254 1npe_A Nidogen, entactin; glyc 98.8 2.9E-05 9.9E-10 64.5 28.3 220 12-241 36-263 (267)
255 1kv9_A Type II quinohemoprotei 98.7 2.8E-06 9.7E-11 80.4 23.4 191 23-221 66-340 (668)
256 2ad6_A Methanol dehydrogenase 98.7 2.6E-05 8.9E-10 72.4 28.5 193 23-223 62-344 (571)
257 2ad6_A Methanol dehydrogenase 98.7 8.6E-06 3E-10 75.6 24.5 259 23-289 115-525 (571)
258 1w6s_A Methanol dehydrogenase 98.6 6.5E-05 2.2E-09 69.9 29.1 194 23-222 62-350 (599)
259 1w6s_A Methanol dehydrogenase 98.6 6.4E-05 2.2E-09 70.0 28.5 252 26-285 124-530 (599)
260 3v9f_A Two-component system se 98.6 0.00012 4E-09 70.5 31.4 275 12-298 211-523 (781)
261 1flg_A Protein (quinoprotein e 98.6 0.00015 5.2E-09 67.3 31.0 259 23-287 117-545 (582)
262 3v9f_A Two-component system se 98.6 0.00016 5.6E-09 69.5 32.3 274 11-299 312-611 (781)
263 2p4o_A Hypothetical protein; p 98.6 0.00014 4.8E-09 61.7 27.1 219 55-288 33-276 (306)
264 2fp8_A Strictosidine synthase; 98.6 6.1E-05 2.1E-09 64.4 24.8 227 56-298 21-310 (322)
265 4hw6_A Hypothetical protein, I 98.4 0.00074 2.5E-08 60.3 27.5 240 14-258 141-432 (433)
266 1flg_A Protein (quinoprotein e 98.4 0.001 3.5E-08 61.7 29.3 108 24-136 69-200 (582)
267 2xe4_A Oligopeptidase B; hydro 98.4 0.00011 3.7E-09 70.5 23.1 115 13-130 175-305 (751)
268 3v65_B Low-density lipoprotein 98.3 0.0014 4.8E-08 57.6 29.5 255 15-282 80-342 (386)
269 3tc9_A Hypothetical hydrolase; 98.3 0.00085 2.9E-08 59.9 25.5 242 13-258 138-429 (430)
270 3v64_C Agrin; beta propeller, 98.3 0.0018 6E-08 56.1 31.0 257 12-281 34-298 (349)
271 1k3i_A Galactose oxidase precu 98.1 0.00011 3.9E-09 69.3 17.1 230 58-290 190-475 (656)
272 3tc9_A Hypothetical hydrolase; 98.1 0.0054 1.8E-07 54.7 26.6 230 56-295 139-424 (430)
273 1ijq_A LDL receptor, low-densi 98.0 0.0044 1.5E-07 52.7 31.5 227 32-267 9-246 (316)
274 3qqz_A Putative uncharacterize 98.0 0.0036 1.2E-07 51.5 26.5 215 5-258 20-252 (255)
275 3m0c_C LDL receptor, low-densi 98.0 0.013 4.4E-07 56.3 29.4 210 11-267 423-640 (791)
276 3p5b_L Low density lipoprotein 98.0 0.0073 2.5E-07 53.3 31.1 228 31-267 90-328 (400)
277 1n7d_A LDL receptor, low-densi 98.0 0.00017 5.9E-09 68.5 15.7 238 31-277 384-632 (699)
278 4hw6_A Hypothetical protein, I 98.0 0.0087 3E-07 53.4 26.9 235 56-298 141-430 (433)
279 2xe4_A Oligopeptidase B; hydro 97.9 0.0018 6.1E-08 62.1 20.4 193 100-298 175-397 (751)
280 3v64_C Agrin; beta propeller, 97.8 0.012 4.3E-07 50.7 28.1 203 13-222 74-283 (349)
281 3qqz_A Putative uncharacterize 97.8 0.0096 3.3E-07 48.9 23.9 201 93-296 21-248 (255)
282 3v65_B Low-density lipoprotein 97.8 0.015 5E-07 51.0 27.0 203 13-222 117-326 (386)
283 1ijq_A LDL receptor, low-densi 97.7 0.016 5.6E-07 49.1 27.7 205 12-221 30-245 (316)
284 3amr_A 3-phytase; beta-propell 97.7 0.018 6.2E-07 49.4 23.8 197 22-223 39-273 (355)
285 3sov_A LRP-6, low-density lipo 97.7 0.02 6.8E-07 48.7 29.1 226 32-267 12-246 (318)
286 2xbg_A YCF48-like protein; pho 97.7 0.021 7.2E-07 48.7 31.2 267 11-296 35-317 (327)
287 3kya_A Putative phosphatase; s 97.7 0.032 1.1E-06 50.4 24.5 248 14-264 141-480 (496)
288 3ei3_A DNA damage-binding prot 97.6 0.087 3E-06 52.8 31.9 277 11-300 553-914 (1158)
289 3p5b_L Low density lipoprotein 97.5 0.046 1.6E-06 48.1 27.2 207 11-222 111-328 (400)
290 2p9w_A MAL S 1 allergenic prot 97.4 0.018 6.1E-07 49.0 18.2 154 103-260 17-216 (334)
291 3pbp_A Nucleoporin NUP82; beta 97.4 0.04 1.4E-06 48.4 20.5 136 155-294 37-207 (452)
292 1n7d_A LDL receptor, low-densi 97.4 0.0024 8.3E-08 60.6 14.0 205 13-222 407-622 (699)
293 2xbg_A YCF48-like protein; pho 97.3 0.059 2E-06 45.9 27.1 234 11-257 79-320 (327)
294 3amr_A 3-phytase; beta-propell 97.3 0.043 1.5E-06 47.1 18.7 185 110-300 40-262 (355)
295 4a0p_A LRP6, LRP-6, low-densit 97.2 0.14 4.6E-06 47.9 28.2 200 13-263 38-241 (628)
296 3sre_A PON1, serum paraoxonase 97.2 0.087 3E-06 45.5 21.2 179 103-289 54-285 (355)
297 3kya_A Putative phosphatase; s 97.1 0.15 5.1E-06 46.0 27.7 237 57-298 142-472 (496)
298 2ism_A Putative oxidoreductase 97.1 0.11 3.9E-06 44.6 27.3 227 13-247 32-333 (352)
299 2g8s_A Glucose/sorbosone dehyd 97.1 0.12 4.2E-06 44.4 24.7 231 13-246 19-340 (353)
300 3s94_A LRP-6, low-density lipo 97.0 0.25 8.5E-06 46.1 29.5 225 31-265 16-249 (619)
301 3sre_A PON1, serum paraoxonase 96.9 0.16 5.6E-06 43.7 22.2 207 14-257 52-296 (355)
302 3a9g_A Putative uncharacterize 96.9 0.17 5.7E-06 43.6 28.3 234 12-247 29-330 (354)
303 3m0c_C LDL receptor, low-densi 96.9 0.35 1.2E-05 46.5 28.6 181 31-260 402-590 (791)
304 3sov_A LRP-6, low-density lipo 96.6 0.26 9.1E-06 41.7 29.1 196 77-281 12-219 (318)
305 3pbp_A Nucleoporin NUP82; beta 96.6 0.33 1.1E-05 42.7 18.5 103 22-129 31-158 (452)
306 2ism_A Putative oxidoreductase 96.5 0.045 1.6E-06 47.2 13.1 103 184-289 31-153 (352)
307 2vpj_A Kelch-like protein 12; 96.5 0.29 9.9E-06 40.6 21.2 228 22-261 14-280 (301)
308 3das_A Putative oxidoreductase 96.4 0.41 1.4E-05 41.1 21.4 39 93-131 26-64 (347)
309 1cru_A Protein (soluble quinop 96.3 0.38 1.3E-05 42.9 18.3 33 98-130 26-58 (454)
310 2xzh_A Clathrin heavy chain 1; 96.3 0.44 1.5E-05 40.5 28.6 228 18-258 73-331 (365)
311 3s94_A LRP-6, low-density lipo 96.2 0.82 2.8E-05 42.6 31.9 119 12-131 84-204 (619)
312 3a9g_A Putative uncharacterize 96.1 0.11 3.7E-06 44.8 13.3 104 184-289 29-153 (354)
313 2g8s_A Glucose/sorbosone dehyd 96.1 0.55 1.9E-05 40.3 17.5 29 98-127 17-46 (353)
314 2p9w_A MAL S 1 allergenic prot 96.0 0.61 2.1E-05 39.6 26.9 216 7-261 8-267 (334)
315 2xn4_A Kelch-like protein 2; s 95.8 0.66 2.3E-05 38.4 22.1 228 23-261 16-278 (302)
316 3ii7_A Kelch-like protein 7; p 95.7 0.74 2.5E-05 38.2 24.7 229 23-261 12-274 (306)
317 1zgk_A Kelch-like ECH-associat 95.7 0.76 2.6E-05 38.3 19.6 229 21-261 23-289 (308)
318 4a0p_A LRP6, LRP-6, low-densit 95.7 1.4 4.7E-05 41.1 34.0 278 12-297 123-461 (628)
319 2vpj_A Kelch-like protein 12; 95.4 0.96 3.3E-05 37.4 21.9 172 109-290 62-262 (301)
320 1cru_A Protein (soluble quinop 95.2 0.38 1.3E-05 42.9 13.4 106 184-289 27-162 (454)
321 1xi4_A Clathrin heavy chain; a 95.1 1.5 5.1E-05 44.7 18.1 193 19-221 73-296 (1630)
322 1bpo_A Protein (clathrin); cla 95.0 1.8 6.3E-05 38.3 26.9 120 77-202 47-169 (494)
323 1bpo_A Protein (clathrin); cla 94.9 1.9 6.6E-05 38.1 30.8 229 18-259 72-331 (494)
324 1tl2_A L10, protein (tachylect 94.8 0.5 1.7E-05 37.7 11.4 99 184-288 41-152 (236)
325 2uvk_A YJHT; unknown function, 94.7 1.8 6E-05 36.8 18.3 72 191-265 249-348 (357)
326 2xn4_A Kelch-like protein 2; s 94.5 1.7 6E-05 35.8 20.6 172 109-290 61-260 (302)
327 4asc_A Kelch repeat and BTB do 94.4 1.8 6.3E-05 36.0 21.2 226 25-262 7-280 (315)
328 2zwa_A Leucine carboxyl methyl 94.4 3.5 0.00012 38.9 21.3 112 21-132 396-525 (695)
329 3ii7_A Kelch-like protein 7; p 93.8 2.5 8.4E-05 35.0 21.4 202 77-290 23-256 (306)
330 1zgk_A Kelch-like ECH-associat 93.6 2.7 9.2E-05 34.8 18.8 172 109-290 70-271 (308)
331 2be1_A Serine/threonine-protei 93.5 0.56 1.9E-05 40.1 10.1 181 77-264 19-236 (339)
332 3ei3_A DNA damage-binding prot 93.3 7.5 0.00026 39.1 30.7 248 33-295 492-761 (1158)
333 3ott_A Two-component system se 91.5 9.5 0.00032 36.1 31.0 269 12-297 146-446 (758)
334 1xi4_A Clathrin heavy chain; a 91.1 15 0.00052 37.7 20.0 216 32-264 47-294 (1630)
335 2xzh_A Clathrin heavy chain 1; 90.9 6.8 0.00023 33.3 28.7 216 31-266 47-297 (365)
336 1tl2_A L10, protein (tachylect 90.4 5.7 0.00019 31.7 14.5 174 23-208 4-204 (236)
337 3das_A Putative oxidoreductase 90.1 8.2 0.00028 32.9 28.2 230 12-246 32-325 (347)
338 2wg3_C Hedgehog-interacting pr 89.6 2.4 8.2E-05 37.9 10.3 103 186-290 16-158 (463)
339 3ott_A Two-component system se 89.6 14 0.00048 34.9 33.7 260 13-286 192-487 (758)
340 4gq2_M Nucleoporin NUP120; bet 89.6 1.7 5.8E-05 42.7 10.0 38 13-50 237-274 (950)
341 3sbq_A Nitrous-oxide reductase 88.9 1.3 4.5E-05 40.4 7.8 73 187-259 326-408 (638)
342 2woz_A Kelch repeat and BTB do 88.9 8.9 0.00031 31.7 21.2 226 24-262 17-290 (318)
343 2uvk_A YJHT; unknown function, 87.4 12 0.00041 31.5 20.1 94 194-290 200-325 (357)
344 2be1_A Serine/threonine-protei 86.1 15 0.00051 31.2 23.0 115 24-139 11-140 (339)
345 4asc_A Kelch repeat and BTB do 85.3 14 0.00049 30.3 22.8 203 78-290 13-252 (315)
346 3sbq_A Nitrous-oxide reductase 84.2 8.4 0.00029 35.3 10.4 116 144-259 328-478 (638)
347 3f7f_A Nucleoporin NUP120; nuc 82.8 1.9 6.7E-05 40.5 6.0 39 11-51 221-259 (729)
348 4gq2_M Nucleoporin NUP120; bet 82.3 6 0.0002 38.8 9.5 38 229-266 236-273 (950)
349 2wg3_C Hedgehog-interacting pr 81.6 28 0.00096 30.9 13.1 106 13-120 15-160 (463)
350 4fhn_B Nucleoporin NUP120; pro 81.1 8.1 0.00028 38.7 10.2 38 229-266 238-275 (1139)
351 4hvt_A Ritya.17583.B, post-pro 80.9 38 0.0013 32.0 18.0 234 59-299 135-428 (711)
352 4fhn_B Nucleoporin NUP120; pro 80.6 1.3 4.4E-05 44.5 4.2 38 13-50 239-276 (1139)
353 2woz_A Kelch repeat and BTB do 77.7 28 0.00096 28.6 21.3 202 79-290 25-262 (318)
354 4hvt_A Ritya.17583.B, post-pro 74.9 57 0.002 30.7 24.4 240 13-258 130-429 (711)
355 2zwa_A Leucine carboxyl methyl 72.6 63 0.0022 30.2 17.5 150 108-261 396-579 (695)
356 3qhy_B Beta-lactamase inhibito 63.3 60 0.002 26.4 14.5 201 77-295 41-242 (282)
357 3zwu_A Alkaline phosphatase PH 61.6 33 0.0011 31.6 8.5 58 187-246 479-548 (592)
358 3f7f_A Nucleoporin NUP120; nuc 60.9 8.3 0.00028 36.3 4.5 31 237-267 228-258 (729)
359 3s25_A Hypothetical 7-bladed b 60.8 70 0.0024 26.4 20.7 98 189-298 150-252 (302)
360 4a9v_A PHOX; hydrolase, beta-p 59.6 50 0.0017 30.3 9.2 61 184-246 476-548 (592)
361 3qhy_B Beta-lactamase inhibito 57.6 76 0.0026 25.8 20.5 246 13-288 25-271 (282)
362 3zwu_A Alkaline phosphatase PH 43.8 1.1E+02 0.0036 28.2 8.9 60 57-116 479-548 (592)
363 4a9v_A PHOX; hydrolase, beta-p 38.5 87 0.003 28.7 7.3 55 231-285 478-545 (592)
364 1b2p_A Protein (lectin); manno 33.9 1.2E+02 0.004 21.0 7.1 45 242-287 63-108 (119)
365 3izo_F Fiber; pentameric pento 31.2 2.1E+02 0.0073 26.1 8.5 105 16-132 380-485 (581)
366 4h3o_A Lectin; cadmium, plant 29.5 1.3E+02 0.0044 20.2 6.5 44 244-288 55-99 (105)
367 3al9_A Plexin-A2; beta-propell 21.5 2.8E+02 0.0094 25.1 7.6 58 196-254 414-476 (539)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-48 Score=349.04 Aligned_cols=286 Identities=17% Similarity=0.284 Sum_probs=251.9
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
...+.+|.++|++++|+|++++|+||+.|++|+|||+.++++++++.+|...|..++|+++++.+++++. |++|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~---D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA---DMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET---TSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC---CCeEEEE
Confidence 4578899999999999999999999999999999999999999999999999999999999998888764 8899999
Q ss_pred EccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEE-EEECCE
Q 021669 84 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA-VAFGGY 160 (309)
Q Consensus 84 d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~ 160 (309)
|+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++.+...+..+. .....+.+++.+++ ++.|+.
T Consensus 178 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 178 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 999999999999999999999999999999999999999999999998877665433 23456667766555 456899
Q ss_pred EEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC--------------------CCEEEEEeCCCcEEEEECCCCeEeEE
Q 021669 161 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSND--------------------GRLMLLTTMEGHIHVLDSFRGTLLST 220 (309)
Q Consensus 161 i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d--------------------g~~l~~~~~dg~v~i~d~~~~~~~~~ 220 (309)
|++||++..+ ....+.++...+.+++|+|+ |.++++++.|++|++||+.++..+..
T Consensus 258 v~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 258 VRVWVVATKE----CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp EEEEETTTCC----EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCc----eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 9999987643 23455667788999999996 67899999999999999999998887
Q ss_pred eeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 221 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 221 ~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
+. .|...+.+++|+|+|++|++|+.|++|++||+.+++.+.++.+|...|++++|+|++++|++|+.|..+.+|++
T Consensus 334 ~~---~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 334 LV---GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EE---CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EE---CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 75 35677889999999999999999999999999999999999999999999999999999999999966555553
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-47 Score=330.74 Aligned_cols=288 Identities=17% Similarity=0.250 Sum_probs=244.7
Q ss_pred CccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 1 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 1 ~~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
+++.++|++|+++|.+++|+|++++|+||+.|++|+|||+.++++++.+..|..++..++|+++++.+++++. |++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i 79 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRI 79 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC---CCEE
Confidence 3567899999999999999999999999999999999999999999999999999999999999999998875 8899
Q ss_pred EEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCcee-eeeeeecC--ceeEEECC-CCc-EEEE
Q 021669 81 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLLRVQG--RPAAAYDD-QGL-VFAV 155 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~-~~~~~~~~--~~~~~~~~-~~~-~~~~ 155 (309)
++||+++++.+..+.+|.+.|++++|+|++++|+||+.|++|++||++++.. ...+..+. ...+.+.| ++. ++++
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999987633 33333222 23456766 444 5556
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc--CCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~--dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
+.|+.|++||++.... . .....++...+..+.++| ++.++++++.|++|++||+.+++++.++.. |...+..
T Consensus 160 s~D~~v~iwd~~~~~~-~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~---h~~~v~~ 233 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTP-N--FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---HMSNVSF 233 (304)
T ss_dssp ETTSEEEEEETTCSSC-S--EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC---CSSCEEE
T ss_pred eCCCeEEEEECCCCCc-c--ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC---CCCCEEE
Confidence 6799999999876432 1 122234446788888876 788999999999999999999998887763 5677889
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCee--EEEEccce-EEEeee
Q 021669 234 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL--MFVTGSSE-LSFWIP 297 (309)
Q Consensus 234 ~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~--~l~s~~~d-~~~~~~ 297 (309)
++|+|++++|++|+.||+|++||+.+++.+.++..|...+.+++|+|++. ++++|+.+ ..+|..
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEEC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEe
Confidence 99999999999999999999999999999999999999999999999874 58888776 444543
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.3e-47 Score=332.32 Aligned_cols=287 Identities=17% Similarity=0.206 Sum_probs=246.4
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
+..++|++|.++|.+++|+|++++|+||+.|++|+|||+.+++++..+..|...+..++|+|+++.+++++. |+.++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---d~~v~ 122 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL---DNICS 122 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEET---TCEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeC---CCeEE
Confidence 345789999999999999999999999999999999999999999999999999999999999999988764 88999
Q ss_pred EEEccCCc----eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEE-
Q 021669 82 LLSLHDNK----YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA- 154 (309)
Q Consensus 82 ~~d~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 154 (309)
+||+.+++ ....+.+|.+.|.++.|++++ .+++++.|++|++||++++++...+..+. ...+.+.+++.+++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 99997753 466788999999999999876 48999999999999999988776664332 34566777776555
Q ss_pred EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceE
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 234 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
++.|+.|++||++... ....+.++...+.+++|+|+++++++++.||+|++||++++..+..+.. ..+...+.++
T Consensus 202 g~~d~~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~ 276 (340)
T 1got_B 202 GACDASAKLWDVREGM----CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSV 276 (340)
T ss_dssp EETTSCEEEEETTTCS----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-TTCCSCEEEE
T ss_pred EeCCCcEEEEECCCCe----eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc-CCcccceEEE
Confidence 4568999999997643 2445667788899999999999999999999999999999887766542 2233467889
Q ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeee
Q 021669 235 SFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 297 (309)
Q Consensus 235 ~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~ 297 (309)
+|+|+|++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|..+.+|
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred EECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 999999999999999999999999999999999999999999999999999999998444433
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-47 Score=330.80 Aligned_cols=285 Identities=20% Similarity=0.267 Sum_probs=245.6
Q ss_pred ceEecCCCcceEEEEeCCC----CCEEEEeeCCCcEEEEEcCCCce--eeeeeccccceeEEEEecCCCEEEEEcCCCCC
Q 021669 4 GMSFRDYNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 77 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~----~~~l~t~s~D~~v~iWd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d 77 (309)
.+++++|+++|.+++|+|+ +.+|+|||.|++|||||+.+++. ...+.+|...|..+++++++..+++++. |
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~---D 101 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL---D 101 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET---T
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC---C
Confidence 4667899999999999975 57999999999999999976654 4568899999999999999998888764 8
Q ss_pred ceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEE
Q 021669 78 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAV 155 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 155 (309)
++|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.+++||+++++....+.... .....+.+++.++++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999887765554433 235677888776665
Q ss_pred E-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceE
Q 021669 156 A-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 234 (309)
Q Consensus 156 ~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
+ .|+.|++||++..+ .+..+.++...+.+++|+|++++|++++.|+.|++||+.+++....+. .|...+.++
T Consensus 182 g~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~ 254 (321)
T 3ow8_A 182 GAIDGIINIFDIATGK----LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS---GHASWVLNV 254 (321)
T ss_dssp EETTSCEEEEETTTTE----EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC---CCSSCEEEE
T ss_pred EcCCCeEEEEECCCCc----EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc---CCCCceEEE
Confidence 5 58999999987642 245567777889999999999999999999999999999988877665 356778999
Q ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeec
Q 021669 235 SFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 235 ~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~ 298 (309)
+|+|++++|++++.|++|++||+.+++++.++.+|...|.+++|+|++++|++++.|..+.+|+
T Consensus 255 ~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 255 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999985544444
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-46 Score=331.90 Aligned_cols=288 Identities=15% Similarity=0.213 Sum_probs=245.6
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
+..++|++|.++|.+++|+|++++|||||.|++|+|||..++++.+.+..+...+..++|+|++..+++++. |+.++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~---d~~i~ 131 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL---DNKCS 131 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST---TSEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC---CCCEE
Confidence 456789999999999999999999999999999999999999999999988889999999999999988754 89999
Q ss_pred EEEccCC------ceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCc--eeEEECC--CC-
Q 021669 82 LLSLHDN------KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDD--QG- 150 (309)
Q Consensus 82 ~~d~~~~------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~--~~~~~~~--~~- 150 (309)
+|++... .....+.+|.+.|.++.|+|+++.|++++.|++|++||++++++...+..+.. ....+.+ ++
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 9998643 34567889999999999999999999999999999999999988776654332 2334443 33
Q ss_pred cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCc
Q 021669 151 LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS 230 (309)
Q Consensus 151 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~ 230 (309)
.+++++.|+.|++||++..+ .+..+.++...+.+++|+|++.++++++.|++|++||++++..+..+... .....
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~-~~~~~ 286 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQ----CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE-SIIFG 286 (354)
T ss_dssp EEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCSC
T ss_pred EEEEEeCCCeEEEEECCCCc----EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-Ccccc
Confidence 45666679999999998643 24456677889999999999999999999999999999988777655422 12345
Q ss_pred cceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeee
Q 021669 231 TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 297 (309)
Q Consensus 231 ~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~ 297 (309)
+..++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|..+.+|
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 6789999999999999999999999999999999999999999999999999999999998555444
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-47 Score=339.60 Aligned_cols=292 Identities=20% Similarity=0.308 Sum_probs=242.6
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
..++|++|+++|++++|+|++++|+|||.|++|+|||+.+++++..+..|...|..++|+|+++.+++++ .|+.+++
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~---~d~~v~i 134 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGG---LDSACSI 134 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECC---SSSCCEE
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEee---CCCcEEE
Confidence 4578999999999999999999999999999999999999999999999999999999999999988765 4899999
Q ss_pred EEccCCc-------eEEEeeecccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCceeeeeeee-----cC--ceeEEEC
Q 021669 83 LSLHDNK-------YLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRV-----QG--RPAAAYD 147 (309)
Q Consensus 83 ~d~~~~~-------~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~-----~~--~~~~~~~ 147 (309)
||+.+.. ....+.+|.+.|.++.|+|+ +..|+||+.|++|++||++++++...+.. +. .....+.
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 9986532 34568899999999999997 45799999999999999999887665421 11 1233443
Q ss_pred C-CC-cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecC
Q 021669 148 D-QG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP 225 (309)
Q Consensus 148 ~-~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~ 225 (309)
+ ++ .+++++.|+.|++||++.... .+..+.+|...+.+++|+|+|++|++++.||+|++||+.++..+..+..+.
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~ 291 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSR---AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREP 291 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCC---CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCC
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCc---ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccc
Confidence 3 34 455666799999999974322 234566788899999999999999999999999999999999887765432
Q ss_pred C----CCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe----ecCCCCCcEEEECCCeeEEEEccceEEEeee
Q 021669 226 V----SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW----MSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 297 (309)
Q Consensus 226 ~----~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~----~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~ 297 (309)
. +...+..++|+|+|++|++|+.||.|++||+.+++.+..+ .+|...|.+++|+|++++|++|+.|..+.+|
T Consensus 292 ~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 292 DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred cccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 1 1224778999999999999999999999999998888776 6799999999999999999999998555444
Q ss_pred cCC
Q 021669 298 DLS 300 (309)
Q Consensus 298 ~~~ 300 (309)
+++
T Consensus 372 ~~~ 374 (380)
T 3iz6_a 372 AFS 374 (380)
T ss_dssp ECC
T ss_pred ecC
Confidence 443
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-44 Score=313.26 Aligned_cols=289 Identities=22% Similarity=0.443 Sum_probs=243.2
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
+..++.+|.++|++++|+|++++|++|+.|++|++||+.+++....+.+|...|..++|+|+++.+++++. |+.|++
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~i~v 91 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD---DKTLKI 91 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC---CCEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999988864 889999
Q ss_pred EEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEE-EEECC
Q 021669 83 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA-VAFGG 159 (309)
Q Consensus 83 ~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~ 159 (309)
||+.+++.+..+.+|...|.++.|+|++++|++++.|++|++||++++++...+..+. .....+.+++.+++ ++.|+
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999888776665433 23456777765554 55689
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEE-CC
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF-SP 238 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-sp 238 (309)
.|++||++..+. .......+...+..++|+|+++++++++.|+.|++||+.+++.+..+..+...... ....| .+
T Consensus 172 ~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 247 (312)
T 4ery_A 172 LCRIWDTASGQC---LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC-IFANFSVT 247 (312)
T ss_dssp CEEEEETTTCCE---EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSC-CCEEEECS
T ss_pred cEEEEECCCCce---eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEE-EEEEEEeC
Confidence 999999876431 11112234457888999999999999999999999999999988877643322222 23344 46
Q ss_pred CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEcc--ce--EEEeeec
Q 021669 239 EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SE--LSFWIPD 298 (309)
Q Consensus 239 ~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~--~d--~~~~~~~ 298 (309)
++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|+++++++++ .| +++|..+
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 789999999999999999999999999999999999999999999999886 45 6667543
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-45 Score=318.63 Aligned_cols=283 Identities=17% Similarity=0.296 Sum_probs=233.8
Q ss_pred ccceEecCCCcceEEEEeCCCC-CEEEEeeCCCcEEEEEcCC-----CceeeeeeccccceeEEEEecCCCEEEEEcCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTA-----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG 75 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g 75 (309)
.+..+|++|+++|.+++|+|++ ++|+|||.|++|++||+.+ +.+++.+.+|...|..++|++++..+++++.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~-- 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW-- 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET--
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC--
Confidence 4567899999999999999965 8999999999999999864 3457788999999999999999999998864
Q ss_pred CCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCC----
Q 021669 76 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ---- 149 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~---- 149 (309)
|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||++... ...+..+. .....+.+.
T Consensus 86 -D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 86 -DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-LATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp -TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-EEEECCCSSCEEEEEECCC----
T ss_pred -CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EEEEeccCCcEEEEEEccCCCCC
Confidence 8999999999999999999999999999999999999999999999999987543 33332221 122333332
Q ss_pred --C-cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC
Q 021669 150 --G-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 226 (309)
Q Consensus 150 --~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~ 226 (309)
+ .+++++.|+.|++||++..+ ....+.+|...+.+++|+|+|++|++++.||+|++||+.+++.+..+..
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~--- 236 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQ----IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA--- 236 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTE----EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC---
T ss_pred CCccEEEEEeCCCEEEEEECCcch----hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---
Confidence 2 46666779999999987643 2345667888999999999999999999999999999999998877653
Q ss_pred CCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEee--------cCCCCCcEEEECCCeeEEEEccce--EEEee
Q 021669 227 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM--------SFDTEPPVIKWTPGSLMFVTGSSE--LSFWI 296 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~--------~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~ 296 (309)
...+..++|+|++.++++++.++ +++|++.....+..+. .|...+.+++|+|++++|++|+.| +++|.
T Consensus 237 -~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 237 -QDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp -CSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred -CCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 35688999999999999987655 9999998876666553 345667899999999999999998 55554
Q ss_pred e
Q 021669 297 P 297 (309)
Q Consensus 297 ~ 297 (309)
.
T Consensus 315 ~ 315 (319)
T 3frx_A 315 V 315 (319)
T ss_dssp E
T ss_pred E
Confidence 3
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.3e-45 Score=324.15 Aligned_cols=283 Identities=17% Similarity=0.167 Sum_probs=218.5
Q ss_pred ecCCCcceEEEEeCCCCCEEEEeeC------CCcEEEEEcCCCceeee----eeccccceeEEEEecCCCEEEEEcCCCC
Q 021669 7 FRDYNGRISSMDFHKSSSYLVTASD------DESIRLYDVTAATCLKT----INSKKYGVDLVCFTSHPTTVIYSSKNGW 76 (309)
Q Consensus 7 ~~~h~~~V~~i~~s~~~~~l~t~s~------D~~v~iWd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 76 (309)
...|++.|++++|+|||++|||||. |+++++|+..++..... ...|...|..++|+|++.. ++++.
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~--- 113 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASD--- 113 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEET---
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEEC---
Confidence 3579999999999999999999996 78899999887765433 3467778999999998754 44443
Q ss_pred CceeEEEEccCCceEE----EeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCC
Q 021669 77 DESLRLLSLHDNKYLR----YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQG 150 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~----~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~ 150 (309)
|++|++||+.+++.+. ...+|.+.|++++|+|++++|++++.|++|++||++++++...+..+. ...+.+.+++
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 7899999998876543 345899999999999999999999999999999999998877765433 2345565543
Q ss_pred --cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC-CCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC
Q 021669 151 --LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 151 --~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-g~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
.+++++.|+.|++||++..+. ........+...+.+++|+|+ +.++++++.|+.|++||+.+++.+..+. .+
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~---~~ 268 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA---VH 268 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC---CC
T ss_pred CceeeeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe---cc
Confidence 466677799999999986542 122233344556889999997 5688999999999999999988887765 35
Q ss_pred CCccceEEECCCC-CEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECC-CeeEEEEccceEEEeeecC
Q 021669 228 RNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 228 ~~~~~~~~~sp~g-~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p-~~~~l~s~~~d~~~~~~~~ 299 (309)
...+.+++|+|++ ++||+|+.|++|+|||+.+++.+..+ +|...|++|+|+| ++++|++++.|.++.+|++
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 5778899999997 68999999999999999998877654 7999999999999 7899999999844444443
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.8e-44 Score=313.27 Aligned_cols=284 Identities=14% Similarity=0.218 Sum_probs=226.2
Q ss_pred ccceEecCCCcceEEEEe-----CC-CCCEEEEeeCCCcEEEEEcCCC-------ceeeeeeccccceeEEEEecCCCEE
Q 021669 2 EVGMSFRDYNGRISSMDF-----HK-SSSYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHPTTV 68 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~-----s~-~~~~l~t~s~D~~v~iWd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~ 68 (309)
++..+|++|++.|++++| ++ ++++|+|||.|++|+|||+.++ .+...+.+|...|..++|+|++..+
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 356789999999999999 76 8999999999999999999743 4567788999999999999999998
Q ss_pred EEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee--c--CceeE
Q 021669 69 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--Q--GRPAA 144 (309)
Q Consensus 69 ~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~--~--~~~~~ 144 (309)
++++. |++|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|++|++||++.......... + .....
T Consensus 92 ~s~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 92 ISSSW---DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEET---TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE
T ss_pred EEEcC---CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee
Confidence 88764 89999999999999999999999999999999999999999999999999874432222111 1 12334
Q ss_pred EECCCC-----------cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECC
Q 021669 145 AYDDQG-----------LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 213 (309)
Q Consensus 145 ~~~~~~-----------~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~ 213 (309)
.+.+.+ .+++++.|+.|++||... .....+.++...+.+++|+|+|++|++++.||+|++||+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 555543 456666799999999432 1234556677889999999999999999999999999984
Q ss_pred C-CeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEE--Eee-----------cCCCCCcEEEEC
Q 021669 214 R-GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA--SWM-----------SFDTEPPVIKWT 279 (309)
Q Consensus 214 ~-~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~--~~~-----------~~~~~v~~l~~~ 279 (309)
. ......+. +...+.+++|+|++++++++ .|+.|++||+.+++... .+. +|...+.+++|+
T Consensus 244 ~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 244 NLTYPQREFD----AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp CCSSCSEEEE----CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred CCcccceeec----CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 3 33333332 23458899999999887655 68889999998776543 333 677889999999
Q ss_pred CCeeEEEEccceEEEeeec
Q 021669 280 PGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 280 p~~~~l~s~~~d~~~~~~~ 298 (309)
|++++|++|+.|..+.+|+
T Consensus 319 p~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 319 ALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp SSSCCEEEEETTSEEEEEE
T ss_pred CCCCeEEEecCCceEEEEE
Confidence 9999999999984444443
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-44 Score=315.02 Aligned_cols=289 Identities=11% Similarity=0.234 Sum_probs=230.6
Q ss_pred ccceEecCCCc-ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCcee--ee-eeccccceeEEEEecCCCEEEEEcCCCCC
Q 021669 2 EVGMSFRDYNG-RISSMDFHKSSSYLVTASDDESIRLYDVTAATCL--KT-INSKKYGVDLVCFTSHPTTVIYSSKNGWD 77 (309)
Q Consensus 2 ~~~~~~~~h~~-~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~--~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d 77 (309)
+++.+|.+|.+ .|.+++|+|+|++||||+.|++|+|||+.+++.+ .. ..+|...|..++|+|+++.+++++. |
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~---D 82 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF---D 82 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET---T
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC---C
Confidence 57788999998 9999999999999999999999999999877643 22 3678889999999999999998864 8
Q ss_pred ceeEEEEccCCc--eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCcee---eeeeeec--CceeEEECCCC
Q 021669 78 ESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLLRVQ--GRPAAAYDDQG 150 (309)
Q Consensus 78 ~~i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~---~~~~~~~--~~~~~~~~~~~ 150 (309)
+++++||+..++ .+..+.+|.+.|.+++|+|++++|++++.|++|++||++++.. ...+..+ ....+.+.+++
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 899999998764 5788999999999999999999999999999999999876543 2222222 12345677776
Q ss_pred cEE-EEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe-------------
Q 021669 151 LVF-AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT------------- 216 (309)
Q Consensus 151 ~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~------------- 216 (309)
.++ +++.|+.|++||.+..+ ......+.++...+.+++|+|+|++|++++.|++|++||.....
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~--~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~ 240 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDD--WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS 240 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CE
T ss_pred CEEEEEeCCCcEEEEEecCCC--EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCc
Confidence 544 45568999999986432 12345677888899999999999999999999999999963221
Q ss_pred --EeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCce---------EEEeecCCCCCcEEEECCCe-eE
Q 021669 217 --LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE---------VASWMSFDTEPPVIKWTPGS-LM 284 (309)
Q Consensus 217 --~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~---------~~~~~~~~~~v~~l~~~p~~-~~ 284 (309)
.+..+ ...|...+..++|+|++..|++++.|+.|++|+...... .....+|...|++|+|+|++ .+
T Consensus 241 ~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 318 (345)
T 3fm0_A 241 WKCICTL--SGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGL 318 (345)
T ss_dssp EEEEEEE--CSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTE
T ss_pred cceeEEe--cCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceE
Confidence 11122 223567789999999999999999999999999875421 11235789999999999998 59
Q ss_pred EEEccce--EEEeee
Q 021669 285 FVTGSSE--LSFWIP 297 (309)
Q Consensus 285 l~s~~~d--~~~~~~ 297 (309)
|++++.| +++|..
T Consensus 319 laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 319 LASCSDDGEVAFWKY 333 (345)
T ss_dssp EEEEETTSCEEEEEE
T ss_pred EEEcCCCCcEEEEEe
Confidence 9999998 666644
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.2e-44 Score=318.07 Aligned_cols=284 Identities=20% Similarity=0.337 Sum_probs=229.7
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeecccc------------------ceeEEEEecCCCEEEE
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY------------------GVDLVCFTSHPTTVIY 70 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~~ 70 (309)
+|.+.|.+++|+|||++||+|+ |++++||++.+++.+..+..+.. .|..++|+|+++.+++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 78999999999998887765432 3789999999999998
Q ss_pred EcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC-ceeEEECC-
Q 021669 71 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDD- 148 (309)
Q Consensus 71 ~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~-~~~~~~~~- 148 (309)
++. |++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+.... .....+.+
T Consensus 141 ~~~---d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAE---DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EcC---CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 864 8899999999999999999999999999999999999999999999999999988776655433 23455555
Q ss_pred CCcEE-EEEECCEEEEEECCCCCcCC-c--eEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeE-------
Q 021669 149 QGLVF-AVAFGGYIRMFDARKYEKGP-F--DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL------- 217 (309)
Q Consensus 149 ~~~~~-~~~~~~~i~~~d~~~~~~~~-~--~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~------- 217 (309)
++.++ +++.|+.|++||++...... + ......++...+.+++|+|+|+++++++.|++|++||+.+...
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 55544 45568999999987543100 0 0011145677899999999999999999999999999876432
Q ss_pred -----eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECC------CeeEEE
Q 021669 218 -----LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP------GSLMFV 286 (309)
Q Consensus 218 -----~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p------~~~~l~ 286 (309)
...+. .|...+.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|+
T Consensus 298 ~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 298 NSGTCEVTYI---GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 374 (393)
T ss_dssp ---CEEEEEE---CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred CCCcceEEEe---cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence 22222 3556788999999999999999999999999999999999999999999999876 689999
Q ss_pred EccceEEEeeecC
Q 021669 287 TGSSELSFWIPDL 299 (309)
Q Consensus 287 s~~~d~~~~~~~~ 299 (309)
+|+.|..+.+|++
T Consensus 375 sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 375 TGSGDCKARIWKY 387 (393)
T ss_dssp EEETTSEEEEEEE
T ss_pred EECCCCcEEECcc
Confidence 9999855555444
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-44 Score=315.91 Aligned_cols=281 Identities=15% Similarity=0.164 Sum_probs=216.8
Q ss_pred cCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCC-----------CceeeeeeccccceeEEEEecCCCEEEEEcCCCC
Q 021669 8 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-----------ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 76 (309)
Q Consensus 8 ~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 76 (309)
..|...|.+++|+|||++|++++ |+++|+||... .........+..+|..++|++++ .+++++.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~--- 101 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD--- 101 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET---
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC---
Confidence 45788899999999999999887 78889987421 01111122345679999999985 5666654
Q ss_pred CceeEEEEccCCceEEE----eeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCC
Q 021669 77 DESLRLLSLHDNKYLRY----FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQG 150 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~----~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~ 150 (309)
|++|++||+++++.+.. +.+|.+.|++++|+|++++|+||+.|++|++||++++++...+..+. .....+.+++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC
Confidence 88999999998875543 45899999999999999999999999999999999998877765433 2345666554
Q ss_pred -c-EEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC-CCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC
Q 021669 151 -L-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 151 -~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-g~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
. +++++.|+.|++||++..+. ...+....+...+.+++|+|+ ++++++++.||+|++||+++++++.++. .|
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~---~h 256 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA---VH 256 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE---CC
T ss_pred CCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc---CC
Confidence 3 45566789999999986542 222222233346789999985 5788999999999999999999888776 35
Q ss_pred CCccceEEECCCC-CEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCee-EEEEccce--EEEeeecC
Q 021669 228 RNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGSSE--LSFWIPDL 299 (309)
Q Consensus 228 ~~~~~~~~~sp~g-~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~-~l~s~~~d--~~~~~~~~ 299 (309)
...|.+++|+|+| ++|++||.|++|+|||+.+++.+ .+.+|...|.+|+|+|+++ +|++++.| +++|....
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 6788999999998 68999999999999999988654 5679999999999999985 67889888 66675543
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.4e-44 Score=336.64 Aligned_cols=292 Identities=16% Similarity=0.259 Sum_probs=234.5
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee-------ccccceeEEEEecCCCEEEEEcCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSHPTTVIYSSKN 74 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~s~~ 74 (309)
++.++|.+|.+.|.+++|+|+|++||||+.|++|+|||+.+++++..+. +|...|..++|+|+++.+++++.
T Consensus 181 ~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~- 259 (611)
T 1nr0_A 181 KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA- 259 (611)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET-
T ss_pred eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC-
Confidence 3467889999999999999999999999999999999999999988884 78889999999999999998864
Q ss_pred CCCceeEEEEccCCceEE-------------------------------------------EeeecccCEEEEEecCCCC
Q 021669 75 GWDESLRLLSLHDNKYLR-------------------------------------------YFKGHHDRVVSLSLCSSKD 111 (309)
Q Consensus 75 g~d~~i~~~d~~~~~~~~-------------------------------------------~~~~h~~~v~~v~~~~~~~ 111 (309)
|++|++||+.+++.+. .+.+|.+.|++++|+|+++
T Consensus 260 --D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 260 --DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337 (611)
T ss_dssp --TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred --CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC
Confidence 8899999998766443 3458999999999999999
Q ss_pred eEEEecCCCcEEEeeCCCceeeeeeee-c--CceeEEECCCCcEEEEEECCEEEEEECCCCCcCC-----------ceEE
Q 021669 112 CFISGSLDRTVLLWDQRAEKCQGLLRV-Q--GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGP-----------FDIF 177 (309)
Q Consensus 112 ~l~s~s~Dg~v~~Wd~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-----------~~~~ 177 (309)
+|+|++.|++|++||++++++...+.. + ......+.+++.+++++.|+.+++|++....... ....
T Consensus 338 ~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~ 417 (611)
T 1nr0_A 338 TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGL 417 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEE
T ss_pred EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEE
Confidence 999999999999999998876554311 1 2234566677888888889999999975422100 0000
Q ss_pred EeC-------------------------CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccc
Q 021669 178 SVG-------------------------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 232 (309)
Q Consensus 178 ~~~-------------------------~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~ 232 (309)
... .+...+.+++|||||+++++++.|++|++||+..+....... ..|...+.
T Consensus 418 ~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~--~~h~~~v~ 495 (611)
T 1nr0_A 418 AVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT--IVHPAEIT 495 (611)
T ss_dssp EECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE--EECSSCEE
T ss_pred EEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec--cCCCCceE
Confidence 000 122457889999999999999999999999997765432211 23567899
Q ss_pred eEEECCCCCEEEEEcCCCcEEEEECCC-CceEEE--eecCCCCCcEEEECCCeeEEEEccce--EEEeeec
Q 021669 233 EASFSPEGMFVISGSGDGSVYAWSVRS-GKEVAS--WMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 298 (309)
Q Consensus 233 ~~~~sp~g~~l~s~s~Dg~i~vwd~~~-~~~~~~--~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~ 298 (309)
+++|+|||++|++++.|++|++||+.+ ++.+.. +..|...|.+++|+||+++|++|+.| +++|..+
T Consensus 496 ~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 496 SVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 566 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECC
Confidence 999999999999999999999999987 555443 34499999999999999999999998 5555543
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-42 Score=302.13 Aligned_cols=289 Identities=17% Similarity=0.288 Sum_probs=219.9
Q ss_pred CccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCC--ceeeee-ec-cccceeEEEEecCCCEEEEEcCCCC
Q 021669 1 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTI-NS-KKYGVDLVCFTSHPTTVIYSSKNGW 76 (309)
Q Consensus 1 ~~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~s~~g~ 76 (309)
++++++|++|.++|.+++|+|+ +||||+.|++|+|||+.++ +.+..+ .. |...|..++|+|+++.+++++.
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~--- 78 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF--- 78 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET---
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC---
Confidence 3578899999999999999997 9999999999999999875 445555 34 8888999999999999888764
Q ss_pred CceeEEEEccC-------CceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCc----eeeeeeeecC--cee
Q 021669 77 DESLRLLSLHD-------NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE----KCQGLLRVQG--RPA 143 (309)
Q Consensus 77 d~~i~~~d~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~----~~~~~~~~~~--~~~ 143 (309)
|++|++||++. .+.+..+.+|.+.|.+++|+|++++|+||+.|++|++||++.. ++...+..+. ...
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 88999999853 3467788999999999999999999999999999999998532 2333333222 334
Q ss_pred EEECCCCcEEE-EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC--CCEEEEEeCCCcEEEEECCCC-----
Q 021669 144 AAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVLDSFRG----- 215 (309)
Q Consensus 144 ~~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d--g~~l~~~~~dg~v~i~d~~~~----- 215 (309)
+.+.+++.+++ ++.|+.|++||.+.... ..+..+.+|...+.+++|+|+ +..+++++.|++|++||+..+
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCCe--eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 66777776555 45689999999764211 124566788889999999999 779999999999999998653
Q ss_pred ---eEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCc--eEEE-eecCCC-CCcEEEECC--CeeEEE
Q 021669 216 ---TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK--EVAS-WMSFDT-EPPVIKWTP--GSLMFV 286 (309)
Q Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~--~~~~-~~~~~~-~v~~l~~~p--~~~~l~ 286 (309)
.....+ ...|...+.+++|+|++ +|++++.||+|++||..+++ .+.. +..|.. .+.+++|+| ++++|+
T Consensus 237 ~~~~~~~~~--~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~la 313 (330)
T 2hes_X 237 QEWVCEAIL--PDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILA 313 (330)
T ss_dssp EEEEEEEEC--CSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEE
T ss_pred ceeEEeeec--ccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEE
Confidence 122221 22356788999999765 89999999999999998774 3333 356876 899999999 689999
Q ss_pred EccceEEEeeecC
Q 021669 287 TGSSELSFWIPDL 299 (309)
Q Consensus 287 s~~~d~~~~~~~~ 299 (309)
+|+.|..+.+|++
T Consensus 314 s~s~Dg~v~~W~~ 326 (330)
T 2hes_X 314 TGGDDGIVNFWSL 326 (330)
T ss_dssp EEETTSEEEEEEC
T ss_pred EecCCCcEEEEEe
Confidence 9999855555554
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.7e-42 Score=326.45 Aligned_cols=286 Identities=16% Similarity=0.225 Sum_probs=236.8
Q ss_pred cceEecCCCcceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
...++.+|.+.|.+++|+|++. +|+||+.|++|++||..+++++.++.+|...|..++|+|+++.+++++. |++|+
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~---D~~i~ 215 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG---DGTIV 215 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC---CCcEE
Confidence 3456889999999999999987 5999999999999999999999999999999999999999999988764 89999
Q ss_pred EEEccCCceEEEee-------ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC-----ceeEEECCC
Q 021669 82 LLSLHDNKYLRYFK-------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-----RPAAAYDDQ 149 (309)
Q Consensus 82 ~~d~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~-----~~~~~~~~~ 149 (309)
+||+.+++.+..+. +|.+.|.+++|+|++++|+|++.|++|++||++++++...+.... .....+ ..
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 294 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW-TK 294 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE-CS
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE-cC
Confidence 99999999888884 799999999999999999999999999999999988776664321 112233 45
Q ss_pred CcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeee-c----
Q 021669 150 GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV-K---- 224 (309)
Q Consensus 150 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~-~---- 224 (309)
..+++++.++.+++||..... ....+.+|...+.+++|+|||++|++++.|++|++||+.++.....+.. +
T Consensus 295 ~~l~s~s~d~~i~~~~~~~~~----~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v 370 (611)
T 1nr0_A 295 QALVSISANGFINFVNPELGS----IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 370 (611)
T ss_dssp SCEEEEETTCCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCE
T ss_pred CEEEEEeCCCcEEEEeCCCCC----cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceE
Confidence 567778889999999976432 2345667888999999999999999999999999999887654332100 0
Q ss_pred --------------------------------------------------C------------------------CCCCc
Q 021669 225 --------------------------------------------------P------------------------VSRNS 230 (309)
Q Consensus 225 --------------------------------------------------~------------------------~~~~~ 230 (309)
+ .+...
T Consensus 371 ~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~ 450 (611)
T 1nr0_A 371 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYN 450 (611)
T ss_dssp EEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSC
T ss_pred EEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCC
Confidence 0 01123
Q ss_pred cceEEECCCCCEEEEEcCCCcEEEEECCCCce--EEEeecCCCCCcEEEECCCeeEEEEccce--EEEeee
Q 021669 231 TLEASFSPEGMFVISGSGDGSVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 297 (309)
Q Consensus 231 ~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~--~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~ 297 (309)
+.+++|+|||++||+|+.|++|++||+.+++. +.. ..|...|.+++|+||+++|++++.| +++|..
T Consensus 451 v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~ 520 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSV 520 (611)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred ceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEc
Confidence 45789999999999999999999999987643 334 6799999999999999999999998 555544
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.6e-42 Score=297.36 Aligned_cols=286 Identities=17% Similarity=0.263 Sum_probs=232.2
Q ss_pred ccceEecCCCcceEEEEeCCC-CCEEEEeeCCCcEEEEEcCCCc-----eeeeeeccccceeEEEEecCCCEEEEEcCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAAT-----CLKTINSKKYGVDLVCFTSHPTTVIYSSKNG 75 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~-~~~l~t~s~D~~v~iWd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g 75 (309)
++-.+|+||+++|++|+|+|+ +++|||||.|++|||||+.+++ +.+.+.+|...|..++|+|+++.+++++.
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~-- 106 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW-- 106 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET--
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc--
Confidence 355689999999999999997 6899999999999999997643 46678899999999999999999998864
Q ss_pred CCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee-c--CceeEEECCC--C
Q 021669 76 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-Q--GRPAAAYDDQ--G 150 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~-~--~~~~~~~~~~--~ 150 (309)
|+.|++|+............+...+..+.++++++.|++++.|+.+++||............ . ......+.+. .
T Consensus 107 -d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 107 -DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp -TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred -cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 88999999999998888899999999999999999999999999999999876544322211 1 1223344332 2
Q ss_pred -cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCC
Q 021669 151 -LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 229 (309)
Q Consensus 151 -~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~ 229 (309)
.+++++.|+.|++||++..+ ....+.++...+.+++|+|++++|++++.||.|++||+.+...+..+.. ..
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~----~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~----~~ 257 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG----GD 257 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC----SS
T ss_pred cEEEEEcCCCEEEEEECCCCc----eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC----Cc
Confidence 34556678999999987643 2445667778899999999999999999999999999999988877653 35
Q ss_pred ccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe---------ecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 230 STLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW---------MSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 230 ~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~---------~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
.+..++|+|++.+ ++++.|+.|++||++++..+..+ ..|...|++++|+|++++|++|+.|..+.+|++
T Consensus 258 ~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 258 IINALCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp CEEEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred eEEeeecCCCCce-eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 6788999998765 45667999999999988766554 368889999999999999999999844444443
No 18
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-41 Score=323.45 Aligned_cols=285 Identities=18% Similarity=0.257 Sum_probs=233.5
Q ss_pred ceEecCCCcceEEEEeCCCC-CEEEEeeCCCcEEEEEcCCC-----ceeeeeeccccceeEEEEecCCCEEEEEcCCCCC
Q 021669 4 GMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAA-----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 77 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d 77 (309)
-..+++|++.|++|+|+|++ ++|+|||.|++|+|||+.+. .+.+.+.+|...|.+++|+++++.+++++. |
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~---D 451 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW---D 451 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET---T
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC---C
Confidence 34688999999999999865 79999999999999999753 455778899999999999999999998864 8
Q ss_pred ceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee---c--CceeEEECCCC--
Q 021669 78 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---Q--GRPAAAYDDQG-- 150 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~---~--~~~~~~~~~~~-- 150 (309)
++|++||+.+++.+..+.+|.+.|.+++|+|++++|+|++.|++|++||............ + ......+++.+
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 9999999999999999999999999999999999999999999999999865433222111 1 12345666654
Q ss_pred -cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCC
Q 021669 151 -LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 229 (309)
Q Consensus 151 -~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~ 229 (309)
.+++++.|+.|++||++..+ ....+.+|...+.+++|+|+|+++++++.||+|++||+.+++.+..+. +..
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~----~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~----~~~ 603 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCK----LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE----ANS 603 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB----CSS
T ss_pred ceEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec----CCC
Confidence 46667779999999997643 234567788899999999999999999999999999999998876654 235
Q ss_pred ccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCC-------------------CCcEEEECCCeeEEEEccc
Q 021669 230 STLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT-------------------EPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 230 ~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~-------------------~v~~l~~~p~~~~l~s~~~ 290 (309)
.+..++|+|++.++++++ |+.|++||+.+++.+..+..+.. .+++++|+|++++|++|+.
T Consensus 604 ~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp CEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 678899999999888776 55699999999988776643211 2578999999999999999
Q ss_pred eEEEeeecCC
Q 021669 291 ELSFWIPDLS 300 (309)
Q Consensus 291 d~~~~~~~~~ 300 (309)
|..+.+|++.
T Consensus 683 Dg~i~iW~i~ 692 (694)
T 3dm0_A 683 DGVIRVWGIG 692 (694)
T ss_dssp TSEEEEEEC-
T ss_pred CCeEEEEecc
Confidence 9777666654
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.4e-41 Score=313.71 Aligned_cols=280 Identities=19% Similarity=0.313 Sum_probs=236.5
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
++...+.+|.+.|.+++|+|++++|++++.|++|++||.. +..+..+..|...+..++|+|+++.+++++. |+.++
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---dg~v~ 369 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVK 369 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeC---CCEEE
Confidence 4567788999999999999999999999999999999975 4567778888889999999999999988765 78999
Q ss_pred EEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEE-EEC
Q 021669 82 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAV-AFG 158 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~ 158 (309)
+||. +++.+..+.+|...|++++|+|++++|++++.|+.|++||. +++....+..+. .....+++++.++++ +.|
T Consensus 370 ~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 370 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 9995 56788899999999999999999999999999999999995 444444443322 234567777766655 468
Q ss_pred CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECC
Q 021669 159 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 238 (309)
Q Consensus 159 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp 238 (309)
+.|++||... ..+..+.++...+.+++|+||+++|++++.|+.|++||. +++++.++. .|...+.+++|+|
T Consensus 448 ~~v~~w~~~~-----~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~---~h~~~v~~l~~s~ 518 (577)
T 2ymu_A 448 KTVKLWNRNG-----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVRGVAFSP 518 (577)
T ss_dssp SEEEEEETTS-----CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE---CCSSCEEEEEECT
T ss_pred CEEEEEECCC-----CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe---CCCCCEEEEEEcC
Confidence 9999999632 123455667788999999999999999999999999995 677777765 3567889999999
Q ss_pred CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeee
Q 021669 239 EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 297 (309)
Q Consensus 239 ~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~ 297 (309)
||++|++++.|+.|++||. +++.+.++.+|...|.+++|+||+++|++++.|..+.+|
T Consensus 519 dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 9999999999999999996 678899999999999999999999999999998444443
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-40 Score=292.01 Aligned_cols=284 Identities=13% Similarity=0.187 Sum_probs=241.8
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
...|.+|++.|++++|+|++++|++|+.|+.|++||+.+++++..+.+|...|..++|+++++.+++++. |+.|++|
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iw 101 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DYSIKLW 101 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CCeEEEE
Confidence 3568999999999999999999999999999999999999999999999999999999999999988764 8899999
Q ss_pred EccCCceEEEeeecccCEEEEEecCCCCeEEEecCC-----CcEEEeeCCCceeeeeee-----------ec----Ccee
Q 021669 84 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLR-----------VQ----GRPA 143 (309)
Q Consensus 84 d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D-----g~v~~Wd~~~~~~~~~~~-----------~~----~~~~ 143 (309)
|+.+++.+..+. |...|.+++|+|++++|++++.+ +.|++||++.......+. .. ....
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999888888 89999999999999999999999 999999987554221111 00 2234
Q ss_pred EEECCCCcEEEE-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 144 AAYDDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 144 ~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
..+.+++.++++ +.++.|++||++... .....+..+...+.+++|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTT---EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 556666655554 568999999987521 1234455567789999999999999999999999999999998888775
Q ss_pred ecCCCCCccceEEECCCCCEEEEEcCCC--------------cEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEc
Q 021669 223 VKPVSRNSTLEASFSPEGMFVISGSGDG--------------SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 223 ~~~~~~~~~~~~~~sp~g~~l~s~s~Dg--------------~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~ 288 (309)
+...+..++|+|+++++++++.++ .+++||+.+++.+..+.+|...|.+++|+|++++|+++
T Consensus 258 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 333 (369)
T 3zwl_B 258 ----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASG 333 (369)
T ss_dssp ----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEE
Confidence 345678899999999999999998 89999999999999999999999999999999999999
Q ss_pred cce--EEEeeec
Q 021669 289 SSE--LSFWIPD 298 (309)
Q Consensus 289 ~~d--~~~~~~~ 298 (309)
+.| +++|..+
T Consensus 334 ~~dg~v~iw~~~ 345 (369)
T 3zwl_B 334 GEDGFIRLHHFE 345 (369)
T ss_dssp ETTSEEEEEEEC
T ss_pred cCCCeEEEEECc
Confidence 988 5555443
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3e-41 Score=290.25 Aligned_cols=250 Identities=14% Similarity=0.181 Sum_probs=202.4
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCC--CceeeeeeccccceeEEEEecC--CCEEEEEcCCCCCce
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA--ATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDES 79 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g~d~~ 79 (309)
++.+.+|++.|.+++|+|+|++||||+.|++|+|||+.+ ++++.++.+|..+|..++|+++ ++.+++++. |++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~---D~~ 78 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK 78 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET---TTE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC---CCE
Confidence 578899999999999999999999999999999999974 4678899999999999999864 677887764 899
Q ss_pred eEEEEccCCc--eEEEeeecccCEEEEEecCC--CCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEE
Q 021669 80 LRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV 155 (309)
Q Consensus 80 i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (309)
|++||+++++ .+..+.+|...|.+++|+|+ +++|++++.|++|++||++++......
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~------------------- 139 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI------------------- 139 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE-------------------
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee-------------------
Confidence 9999998874 56778899999999999997 889999999999999998765311000
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC-------------CCEEEEEeCCCcEEEEECCCCe----Ee
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-------------GRLMLLTTMEGHIHVLDSFRGT----LL 218 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-------------g~~l~~~~~dg~v~i~d~~~~~----~~ 218 (309)
.+.++...+.+++|+|+ +++|++++.|++|++||..++. +.
T Consensus 140 ----------------------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~ 197 (297)
T 2pm7_B 140 ----------------------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (297)
T ss_dssp ----------------------EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred ----------------------eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEE
Confidence 01122334556666665 6799999999999999987765 33
Q ss_pred EEeeecCCCCCccceEEECCCC---CEEEEEcCCCcEEEEECCCCc---eEEEe--ecCCCCCcEEEECCCeeEEEEccc
Q 021669 219 STYNVKPVSRNSTLEASFSPEG---MFVISGSGDGSVYAWSVRSGK---EVASW--MSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~sp~g---~~l~s~s~Dg~i~vwd~~~~~---~~~~~--~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
.++. .|...|.+++|+|++ ++||+++.|++|++||+.+.+ ....+ ..|...+.+++|+|++++|++++.
T Consensus 198 ~~l~---~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 198 STLE---GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp EEEC---CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred EEec---CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 3333 466789999999995 899999999999999997743 12223 467888999999999999999998
Q ss_pred e--EEEeeecCC
Q 021669 291 E--LSFWIPDLS 300 (309)
Q Consensus 291 d--~~~~~~~~~ 300 (309)
| +++|...+.
T Consensus 275 D~~v~lw~~~~~ 286 (297)
T 2pm7_B 275 DNKVTLWKENLE 286 (297)
T ss_dssp TSCEEEEEECTT
T ss_pred CCcEEEEEECCC
Confidence 8 777766543
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.7e-41 Score=301.93 Aligned_cols=247 Identities=19% Similarity=0.362 Sum_probs=215.0
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
++.++|.+|.+.|.+++|+|++++|+||+.|++|+|||+.++++++++.+|...|..++|+|++..+++++. |++|+
T Consensus 141 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~---D~~i~ 217 (410)
T 1vyh_C 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR---DKTIK 217 (410)
T ss_dssp CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET---TSEEE
T ss_pred cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC---CCeEE
Confidence 467889999999999999999999999999999999999999999999999999999999999999988764 89999
Q ss_pred EEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCC----------
Q 021669 82 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ---------- 149 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~---------- 149 (309)
+||+.+++++..+.+|...|.++.++|++++|++|+.|++|++||++++++...+..+. .....+.+.
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 297 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCC
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhc
Confidence 99999999999999999999999999999999999999999999999887766554332 223444442
Q ss_pred ----------C-cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEe
Q 021669 150 ----------G-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 218 (309)
Q Consensus 150 ----------~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~ 218 (309)
+ .+++++.|+.|++||++... .+..+.+|...+.+++|+|+|++|++++.||+|++||..+++.+
T Consensus 298 ~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~----~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp SCC-------CCEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred cccccccCCCCCEEEEEeCCCeEEEEECCCCc----eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 3 45556678999999987643 34556677788999999999999999999999999999998888
Q ss_pred EEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECC
Q 021669 219 STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~ 258 (309)
..+. .|...|.+++|+|++.+|++||.|++|++|+++
T Consensus 374 ~~~~---~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 374 KTLN---AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEE---CCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEc---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 7775 356789999999999999999999999999863
No 23
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=287.29 Aligned_cols=245 Identities=15% Similarity=0.223 Sum_probs=217.4
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
...+.+|...|.+++|+|++.+++|++.|++|++||+.+++++..+..+...+..++|+|+++.+++++. |+.+++|
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~---dg~v~i~ 149 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH---VGKVNIF 149 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT---TSEEEEE
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC---CCcEEEE
Confidence 4568899999999999999999999999999999999999999999998888999999999999988764 8899999
Q ss_pred EccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEEE-ECCE
Q 021669 84 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAVA-FGGY 160 (309)
Q Consensus 84 d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~ 160 (309)
|+++++....+..|...|.+++|+|++++|++++.|++|++||++++++...+.... ...+.+.+++.+++++ .|+.
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~ 229 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 229 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe
Confidence 999999999999999999999999999999999999999999999998877665332 3456788877666655 5899
Q ss_pred EEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCC
Q 021669 161 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 240 (309)
Q Consensus 161 i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g 240 (309)
|++||++..+ ....+.++...+.+++|+|++++|++++.|++|++||+.+++++.++. .|...+..++|+|+|
T Consensus 230 i~iwd~~~~~----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~---~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 230 IKIYDVQHAN----LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF---DHQDQVWGVKYNGNG 302 (321)
T ss_dssp EEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTS
T ss_pred EEEEECCCcc----eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc---CCCCcEEEEEECCCC
Confidence 9999987543 244667788889999999999999999999999999999999888775 356788999999999
Q ss_pred CEEEEEcCCCcEEEEECC
Q 021669 241 MFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 241 ~~l~s~s~Dg~i~vwd~~ 258 (309)
++|++++.|++|++||..
T Consensus 303 ~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 303 SKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTCCEEEEECC
T ss_pred CEEEEEeCCCeEEEEeCC
Confidence 999999999999999974
No 24
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.7e-41 Score=299.16 Aligned_cols=287 Identities=14% Similarity=0.172 Sum_probs=237.0
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc------eeeeeeccccceeEEEEecC----C---CEEE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT------CLKTINSKKYGVDLVCFTSH----P---TTVI 69 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~~~ 69 (309)
+.+.+.+|++.|++++|+| ++|++|+.|++|+|||+.+++ ++..+..|...|..++|+++ + ..++
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4567789999999999999 799999999999999999887 78888999999999999999 8 8888
Q ss_pred EEcCCCCCceeEEEEccCCce-----EEEeeec-----ccCEEEEEec----CCCCe-EEEecCCCcEEEeeCCC-----
Q 021669 70 YSSKNGWDESLRLLSLHDNKY-----LRYFKGH-----HDRVVSLSLC----SSKDC-FISGSLDRTVLLWDQRA----- 129 (309)
Q Consensus 70 ~~s~~g~d~~i~~~d~~~~~~-----~~~~~~h-----~~~v~~v~~~----~~~~~-l~s~s~Dg~v~~Wd~~~----- 129 (309)
+++. |+.|++||+.+++. +..+.+| ...|.+++|+ |+++. |++++.||.|++||+++
T Consensus 86 s~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 86 TTSF---SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEET---TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEcC---CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 7764 88999999999887 8889999 5999999999 99999 99999999999999987
Q ss_pred -ceeee-----eeee---------cCceeEEECCCCcEEEEE-ECCEEEEEECCCCCcCCceEEEeCC---C---CCCCe
Q 021669 130 -EKCQG-----LLRV---------QGRPAAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGG---D---ISDAN 187 (309)
Q Consensus 130 -~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~---~---~~~~~ 187 (309)
.+... .+.. .....+.+.+++ +++++ .++.|++||++..+ .+..+.. + ...+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLR----PLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE----EEEEEECCC---CCCCCEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc----eeEEEeccccccccCCccc
Confidence 55443 3321 123456677777 55554 57999999997632 2334444 5 67899
Q ss_pred EEEEccCCCEEEEEeCC---CcEEEEECCCCeEeEEeeecC----------CCCCccceEEECCCCCEEEEEcCCCcEEE
Q 021669 188 VVKFSNDGRLMLLTTME---GHIHVLDSFRGTLLSTYNVKP----------VSRNSTLEASFSPEGMFVISGSGDGSVYA 254 (309)
Q Consensus 188 ~v~~s~dg~~l~~~~~d---g~v~i~d~~~~~~~~~~~~~~----------~~~~~~~~~~~sp~g~~l~s~s~Dg~i~v 254 (309)
+++|+|++++|++++.| +.|++||+.+++.+..+.... .+...+..++|+|++++|++++.|+.|++
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 317 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred eEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 99999999999999999 999999999998887765310 05577889999999999999999999999
Q ss_pred EECCCCceEEEee------cC---------------CCCCcEEEECCCe----------eEEEEccceEEEeeecC
Q 021669 255 WSVRSGKEVASWM------SF---------------DTEPPVIKWTPGS----------LMFVTGSSELSFWIPDL 299 (309)
Q Consensus 255 wd~~~~~~~~~~~------~~---------------~~~v~~l~~~p~~----------~~l~s~~~d~~~~~~~~ 299 (309)
||+.+++.+..+. .| ...|.+++|+|++ ++|++++.|..+.+|++
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 9999999999998 78 8999999999998 79999998844444443
No 25
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.3e-40 Score=293.01 Aligned_cols=289 Identities=13% Similarity=0.170 Sum_probs=226.2
Q ss_pred ccceEecCCCcceEEEEeCCCC-CEEEEeeCCCcEEEEEcCCCceeeeee--ccccceeEEEEec-CCCEEEEEcCCCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTS-HPTTVIYSSKNGWD 77 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~~~~~s~~g~d 77 (309)
++..++.+|.+.|.+++|+|++ ++|++|+.|++|+|||+.+++....+. +|...|..++|+| ++..+++++. |
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d 140 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI---R 140 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET---T
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC---C
Confidence 4567889999999999999999 999999999999999999888877765 5888999999999 5667777654 8
Q ss_pred ceeEEEEccCCceEEEeeecc---cCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCc-
Q 021669 78 ESLRLLSLHDNKYLRYFKGHH---DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGL- 151 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~~~h~---~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~- 151 (309)
+.|++||+.+ +.+..+..|. ..|.+++|+|++++|++++.|+.|++||++ +++...+..+. ...+.+.+++.
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTT
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCC
Confidence 8999999986 5566665544 889999999999999999999999999985 44444443322 33466777765
Q ss_pred -EEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc-CCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC---
Q 021669 152 -VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--- 226 (309)
Q Consensus 152 -~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~--- 226 (309)
+++++.|+.|++||++..+......... ++...+.+++|+| +++++++++.|+.|++||+.+++....+..+..
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 5555568999999998754322222233 4667899999999 999999999999999999988776655443211
Q ss_pred -CC----------CccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeec--CCCCCcEEEECCCeeEEEEccceEE
Q 021669 227 -SR----------NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS--FDTEPPVIKWTPGSLMFVTGSSELS 293 (309)
Q Consensus 227 -~~----------~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~--~~~~v~~l~~~p~~~~l~s~~~d~~ 293 (309)
+. ..+..++|+|+|++ +|+.|+.|++||+.+++.+..+.. |...+..++|+|++++|++++ |..
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN 374 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence 11 22334667777776 888999999999999999999876 567788889999999999996 644
Q ss_pred EeeecC
Q 021669 294 FWIPDL 299 (309)
Q Consensus 294 ~~~~~~ 299 (309)
+.+|++
T Consensus 375 i~iw~~ 380 (383)
T 3ei3_B 375 ILIWNR 380 (383)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 544444
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-39 Score=303.87 Aligned_cols=291 Identities=19% Similarity=0.339 Sum_probs=243.4
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
+.++.+.+|...|.+++|+|++++|++++.|++|++||. ++++++.+.+|...+..++|+|++..+++++. |++++
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~---d~~i~ 328 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVK 328 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeC---CCeEE
Confidence 456788999999999999999999999999999999996 46788889999999999999999999988764 88999
Q ss_pred EEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEE-EEEC
Q 021669 82 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA-VAFG 158 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~ 158 (309)
+||+.. +.+..+.+|...|.+++|+|++++|++++.|+++++||. +++....+..+. ...+.+++++.+++ ++.|
T Consensus 329 ~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d 406 (577)
T 2ymu_A 329 LWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 406 (577)
T ss_dssp EEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCC
Confidence 999865 457788999999999999999999999999999999995 444544443322 23466777776555 4568
Q ss_pred CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECC
Q 021669 159 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 238 (309)
Q Consensus 159 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp 238 (309)
+.|++||... . .+..+.++...+.+++|+||++++++++.|+.|++||. +++.+..+. .|...+.+++|+|
T Consensus 407 ~~v~~~~~~~----~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~---~~~~~v~~~~~sp 477 (577)
T 2ymu_A 407 KTVKLWNRNG----Q-LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVRGVAFSP 477 (577)
T ss_dssp SEEEEECTTC----C-EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE---CCSSCEEEEEECT
T ss_pred CEEEEEeCCC----C-EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc---CCCCCEEEEEEcC
Confidence 9999999532 1 23455567788999999999999999999999999996 456666554 3557788999999
Q ss_pred CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce--EEEeeecCCCccccccC
Q 021669 239 EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLSKLGAYVGR 308 (309)
Q Consensus 239 ~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~~~~~~~~~~~ 308 (309)
|+++|++++.|++|++||. +++.+..+.+|...|++++|+|++++|++++.| +++|......+..+.||
T Consensus 478 d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h 548 (577)
T 2ymu_A 478 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH 548 (577)
T ss_dssp TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCC
Confidence 9999999999999999996 678899999999999999999999999999988 66666555566667665
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=288.48 Aligned_cols=241 Identities=20% Similarity=0.285 Sum_probs=198.7
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeee----eccccceeEEEEecCCCEEEEEcCCCCCceeEEEE
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI----NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 84 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d 84 (309)
.|...|.+++|+|++ .|++|+.|++|+|||+.+++++..+ .+|...|.+++|+|+++.+++++. |++|++||
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---d~~i~iwd 155 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---DICIKVWD 155 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEE
Confidence 466789999999985 7889999999999999998876543 478889999999999999998865 88999999
Q ss_pred ccCCceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeeecC----ceeEEECC-CCcEEEE-EE
Q 021669 85 LHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQG----RPAAAYDD-QGLVFAV-AF 157 (309)
Q Consensus 85 ~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~-~~ 157 (309)
+++++.+..+.+|.+.|++++|++++. .|+|++.|++|++||++++++...+.... ...+.+.+ .+.++++ +.
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 999999999999999999999999875 78999999999999999988776654322 23455555 4455554 56
Q ss_pred CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC-CEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEE
Q 021669 158 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 236 (309)
Q Consensus 158 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
|+.|++||++..+. +..+.+|...+.+++|+|+| ++|++++.|++|++||..+++++.. . .|...|.+++|
T Consensus 236 dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~---~H~~~V~~v~~ 307 (344)
T 4gqb_B 236 NGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-Q---AHRDFVRDATW 307 (344)
T ss_dssp TSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-C---CCSSCEEEEEE
T ss_pred CCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-c---CCCCCEEEEEE
Confidence 89999999986432 34566788899999999998 5789999999999999998876542 2 46788999999
Q ss_pred CCCCC-EEEEEcCCCcEEEEECCCCc
Q 021669 237 SPEGM-FVISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 237 sp~g~-~l~s~s~Dg~i~vwd~~~~~ 261 (309)
+|+++ .|+|||.|++|++|++.+..
T Consensus 308 sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 308 SPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CSSSTTEEEEEETTSCEEEEECCC--
T ss_pred eCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99986 57799999999999998753
No 28
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=288.33 Aligned_cols=283 Identities=15% Similarity=0.207 Sum_probs=229.3
Q ss_pred ccceEecCCCcceEEEEeCCC---CCEEEEeeCCCcEEEEEcCC-Ccee-eeeeccccceeEEEEecCCCEEEEEcCCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKS---SSYLVTASDDESIRLYDVTA-ATCL-KTINSKKYGVDLVCFTSHPTTVIYSSKNGW 76 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~---~~~l~t~s~D~~v~iWd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 76 (309)
+..+.+.+|.+.|++++|+|+ |++|++|+.|++|+|||+.+ +..+ ..+.+|...|..++|+|+++.+++++.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--- 106 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC--- 106 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC---
Confidence 456778999999999999999 69999999999999999997 5555 778889999999999999999998864
Q ss_pred CceeEEEEccCCceEEEeeecccCEEEEEe--cCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEE
Q 021669 77 DESLRLLSLHDNKYLRYFKGHHDRVVSLSL--CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 154 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (309)
|+.|++||+++++.+. +.+|...|.+++| ++++++|++++.|+.|++||++++++...+...............++.
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEE
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEE
Confidence 8899999999988665 6779999999999 889999999999999999999988877666554433222222346666
Q ss_pred EEECCEEEEEECCCCCcCCceEEEe-CCCCCCCeEEEEccCCCE----EEEEeCCCcEEEEECCCC---eEeEEeeecCC
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFSV-GGDISDANVVKFSNDGRL----MLLTTMEGHIHVLDSFRG---TLLSTYNVKPV 226 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~v~~s~dg~~----l~~~~~dg~v~i~d~~~~---~~~~~~~~~~~ 226 (309)
+..++.+++|+++.... ..... ........++++.+++.. +++++.||.|++||.... ..+..+..+..
T Consensus 186 ~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPS---EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEGGGCEEEEECSSSCE---EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred EeCCCcEEEEEeccccc---hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 77789999999876432 11111 122235567777766655 999999999999999876 33444432211
Q ss_pred ---------CCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce
Q 021669 227 ---------SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 291 (309)
Q Consensus 227 ---------~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d 291 (309)
+...+.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred ccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 11158899999999999999999999999999999999999999999999999999999999876
No 29
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-39 Score=278.76 Aligned_cols=279 Identities=18% Similarity=0.271 Sum_probs=229.9
Q ss_pred CccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 1 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 1 ~~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
+++.++|.+|++.|++++| |++++|++|+.|++|++||+.++++...+..|...+..++|+|++..+++++. |+.+
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i 83 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK---DTMI 83 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEET---TSCE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecC---CCeE
Confidence 3577889999999999999 99999999999999999999999999999999999999999999999998865 7899
Q ss_pred EEEEccCC---ceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCc--eeEEEC--CCCcEE
Q 021669 81 RLLSLHDN---KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYD--DQGLVF 153 (309)
Q Consensus 81 ~~~d~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~--~~~~~~--~~~~~~ 153 (309)
++|++... +.+..+.+|...|.++.| +++.|++++.|+.|++|| ..+....+..... ....+. ....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 99998654 567788999999999999 567999999999999999 3444444433222 223333 344566
Q ss_pred EEEECCEEEEEECCCCCcCCceEEEeCC-CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccc
Q 021669 154 AVAFGGYIRMFDARKYEKGPFDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 232 (309)
Q Consensus 154 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~ 232 (309)
+++.++.|++||... ....... +...+.+++++|++. +++++.||.|++||+.+++.+..+.. +...+.
T Consensus 160 ~~~~d~~i~i~d~~~------~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~ 229 (313)
T 3odt_A 160 TASADKTIKLWQNDK------VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG---HESFVY 229 (313)
T ss_dssp EEETTSCEEEEETTE------EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC---CSSCEE
T ss_pred EEECCCCEEEEecCc------eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc---CCceEE
Confidence 666789999999432 1223333 567899999999999 89999999999999999998887763 557788
Q ss_pred eEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce--EEEeeecC
Q 021669 233 EASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 299 (309)
Q Consensus 233 ~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~~ 299 (309)
.++|+|++ .+++++.||.|++||+.+++.+..+..|...+.+++|+|++++ ++++.| +++|..+.
T Consensus 230 ~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 230 CIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDI-IVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCE-EEEETTSCEEEEESCG
T ss_pred EEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCE-EEEeCCCcEEEEeCCC
Confidence 99999999 6899999999999999999999999999999999999999984 456666 66665543
No 30
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=290.32 Aligned_cols=291 Identities=15% Similarity=0.231 Sum_probs=226.6
Q ss_pred eEecCCCcceEEEEeCCCCCE-EEEeeC---CCcEEEEEcCCCceeeeee-ccccceeEEEEecC---CCEEEEEcCCCC
Q 021669 5 MSFRDYNGRISSMDFHKSSSY-LVTASD---DESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSH---PTTVIYSSKNGW 76 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~-l~t~s~---D~~v~iWd~~~~~~~~~~~-~~~~~v~~~~~~~~---~~~~~~~s~~g~ 76 (309)
..+++|.+.|.+++|+|++.. +++|+. |++|+|||+.+++...... .|...|.+++|+|+ +..+++++.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--- 88 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF--- 88 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET---
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC---
Confidence 456789999999999999965 556666 9999999999888765443 67788999999998 577887764
Q ss_pred CceeEEEEccCCc-eEEEeeecccCEEEEE------ecCCCCeEEEecCCCcEEEeeCCCce-eeeeeeec-C-----ce
Q 021669 77 DESLRLLSLHDNK-YLRYFKGHHDRVVSLS------LCSSKDCFISGSLDRTVLLWDQRAEK-CQGLLRVQ-G-----RP 142 (309)
Q Consensus 77 d~~i~~~d~~~~~-~~~~~~~h~~~v~~v~------~~~~~~~l~s~s~Dg~v~~Wd~~~~~-~~~~~~~~-~-----~~ 142 (309)
|+.|++||+.+++ .+..+.+|...|.++. |+|+++.|++++.|+.|++||+++++ ....+... . ..
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 8899999999988 8899999999999995 46789999999999999999998876 44443221 1 11
Q ss_pred eEE----ECCCCcEEEEE-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc---CCCEEEEEeCCCcEEEEECCC
Q 021669 143 AAA----YDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN---DGRLMLLTTMEGHIHVLDSFR 214 (309)
Q Consensus 143 ~~~----~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~---dg~~l~~~~~dg~v~i~d~~~ 214 (309)
... +++++.+++++ .++.|++||++..+. .....+...+.+++|+| ++.++++++.||.|++||+.+
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred EEEEEeccCCCCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 223 44566555555 579999999986432 22233456799999999 999999999999999999877
Q ss_pred CeEeEEee--ecCCCCCccceEEECCCCC-EEEEEcCCCcEEEEECCCC-------------------ceEEEeecCCCC
Q 021669 215 GTLLSTYN--VKPVSRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRSG-------------------KEVASWMSFDTE 272 (309)
Q Consensus 215 ~~~~~~~~--~~~~~~~~~~~~~~sp~g~-~l~s~s~Dg~i~vwd~~~~-------------------~~~~~~~~~~~~ 272 (309)
+..+..+. ....+...+..++|+|+++ ++++++.||.|++||+.++ +.+..+..|...
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (357)
T 3i2n_A 244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQP 323 (357)
T ss_dssp EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSC
T ss_pred CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCC
Confidence 65543332 1123567889999999998 8999999999999999754 356778899999
Q ss_pred CcEEEECCCeeEEE-EccceEEEeeecCCCcc
Q 021669 273 PPVIKWTPGSLMFV-TGSSELSFWIPDLSKLG 303 (309)
Q Consensus 273 v~~l~~~p~~~~l~-s~~~d~~~~~~~~~~~~ 303 (309)
|.+++|+|++++|+ +++.|..+.+|++.++.
T Consensus 324 v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 324 ISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 99999999999887 79888666666665553
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-38 Score=277.18 Aligned_cols=278 Identities=11% Similarity=0.172 Sum_probs=228.7
Q ss_pred ecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeee---e--ccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 7 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI---N--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 7 ~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~---~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
..+|.+.|.+++|+|++++|++++ |++|++||+.+++....+ . .|...+..++|+|+++.+++++. |+.|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~ 122 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLS 122 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC---CCcEE
Confidence 347999999999999999999999 999999999887654433 3 67788999999999998888764 78999
Q ss_pred EEEccCCc--eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEE-EE
Q 021669 82 LLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA-VA 156 (309)
Q Consensus 82 ~~d~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~ 156 (309)
+||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..+. .....+.+++..++ ++
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe
Confidence 99999877 667788999999999999999999999999999999999888776665332 23456777765554 45
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEE
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 236 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
.++.|++||++..+. .... .+...+.+++++|+++++++++.++.|++||..+++... +. .+...+..++|
T Consensus 203 ~dg~i~~~d~~~~~~----~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~---~~~~~v~~~~~ 273 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQ----LQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH---LHESCVLSLKF 273 (337)
T ss_dssp TTSEEEEEETTTTEE----EEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-EC---CCSSCEEEEEE
T ss_pred cCCcEEEEECCCCce----Eeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec---CCccceeEEEE
Confidence 689999999876431 1112 234578999999999999999999999999998877543 22 35577889999
Q ss_pred CCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeec
Q 021669 237 SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 237 sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~ 298 (309)
+|++++|++++.||.|++||+.+++.+.. ..|...+.+++|+|++++|++++.|..+.+|+
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 99999999999999999999999887754 45788999999999999999999885444444
No 32
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-39 Score=290.88 Aligned_cols=278 Identities=15% Similarity=0.199 Sum_probs=232.1
Q ss_pred cCCCcceEEEEeCCCCC-EEEEeeCCCcEEEEEc----CCCc------eeeeeec----------cccceeEEEEecCCC
Q 021669 8 RDYNGRISSMDFHKSSS-YLVTASDDESIRLYDV----TAAT------CLKTINS----------KKYGVDLVCFTSHPT 66 (309)
Q Consensus 8 ~~h~~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~ 66 (309)
..|.++|.+++|+|+++ +||+|+.|++|++||+ .+++ ....+.. |...|..++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34669999999999999 9999999999999999 8887 3444443 566899999999999
Q ss_pred EEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC------
Q 021669 67 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------ 140 (309)
Q Consensus 67 ~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~------ 140 (309)
.+++++. |+.|++|| .+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+....
T Consensus 122 ~l~~~~~---dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 122 SIVTGVE---NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEEET---TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEEeC---CCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 9988864 78999999 6778889999999999999999999999999999999999999888766554322
Q ss_pred -----------ceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEE
Q 021669 141 -----------RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHV 209 (309)
Q Consensus 141 -----------~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i 209 (309)
.....+.+++.+++++.++.|++||++..+. ...+..+...+.+++++|+++++++++.|+.|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTP----TGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRI 273 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSC----SEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCce----eeeeccCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2234455667788888899999999886432 2344466678999999999999999999999999
Q ss_pred EECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEcc
Q 021669 210 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 210 ~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~ 289 (309)
||+.+++.+..+. .+...+..++|+|++ ++++++.|+.|++||+.+++.+..+..|...+.+++|+|++++|++++
T Consensus 274 ~d~~~~~~~~~~~---~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 274 WHGGNGNSQNCFY---GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp ECSSSBSCSEEEC---CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred EECCCCccceEec---CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 9999888777664 355678899999999 999999999999999999999999999999999999999999999999
Q ss_pred ce--EEEeee
Q 021669 290 SE--LSFWIP 297 (309)
Q Consensus 290 ~d--~~~~~~ 297 (309)
.| +++|..
T Consensus 350 ~dg~i~i~~~ 359 (425)
T 1r5m_A 350 MDGQVNVYDL 359 (425)
T ss_dssp TTSCEEEEEC
T ss_pred CCCeEEEEEC
Confidence 87 555544
No 33
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-40 Score=288.73 Aligned_cols=248 Identities=14% Similarity=0.184 Sum_probs=191.5
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc--eeeeeeccccceeEEEEec--CCCEEEEEcCCCCCcee
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDESL 80 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~~~~~s~~g~d~~i 80 (309)
+.+.+|++.|++++|+|+|++|||||.|++|+|||+.++. ++.++.+|...|..++|++ +++.+++++. |++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~---D~~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY---DRKV 83 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET---TSCE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC---CCEE
Confidence 4457999999999999999999999999999999998764 4678899999999999976 3778887764 8999
Q ss_pred EEEEccCCc--eEEEeeecccCEEEEEecCC--CCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEE
Q 021669 81 RLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA 156 (309)
Q Consensus 81 ~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
++||+++++ .+..+.+|.+.|++++|+|+ +.+|++++.|++|++||++.+........
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~------------------ 145 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKI------------------ 145 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCB------------------
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeee------------------
Confidence 999998874 56778899999999999997 78999999999999999876521111000
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC-----------------CCEEEEEeCCCcEEEEECCCCe---
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-----------------GRLMLLTTMEGHIHVLDSFRGT--- 216 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-----------------g~~l~~~~~dg~v~i~d~~~~~--- 216 (309)
..++...+.+++|+|+ +++|++++.|++|++||...+.
T Consensus 146 ----------------------~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 203 (316)
T 3bg1_A 146 ----------------------NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK 203 (316)
T ss_dssp ----------------------TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred ----------------------eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc
Confidence 0011122333444443 5789999999999999987542
Q ss_pred EeEEeeecCCCCCccceEEECCCC----CEEEEEcCCCcEEEEECCCC---c-eEEEeecCCCCCcEEEECCCeeEEEEc
Q 021669 217 LLSTYNVKPVSRNSTLEASFSPEG----MFVISGSGDGSVYAWSVRSG---K-EVASWMSFDTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~sp~g----~~l~s~s~Dg~i~vwd~~~~---~-~~~~~~~~~~~v~~l~~~p~~~~l~s~ 288 (309)
.+..+. .|...|.+++|+|++ ++|++|+.|++|++||+.+. + ....+..|...|.+++|+|++++|+++
T Consensus 204 ~~~~l~---~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 204 EEQKLE---AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp EEECCB---CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred eeeecc---cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 333333 466789999999987 89999999999999999763 1 233456788999999999999999999
Q ss_pred cce--EEEeeec
Q 021669 289 SSE--LSFWIPD 298 (309)
Q Consensus 289 ~~d--~~~~~~~ 298 (309)
+.| +++|...
T Consensus 281 ~~D~~v~lw~~~ 292 (316)
T 3bg1_A 281 GGDNKVTLWKES 292 (316)
T ss_dssp ESSSCEEEEEEC
T ss_pred cCCCeEEEEEEC
Confidence 988 6667654
No 34
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-38 Score=279.38 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=206.2
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc----eeeeeeccccceeEEEEecCCCEEEEEcCCCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT----CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 77 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d 77 (309)
+....+..|...|.+++|+|++++|++|+.|+++++||+.+++ ....+.+|...+.++.|++++. +++++. |
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~---d 163 (340)
T 1got_B 88 NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG---D 163 (340)
T ss_dssp CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEET---T
T ss_pred CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEEC---C
Confidence 3456788999999999999999999999999999999998653 4566788888899999988764 666553 8
Q ss_pred ceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEE
Q 021669 78 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAV 155 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 155 (309)
++|++||+++++.+..+.+|.+.|.+++|+|++++|++++.|++|++||++++++...+..+. .....+.+++.++++
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 243 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEE
Confidence 899999999999999999999999999999999999999999999999999888776664332 345677777765555
Q ss_pred -EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceE
Q 021669 156 -AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 234 (309)
Q Consensus 156 -~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
+.|+.|++||++... ....+........+.+++|+|+|+++++++.|+.|++||..++..+..+. .|...+.++
T Consensus 244 ~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~---~h~~~v~~~ 318 (340)
T 1got_B 244 GSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA---GHDNRVSCL 318 (340)
T ss_dssp EETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEE
T ss_pred EcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee---cCCCcEEEE
Confidence 468999999997643 11222222333468999999999999999999999999999988887765 366789999
Q ss_pred EECCCCCEEEEEcCCCcEEEEE
Q 021669 235 SFSPEGMFVISGSGDGSVYAWS 256 (309)
Q Consensus 235 ~~sp~g~~l~s~s~Dg~i~vwd 256 (309)
+|+|+|++|+|||.|++|+|||
T Consensus 319 ~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 319 GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999997
No 35
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.1e-39 Score=282.65 Aligned_cols=283 Identities=13% Similarity=0.141 Sum_probs=233.3
Q ss_pred CccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc---eeeeeeccccceeEEEEecCCC-EEEEEcCCCC
Q 021669 1 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPT-TVIYSSKNGW 76 (309)
Q Consensus 1 ~~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~~~~~s~~g~ 76 (309)
|+......+|++.|++++|+|++++|++++.|++|+|||+.+++ ....+..|...+..++|+++++ .+++++.
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--- 77 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV--- 77 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---
T ss_pred CcceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---
Confidence 44555667999999999999999999999999999999998776 3455668888999999999999 8888764
Q ss_pred CceeEEEEc-cCCceEEEeee--cccCEEEEEecCCCCeEEEecCCCcEEEeeCCC---------ceeeeeeeecC-cee
Q 021669 77 DESLRLLSL-HDNKYLRYFKG--HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA---------EKCQGLLRVQG-RPA 143 (309)
Q Consensus 77 d~~i~~~d~-~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~---------~~~~~~~~~~~-~~~ 143 (309)
|+.|++||+ ++++. ..+.+ |...|.+++|+| ++.|++++.|+.|++||+++ .++...+.... ...
T Consensus 78 dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (342)
T 1yfq_A 78 QGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFT 155 (342)
T ss_dssp TSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEE
T ss_pred CCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEE
Confidence 789999999 77754 77888 999999999999 99999999999999999887 65554444322 233
Q ss_pred EEECCCCcEEEEEECCEEEEEECCC-CCcCCceEEEeCCCCCCCeEEEEcc-CCCEEEEEeCCCcEEEEECCCC------
Q 021669 144 AAYDDQGLVFAVAFGGYIRMFDARK-YEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRG------ 215 (309)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~l~~~~~dg~v~i~d~~~~------ 215 (309)
+.+.+++ +++++.++.|++||++. .... . ......+...+.+++++| +++++++++.||.|++||....
T Consensus 156 ~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~-~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 156 MDTNSSR-LIVGMNNSQVQWFRLPLCEDDN-G-TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp EEECSSE-EEEEESTTEEEEEESSCCTTCC-C-EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC
T ss_pred EEecCCc-EEEEeCCCeEEEEECCcccccc-c-eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccc
Confidence 4555555 77777899999999986 4321 1 122334556789999999 9999999999999999998776
Q ss_pred eEeEEeeecCC------CCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecC-CCCCcEEEECCCeeEEEEc
Q 021669 216 TLLSTYNVKPV------SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF-DTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 216 ~~~~~~~~~~~------~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~~p~~~~l~s~ 288 (309)
.....+..+.. +...+.+++|+|++++|++++.||.|++||+.+++.+..+..| ...|.+++ |++++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEE
Confidence 66666654321 2337889999999999999999999999999999999999988 99999999 999999999
Q ss_pred cceEE
Q 021669 289 SSELS 293 (309)
Q Consensus 289 ~~d~~ 293 (309)
+.|..
T Consensus 311 s~Dg~ 315 (342)
T 1yfq_A 311 TSDDT 315 (342)
T ss_dssp EECTH
T ss_pred ecCCc
Confidence 99865
No 36
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-40 Score=292.26 Aligned_cols=282 Identities=15% Similarity=0.225 Sum_probs=229.5
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCC----CceeeeeeccccceeEEEEecC-CCEEEEEcCCCCCceeEEE
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSH-PTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~s~~g~d~~i~~~ 83 (309)
.|...|.+++|+|++++|++|+.|++|++||+.+ .+++..+..|...|..++|+|+ +..+++++. |+.|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN---NGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS---SSCEEBC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC---CCeEEEE
Confidence 5899999999999999999999999999999987 4578889999999999999998 777777754 8899999
Q ss_pred EccCCc------eEE---EeeecccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCceeeeeeeec------C--ceeEE
Q 021669 84 SLHDNK------YLR---YFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQ------G--RPAAA 145 (309)
Q Consensus 84 d~~~~~------~~~---~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~------~--~~~~~ 145 (309)
|+.+++ ... .+.+|...|.+++|+|+ ++.|++++.|+.|++||++++++...+... . ...+.
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 998876 322 34689999999999998 789999999999999999998877666543 1 23456
Q ss_pred ECCCC-cEEE-EEECC---EEEEEECCCCCcCCceEEEeC-CCCCCCeEEEEcc-CCCEEEEEeCCCcEEEEECCCCeEe
Q 021669 146 YDDQG-LVFA-VAFGG---YIRMFDARKYEKGPFDIFSVG-GDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLL 218 (309)
Q Consensus 146 ~~~~~-~~~~-~~~~~---~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~v~~s~-dg~~l~~~~~dg~v~i~d~~~~~~~ 218 (309)
+.+++ .+++ ++.++ .|++||++..... ...+. ++...+.+++|+| +++++++++.||.|++||+.+++.+
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTP---LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSC---SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCC---cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 77765 4444 45566 9999999864321 22334 5667899999999 9999999999999999999999888
Q ss_pred EEeeecCCCCCccceEEECCCC-CEEEEEcCCCcEEEEECCCCceEEEee------------------------------
Q 021669 219 STYNVKPVSRNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASWM------------------------------ 267 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~sp~g-~~l~s~s~Dg~i~vwd~~~~~~~~~~~------------------------------ 267 (309)
..+.. |...+..++|+|++ ++|++++.|+.|++||+.+.+......
T Consensus 299 ~~~~~---~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (416)
T 2pm9_A 299 SQFPA---RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFH 375 (416)
T ss_dssp EEEEC---SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSC
T ss_pred eeecC---CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccc
Confidence 87763 45678899999999 899999999999999998765432211
Q ss_pred -----cCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 268 -----SFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 268 -----~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
.|...+.+++|+|+|++|++++.|..+.+|++
T Consensus 376 ~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 376 LQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp CCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred ccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 15667789999999999999998844444443
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.4e-39 Score=283.30 Aligned_cols=286 Identities=14% Similarity=0.216 Sum_probs=227.5
Q ss_pred ecCCCcceEEEEeCCC----CCEEEEeeCCCcEEEEEcCCCceeeeeeccc-----cceeEEEEecC----CCEEEEEcC
Q 021669 7 FRDYNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATCLKTINSKK-----YGVDLVCFTSH----PTTVIYSSK 73 (309)
Q Consensus 7 ~~~h~~~V~~i~~s~~----~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~-----~~v~~~~~~~~----~~~~~~~s~ 73 (309)
..+|+++|.+++|+|+ ...+++++.|+.|++||+.+++.++.+..+. ..+..++|+++ +..+++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4489999999999984 4566666677799999999888887776543 56999999998 446776654
Q ss_pred CCCCceeEEEEccCCceEEEeeecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCCceeeeeee---ec--CceeEEEC
Q 021669 74 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLR---VQ--GRPAAAYD 147 (309)
Q Consensus 74 ~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~---~~--~~~~~~~~ 147 (309)
|+.|++||+.+++.+..+.+|...|.+++|+| +++.|++++.||+|++||+++++....+. .. ....+.+.
T Consensus 94 ---dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 94 ---RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp ---TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred ---CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 88999999999999999999999999999999 89999999999999999999888776652 12 23345677
Q ss_pred CCCcEEE-EEECCEEEEEECCCCCcCC------------------------ceEEEeCCCCCCCeEEEEccCCCEEEEEe
Q 021669 148 DQGLVFA-VAFGGYIRMFDARKYEKGP------------------------FDIFSVGGDISDANVVKFSNDGRLMLLTT 202 (309)
Q Consensus 148 ~~~~~~~-~~~~~~i~~~d~~~~~~~~------------------------~~~~~~~~~~~~~~~v~~s~dg~~l~~~~ 202 (309)
+++..++ ++.|+.|++||++..+... .......++...+.+++|+ ++++++++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~ 248 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS 248 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe
Confidence 7665554 5568999999987532100 0112233366789999998 78999999
Q ss_pred CCCcEEEEECCCCeE--------------eEEeeecCCCCCccceEEECCC--CCEEEEEcCCCcEEEEECCCCce----
Q 021669 203 MEGHIHVLDSFRGTL--------------LSTYNVKPVSRNSTLEASFSPE--GMFVISGSGDGSVYAWSVRSGKE---- 262 (309)
Q Consensus 203 ~dg~v~i~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~sp~--g~~l~s~s~Dg~i~vwd~~~~~~---- 262 (309)
.|+.|++||+.++.. +..+. .+...+..++|+|+ +++|++|+.||.|++||+.+++.
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD---YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE---CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE
T ss_pred cCCEEEEEeCCCccccccccccCCcchheecccc---ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc
Confidence 999999999877643 44443 34567888999999 99999999999999999998764
Q ss_pred EEEeecC--CCCCcEEEECCCeeEEEEccceEEEeeecCC
Q 021669 263 VASWMSF--DTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 300 (309)
Q Consensus 263 ~~~~~~~--~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~~ 300 (309)
...+..| ...|.+++|+|++++|++++.|..+.+|++.
T Consensus 326 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 3467777 7899999999999999999999777777653
No 38
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=287.85 Aligned_cols=282 Identities=17% Similarity=0.271 Sum_probs=216.1
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc-----------eeeeeeccc------------cceeEEEEecCC-
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-----------CLKTINSKK------------YGVDLVCFTSHP- 65 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~- 65 (309)
|.+.|++++|+|+|++||+|+.|++|+|||+.+++ +...+.+|. ..|..++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999999877 577888887 779999999998
Q ss_pred -CEEEEEcCCCCCceeEEEEccCCceE---------------------------------------EE-eeecccCEEEE
Q 021669 66 -TTVIYSSKNGWDESLRLLSLHDNKYL---------------------------------------RY-FKGHHDRVVSL 104 (309)
Q Consensus 66 -~~~~~~s~~g~d~~i~~~d~~~~~~~---------------------------------------~~-~~~h~~~v~~v 104 (309)
..+++++. |++|++||+.+++.. +. ..+|...|.++
T Consensus 107 ~~~l~s~s~---d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 107 AAQFLLSTN---DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SSEEEEEEC---SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred cceEEEeCC---CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 67777754 899999999764432 12 36899999999
Q ss_pred EecCCCCeEEEecCCCcEEEeeCCC-ceeeeee-------eec--CceeEEECCCC-c-EEEEEECCEEEEEECCCCCcC
Q 021669 105 SLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLL-------RVQ--GRPAAAYDDQG-L-VFAVAFGGYIRMFDARKYEKG 172 (309)
Q Consensus 105 ~~~~~~~~l~s~s~Dg~v~~Wd~~~-~~~~~~~-------~~~--~~~~~~~~~~~-~-~~~~~~~~~i~~~d~~~~~~~ 172 (309)
+|+|++++|++| .|++|++||+++ .++...+ ... ....+.+.+++ . +++++.|+.|++||++.....
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 799999999984 4343322 111 13356777775 4 555556899999999875432
Q ss_pred CceEEEeCCCCC------------CCeEEEEccCCCEEEEEeCCCcEEEEECCC-CeEeEEeeecCCCCC---------c
Q 021669 173 PFDIFSVGGDIS------------DANVVKFSNDGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRN---------S 230 (309)
Q Consensus 173 ~~~~~~~~~~~~------------~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~-~~~~~~~~~~~~~~~---------~ 230 (309)
......+..+.. .+.+++|+|+|++|++++. +.|++||+.+ +..+..+..+..... .
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 111233444443 7999999999999999999 9999999987 777766654321111 1
Q ss_pred ---cceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEee---------------------------------cCCCCCc
Q 021669 231 ---TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM---------------------------------SFDTEPP 274 (309)
Q Consensus 231 ---~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~---------------------------------~~~~~v~ 274 (309)
+..++|+|++++|++|+.||.|++||+.+++.+. +. .++..+.
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 2248999999999999999999999999887653 21 3356788
Q ss_pred EEEECCCeeEEEEccce-EEEeee
Q 021669 275 VIKWTPGSLMFVTGSSE-LSFWIP 297 (309)
Q Consensus 275 ~l~~~p~~~~l~s~~~d-~~~~~~ 297 (309)
+++|+|++++|++++.+ +++|..
T Consensus 421 ~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 421 HTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp EEEECSSSSEEEEECSSCEEEEEC
T ss_pred EEEECCCCCEEEEEecceeeeecc
Confidence 99999999999998876 677653
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5e-39 Score=283.24 Aligned_cols=291 Identities=14% Similarity=0.141 Sum_probs=233.9
Q ss_pred EecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc--eeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 6 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 6 ~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
.+..|.++|.+++|+|++++|++++.|++|++||+.+++ ++..+.+|...+..++|+|+++.+++++. |+.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEEE
Confidence 456699999999999999999999999999999999887 88999999999999999999999988764 8899999
Q ss_pred EccCCceEEE--eeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceee---eeeee---cCceeEEECCCCcEEEE
Q 021669 84 SLHDNKYLRY--FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ---GLLRV---QGRPAAAYDDQGLVFAV 155 (309)
Q Consensus 84 d~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~ 155 (309)
|+++++.... +.+|...|.+++|+|++++|++++.|+.|++||++..... ..+.. .......+.+++.++++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 9998875444 4679999999999999999999999999999998876521 11111 12335667777765555
Q ss_pred -EECCEEEEEECCCCC--------------cCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEE
Q 021669 156 -AFGGYIRMFDARKYE--------------KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 220 (309)
Q Consensus 156 -~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~ 220 (309)
+.|+.|++||++... .....+..+..+...+.+++|+|+++++++++.|+.|++||+.+++.+..
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 468999999975211 01122445556777899999999999999999999999999999998887
Q ss_pred eeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC--Cce--------------------------------E---
Q 021669 221 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS--GKE--------------------------------V--- 263 (309)
Q Consensus 221 ~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~--~~~--------------------------------~--- 263 (309)
+.. +...+..++|+|+++++++| .|+.|++|++.+ ++. .
T Consensus 240 ~~~---~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (372)
T 1k8k_C 240 LAS---ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 315 (372)
T ss_dssp EEC---SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC------
T ss_pred Ecc---CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCc
Confidence 763 45678899999999998888 899999999987 421 0
Q ss_pred ---EEe-ecCCCCCcEEEEC-CCe---eEEEEccceEEEeeecCCCcc
Q 021669 264 ---ASW-MSFDTEPPVIKWT-PGS---LMFVTGSSELSFWIPDLSKLG 303 (309)
Q Consensus 264 ---~~~-~~~~~~v~~l~~~-p~~---~~l~s~~~d~~~~~~~~~~~~ 303 (309)
..+ .+|...|++++|+ +++ ++|++++.|..+.+|++..+.
T Consensus 316 ~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 316 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 223 3899999999976 566 999999999666666654443
No 40
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5e-39 Score=290.73 Aligned_cols=292 Identities=15% Similarity=0.170 Sum_probs=218.7
Q ss_pred cceEecCCCcceEEEEeCC-CCCEEEEeeCCCcEEEEEcCCCcee--eeeeccccceeEEEEec-CCCEEEEEcCCCCCc
Q 021669 3 VGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCL--KTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDE 78 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~s~~g~d~ 78 (309)
+......|...|++|+|+| ++++||+|+.||+|+|||+.+++.. ..+.+|...|.+++|+| ++..+++++. |+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~---D~ 187 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM---EG 187 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS---SS
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC---CC
Confidence 4556678999999999999 5679999999999999999876544 45668889999999998 5778887754 89
Q ss_pred eeEEEEccCCceEEEeee--cccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCC-cEE
Q 021669 79 SLRLLSLHDNKYLRYFKG--HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQG-LVF 153 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~-~~~ 153 (309)
+|++||++++........ +...+.+++|+|++++|++|+.||+|++||++... ...+..+. ...+.+.+.+ .++
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCSBCCSSCEEEEEECTTCSSEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEEecccceEEeeeecCCCceEE
Confidence 999999987654333333 33457889999999999999999999999986543 33333222 2345666654 355
Q ss_pred E-EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC---CC
Q 021669 154 A-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS---RN 229 (309)
Q Consensus 154 ~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~---~~ 229 (309)
+ ++.|+.|++||++..+... ......+|...|.+++|+|+|++|++++.||.|++||+.++.....+..+... ..
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 345 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKA-SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHL 345 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSS-CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSS
T ss_pred EEecCcceeeEEecccccccc-eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccc
Confidence 4 5568999999998754321 12233456678999999999999999999999999999988776655432211 12
Q ss_pred ccceEEECCCCCEEEEEc------------CCCcEEEEECCCCceEEEee-cCCCCCcEE-EECCCeeEEEEccce-EEE
Q 021669 230 STLEASFSPEGMFVISGS------------GDGSVYAWSVRSGKEVASWM-SFDTEPPVI-KWTPGSLMFVTGSSE-LSF 294 (309)
Q Consensus 230 ~~~~~~~sp~g~~l~s~s------------~Dg~i~vwd~~~~~~~~~~~-~~~~~v~~l-~~~p~~~~l~s~~~d-~~~ 294 (309)
.+..+.|+|++..+++++ .++.|++||+.+++.+..+. +|...|.++ +|+|++++|++|+.+ +++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~i 425 (435)
T 4e54_B 346 TPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILI 425 (435)
T ss_dssp CCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEE
T ss_pred eeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEE
Confidence 234567888777777664 33589999999999888764 688888887 699999999998744 555
Q ss_pred eeecC
Q 021669 295 WIPDL 299 (309)
Q Consensus 295 ~~~~~ 299 (309)
|.++-
T Consensus 426 W~~~~ 430 (435)
T 4e54_B 426 WSQQE 430 (435)
T ss_dssp CCCC-
T ss_pred EECCc
Confidence 55543
No 41
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.5e-39 Score=282.85 Aligned_cols=247 Identities=16% Similarity=0.241 Sum_probs=195.3
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeee----eeccccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT----INSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
....+|.+.|.+++|+|++. +++++.|++|+|||+.++++... ..+|...|.+++|+|+++.+++++. |++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg~v 163 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DFSV 163 (357)
T ss_dssp SEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET---TSCE
T ss_pred cccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC---CCeE
Confidence 44567999999999999875 55788999999999998876533 3467888999999999999998864 8899
Q ss_pred EEEEccCCceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeeecC----ceeEEECCC-CcEEE
Q 021669 81 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQG----RPAAAYDDQ-GLVFA 154 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~ 154 (309)
++||+++++.+..+.+|.+.|++++|++++. .+++++.|++|++||++++++...+.... ...+.+.|+ +.+++
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 9999999999999999999999999999875 78999999999999999887765543322 234566654 45565
Q ss_pred E-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC-CEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccc
Q 021669 155 V-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 232 (309)
Q Consensus 155 ~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~ 232 (309)
+ +.|+.|++||+++.+. ...+.++...+.+++|+|++ ++|++++.|++|+|||+.+++++..+ .|...|.
T Consensus 244 ~g~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----~H~~~V~ 315 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDS----AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----SHRDFVT 315 (357)
T ss_dssp EEESSSCEEEEESSCGGG----CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----CCSSCEE
T ss_pred EeecccceeEEECCCCcE----eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----CCCCCEE
Confidence 5 4689999999986432 34566777889999999997 57899999999999999999877654 3667899
Q ss_pred eEEECC-CCCEEEEEcCCCcEEEEECCCCceE
Q 021669 233 EASFSP-EGMFVISGSGDGSVYAWSVRSGKEV 263 (309)
Q Consensus 233 ~~~~sp-~g~~l~s~s~Dg~i~vwd~~~~~~~ 263 (309)
+++|+| |+++|+|||.||+|++|++.+....
T Consensus 316 ~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 316 GVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 999999 8999999999999999999765443
No 42
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.1e-38 Score=303.63 Aligned_cols=287 Identities=17% Similarity=0.253 Sum_probs=243.1
Q ss_pred CccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 1 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 1 ~~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
+++.++|.+|++.|.+++|+|++++||+|+.|++|+|||+.++++++.+..|..+|..++|+|+++.+++++. |+.|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i 79 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRI 79 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEE
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC---CCeE
Confidence 4677899999999999999999999999999999999999999999999999999999999999999998865 8899
Q ss_pred EEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCc-eeeeeeeecC--ceeEEECC-CCc-EEEE
Q 021669 81 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQG--RPAAAYDD-QGL-VFAV 155 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~-~~~~~~~~~~--~~~~~~~~-~~~-~~~~ 155 (309)
++||+.+++.+..+.+|.+.|++++|+|++++|++++.||+|++||++++ .....+..+. .....+.+ ++. ++++
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999876 4444443222 23456666 554 5555
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc--CCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~--dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
+.|+.|++||++.... . ......+...+..++++| ++.++++++.||.|++||..++..+..+.. +...+..
T Consensus 160 ~~dg~v~vwd~~~~~~-~--~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~v~~ 233 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTP-N--FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---HMSNVSF 233 (814)
T ss_dssp ETTSEEEEEETTCSSC-S--EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC---CSSCEEE
T ss_pred eCCCeEEEEECCCCcc-e--eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC---CCCCEEE
Confidence 5689999999875432 1 112223346789999999 999999999999999999999988877653 4567889
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCee--EEEEccce-EEEee
Q 021669 234 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL--MFVTGSSE-LSFWI 296 (309)
Q Consensus 234 ~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~--~l~s~~~d-~~~~~ 296 (309)
++|+|+|+++++++.||.|++||+.+++.+..+..|...+.+++|+|+++ ++++++.+ ..+|.
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999986 45555543 44443
No 43
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3e-38 Score=279.41 Aligned_cols=284 Identities=10% Similarity=0.079 Sum_probs=213.2
Q ss_pred cceEEEEeCCCCCEEEEeeCCC-------cEEEEEcCCCcee----------eeeeccccceeEEEEecCCCEEEEEcCC
Q 021669 12 GRISSMDFHKSSSYLVTASDDE-------SIRLYDVTAATCL----------KTINSKKYGVDLVCFTSHPTTVIYSSKN 74 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~-------~v~iWd~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 74 (309)
-+|.+++|+||+++||+||.|. .|++|++..+... ..+..+...+.+++ ++++.++++...
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~--~~~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAID--ASKGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEE--EETTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEE--eCCCEEEEEECC
Confidence 4899999999999999998654 5999999754321 13445555565554 456667665422
Q ss_pred --------CCCceeEEEEccCCce-EEE--------eeecccCEEEEEecCCCCeEE--EecCCCcEEEeeCCCceeeee
Q 021669 75 --------GWDESLRLLSLHDNKY-LRY--------FKGHHDRVVSLSLCSSKDCFI--SGSLDRTVLLWDQRAEKCQGL 135 (309)
Q Consensus 75 --------g~d~~i~~~d~~~~~~-~~~--------~~~h~~~v~~v~~~~~~~~l~--s~s~Dg~v~~Wd~~~~~~~~~ 135 (309)
+.|+++|+|++...+. +.. ...+...++.++|+|||++++ +++.|++|++||+++.++...
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 2478999999876542 211 123455699999999999876 555899999999999888776
Q ss_pred eeecC-ceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCC----cEEEE
Q 021669 136 LRVQG-RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG----HIHVL 210 (309)
Q Consensus 136 ~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg----~v~i~ 210 (309)
+.... ...+.++|++.+++.+.++.+.+|+...... ........+...+.+++|+|+|+++++++.|+ .+++|
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccceeEEEEEeccCcc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 65433 3457889999999988888888888765321 11223344556789999999999999999887 68889
Q ss_pred ECCCCeEeEE-eeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe-ecCCCCCcEEEECCCeeEEEEc
Q 021669 211 DSFRGTLLST-YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW-MSFDTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 211 d~~~~~~~~~-~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~-~~~~~~v~~l~~~p~~~~l~s~ 288 (309)
|......... ......+...|.+++|||||++||+|+.|++|+|||+.+++++.++ .+|...|++|+|+||+++|+||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 8876543221 1111235577889999999999999999999999999999999885 6899999999999999999999
Q ss_pred cceEEEeeecC
Q 021669 289 SSELSFWIPDL 299 (309)
Q Consensus 289 ~~d~~~~~~~~ 299 (309)
+.|..+.+|++
T Consensus 331 S~D~tvrvw~i 341 (365)
T 4h5i_A 331 SAANTIHIIKL 341 (365)
T ss_dssp ETTSEEEEEEC
T ss_pred eCCCeEEEEEc
Confidence 99944444443
No 44
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-38 Score=273.26 Aligned_cols=248 Identities=17% Similarity=0.282 Sum_probs=204.6
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
..++|++|...|.+++|+|++++|+||+.|++|||||+.++++++.+.+|...|..++|++++..+++++. |++|++
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~v 133 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR---DKTIKV 133 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET---TSCEEE
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC---CCeEEE
Confidence 35678999999999999999999999999999999999999999999999999999999999999998875 889999
Q ss_pred EEccCCceEEEeeecccCEEEEEecCC------CCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEE
Q 021669 83 LSLHDNKYLRYFKGHHDRVVSLSLCSS------KDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA 154 (309)
Q Consensus 83 ~d~~~~~~~~~~~~h~~~v~~v~~~~~------~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 154 (309)
||++ ++.+..+.+|.+.|.++.++|. +..|++++.|++|++||+++.+....+..+. ...+.+++++.+++
T Consensus 134 wd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 212 (319)
T 3frx_A 134 WTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIA 212 (319)
T ss_dssp EETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEE
T ss_pred EECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEE
Confidence 9996 4678889999999999999984 4489999999999999999887665543322 34567788776655
Q ss_pred E-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeec-----CCCC
Q 021669 155 V-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-----PVSR 228 (309)
Q Consensus 155 ~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-----~~~~ 228 (309)
+ +.|+.|++||++..+ .+..+.. ...+.+++|+|++.++++++.+ .+++|+...+..+..+... ..+.
T Consensus 213 s~~~dg~i~iwd~~~~~----~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
T 3frx_A 213 SAGKDGEIMLWNLAAKK----AMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAE 286 (319)
T ss_dssp EEETTCEEEEEETTTTE----EEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGC
T ss_pred EEeCCCeEEEEECCCCc----EEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcC
Confidence 5 568999999987643 1233332 3578999999999999888755 5999999887766655321 1123
Q ss_pred CccceEEECCCCCEEEEEcCCCcEEEEECCCC
Q 021669 229 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~ 260 (309)
..+.+++|+|||++|++|+.|+.|++||+.++
T Consensus 287 ~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 287 PHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 45778999999999999999999999999764
No 45
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-39 Score=288.95 Aligned_cols=286 Identities=14% Similarity=0.202 Sum_probs=224.1
Q ss_pred ccceEe-cCCCcceEEEEeCC-CCCEEEEeeCCCcEEEEEcCC---Cceee-eee-ccccceeEEEEecCCCEEEEEcCC
Q 021669 2 EVGMSF-RDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTA---ATCLK-TIN-SKKYGVDLVCFTSHPTTVIYSSKN 74 (309)
Q Consensus 2 ~~~~~~-~~h~~~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~---~~~~~-~~~-~~~~~v~~~~~~~~~~~~~~~s~~ 74 (309)
+++.+| .+|.+.|++++|+| ++++||||+.|++|+|||+.+ +.+.+ .+. .|...|.+++|++++..+++++.
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~- 131 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK- 131 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET-
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC-
Confidence 456788 89999999999999 999999999999999999976 44322 222 47888999999999999988865
Q ss_pred CCCceeEEEEcc---CCceEEEeeec------------ccCEEEEE--ecCCCCeEEEecCCCcEEEeeCCCceeeeeee
Q 021669 75 GWDESLRLLSLH---DNKYLRYFKGH------------HDRVVSLS--LCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR 137 (309)
Q Consensus 75 g~d~~i~~~d~~---~~~~~~~~~~h------------~~~v~~v~--~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~ 137 (309)
|++|++||++ +++.+..+.+| ...+.++. ++++++.|++++.|++|++||++++++...+.
T Consensus 132 --dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 132 --DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp --TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred --CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 8899999995 66666655544 34455555 44678899999999999999999988877765
Q ss_pred e----cCceeEEECCCCcEEE-EEECCEEEEEECCCCCcCCceEEEeC-CCCCCCeEEEE----ccCCCEEEEEeCCCcE
Q 021669 138 V----QGRPAAAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVG-GDISDANVVKF----SNDGRLMLLTTMEGHI 207 (309)
Q Consensus 138 ~----~~~~~~~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~v~~----s~dg~~l~~~~~dg~v 207 (309)
. .....+.+++++.+++ ++.|+.|++||++..+ .+..+. .+...+.++++ +|++.++++++.||.|
T Consensus 210 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 210 NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV----LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE----EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc----EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 4 1234566777776555 4568999999998632 122322 34457888854 5678899999999999
Q ss_pred EEEECCCCeEeEEeeecC-----------------------CCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEE
Q 021669 208 HVLDSFRGTLLSTYNVKP-----------------------VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA 264 (309)
Q Consensus 208 ~i~d~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~ 264 (309)
++||+.+++.+..+..+. .+...+.+++|+ ++++|++|+.|+.|++||+.+++.+.
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 999999999888776321 144567889999 78999999999999999999988777
Q ss_pred Eeec-------------------------------------CCCCCcEEEECCC--eeEEEEccce--EEEe
Q 021669 265 SWMS-------------------------------------FDTEPPVIKWTPG--SLMFVTGSSE--LSFW 295 (309)
Q Consensus 265 ~~~~-------------------------------------~~~~v~~l~~~p~--~~~l~s~~~d--~~~~ 295 (309)
.+.+ |...|++++|+++ +.+|++|+.| +++|
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEE
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEe
Confidence 6655 8889999999998 8899999998 5555
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-38 Score=283.85 Aligned_cols=281 Identities=13% Similarity=0.149 Sum_probs=222.2
Q ss_pred ecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc
Q 021669 7 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 86 (309)
Q Consensus 7 ~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~ 86 (309)
+..| ..+....|+|++++|++|+.|++|++||+.++++.+.+..|...|..++|+|+++.+++++. |++|++||+.
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~ 169 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ---DMQLKIWSVK 169 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET---TSEEEEEETT
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC---CCeEEEEeCC
Confidence 3444 44555678999999999999999999999999999988999999999999999998888764 8899999999
Q ss_pred CCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC-----c--------------------
Q 021669 87 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-----R-------------------- 141 (309)
Q Consensus 87 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~-----~-------------------- 141 (309)
+++.+..+.+|.+.|.+++|+|+++.|++++.|++|++||++++++...+.... .
T Consensus 170 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 170 DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 999999999999999999999999999999999999999999888776654311 0
Q ss_pred -eeEEECCCCcEEEE-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCC-EEEEEeCCCcEEEEECCCCeE-
Q 021669 142 -PAAAYDDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTL- 217 (309)
Q Consensus 142 -~~~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~dg~v~i~d~~~~~~- 217 (309)
....+++++.++++ +.++.|++||++..+. .......+...+.+++|+|+++ ++++++.||.|++||+.++..
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~ 326 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ---TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP 326 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTCCE---EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCCce---eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc
Confidence 11223456655554 4689999999976432 1222334567899999999999 999999999999999988743
Q ss_pred eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCc---------eEEEeecCCCCCcEEEECCCee----E
Q 021669 218 LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK---------EVASWMSFDTEPPVIKWTPGSL----M 284 (309)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~---------~~~~~~~~~~~v~~l~~~p~~~----~ 284 (309)
+..+..+ +...+..+ ++|++++|++++.|+.|++||+.+.+ ....+..|...+.+++|+|+++ +
T Consensus 327 ~~~~~~~--~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l 403 (420)
T 3vl1_A 327 VGEFLIN--EGTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEV 403 (420)
T ss_dssp SEEEEES--TTSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEE
T ss_pred hhhhhcc--CCCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceE
Confidence 5555432 33455555 55788999999999999999997732 2234567888999999999988 5
Q ss_pred EEEccce-EEEeee
Q 021669 285 FVTGSSE-LSFWIP 297 (309)
Q Consensus 285 l~s~~~d-~~~~~~ 297 (309)
+++|+.+ +.+|..
T Consensus 404 ~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 404 LEVGKNNFCALYNL 417 (420)
T ss_dssp EEEETTTEEEEEES
T ss_pred EEEcCCceEEEEec
Confidence 5555543 666654
No 47
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.1e-37 Score=268.99 Aligned_cols=247 Identities=13% Similarity=0.122 Sum_probs=208.3
Q ss_pred ceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEE
Q 021669 44 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 123 (309)
Q Consensus 44 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~ 123 (309)
+..+++.+|...|..++|+|+++.+++++. |++|++||+++++.+..+.+|...|.++.|+|++++|++|+.|++|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~---dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLY---SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 456788999999999999999999998864 89999999999999999999999999999999999999999999999
Q ss_pred EeeCCCceeeeeeeecC--ceeEEECCCCcEE-EEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc-CCCEEE
Q 021669 124 LWDQRAEKCQGLLRVQG--RPAAAYDDQGLVF-AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLML 199 (309)
Q Consensus 124 ~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~l~ 199 (309)
+||++++++...+..+. ...+.+.+++.++ +++.|+.|++||++... .....+.++...+.+++|+| ++..++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---ALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT---EEEEEECCCCSCEEEEEECTTCTTEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc---chhhhhcccCCcEEEEEECCCCCCEEE
Confidence 99999988776665433 3356677776554 45568999999987532 22345667888899999999 689999
Q ss_pred EEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECC--CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEE
Q 021669 200 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP--EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIK 277 (309)
Q Consensus 200 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp--~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 277 (309)
+++.|++|++||+.++.....+.. .+...+..++|+| ++++|++|+.|++|++||+++++++.++.+|...|.+++
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEEC--CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEeCCCeEEEEECCCCCccceecc--CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE
Confidence 999999999999987766554432 2345667788876 788999999999999999999999999999999999999
Q ss_pred ECCCeeEEEEccce--EEEeeec
Q 021669 278 WTPGSLMFVTGSSE--LSFWIPD 298 (309)
Q Consensus 278 ~~p~~~~l~s~~~d--~~~~~~~ 298 (309)
|+|++++|++|+.| +++|...
T Consensus 236 ~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 236 FHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999998 5666543
No 48
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.4e-38 Score=294.29 Aligned_cols=289 Identities=16% Similarity=0.205 Sum_probs=231.4
Q ss_pred cceEecCCCcceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCceeeeeecccc---ceeEEEEecC-CCEEEEEcCCCCC
Q 021669 3 VGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSH-PTTVIYSSKNGWD 77 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~s~~g~d 77 (309)
....+.+|.+.|.+++|+|+++ ++++++.|++|++||+.+++++..+..|.. .+..++|+|+ ++.+++++. |
T Consensus 152 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d 228 (615)
T 1pgu_A 152 SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS---D 228 (615)
T ss_dssp EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET---T
T ss_pred cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC---C
Confidence 4567889999999999999998 899999999999999999999999999988 8999999999 888888764 7
Q ss_pred ceeEEEEccCCceEEEe-e---ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC------ceeEE--
Q 021669 78 ESLRLLSLHDNKYLRYF-K---GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------RPAAA-- 145 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~-~---~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~------~~~~~-- 145 (309)
+.|++||+.+++.+..+ . +|...|.+++|+ ++++|++++.|+.|++||++++++...+.... .....
T Consensus 229 g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 229 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred CeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC
Confidence 89999999999999998 6 899999999999 99999999999999999998776554433220 00000
Q ss_pred ------------------------------------------------------------------------ECCCCcEE
Q 021669 146 ------------------------------------------------------------------------YDDQGLVF 153 (309)
Q Consensus 146 ------------------------------------------------------------------------~~~~~~~~ 153 (309)
+.+...++
T Consensus 308 ~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~ 387 (615)
T 1pgu_A 308 GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYS 387 (615)
T ss_dssp ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCE
T ss_pred CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEE
Confidence 11122333
Q ss_pred EEEECCEEEEEECCCCC-------------------------------------------------------------cC
Q 021669 154 AVAFGGYIRMFDARKYE-------------------------------------------------------------KG 172 (309)
Q Consensus 154 ~~~~~~~i~~~d~~~~~-------------------------------------------------------------~~ 172 (309)
+++.++.+++||++..+ .+
T Consensus 388 ~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~ 467 (615)
T 1pgu_A 388 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGN 467 (615)
T ss_dssp EEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTS
T ss_pred EEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCC
Confidence 33334444444432100 01
Q ss_pred CceE----------EEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECC----
Q 021669 173 PFDI----------FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP---- 238 (309)
Q Consensus 173 ~~~~----------~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp---- 238 (309)
.+.+ ....++...+.+++|+|+|++|++++.||.|++||+.+++.+..+.. .|...+.+++|+|
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA--FRTSKINAISWKPAEKG 545 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC--CCSSCEEEEEECCCC--
T ss_pred eEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeec--CCCCceeEEEEcCcccc
Confidence 1111 22344567889999999999999999999999999999988876542 2567899999999
Q ss_pred ------CCCEEEEEcCCCcEEEEECCCC-ceEEEeecCCCCCcEEEECCCeeEEEEccce--EEEeeec
Q 021669 239 ------EGMFVISGSGDGSVYAWSVRSG-KEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 298 (309)
Q Consensus 239 ------~g~~l~s~s~Dg~i~vwd~~~~-~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~ 298 (309)
++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+|+++ |++++.| +++|..+
T Consensus 546 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 546 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp ----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred ccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 9999999999999999999997 78888999999999999999999 9999988 5555443
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-39 Score=288.54 Aligned_cols=291 Identities=11% Similarity=0.087 Sum_probs=217.9
Q ss_pred CccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCC--ceeeeeeccccceeEEEEecCCCEEEEEcCCCCCc
Q 021669 1 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 78 (309)
Q Consensus 1 ~~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~ 78 (309)
|.....++.|.++|++++|+|++++||+|+.|++|+|||+.++ ++++.+.+|...|..++|+|+++.+++++. |+
T Consensus 1 m~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~ 77 (377)
T 3dwl_C 1 MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ---DR 77 (377)
T ss_dssp -CCEEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET---TS
T ss_pred CCcceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC---CC
Confidence 4455667778899999999999999999999999999999988 788999999999999999999999988874 88
Q ss_pred eeEEEEccCCc---eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCcee---eeeeee-c--CceeEEECCC
Q 021669 79 SLRLLSLHDNK---YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLLRV-Q--GRPAAAYDDQ 149 (309)
Q Consensus 79 ~i~~~d~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~---~~~~~~-~--~~~~~~~~~~ 149 (309)
+|++||+.+++ ....+.+|...|.+++|+|++++|++++.|++|++||+++++. ...+.. + ......+.++
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 99999999877 6778889999999999999999999999999999999988763 333332 1 2334667777
Q ss_pred CcEEE-EEECCEEEEEECCCCCcC--------------CceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCC
Q 021669 150 GLVFA-VAFGGYIRMFDARKYEKG--------------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 214 (309)
Q Consensus 150 ~~~~~-~~~~~~i~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~ 214 (309)
+.+++ ++.|+.|++||++..... ...+..+ ++...+.+++|+|+|++|++++.||.|++||+.+
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 76555 456899999998532100 0112223 6677899999999999999999999999999988
Q ss_pred CeE----eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCc-e--------------------------E
Q 021669 215 GTL----LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK-E--------------------------V 263 (309)
Q Consensus 215 ~~~----~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~-~--------------------------~ 263 (309)
++. +..+. .+...+..++|+|+|++|++|+.|+.+ +|+..... . .
T Consensus 237 ~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (377)
T 3dwl_C 237 PEQPPRALITVK---LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE 312 (377)
T ss_dssp TTSCEEECCCEE---CSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred CCCcceeeEeec---CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence 876 44443 355678899999999999999877755 67664211 0 0
Q ss_pred ---------EEe----------------ecCCCCCcEEEECCCe----eEEEEccceEEEeeecC
Q 021669 264 ---------ASW----------------MSFDTEPPVIKWTPGS----LMFVTGSSELSFWIPDL 299 (309)
Q Consensus 264 ---------~~~----------------~~~~~~v~~l~~~p~~----~~l~s~~~d~~~~~~~~ 299 (309)
..+ ..|...|+++++.+.. ..|+|++.|..+.+|++
T Consensus 313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 313 GPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 001 1288899999977654 26999999977666653
No 50
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-38 Score=280.46 Aligned_cols=277 Identities=13% Similarity=0.173 Sum_probs=231.9
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 89 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~ 89 (309)
|.+.|.+++|+|++++|++|+.|++|++|| .+++++..+..|...+..++|+|++..+++++. |+.+++||+.+++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV---ENVTILWNVISGT 182 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEET---TCCEEEEETTTTE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEec---CCeEEEEECCCCc
Confidence 788999999999999999999999999999 678889999999999999999999999988764 7899999999999
Q ss_pred eEEEeeecccC---------------EEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcE
Q 021669 90 YLRYFKGHHDR---------------VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLV 152 (309)
Q Consensus 90 ~~~~~~~h~~~---------------v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~ 152 (309)
.+..+..|... +.++.|++++ .+++++.|+.|++||+++++....+.... .....+.+++.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE
Confidence 99999888877 9999999875 68899999999999999877665554322 234566666655
Q ss_pred EEE-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCcc
Q 021669 153 FAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST 231 (309)
Q Consensus 153 ~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~ 231 (309)
+++ +.++.|++||++..+. ...+..+...+.+++++|++ .+++++.|+.|++||+.+++.+..+.. +...+
T Consensus 262 l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~i 333 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNS----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV---DGVPI 333 (425)
T ss_dssp EEEEETTSCEEEECSSSBSC----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC---TTCCE
T ss_pred EEEEcCCCEEEEEECCCCcc----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc---CCccE
Confidence 554 5589999999876432 23445566789999999999 999999999999999999998877663 45678
Q ss_pred ceEEECCCCCEEEEEcCCCcEEEEECCCCc--------------------eEEEeecCCC--CCcEEEECCCeeEEEEcc
Q 021669 232 LEASFSPEGMFVISGSGDGSVYAWSVRSGK--------------------EVASWMSFDT--EPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 232 ~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~--------------------~~~~~~~~~~--~v~~l~~~p~~~~l~s~~ 289 (309)
..++|+|++++|++++.||.|++||+.+++ .+..+..|.. .|.+++|+|++++|++++
T Consensus 334 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 334 FAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 899999999999999999999999999888 7888999976 999999999999999999
Q ss_pred ceEEEeeecC
Q 021669 290 SELSFWIPDL 299 (309)
Q Consensus 290 ~d~~~~~~~~ 299 (309)
.|..+.+|++
T Consensus 414 ~dg~i~iw~~ 423 (425)
T 1r5m_A 414 SLQEGSVVAI 423 (425)
T ss_dssp SSSCCEEEEC
T ss_pred cCceEEEEee
Confidence 8854444443
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-37 Score=278.14 Aligned_cols=276 Identities=16% Similarity=0.203 Sum_probs=222.0
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee--ccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 90 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~ 90 (309)
..+.|+||++ ++||+| .|++|+|||+.+|++++.+. .|...|.+++|+|+++.+++++. |++|++||+++++.
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKR 181 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcE
Confidence 3567999985 577766 59999999999999988765 55667999999999999998875 88999999999999
Q ss_pred EEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCcee-eeeeeec--CceeEEECCCCcEEE-EEECCEEEEEEC
Q 021669 91 LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLLRVQ--GRPAAAYDDQGLVFA-VAFGGYIRMFDA 166 (309)
Q Consensus 91 ~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~i~~~d~ 166 (309)
+..+.+|...+.++.++ ++.|++|+.|+.+++||.+.... ...+..+ ......+.+.+..++ ++.|+.+++||.
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 99999999999988774 57999999999999999876443 2233222 223445666665555 456899999998
Q ss_pred CCCCcCCceEEEeCCCCCCCeEEEEccCCC-EEEE--EeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEE
Q 021669 167 RKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLL--TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 243 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~--~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l 243 (309)
+..+.....+.....+...+.+++++|++. ++++ ++.|++|++||+.++..+..+.. ...+..+.|+|+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~----~~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----HSQVCSILWSPHYKEL 335 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC----SSCEEEEEEETTTTEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc----ccceeeeeecCCCCeE
Confidence 876544444455566777899999999764 4444 34799999999999998887653 3457789999999999
Q ss_pred EEEc--CCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 244 ISGS--GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 244 ~s~s--~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
++++ .|+.|+|||+.+++++.++.+|.+.|.+++|+|++++|+||+.|..+.+|++
T Consensus 336 v~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred EEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8865 7999999999999999999999999999999999999999999844444443
No 52
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2e-37 Score=273.02 Aligned_cols=246 Identities=23% Similarity=0.342 Sum_probs=205.9
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCC------ceeeeeeccccceeEEEEecCCCEEEEEcCCCC
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA------TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 76 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 76 (309)
....+..|...|.+++|+|+|.+|++|+.|+++++|++... .....+..|...+..++|++++..+++++.
T Consensus 98 ~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~--- 174 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG--- 174 (354)
T ss_dssp EEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET---
T ss_pred cceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC---
Confidence 45567789999999999999999999999999999998643 345667788889999999999999998864
Q ss_pred CceeEEEEccCCceEEEeeecccCEEEEEecC--CCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcE
Q 021669 77 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLV 152 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~ 152 (309)
|++|++||+++++.+..+.+|...|.+++|+| +++.|++|+.||+|++||++++++...+..+. ...+.+.+++.+
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDA 254 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCE
Confidence 89999999999999999999999999999987 46899999999999999999998877664432 345677777665
Q ss_pred EE-EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCcc
Q 021669 153 FA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST 231 (309)
Q Consensus 153 ~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~ 231 (309)
++ ++.|+.|++||++... ....+........+.+++|+|+|+++++++.|++|++||+.+++.+..+. .|...+
T Consensus 255 l~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~---~h~~~v 329 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF---GHENRV 329 (354)
T ss_dssp EEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC---CCSSCE
T ss_pred EEEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE---CCCCcE
Confidence 55 4568999999998642 12222222233467899999999999999999999999999998877654 466789
Q ss_pred ceEEECCCCCEEEEEcCCCcEEEEE
Q 021669 232 LEASFSPEGMFVISGSGDGSVYAWS 256 (309)
Q Consensus 232 ~~~~~sp~g~~l~s~s~Dg~i~vwd 256 (309)
.+++|+|||++|++|+.|++|++|+
T Consensus 330 ~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 330 STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999996
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.5e-37 Score=279.48 Aligned_cols=279 Identities=18% Similarity=0.337 Sum_probs=226.7
Q ss_pred ceEecCCCcce-EEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 4 GMSFRDYNGRI-SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 4 ~~~~~~h~~~V-~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
..+|.+|.+.| .++.+ ++++|+||+.|++|++||+.+++++..+.+|...|..++|++++ .+++++. |++|++
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~---dg~i~v 187 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST---DRTVRV 187 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET---TSCEEE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC---CCCEEE
Confidence 45789999885 66666 56799999999999999999999999999999999999999877 6666654 889999
Q ss_pred EEccCCceEEEeeecccCEEEEEec--CCCCeEEEecCCCcEEEeeCCCceeeee-----------------------ee
Q 021669 83 LSLHDNKYLRYFKGHHDRVVSLSLC--SSKDCFISGSLDRTVLLWDQRAEKCQGL-----------------------LR 137 (309)
Q Consensus 83 ~d~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~-----------------------~~ 137 (309)
||+++++.+..+.+|.+.|.+++|+ +++++|++++.|++|++||+++...... +.
T Consensus 188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 9999999999999999999999998 5778999999999999999987653221 11
Q ss_pred ecCceeEEECCCC-cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe
Q 021669 138 VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 216 (309)
Q Consensus 138 ~~~~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~ 216 (309)
..........+.+ .+++++.|+.|++||++..+ .+..+.++...+.+++++|+++++++++.||.|++||+.+++
T Consensus 268 ~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 268 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK----CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred CccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc----EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 1111122223333 45556678999999997533 245566777889999999999999999999999999999999
Q ss_pred EeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce-EEEe
Q 021669 217 LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSFW 295 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d-~~~~ 295 (309)
.+..+.. |...+..++|+ ++++++++.||+|++||+.+++..... .|...+..++|+|+++++++++.. +++|
T Consensus 344 ~~~~~~~---h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~dg~i~iw 417 (464)
T 3v7d_B 344 LMYTLQG---HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGSENQFNIY 417 (464)
T ss_dssp EEEEECC---CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEETTEEEEE
T ss_pred EEEEEeC---CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEecCCeEEEE
Confidence 8887753 55678888886 589999999999999999988766554 466778899999999999998842 6666
Q ss_pred eec
Q 021669 296 IPD 298 (309)
Q Consensus 296 ~~~ 298 (309)
..+
T Consensus 418 d~~ 420 (464)
T 3v7d_B 418 NLR 420 (464)
T ss_dssp ETT
T ss_pred ECC
Confidence 553
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-38 Score=284.23 Aligned_cols=282 Identities=16% Similarity=0.253 Sum_probs=227.0
Q ss_pred CCcceEEEEeCCCCC-EEEEe----------eCCCcEEEEEcCCCce---eeeeeccccceeEEEEecCCCEEEEEcCCC
Q 021669 10 YNGRISSMDFHKSSS-YLVTA----------SDDESIRLYDVTAATC---LKTINSKKYGVDLVCFTSHPTTVIYSSKNG 75 (309)
Q Consensus 10 h~~~V~~i~~s~~~~-~l~t~----------s~D~~v~iWd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g 75 (309)
+...|.+++|+|+++ +|++| +.|++|+|||+.+++. +..+ .|...+..++|++++..+++++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-- 87 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALD-- 87 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEES--
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEcc--
Confidence 456899999999987 99999 8999999999998763 3334 46778999999999999988764
Q ss_pred CCceeEEEEccC----CceEEEeeecccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCce------eeeee---ee--c
Q 021669 76 WDESLRLLSLHD----NKYLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEK------CQGLL---RV--Q 139 (309)
Q Consensus 76 ~d~~i~~~d~~~----~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~------~~~~~---~~--~ 139 (309)
|+.|++||+.+ .+.+..+.+|.+.|.+++|+|+ +++|++++.|++|++||+++.+ ....+ .. .
T Consensus 88 -dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 88 -NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp -SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred -CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 78999999987 4578889999999999999998 8899999999999999998775 22221 11 1
Q ss_pred CceeEEECCC-CcEEE-EEECCEEEEEECCCCCcCCceEEEeCCC------CCCCeEEEEccCC-CEEEEEeCCC---cE
Q 021669 140 GRPAAAYDDQ-GLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGD------ISDANVVKFSNDG-RLMLLTTMEG---HI 207 (309)
Q Consensus 140 ~~~~~~~~~~-~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~------~~~~~~v~~s~dg-~~l~~~~~dg---~v 207 (309)
....+.+.++ +.+++ ++.++.|++||++..+ ....+..+ ...+.+++|+|++ .++++++.|+ .|
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKK----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTE----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 2234667766 45444 4568999999987643 12233333 5679999999997 6899999998 99
Q ss_pred EEEECCCC-eEeEEeeecCCCCCccceEEECC-CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCe-eE
Q 021669 208 HVLDSFRG-TLLSTYNVKPVSRNSTLEASFSP-EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS-LM 284 (309)
Q Consensus 208 ~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~sp-~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~-~~ 284 (309)
++||++++ ..+..+. ..|...+..++|+| ++++|++++.|+.|++||+.+++.+..+..|...+.+++|+|++ ++
T Consensus 243 ~~~d~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLN--QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CEEETTSTTSCSBCCC--SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred EEEeCCCCCCCcEEee--cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 99999876 4443332 13557788999999 99999999999999999999999999999999999999999999 89
Q ss_pred EEEccceEEEeeecCCC
Q 021669 285 FVTGSSELSFWIPDLSK 301 (309)
Q Consensus 285 l~s~~~d~~~~~~~~~~ 301 (309)
|++++.|..+.+|++..
T Consensus 321 l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQN 337 (416)
T ss_dssp EEECCSSSEEEEEESCC
T ss_pred EEEEecCCcEEEEEccC
Confidence 99999985555555443
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=263.46 Aligned_cols=277 Identities=16% Similarity=0.193 Sum_probs=219.1
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee--ccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 14 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 14 V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
.+.|+||+++ +||+| .|++|+|||+.++++++.+. +|...|.+++|+++++.+++++. |++|++||+++++.+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeE
Confidence 5779999976 66665 59999999999999988775 45667999999999999998865 889999999999999
Q ss_pred EEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceee-eeeeec--CceeEEECCCCc-EEEEEECCEEEEEECC
Q 021669 92 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-GLLRVQ--GRPAAAYDDQGL-VFAVAFGGYIRMFDAR 167 (309)
Q Consensus 92 ~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~-~~~~~~--~~~~~~~~~~~~-~~~~~~~~~i~~~d~~ 167 (309)
..+.+|...+.++.+ +++.+++++.|+.+++|+....... ..+..+ ......+.+.+. +++++.|+.|++||++
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 999999999887655 5679999999999999998765432 222221 123345556555 4555568999999998
Q ss_pred CCCcCCceEEEeCCCCCCCeEEEEccCCCEE---EEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEE
Q 021669 168 KYEKGPFDIFSVGGDISDANVVKFSNDGRLM---LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 244 (309)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l---~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~ 244 (309)
..+...........+...+..++++|++..+ ++++.+++|++||........... +...+..+.|+|+++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELI 256 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEEETTTTEEE
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc----ceeeeeeeeecccccceE
Confidence 7554333344455566678899999987543 356678999999998877765543 345677889999999887
Q ss_pred EEc--CCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecCCC
Q 021669 245 SGS--GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 301 (309)
Q Consensus 245 s~s--~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~~~ 301 (309)
+++ .|+.|++||+.+++++.++.+|.+.|++++|+|++++|+||+.|..+.+|++..
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 764 799999999999999999999999999999999999999999996665555543
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.2e-38 Score=283.06 Aligned_cols=277 Identities=17% Similarity=0.207 Sum_probs=220.5
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEE
Q 021669 14 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY 93 (309)
Q Consensus 14 V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~ 93 (309)
+++++|+|++++|++++.|+++++||+.+++....+..+ ..+...+++++++.+++++. |+.|++||+++++.+..
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~ 134 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTT---EGDIKVLDSNFNLQREI 134 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEET---TSCEEEECTTSCEEEEE
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEEC---CCCEEEEeCCCcceeee
Confidence 447899999999999999999999999998888877776 33555678899999888764 78999999999999888
Q ss_pred eeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCc-EEEEEECCEEEEEECCCCC
Q 021669 94 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGL-VFAVAFGGYIRMFDARKYE 170 (309)
Q Consensus 94 ~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~ 170 (309)
+.+|.+.|.+++|+|++++|++++.|++|++||++++++...+..+. ...+.+.+++. +++++.|+.|++||++..+
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 89999999999999999999999999999999999887766664332 23456666665 5555568999999987542
Q ss_pred cCCceEEEeCC---C---------------------CCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC
Q 021669 171 KGPFDIFSVGG---D---------------------ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 226 (309)
Q Consensus 171 ~~~~~~~~~~~---~---------------------~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~ 226 (309)
. ...+.. + ...+.+++|+|+|+++++++.||.|++||+.++..+..+.. .
T Consensus 215 ~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~ 288 (420)
T 3vl1_A 215 T----IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS--K 288 (420)
T ss_dssp E----EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC--T
T ss_pred e----eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc--c
Confidence 1 111111 1 23455566789999999999999999999999887766532 3
Q ss_pred CCCccceEEECCCCC-EEEEEcCCCcEEEEECCCCce-EEEeec-CCCCCcEEEECCCeeEEEEccceEEEeeecCCC
Q 021669 227 SRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRSGKE-VASWMS-FDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 301 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~-~l~s~s~Dg~i~vwd~~~~~~-~~~~~~-~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~~~ 301 (309)
+...+.+++|+|+++ +|++|+.||.|++||+++++. +..+.. |...+.++. .|++++|++++.|..+.+|++..
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEEECC
T ss_pred cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEeccC
Confidence 556788999999999 999999999999999998754 677766 556666675 56788999999885555554433
No 57
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.9e-38 Score=271.81 Aligned_cols=261 Identities=10% Similarity=0.174 Sum_probs=212.3
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCC----ceeeeeeccccceeEEEEec--CCCEEEEEcCCCCC
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWD 77 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~~~~~s~~g~d 77 (309)
-..+.+|++.|++++|+|++++||+|+.|++|+|||+.++ +.+..+.+|...|..++|++ ++..+++++. |
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~---d 80 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY---D 80 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---T
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---C
Confidence 3567899999999999999999999999999999999876 45677888999999999999 5888888764 8
Q ss_pred ceeEEEEccCC---------ceEEEeeecccCEEEEEecCC--CCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEE
Q 021669 78 ESLRLLSLHDN---------KYLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAY 146 (309)
Q Consensus 78 ~~i~~~d~~~~---------~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~ 146 (309)
++|++||+.++ +.+..+.+|.+.|.+++|+|+ +++|++++.||.|++||+++++....+.....
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~----- 155 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE----- 155 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE-----
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc-----
Confidence 89999999887 557888999999999999999 99999999999999999988765433321110
Q ss_pred CCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC---CCEEEEEeCCCcEEEEECCCCeEeEEeee
Q 021669 147 DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDSFRGTLLSTYNV 223 (309)
Q Consensus 147 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d---g~~l~~~~~dg~v~i~d~~~~~~~~~~~~ 223 (309)
+... . .....+...+.+++++|+ +.++++++.++.+.+|+...+........
T Consensus 156 --------------~~~~---~--------~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (351)
T 3f3f_A 156 --------------MKVL---S--------IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKL 210 (351)
T ss_dssp --------------EESC---S--------CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEEC
T ss_pred --------------cccc---c--------cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeec
Confidence 0000 0 011124457889999997 99999999999998888777665322222
Q ss_pred cCCCCCccceEEECCCC----CEEEEEcCCCcEEEEECCCC---------------------------------------
Q 021669 224 KPVSRNSTLEASFSPEG----MFVISGSGDGSVYAWSVRSG--------------------------------------- 260 (309)
Q Consensus 224 ~~~~~~~~~~~~~sp~g----~~l~s~s~Dg~i~vwd~~~~--------------------------------------- 260 (309)
..|...+.+++|+|++ ++|++|+.||.|++||+.++
T Consensus 211 -~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 211 -PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp -CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred -CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 2466788999999998 89999999999999999875
Q ss_pred -------ceEEEeecCCCCCcEEEECCCeeEEEEccce--EEEeeec
Q 021669 261 -------KEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 298 (309)
Q Consensus 261 -------~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~ 298 (309)
+.+..+.+|...|++++|+|++++|++++.| +++|..+
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 5667778899999999999999999999998 5556554
No 58
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.9e-37 Score=308.52 Aligned_cols=288 Identities=18% Similarity=0.256 Sum_probs=236.4
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCC--EEEEEcCCCCCce
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT--TVIYSSKNGWDES 79 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~s~~g~d~~ 79 (309)
+...++.+|.+.|.+++|+|++++|++|+.|++|+|||+.+++++..+.+|...+.+++|+++++ .+++++ .|+.
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~---~d~~ 724 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS---NDFF 724 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE---TTSC
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEe---CCCe
Confidence 45678899999999999999999999999999999999999999999999999999999999644 455554 3889
Q ss_pred eEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC---------------ceeE
Q 021669 80 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG---------------RPAA 144 (309)
Q Consensus 80 i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~---------------~~~~ 144 (309)
|++||+.+++.+..+.+|.+.|++++|+|+++.|++++.||+|++||+++++....+.... ....
T Consensus 725 v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp EEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred EEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 9999999999999999999999999999999999999999999999998887655543211 1234
Q ss_pred EECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeec
Q 021669 145 AYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 224 (309)
Q Consensus 145 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 224 (309)
.+.+++..++++.++.+.+||+..... ......++...+.+++|+|+++++++++.||.|++||..++..+..+.
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-- 879 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGL---LAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR-- 879 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCE---EEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC--
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCc---eeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC--
Confidence 567888888888899999999876431 222334667789999999999999999999999999999988776654
Q ss_pred CCCCCccceEEECCCCCEEEEEcCCCcEEEEEC-----------------------------------------------
Q 021669 225 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV----------------------------------------------- 257 (309)
Q Consensus 225 ~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~----------------------------------------------- 257 (309)
.|...+..++|+|+|+++++++.|+.|++||+
T Consensus 880 -~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1249)
T 3sfz_A 880 -GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDY 958 (1249)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEE
T ss_pred -CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEE
Confidence 34556677777777777777777777777764
Q ss_pred --------------------------------CCCceEEEeecCCCCCcEEEECCCeeEEEEccce--EEEeeec
Q 021669 258 --------------------------------RSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 298 (309)
Q Consensus 258 --------------------------------~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~ 298 (309)
.+++.+..+.+|...|.+++|+|+++.+++++.| +++|...
T Consensus 959 ~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp ECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred cccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 3444555666788899999999999999999987 5555443
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=268.36 Aligned_cols=256 Identities=15% Similarity=0.211 Sum_probs=199.1
Q ss_pred cCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCC--ceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEc
Q 021669 8 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 85 (309)
Q Consensus 8 ~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~ 85 (309)
.+|.+.|.+++|+|++++|++|+.|++++|||+.++ +++.++.+|...|..++|+|+++.+++++. |++|++||+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd~ 134 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR---DKSVWVWEV 134 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC---CCeEEEEEC
Confidence 689999999999999999999999999999999866 567889999999999999999999998865 889999999
Q ss_pred cCCc---eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeee--eeeec--CceeEEECCCCcEEEE-EE
Q 021669 86 HDNK---YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG--LLRVQ--GRPAAAYDDQGLVFAV-AF 157 (309)
Q Consensus 86 ~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~-~~ 157 (309)
.+++ .+..+.+|...|.+++|+|++++|++++.|++|++||.++++... .+..+ ....+.+++++.++++ +.
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp CTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 8763 466788999999999999999999999999999999987765332 22222 2335677887765555 56
Q ss_pred CCEEEEEECCCCCcCC-----------ceEEEeCC-CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeE----eE--
Q 021669 158 GGYIRMFDARKYEKGP-----------FDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL----LS-- 219 (309)
Q Consensus 158 ~~~i~~~d~~~~~~~~-----------~~~~~~~~-~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~----~~-- 219 (309)
|+.|++||........ ..+..+.+ +...+..++|+|++..+++++.|+.|++|+...+.. ..
T Consensus 215 D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~ 294 (345)
T 3fm0_A 215 DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSL 294 (345)
T ss_dssp TSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEE
T ss_pred CCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEE
Confidence 8999999964321110 01122333 566889999999999999999999999999765421 11
Q ss_pred EeeecCCCCCccceEEECCCC-CEEEEEcCCCcEEEEECCCCceEEEe
Q 021669 220 TYNVKPVSRNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASW 266 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~sp~g-~~l~s~s~Dg~i~vwd~~~~~~~~~~ 266 (309)
.......|...|.+++|+|++ .+|||||.||+|++|++.++++....
T Consensus 295 ~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 295 TAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 112223567789999999998 59999999999999999988765443
No 60
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-37 Score=268.32 Aligned_cols=252 Identities=15% Similarity=0.207 Sum_probs=186.7
Q ss_pred ceEe-cC-CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCC-------CceeeeeeccccceeEEEEecCCCEEEEEcCC
Q 021669 4 GMSF-RD-YNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-------ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN 74 (309)
Q Consensus 4 ~~~~-~~-h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 74 (309)
...+ .+ |.+.|.+++|+|++++|++|+.|++|+|||+.. .+++..+.+|...|..++|+|+++++++++.
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~- 127 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR- 127 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET-
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC-
Confidence 3445 44 999999999999999999999999999999853 4567788899999999999999999998865
Q ss_pred CCCceeEEEEccC-C---ceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCc--eeeeeeeecC--ceeEEE
Q 021669 75 GWDESLRLLSLHD-N---KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE--KCQGLLRVQG--RPAAAY 146 (309)
Q Consensus 75 g~d~~i~~~d~~~-~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~--~~~~~~~~~~--~~~~~~ 146 (309)
|++|++||+.. + +.+..+.+|...|.+++|+|++++|+|++.|++|++||.+++ ++...+..+. .....+
T Consensus 128 --D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~ 205 (330)
T 2hes_X 128 --DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDF 205 (330)
T ss_dssp --TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred --CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEe
Confidence 88999999943 2 467788999999999999999999999999999999998765 3444443222 234556
Q ss_pred CCC--Cc-EEEEEECCEEEEEECCCCCcCC----ceEEEeCC-CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEe
Q 021669 147 DDQ--GL-VFAVAFGGYIRMFDARKYEKGP----FDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 218 (309)
Q Consensus 147 ~~~--~~-~~~~~~~~~i~~~d~~~~~~~~----~~~~~~~~-~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~ 218 (309)
.++ +. +++++.|+.|++||++...... .....+.+ +...+.+++|++++ ++++++.||.|++||..+++..
T Consensus 206 ~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~ 284 (330)
T 2hes_X 206 DKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK 284 (330)
T ss_dssp CCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEE
T ss_pred cCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceE
Confidence 665 44 5556678999999986432111 11222322 66789999999766 7899999999999998877432
Q ss_pred EEeeecCCCCC-ccceEEECC--CCCEEEEEcCCCcEEEEECCC
Q 021669 219 STYNVKPVSRN-STLEASFSP--EGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~~sp--~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
........|.. .+..++|+| ++++|+|||.||+|++||+.+
T Consensus 285 ~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 285 VFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 11111123444 688899999 789999999999999999865
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.9e-36 Score=274.30 Aligned_cols=280 Identities=19% Similarity=0.310 Sum_probs=232.8
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
+..+++.+|.+.|.++.|+ ++++++|+.|++|++||+.+++++..+.+|...+.++++. ++.+++++. |++|+
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~---dg~i~ 222 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSR---DATLR 222 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEET---TSEEE
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeC---CCEEE
Confidence 4567889999999999998 5799999999999999999999999999999989888885 567777764 88999
Q ss_pred EEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCce--eEEECCCCcEEEEEECC
Q 021669 82 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFGG 159 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 159 (309)
+||+.+++.+..+.+|...|.++.+ +++.+++++.||.|++||++++++...+..+... ...+ +...+++++.|+
T Consensus 223 ~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~ 299 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDT 299 (445)
T ss_dssp EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTS
T ss_pred EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCC
Confidence 9999999999999999999999998 6789999999999999999988877666533322 2333 444566666799
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCC
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 239 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 239 (309)
.|++||+++.+ .+..+.++...+.++. ++++++++++.||.|++||+.+++.+..+.....+...+.+++|+
T Consensus 300 ~i~i~d~~~~~----~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-- 371 (445)
T 2ovr_B 300 SIRVWDVETGN----CIHTLTGHQSLTSGME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-- 371 (445)
T ss_dssp CEEEEETTTCC----EEEEECCCCSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--
T ss_pred eEEEEECCCCC----EEEEEcCCcccEEEEE--EeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--
Confidence 99999997643 2345556655555554 567899999999999999999999888877544466778888885
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEe-----ecCCCCCcEEEECCCeeEEEEccceE----EEeeecC
Q 021669 240 GMFVISGSGDGSVYAWSVRSGKEVASW-----MSFDTEPPVIKWTPGSLMFVTGSSEL----SFWIPDL 299 (309)
Q Consensus 240 g~~l~s~s~Dg~i~vwd~~~~~~~~~~-----~~~~~~v~~l~~~p~~~~l~s~~~d~----~~~~~~~ 299 (309)
++++++|+.||.|++||+.+++.+..+ ..|.+.|.+++|+|++..+++|+.|. ++.+++.
T Consensus 372 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 372 KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 689999999999999999999998887 47888999999999999999999874 3665554
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-37 Score=273.99 Aligned_cols=256 Identities=13% Similarity=0.109 Sum_probs=206.2
Q ss_pred CccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcC--CCceeeeeeccccceeEEEEecC--CCEEEEEcCCCC
Q 021669 1 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGW 76 (309)
Q Consensus 1 ~~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g~ 76 (309)
+++.+.+.+|++.|.+++|+|++++||+|+.|++|+|||+. +++++..+.+|...|..++|+++ +..+++++.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--- 77 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY--- 77 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc---
Confidence 36778899999999999999999999999999999999998 66778889999999999999877 788888764
Q ss_pred CceeEEEEccCCc--eEEEeeecccCEEEEEecCC--CCeEEEecCCCcEEEeeCCCceeeeeeee--c--CceeEEECC
Q 021669 77 DESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRV--Q--GRPAAAYDD 148 (309)
Q Consensus 77 d~~i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~--~--~~~~~~~~~ 148 (309)
|+.|++||+.+++ .+..+.+|...|.+++|+|+ ++.|++++.|+.|++||+++......... . ......+.+
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 8899999999987 77888899999999999999 89999999999999999987744332222 1 123455665
Q ss_pred -------------CC-cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC---CCEEEEEeCCCcEEEEE
Q 021669 149 -------------QG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLD 211 (309)
Q Consensus 149 -------------~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d---g~~l~~~~~dg~v~i~d 211 (309)
++ .+++++.|+.|++||++...........+.++...+.+++|+|+ ++++++++.||.|++||
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 34 45555668999999997654322234466677889999999999 89999999999999999
Q ss_pred CCCCeEe--EEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 212 SFRGTLL--STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 212 ~~~~~~~--~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
+.++... ........+...+.+++|+|+|++|++++.||.|++|++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 9876421 11111222556788999999999999999999999999974
No 63
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-36 Score=271.85 Aligned_cols=241 Identities=17% Similarity=0.258 Sum_probs=199.8
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEE
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~ 92 (309)
.|.+++|+|+|++|++|+.|++|+|||+.+++++..+.+|...|..++|+|+++.+++++. |++|++||+.+++...
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCSL 201 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeEE
Confidence 4999999999999999999999999999999999999999999999999999999988764 8999999999998877
Q ss_pred EeeecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCCceeeeeeee-------c--CceeEEECCCCcEEEE-EECCEE
Q 021669 93 YFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRV-------Q--GRPAAAYDDQGLVFAV-AFGGYI 161 (309)
Q Consensus 93 ~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~-~~~~~i 161 (309)
.+. |...+.+++|+| ++++|++++.|++|++||++++++...+.. + ....+.+.+++.++++ +.|+.|
T Consensus 202 ~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 202 TLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 765 667899999999 899999999999999999998876655421 1 1234667777765554 568999
Q ss_pred EEEECCCCCcC--------CceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 162 RMFDARKYEKG--------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 162 ~~~d~~~~~~~--------~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
++||++..... ......+.++...+.+++++|+++++++++.|+.|++||..+++.+..+. .|...+.+
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~---~h~~~v~~ 357 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVIS 357 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC---CCCCCEEE
Confidence 99998753211 11233455677789999999999999999999999999999999887765 35677888
Q ss_pred EEECC------CCCEEEEEcCCCcEEEEECCCC
Q 021669 234 ASFSP------EGMFVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 234 ~~~sp------~g~~l~s~s~Dg~i~vwd~~~~ 260 (309)
++|+| ++++|+|||.||+|+||++.+.
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 99876 7899999999999999998643
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=271.25 Aligned_cols=292 Identities=15% Similarity=0.197 Sum_probs=227.7
Q ss_pred cceEecCCCcceEEEEeCC-CCCEEEEeeCCCcEEEEEcCCCceeeeee-------------ccccceeEEEEec-CCCE
Q 021669 3 VGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTIN-------------SKKYGVDLVCFTS-HPTT 67 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~ 67 (309)
....+++|.+.|++++|+| ++++|++|+.|++|++||+.+++....+. +|...|..++|+| ++..
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 4567789999999999999 99999999999999999999887766654 4788899999999 6667
Q ss_pred EEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCC---CCeEEEecCCCcEEEeeCCCceeeeeeeecC--ce
Q 021669 68 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RP 142 (309)
Q Consensus 68 ~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~ 142 (309)
+++++. |+.|++||+.+++.+..+. +...+.++.+++. +.++++++.|+.|++||++++++...+.... ..
T Consensus 115 l~s~~~---d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 115 FTSSSF---DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp EEEEET---TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred EEEEeC---CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 777654 8899999999998887776 8889999999984 4499999999999999999887766654332 23
Q ss_pred eEEECCCCc--EEEEEECCEEEEEECCCCCcCCceE------------EEeCCCCCCCeEEEEccCCCEEEEEeCCCcEE
Q 021669 143 AAAYDDQGL--VFAVAFGGYIRMFDARKYEKGPFDI------------FSVGGDISDANVVKFSNDGRLMLLTTMEGHIH 208 (309)
Q Consensus 143 ~~~~~~~~~--~~~~~~~~~i~~~d~~~~~~~~~~~------------~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~ 208 (309)
...+.+++. +++++.|+.|++||++......... .....+...+.+++|+|+++++++++.||.|+
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 270 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMR 270 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEE
Confidence 456777664 4456678999999997654211110 01134556789999999999999999999999
Q ss_pred EEECCCCeEeEEeeecC--CCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEE
Q 021669 209 VLDSFRGTLLSTYNVKP--VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFV 286 (309)
Q Consensus 209 i~d~~~~~~~~~~~~~~--~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~ 286 (309)
+||+.+++....+.... ..............+..+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|+
T Consensus 271 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELY 350 (408)
T ss_dssp EEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEE
Confidence 99998877654332111 1111111122234466777888899999999999999999999999999999999999999
Q ss_pred Eccce--EEEeeec
Q 021669 287 TGSSE--LSFWIPD 298 (309)
Q Consensus 287 s~~~d--~~~~~~~ 298 (309)
+++.| +++|.++
T Consensus 351 s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 351 SGSRDCNILAWVPS 364 (408)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EECCCCeEEEEeCC
Confidence 99988 5556553
No 65
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-38 Score=290.40 Aligned_cols=283 Identities=13% Similarity=0.118 Sum_probs=204.7
Q ss_pred eEecCCCcceEEEEeCCC------CCEEEEeeCCCcEEEEEcCCCcee-----------eeeeccccceeEEEEecCCCE
Q 021669 5 MSFRDYNGRISSMDFHKS------SSYLVTASDDESIRLYDVTAATCL-----------KTINSKKYGVDLVCFTSHPTT 67 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~------~~~l~t~s~D~~v~iWd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~ 67 (309)
.++.+|.+.|.+++|+|+ +.+||||+.|++|||||+.++++. .++.+|...|.+++|+++ ..
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce
Confidence 456788999999999997 579999999999999999876432 367788888999999875 46
Q ss_pred EEEEcCCCCCceeEEEEccCCc-eEEEeeecccCEEEE--EecCCC-CeEEEecCCCcEEEeeCCCceeeeeeeec----
Q 021669 68 VIYSSKNGWDESLRLLSLHDNK-YLRYFKGHHDRVVSL--SLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQ---- 139 (309)
Q Consensus 68 ~~~~s~~g~d~~i~~~d~~~~~-~~~~~~~h~~~v~~v--~~~~~~-~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~---- 139 (309)
+++++. |++|++||+++++ ....+.+|.+.|++| .|+|++ ++|+|+|.|++|++||++++++...+...
T Consensus 280 lasgs~---DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 280 VVCGFK---NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp EEEEET---TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred EEEEeC---CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 777654 8999999998764 456789999999999 567887 89999999999999999887765444321
Q ss_pred CceeEEECCCCcEEE-EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEe
Q 021669 140 GRPAAAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 218 (309)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~ 218 (309)
....+.++|++..++ ++.|+.|++||++.... ...+.+|...|.+++|||+|++|++++.||+|++||+..+ .+
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~----~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~ 431 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LL 431 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTC----CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TT
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECccccc----ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hc
Confidence 123467777665554 45678999999986432 2344567789999999999999999999999999998653 22
Q ss_pred EEeeec--CCCCCccceEEECCCCCEEEEEcCCCcEEEEECC-CCceEEEeecCCCCCcEEEECCCee---EEEEccce-
Q 021669 219 STYNVK--PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKEVASWMSFDTEPPVIKWTPGSL---MFVTGSSE- 291 (309)
Q Consensus 219 ~~~~~~--~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~-~~~~~~~~~~~~~~v~~l~~~p~~~---~l~s~~~d- 291 (309)
..+... ......++.++|+|+|+.+. ... ..++|+.. ++..+.++.+|...|.+|+|+|+++ .+++|+.+
T Consensus 432 ~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g 508 (524)
T 2j04_B 432 HGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAG 508 (524)
T ss_dssp TCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTS
T ss_pred cccccCccceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCc
Confidence 111100 01112456889999998653 322 34455443 4667888899999999999999964 89999987
Q ss_pred -EEEeeecC
Q 021669 292 -LSFWIPDL 299 (309)
Q Consensus 292 -~~~~~~~~ 299 (309)
+++|.+++
T Consensus 509 ~vrlw~l~~ 517 (524)
T 2j04_B 509 LLTLEYLSL 517 (524)
T ss_dssp EEEEEECSC
T ss_pred eEEEEEccc
Confidence 66666554
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-36 Score=306.04 Aligned_cols=286 Identities=15% Similarity=0.265 Sum_probs=242.2
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEE
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 84 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d 84 (309)
..+.+|.+.|++++|+|++++|++|+.|++|+|||+.+++++.++.+|...|.+++|+|+++.+++++. |++|++||
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~v~vwd 685 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA---DKKVKIWD 685 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC---CCeEEEEE
Confidence 467899999999999999999999999999999999999999999999999999999999999998864 88999999
Q ss_pred ccCCceEEEeeecccCEEEEEecC--CCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEE-EEECC
Q 021669 85 LHDNKYLRYFKGHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA-VAFGG 159 (309)
Q Consensus 85 ~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~ 159 (309)
+.+++.+..+.+|...|.+++|+| ++..+++++.|++|++||++++++...+..+. .....+.+++.+++ ++.|+
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 999999999999999999999999 45589999999999999999988776654332 33456777775554 55689
Q ss_pred EEEEEECCCCCcCCceEEEe-----------CCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCC
Q 021669 160 YIRMFDARKYEKGPFDIFSV-----------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 228 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~ 228 (309)
.|++||++..... ..... ......+.+++|+|+|+.+++++ ++.+.+||..++..+..+.. .+.
T Consensus 766 ~v~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~--~~~ 840 (1249)
T 3sfz_A 766 TLRLWDVRSANER--KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHT--GHH 840 (1249)
T ss_dssp EEEEEEGGGTEEE--EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEEC--SSS
T ss_pred eEEEEeCCCCccc--ceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcC--CCC
Confidence 9999998754210 01110 11123577889999999999887 78999999999888776543 456
Q ss_pred CccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeec
Q 021669 229 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~ 298 (309)
..+..++|+|+++++++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|..+..|+
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 7788999999999999999999999999999999999999999999999999999999999984444444
No 67
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.2e-37 Score=272.32 Aligned_cols=256 Identities=19% Similarity=0.312 Sum_probs=204.2
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc-------eeeeeeccccceeEEEEecCCC-EEEEEcC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-------CLKTINSKKYGVDLVCFTSHPT-TVIYSSK 73 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~-~~~~~s~ 73 (309)
+....+.+|...|.+++|+|++++|++|+.|++++|||+.+.. ..+.+.+|...+..++|.|+.. .+++++.
T Consensus 99 ~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~ 178 (380)
T 3iz6_a 99 QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG 178 (380)
T ss_dssp EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT
T ss_pred ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC
Confidence 3457788999999999999999999999999999999987532 3466788988899999998755 5666653
Q ss_pred CCCCceeEEEEccCCceEEEe-----eecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCC-ceeeeeeeec--CceeE
Q 021669 74 NGWDESLRLLSLHDNKYLRYF-----KGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQ--GRPAA 144 (309)
Q Consensus 74 ~g~d~~i~~~d~~~~~~~~~~-----~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~-~~~~~~~~~~--~~~~~ 144 (309)
|++|++||+.+++.+..+ .+|...|.++.|++ ++++|++|+.|++|++||++. .++...+..+ ....+
T Consensus 179 ---D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v 255 (380)
T 3iz6_a 179 ---DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSV 255 (380)
T ss_dssp ---TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEE
T ss_pred ---CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEE
Confidence 899999999999988877 68999999999987 788999999999999999974 3444444322 23456
Q ss_pred EECCCCcEEEE-EECCEEEEEECCCCCcCCceEEEeC-----CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEe
Q 021669 145 AYDDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 218 (309)
Q Consensus 145 ~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~ 218 (309)
.+.+++.++++ +.|+.|++||++.... ...+... .+...+.+++|+|+|+++++++.||.|++||..+++.+
T Consensus 256 ~~~p~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDGTCRLFDMRTGHQ--LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp EECTTSSEEEEECSSSCEEEEETTTTEE--EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred EEecCCCeEEEEcCCCeEEEEECCCCcE--EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 77887765554 5689999999986431 1111111 11234789999999999999999999999999988877
Q ss_pred EEeee-cCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 021669 219 STYNV-KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 262 (309)
Q Consensus 219 ~~~~~-~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~ 262 (309)
..+.. ...|...|.+++|+|||++|+|||.|++|++|++...+.
T Consensus 334 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 334 LNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp EEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred EEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 66532 234677899999999999999999999999999976543
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.4e-36 Score=269.24 Aligned_cols=277 Identities=17% Similarity=0.225 Sum_probs=221.8
Q ss_pred cCCCcce--EEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec-cccceeEEEEecCCCEEEEEcCCCCCceeEEEE
Q 021669 8 RDYNGRI--SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 84 (309)
Q Consensus 8 ~~h~~~V--~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d 84 (309)
.+|...+ .+++|++ ..+++++.|++|++||+.++++...+.. |...|..++|+|++..+++++. |+.|++||
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---dg~i~iwd 162 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG---NGLVDIYD 162 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC---CCeEEEEE
Confidence 3666654 4455554 6688999999999999999998888776 6778999999999999988864 78999999
Q ss_pred ccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCC-ceeeeeeeecC--ceeEEECCCCcEEEE-EECCE
Q 021669 85 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQG--RPAAAYDDQGLVFAV-AFGGY 160 (309)
Q Consensus 85 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ 160 (309)
+++++.+..+.+|...|.+++| +++.|++++.||.|++||++. ......+..+. .....+.+++.++++ +.|+.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 9999999999999999999999 457999999999999999984 44444433222 334567777765555 45899
Q ss_pred EEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCC-EEEEEe--CCCcEEEEECCCCeEeEEeeecCCCCCccceEEEC
Q 021669 161 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 237 (309)
Q Consensus 161 i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~--~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~s 237 (309)
|++||++... ....+..+...+.+++++|++. ++++++ .|+.|++||+.+++.+..+. +...+..++|+
T Consensus 241 v~iwd~~~~~----~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~s 312 (401)
T 4aez_A 241 VQIWDARSSI----PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD----AGSQVTSLIWS 312 (401)
T ss_dssp EEEEETTCSS----EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEEC
T ss_pred EEEccCCCCC----ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe----CCCcEEEEEEC
Confidence 9999998632 3445566778899999999774 555554 69999999999999888775 33568899999
Q ss_pred CCCCEEEE--EcCCCcEEEEECCCCceE--EEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 238 PEGMFVIS--GSGDGSVYAWSVRSGKEV--ASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 238 p~g~~l~s--~s~Dg~i~vwd~~~~~~~--~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
|+++++++ |+.||.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.|..+.+|++
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred CCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 99999999 558999999999986554 446789999999999999999999998844444433
No 69
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.4e-36 Score=264.78 Aligned_cols=247 Identities=13% Similarity=0.208 Sum_probs=195.1
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
...+.+|...|.+++|+|++.+++||+.|++|+|||+.++++++.+.+|...|..++|+|+++.+++++. |++|++|
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~~w 145 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA---EREIKLW 145 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET---TSCEEEE
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC---CCEEEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999999988764 8899999
Q ss_pred EccCCceEEEee---ecccCEEEEEecCCC----------CeEEEecCCCcEEEeeCCCceeeeeeeec--CceeEEECC
Q 021669 84 SLHDNKYLRYFK---GHHDRVVSLSLCSSK----------DCFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDD 148 (309)
Q Consensus 84 d~~~~~~~~~~~---~h~~~v~~v~~~~~~----------~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~--~~~~~~~~~ 148 (309)
|+... ....+. +|...|.++.|+|++ .+|++++.|++|++||.. .+....+..+ ....+.+++
T Consensus 146 d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 146 NILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISP 223 (343)
T ss_dssp ESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECT
T ss_pred eccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECC
Confidence 99743 333333 799999999999986 689999999999999953 4443333322 234567788
Q ss_pred CCcEEEE-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeE--Eeeec-
Q 021669 149 QGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS--TYNVK- 224 (309)
Q Consensus 149 ~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~--~~~~~- 224 (309)
++.++++ +.|+.|++||++..... ...+. +...+.+++|+|+++++++ +.|+.|++||+.+++... .+...
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~~~~~-~~~~~---~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~ 298 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILNLTYP-QREFD---AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEP 298 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSCCSSC-SEEEE---CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEECCCCS
T ss_pred CCCEEEEEcCCCeEEEEECCCCccc-ceeec---CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEEeecCc
Confidence 8766655 46899999998643322 12222 1245899999999998765 468889999998765443 22211
Q ss_pred -------CCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCC
Q 021669 225 -------PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 225 -------~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~ 260 (309)
..+...+.+++|+|+|++|++|+.||+|++|++.++
T Consensus 299 ~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 299 ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 134556889999999999999999999999998764
No 70
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.5e-36 Score=258.16 Aligned_cols=247 Identities=17% Similarity=0.310 Sum_probs=206.5
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
++...+.+|...|.+++|+|++++|++|+.|++|++||+.+++++..+.+|...+..++|+|+++.+++++. |++|+
T Consensus 56 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~ 132 (312)
T 4ery_A 56 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF---DESVR 132 (312)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET---TSCEE
T ss_pred ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC---CCcEE
Confidence 456778899999999999999999999999999999999999999999999999999999999999988764 88999
Q ss_pred EEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeec---CceeEEECCCCcEEE-EEE
Q 021669 82 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---GRPAAAYDDQGLVFA-VAF 157 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~ 157 (309)
+||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++++...+... ......+.+++.+++ ++.
T Consensus 133 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 133 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 9999999999999999999999999999999999999999999999988776554322 123456777776555 456
Q ss_pred CCEEEEEECCCCCcCCceEEEeCCCCCC---CeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceE
Q 021669 158 GGYIRMFDARKYEKGPFDIFSVGGDISD---ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 234 (309)
Q Consensus 158 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~---~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
|+.|++||++..+ ......++... +......++++++++++.||.|++||+.+++.+..+. .|...+..+
T Consensus 213 d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~ 285 (312)
T 4ery_A 213 DNTLKLWDYSKGK----CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ---GHTDVVIST 285 (312)
T ss_dssp TTEEEEEETTTTE----EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC---CCSSCEEEE
T ss_pred CCeEEEEECCCCc----EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh---ccCCcEEEE
Confidence 8999999987643 12333333322 2223334688999999999999999999999887775 356778999
Q ss_pred EECCCCCEEEEEc--CCCcEEEEECC
Q 021669 235 SFSPEGMFVISGS--GDGSVYAWSVR 258 (309)
Q Consensus 235 ~~sp~g~~l~s~s--~Dg~i~vwd~~ 258 (309)
+|+|+++++++++ .|++|++|+..
T Consensus 286 ~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 286 ACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999997 69999999974
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-35 Score=269.07 Aligned_cols=280 Identities=18% Similarity=0.351 Sum_probs=227.2
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEec--CCCEEEEEcCCCCCce
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDES 79 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~s~~g~d~~ 79 (309)
+...++.+|.+.|.+++|+|++ +|++|+.|++|++||+.+++++..+.+|...|.++++.+ ++..+++++. |++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~---d~~ 228 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR---DNT 228 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEET---TSC
T ss_pred cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcC---CCc
Confidence 4567889999999999999988 999999999999999999999999999999999999985 4556777654 889
Q ss_pred eEEEEccCCc-----------------------eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeee
Q 021669 80 LRLLSLHDNK-----------------------YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL 136 (309)
Q Consensus 80 i~~~d~~~~~-----------------------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~ 136 (309)
|++||+.+++ .+..+.+|...|.++ +++++++++++.|++|++||++++++...+
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 306 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 306 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 9999998765 256788999999987 577899999999999999999998887666
Q ss_pred eecC--ceeEEECCCCc-EEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECC
Q 021669 137 RVQG--RPAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 213 (309)
Q Consensus 137 ~~~~--~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~ 213 (309)
..+. .....+.+++. +++++.|+.|++||+++.+ .+..+.++...+.+++++ +.++++++.||.|++||+.
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE----LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAN 380 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc----EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECC
Confidence 4332 23456666665 5555568999999987643 345667787888888887 6899999999999999999
Q ss_pred CCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEE-eecCCCCCcEEEECCCeeEEEEccce-
Q 021669 214 RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVAS-WMSFDTEPPVIKWTPGSLMFVTGSSE- 291 (309)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~~p~~~~l~s~~~d- 291 (309)
++....... +...+..++|+|+++++++|+ ||.|++||+.+++.+.. +..|...|.+++|+ +..++++++.+
T Consensus 381 ~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g 454 (464)
T 3v7d_B 381 DYSRKFSYH----HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDG 454 (464)
T ss_dssp TCCEEEEEE----CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETT
T ss_pred CCceeeeec----CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCC
Confidence 877665543 234456689999999999999 89999999999999886 66788899999997 44555555544
Q ss_pred -EEEeeecC
Q 021669 292 -LSFWIPDL 299 (309)
Q Consensus 292 -~~~~~~~~ 299 (309)
..+|.+|.
T Consensus 455 ~~~i~~ldf 463 (464)
T 3v7d_B 455 QSFLEILDF 463 (464)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEeec
Confidence 56667664
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-36 Score=292.22 Aligned_cols=286 Identities=15% Similarity=0.176 Sum_probs=209.6
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCcee-----------eeeeccccceeEEEEecCC-CEEEE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL-----------KTINSKKYGVDLVCFTSHP-TTVIY 70 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~-~~~~~ 70 (309)
.+.++. |.+.|++++|+|++++|++|+.|++|++||+.++++. ..+.+|..+|..++|+|++ ..+++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 345564 7789999999999999999999999999999988764 3446677889999999965 45555
Q ss_pred EcCCCCCceeEEEEccCCceEEEeeec------------------ccCEEEEEecCCCCeEEEecCCCcEEEeeCCCcee
Q 021669 71 SSKNGWDESLRLLSLHDNKYLRYFKGH------------------HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 132 (309)
Q Consensus 71 ~s~~g~d~~i~~~d~~~~~~~~~~~~h------------------~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~ 132 (309)
++. |++| +||+++++.++.+.+| ...|++++|+|++++|+|++.||+|++||++++++
T Consensus 170 g~~---dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 170 SYE---YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp ECS---SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EeC---CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 543 8899 9999999988888766 57899999999999999999999999999876554
Q ss_pred eee--e-----e------------ecC-ceeEEE----------------------------------------------
Q 021669 133 QGL--L-----R------------VQG-RPAAAY---------------------------------------------- 146 (309)
Q Consensus 133 ~~~--~-----~------------~~~-~~~~~~---------------------------------------------- 146 (309)
... + . ... ...+.+
T Consensus 246 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~ 325 (902)
T 2oaj_A 246 IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMK 325 (902)
T ss_dssp EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHH
T ss_pred EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhh
Confidence 321 0 0 000 000000
Q ss_pred --------------------------------------------------------------------------------
Q 021669 147 -------------------------------------------------------------------------------- 146 (309)
Q Consensus 147 -------------------------------------------------------------------------------- 146 (309)
T Consensus 326 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~ 405 (902)
T 2oaj_A 326 NYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLAT 405 (902)
T ss_dssp HHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEE
T ss_pred hhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCee
Confidence
Q ss_pred --------------------------------------CCCCc-EEEEEECCEEEEEECCCCCcCCceEEE--eC-----
Q 021669 147 --------------------------------------DDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFS--VG----- 180 (309)
Q Consensus 147 --------------------------------------~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~----- 180 (309)
.+++. +++++.|++|++||+..........+. +.
T Consensus 406 ~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~ 485 (902)
T 2oaj_A 406 TSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNK 485 (902)
T ss_dssp EEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTC
T ss_pred EEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCC
Confidence 00111 222223455555555432211101111 11
Q ss_pred CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeE-------------------------------------------
Q 021669 181 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL------------------------------------------- 217 (309)
Q Consensus 181 ~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~------------------------------------------- 217 (309)
++...|.+++|||||++||+++.||+|++||..+++.
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 4556799999999999999999999999999876521
Q ss_pred --eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEE-----Eee-cCCCCCcEEEEC-----CC---
Q 021669 218 --LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA-----SWM-SFDTEPPVIKWT-----PG--- 281 (309)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~-----~~~-~~~~~v~~l~~~-----p~--- 281 (309)
+..+. .|...|.+++||||| +||+|+.|++|++||++++..+. .+. +|+..|++|+|+ ||
T Consensus 566 ~~~~~l~---~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 566 MPSTAVH---ANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEEEC---CCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSE
T ss_pred ceeEEEE---cCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCc
Confidence 22222 367889999999999 99999999999999998876553 233 889999999999 87
Q ss_pred eeEEEEccce--EEEeee
Q 021669 282 SLMFVTGSSE--LSFWIP 297 (309)
Q Consensus 282 ~~~l~s~~~d--~~~~~~ 297 (309)
++.|++|+.| +++|..
T Consensus 642 ~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 642 SILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEETTSEEEEEEE
T ss_pred ceEEEEEecCCcEEEEEE
Confidence 4899999998 555644
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.4e-36 Score=270.09 Aligned_cols=252 Identities=12% Similarity=0.163 Sum_probs=208.5
Q ss_pred cceEecCCCcceEEEEeCC-CCCEEEEeeCCCcEEEEEcCCC-------ceeeeeeccccceeEEEEecCC-CEEEEEcC
Q 021669 3 VGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHP-TTVIYSSK 73 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~~~~~s~ 73 (309)
....+.+|.+.|.+++|+| ++++|++|+.|++|+|||+.++ +++..+.+|...|..++|+|++ ..+++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3456789999999999999 9999999999999999999987 6678899999999999999998 46666654
Q ss_pred CCCCceeEEEEccCCceEEEe--eecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCc
Q 021669 74 NGWDESLRLLSLHDNKYLRYF--KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGL 151 (309)
Q Consensus 74 ~g~d~~i~~~d~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (309)
|++|++||+.+++.+..+ .+|.+.|.+++|+|+++.|++++.|+.|++||+++++....+.
T Consensus 153 ---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------------- 215 (402)
T 2aq5_A 153 ---DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD-------------- 215 (402)
T ss_dssp ---TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE--------------
T ss_pred ---CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec--------------
Confidence 889999999999999999 8899999999999999999999999999999998775433221
Q ss_pred EEEEEECCEEEEEECCCCCcCCceEEEeCCCC-CCCeEEEEccCCCEEEEE---eCCCcEEEEECCCCeE-eEEeeecCC
Q 021669 152 VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI-SDANVVKFSNDGRLMLLT---TMEGHIHVLDSFRGTL-LSTYNVKPV 226 (309)
Q Consensus 152 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~v~~s~dg~~l~~~---~~dg~v~i~d~~~~~~-~~~~~~~~~ 226 (309)
.++. ..+..++|+|++++++++ +.|+.|++||+.++.. +..... .
T Consensus 216 ----------------------------~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~ 265 (402)
T 2aq5_A 216 ----------------------------RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL--D 265 (402)
T ss_dssp ----------------------------CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC--C
T ss_pred ----------------------------cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec--c
Confidence 0011 135778999999999999 7999999999987654 333222 2
Q ss_pred CCCccceEEECCCCCEEE-EEcCCCcEEEEECCCCce-EEEeec--CCCCCcEEEECCCeeEEEEccceEEEeeecCCC
Q 021669 227 SRNSTLEASFSPEGMFVI-SGSGDGSVYAWSVRSGKE-VASWMS--FDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 301 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~-s~s~Dg~i~vwd~~~~~~-~~~~~~--~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~~~ 301 (309)
+...+..++|+|++++|+ +|+.|+.|++||+.+++. +..+.. |...+.+++|+|++.++++++..+++|.+....
T Consensus 266 ~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERK 344 (402)
T ss_dssp CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTE
T ss_pred CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCCCc
Confidence 345678899999999996 556899999999998874 555544 458999999999999999888889999876543
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-35 Score=267.94 Aligned_cols=269 Identities=15% Similarity=0.294 Sum_probs=220.0
Q ss_pred cCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC
Q 021669 8 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 87 (309)
Q Consensus 8 ~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~ 87 (309)
.+|...|.++.| ++++|++|+.|++|++||+.+++++..+.+|...|.++++ +++.+++++. |++|++||+++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~---dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS---DSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET---TSCEEEEESSS
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC---CCeEEEEECCC
Confidence 356778998877 6899999999999999999999999999999998988887 6778888764 88999999999
Q ss_pred CceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeee---eeeecCc--eeEEECCCCcEEEEEECCEEE
Q 021669 88 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG---LLRVQGR--PAAAYDDQGLVFAVAFGGYIR 162 (309)
Q Consensus 88 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~i~ 162 (309)
++.+..+.+|...|.+++|++ +.+++++.||+|++||++++.... .+..+.. ....+ +...+++++.|+.|+
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIK 279 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEE
T ss_pred CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEE
Confidence 999999999999999999974 599999999999999998776542 2221221 22333 444566666789999
Q ss_pred EEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCE
Q 021669 163 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 242 (309)
Q Consensus 163 ~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 242 (309)
+||+++.+ .+..+.++...+.++++ +++++++++.||.|++||+.+++.+..+.. |...+.+++| ++++
T Consensus 280 vwd~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 280 VWNTSTCE----FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRF--DNKR 348 (435)
T ss_dssp EEETTTCC----EEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEC--CSSE
T ss_pred EEECCcCc----EEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC---CcCcEEEEEe--cCCE
Confidence 99997643 24455567677887777 578999999999999999999998887753 5567777777 8899
Q ss_pred EEEEcCCCcEEEEECCCCc---------eEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 243 VISGSGDGSVYAWSVRSGK---------EVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 243 l~s~s~Dg~i~vwd~~~~~---------~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
|++|+.||.|++||+.+++ .+..+.+|.+.|.+++| ++++|++++.|..+.+|++
T Consensus 349 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 349 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred EEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 9999999999999997765 78889999999999999 7788999999855555554
No 75
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-35 Score=257.54 Aligned_cols=277 Identities=13% Similarity=0.117 Sum_probs=223.0
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 89 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~ 89 (309)
|.++|.+++|+|||++++++..++.+.+|+............|...|..++|+|+++.+++++ |+.+++||+.+++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----dg~i~iw~~~~~~ 83 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG----KGCVKVWDISHPG 83 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC----BSEEEEEETTSTT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC----CCeEEEEECCCCC
Confidence 567899999999999999998888887776665444444457888999999999999888764 7899999998765
Q ss_pred e---EEEee--ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceee--eeeeecC--ceeEEECCCCcEEE-EEECC
Q 021669 90 Y---LRYFK--GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ--GLLRVQG--RPAAAYDDQGLVFA-VAFGG 159 (309)
Q Consensus 90 ~---~~~~~--~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~-~~~~~ 159 (309)
. +..+. +|...|.+++|+|+++.|++++.|+.|++||+++++.. ..+.... .....+.+++.+++ ++.++
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 163 (337)
T 1gxr_A 84 NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163 (337)
T ss_dssp CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC
Confidence 3 33333 79999999999999999999999999999999887632 2222222 23456777765554 45689
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCC
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 239 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 239 (309)
.|++||++..+ ....+..+...+.+++++|+++++++++.||.|++||+.+++.+..+. +...+..++|+|+
T Consensus 164 ~v~~~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 164 NIAVWDLHNQT----LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD----FTSQIFSLGYCPT 235 (337)
T ss_dssp CEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECTT
T ss_pred cEEEEeCCCCc----eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec----CCCceEEEEECCC
Confidence 99999987642 234555677789999999999999999999999999999998887664 3456788999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 240 GMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 240 g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
++++++++.|+.|++||+.+++. ..+..|...+.+++|+|++++|++++.|..+.+|++
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 99999999999999999988765 466789999999999999999999998855544444
No 76
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.3e-35 Score=264.28 Aligned_cols=274 Identities=19% Similarity=0.349 Sum_probs=223.4
Q ss_pred cceEecCCCcce-EEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 3 VGMSFRDYNGRI-SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 3 ~~~~~~~h~~~V-~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
....+.+|.+.| .+ +++++++|++|+.|++|++||+.+++++..+.+|...|..++++ ++.+++++. |++|+
T Consensus 110 ~~~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~---dg~i~ 182 (445)
T 2ovr_B 110 SPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGST---DRTLK 182 (445)
T ss_dssp CCEEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEET---TSCEE
T ss_pred eeEEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeC---CCeEE
Confidence 456789999975 55 45568999999999999999999999999999999999999887 557777654 88999
Q ss_pred EEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCce--eEEECCCCcEEEEEECC
Q 021669 82 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFGG 159 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 159 (309)
+||+++++.+..+.+|...|.++.++ ++.+++++.||+|++||++++++...+..+... ...+ +...+++++.|+
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg 259 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDF 259 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEETTS
T ss_pred EEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEcCCC
Confidence 99999999999999999999999995 578999999999999999988877666543322 2333 455677777799
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCC
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 239 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 239 (309)
.|++||++..+ .+..+.++...+.++++ ++.++++++.||.|++||+.+++.+..+.. +...+..+. ++
T Consensus 260 ~i~iwd~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~--~~ 328 (445)
T 2ovr_B 260 MVKVWDPETET----CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG---HQSLTSGME--LK 328 (445)
T ss_dssp CEEEEEGGGTE----EEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC---CCSCEEEEE--EE
T ss_pred EEEEEECCCCc----EeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC---CcccEEEEE--Ee
Confidence 99999987532 24455667778888887 899999999999999999999998877653 334454444 46
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEeec---CCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 240 GMFVISGSGDGSVYAWSVRSGKEVASWMS---FDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 240 g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~---~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
++++++|+.||.|++||+.+++.+..+.. |...|.+++|+ ++++++|+.|..+.+|++
T Consensus 329 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 329 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 78999999999999999999999988876 88889999996 478999988844444443
No 77
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.4e-35 Score=258.13 Aligned_cols=283 Identities=12% Similarity=0.151 Sum_probs=205.5
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
.+.++.+|.+.|.+++|+|||++||+|+.| .++|||+++++++.....+ .+..+++.++++.++.++. .|++|++
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~d~~v~i 85 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTG--VKEVVHI 85 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECS--STTEEEE
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEEC--CccEEEE
Confidence 345668899999999999999999999876 5799999887766554332 4777888888887765542 3789999
Q ss_pred EEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCc-eeeeeeeecCceeEEECCCCcEEEE--EECC
Q 021669 83 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQGRPAAAYDDQGLVFAV--AFGG 159 (309)
Q Consensus 83 ~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 159 (309)
||+.+++.+..+. |...|.++.++++. ++.+ .|+.|++||+++. +....+.. ......+.+ ..++.. ..++
T Consensus 86 Wd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~-~~la~~sg~~~g 159 (355)
T 3vu4_A 86 WDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFSN-GLLVYSNEFNLG 159 (355)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEET-TEEEEEESSCTT
T ss_pred EECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEEc-cEEEEeCCCcCc
Confidence 9999999988887 77899999998764 4443 4889999999887 55544443 112233334 333332 3579
Q ss_pred EEEEEECCCCCc------CC-----ce-EEEeCCCCCCCeEEEEccCCCEEEEEeCCCc-EEEEECCCCeEeEEeeecCC
Q 021669 160 YIRMFDARKYEK------GP-----FD-IFSVGGDISDANVVKFSNDGRLMLLTTMEGH-IHVLDSFRGTLLSTYNVKPV 226 (309)
Q Consensus 160 ~i~~~d~~~~~~------~~-----~~-~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~-v~i~d~~~~~~~~~~~~~~~ 226 (309)
.|++||++.... .. .+ ...+.+|...+.+++|+|+|++|++++.|++ |++||+.+++.+.++... .
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g-~ 238 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG-L 238 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT-T
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-C
Confidence 999999876330 00 01 3456778889999999999999999999998 999999999998877521 2
Q ss_pred CCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceE--EEee---------------------cCCCCCcEEEECCCee
Q 021669 227 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV--ASWM---------------------SFDTEPPVIKWTPGSL 283 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~--~~~~---------------------~~~~~v~~l~~~p~~~ 283 (309)
|...+.+++|+|+|++|++++.|++|++||+.+.... ..+. ........++|+|+++
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~ 318 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS 318 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC
Confidence 5578899999999999999999999999999765321 1110 0112347799999999
Q ss_pred EEEEccceE--EEeee
Q 021669 284 MFVTGSSEL--SFWIP 297 (309)
Q Consensus 284 ~l~s~~~d~--~~~~~ 297 (309)
.+++++.|. ++|..
T Consensus 319 ~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 319 LVVVWPHTRMIETFKV 334 (355)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCeEEEEEE
Confidence 999999884 44543
No 78
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.1e-35 Score=274.70 Aligned_cols=287 Identities=12% Similarity=0.109 Sum_probs=236.3
Q ss_pred ccceEecCCCcc-eEEEEeCC--CCCEEEEeeCCCcEEEEEcCCC--------ceeeeeeccccceeEEEEecCCCEEEE
Q 021669 2 EVGMSFRDYNGR-ISSMDFHK--SSSYLVTASDDESIRLYDVTAA--------TCLKTINSKKYGVDLVCFTSHPTTVIY 70 (309)
Q Consensus 2 ~~~~~~~~h~~~-V~~i~~s~--~~~~l~t~s~D~~v~iWd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~ 70 (309)
+....|.+|.+. |++++|+| ++++|++|+.|++|+|||+.++ +++..+..|..++..++|+|++..+++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 567889999999 99999999 9999999999999999999755 667788888999999999999999988
Q ss_pred EcCCC-CCceeEEEEccCCceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeeecC-----cee
Q 021669 71 SSKNG-WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQG-----RPA 143 (309)
Q Consensus 71 ~s~~g-~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~-----~~~ 143 (309)
++.+. ..+.|++|| .++.+..+.+|...|.+++|+|+++ .+++++.|+.|++||+++.++...+..+. ...
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 76421 015677777 6778899999999999999999988 89999999999999999888777665332 234
Q ss_pred EEECCC-CcEEE-EEECCEEEEEECCCCCcCCceEEEe-C---CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeE
Q 021669 144 AAYDDQ-GLVFA-VAFGGYIRMFDARKYEKGPFDIFSV-G---GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL 217 (309)
Q Consensus 144 ~~~~~~-~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~-~---~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~ 217 (309)
..+.++ +.+++ ++.++.|++||++..+ .+..+ . .+...+.+++|+ +++++++++.|+.|++||+.+++.
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGE----FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCC----EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCC----EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 667777 66555 5568999999987643 23334 3 667789999999 999999999999999999999998
Q ss_pred eEEeeecC-CCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEee
Q 021669 218 LSTYNVKP-VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWI 296 (309)
Q Consensus 218 ~~~~~~~~-~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~ 296 (309)
+..+..+. .....+..+.|+ +++++++++.|+.|++||+.+++.+..+.+|...|.+++| |+ +++++.|..+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~ 361 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIME 361 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEE
T ss_pred EEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEE
Confidence 88776531 122455667774 9999999999999999999999999999999999999999 88 788887755555
Q ss_pred ecCC
Q 021669 297 PDLS 300 (309)
Q Consensus 297 ~~~~ 300 (309)
|++.
T Consensus 362 w~~~ 365 (615)
T 1pgu_A 362 WSSS 365 (615)
T ss_dssp TTTT
T ss_pred EEch
Confidence 5543
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-35 Score=260.84 Aligned_cols=245 Identities=18% Similarity=0.274 Sum_probs=198.9
Q ss_pred CCcceEEEEeCCC----CCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEec-CCCEEEEEcCCCCCceeEEEE
Q 021669 10 YNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLS 84 (309)
Q Consensus 10 h~~~V~~i~~s~~----~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~s~~g~d~~i~~~d 84 (309)
|...|.+++|+|+ +++|++|+.|++|++||+.+++++..+.+|...|..++|+| ++..+++++. |+.|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~---dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK---DHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET---TSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC---CCeEEEEE
Confidence 6688999999998 67999999999999999999999999999999999999999 8888888764 88999999
Q ss_pred ccCCceEEEe---eecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee-----------------------
Q 021669 85 LHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----------------------- 138 (309)
Q Consensus 85 ~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~----------------------- 138 (309)
+.+++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+++++....+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 9999988888 78999999999999999999999999999999987654332210
Q ss_pred -----c--CceeEEECCCCcEEEEEECCEEEEEECCCCCcC----------CceEEEeCCCCCCCeEEEEccC--CCEEE
Q 021669 139 -----Q--GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKG----------PFDIFSVGGDISDANVVKFSND--GRLML 199 (309)
Q Consensus 139 -----~--~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----------~~~~~~~~~~~~~~~~v~~s~d--g~~l~ 199 (309)
. ......+. ...+++++.|+.|++||++..... ...+.....+...+.+++|+|+ +++|+
T Consensus 225 ~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp EECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE
T ss_pred ccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE
Confidence 1 11233343 445666667899999998764320 0123445566678899999999 99999
Q ss_pred EEeCCCcEEEEECCCCeEe----EEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 200 LTTMEGHIHVLDSFRGTLL----STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 200 ~~~~dg~v~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
+++.||.|++||+.+++.. ..+..+ .+...+..++|+|++++|++++.||.|++||+.+
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLTHH-KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEECCT-TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEecCCcEEEEECCCCCCccccceEEccc-ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999999887533 233321 1257889999999999999999999999999853
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-36 Score=287.31 Aligned_cols=250 Identities=13% Similarity=0.143 Sum_probs=203.5
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcC--CCceeeeeeccccceeEEEEecC--CCEEEEEcCCCCCce
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDES 79 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g~d~~ 79 (309)
.+.+.+|+++|++++|+|++++|++|+.||+|+|||+. +++++..+.+|..+|..++|+++ +..+++++. |++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~---Dg~ 78 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK 78 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET---TSC
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC---CCe
Confidence 46789999999999999999999999999999999998 56778889999999999999988 788888764 889
Q ss_pred eEEEEccCCc--eEEEeeecccCEEEEEecCC--CCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEE
Q 021669 80 LRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV 155 (309)
Q Consensus 80 i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (309)
|++||+.+++ .+..+.+|...|.+++|+|+ ++.+++++.||+|++||++++.......
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~------------------ 140 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII------------------ 140 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE------------------
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE------------------
Confidence 9999999987 77888999999999999999 9999999999999999987653221111
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc-------------CCCEEEEEeCCCcEEEEECCCCe----Ee
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-------------DGRLMLLTTMEGHIHVLDSFRGT----LL 218 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~-------------dg~~l~~~~~dg~v~i~d~~~~~----~~ 218 (309)
..++...+.+++++| ++.++++++.||.|++||++++. ..
T Consensus 141 -----------------------~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 141 -----------------------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp -----------------------EECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred -----------------------eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee
Confidence 112334566677777 69999999999999999998763 33
Q ss_pred EEeeecCCCCCccceEEECCC---CCEEEEEcCCCcEEEEECCCCc-----eEEEeecCCCCCcEEEECCCeeEEEEccc
Q 021669 219 STYNVKPVSRNSTLEASFSPE---GMFVISGSGDGSVYAWSVRSGK-----EVASWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~sp~---g~~l~s~s~Dg~i~vwd~~~~~-----~~~~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
..+. .|...+.+++|+|+ ++++++|+.||.|++||+.+++ .+.....|...+.+++|+|+++++++++.
T Consensus 198 ~~~~---~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 198 STLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp EEEC---CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred eeec---CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 3332 46678999999999 9999999999999999998864 33334568889999999999999999999
Q ss_pred eEEEeeecCC
Q 021669 291 ELSFWIPDLS 300 (309)
Q Consensus 291 d~~~~~~~~~ 300 (309)
|..+.+|++.
T Consensus 275 Dg~I~vwd~~ 284 (753)
T 3jro_A 275 DNKVTLWKEN 284 (753)
T ss_dssp SSCEECCBCC
T ss_pred CCEEEEEecC
Confidence 8555555544
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-34 Score=256.20 Aligned_cols=253 Identities=17% Similarity=0.252 Sum_probs=203.0
Q ss_pred ceEecC-CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 4 GMSFRD-YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 4 ~~~~~~-h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
...+.. |.+.|.+++|+|++++|++|+.|++|++||+.++++++.+.+|...+..++| ++..+++++. |+.|++
T Consensus 126 ~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~i 200 (401)
T 4aez_A 126 SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR---SGAIHH 200 (401)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET---TSEEEE
T ss_pred eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC---CCCEEE
Confidence 344444 8999999999999999999999999999999999999999999999999888 4567777764 889999
Q ss_pred EEcc-CCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCC-CcEEEEEE-
Q 021669 83 LSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ-GLVFAVAF- 157 (309)
Q Consensus 83 ~d~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~- 157 (309)
||+. .+..+..+.+|.+.|.+++|+|++++|++++.|+.|++||++++++...+.... .....+.+. ..+++++.
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC
Confidence 9998 567788999999999999999999999999999999999999887766554322 335666664 45666654
Q ss_pred --CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEE--eCCCcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 158 --GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT--TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 158 --~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~--~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
|+.|++||++..+. ...+. +...+.+++|+|++++++++ +.||.|++||+.++......... .|...+..
T Consensus 281 s~d~~i~i~d~~~~~~----~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~ 354 (401)
T 4aez_A 281 TMDKQIHFWNAATGAR----VNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-AHDTRVLY 354 (401)
T ss_dssp TTTCEEEEEETTTCCE----EEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE-CCSSCCCE
T ss_pred CCCCEEEEEECCCCCE----EEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec-CCCCCEEE
Confidence 89999999876431 22222 33578999999999999995 48999999999887766554432 35678899
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEee
Q 021669 234 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM 267 (309)
Q Consensus 234 ~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~ 267 (309)
++|+|+|++|++++.||.|++||+.+++.+....
T Consensus 355 ~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 355 SALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 9999999999999999999999999988776543
No 82
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-35 Score=266.96 Aligned_cols=271 Identities=11% Similarity=0.070 Sum_probs=207.5
Q ss_pred CccceEe----cCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCC
Q 021669 1 MEVGMSF----RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 76 (309)
Q Consensus 1 ~~~~~~~----~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 76 (309)
|++++.+ +.....|.+|+|+|||+++||+|.|++|| |...++ .+.+|...+..++|+|++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg----------~ 65 (588)
T 2j04_A 1 MKLLKDLLVDRKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE----------F 65 (588)
T ss_dssp -CCCBCEEECSCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC----------C
T ss_pred CchhHhhcccHhHhhccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC----------C
Confidence 4555555 46778999999999999999999999999 765554 447899999999999987 1
Q ss_pred CceeEEEEccCCceEEEee-ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeec------CceeEEECCC
Q 021669 77 DESLRLLSLHDNKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ------GRPAAAYDDQ 149 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~------~~~~~~~~~~ 149 (309)
++.+++|+.+. ...+. +|.+.|.+++|+|+|++|++++.||+|++||.+. +...+... .....+++|+
T Consensus 66 ~~~~~~~~~~~---~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPD 140 (588)
T 2j04_A 66 ENKLDFELAQQ---NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPI 140 (588)
T ss_dssp CCTTTTSCCCS---SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSS
T ss_pred cceEEEEeCCC---ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCC
Confidence 45555555332 22233 5688999999999999999999999999999543 33333311 1345788898
Q ss_pred CcEEEEEE-CCEEEEEECCCCCcCC---ceEEEe----CCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEe---
Q 021669 150 GLVFAVAF-GGYIRMFDARKYEKGP---FDIFSV----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL--- 218 (309)
Q Consensus 150 ~~~~~~~~-~~~i~~~d~~~~~~~~---~~~~~~----~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~--- 218 (309)
+.+++++. ||+|++||+....... ..+..+ .+|...|.+++||||| +++++.|++|++||+..+...
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence 88777665 8999999987643211 123443 5677899999999999 888999999999999876632
Q ss_pred EEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEE--CCCeeEEEEccceEE-Ee
Q 021669 219 STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKW--TPGSLMFVTGSSELS-FW 295 (309)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~--~p~~~~l~s~~~d~~-~~ 295 (309)
.++. +.|...|.+++|+ |+.||+++ |++|++||+.+++......+|.+.+..++| +||++.+++++++.. +|
T Consensus 219 ~tL~--~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw 293 (588)
T 2j04_A 219 RMIQ--NASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVL 293 (588)
T ss_dssp EEEE--CCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEE
T ss_pred eeec--ccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEE
Confidence 2332 2355788999999 69999998 699999999887764444489999999999 999999999998755 77
Q ss_pred eec
Q 021669 296 IPD 298 (309)
Q Consensus 296 ~~~ 298 (309)
..+
T Consensus 294 ~~d 296 (588)
T 2j04_A 294 LED 296 (588)
T ss_dssp ESS
T ss_pred eec
Confidence 643
No 83
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.1e-35 Score=260.10 Aligned_cols=248 Identities=10% Similarity=0.123 Sum_probs=187.4
Q ss_pred EecCCCcceEEEEeCCCCCEEEE-----------eeCCCcEEEEEcCCCcee-eee--------eccccceeEEEEecCC
Q 021669 6 SFRDYNGRISSMDFHKSSSYLVT-----------ASDDESIRLYDVTAATCL-KTI--------NSKKYGVDLVCFTSHP 65 (309)
Q Consensus 6 ~~~~h~~~V~~i~~s~~~~~l~t-----------~s~D~~v~iWd~~~~~~~-~~~--------~~~~~~v~~~~~~~~~ 65 (309)
.|.+|...|.++++++ +.+++ ++.|+++|+|++.+.... ... ..+...+..++|+|++
T Consensus 68 ~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 4678889999887754 45554 456889999998754322 111 1223347889999999
Q ss_pred CEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee--cC--c
Q 021669 66 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--QG--R 141 (309)
Q Consensus 66 ~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~--~~--~ 141 (309)
+.+++++ ++.|++|++||+++++.+..+. |...|.+++|+||++++++++.|+ +++|+..+++....... +. .
T Consensus 146 ~~la~as-~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 146 TVAAIAS-SKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SCEEEEE-SCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEE
T ss_pred CEEEEEE-CCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCE
Confidence 9987765 3568999999999999888875 888999999999999999999655 55555555554432221 11 2
Q ss_pred eeEEECCCCcEEEE-EECC----EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe
Q 021669 142 PAAAYDDQGLVFAV-AFGG----YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 216 (309)
Q Consensus 142 ~~~~~~~~~~~~~~-~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~ 216 (309)
..+.+.+++..++. +.++ .+++|++............+.++...+.+++|||||++|++++.|++|+|||+.+++
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence 34566777765554 4554 688898765443333345566777889999999999999999999999999999999
Q ss_pred EeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCC
Q 021669 217 LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~ 260 (309)
++.++. ..|...|.+++|||||++|||||.|++|+|||++..
T Consensus 303 ~~~~~~--~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 303 MSKIFK--QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEET--TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEEec--CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 887653 246788999999999999999999999999999653
No 84
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-36 Score=276.14 Aligned_cols=243 Identities=15% Similarity=0.148 Sum_probs=187.9
Q ss_pred CCcceEEEEeCCCC---------CEEEE-------------------eeCCCcEEEEEcCCCcee----eeeecccccee
Q 021669 10 YNGRISSMDFHKSS---------SYLVT-------------------ASDDESIRLYDVTAATCL----KTINSKKYGVD 57 (309)
Q Consensus 10 h~~~V~~i~~s~~~---------~~l~t-------------------~s~D~~v~iWd~~~~~~~----~~~~~~~~~v~ 57 (309)
+.+.|.+++|+|++ ++||+ ++.|++|+|||+.++++. .++.+|...|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 57788899998876 45555 668899999999877653 34566677899
Q ss_pred EEEEecC------CCEEEEEcCCCCCceeEEEEccCCce-----------EEEeeecccCEEEEEecCCCCeEEEecCCC
Q 021669 58 LVCFTSH------PTTVIYSSKNGWDESLRLLSLHDNKY-----------LRYFKGHHDRVVSLSLCSSKDCFISGSLDR 120 (309)
Q Consensus 58 ~~~~~~~------~~~~~~~s~~g~d~~i~~~d~~~~~~-----------~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg 120 (309)
.++|+|+ +..+++++. |++|++||+..++. ...+.+|...|++++|++++ .|++|+.||
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~---DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg 287 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQ---EGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNG 287 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEET---TSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTS
T ss_pred EEEECCCCCCCCCCceEEEEec---CCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCC
Confidence 9999996 356666654 89999999976532 34788999999999999864 899999999
Q ss_pred cEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEE--EEccCC-CE
Q 021669 121 TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVV--KFSNDG-RL 197 (309)
Q Consensus 121 ~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v--~~s~dg-~~ 197 (309)
+|++||++++... ...+.+|...|.++ +++|+| ++
T Consensus 288 tV~lWD~~~~~~~------------------------------------------~~~~~~H~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 288 FVAEFDLTDPEVP------------------------------------------SFYDQVHDSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp EEEEEETTBCSSC------------------------------------------SEEEECSSSCEEEEEEECCTTSCCE
T ss_pred EEEEEECCCCCCc------------------------------------------eEEeecccccEEEEEEEcCCCCCeE
Confidence 9999998754210 00112344567777 578888 89
Q ss_pred EEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEE
Q 021669 198 MLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIK 277 (309)
Q Consensus 198 l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 277 (309)
|++++.|++|++||+++++.+..+..+. ....+.+++|+|+++.+++++.|++|++||+++++.+.++.+|...|.+|+
T Consensus 326 laS~S~D~tvklWD~~~~~~~~~~~~~~-~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATTKTTVSRF-RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHHCEEEEEC-SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred EEEeccCCeEEEEECCCCCccccccccc-ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEE
Confidence 9999999999999998877655443221 112467899999999999999999999999999998888999999999999
Q ss_pred ECCCeeEEEEccceEEEeeecC
Q 021669 278 WTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 278 ~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
|+|+++.|++|+.|.++.+|++
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp CCSSCCBCEEEETTTEEECCBS
T ss_pred eCCCCCeEEEEECCCEEEEEec
Confidence 9999999999999855544443
No 85
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.9e-34 Score=274.03 Aligned_cols=247 Identities=18% Similarity=0.276 Sum_probs=199.2
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
.+.+.+|...|.+++|+|++++|+||+.|++|+|||+.++++++.+.+|...|.+++|+|++..+++++. |++|++|
T Consensus 423 ~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---D~~i~iw 499 (694)
T 3dm0_A 423 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR---DRTIKLW 499 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEE
T ss_pred cceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC---CCEEEEE
Confidence 3578899999999999999999999999999999999999999999999999999999999999998875 8899999
Q ss_pred EccCCceEEEe---eecccCEEEEEecCCC--CeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEE-
Q 021669 84 SLHDNKYLRYF---KGHHDRVVSLSLCSSK--DCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAV- 155 (309)
Q Consensus 84 d~~~~~~~~~~---~~h~~~v~~v~~~~~~--~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 155 (309)
|+......... .+|...|.+++|+|++ ..|++++.|++|++||+++.++...+..+. ...+.+++++.++++
T Consensus 500 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 500 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp CTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 98665433322 4799999999999986 579999999999999999888776654332 345677787766555
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC---------
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--------- 226 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~--------- 226 (309)
+.|+.|++||++..+ .+..+. ....+.+++|+|++.++++++ ++.|++||+.++..+..+.....
T Consensus 580 ~~Dg~i~iwd~~~~~----~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 653 (694)
T 3dm0_A 580 GKDGVVLLWDLAEGK----KLYSLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNS 653 (694)
T ss_dssp ETTSBCEEEETTTTE----EEECCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC---------
T ss_pred eCCCeEEEEECCCCc----eEEEec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccccccc
Confidence 568999999997643 122232 235689999999999887765 56699999999988876643210
Q ss_pred -------CCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 227 -------SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 227 -------~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
+...+.+++|+|||++|++|+.||+|+|||+..
T Consensus 654 ~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 654 GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp -------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 011256789999999999999999999999853
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.1e-34 Score=276.83 Aligned_cols=285 Identities=17% Similarity=0.228 Sum_probs=230.0
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
+...++.+|.++|.+++|+|++++|++|+.|++|++||+.+++++..+.+|...+..++|+|++..+++++. |++|+
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~ 122 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD---DLTVK 122 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET---TSEEE
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC---CCEEE
Confidence 456788899999999999999999999999999999999999999999999999999999999999988764 88999
Q ss_pred EEEccCC-ceEEEeeecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCCceeeeeeeec---CceeEEECC--CCcEEE
Q 021669 82 LLSLHDN-KYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---GRPAAAYDD--QGLVFA 154 (309)
Q Consensus 82 ~~d~~~~-~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~ 154 (309)
+||+.++ .....+.+|...|.+++|+| +++.|++++.||+|++||++++.....+... ......+.+ ++.+++
T Consensus 123 vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp EEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred EEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 9999887 67788999999999999999 8889999999999999999877655444322 233456665 555444
Q ss_pred -EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 155 -VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 155 -~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
++.++.|++||++... ....+.++...+.+++++|+|+++++++.||.|++||..++..+..+.. +...+..
T Consensus 203 ~~~~dg~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---~~~~v~~ 275 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKS----CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV---GLERSWC 275 (814)
T ss_dssp EECTTSEEEEEETTTTE----EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC---SSSSEEE
T ss_pred EEeCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec---CCCcEEE
Confidence 4568999999987533 2445556777899999999999999999999999999999888877653 4467889
Q ss_pred EEECCCCCE-EEEEcCCCcEEEEECCCCceEEE-------------------------------------------eecC
Q 021669 234 ASFSPEGMF-VISGSGDGSVYAWSVRSGKEVAS-------------------------------------------WMSF 269 (309)
Q Consensus 234 ~~~sp~g~~-l~s~s~Dg~i~vwd~~~~~~~~~-------------------------------------------~~~~ 269 (309)
++|+|+|+. +++++.|+.+.+|++........ +..+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (814)
T 3mkq_A 276 IATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSV 355 (814)
T ss_dssp EEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCC
T ss_pred EEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCC
Confidence 999999973 24444567799999765432111 1234
Q ss_pred CCCCcEEEECCCeeEEEEccce-EEEee
Q 021669 270 DTEPPVIKWTPGSLMFVTGSSE-LSFWI 296 (309)
Q Consensus 270 ~~~v~~l~~~p~~~~l~s~~~d-~~~~~ 296 (309)
...+.+++|+|+++++++++.+ +.+|.
T Consensus 356 ~~~~~~~~~spdg~~la~~~~~~~~i~~ 383 (814)
T 3mkq_A 356 DVFPQSLAHSPNGRFVTVVGDGEYVIYT 383 (814)
T ss_dssp SSCCSEEEECTTSSEEEEEETTEEEEEE
T ss_pred ccCCceeEECCCCCEEEEecCCEEEEEE
Confidence 4568899999999998887742 55554
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-33 Score=253.71 Aligned_cols=256 Identities=16% Similarity=0.209 Sum_probs=196.8
Q ss_pred EecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEc
Q 021669 6 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 85 (309)
Q Consensus 6 ~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~ 85 (309)
.+.+|...|++|+|+|+|++||+|+.|++|+|||+.++++++.+.+|...+.++++ ++..+++++. |+.+++||.
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~---d~~i~~~d~ 216 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSR---SGHIHHHDV 216 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEET---TSEEEEEET
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeC---CCceeEeee
Confidence 34578899999999999999999999999999999999999999999877766554 5667777654 889999998
Q ss_pred cC-CceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeee----eeec--CceeEEECC-CCcEEEEE-
Q 021669 86 HD-NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL----LRVQ--GRPAAAYDD-QGLVFAVA- 156 (309)
Q Consensus 86 ~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~----~~~~--~~~~~~~~~-~~~~~~~~- 156 (309)
.. ...+..+.+|...+..+.++|+++.+++++.|+.+++||..+++.... .... ......+.+ ...+++++
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~ 296 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 296 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe
Confidence 76 456788999999999999999999999999999999999876653211 1111 122344554 34555543
Q ss_pred --ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEe--CCCcEEEEECCCCeEeEEeeecCCCCCccc
Q 021669 157 --FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 232 (309)
Q Consensus 157 --~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~--~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~ 232 (309)
.|+.|++||+++... ...+. ....+.++.++|+++.+++++ .|+.|++||..+++++.++. .|...|.
T Consensus 297 gs~D~~I~iwd~~t~~~----~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~---gH~~~V~ 368 (420)
T 4gga_A 297 GTSDRHIRIWNVCSGAC----LSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---GHTSRVL 368 (420)
T ss_dssp CTTTCEEEEEETTTTEE----EEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---CCSSCEE
T ss_pred ecCCCEEEEEeCCcccc----ceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc---CCCCCEE
Confidence 379999999876431 22222 234678899999999988765 68999999999999998876 4667899
Q ss_pred eEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCc
Q 021669 233 EASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPP 274 (309)
Q Consensus 233 ~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~ 274 (309)
+++|+|||++|+|||.|++|+|||+.+..+......+...+.
T Consensus 369 ~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 369 SLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 999999999999999999999999987766655555544333
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.2e-34 Score=254.99 Aligned_cols=251 Identities=14% Similarity=0.147 Sum_probs=207.1
Q ss_pred cceEecCCCcceEEEEeCCC----C---CEEEEeeCCCcEEEEEcCCCce-----eeeeecc-----ccceeEEEEe---
Q 021669 3 VGMSFRDYNGRISSMDFHKS----S---SYLVTASDDESIRLYDVTAATC-----LKTINSK-----KYGVDLVCFT--- 62 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~----~---~~l~t~s~D~~v~iWd~~~~~~-----~~~~~~~-----~~~v~~~~~~--- 62 (309)
+...+.+|..+|.+++|+|+ + ++|++++.|++|++||+.++++ +..+..| ...+..++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 57888999999999999999 9 9999999999999999998887 8888888 5789999999
Q ss_pred -cCCCE-EEEEcCCCCCceeEEEEccC------CceEE-----Eeee-------cccCEEEEEecCCCCeEEEecCCCcE
Q 021669 63 -SHPTT-VIYSSKNGWDESLRLLSLHD------NKYLR-----YFKG-------HHDRVVSLSLCSSKDCFISGSLDRTV 122 (309)
Q Consensus 63 -~~~~~-~~~~s~~g~d~~i~~~d~~~------~~~~~-----~~~~-------h~~~v~~v~~~~~~~~l~s~s~Dg~v 122 (309)
+++.. +++++. |+.|++||+.+ ++.+. .+.+ |...|.+++|+|++ .|++++.|+.|
T Consensus 134 ~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 134 DRLLSHRLVATDV---KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 209 (397)
T ss_dssp ----CEEEEEEET---TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE
T ss_pred CCCCceEEEEEeC---CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE
Confidence 99998 887764 78999999998 66666 7754 89999999999999 99999999999
Q ss_pred EEeeCCCceeeeeeee---c---C--ceeEEECCCCcEEEE-EEC---CEEEEEECCCCCcCCceEEEeCC---------
Q 021669 123 LLWDQRAEKCQGLLRV---Q---G--RPAAAYDDQGLVFAV-AFG---GYIRMFDARKYEKGPFDIFSVGG--------- 181 (309)
Q Consensus 123 ~~Wd~~~~~~~~~~~~---~---~--~~~~~~~~~~~~~~~-~~~---~~i~~~d~~~~~~~~~~~~~~~~--------- 181 (309)
++||++++++...+.. + . .....+.+++.++++ +.+ +.|++||++..+ .+..+.+
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~----~~~~~~~~~~~~~~~~ 285 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE----RIGSLSVPTHSSQASL 285 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC----EEEEECBC--------
T ss_pred EEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc----ccceeccCcccccccc
Confidence 9999998887776654 2 2 234567777665554 567 899999997643 2334444
Q ss_pred ----CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecC---CC---------------CCccceEEECCC
Q 021669 182 ----DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP---VS---------------RNSTLEASFSPE 239 (309)
Q Consensus 182 ----~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~---~~---------------~~~~~~~~~sp~ 239 (309)
+...+.+++|+|++++|++++.||.|++||+.+++.+..+.... .+ ...+..++|+|+
T Consensus 286 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 286 GEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred cccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence 66789999999999999999999999999999999888876210 12 677899999999
Q ss_pred C----------CEEEEEcCCCcEEEEECCCCc
Q 021669 240 G----------MFVISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 240 g----------~~l~s~s~Dg~i~vwd~~~~~ 261 (309)
| ++|++++.||.|++||+.+++
T Consensus 366 g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 366 GWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 9 799999999999999998763
No 89
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=276.33 Aligned_cols=201 Identities=10% Similarity=0.139 Sum_probs=162.0
Q ss_pred cCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC
Q 021669 8 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 87 (309)
Q Consensus 8 ~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~ 87 (309)
.+|.+.|++++|+|++++||+|+.|++|+|||..++++...+. |..+|..++|++ ++++++++. |++|++||+++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~---D~~v~lWd~~~ 88 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINA---KDTVYVLSLYS 88 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEET---TCEEEEEETTT
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEEC---cCeEEEEECCC
Confidence 4899999999999999999999999999999998877766554 567899999999 777777764 89999999999
Q ss_pred CceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeee-----------eee--cCceeEEECCC--CcE
Q 021669 88 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL-----------LRV--QGRPAAAYDDQ--GLV 152 (309)
Q Consensus 88 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~-----------~~~--~~~~~~~~~~~--~~~ 152 (309)
++.+..+. |.+.|++++|+|++++|++|+.||+|++||++++++... +.. .....+.+++. +.+
T Consensus 89 ~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 89 QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 99888886 778999999999999999999999999999988765311 000 12234566664 245
Q ss_pred EEEEECCEEEEEECCCCCcCCceEEEeCC------------------CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCC
Q 021669 153 FAVAFGGYIRMFDARKYEKGPFDIFSVGG------------------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 214 (309)
Q Consensus 153 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------------------~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~ 214 (309)
++++.|+.| +||++..+. ...+.. +...+.+++|+|+|++|++++.||+|++||+.+
T Consensus 168 ~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEI----KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEECSSCEE-EEETTTTEE----EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred EEEeCCCcE-EEECCCCce----EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 555568999 999876421 122222 235689999999999999999999999999988
Q ss_pred CeEeE
Q 021669 215 GTLLS 219 (309)
Q Consensus 215 ~~~~~ 219 (309)
++++.
T Consensus 243 g~~~~ 247 (902)
T 2oaj_A 243 GHMIM 247 (902)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 87765
No 90
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.5e-35 Score=263.21 Aligned_cols=266 Identities=12% Similarity=0.066 Sum_probs=180.9
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCcee-----eeeeccccceeEEEEec--------CCCEEEEEcCCC
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL-----KTINSKKYGVDLVCFTS--------HPTTVIYSSKNG 75 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~~~~~s~~g 75 (309)
.|.+.+....+++++.+||+|+.|++|||||+.++++. ..+.+|...|..++|+| +++.+++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~-- 164 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD-- 164 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET--
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC--
Confidence 34555555556667788999999999999999887653 45788999999999997 5667777764
Q ss_pred CCceeEEEEccCCceEEEeeecccCEEEEEecCCC-CeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEE
Q 021669 76 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 154 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (309)
|++||+||++++.++..+.+|...|.+++|+|++ ++|++++.|++|++||+++++........... .....+.
T Consensus 165 -D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~-----~~~~~~s 238 (393)
T 4gq1_A 165 -DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV-----KNPWLLT 238 (393)
T ss_dssp -TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C-----SCCCSEE
T ss_pred -CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc-----ccceEEe
Confidence 9999999999998888999999999999999987 48999999999999999887654332111000 0000010
Q ss_pred EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEc-cCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC-------
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS-NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV------- 226 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s-~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~------- 226 (309)
... . .........++...+.++.++ |||+.+++++.|+++++||+..+.....+..+..
T Consensus 239 ~~~---------~----~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~ 305 (393)
T 4gq1_A 239 LNT---------L----PLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNL 305 (393)
T ss_dssp EES---------G----GGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CC
T ss_pred ccc---------c----cceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEE
Confidence 000 0 000111223455678888886 8999999999999999999987665544321100
Q ss_pred --------CCCccceEEECC--CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce-EEEe
Q 021669 227 --------SRNSTLEASFSP--EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSFW 295 (309)
Q Consensus 227 --------~~~~~~~~~~sp--~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d-~~~~ 295 (309)
.......+.|+| ++.++++|+.||+|++||+.+++.+..+..|...|.+++|||||++||+++.+ +.+|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lv 385 (393)
T 4gq1_A 306 LPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLT 385 (393)
T ss_dssp SCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEE
T ss_pred ccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 011223345555 45678889999999999999999988888999999999999999999999887 4444
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=248.92 Aligned_cols=249 Identities=15% Similarity=0.176 Sum_probs=197.4
Q ss_pred cCCCcceEEEEeCCC---CCEEEEeeCCCcEEEEEcCCCc-eeeeeeccccceeEEE------EecCCCEEEEEcCCCCC
Q 021669 8 RDYNGRISSMDFHKS---SSYLVTASDDESIRLYDVTAAT-CLKTINSKKYGVDLVC------FTSHPTTVIYSSKNGWD 77 (309)
Q Consensus 8 ~~h~~~V~~i~~s~~---~~~l~t~s~D~~v~iWd~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~~~~~s~~g~d 77 (309)
.+|.++|.+++|+|+ +++|++|+.|++|++||+.+++ ++..+.+|...+..++ |+++++.+++++. |
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d 138 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---D 138 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET---T
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC---C
Confidence 379999999999998 6999999999999999999888 8889999999999885 4678888888764 8
Q ss_pred ceeEEEEccCCc-eEEEeeeccc----CEEEEE----ecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC-ceeEEEC
Q 021669 78 ESLRLLSLHDNK-YLRYFKGHHD----RVVSLS----LCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYD 147 (309)
Q Consensus 78 ~~i~~~d~~~~~-~~~~~~~h~~----~v~~v~----~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~-~~~~~~~ 147 (309)
+.|++||+.+++ .+..+..|.+ .+.++. |+|++++|++++.|+.|++||+++++......... .....+.
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFD 218 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEES
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcC
Confidence 899999999886 6778876665 899998 78899999999999999999999887654433322 3345666
Q ss_pred C---CCc-EEEEEECCEEEEEECCCCCcC-CceEEEeCCCCCCCeEEEEccCCC-EEEEEeCCCcEEEEECCCCe-----
Q 021669 148 D---QGL-VFAVAFGGYIRMFDARKYEKG-PFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGT----- 216 (309)
Q Consensus 148 ~---~~~-~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~dg~v~i~d~~~~~----- 216 (309)
+ ++. +++++.++.|++||++..+.. .+......++...+.+++|+|+++ ++++++.||.|++||+..+.
T Consensus 219 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 219 RKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp CSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred CCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 6 454 555566899999998764321 122223446778899999999998 89999999999999987543
Q ss_pred --------------EeEEeeecCCCCCccceEEECCCCCEEE-EEcCCCcEEEEECCCCce
Q 021669 217 --------------LLSTYNVKPVSRNSTLEASFSPEGMFVI-SGSGDGSVYAWSVRSGKE 262 (309)
Q Consensus 217 --------------~~~~~~~~~~~~~~~~~~~~sp~g~~l~-s~s~Dg~i~vwd~~~~~~ 262 (309)
.+..+. .|...+.+++|+|+|++|+ +++.|+.|++||+.+.+.
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVT---LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEE---CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCCccccccccceeeccc---cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 233333 3567889999999999998 899999999999987654
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-33 Score=250.95 Aligned_cols=278 Identities=11% Similarity=0.017 Sum_probs=216.6
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc---eeeeeeccc-----------------------------------
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAAT---CLKTINSKK----------------------------------- 53 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~---~~~~~~~~~----------------------------------- 53 (309)
.++.+++|+|+|++|+++ .++.|++||+.+|+ .+..+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578999999999966655 58899999999998 655554322
Q ss_pred -------------------cceeEEEEecCCCEE-EEEcCCCCCceeEEEEcc--CCceEEEee--ecccCEEEEEecCC
Q 021669 54 -------------------YGVDLVCFTSHPTTV-IYSSKNGWDESLRLLSLH--DNKYLRYFK--GHHDRVVSLSLCSS 109 (309)
Q Consensus 54 -------------------~~v~~~~~~~~~~~~-~~~s~~g~d~~i~~~d~~--~~~~~~~~~--~h~~~v~~v~~~~~ 109 (309)
..|.+++|+|+++.+ ++++ .|+.|++||+. +++.+..+. .|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD---SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEG---GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC---CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 258899999999986 5554 38899999999 888888886 56789999999999
Q ss_pred CCeEEEecCCCcEEEeeCCCceeee----eeeec--CceeEEECCC---Cc-EEEEEECCEEEEEECCCCCcCCceEEE-
Q 021669 110 KDCFISGSLDRTVLLWDQRAEKCQG----LLRVQ--GRPAAAYDDQ---GL-VFAVAFGGYIRMFDARKYEKGPFDIFS- 178 (309)
Q Consensus 110 ~~~l~s~s~Dg~v~~Wd~~~~~~~~----~~~~~--~~~~~~~~~~---~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~- 178 (309)
+++|++++.||.+++|++.+.+... .+..+ ....+.+.++ +. +++++.|+.|++||++.... +..
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~~ 236 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDKW 236 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEEE
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eeee
Confidence 9999999999999999998776543 22222 2234566666 64 55555689999999875431 222
Q ss_pred eCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecC----------------------CCCCccceEEE
Q 021669 179 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP----------------------VSRNSTLEASF 236 (309)
Q Consensus 179 ~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 236 (309)
..++...+.+++|+ ++++|++++.|++|++||+.+++.+..+.... .....+..++|
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 44677889999999 99999999999999999999999887775321 12245678999
Q ss_pred CCCCCEEEEEc-CCCcEEEEEC--CCC---ceEEEeecCCCCCcEEEECCCeeEEEEccce--------EEEeeecC
Q 021669 237 SPEGMFVISGS-GDGSVYAWSV--RSG---KEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--------LSFWIPDL 299 (309)
Q Consensus 237 sp~g~~l~s~s-~Dg~i~vwd~--~~~---~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--------~~~~~~~~ 299 (309)
+|++++|++++ .|+.|++|++ .++ +.+..+..| ..+.+++|+|++.+++.++.+ +++|..+.
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 99999999998 8999999999 555 566777777 789999999976666655532 57886654
No 93
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.3e-34 Score=243.48 Aligned_cols=216 Identities=15% Similarity=0.181 Sum_probs=172.2
Q ss_pred ccceEecCCCcceEEEEeCCC--CCEEEEeeCCCcEEEEEcCCCc--eeeeeeccccceeEEEEecC--CCEEEEEcCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKS--SSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH--PTTVIYSSKNG 75 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~--~~~l~t~s~D~~v~iWd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g 75 (309)
+++.+|.+|+++|.+++|+|+ +++|||||.|++|+|||+.+++ ++..+..|...|..++|+|+ +..+++++.
T Consensus 44 ~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~-- 121 (297)
T 2pm7_B 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS-- 121 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET--
T ss_pred EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC--
Confidence 456789999999999999864 8999999999999999999874 56677888889999999997 677877764
Q ss_pred CCceeEEEEccCCc--eEEEeeecccCEEEEEecCC-------------CCeEEEecCCCcEEEeeCCCceeeeeeeecC
Q 021669 76 WDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS-------------KDCFISGSLDRTVLLWDQRAEKCQGLLRVQG 140 (309)
Q Consensus 76 ~d~~i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~-------------~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~ 140 (309)
|++|++||+.++. ....+.+|...|.+++|+|+ +++|++|+.|++|++||+++++....
T Consensus 122 -d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~----- 195 (297)
T 2pm7_B 122 -DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV----- 195 (297)
T ss_dssp -TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE-----
T ss_pred -CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-----
Confidence 8899999998753 24677899999999999997 46899999999999998754321000
Q ss_pred ceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC---CEEEEEeCCCcEEEEECCCCe-
Q 021669 141 RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG---RLMLLTTMEGHIHVLDSFRGT- 216 (309)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg---~~l~~~~~dg~v~i~d~~~~~- 216 (309)
....+.+|...+.+++|+|++ .+|++++.|++|++||..+..
T Consensus 196 ----------------------------------~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 196 ----------------------------------LESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp ----------------------------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ----------------------------------EEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 011234566778999999995 899999999999999987642
Q ss_pred -EeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 217 -LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 217 -~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
..........+...+..++|+|+|++||+++.|++|++|+...
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 1111111123456788999999999999999999999999863
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=237.55 Aligned_cols=246 Identities=16% Similarity=0.204 Sum_probs=193.6
Q ss_pred cceEe--cCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 3 VGMSF--RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 3 ~~~~~--~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
+.+.+ .+|...|++++|+|++++||||+.|++|++||+.++++++.+.+|...+. ++++++..+++++. ++.+
T Consensus 57 ~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~---~~~~ 131 (318)
T 4ggc_A 57 ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSR---SGHI 131 (318)
T ss_dssp EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEET---TSEE
T ss_pred EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEec---CCce
Confidence 34444 57889999999999999999999999999999999999999999876655 45556677777664 7899
Q ss_pred EEEEccCC-ceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeee--e--c--CceeEEECC-CCcE
Q 021669 81 RLLSLHDN-KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--V--Q--GRPAAAYDD-QGLV 152 (309)
Q Consensus 81 ~~~d~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~--~--~--~~~~~~~~~-~~~~ 152 (309)
++|+...+ ..+..+.+|...+..+.+++++++|++++.|++|++||+++++...... . . ........+ ...+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 132 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE
T ss_pred EeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE
Confidence 99998765 5677889999999999999999999999999999999998765432211 1 1 112233333 3344
Q ss_pred EEEE---ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEe--CCCcEEEEECCCCeEeEEeeecCCC
Q 021669 153 FAVA---FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 153 ~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~--~dg~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
+..+ .++.|++||.+.... .....+...+..++++|++..+++++ .|+.|++||+.+++++.++. .|
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~---gH 283 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---GH 283 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---CC
T ss_pred EEEEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc---CC
Confidence 4333 358999999875432 11122345688999999999887765 78999999999999998876 36
Q ss_pred CCccceEEECCCCCEEEEEcCCCcEEEEECCCCc
Q 021669 228 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 228 ~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~ 261 (309)
...|.+++|+|||++|+|||.||+|+|||+.+.+
T Consensus 284 ~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 284 TSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp SSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred CCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 6789999999999999999999999999997654
No 95
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.4e-33 Score=254.78 Aligned_cols=249 Identities=12% Similarity=0.244 Sum_probs=203.4
Q ss_pred eEecCCCcceEEEEeCCC-CCEEEEeeCCCcEEEEEcCC----------CceeeeeeccccceeEEEEecCCC-EEEEEc
Q 021669 5 MSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTA----------ATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 72 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~-~~~l~t~s~D~~v~iWd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~s 72 (309)
..+..|.+.|++++|+|+ +.+||+++.|++|+|||+.+ ..++..+.+|...+..++|++++. .+++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445689999999999997 68999999999999999986 567788889999999999999988 677665
Q ss_pred CCCCCceeEEEEccCCce-------EEEeeecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeE
Q 021669 73 KNGWDESLRLLSLHDNKY-------LRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAA 144 (309)
Q Consensus 73 ~~g~d~~i~~~d~~~~~~-------~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~ 144 (309)
. |+.|++||+..+.. ...+.+|...|.+++|+| +++.|++++.|+.|++||+++......
T Consensus 202 ~---dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~--------- 269 (430)
T 2xyi_A 202 D---DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKP--------- 269 (430)
T ss_dssp T---TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSC---------
T ss_pred C---CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcc---------
Confidence 3 88999999987432 456779999999999999 677999999999999999986531000
Q ss_pred EECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCC-EEEEEeCCCcEEEEECCC-CeEeEEee
Q 021669 145 AYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFR-GTLLSTYN 222 (309)
Q Consensus 145 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~dg~v~i~d~~~-~~~~~~~~ 222 (309)
...+..+...+++++|+|+++ ++++++.||.|++||+++ ...+..+.
T Consensus 270 -------------------------------~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 270 -------------------------------SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp -------------------------------SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred -------------------------------eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee
Confidence 001112345688999999997 788999999999999987 45555554
Q ss_pred ecCCCCCccceEEECCCCC-EEEEEcCCCcEEEEECCC--------------CceEEEeecCCCCCcEEEECCCee-EEE
Q 021669 223 VKPVSRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRS--------------GKEVASWMSFDTEPPVIKWTPGSL-MFV 286 (309)
Q Consensus 223 ~~~~~~~~~~~~~~sp~g~-~l~s~s~Dg~i~vwd~~~--------------~~~~~~~~~~~~~v~~l~~~p~~~-~l~ 286 (309)
.|...+.+++|+|+++ +|++++.|+.|+|||+.. .+.+..+.+|...|.+++|+|+++ +++
T Consensus 319 ---~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 395 (430)
T 2xyi_A 319 ---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIIC 395 (430)
T ss_dssp ---CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEE
T ss_pred ---cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEE
Confidence 3567889999999995 699999999999999977 356677788999999999999998 899
Q ss_pred Eccce--EEEeeecC
Q 021669 287 TGSSE--LSFWIPDL 299 (309)
Q Consensus 287 s~~~d--~~~~~~~~ 299 (309)
+++.| +++|.++-
T Consensus 396 s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 396 SVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEETTSEEEEEEECH
T ss_pred EEECCCCEEEeEccc
Confidence 99887 56665543
No 96
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=260.45 Aligned_cols=265 Identities=12% Similarity=0.206 Sum_probs=201.2
Q ss_pred EeCCCCCEEEEeeCCCcEEEEEcCCCceeeee-eccccceeEEEEec-CCCEEEEEcCCCCCceeEEEEccC---Cc---
Q 021669 18 DFHKSSSYLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHD---NK--- 89 (309)
Q Consensus 18 ~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~~~s~~g~d~~i~~~d~~~---~~--- 89 (309)
.|+|++..+++++ .|+ .+++.+..+ .+|...|.+++|+| ++..+++++. |++|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~---dg~v~vwd~~~~~~~~~~~ 103 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSD---QGVIKIWNLKEIIVGEVYS 103 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEET---TSEEEEEEHHHHHTTCCCS
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecC---CceEEEeECcccccCcccc
Confidence 4677888887776 487 567888888 88889999999999 9999988864 88999999876 43
Q ss_pred eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCC---CceeeeeeeecC-------------c-eeEE--ECCCC
Q 021669 90 YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR---AEKCQGLLRVQG-------------R-PAAA--YDDQG 150 (309)
Q Consensus 90 ~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~---~~~~~~~~~~~~-------------~-~~~~--~~~~~ 150 (309)
....+ +|.+.|.+++|+|+++.|++++.||+|++||++ +++......... . .... ..+++
T Consensus 104 ~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 104 SSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp CSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred eeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC
Confidence 22233 599999999999999999999999999999985 333332221110 0 1111 23445
Q ss_pred c-EEEEEECCEEEEEECCCCCcCCceEEEeCC--CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC
Q 021669 151 L-VFAVAFGGYIRMFDARKYEKGPFDIFSVGG--DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 151 ~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
. +++++.|+.|++||++..+. +..+.+ +...+.+++|+|+++++++++.||.|++||++++..+..+.. .+
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~ 256 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLER----LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF--GD 256 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCCE----EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC--TT
T ss_pred CEEEEEeCCCeEEEEeCCCCee----eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec--CC
Confidence 4 44455689999999986432 333434 567899999999999999999999999999999998887653 23
Q ss_pred CCccceEEEC----CCCCEEEEEcCCCcEEEEECCCCceEEEeecC--------------------------CCCCcEEE
Q 021669 228 RNSTLEASFS----PEGMFVISGSGDGSVYAWSVRSGKEVASWMSF--------------------------DTEPPVIK 277 (309)
Q Consensus 228 ~~~~~~~~~s----p~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~--------------------------~~~v~~l~ 277 (309)
...+.+++|+ |++++|++|+.|+.|++||+.+++.+..+.+| ...|.+++
T Consensus 257 ~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 257 HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 4567888554 57889999999999999999999988877654 34467778
Q ss_pred ECCCeeEEEEccceEEEeeecCC
Q 021669 278 WTPGSLMFVTGSSELSFWIPDLS 300 (309)
Q Consensus 278 ~~p~~~~l~s~~~d~~~~~~~~~ 300 (309)
|+ ++++|++++.|..+.+|++.
T Consensus 337 ~~-~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 337 VS-NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp EE-TTEEEEEEGGGTEEEEEETT
T ss_pred EC-CceEEEecCCCCeEEEEECC
Confidence 87 66899999998555555443
No 97
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.4e-32 Score=237.53 Aligned_cols=250 Identities=16% Similarity=0.232 Sum_probs=201.3
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
..+++++|.+.|.+++|+|++++|++|+.|+.|++|+............+...+....+.+++..+++++. |+.+++
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~---d~~~~~ 154 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR---DKTIKL 154 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEE
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecC---CCeEEE
Confidence 35678999999999999999999999999999999999998888888888778888899999999988764 889999
Q ss_pred EEccCCce-EEEeeecccCEEEEEecCCC--CeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEE-E
Q 021669 83 LSLHDNKY-LRYFKGHHDRVVSLSLCSSK--DCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAV-A 156 (309)
Q Consensus 83 ~d~~~~~~-~~~~~~h~~~v~~v~~~~~~--~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~ 156 (309)
||+..... ...+.+|...+..++|++++ ..+++++.|++|++||++++++...+.... ...+.+.+++.++++ +
T Consensus 155 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 155 WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 99876543 44567899999999999764 478999999999999999988776654332 334667777765554 5
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeec------CCCCCc
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK------PVSRNS 230 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~------~~~~~~ 230 (309)
.|+.|++||++..+ .+..+.. ...+.+++++|++.++ +++.|+.|++||+.++..+..+... ..+...
T Consensus 235 ~Dg~i~iwd~~~~~----~~~~~~~-~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 235 KDGQAMLWDLNEGK----HLYTLDG-GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp TTCEEEEEETTTTE----EEEEEEC-SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCC
T ss_pred CCCeEEEEEeccCc----eeeeecC-CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC
Confidence 68999999987643 1222322 3568899999998765 5667999999999988877665421 235567
Q ss_pred cceEEECCCCCEEEEEcCCCcEEEEECCCCc
Q 021669 231 TLEASFSPEGMFVISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 231 ~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~ 261 (309)
|.+++|+|||++|++|+.||.|+|||+++|+
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 8899999999999999999999999999885
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=236.60 Aligned_cols=246 Identities=19% Similarity=0.233 Sum_probs=201.5
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCC---ceeeeeeccccceeEEEEecCCCEEEEEcCCCCCc
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA---TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 78 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~ 78 (309)
++...+..|.+.|.+++|+|++++|++++.|+.+++|++... +++..+..|...+..++| +++.+++++. |+
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~---d~ 124 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSW---DK 124 (313)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEET---TS
T ss_pred EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeC---CC
Confidence 345678899999999999999999999999999999998753 567788889888988888 5667777764 88
Q ss_pred eeEEEEccCCceEEEeeecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCCceeeeeeee-c--CceeEEECCCCcEEE
Q 021669 79 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRV-Q--GRPAAAYDDQGLVFA 154 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 154 (309)
.+++|| .++.+..+..|...+.++.++| +++.+++++.|+.|++||.. +....+.. . ......+.+++.+++
T Consensus 125 ~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~ 200 (313)
T 3odt_A 125 TAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGHFIS 200 (313)
T ss_dssp EEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTEEEE
T ss_pred CEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCeEEE
Confidence 999999 6778888999999999999998 89999999999999999943 33333322 1 223456667777777
Q ss_pred EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceE
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 234 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
++.++.|++||++..+ .+..+.++...+.+++|+|++ .+++++.||.|++||+.+++.+..+.. +...+..+
T Consensus 201 ~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~i~~~ 272 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGD----VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL---PAISIWSV 272 (313)
T ss_dssp EETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC---SSSCEEEE
T ss_pred ccCCCeEEEEECCchh----hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec---cCceEEEE
Confidence 7889999999997643 244555677889999999999 588999999999999999998887763 45678899
Q ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceEEE
Q 021669 235 SFSPEGMFVISGSGDGSVYAWSVRSGKEVAS 265 (309)
Q Consensus 235 ~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~ 265 (309)
+|+|+++ +++++.||.|++||+.+++.+..
T Consensus 273 ~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 273 DCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred EEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 9999998 66799999999999988766544
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1e-32 Score=244.70 Aligned_cols=242 Identities=20% Similarity=0.232 Sum_probs=187.6
Q ss_pred cCCCcceEEEEeCC-CCCEEEEeeCCCcEEEEEcCCCceeeeeecc---ccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 8 RDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSK---KYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 8 ~~h~~~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
.+|.+.|.+++|+| ++++|++++.|++|++||+.+ .++..+..+ ...+..++|+|++..+++++. |+.|++|
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~ 190 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLLL 190 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEEE
Confidence 37999999999999 789999999999999999985 555555544 367999999999999988764 8899999
Q ss_pred EccCCceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCC----ceeeeeeeecC-ceeEEECC-CCcEEE-E
Q 021669 84 SLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRA----EKCQGLLRVQG-RPAAAYDD-QGLVFA-V 155 (309)
Q Consensus 84 d~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~----~~~~~~~~~~~-~~~~~~~~-~~~~~~-~ 155 (309)
|+ +++.+..+.+|...|.+++|+|+++ +|++++.|++|++||+++ +.+...+.... .....+.+ ++.+++ +
T Consensus 191 d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 191 GL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp ET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE
T ss_pred EC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEE
Confidence 99 5778899999999999999999998 899999999999999987 44444443222 33466777 665555 5
Q ss_pred EECCEEEEEECCCCCcCCceEEEe----CCCC----------CCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEe
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSV----GGDI----------SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 221 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~----~~~~----------~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~ 221 (309)
+.|+.|++||++..+... .+... ..+. ..+..++++|+|++ +++.|+.|++||+.+++.+..+
T Consensus 270 ~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 270 DQRNEIRVYSSYDWSKPD-QIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp ESSSEEEEEETTBTTSCS-EEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred cCCCcEEEEECCCCcccc-ccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeee
Confidence 568999999998654321 11110 0111 23344667777776 7778999999999999998877
Q ss_pred eecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 222 NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
..+. +...+..++|+|+|++|++|+ |+.|++||+.+
T Consensus 347 ~~~~-~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 347 RDPN-AAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CBTT-BCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred cCCC-CCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 6422 334555669999999999997 99999999975
No 100
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-32 Score=238.55 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=207.6
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC--CCCce
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN--GWDES 79 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--g~d~~ 79 (309)
+....+.+|.+.|.+++|+|++++|++++.|++|++||+.+++++..+. +...+..++|++++..+++++.+ +.++.
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~ 143 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGS 143 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCE
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCE
Confidence 4567889999999999999999999999999999999999999998888 67789999999999999887642 12389
Q ss_pred eEEEEccCCc-----------eEEEeeeccc--CEEEEEecCCCCeEEEecCCCcEEEeeCCC-ceeeeeeeecC--cee
Q 021669 80 LRLLSLHDNK-----------YLRYFKGHHD--RVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQG--RPA 143 (309)
Q Consensus 80 i~~~d~~~~~-----------~~~~~~~h~~--~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~-~~~~~~~~~~~--~~~ 143 (309)
+++||+..++ .+..+..|.. .+.+++|+|+++.|++++.||.|++||+++ .+....+.... ...
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEE
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeE
Confidence 9999997653 3455667777 999999999999999999999999999988 56555554332 334
Q ss_pred EEECCCCcEEEE-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCC--------------cEE
Q 021669 144 AAYDDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--------------HIH 208 (309)
Q Consensus 144 ~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg--------------~v~ 208 (309)
..+.+++.++++ +.|+.|++||++..+. ..... ....+..++++|+++++++++.++ .++
T Consensus 224 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 298 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRDTNSFLVDVSTLQV----LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEAR 298 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEE
T ss_pred EEECCCCCEEEEecCCceEEEEECCCCce----eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeE
Confidence 667777765554 4689999999976432 12222 445788999999999999999988 899
Q ss_pred EEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 021669 209 VLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 262 (309)
Q Consensus 209 i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~ 262 (309)
+||..+++.+..+.. +...+..++|+|++++|++++.||.|++|++.++..
T Consensus 299 ~~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 299 FYHKIFEEEIGRVQG---HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred EEecCCCcchhheec---ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 999999998887753 557888999999999999999999999999987543
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=247.17 Aligned_cols=258 Identities=12% Similarity=0.109 Sum_probs=187.2
Q ss_pred EeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc---------CC
Q 021669 18 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH---------DN 88 (309)
Q Consensus 18 ~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~---------~~ 88 (309)
.+.+++.+|+||+.|++|++||+.+++++..+. ...+..++++|. +++++. |+++++|+.. ++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~---D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGP---CNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECS---TTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecC---CCeEEEEEccCceEEeecCCc
Confidence 445678899999999999999999999888877 345666777776 666543 8899999654 55
Q ss_pred ceEEEee-ecccCEEEEEecC--CCCeEEEecCCCcEEEeeCCCceeeeeeeec---CceeEEECCCCcEEEEE-ECCEE
Q 021669 89 KYLRYFK-GHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---GRPAAAYDDQGLVFAVA-FGGYI 161 (309)
Q Consensus 89 ~~~~~~~-~h~~~v~~v~~~~--~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i 161 (309)
+.+..+. +|.+.|.+++|+| ++++|++++.||+|++||++++++....... ....+.+.+++.+++++ .|+.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 5454444 6778999999999 9999999999999999999988875443222 23456788888877765 68999
Q ss_pred EEEECCCCCcCCceEEEeCC-CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCcc--ceEEECC
Q 021669 162 RMFDARKYEKGPFDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST--LEASFSP 238 (309)
Q Consensus 162 ~~~d~~~~~~~~~~~~~~~~-~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~--~~~~~sp 238 (309)
++||++..+.. ...+.. |...+.+++|+|+|++|++++ ++.|++||+++++....+.....+...+ ..++|+|
T Consensus 195 ~iwd~~~~~~~---~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 195 DVYNLSSPDQA---SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEEESSCTTSC---CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred EEEECCCCCCC---ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 99999875432 123344 778999999999999999999 5599999999876654433211111222 2589999
Q ss_pred CCCEEEEEcC-CCcEEEEECCCCceEEEeecCCCCCcEEEECC---CeeEEEEccce
Q 021669 239 EGMFVISGSG-DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP---GSLMFVTGSSE 291 (309)
Q Consensus 239 ~g~~l~s~s~-Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p---~~~~l~s~~~d 291 (309)
+|++|++++. |+.+++|++.+....... .++..++|+| +.+.+++++.|
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d 323 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGD 323 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEET
T ss_pred CCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecC
Confidence 9999999998 999999999765433222 2344555555 55555555544
No 102
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.5e-32 Score=244.86 Aligned_cols=281 Identities=13% Similarity=0.158 Sum_probs=218.2
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceee-----eeeccccceeEEEEecCCCEEEEEcCCCCCce
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-----TINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 79 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 79 (309)
..+..+ ..+.+++|+|++.++++++.|++|++||+.+++.++ .+.+|...+..++|++++..+++++. |+.
T Consensus 117 ~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~---d~~ 192 (433)
T 3bws_A 117 SRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ---ANA 192 (433)
T ss_dssp EEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG---GTE
T ss_pred EEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC---CCE
Confidence 344444 345689999988889999999999999999998887 44566778899999888877777653 789
Q ss_pred eEEEEccCCceEEEeeecccCEEEEEecCCCCeE-EEecCCCcEEEeeCCCceeeeeeeecCc-eeEEECCCCcEEEEEE
Q 021669 80 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVFAVAF 157 (309)
Q Consensus 80 i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 157 (309)
|++||+.+++.+..+..|...+.+++|+|+++.+ ++++.|+.|++||+++++....+..... ....+++++..+.++.
T Consensus 193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEE
Confidence 9999999999999999999999999999999877 5666899999999998887666554332 3456777775544443
Q ss_pred ---------CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCE-EEEEeCCCcEEEEECCCCeEeEEeeecCCC
Q 021669 158 ---------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL-MLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 158 ---------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~-l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
++.|++||++..+. ..... +...+..++|+|+++. +++++.++.|++||+.+++.+..+. +
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~~~~--~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~----~ 343 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDKEKL--IDTIG---PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP----V 343 (433)
T ss_dssp EESCTTCSCCEEEEEEETTTTEE--EEEEE---EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE----C
T ss_pred CCCCccccCCCeEEEEECCCCcE--Eeecc---CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec----C
Confidence 67999999875421 11111 1235678999999975 4666899999999999988877664 2
Q ss_pred CCccceEEECCCCCEEEEEcC---------------CCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccc-e
Q 021669 228 RNSTLEASFSPEGMFVISGSG---------------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS-E 291 (309)
Q Consensus 228 ~~~~~~~~~sp~g~~l~s~s~---------------Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~-d 291 (309)
...+..++|+|+|+++++++. ||.|++||+.+++.+..+..+ ..+.+++|+|+++.+++++. |
T Consensus 344 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d 422 (433)
T 3bws_A 344 FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLD 422 (433)
T ss_dssp SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCC
Confidence 345678999999999998876 579999999999988887764 47899999999998877654 6
Q ss_pred EEEeeecC
Q 021669 292 LSFWIPDL 299 (309)
Q Consensus 292 ~~~~~~~~ 299 (309)
..+.+|++
T Consensus 423 ~~i~v~~~ 430 (433)
T 3bws_A 423 HQIRVYRR 430 (433)
T ss_dssp TEEEEEEE
T ss_pred CeEEEEEe
Confidence 44444443
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-32 Score=241.39 Aligned_cols=251 Identities=11% Similarity=0.213 Sum_probs=195.0
Q ss_pred CceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc--CCceEEEeeecccCEEEEEecCC--CCeEEEecC
Q 021669 43 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYLRYFKGHHDRVVSLSLCSS--KDCFISGSL 118 (309)
Q Consensus 43 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~ 118 (309)
|++++.+.+|...|.+++|+|+++.+++++. |+.|++||+. +++.+..+.+|.+.|++++|+++ +++|++++.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEET---TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEEC---CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence 4677889999999999999999999988764 8899999998 55677889999999999999977 899999999
Q ss_pred CCcEEEeeCCCcee--eeeeeec--CceeEEECCC--Cc-EEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEE
Q 021669 119 DRTVLLWDQRAEKC--QGLLRVQ--GRPAAAYDDQ--GL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKF 191 (309)
Q Consensus 119 Dg~v~~Wd~~~~~~--~~~~~~~--~~~~~~~~~~--~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~ 191 (309)
||.|++||+++++. ...+... ....+.+.+. +. +++++.|+.|++||++..... .......+...+.+++|
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVNSASW 155 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC--CEEEEECCTTCEEEEEE
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce--eeEEecCCCCceEEEEE
Confidence 99999999988763 3333222 2234566665 54 555567899999999865322 23344566778999999
Q ss_pred cc-------------CCCEEEEEeCCCcEEEEECCCCeEeEEe-eecCCCCCccceEEECCC---CCEEEEEcCCCcEEE
Q 021669 192 SN-------------DGRLMLLTTMEGHIHVLDSFRGTLLSTY-NVKPVSRNSTLEASFSPE---GMFVISGSGDGSVYA 254 (309)
Q Consensus 192 s~-------------dg~~l~~~~~dg~v~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~sp~---g~~l~s~s~Dg~i~v 254 (309)
+| ++.++++++.||.|++||+.++...... .....|...+.+++|+|+ +++|++++.||.|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 99 7999999999999999999765432211 111245678899999999 999999999999999
Q ss_pred EECCCCce-----EEEeecCCCCCcEEEECCCeeEEEEccce--EEEeeec
Q 021669 255 WSVRSGKE-----VASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 298 (309)
Q Consensus 255 wd~~~~~~-----~~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~ 298 (309)
||+.+++. +.....|...+.+++|+|++++|++++.| +++|..+
T Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 99988642 22223488899999999999999999887 6666554
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.5e-32 Score=248.08 Aligned_cols=257 Identities=19% Similarity=0.304 Sum_probs=193.5
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
+..+++.+|.+.|.+++| ++++|++|+.|++|++||+.+++++..+.+|...+..++|+ +..+++++. |+.|+
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~---dg~i~ 236 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSK---DRSIA 236 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEET---TSCEE
T ss_pred eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeC---CCcEE
Confidence 456788999999999999 68899999999999999999999999999999889888886 457777764 88999
Q ss_pred EEEccCCceE---EEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCce--eEEECCCCcEEEEE
Q 021669 82 LLSLHDNKYL---RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVA 156 (309)
Q Consensus 82 ~~d~~~~~~~---~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 156 (309)
+||+.+++.+ ..+.+|...|.++++ ++++|++++.||+|++||++++++...+..+... ...+ ....+++++
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~g~ 313 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGS 313 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-ETTEEEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe-CCCEEEEEe
Confidence 9999887755 678899999999998 6789999999999999999998887766543322 2233 344566667
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe---------EeEEeeecCCC
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT---------LLSTYNVKPVS 227 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~---------~~~~~~~~~~~ 227 (309)
.|+.|++||+++.+ .+..+.++...+.++++ +++++++++.||.|++||+.++. .+..+. .|
T Consensus 314 ~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~---~h 384 (435)
T 1p22_A 314 SDNTIRLWDIECGA----CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV---EH 384 (435)
T ss_dssp TTSCEEEEETTTCC----EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC---CC
T ss_pred CCCeEEEEECCCCC----EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc---CC
Confidence 79999999998643 24556677778888877 89999999999999999986654 555544 35
Q ss_pred CCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECC
Q 021669 228 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP 280 (309)
Q Consensus 228 ~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p 280 (309)
...+.+++| ++++|++|+.||+|++||+.+......... ..+..++.|.+
T Consensus 385 ~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~ 434 (435)
T 1p22_A 385 SGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP-RSPSRTYTYIS 434 (435)
T ss_dssp SSCCCCEEE--CSSCEEECCSSSEEEEEC------------------------
T ss_pred CCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCC-CCCccceeeec
Confidence 677888999 789999999999999999988665444322 22444555543
No 105
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-33 Score=250.01 Aligned_cols=241 Identities=14% Similarity=0.101 Sum_probs=184.5
Q ss_pred eeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCC--ceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEee
Q 021669 49 INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN--KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 126 (309)
Q Consensus 49 ~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd 126 (309)
+..+..+|.+++|+|+++.+++++. |+.|++||+.++ +.+..+.+|.+.|.+++|+|++++|++++.|++|++||
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTA---TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCS---SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred EecCCCcEEEEEECCCCCEEEEecC---CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3445567999999999998887653 889999999988 77888999999999999999999999999999999999
Q ss_pred CCCce---eeeeeeec--CceeEEECCCCc-EEEEEECCEEEEEECCCCCcCCceEEEeCC-CCCCCeEEEEccCCCEEE
Q 021669 127 QRAEK---CQGLLRVQ--GRPAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGG-DISDANVVKFSNDGRLML 199 (309)
Q Consensus 127 ~~~~~---~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~v~~s~dg~~l~ 199 (309)
+++++ ....+... ......+.+++. +++++.|+.|++||++..+.... ...+.. +...+.+++|+|++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV-SKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC-CEEECSSCCSCEEEEEECTTSSEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee-eeEeecccCCCeEEEEEcCCCCEEE
Confidence 98876 22222211 123456666665 55556789999999876432111 233444 678899999999999999
Q ss_pred EEeCCCcEEEEECCC------------------CeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCc
Q 021669 200 LTTMEGHIHVLDSFR------------------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 200 ~~~~dg~v~i~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~ 261 (309)
+++.|+.|++||+.. ++++..+ .|...+.+++|+|+|++|++++.|++|++||+.+++
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc----cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 999999999999853 3333333 456778999999999999999999999999999988
Q ss_pred e----EEEeecCCCCCcEEEECCCeeEEEEccce-EEEeee
Q 021669 262 E----VASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSFWIP 297 (309)
Q Consensus 262 ~----~~~~~~~~~~v~~l~~~p~~~~l~s~~~d-~~~~~~ 297 (309)
. +..+..|...+.+++|+|++++|++++.+ ..+|..
T Consensus 239 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~ 279 (377)
T 3dwl_C 239 QPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQG 279 (377)
T ss_dssp SCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECC
T ss_pred CcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEe
Confidence 7 78889999999999999999999999876 445543
No 106
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.2e-32 Score=239.65 Aligned_cols=244 Identities=13% Similarity=0.120 Sum_probs=199.2
Q ss_pred eeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc--eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEee
Q 021669 49 INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 126 (309)
Q Consensus 49 ~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd 126 (309)
+..|..+|.+++|+|+++.+++++. |+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPN---NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECS---SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 3457778999999999999888754 8899999999987 8889999999999999999999999999999999999
Q ss_pred CCCceeeeeeeec----CceeEEECCCCcEEEE-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEE
Q 021669 127 QRAEKCQGLLRVQ----GRPAAAYDDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT 201 (309)
Q Consensus 127 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~ 201 (309)
+++++........ ......+.+++.++++ +.++.|++||++..............+...+.+++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 9887654443221 2234567777765555 4589999999876432111122234566789999999999999999
Q ss_pred eCCCcEEEEECC------------------CCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceE
Q 021669 202 TMEGHIHVLDSF------------------RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 263 (309)
Q Consensus 202 ~~dg~v~i~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~ 263 (309)
+.||.|++||+. .++.+..+. .+...+..++|+|++++|++++.|+.|++||+.+++.+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS---SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC---CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecC---CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 999999999953 566666554 35567889999999999999999999999999999999
Q ss_pred EEeecCCCCCcEEEECCCeeEEEEccce--EEEeeecC
Q 021669 264 ASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 299 (309)
Q Consensus 264 ~~~~~~~~~v~~l~~~p~~~~l~s~~~d--~~~~~~~~ 299 (309)
..+..|...+.+++|+|++++++++ .| +++|..+.
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999999999999999999888 44 77776544
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.2e-32 Score=248.87 Aligned_cols=248 Identities=17% Similarity=0.226 Sum_probs=178.2
Q ss_pred ceEecCCCcceEEEEeCC-CCCEEEEeeCCCcEEEEEcCCCceeeeeecc--ccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 4 GMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSK--KYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
...+.+|.+.|++|+|+| ++++|+|||.|++|+|||+.++........+ ...+..++|++++..+++++. |+.|
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg~i 233 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN---VGNV 233 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS---SSBE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC---CCcE
Confidence 345679999999999998 6899999999999999999865443333322 335678999999999988764 8899
Q ss_pred EEEEccCCceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeee---c--CceeEEECCCCc-EE
Q 021669 81 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRV---Q--GRPAAAYDDQGL-VF 153 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~---~--~~~~~~~~~~~~-~~ 153 (309)
++||+.. +.+..+.+|.+.|.+++|+|+++ +|++++.|++|++||+++.+....+.. + ....+.+++++. ++
T Consensus 234 ~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 234 ILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp EEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred eeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence 9999864 56778899999999999999876 788999999999999987665433311 1 122345667665 44
Q ss_pred EEEECCEEEEEECCCCCcCCceEEEeCCCC------CCCeEEEEccCCCEEEEEe------------CCCcEEEEECCCC
Q 021669 154 AVAFGGYIRMFDARKYEKGPFDIFSVGGDI------SDANVVKFSNDGRLMLLTT------------MEGHIHVLDSFRG 215 (309)
Q Consensus 154 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~------~~~~~v~~s~dg~~l~~~~------------~dg~v~i~d~~~~ 215 (309)
+++.|+.|++||++..+.. ..+..+. .......++|++..++++. .++.|++||..++
T Consensus 313 s~~~D~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g 388 (435)
T 4e54_B 313 TTDQKSEIRVYSASQWDCP----LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG 388 (435)
T ss_dssp EEESSSCEEEEESSSSSSE----EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC
T ss_pred EEcCCCEEEEEECCCCccc----eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC
Confidence 5557899999998865321 1111110 1122334555555555443 3357999999999
Q ss_pred eEeEEeeecCCCCCccceE-EECCCCCEEEEEcCCCcEEEEECCCCce
Q 021669 216 TLLSTYNVKPVSRNSTLEA-SFSPEGMFVISGSGDGSVYAWSVRSGKE 262 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~-~~sp~g~~l~s~s~Dg~i~vwd~~~~~~ 262 (309)
+++..+.. .+...+.++ +|+|+|++|++|+ |++|+|||+++++.
T Consensus 389 ~~~~~l~~--~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 389 KMMCQLYD--PESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CEEEEECC--SSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred cEEEEEeC--CCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 98876542 344566666 6999999999987 78999999998764
No 108
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.8e-32 Score=242.59 Aligned_cols=247 Identities=12% Similarity=0.237 Sum_probs=190.8
Q ss_pred cceEecCCC------------cceEEEEeCCCC--CEEEEeeCCCcEEEEEcCCCcee----------------------
Q 021669 3 VGMSFRDYN------------GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCL---------------------- 46 (309)
Q Consensus 3 ~~~~~~~h~------------~~V~~i~~s~~~--~~l~t~s~D~~v~iWd~~~~~~~---------------------- 46 (309)
+...+.+|. +.|.+++|+|++ .+|++++.|++|++||+.++...
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 467889998 889999999998 79999999999999999764432
Q ss_pred -----------------ee-eeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC-CceEE-------EeeecccC
Q 021669 47 -----------------KT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLR-------YFKGHHDR 100 (309)
Q Consensus 47 -----------------~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~-~~~~~-------~~~~h~~~ 100 (309)
+. ..+|...|..++|+|+++.++++ . |+.|++||+.+ ++.+. .+.+|...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D---DLRINLWHLEITDRSFNIVDIKPANMEELTEV 228 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C---SSEEEEEETTEEEEEEEEEECCCSSGGGCCCC
T ss_pred EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C---CCeEEEEECCCCCceeeeeecccccccccCcc
Confidence 12 35688889999999999988876 3 89999999984 44444 35689999
Q ss_pred EEEEEecCCC-CeEEEecCCCcEEEeeCCCcee----eeeeeec--------------CceeEEECCCCcEEEEEECCEE
Q 021669 101 VVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKC----QGLLRVQ--------------GRPAAAYDDQGLVFAVAFGGYI 161 (309)
Q Consensus 101 v~~v~~~~~~-~~l~s~s~Dg~v~~Wd~~~~~~----~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~i 161 (309)
|.+++|+|++ ++|++++.||+|++||+++++. ...+..+ ....+.+.+++.+++++.++.|
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v 308 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSV 308 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEE
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeE
Confidence 9999999998 8999999999999999988775 3344332 2345677888887877777999
Q ss_pred EEEECCCCCcCCceEEEeCCCCC---------------CCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecC-
Q 021669 162 RMFDARKYEKGPFDIFSVGGDIS---------------DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP- 225 (309)
Q Consensus 162 ~~~d~~~~~~~~~~~~~~~~~~~---------------~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~- 225 (309)
++||++.... ....+. ++.. .+..++|+|++++|++++.||.|++||+.+++.+. +..+.
T Consensus 309 ~iwd~~~~~~-~~~~~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~ 384 (447)
T 3dw8_B 309 KVWDLNMENR-PVETYQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRE 384 (447)
T ss_dssp EEEETTCCSS-CSCCEE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCST
T ss_pred EEEeCCCCcc-ccceee--ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccc
Confidence 9999986222 222222 2211 12348999999999999999999999999887653 11110
Q ss_pred -----------------------------CCCCccceEEECCCCCEEEEEcCCCcEEEEECC
Q 021669 226 -----------------------------VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 226 -----------------------------~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~ 258 (309)
.....+..++|+|++++||+++.++ +++|..+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 385 NNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 1124567899999999999998876 8888754
No 109
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=6.1e-32 Score=231.87 Aligned_cols=243 Identities=12% Similarity=0.121 Sum_probs=163.5
Q ss_pred ccceEecCCCcceEEEEeCCCC----------------CEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSS----------------SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 65 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~----------------~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~ 65 (309)
|..++++.|+.+|.+|.+.||- +.|+.++.|..++.|.+..+ +...+. .+ ++
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g--------~~~~v~--~l-~~- 144 (356)
T 2w18_A 77 EKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG--------NIKAVL--GL-TK- 144 (356)
T ss_dssp EEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE--------EEEEEE--EE-TT-
T ss_pred eeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC--------CeEEEE--ec-CC-
Confidence 5567778888777777776632 22333333333333333222 111111 11 23
Q ss_pred CEEEEEcCCCCCceeEEEEc-cCCceEEEeeecccCEEEEEecC---CCCeEEEecCCCcEEEeeCCCceeeeeeeecCc
Q 021669 66 TTVIYSSKNGWDESLRLLSL-HDNKYLRYFKGHHDRVVSLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR 141 (309)
Q Consensus 66 ~~~~~~s~~g~d~~i~~~d~-~~~~~~~~~~~h~~~v~~v~~~~---~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~ 141 (309)
..++.++..|+|+.|++|++ .+++.+..+.+|...+..++|++ ++..|+|+|.|++||+||++++++..++.....
T Consensus 145 g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~ 224 (356)
T 2w18_A 145 RRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS 224 (356)
T ss_dssp TEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-
T ss_pred CcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc
Confidence 34444444567999999999 55888889999999999999999 778999999999999999999987766532110
Q ss_pred eeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEE------------EEEeCCCcEEE
Q 021669 142 PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLM------------LLTTMEGHIHV 209 (309)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l------------~~~~~dg~v~i 209 (309)
+...+.+++|||+|.++ ++++.|++|++
T Consensus 225 ----------------------------------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 225 ----------------------------------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp ------------------------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred ----------------------------------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 01134566777777765 66888999999
Q ss_pred EECCCCeEeEEeee--cCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCc-EEEECCCeeEEE
Q 021669 210 LDSFRGTLLSTYNV--KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPP-VIKWTPGSLMFV 286 (309)
Q Consensus 210 ~d~~~~~~~~~~~~--~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~-~l~~~p~~~~l~ 286 (309)
||..++..+..+.. ...+..... ..+.++.++|+++.|++|+|||+.+++.+.++.+|...+. +++||||+++|+
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFL--EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEE--EEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE
T ss_pred EECCCCEEEEEEEeeccCCCcceeE--ccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE
Confidence 99999988765532 122333333 3333488999999999999999999999999998887655 589999999999
Q ss_pred EccceEEEeeec
Q 021669 287 TGSSELSFWIPD 298 (309)
Q Consensus 287 s~~~d~~~~~~~ 298 (309)
+|+.|.++.+|+
T Consensus 343 SGS~D~TIklWd 354 (356)
T 2w18_A 343 AGQKDGNIFVYH 354 (356)
T ss_dssp EECTTSCEEEEE
T ss_pred EEECCCcEEEec
Confidence 999994444443
No 110
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.8e-30 Score=229.36 Aligned_cols=256 Identities=12% Similarity=0.108 Sum_probs=203.0
Q ss_pred ccceEecCCCcceEEEEeCCCCCEE-EEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYL-VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l-~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
++.+.+..|. .+.+++|+|+++++ ++++.|++|++||+.++++++.+..+. .+..++|+|+++.++++.. .++.|
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~--~~~~v 98 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNM--ASSTL 98 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEET--TTTEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEEC--CCCEE
Confidence 4556677665 48999999999976 788899999999999999998888766 7899999999998876542 36899
Q ss_pred EEEEccCCceEEEeeecccCEEEEEecCCCCeE-EEecCCCcEEEeeCCCceeeeeeeecCc-eeEEECCCCcEE-EEE-
Q 021669 81 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVF-AVA- 156 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~- 156 (309)
++||+.+++.+..+..| ..+.+++|+|+++.+ ++++.|+.|++||+++++....+..... ....+.+++..+ .++
T Consensus 99 ~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp EEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeC
Confidence 99999999988877754 578999999999977 7889999999999999887776654432 345677777544 333
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEe---CCCcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT---MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~---~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
.++.|++||++..+. ...+. ....+..++|+|+|+++++++ .++.|++||+.+++.+..+..+ ..+..
T Consensus 178 ~~~~v~~~d~~~~~~----~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~ 248 (391)
T 1l0q_A 178 DSMSISVIDTVTNSV----IDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG----PDPAG 248 (391)
T ss_dssp TTTEEEEEETTTTEE----EEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC----SSEEE
T ss_pred CCCEEEEEECCCCeE----EEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC----CCccE
Confidence 468999999876421 11121 234578899999999988887 6899999999999887766532 34567
Q ss_pred EEECCCCCEE-EEEcCCCcEEEEECCCCceEEEeecCCC
Q 021669 234 ASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSFDT 271 (309)
Q Consensus 234 ~~~sp~g~~l-~s~s~Dg~i~vwd~~~~~~~~~~~~~~~ 271 (309)
++|+|+|+++ ++++.|+.|++||+.+++.+..+..|..
T Consensus 249 ~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~ 287 (391)
T 1l0q_A 249 IAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKN 287 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred EEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcC
Confidence 9999999988 6779999999999999998887765543
No 111
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.9e-33 Score=240.15 Aligned_cols=210 Identities=14% Similarity=0.203 Sum_probs=167.1
Q ss_pred cceEecCCCcceEEEEeCC--CCCEEEEeeCCCcEEEEEcCCCc--eeeeeeccccceeEEEEecC--CCEEEEEcCCCC
Q 021669 3 VGMSFRDYNGRISSMDFHK--SSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGW 76 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~--~~~~l~t~s~D~~v~iWd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g~ 76 (309)
+..+|.+|.++|.+++|+| ++++|+|||.|++|+|||+.+++ ++..+.+|...|..++|+|+ +..+++++.
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~--- 125 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS--- 125 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS---
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC---
Confidence 4567899999999999986 48999999999999999998874 56678889999999999998 567777654
Q ss_pred CceeEEEEccCCce---EEEeeecccCEEEEEecCC-----------------CCeEEEecCCCcEEEeeCCCceeeeee
Q 021669 77 DESLRLLSLHDNKY---LRYFKGHHDRVVSLSLCSS-----------------KDCFISGSLDRTVLLWDQRAEKCQGLL 136 (309)
Q Consensus 77 d~~i~~~d~~~~~~---~~~~~~h~~~v~~v~~~~~-----------------~~~l~s~s~Dg~v~~Wd~~~~~~~~~~ 136 (309)
|++|++||+..+.. ...+.+|...|.++.|+|+ +++|++|+.|++|++||++......
T Consensus 126 D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-- 203 (316)
T 3bg1_A 126 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK-- 203 (316)
T ss_dssp SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE--
T ss_pred CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc--
Confidence 89999999987632 3556789999999999997 3678888888888888875331100
Q ss_pred eecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC----CEEEEEeCCCcEEEEEC
Q 021669 137 RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG----RLMLLTTMEGHIHVLDS 212 (309)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg----~~l~~~~~dg~v~i~d~ 212 (309)
....+.+|...+.+++|+|++ ++|++++.|++|++||+
T Consensus 204 --------------------------------------~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 204 --------------------------------------EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp --------------------------------------EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred --------------------------------------eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 011223455678999999987 89999999999999998
Q ss_pred CCCe----EeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECC
Q 021669 213 FRGT----LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 213 ~~~~----~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~ 258 (309)
.+.. ....+. .+...+.+++|+|+|++||+++.|++|++|+..
T Consensus 246 ~~~~~~~~~~~~~~---~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 246 DDASSNTWSPKLLH---KFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SSTTCCCCBCCEEE---ECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCccccchhhhhhh---cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 7521 111111 245678999999999999999999999999985
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.3e-31 Score=237.77 Aligned_cols=243 Identities=14% Similarity=0.232 Sum_probs=193.6
Q ss_pred ceEEEEeCCCCCE-EEEeeCCCcEEEEEcCCC----ceeeeeeccccceeEEEEec-CCCEEEEEcCCCCCceeEEEEcc
Q 021669 13 RISSMDFHKSSSY-LVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLH 86 (309)
Q Consensus 13 ~V~~i~~s~~~~~-l~t~s~D~~v~iWd~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~~~~~s~~g~d~~i~~~d~~ 86 (309)
....++++|+... +++++.||.|+|||+.+. ..+..+.+|...|..++|+| ++..+++++. |++|++||+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE---DCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET---TSEEEEEECC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC---CCeEEEEEcc
Confidence 3445778887644 456889999999999653 34556788999999999999 8888888764 8899999998
Q ss_pred CC-------ceEEEeeecccCEEEEEecCCC-CeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEEC
Q 021669 87 DN-------KYLRYFKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFG 158 (309)
Q Consensus 87 ~~-------~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (309)
++ +.+..+.+|...|.+++|+|++ +.|++++.|++|++||++++++...+.
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------- 171 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG--------------------- 171 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC---------------------
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe---------------------
Confidence 87 6688999999999999999997 699999999999999998775432221
Q ss_pred CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCC-ccceEEEC
Q 021669 159 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN-STLEASFS 237 (309)
Q Consensus 159 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~-~~~~~~~s 237 (309)
...+...+.+++++|++++|++++.||.|++||+++++.+..+.. .+.. .+..++|+
T Consensus 172 --------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 172 --------------------PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR--PHEGTRPVHAVFV 229 (402)
T ss_dssp --------------------TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--SSCSSSCCEEEEC
T ss_pred --------------------cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc--CCCCCcceEEEEc
Confidence 012345678999999999999999999999999999998877631 2323 36789999
Q ss_pred CCCCEEEEE---cCCCcEEEEECCCCce-EEEe-ecCCCCCcEEEECCCeeEEE-Eccce--EEEeeecCCC
Q 021669 238 PEGMFVISG---SGDGSVYAWSVRSGKE-VASW-MSFDTEPPVIKWTPGSLMFV-TGSSE--LSFWIPDLSK 301 (309)
Q Consensus 238 p~g~~l~s~---s~Dg~i~vwd~~~~~~-~~~~-~~~~~~v~~l~~~p~~~~l~-s~~~d--~~~~~~~~~~ 301 (309)
|++++|++| +.|+.|++||+.+++. +... ..|...+.+++|+|+++.++ +++.| +++|......
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 999999999 8999999999988664 3332 25677899999999998775 55556 7777665443
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.1e-31 Score=232.82 Aligned_cols=278 Identities=15% Similarity=0.214 Sum_probs=187.8
Q ss_pred cCCCcceEEEEeCC-CCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCC---EEEEEcCCCCCceeEEE
Q 021669 8 RDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT---TVIYSSKNGWDESLRLL 83 (309)
Q Consensus 8 ~~h~~~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~s~~g~d~~i~~~ 83 (309)
.+|.+.|.+++|+| ++.+|++++.|++|++||+.+++++..+. +...+..+++.+.+. .+++++. |+.|++|
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~ 171 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLC 171 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES---SSSEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcC---CCeEEEE
Confidence 36999999999999 77899999999999999999998888776 445678888887543 6776654 7899999
Q ss_pred EccCCceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCce-eeeee---------------ee--cCceeE
Q 021669 84 SLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEK-CQGLL---------------RV--QGRPAA 144 (309)
Q Consensus 84 d~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~-~~~~~---------------~~--~~~~~~ 144 (309)
|+.+++.+..+.+|.+.|.+++|+|+++ .|++++.||.|++||+++.. +...+ .. ......
T Consensus 172 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 172 DLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 9999999999999999999999999988 58999999999999997654 21111 00 112345
Q ss_pred EECCCCcEEE-EEECCEEEEEECCCCCcCCceEEE-eCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 145 AYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 145 ~~~~~~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
.+.+++.+++ ++.|+.|++||+++.+........ ................+..+++++.++.|++||..+++.+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 6777776554 556899999998865431110000 00111122222333445667778889999999999999888775
Q ss_pred ecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCC-eeEEEEccce--EEEe
Q 021669 223 VKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTGSSE--LSFW 295 (309)
Q Consensus 223 ~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~-~~~l~s~~~d--~~~~ 295 (309)
.|...+.+++|+|++++|++++.||.|++||+.+++.+.....+. ....+.|. ...+.+.+.+ +++|
T Consensus 332 ---~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W 401 (408)
T 4a11_B 332 ---GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSSSDEEGGTSAW 401 (408)
T ss_dssp ---CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred ---cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecccCccCceeec
Confidence 356788899999999999999999999999999988776543322 22334453 3344444444 5555
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-32 Score=245.44 Aligned_cols=265 Identities=8% Similarity=0.013 Sum_probs=197.0
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
++++.+.+|.+.|.+++|+|+| .|+++++|+.+. ..+.++ .+...|..++|+|++..+++++. |++++
T Consensus 43 ~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~-~~~~~~-~~~~~V~~vawSPdG~~LAs~s~---dg~V~ 110 (588)
T 2j04_A 43 KYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQ-NGLLNS-QPVCYPRVCKPSPIDDWMAVLSN---NGNVS 110 (588)
T ss_dssp CCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCS-SCSSTT-SCSCCEEEEEECSSSSCEEEEET---TSCEE
T ss_pred cccceecCCCccEEEEEECCCC-------CcceEEEEeCCC-ceEeec-CCCCcEEEEEECCCCCEEEEEeC---CCcEE
Confidence 3456678999999999999999 566666665432 222333 33667999999999999998875 88999
Q ss_pred EEEccCCceEEEeeeccc-----CEEEEEecCCCCeEEEecCCCcEEEeeCCCcee-------eeeeee--c----Ccee
Q 021669 82 LLSLHDNKYLRYFKGHHD-----RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-------QGLLRV--Q----GRPA 143 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~-------~~~~~~--~----~~~~ 143 (309)
+||.++ .+..+. |.. .|.+++|+|||++|++|+.||+|++||++++.. ..++.. . ....
T Consensus 111 iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 111 VFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp EEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred EEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence 999644 666677 765 499999999999999999999999999988753 233321 1 2335
Q ss_pred EEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEe-CCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 144 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSV-GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
.+++|++ +++++.|+.+++||+....... ....+ .++...|..++|+ |+.+++++ +++|++||...+..... .
T Consensus 188 VawSPdg-Laass~D~tVrlWd~~~~~~~~-~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~-~ 261 (588)
T 2j04_A 188 IVWYEDV-LVAALSNNSVFSMTVSASSHQP-VSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSL-K 261 (588)
T ss_dssp EEEETTE-EEEEETTCCEEEECCCSSSSCC-CEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEE-E
T ss_pred EEEcCCc-EEEEeCCCeEEEEECCCCcccc-ceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEE-E
Confidence 6778888 8888889999999986543210 11223 3566789999999 68888887 69999999987776432 2
Q ss_pred ecCCCCCccceEEE--CCCCCEEEEEcCCCcEEEEECCC------Cc-----------------eEEEeecCCCCCcEEE
Q 021669 223 VKPVSRNSTLEASF--SPEGMFVISGSGDGSVYAWSVRS------GK-----------------EVASWMSFDTEPPVIK 277 (309)
Q Consensus 223 ~~~~~~~~~~~~~~--sp~g~~l~s~s~Dg~i~vwd~~~------~~-----------------~~~~~~~~~~~v~~l~ 277 (309)
. .|...+..++| +||++.++++++||+ ++|.... +. .+..+. ++..|.+++
T Consensus 262 ~--gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va 337 (588)
T 2j04_A 262 T--GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGIS 337 (588)
T ss_dssp C--SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEE
T ss_pred c--CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEEE
Confidence 1 36678899999 999999999999999 9999742 11 011111 122377899
Q ss_pred ECCCeeEEEEccce
Q 021669 278 WTPGSLMFVTGSSE 291 (309)
Q Consensus 278 ~~p~~~~l~s~~~d 291 (309)
|||||+.+|+++.-
T Consensus 338 ~SPdG~~lA~~~~i 351 (588)
T 2j04_A 338 LSPDGYSIAIVYDM 351 (588)
T ss_dssp ECTTSSEEEEEEEE
T ss_pred ECCCCCEEEEEEec
Confidence 99999999999863
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.3e-29 Score=225.00 Aligned_cols=262 Identities=14% Similarity=0.127 Sum_probs=205.6
Q ss_pred CEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEE
Q 021669 24 SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 103 (309)
Q Consensus 24 ~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~ 103 (309)
.++++++.|++|++||+.++++++.+..+.. +..++|+|+++.++++. +.|++|++||+.+++.+..+..|. .+.+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~--~~d~~i~v~d~~~~~~~~~~~~~~-~v~~ 78 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVAN--AHSNDVSIIDTATNNVIATVPAGS-SPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEE--GGGTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEEC--CCCCeEEEEECCCCeEEEEEECCC-Cccc
Confidence 4688999999999999999999998887754 78999999999875543 238899999999999888887665 8999
Q ss_pred EEecCCCCeE-EEecCCCcEEEeeCCCceeeeeeeecCc-eeEEECCCCcEE-EEE-ECCEEEEEECCCCCcCCceEEEe
Q 021669 104 LSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVF-AVA-FGGYIRMFDARKYEKGPFDIFSV 179 (309)
Q Consensus 104 v~~~~~~~~l-~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~i~~~d~~~~~~~~~~~~~~ 179 (309)
++|+|++++| ++++.|+.|++||+++++....+..... ....+++++..+ .++ .++.|++||++..+. ...+
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~ 154 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV----INTV 154 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEEE
Confidence 9999999976 5666789999999999887766654432 345677777644 333 479999999875421 1222
Q ss_pred CCCCCCCeEEEEccCCCEE-EEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEc---CCCcEEEE
Q 021669 180 GGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS---GDGSVYAW 255 (309)
Q Consensus 180 ~~~~~~~~~v~~s~dg~~l-~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s---~Dg~i~vw 255 (309)
..+ ..+..++++|+|+.+ ++++.++.|++||+.+++.+..+.. ...+..++|+|+|+++++++ .|+.|++|
T Consensus 155 ~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 155 SVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV----EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp ECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----SSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred ecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec----CCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 222 346889999999887 6778899999999999888776542 34567899999999999998 68999999
Q ss_pred ECCCCceEEEeecCCCCCcEEEECCCeeEE-EEccceEEEeeecC
Q 021669 256 SVRSGKEVASWMSFDTEPPVIKWTPGSLMF-VTGSSELSFWIPDL 299 (309)
Q Consensus 256 d~~~~~~~~~~~~~~~~v~~l~~~p~~~~l-~s~~~d~~~~~~~~ 299 (309)
|+.+++.+..+..|. .+.+++|+|+++.+ ++++.|..+.+|++
T Consensus 230 d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 230 DTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp ETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 999998888887765 57889999999766 67676644444443
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=1.4e-30 Score=225.99 Aligned_cols=256 Identities=19% Similarity=0.266 Sum_probs=167.7
Q ss_pred ccceEecCCCcceEEEEeCC--CCCEEEEeeCCCcEEEEEcCCC---------ceeeeeeccccceeEEEEecC--CCEE
Q 021669 2 EVGMSFRDYNGRISSMDFHK--SSSYLVTASDDESIRLYDVTAA---------TCLKTINSKKYGVDLVCFTSH--PTTV 68 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~--~~~~l~t~s~D~~v~iWd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~ 68 (309)
++...+.+|.+.|.+++|+| ++++|++|+.|++|++||+.++ +++..+..|...+..++|+|+ +..+
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 35677889999999999999 6999999999999999999877 557788889999999999999 8888
Q ss_pred EEEcCCCCCceeEEEEccCCceEEEee-------------ecccCEEEEEecCC---CCeEEEecCCCcEEEeeCCCcee
Q 021669 69 IYSSKNGWDESLRLLSLHDNKYLRYFK-------------GHHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRAEKC 132 (309)
Q Consensus 69 ~~~s~~g~d~~i~~~d~~~~~~~~~~~-------------~h~~~v~~v~~~~~---~~~l~s~s~Dg~v~~Wd~~~~~~ 132 (309)
++++. |+.|++||+.+++.+..+. +|...+.++.|+|+ ++.+++++.|+.+.+|+...++.
T Consensus 128 ~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (351)
T 3f3f_A 128 ACLGN---DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL 204 (351)
T ss_dssp EEEET---TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred EEecC---CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence 88764 8899999998877544433 68889999999997 88999999999998888766654
Q ss_pred eeeeeecC----ceeEEECCCC-----cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC
Q 021669 133 QGLLRVQG----RPAAAYDDQG-----LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 203 (309)
Q Consensus 133 ~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~ 203 (309)
........ ...+.+.+++ .+++++.|+.|++||++... .................++....+..+..
T Consensus 205 ~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (351)
T 3f3f_A 205 HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL----SPLASEESLTNSNMFDNSADVDMDAQGRS 280 (351)
T ss_dssp EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------
T ss_pred eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc----CccccCCcccceeccCCCccccccccccc
Confidence 22221111 1234455553 23333445666666654311 11111111112222223333333332222
Q ss_pred ----CCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEee
Q 021669 204 ----EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM 267 (309)
Q Consensus 204 ----dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~ 267 (309)
...+.+|+......+..+. .|...+.+++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 281 DSNTEEKAELQSNLQVELLSEHD---DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp ----------CCSEEEEEEEEEC---TTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred ccccceeeeecccccccEEEEEe---cccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 2233334333334444443 466789999999999999999999999999999887665543
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1e-29 Score=223.85 Aligned_cols=244 Identities=15% Similarity=0.187 Sum_probs=171.7
Q ss_pred EEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeE-EE
Q 021669 37 LYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-IS 115 (309)
Q Consensus 37 iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s 115 (309)
||+..+.++++++..|...|.+++|+|+++.+++++ +..+++||++.++.+... +...+..+.+.++++.+ ++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~----~~~~~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILST----LKSFEIYNVHPVAHIMSQ--EMRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEEC----SSEEEEEEETTEEEEEEE--ECSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEc----CCEEEEEecCCcceeeee--ecCCeEEEEEcCCCCEEEEE
Confidence 567777778888889999999999999999888775 345899999877655443 33357778888887766 67
Q ss_pred ecCCCcEEEeeCCCceeeeeeeecCc-eeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC
Q 021669 116 GSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND 194 (309)
Q Consensus 116 ~s~Dg~v~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d 194 (309)
++.|++|++||.+++++...+..... ....+.++ .+.++.++.|++||+.........+.. ....+++++
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~~~~~s~- 147 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE--FIVVSYGDVISVFKFGNPWKRITDDIR------FGGVCEFSN- 147 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSS--EEEEEETTEEEEEESSTTCCBSSCCEE------EEEEEEEET-
T ss_pred ECCccEEEEEECCCCcEEEEEECCCceEEEEEcCC--EEEEEEcCEEEEEECCCCceeeEEecc------CCceEEEEc-
Confidence 88899999999999988776654432 22334333 445567999999999865111111111 234567787
Q ss_pred CCEEEE--EeCCCcEEEEECCCCeE----------------eEEeeecCCCCCccceEEECCCCCEEEEEcCCCc-EEEE
Q 021669 195 GRLMLL--TTMEGHIHVLDSFRGTL----------------LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS-VYAW 255 (309)
Q Consensus 195 g~~l~~--~~~dg~v~i~d~~~~~~----------------~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~-i~vw 255 (309)
.+++. ++.||.|++||+.++.. +..+. .|...+.+++|+|+|++||+|+.|++ |++|
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~---~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK---AHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC------------------CCEEEC---CCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE---ccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 56665 57899999999987651 33333 46778999999999999999999999 9999
Q ss_pred ECCCCceEEEee-c-CCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 256 SVRSGKEVASWM-S-FDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 256 d~~~~~~~~~~~-~-~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
|+.+++.+.++. + |...|.+++|+|++++|++++.|..+.+|++
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 999999999998 5 9999999999999999999999855544444
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=8.5e-30 Score=221.78 Aligned_cols=255 Identities=13% Similarity=0.112 Sum_probs=191.6
Q ss_pred eeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc---eEEEeeecccCEEEEEecCCCC-eEEEecCCCc
Q 021669 46 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK---YLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRT 121 (309)
Q Consensus 46 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~---~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~ 121 (309)
++...+|...|.+++|+|++..+++++. |+.|++||+.+++ ....+.+|...|.+++|+|+++ +|++++.||.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSW---DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEET---TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcC---CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCe
Confidence 3444578888999999999999988764 8899999998877 4566679999999999999999 9999999999
Q ss_pred EEEeeC-CCceeeeeee--ecC-ceeEEECCCCcEEEEEECCEEEEEECCCCCcCC----c-eEEEeCCCCCCCeEEEEc
Q 021669 122 VLLWDQ-RAEKCQGLLR--VQG-RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGP----F-DIFSVGGDISDANVVKFS 192 (309)
Q Consensus 122 v~~Wd~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~----~-~~~~~~~~~~~~~~v~~s 192 (309)
|++||+ ++++...... ... .....+.+...+++++.|+.|++||++...... . .+..+. +...+.+++++
T Consensus 81 i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred EEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence 999999 8776533222 111 234455564556666778999999987511000 0 011122 45678999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCC-CeEeEEeeecCCCCCccceEEECC-CCCEEEEEcCCCcEEEEECCCC------ceEE
Q 021669 193 NDGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRNSTLEASFSP-EGMFVISGSGDGSVYAWSVRSG------KEVA 264 (309)
Q Consensus 193 ~dg~~l~~~~~dg~v~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~sp-~g~~l~s~s~Dg~i~vwd~~~~------~~~~ 264 (309)
|++ +++++.|+.|++||+.+ +........ ..+...+.+++|+| +++++++++.||.|++|++... +...
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEE-SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEE-CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeee-cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 988 88999999999999987 543211111 13456788999999 9999999999999999999887 7777
Q ss_pred EeecCCC---------CCcEEEECCCeeEEEEccce--EEEeeec-CCCcccccc
Q 021669 265 SWMSFDT---------EPPVIKWTPGSLMFVTGSSE--LSFWIPD-LSKLGAYVG 307 (309)
Q Consensus 265 ~~~~~~~---------~v~~l~~~p~~~~l~s~~~d--~~~~~~~-~~~~~~~~~ 307 (309)
.+..|.. .+.+++|+|++++|++++.| +++|... ...+..+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred eeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence 8888765 89999999999999999988 5555443 333444444
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=9.5e-30 Score=222.99 Aligned_cols=243 Identities=13% Similarity=0.118 Sum_probs=187.4
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEE--ecCCCEEEEEcCCCCCceeEE
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCF--TSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~s~~g~d~~i~~ 82 (309)
..+.+|.+.|.+++|+|++++|++++.|++|++||+.+++++. +..|...+..++| ++++..+++++. |+.|++
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~i~v 155 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSW---DKTLKF 155 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEET---TSEEEE
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccC---CCcEEE
Confidence 6788999999999999999999999999999999999988776 5567888999999 777777777764 889999
Q ss_pred EEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee----cCceeEEEC-CCC----cEE
Q 021669 83 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----QGRPAAAYD-DQG----LVF 153 (309)
Q Consensus 83 ~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~----~~~~~~~~~-~~~----~~~ 153 (309)
||+.+++.+..+..|. .+.++.+.+ ..+++++.|+.+++||++.......... ......... ... .++
T Consensus 156 wd~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 156 WDTRSSNPMMVLQLPE-RCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp ECSSCSSCSEEEECSS-CEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred EECCCCcEEEEEecCC-CceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 9999999888888765 666666664 5788888999999999876543222111 111112111 111 266
Q ss_pred EEEECCEEEEEECCCCCcCCceEEEeCCCCC------------CCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEe
Q 021669 154 AVAFGGYIRMFDARKYEKGPFDIFSVGGDIS------------DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 221 (309)
Q Consensus 154 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~------------~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~ 221 (309)
+++.++.|++||++..... .....+.++.. .+.+++|+|++++|++++.||.|++||+.+++++..+
T Consensus 233 ~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPA-KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEETTSEEEEEESSCSCHH-HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred EecCCCcEEEEecCCCCcc-ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 7778999999999764320 11222233322 5899999999999999999999999999999988776
Q ss_pred eecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECC
Q 021669 222 NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~ 258 (309)
. .+...+..++|+|+|++|++++.|+..+.|++-
T Consensus 312 ~---~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 312 E---QLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp C---CCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred c---CCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 5 356788999999999999999999866655543
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=244.12 Aligned_cols=216 Identities=15% Similarity=0.170 Sum_probs=177.6
Q ss_pred ccceEecCCCcceEEEEeCCC--CCEEEEeeCCCcEEEEEcCCCc--eeeeeeccccceeEEEEecC--CCEEEEEcCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKS--SSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH--PTTVIYSSKNG 75 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~--~~~l~t~s~D~~v~iWd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g 75 (309)
+..+++.+|.++|.+++|+|+ +++|+||+.||+|++||+.+++ ++..+..|...|.+++|+|+ +..+++++.
T Consensus 44 ~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~-- 121 (753)
T 3jro_A 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-- 121 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--
T ss_pred ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC--
Confidence 356788999999999999988 9999999999999999999887 67788889999999999999 888888764
Q ss_pred CCceeEEEEccCC--ceEEEeeecccCEEEEEecC-------------CCCeEEEecCCCcEEEeeCCCceeeeeeeecC
Q 021669 76 WDESLRLLSLHDN--KYLRYFKGHHDRVVSLSLCS-------------SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG 140 (309)
Q Consensus 76 ~d~~i~~~d~~~~--~~~~~~~~h~~~v~~v~~~~-------------~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~ 140 (309)
|+.|++||+.++ .....+.+|...|.++.|+| +++.|++++.||+|++||++++.....
T Consensus 122 -dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~----- 195 (753)
T 3jro_A 122 -DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV----- 195 (753)
T ss_dssp -TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEE-----
T ss_pred -CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccce-----
Confidence 889999999876 34566789999999999999 588999999999999999865421100
Q ss_pred ceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC---CCEEEEEeCCCcEEEEECCCCeE
Q 021669 141 RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDSFRGTL 217 (309)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d---g~~l~~~~~dg~v~i~d~~~~~~ 217 (309)
....+.++...+.+++|+|+ ++++++++.||.|++||..++..
T Consensus 196 ----------------------------------~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 196 ----------------------------------LESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp ----------------------------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred ----------------------------------eeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 01122345567899999999 99999999999999999987642
Q ss_pred eE--EeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 218 LS--TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 218 ~~--~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
.. .......+...+.+++|+|+|+++++|+.||.|++||+.+
T Consensus 242 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 11 1111223556788999999999999999999999999974
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=222.05 Aligned_cols=237 Identities=11% Similarity=0.157 Sum_probs=184.7
Q ss_pred cceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc---eEEEeee----------------------------------
Q 021669 54 YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK---YLRYFKG---------------------------------- 96 (309)
Q Consensus 54 ~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~---~~~~~~~---------------------------------- 96 (309)
.++.+++|+++++.+++++ ++.|++||+++++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~----~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII----KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK 80 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE----TTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe----CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCc
Confidence 4678899999999666554 5689999999998 6655553
Q ss_pred --------------------cccCEEEEEecCCCCeE-EEecCCCcEEEeeCC--Cceeeeeeee---c-CceeEEECCC
Q 021669 97 --------------------HHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQR--AEKCQGLLRV---Q-GRPAAAYDDQ 149 (309)
Q Consensus 97 --------------------h~~~v~~v~~~~~~~~l-~s~s~Dg~v~~Wd~~--~~~~~~~~~~---~-~~~~~~~~~~ 149 (309)
|.+.|++++|+|++++| ++++.||+|++||+. ++++...+.. . ....+.+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred CccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 33479999999999986 899999999999998 7766665532 1 2235677787
Q ss_pred CcEEEEE-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC---CCEEEEEeCCCcEEEEECCCCeEeEEeeecC
Q 021669 150 GLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP 225 (309)
Q Consensus 150 ~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d---g~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~ 225 (309)
+.+++++ .++.+++|++............+.++...+.+++|+|+ +++|++++.|++|++||+.++..+..+. .
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~ 238 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL--F 238 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC--C
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee--c
Confidence 7655554 57999999987654321011233346678999999999 9999999999999999999888776543 2
Q ss_pred CCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeec-------------------------CCCCCcEEEECC
Q 021669 226 VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS-------------------------FDTEPPVIKWTP 280 (309)
Q Consensus 226 ~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~-------------------------~~~~v~~l~~~p 280 (309)
.|...+.+++|+ ++++|++++.|++|++||+.+++.+..+.. ....+..++|+|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 356788999999 999999999999999999999998887753 234678899999
Q ss_pred CeeEEEEcc-ce--EEEeee
Q 021669 281 GSLMFVTGS-SE--LSFWIP 297 (309)
Q Consensus 281 ~~~~l~s~~-~d--~~~~~~ 297 (309)
+++++++++ .+ +++|..
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe
Confidence 999988887 55 666655
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1e-29 Score=226.80 Aligned_cols=222 Identities=9% Similarity=0.035 Sum_probs=155.2
Q ss_pred ceEecCCCcceEEEEeCC--------CCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCC-EEEEEcCC
Q 021669 4 GMSFRDYNGRISSMDFHK--------SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSSKN 74 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~--------~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~s~~ 74 (309)
+..+.+|++.|++|+|+| |+++|||||.|++|||||+.++.++..+..|...+..++|+|++. .+++++.
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~- 207 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER- 207 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET-
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC-
Confidence 345789999999999998 889999999999999999998888888888888999999999876 4555543
Q ss_pred CCCceeEEEEccCCceEEE-------------------------eeecccCEEEEEec-CCCCeEEEecCCCcEEEeeCC
Q 021669 75 GWDESLRLLSLHDNKYLRY-------------------------FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 128 (309)
Q Consensus 75 g~d~~i~~~d~~~~~~~~~-------------------------~~~h~~~v~~v~~~-~~~~~l~s~s~Dg~v~~Wd~~ 128 (309)
|++|++||+.+++.... ..+|...+.++.|+ +|++.+++++.|+++++||++
T Consensus 208 --d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 208 --NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp --TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred --CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence 89999999987754322 34688889999987 799999999999999999998
Q ss_pred CceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc--CCCEEEEEeCCCc
Q 021669 129 AEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN--DGRLMLLTTMEGH 206 (309)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~--dg~~l~~~~~dg~ 206 (309)
.++....+.... ..++..... +. ..........+ ...++| ++.++++++.||+
T Consensus 286 ~~~~~~~l~~~~--------------------~~~~~~~~~--~~--~~~~~~~~~~~-~~~~~~~~~~~~~~sgs~Dg~ 340 (393)
T 4gq1_A 286 ANNDYNEISDST--------------------MKLGPKNLL--PN--VQGISLFPSLL-GACPHPRYMDYFATAHSQHGL 340 (393)
T ss_dssp --------------------------------------CCS--CS--EEEECSSCCSS-CCEECSSCTTEEEEEETTTTE
T ss_pred cCCCCceEeeec--------------------CccccEEEc--cc--cccccccCcce-eEEEccCCCCEEEEEECCCCE
Confidence 765443322110 011111000 00 11111111122 233443 4556777888999
Q ss_pred EEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEEC
Q 021669 207 IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV 257 (309)
Q Consensus 207 v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~ 257 (309)
|++||..++........ +..+|.+++|||||++||+++.|| +.+|.+
T Consensus 341 V~lwd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 341 IQLINTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEEETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEEEECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 99999999887765543 456789999999999999999777 666654
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.4e-28 Score=211.09 Aligned_cols=202 Identities=9% Similarity=0.110 Sum_probs=148.2
Q ss_pred CCcceEEEEeCCC----CCEEEEee--------------------CCCcEEEEEc-CCCceeeeeeccccceeEEEEec-
Q 021669 10 YNGRISSMDFHKS----SSYLVTAS--------------------DDESIRLYDV-TAATCLKTINSKKYGVDLVCFTS- 63 (309)
Q Consensus 10 h~~~V~~i~~s~~----~~~l~t~s--------------------~D~~v~iWd~-~~~~~~~~~~~~~~~v~~~~~~~- 63 (309)
|..+|.+++|+|| +.++++++ .|++|++|++ .+|+.+..+..|...+..++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 5567888888888 77777655 3999999999 45888888888888899999998
Q ss_pred --CCCEEEEEcCCCCCceeEEEEccCCceEEEeeeccc---CEEEEEecCCCCeE------------EEecCCCcEEEee
Q 021669 64 --HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD---RVVSLSLCSSKDCF------------ISGSLDRTVLLWD 126 (309)
Q Consensus 64 --~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l------------~s~s~Dg~v~~Wd 126 (309)
+++.+++++. |++||+||+++++.++++.+|.. .+.+++|+|+++++ +||+.|+++++||
T Consensus 190 ~g~~~~LaSgS~---D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 190 QGMQEALLGTTI---MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp ETSTTEEEEEET---TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred CCCCceEEEecC---CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 6677887764 99999999999999999987654 57778999999877 4566677777777
Q ss_pred CCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCc
Q 021669 127 QRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH 206 (309)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~ 206 (309)
..++++...+.. .+ ..++... .+..+.++.++++++.|++
T Consensus 267 ~~tgk~l~v~~~--------------------------~~------------p~Gh~~~--~lsg~~sg~~lASgS~DgT 306 (356)
T 2w18_A 267 PKTTLSVGVMLY--------------------------CL------------PPGQAGR--FLEGDVKDHCAAAILTSGT 306 (356)
T ss_dssp TTTTEEEEEEEE--------------------------CC------------CTTCCCC--EEEEEEETTEEEEEETTSC
T ss_pred CCCCEEEEEEEe--------------------------ec------------cCCCcce--eEccccCCCEEEEEcCCCc
Confidence 766654322110 00 0111111 2334445889999999999
Q ss_pred EEEEECCCCeEeEEeeecCCCCCccc-eEEECCCCCEEEEEcCCCcEEEEEC
Q 021669 207 IHVLDSFRGTLLSTYNVKPVSRNSTL-EASFSPEGMFVISGSGDGSVYAWSV 257 (309)
Q Consensus 207 v~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~sp~g~~l~s~s~Dg~i~vwd~ 257 (309)
|+|||+.+++.+.++.. |...+. .++|||||++|+||+.|++|+|||+
T Consensus 307 IkIWDl~tGk~l~tL~g---H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 307 IAIWDLLLGQCTALLPP---VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTTCSEEEEECC---C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcEEEEecC---CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999988753 333344 5899999999999999999999996
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=5.6e-28 Score=217.11 Aligned_cols=286 Identities=13% Similarity=0.098 Sum_probs=208.9
Q ss_pred CCcceEEEEeCCCCC-EEEEee----CCC----cEEEEEc--CCCcee--eeeeccccceeEEEEec-------------
Q 021669 10 YNGRISSMDFHKSSS-YLVTAS----DDE----SIRLYDV--TAATCL--KTINSKKYGVDLVCFTS------------- 63 (309)
Q Consensus 10 h~~~V~~i~~s~~~~-~l~t~s----~D~----~v~iWd~--~~~~~~--~~~~~~~~~v~~~~~~~------------- 63 (309)
+...+....|.+.|. ++++|+ .|| +++|||+ .+++++ ..+.+|...+..+++.+
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 345677788888774 566887 467 9999999 899887 45777777666666553
Q ss_pred -CCCEEEEEcCCCCC---ceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCC---cEEEeeCCCceeeeee
Q 021669 64 -HPTTVIYSSKNGWD---ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR---TVLLWDQRAEKCQGLL 136 (309)
Q Consensus 64 -~~~~~~~~s~~g~d---~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg---~v~~Wd~~~~~~~~~~ 136 (309)
.+..+++++..+.+ ++|++||+.. ...+.+.+|.+.+.+++|+||++.|++++.|+ .|++||++++++....
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA 219 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee
Confidence 15566666543223 7999999974 45778889999999999999999999999885 9999999988765433
Q ss_pred eecC-ceeEEECCCCcEEE-EEE-C--CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC-CC--cEE
Q 021669 137 RVQG-RPAAAYDDQGLVFA-VAF-G--GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM-EG--HIH 208 (309)
Q Consensus 137 ~~~~-~~~~~~~~~~~~~~-~~~-~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~-dg--~v~ 208 (309)
.... .....++|++..++ ++. + ..|++||++..+ ...+..+...+..++|+|||+.|+.++. ++ .|+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-----IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-----EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 3222 33567888887665 332 3 469999987533 2344455567889999999999988876 44 677
Q ss_pred EEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCC---CcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEE
Q 021669 209 VLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD---GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF 285 (309)
Q Consensus 209 i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D---g~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l 285 (309)
+||+.+++... +. .+...+..++|+|||++|++++.+ ..|++||+.+++. ..+..+. .+.+++|+||++.|
T Consensus 295 ~~d~~~~~~~~-l~---~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l 368 (415)
T 2hqs_A 295 KVNINGGAPQR-IT---WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMV 368 (415)
T ss_dssp EEETTSSCCEE-CC---CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEE
T ss_pred EEECCCCCEEE-Ee---cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEE
Confidence 88988776432 21 133456789999999999998865 5899999998876 4455554 78999999999999
Q ss_pred EEccceE---EEeeecC--CCcccccc
Q 021669 286 VTGSSEL---SFWIPDL--SKLGAYVG 307 (309)
Q Consensus 286 ~s~~~d~---~~~~~~~--~~~~~~~~ 307 (309)
+.++.+. .+|.+++ ..+..+.+
T Consensus 369 ~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred EEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 8888653 6666654 33444433
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.1e-27 Score=215.44 Aligned_cols=242 Identities=12% Similarity=0.185 Sum_probs=195.2
Q ss_pred EecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEc
Q 021669 6 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 85 (309)
Q Consensus 6 ~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~ 85 (309)
.+.+|.+.|.+++|+|+++++++++.|++|++||+.+++++..+..+...+..++|+++++.++++.. .|+.|++||+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~i~~~d~ 241 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW--ISEDISVIDR 241 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET--TTTEEEEEET
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec--CCCcEEEEEC
Confidence 35689999999999999999999999999999999999999999888888999999999998866542 3789999999
Q ss_pred cCCceEEEeeecccCEEEEEecCCCCeEEEec--------CCCcEEEeeCCCceeeeeeeecC-ceeEEECCCCc-EEEE
Q 021669 86 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS--------LDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGL-VFAV 155 (309)
Q Consensus 86 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--------~Dg~v~~Wd~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~ 155 (309)
.+++.+..+..+ ..+.+++|+|+++.+++++ .|+.|++||+++++....+.... .....+.+++. ++.+
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 242 KTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE
T ss_pred CCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE
Confidence 999888877765 4589999999999999888 48999999999887766553322 23456777774 4444
Q ss_pred -EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC---------------CCcEEEEECCCCeEeE
Q 021669 156 -AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM---------------EGHIHVLDSFRGTLLS 219 (309)
Q Consensus 156 -~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~---------------dg~v~i~d~~~~~~~~ 219 (309)
..++.|++||+...+. ...+. ....+..++++|+|+++++++. ||.|++||..+++.+.
T Consensus 321 ~~~~~~v~v~d~~~~~~----~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKV----QKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp ETTTTEEEEEETTTTEE----EEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred ecCCCEEEEEECCCCcE----EEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 4579999999875321 11221 3356789999999998888776 5799999999999887
Q ss_pred EeeecCCCCCccceEEECCCCCEEEEEcC-CCcEEEEECCC
Q 021669 220 TYNVKPVSRNSTLEASFSPEGMFVISGSG-DGSVYAWSVRS 259 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~sp~g~~l~s~s~-Dg~i~vwd~~~ 259 (309)
.+.. ...+..++|+|+|++|++++. |+.|++|++..
T Consensus 396 ~~~~----~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 396 FWEA----GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEC----SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EecC----CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 7653 245678999999999998864 99999999864
No 126
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=4.5e-28 Score=218.63 Aligned_cols=210 Identities=22% Similarity=0.292 Sum_probs=170.9
Q ss_pred ccceEecCCCcceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCce-------eeeeeccccceeEEEEec-CCCEEEEEc
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATC-------LKTINSKKYGVDLVCFTS-HPTTVIYSS 72 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~~~~~s 72 (309)
+...++.+|.+.|.+++|+|++. +|++|+.|++|++||+.++.. ...+..|...|..++|+| ++..+++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 45678899999999999999998 999999999999999987432 355668888899999999 455566654
Q ss_pred CCCCCceeEEEEccCC---ceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCce-eeeeeeecCceeEEEC
Q 021669 73 KNGWDESLRLLSLHDN---KYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEK-CQGLLRVQGRPAAAYD 147 (309)
Q Consensus 73 ~~g~d~~i~~~d~~~~---~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~-~~~~~~~~~~~~~~~~ 147 (309)
. |+.|++||+.++ +.+..+..|...|++++|+|+++ .|++++.||+|++||+++.. +..
T Consensus 252 ~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~------------- 315 (430)
T 2xyi_A 252 D---DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH------------- 315 (430)
T ss_dssp T---TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE-------------
T ss_pred C---CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE-------------
Confidence 3 889999999876 57778889999999999999887 68899999999999987632 111
Q ss_pred CCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCC-EEEEEeCCCcEEEEECCCC-----------
Q 021669 148 DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRG----------- 215 (309)
Q Consensus 148 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~dg~v~i~d~~~~----------- 215 (309)
.+..+...+.+++|+|+++ ++++++.|+.|++||+...
T Consensus 316 ------------------------------~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 365 (430)
T 2xyi_A 316 ------------------------------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 365 (430)
T ss_dssp ------------------------------EEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHH
T ss_pred ------------------------------EeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcccccc
Confidence 1112345688999999995 7899999999999998762
Q ss_pred ---eEeEEeeecCCCCCccceEEECCCCC-EEEEEcCCCcEEEEECCCC
Q 021669 216 ---TLLSTYNVKPVSRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~sp~g~-~l~s~s~Dg~i~vwd~~~~ 260 (309)
.++..+ ..|...+..++|+|+++ +|++++.|+.|+||++.+.
T Consensus 366 ~~~~~~~~~---~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 366 GPPELLFIH---GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCTTEEEEC---CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCcceEEEc---CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 333332 34567789999999999 9999999999999999753
No 127
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8e-28 Score=210.47 Aligned_cols=235 Identities=11% Similarity=0.058 Sum_probs=174.8
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcC---------CCceeeeee-ccccceeEEEEec--CCCEEEEEcCCCCCc
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVT---------AATCLKTIN-SKKYGVDLVCFTS--HPTTVIYSSKNGWDE 78 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~s~~g~d~ 78 (309)
.+.|.++.|+|+ ++|++.|++|++|+.. +++.++.+. .|...|..++++| +++.+++++. |+
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~---dg 149 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADN---RG 149 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEET---TC
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC---CC
Confidence 467788889987 9999999999999765 444444444 4556799999999 9999888764 88
Q ss_pred eeEEEEccCCceEEEeee-cccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceee-eeeee-c--CceeEEECCCCcEE
Q 021669 79 SLRLLSLHDNKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-GLLRV-Q--GRPAAAYDDQGLVF 153 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~-~~~~~-~--~~~~~~~~~~~~~~ 153 (309)
+|++||+++++.+..+.. |...|.+++|+|++++|++|+.||+|++||+++++.. ..+.. + ....+.+.+++.++
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEE
Confidence 999999999988777644 4558999999999999999999999999999988766 44444 2 23456788888888
Q ss_pred EEEECCEEEEEECCCCCcCCceEEEeCCCCCCC--eEEEEccCCCEEEEEeC-CCcEEEEECCCCeEeEEeeecCCCCCc
Q 021669 154 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDA--NVVKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPVSRNS 230 (309)
Q Consensus 154 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~--~~v~~s~dg~~l~~~~~-dg~v~i~d~~~~~~~~~~~~~~~~~~~ 230 (309)
+++.++.|++||+++.+.. ..+..+..+...+ .+++|+|+|+++++++. |+.|++|+..+....-.. ..
T Consensus 230 ~s~~~~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~-------~~ 301 (343)
T 3lrv_A 230 VVECDQTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK-------DE 301 (343)
T ss_dssp EEEESSBEEEEETTSSTTC-BSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE-------EE
T ss_pred EEEeCCeEEEEEcCCCCcc-eeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe-------cC
Confidence 8877889999999875421 1111111111222 46999999999999998 999999998654322111 23
Q ss_pred cceEEECC---CCCEEEEEcCCCcEEEEECCC
Q 021669 231 TLEASFSP---EGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 231 ~~~~~~sp---~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
+..++|+| +++.+++++.|+.++++-...
T Consensus 302 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 302 ESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred ceeEecCccccccceeEEEecCCceEEEEecC
Confidence 34567888 899999999999999886543
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=3.9e-26 Score=211.64 Aligned_cols=263 Identities=16% Similarity=0.182 Sum_probs=202.2
Q ss_pred EeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEc--cCCceEEEee
Q 021669 18 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL--HDNKYLRYFK 95 (309)
Q Consensus 18 ~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~--~~~~~~~~~~ 95 (309)
.|+|++.++++++.|++|++||..+++++.++..+.. +..++|+|+++++++++. |++|++||+ .+++.+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEEEEEe
Confidence 4889999999999999999999999999999985433 788999999999998874 689999999 8888888887
Q ss_pred ecccCEEEEEecC----CCCeEEEec-CCCcEEEeeCCCceeeeeeeecC-------------ceeEEECCCCc-EEEE-
Q 021669 96 GHHDRVVSLSLCS----SKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQG-------------RPAAAYDDQGL-VFAV- 155 (309)
Q Consensus 96 ~h~~~v~~v~~~~----~~~~l~s~s-~Dg~v~~Wd~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~- 155 (309)
+...+..++|+| |++++++++ .|++|.+||..+.++...+.... .....+++++. ++..
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 445679999999 999998887 58999999999888877665421 12345555443 3333
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEE-EeCCCcEEEEECCCCeEeEEeeecCC-CCCccce
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFRGTLLSTYNVKPV-SRNSTLE 233 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~-~~~dg~v~i~d~~~~~~~~~~~~~~~-~~~~~~~ 233 (309)
..++.|.+||....+. ..+..+. .......+.|+|+|+++++ +..+++|.+||..+++++..+..... |......
T Consensus 299 ~~~g~i~vvd~~~~~~--l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 299 KETGKVLLVNYKDIDN--LTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp TTTTEEEEEECTTSSS--CEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE
T ss_pred CCCCeEEEEEecCCCc--ceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc
Confidence 3468999999876432 1211221 1234567899999997665 45689999999999998887764221 2222222
Q ss_pred EEECCC-CCEEEEEc-CCCcEEEEECCC-------CceEEEeecCCCCCcEEEECCCeeEEEEcc
Q 021669 234 ASFSPE-GMFVISGS-GDGSVYAWSVRS-------GKEVASWMSFDTEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 234 ~~~sp~-g~~l~s~s-~Dg~i~vwd~~~-------~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~ 289 (309)
+ ++|+ |+.++|++ .|++|.+||+.+ ++.+.++..|...+..++|||+++.|.+++
T Consensus 376 ~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 376 F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred c-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 2 5787 66677775 689999999998 888999999998889999999999998876
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=6.4e-27 Score=210.22 Aligned_cols=265 Identities=12% Similarity=0.114 Sum_probs=201.9
Q ss_pred eEecCCCcceEEEEeCC--------------CCCEEEEeeCC------CcEEEEEcCCCceeeeeeccccceeEEEEecC
Q 021669 5 MSFRDYNGRISSMDFHK--------------SSSYLVTASDD------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 64 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~--------------~~~~l~t~s~D------~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~ 64 (309)
+++.+|...+..+++++ .+.+++.++.+ ++|++||++ +.+.+.+..|...+..++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCC
Confidence 55778888888777764 26677777664 799999997 5667788888888999999999
Q ss_pred CCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEE-EecCCCc--EEEeeCCCceeeeeeeecC-
Q 021669 65 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRT--VLLWDQRAEKCQGLLRVQG- 140 (309)
Q Consensus 65 ~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~Dg~--v~~Wd~~~~~~~~~~~~~~- 140 (309)
++.+++++..+.+..|++||+.+++.. .+..|...+.+++|+||++.|+ +++.|+. |.+||+++++.........
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~ 268 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN 268 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSC
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCc
Confidence 999998875433469999999998765 5778889999999999999877 7777665 9999998876643322222
Q ss_pred ceeEEECCCCcEEEEEEC--C--EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC---CcEEEEECC
Q 021669 141 RPAAAYDDQGLVFAVAFG--G--YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME---GHIHVLDSF 213 (309)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~--~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d---g~v~i~d~~ 213 (309)
.....+++++..++.+.+ + .|.+||+...+. ..+..+...+..++|||||++|++++.+ ..|++||+.
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-----QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-----EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-----EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 334677888876655543 3 688888765331 1222333456789999999999988764 589999998
Q ss_pred CCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCC---cEEEEECCCCceEEEeecCCCCCcEEEECCCe
Q 021669 214 RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG---SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS 282 (309)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg---~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~ 282 (309)
+++... +.. + ..+..++|+|||++|++++.|+ .|++||+. ++....+..|++.|.+++|+|-.
T Consensus 344 ~~~~~~-l~~---~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 344 TGGVQV-LSS---T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp TCCEEE-CCC---S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred CCCEEE-ecC---C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 887642 221 2 2677899999999999998887 79999996 55677888999999999999964
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=1.3e-25 Score=208.24 Aligned_cols=288 Identities=11% Similarity=0.078 Sum_probs=210.7
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEc--CCCceeeeeeccccceeEEEEec----CCCEEEEEcCCC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDV--TAATCLKTINSKKYGVDLVCFTS----HPTTVIYSSKNG 75 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~s~~g 75 (309)
+++.++..+.. +..++|+|||++|++++.|++|++||+ .+++++.++..+. .+..++|+| +++++++++.
T Consensus 170 ~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~-~p~~va~sp~~~~dg~~l~v~~~-- 245 (543)
T 1nir_A 170 KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI-EARSVESSKFKGYEDRYTIAGAY-- 245 (543)
T ss_dssp CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEE--
T ss_pred eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC-CcceEEeCCCcCCCCCEEEEEEc--
Confidence 45666763333 889999999999999999999999999 8899988888544 468899999 9999887752
Q ss_pred CCceeEEEEccCCceEEEeee----------ccc-CEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeee--eeeecC-
Q 021669 76 WDESLRLLSLHDNKYLRYFKG----------HHD-RVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQG--LLRVQG- 140 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~----------h~~-~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~--~~~~~~- 140 (309)
++++|.+||..+++.++.+.. |.+ .+.++.++|+++ ++++...+++|.+||+.+.+... .+....
T Consensus 246 ~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~ 325 (543)
T 1nir_A 246 WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPF 325 (543)
T ss_dssp ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSS
T ss_pred cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcC
Confidence 378999999999998888764 333 789999999765 56777889999999998765433 222111
Q ss_pred ceeEEECCCCcEEEEE--ECCEEEEEECCCCCcCCceEEEeCC--CCCCCeEEEEccC-CCEEEEEe-CCCcEEEEECCC
Q 021669 141 RPAAAYDDQGLVFAVA--FGGYIRMFDARKYEKGPFDIFSVGG--DISDANVVKFSND-GRLMLLTT-MEGHIHVLDSFR 214 (309)
Q Consensus 141 ~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~v~~s~d-g~~l~~~~-~dg~v~i~d~~~ 214 (309)
.....+++++.++.++ .+++|.+||+.+.+. ........ |......+ ++|+ |..++++. .|++|.+||..+
T Consensus 326 ~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l--~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 326 LHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp CCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ccCceECCCCCEEEEEecCCCeEEEEECCCCeE--EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 2235778888755443 368999999876431 11222211 22222222 4777 67777775 689999999988
Q ss_pred -------CeEeEEeeecCCCCCccceEEECCCCCEEEEEc-------CCCcEEEEECCCCceE-EEe--------ecCCC
Q 021669 215 -------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-------GDGSVYAWSVRSGKEV-ASW--------MSFDT 271 (309)
Q Consensus 215 -------~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s-------~Dg~i~vwd~~~~~~~-~~~--------~~~~~ 271 (309)
.+++.++.. +...+..++|+|+|++|++++ .+++|.|||+.+++.+ ..+ ..+..
T Consensus 403 ~~~~~~~~~~v~~l~~---~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~ 479 (543)
T 1nir_A 403 KNHPQYAWKKVAELQG---QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAK 479 (543)
T ss_dssp TTCTTTBTSEEEEEEC---SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCC
T ss_pred CCCchhcCeEEEEEEc---CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCC
Confidence 788887764 334566799999999999997 2789999999998876 443 34567
Q ss_pred CCcEEEECCCeeEEEEc-----c--ceEEEeeecC
Q 021669 272 EPPVIKWTPGSLMFVTG-----S--SELSFWIPDL 299 (309)
Q Consensus 272 ~v~~l~~~p~~~~l~s~-----~--~d~~~~~~~~ 299 (309)
.+..++|+|+|+.+..+ + +.+.+|...-
T Consensus 480 ~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 480 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp EEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred ceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 78899999999877643 1 2366766543
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=1.9e-25 Score=193.74 Aligned_cols=280 Identities=12% Similarity=0.092 Sum_probs=197.4
Q ss_pred EeCCCCCE-EEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce-EEEee
Q 021669 18 DFHKSSSY-LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFK 95 (309)
Q Consensus 18 ~~s~~~~~-l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~-~~~~~ 95 (309)
.|.+++++ +++++.|++|++||..+++.+..+..+...+ .++|+|+++.+++++.. ++.|.+||+++++. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF--CQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST--TCEEEEEECSSSSCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC--CCeEEEEECCCCceeEEecc
Confidence 45665554 7899999999999999999988877665556 89999999987776532 67999999999887 77777
Q ss_pred ecccCEEEEEecCCCCeEEEecCCC---cEEEeeCCCceeeeeeeecCc-eeEEECCCCc-EEEEEE-CCE-EEEEECCC
Q 021669 96 GHHDRVVSLSLCSSKDCFISGSLDR---TVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGL-VFAVAF-GGY-IRMFDARK 168 (309)
Q Consensus 96 ~h~~~v~~v~~~~~~~~l~s~s~Dg---~v~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~-~~~-i~~~d~~~ 168 (309)
.+..+..+++|+|++++++++..++ .|.+||+++++....+..... ....+++++. ++++.. ++. +.+|++..
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 7777766699999999988655553 899999998887766654433 3467777775 555544 477 99999864
Q ss_pred CCcC-CceEEEeCCCCCCCeEEEEccCCCEE-EEEeCCCcEEEEECCCCeE---eEEeeecCCCCCccceEEECCCCCEE
Q 021669 169 YEKG-PFDIFSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTL---LSTYNVKPVSRNSTLEASFSPEGMFV 243 (309)
Q Consensus 169 ~~~~-~~~~~~~~~~~~~~~~v~~s~dg~~l-~~~~~dg~v~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~sp~g~~l 243 (309)
.... ....... ........++|+|||+++ ++...++.|++||+.+++. +..+.. ...+..++|+|||+++
T Consensus 161 ~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~----~~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 161 DGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT----NNLPGTIVVSRDGSTV 235 (331)
T ss_dssp TCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----SSCCCCEEECTTSSEE
T ss_pred CCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC----CCCCceEEECCCCCEE
Confidence 2110 0001111 122346889999999855 4555789999999998887 555542 2445679999999977
Q ss_pred EEEc-CCCcEEEEECCCCce--EEEeecC----CCC---CcEEEECCCeeEEEEccc-e--EEEeeecCCCcccc
Q 021669 244 ISGS-GDGSVYAWSVRSGKE--VASWMSF----DTE---PPVIKWTPGSLMFVTGSS-E--LSFWIPDLSKLGAY 305 (309)
Q Consensus 244 ~s~s-~Dg~i~vwd~~~~~~--~~~~~~~----~~~---v~~l~~~p~~~~l~s~~~-d--~~~~~~~~~~~~~~ 305 (309)
+.+. .++.|.+||+.+++. +..+..+ ... ...++|+||++.|..++. + +.+|..+...++.+
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 6664 578999999998876 4444322 222 245899999987654443 3 66776655444443
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1.3e-25 Score=215.54 Aligned_cols=279 Identities=10% Similarity=0.059 Sum_probs=206.6
Q ss_pred CcceEEEEeCCCCCEEEEeeC-CC-----cEEEEEcCCCceeeeeecccc------------------------ceeEEE
Q 021669 11 NGRISSMDFHKSSSYLVTASD-DE-----SIRLYDVTAATCLKTINSKKY------------------------GVDLVC 60 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~-D~-----~v~iWd~~~~~~~~~~~~~~~------------------------~v~~~~ 60 (309)
...|.+++|+|||++|++++. |+ +|++||+.+++..+.+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 999999999988777765432 378899
Q ss_pred EecCCCEEEEEcCCCCCceeEEEEccCCc--eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee
Q 021669 61 FTSHPTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV 138 (309)
Q Consensus 61 ~~~~~~~~~~~s~~g~d~~i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~ 138 (309)
|+|+++.+++++ +++|++||+.+++ .+..+..|...+..+.|+|||++|+.++ ++.|.+||+.+++.......
T Consensus 116 ~SpDg~~l~~~~----~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 116 WSPDAQRLLFPL----GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp ECTTSSEEEEEE----TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred ECCCCCEEEEEe----CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 999999999886 3789999999873 4556778888999999999999999887 56999999988765543322
Q ss_pred cC------------------ceeEEECCCCcEEEE-EECC---------------------------------EEEEEEC
Q 021669 139 QG------------------RPAAAYDDQGLVFAV-AFGG---------------------------------YIRMFDA 166 (309)
Q Consensus 139 ~~------------------~~~~~~~~~~~~~~~-~~~~---------------------------------~i~~~d~ 166 (309)
.. .....+++++..++. ..++ .|.+||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 21 134677888764444 4443 7888887
Q ss_pred CC-CCcCCceEEEeC-CCCCCCeEEEEccCCCEEEEEeC-----CCcEEEEECCCCeEeEEeeecCC-CCCccceEEECC
Q 021669 167 RK-YEKGPFDIFSVG-GDISDANVVKFSNDGRLMLLTTM-----EGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEASFSP 238 (309)
Q Consensus 167 ~~-~~~~~~~~~~~~-~~~~~~~~v~~s~dg~~l~~~~~-----dg~v~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~sp 238 (309)
.. .+. ...... .+...+..++| |||+.|+..+. +..|++||..+++....+..+.. ....+..++|+|
T Consensus 271 ~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 271 AEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp STTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred CCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 65 331 111111 23345778999 99999987764 56899999999887665543211 001345789999
Q ss_pred CCCEEEEEcCCCcEEEEECC-CCceEEEeecCCCCCcEE-EECCCeeEEE-Eccc----eEEEeeecC
Q 021669 239 EGMFVISGSGDGSVYAWSVR-SGKEVASWMSFDTEPPVI-KWTPGSLMFV-TGSS----ELSFWIPDL 299 (309)
Q Consensus 239 ~g~~l~s~s~Dg~i~vwd~~-~~~~~~~~~~~~~~v~~l-~~~p~~~~l~-s~~~----d~~~~~~~~ 299 (309)
||+++++++.||.++||.+. +++ ...+..|...+..+ +|+|+++.++ +++. ..++|..++
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 99999999999988888775 344 67777777778777 5999997654 4443 367887764
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=5.5e-24 Score=185.78 Aligned_cols=268 Identities=12% Similarity=0.121 Sum_probs=199.4
Q ss_pred CCcceEEEEeCCCCCEEEEeeC-------CCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 10 YNGRISSMDFHKSSSYLVTASD-------DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~-------D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
....+..++|+|+++++++++. +++|.+||..+++.++.+.... .+..++++++++.++++.. .++.|.+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~--~~~~v~~ 115 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNT--VNSAVTA 115 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEET--TTTEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEec--CCCEEEE
Confidence 3456789999999998887774 5689999999999888877543 3677899999997776653 3679999
Q ss_pred EEccCCceEEEeeecccC---------EEEEEecCCCCeEEEec--CCCcEEEeeCCCceeeeeeeecC--ceeEEECCC
Q 021669 83 LSLHDNKYLRYFKGHHDR---------VVSLSLCSSKDCFISGS--LDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ 149 (309)
Q Consensus 83 ~d~~~~~~~~~~~~h~~~---------v~~v~~~~~~~~l~s~s--~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~ 149 (309)
||.++++.+..+..+... +.++.|+|++++++.++ .++.|.+||+++++....+.... .....++++
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 999999988887765432 78999999999776665 58899999999888776665222 234556666
Q ss_pred Cc-EEEEEECCEEEEEECCCCCcCCceEEEeC--CCCCCCeEEEEccCCCEEEEEe-CCCcEEEEECCCCeEeEEeeecC
Q 021669 150 GL-VFAVAFGGYIRMFDARKYEKGPFDIFSVG--GDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKP 225 (309)
Q Consensus 150 ~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~v~~s~dg~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~ 225 (309)
+. ++.+..++.|.+||+...+. ....... ++......++++|+|+.+..+. .++.|.+||..+++.+..+....
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKI--LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEE--EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEEcCCCeEEEEECCCCeE--EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 65 44444578999999875432 1122221 1233466799999999766655 45999999999998887765421
Q ss_pred CCCCccceEEECCCCCEEEEE-cCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEc
Q 021669 226 VSRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 226 ~~~~~~~~~~~sp~g~~l~s~-s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~ 288 (309)
...++|+|+|++++.+ ..++.|.+||+.+++.+..+... ..+..++|+|+++.+..+
T Consensus 274 -----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 274 -----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVS 331 (353)
T ss_dssp -----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEE
T ss_pred -----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEE
Confidence 2468999999966555 57999999999999888777543 467899999999854443
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=9.5e-25 Score=185.11 Aligned_cols=254 Identities=11% Similarity=0.049 Sum_probs=184.7
Q ss_pred EEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC-CceEEEeeecc-cCEEEE
Q 021669 27 VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKGHH-DRVVSL 104 (309)
Q Consensus 27 ~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~-~~~~~~~~~h~-~~v~~v 104 (309)
.+++.|++|++||+.+++... +..|...+..++|+|+++.+++++ ++.|++||+.+ ++......+|. ..+.++
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS----EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE----TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred CCCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc----CCeEEEEeCCCCCCceEeccccccccccce
Confidence 356789999999999887664 445677899999999999988875 67999999999 88777776664 678999
Q ss_pred EecCCCCeEEEec--CCCcEEEeeC--CCceeeeeeeecCceeEEECCCCcEEE--EEECCEEEEEECCCCCcCCceEEE
Q 021669 105 SLCSSKDCFISGS--LDRTVLLWDQ--RAEKCQGLLRVQGRPAAAYDDQGLVFA--VAFGGYIRMFDARKYEKGPFDIFS 178 (309)
Q Consensus 105 ~~~~~~~~l~s~s--~Dg~v~~Wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~ 178 (309)
.|+|++++|++++ .++..++|.+ .++...............+++++..++ ...++.+++|++..... . ...
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~-~--~~~ 167 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG-V--ETR 167 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-C--EEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC-c--ceE
Confidence 9999999999998 4455666654 444322221122233456777776443 45689999998643221 1 233
Q ss_pred eCCCCCCCeEEEEccCCCEEEEEe-CCCcEEEEECC-CCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCC-------
Q 021669 179 VGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD------- 249 (309)
Q Consensus 179 ~~~~~~~~~~v~~s~dg~~l~~~~-~dg~v~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D------- 249 (309)
+..+...+..++++|+|+.++.++ .++.+++|+.. .+.....+. .+...+..++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT---DSAYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC---CCSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe---cCCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 344455788999999999888766 58999999875 344444332 233456778999999999999876
Q ss_pred ----CcEEEEECCCCce--EEEeecCCCCCcEEEECCCeeEEEEccce
Q 021669 250 ----GSVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTGSSE 291 (309)
Q Consensus 250 ----g~i~vwd~~~~~~--~~~~~~~~~~v~~l~~~p~~~~l~s~~~d 291 (309)
+.|++||+.+++. +..+..|...+..++|+|+++.|++++.+
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 5699999988765 44455788899999999999988887764
No 135
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=1.2e-23 Score=209.34 Aligned_cols=278 Identities=13% Similarity=0.132 Sum_probs=197.1
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCC------CcEEEEEcCCCceeeeeeccccce-------eEEEEecCCCEEEE
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDD------ESIRLYDVTAATCLKTINSKKYGV-------DLVCFTSHPTTVIY 70 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D------~~v~iWd~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~~~ 70 (309)
.+.+.+|.+.|.+++|||||++||.++.+ ..|.+||+.+++ .+.+..|...+ ..++|+|+++ +++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGN-LII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCC-EEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCE-EEE
Confidence 35678899999999999999999988754 379999998876 56677777667 8899999998 444
Q ss_pred EcCCC----CCceeEEEEccCCceE-------------------------------------------------EEeeec
Q 021669 71 SSKNG----WDESLRLLSLHDNKYL-------------------------------------------------RYFKGH 97 (309)
Q Consensus 71 ~s~~g----~d~~i~~~d~~~~~~~-------------------------------------------------~~~~~h 97 (309)
++... ....+.+||+.+++.. ..+.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 43221 1245777777655422 223567
Q ss_pred ccCEEEEEecCCCCeEEEecCCCcEEEeeCCC-ceeeeeee-ecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCce
Q 021669 98 HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLR-VQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFD 175 (309)
Q Consensus 98 ~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 175 (309)
...+.++.|+++ +.+++++.|+++++|.+.. +.....+. ........+++++..++.+.++.|.+||+.. ..+
T Consensus 203 ~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~---~~l- 277 (1045)
T 1k32_A 203 STHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDT---EKI- 277 (1045)
T ss_dssp SSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTT---CCE-
T ss_pred CCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCc---eEe-
Confidence 788888999887 6777888899999997543 22222221 1222344667778777777899999999732 111
Q ss_pred EEEeCCC-----------CCCCeEEEEc-cCCCEEEEEeCCCcEEEEECCCCeEeE------------------------
Q 021669 176 IFSVGGD-----------ISDANVVKFS-NDGRLMLLTTMEGHIHVLDSFRGTLLS------------------------ 219 (309)
Q Consensus 176 ~~~~~~~-----------~~~~~~v~~s-~dg~~l~~~~~dg~v~i~d~~~~~~~~------------------------ 219 (309)
..+..+ ...+..++|| |||+.+++++ ++.+.+|+...+....
T Consensus 278 -~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s 355 (1045)
T 1k32_A 278 -EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGT 355 (1045)
T ss_dssp -EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEE
T ss_pred -eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEcCCCeEEEEE
Confidence 122221 1247889999 9999888776 6777777765443211
Q ss_pred -------Eeee-------cCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEE
Q 021669 220 -------TYNV-------KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF 285 (309)
Q Consensus 220 -------~~~~-------~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l 285 (309)
.+.. ...+...+..++|||||++|++++.|+.|++||+.+++.......|...+..++|+||+++|
T Consensus 356 ~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 356 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEE
T ss_pred CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeE
Confidence 0000 00122456678999999999999999999999999998777777898899999999999988
Q ss_pred EEccc
Q 021669 286 VTGSS 290 (309)
Q Consensus 286 ~s~~~ 290 (309)
+.++.
T Consensus 436 a~~~~ 440 (1045)
T 1k32_A 436 AYGFP 440 (1045)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87765
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.2e-23 Score=182.09 Aligned_cols=263 Identities=10% Similarity=0.027 Sum_probs=189.7
Q ss_pred CEEEEeeCCCcEEEEEcCCCceeeeeecccc--ceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeee-c---
Q 021669 24 SYLVTASDDESIRLYDVTAATCLKTINSKKY--GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG-H--- 97 (309)
Q Consensus 24 ~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~-h--- 97 (309)
+++++++.|++|++||+.+++.++.+..... .+..++|+|+++.++++.. .++.|.+||+.+++.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN--KSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET--TTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC--CCCeEEEEECCCCCeEeeEEcCCccc
Confidence 4789999999999999999998888764432 3678999999988766543 367999999999988776653 2
Q ss_pred -ccCEEEEEecCCCCeEEEec------------CCCcEEEeeCCCceeeeeeeecC-ceeEEECCCCcEEEEEECCEEEE
Q 021669 98 -HDRVVSLSLCSSKDCFISGS------------LDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFAVAFGGYIRM 163 (309)
Q Consensus 98 -~~~v~~v~~~~~~~~l~s~s------------~Dg~v~~Wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~ 163 (309)
...+..+.|+|+++++++++ .|+.|.+||+.+++....+.... .....+++++..+..+ ++.|.+
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~ 158 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHV 158 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEE
Confidence 23677899999999888886 57999999998887766554432 2345677777655555 789999
Q ss_pred EECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC-C-----------------------cEEEEECCCCeEeE
Q 021669 164 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-G-----------------------HIHVLDSFRGTLLS 219 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d-g-----------------------~v~i~d~~~~~~~~ 219 (309)
||+...+. ........... .+.++|||+.++..+.. + .|.+||..+++..
T Consensus 159 ~d~~~~~~--~~~~~~~~~~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 159 MDPEAGTL--VEDKPIQSWEA---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp EETTTTEE--EEEECSTTTTT---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-
T ss_pred EECCCCcE--eeeeeccccCC---CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-
Confidence 99875431 11111111112 23689998866554433 2 4689999988775
Q ss_pred EeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 220 TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
.....+ +...+..++|+|||++++++ ++.|++||+.+++.+..+.. ...+.+++|+|+++.+++++.+..+.++++
T Consensus 233 ~~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 233 MREVRI-MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEEE-CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred EeecCC-CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 333222 23455679999999999998 79999999999888777654 346889999999987777776644444444
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=5.8e-23 Score=178.27 Aligned_cols=270 Identities=9% Similarity=0.076 Sum_probs=177.1
Q ss_pred CEEEEeeCCCcEEEEEcC-CCc--eeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc--CCc--eEEEeee
Q 021669 24 SYLVTASDDESIRLYDVT-AAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNK--YLRYFKG 96 (309)
Q Consensus 24 ~~l~t~s~D~~v~iWd~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~--~~~--~~~~~~~ 96 (309)
.++++++.|++|++||++ +++ .+..+ .+...+..++|+|+++.+++++.. ++.+++|++. +++ .+..+..
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecC--CCeEEEEEecCCCCceeecccccc
Confidence 345566889999999995 342 23333 344567889999999988877642 4899999997 554 3344444
Q ss_pred cccCEEEEEecCCCCeEEEec-CCCcEEEeeCC---CceeeeeeeecC-ceeEEECCCCcEEE-EE-ECCEEEEEECCC-
Q 021669 97 HHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQR---AEKCQGLLRVQG-RPAAAYDDQGLVFA-VA-FGGYIRMFDARK- 168 (309)
Q Consensus 97 h~~~v~~v~~~~~~~~l~s~s-~Dg~v~~Wd~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~-~~~~i~~~d~~~- 168 (309)
+. .+..++|+|++++|+.++ .++.|.+||+. ..+....+.... .....+++++..+. +. .++.|++||+..
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 43 788999999999776655 58899999984 333333332222 23456777775444 44 579999999875
Q ss_pred CCcCCce--EEEeCCCCCCCeEEEEccCCCEEEEE-eCCCcEEEEECCC--CeE--eEEeeecCCC---CCccceEEECC
Q 021669 169 YEKGPFD--IFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFR--GTL--LSTYNVKPVS---RNSTLEASFSP 238 (309)
Q Consensus 169 ~~~~~~~--~~~~~~~~~~~~~v~~s~dg~~l~~~-~~dg~v~i~d~~~--~~~--~~~~~~~~~~---~~~~~~~~~sp 238 (309)
.+..... .... .....+..++|+|+|+++++. ..++.|++||+.. ++. .......+.. ...+..++|+|
T Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 162 GHLVAQDPAEVTT-VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp SCEEEEEEEEEEC-STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred Cceeeeccccccc-CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 2211110 1111 122356789999999976554 5789999999843 433 2222211111 12345689999
Q ss_pred CCCEEE-EEcCCCcEEEEECC--C--CceEEEeecCCCCCcEEEECCCeeEEEEcc-c--eEEEeeecC
Q 021669 239 EGMFVI-SGSGDGSVYAWSVR--S--GKEVASWMSFDTEPPVIKWTPGSLMFVTGS-S--ELSFWIPDL 299 (309)
Q Consensus 239 ~g~~l~-s~s~Dg~i~vwd~~--~--~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~-~--d~~~~~~~~ 299 (309)
+|++|+ +...|+.|++||+. + .+.+..+..+.. +..++|+|+++.|+.++ . .+.+|..++
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 999887 55689999999998 2 334455555544 88999999998766655 3 377886653
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=6e-23 Score=178.17 Aligned_cols=265 Identities=10% Similarity=0.132 Sum_probs=180.7
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCC-CcEEEEEcC--CCc--eeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDD-ESIRLYDVT--AAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D-~~v~iWd~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
.|...+.+++|+|+|++|++++.+ +.|++|+++ +++ .+..+..+. .+..++|+|+++.++++.. .++.|++|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~--~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSY--NAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEET--TTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEec--CCCeEEEE
Confidence 467789999999999998888886 999999997 554 334444433 6788999999998877653 26789999
Q ss_pred Ecc---CCceEEEeeecccCEEEEEecCCCCeEEEec-CCCcEEEeeCCC-ceeeee----eeec---CceeEEECCCCc
Q 021669 84 SLH---DNKYLRYFKGHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRA-EKCQGL----LRVQ---GRPAAAYDDQGL 151 (309)
Q Consensus 84 d~~---~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~Dg~v~~Wd~~~-~~~~~~----~~~~---~~~~~~~~~~~~ 151 (309)
|+. ..+.+..+..+ ..+.+++|+|+++++++++ .|+.|++||+.+ ++.... +... ......+++++.
T Consensus 112 d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 33444444443 4588999999999777776 899999999987 543321 1111 122356778776
Q ss_pred EEE-EE-ECCEEEEEECCCCCcCCce-EEEeC---CC---CCCCeEEEEccCCCEEEE-EeCCCcEEEEECC--CC--eE
Q 021669 152 VFA-VA-FGGYIRMFDARKYEKGPFD-IFSVG---GD---ISDANVVKFSNDGRLMLL-TTMEGHIHVLDSF--RG--TL 217 (309)
Q Consensus 152 ~~~-~~-~~~~i~~~d~~~~~~~~~~-~~~~~---~~---~~~~~~v~~s~dg~~l~~-~~~dg~v~i~d~~--~~--~~ 217 (309)
.+. +. .++.|.+||+.... +.+. ..... .. ...+..++|+|+|+++++ ...++.|++||+. ++ +.
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPH-GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTT-SCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred EEEEEeCCCCEEEEEEecCCC-CcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 444 44 47899999985421 1111 11111 11 124457999999987764 5579999999987 33 33
Q ss_pred eEEeeecCCCCCccceEEECCCCCEEEEEc-CCCcEEEEEC--CCCc--eEEEeecCCCCCcEEEECCCee
Q 021669 218 LSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVYAWSV--RSGK--EVASWMSFDTEPPVIKWTPGSL 283 (309)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s-~Dg~i~vwd~--~~~~--~~~~~~~~~~~v~~l~~~p~~~ 283 (309)
+..+.. . ..+..++|+|+|++|++++ .|+.|.+|++ .+++ .+..+.. ...+.+++|.|+.+
T Consensus 270 ~~~~~~---~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 270 EGFQPT---E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEC---S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred eeeecC---C-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 333321 2 2367899999999988887 6899999954 4553 3444433 35678889888654
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1.2e-24 Score=208.17 Aligned_cols=280 Identities=10% Similarity=0.056 Sum_probs=195.0
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeecccc---ceeEEEEecCCCEEEEEcCCC------CCceeEE
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKNG------WDESLRL 82 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~s~~g------~d~~i~~ 82 (309)
..+.+++|+|||+++++ +.|++|++||+.++++...+..+.. .+..++|+|+++++++++... .++.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 34778999999998876 7899999999999998888877654 488999999999998886421 2478999
Q ss_pred EEccCCceEEEe---eecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--c----------------
Q 021669 83 LSLHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--R---------------- 141 (309)
Q Consensus 83 ~d~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~---------------- 141 (309)
||+.+++. ..+ .+|...+..++|+|||+.|+.++. +.|++||..+++......... .
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 99998875 333 345556889999999999999885 899999998876544332211 1
Q ss_pred --eeEEECCCCcEEEEEE-CC----------------------------------EEEEEECCCCCcCCceEEEeCCC--
Q 021669 142 --PAAAYDDQGLVFAVAF-GG----------------------------------YIRMFDARKYEKGPFDIFSVGGD-- 182 (309)
Q Consensus 142 --~~~~~~~~~~~~~~~~-~~----------------------------------~i~~~d~~~~~~~~~~~~~~~~~-- 182 (309)
....+++++..++.+. ++ .|++||+...+. ...+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~----~~~l~~~~~ 249 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH----DLEMMPPDD 249 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC----CEECCCCCC
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce----eEEeeCCcc
Confidence 3467888887655443 32 788898865431 1112211
Q ss_pred ----CCCCeEEEEccCCCEEEEEeC----CCcEEEEECCCCeEeEEeeecCCCCCcc----ceEEECCCCCEEEE--EcC
Q 021669 183 ----ISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGTLLSTYNVKPVSRNST----LEASFSPEGMFVIS--GSG 248 (309)
Q Consensus 183 ----~~~~~~v~~s~dg~~l~~~~~----dg~v~i~d~~~~~~~~~~~~~~~~~~~~----~~~~~sp~g~~l~s--~s~ 248 (309)
...+..++|||||+++++... +..|++||+.+++....+... +...+ ..++|||||++|+. ...
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~ 327 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE--SEAWLHRQNEEPVFSKDGRKFFFIRAIP 327 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE--CSSCCCCCCCCCEECTTSCSEEEEEEEC
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec--cCCEEeccCCCceEcCCCCeEEEEEecc
Confidence 235678999999998877653 357999999988866544321 11221 26799999997775 456
Q ss_pred CC------cEEEEE-CCCCce--EEEeecCCCCCcE-EEECCCeeEEEEccc-----eEEEeeecCC
Q 021669 249 DG------SVYAWS-VRSGKE--VASWMSFDTEPPV-IKWTPGSLMFVTGSS-----ELSFWIPDLS 300 (309)
Q Consensus 249 Dg------~i~vwd-~~~~~~--~~~~~~~~~~v~~-l~~~p~~~~l~s~~~-----d~~~~~~~~~ 300 (309)
|+ .|++|| ..+++. ...+..+...+.. ++|+||++.|+..+. ..++|..++.
T Consensus 328 ~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 328 QGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp CSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred cCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 66 577777 344431 4444433334444 699999987765432 3788987654
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=7.7e-24 Score=203.13 Aligned_cols=265 Identities=9% Similarity=0.068 Sum_probs=188.0
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc--eeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 90 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~ 90 (309)
.|.+++|||||++|++++. ++|.+||+.++. ....+..+...+..++|+|+++.+++++ +++|++||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe----CCcEEEEecCCCCE
Confidence 4889999999999999986 999999999873 4555666667789999999999999886 45899999999877
Q ss_pred EEEeeecccC----------------EEEEEecCCCCeEEEecCCC---------------------------------c
Q 021669 91 LRYFKGHHDR----------------VVSLSLCSSKDCFISGSLDR---------------------------------T 121 (309)
Q Consensus 91 ~~~~~~h~~~----------------v~~v~~~~~~~~l~s~s~Dg---------------------------------~ 121 (309)
......+... +.++.|+|||++|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 6655555443 47799999999999998776 8
Q ss_pred EEEeeCCC-ceeeeeeee--c--CceeEEECCCCcEEEEE-E-----CCEEEEEECCCCCcCCceEEEeCC--CCCCCeE
Q 021669 122 VLLWDQRA-EKCQGLLRV--Q--GRPAAAYDDQGLVFAVA-F-----GGYIRMFDARKYEKGPFDIFSVGG--DISDANV 188 (309)
Q Consensus 122 v~~Wd~~~-~~~~~~~~~--~--~~~~~~~~~~~~~~~~~-~-----~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~ 188 (309)
|.+||+.+ ++....... . ......+ +++..++.. . +..|++||+...+.. .+..... ....+..
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR--VLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE--EEEEEECSSCCCCCSC
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE--EEEEcCCCCcCCcCCc
Confidence 88999887 665433211 1 1224566 777655543 2 357999998764321 1222111 1113457
Q ss_pred EEEccCCCEEEEEeCCCcEEEEECC-CCeEeEEeeecCCCCCccceE-EECCCCCEEEE-EcCCC--cEEEEECCC-Cce
Q 021669 189 VKFSNDGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVIS-GSGDG--SVYAWSVRS-GKE 262 (309)
Q Consensus 189 v~~s~dg~~l~~~~~dg~v~i~d~~-~~~~~~~~~~~~~~~~~~~~~-~~sp~g~~l~s-~s~Dg--~i~vwd~~~-~~~ 262 (309)
++|+|||++++++..+|.++||... .+. ...+. .+...+..+ .|+|||++|+. ++.|+ .++||++.. +..
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~---~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~ 417 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT---HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ 417 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC---CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC
T ss_pred eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee---ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC
Confidence 8999999988889999988887654 344 44332 233445565 59999998754 55555 899999864 554
Q ss_pred EEEeecCCCCCcEEEECCCeeEEEEccc
Q 021669 263 VASWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 263 ~~~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
...+.. ...+..++|+||++.++...+
T Consensus 418 ~~~l~~-~~~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 418 PQRLSK-APGMHSASFARNASVYVDSWS 444 (741)
T ss_dssp CEECCC-SCSEEEEEECTTSSEEEEEEE
T ss_pred eeeccc-CCCceEEEECCCCCEEEEEec
Confidence 555554 556789999999988776544
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=4.6e-24 Score=199.48 Aligned_cols=270 Identities=11% Similarity=0.048 Sum_probs=190.6
Q ss_pred CcceEEEEeCCCCCEEEEeeC-CCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC--
Q 021669 11 NGRISSMDFHKSSSYLVTASD-DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-- 87 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~-D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~-- 87 (309)
..+|.+++|+|||++||+++. |++++||++++++..+....+...+..++|+|+ +.++++...+.+...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 457999999999999999987 999999999777665554444457888899988 4444443222355667765533
Q ss_pred -CceEEEeeecccCEEEEEecCCCC--eEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEE-EEC----C
Q 021669 88 -NKYLRYFKGHHDRVVSLSLCSSKD--CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV-AFG----G 159 (309)
Q Consensus 88 -~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~ 159 (309)
++.. .+..+. .+...+|+||++ .+++++.|+. .+||++++++........ ....+++++..++. +.+ .
T Consensus 100 ~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~-~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRV-ALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCE-EEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCc-eEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 332222 234567888875 4555555554 599998887655544333 55667788876664 444 6
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCC--cEEEEECCCCeEeEEeeecCCCCCccceEE--
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEAS-- 235 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (309)
.|++||+...+. ..+..+...+..++|||||+.|+++..++ +|++||+.+++.. ... .+...+..++
T Consensus 176 ~i~~~d~~~g~~-----~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~---~~~~~~~~~~~~ 246 (582)
T 3o4h_A 176 SLFTSNLSSGGL-----RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE---LPSKDFSSYRPT 246 (582)
T ss_dssp EEEEEETTTCCC-----EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC---CSCSHHHHHCCS
T ss_pred EEEEEcCCCCCc-----eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc---CCCcChhhhhhc
Confidence 799999865432 23444555678899999999999888888 8999999888776 332 2334455566
Q ss_pred ------ECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce---EEEeeecCC
Q 021669 236 ------FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE---LSFWIPDLS 300 (309)
Q Consensus 236 ------~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d---~~~~~~~~~ 300 (309)
|+|||+.+++++.|+++++|++ ++... .+.+.+.+++|+ +++++++++++ ..+|.+++.
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 9999999999999999999999 65544 334567889999 99988887765 667777664
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=3.3e-23 Score=197.73 Aligned_cols=266 Identities=11% Similarity=0.084 Sum_probs=186.5
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC----
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD---- 87 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~---- 87 (309)
..|.+++|+|| ++++.+ .|+++++||+.+++..... .+...+..++|+|+++.++++. |+.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~~----~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYVR----NHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEEE----TTEEEEEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEEE----CCeEEEEecCccccc
Confidence 56999999999 665555 4699999999988765543 3445678899999999998864 68999999998
Q ss_pred -CceEEEeeecccC--------------EEEEEecCCCCeEEEec---------------------------------CC
Q 021669 88 -NKYLRYFKGHHDR--------------VVSLSLCSSKDCFISGS---------------------------------LD 119 (309)
Q Consensus 88 -~~~~~~~~~h~~~--------------v~~v~~~~~~~~l~s~s---------------------------------~D 119 (309)
++.......+... +.++.|+|||++|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 8766655544443 47899999999999987 45
Q ss_pred CcEEEeeCCCceeeeeeeec--C--ceeEEECCCCcEEEE-EECC-----EEEEEECCCCCcCCceEEEeCC--CCCCCe
Q 021669 120 RTVLLWDQRAEKCQGLLRVQ--G--RPAAAYDDQGLVFAV-AFGG-----YIRMFDARKYEKGPFDIFSVGG--DISDAN 187 (309)
Q Consensus 120 g~v~~Wd~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~-~~~~-----~i~~~d~~~~~~~~~~~~~~~~--~~~~~~ 187 (309)
..|.+||+++++........ . .....+++++..++. ..++ .|++||+...+.. ..+..... ....+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-RTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-EEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-eEEEEccCCCeECccC
Confidence 78999999887754433211 1 234677888875554 4454 8999998764211 11111111 111235
Q ss_pred EEEEcc--CCCEEEEEeCCCcEEEEECC-CCeEeEEeeecCCCCCccce-EEECCCCCEEEEEcC-CC----cEEEEECC
Q 021669 188 VVKFSN--DGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGSG-DG----SVYAWSVR 258 (309)
Q Consensus 188 ~v~~s~--dg~~l~~~~~dg~v~i~d~~-~~~~~~~~~~~~~~~~~~~~-~~~sp~g~~l~s~s~-Dg----~i~vwd~~ 258 (309)
.++|+| ||++++++..++.+++|+.. ++..+..+.. +...+.. ++|+|||++|+.++. ++ .|+.||+.
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~---~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK---GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC---SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC---CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 679999 99999999999999999875 5555554432 2334544 799999998866544 44 67777877
Q ss_pred CCceEEEeecCCCCCcEEEECCCeeEEEEccc
Q 021669 259 SGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 259 ~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
+++ ...+ .|...+..++|+||++.++..++
T Consensus 391 ~~~-~~~l-~~~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 391 GGK-TKDL-TPESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp CCC-CEES-CCSSSEEEEEECTTSSEEEEEEE
T ss_pred CCC-ceec-cCCCceEEEEECCCCCEEEEEec
Confidence 765 3333 36667889999999988776543
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1e-21 Score=170.13 Aligned_cols=275 Identities=10% Similarity=0.098 Sum_probs=181.6
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeC-CCcEEEEEcCCCce-eeeeeccccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASD-DESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~-D~~v~iWd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
+...+..+...+ .++|+|+|++++.++. |+.|.+||..+++. ...+..+..+...++|+|+++.++++...+.++.|
T Consensus 32 ~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 110 (331)
T 3u4y_A 32 ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNM 110 (331)
T ss_dssp EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEE
T ss_pred eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccE
Confidence 445555566667 9999999997666555 89999999999887 67777666555558999999988843321112299
Q ss_pred EEEEccCCceEEEeeecccCEEEEEecCCCCeEE-EecCCCc-EEEeeCCCceeee-----eeeec-CceeEEECCCCcE
Q 021669 81 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRT-VLLWDQRAEKCQG-----LLRVQ-GRPAAAYDDQGLV 152 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~Dg~-v~~Wd~~~~~~~~-----~~~~~-~~~~~~~~~~~~~ 152 (309)
++||+.+++.+..+..+ ....+++|+|++++++ +...++. +.+|++....... .+... ......+++++..
T Consensus 111 ~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 111 QSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF 189 (331)
T ss_dssp EEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE
T ss_pred EEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE
Confidence 99999999888777644 4568999999998555 4455688 9999986533221 11111 1234677888864
Q ss_pred E-EEE-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEE-eCCCcEEEEECCCCeE--eEEeeecC-C
Q 021669 153 F-AVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTL--LSTYNVKP-V 226 (309)
Q Consensus 153 ~-~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~-~~dg~v~i~d~~~~~~--~~~~~~~~-~ 226 (309)
+ .+. .++.|++||+...+.. ..+..+.. ...+..++|+|||++++.+ ..++.|.+||..+++. +..+.... .
T Consensus 190 l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQNPENI-TLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp EEEEETTTTEEEEEECSSTTSC-EEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCC
T ss_pred EEEEeCCCCeEEEEECCCCccc-ceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccccccc
Confidence 4 343 3689999998754320 01222222 2456778999999976555 4578899999998887 33332110 0
Q ss_pred CCCc---cceEEECCCCCEEEEE-cCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCe
Q 021669 227 SRNS---TLEASFSPEGMFVISG-SGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS 282 (309)
Q Consensus 227 ~~~~---~~~~~~sp~g~~l~s~-s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~ 282 (309)
.... ...++|+|||++|+.+ ..++.|++||+.+. .+.....+...-....++|+.
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~-~~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISANISRELKVFTISGK-VVGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC-EEEECTTCCCBSCEEECCCC-
T ss_pred CCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC-cccceecccccCCeEEECCcc
Confidence 1111 2347999999988665 45669999999764 344444444444445556654
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=1.4e-23 Score=200.25 Aligned_cols=274 Identities=10% Similarity=0.105 Sum_probs=191.0
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEEcCCCcee-eeeeccc-----------------cceeEEEEecCCCEEEEEcCCC
Q 021669 14 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCL-KTINSKK-----------------YGVDLVCFTSHPTTVIYSSKNG 75 (309)
Q Consensus 14 V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~~~~~s~~g 75 (309)
+..+.|+ |+.+++++.|+ | +||+.+++.+ +.+..+. ..+..++|+|+ ..++++.
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~--- 99 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT--- 99 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE---
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE---
Confidence 5567788 66777888888 8 9999999884 4444332 45889999999 7777664
Q ss_pred CCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCC-----ceeeeeeeecCc---------
Q 021669 76 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-----EKCQGLLRVQGR--------- 141 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~-----~~~~~~~~~~~~--------- 141 (309)
++++++||+.+++.. .+..+...+.+++|+|||+.|+.+ .|+.|++||+.+ ++..........
T Consensus 100 -~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 100 -QGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp -TTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred -CCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 579999999888654 445577788999999999999885 689999999987 655433322211
Q ss_pred -------eeEEECCCCcEEEEEE----------------------------------CCEEEEEECCCCCcCCceEEEeC
Q 021669 142 -------PAAAYDDQGLVFAVAF----------------------------------GGYIRMFDARKYEKGPFDIFSVG 180 (309)
Q Consensus 142 -------~~~~~~~~~~~~~~~~----------------------------------~~~i~~~d~~~~~~~~~~~~~~~ 180 (309)
....+++++..++.+. +..|++||+...+.. .+....
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~ 254 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV--YLQTGE 254 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE--ECCCCS
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE--eeccCC
Confidence 3567888887666553 257999998653311 111111
Q ss_pred CCCCCCeEEEEccCCCEEEEEeCCC-----cEEEEECCCC-eEeEEeeec-CCCCCccceEEECC--CCCEEEEEcCCCc
Q 021669 181 GDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRG-TLLSTYNVK-PVSRNSTLEASFSP--EGMFVISGSGDGS 251 (309)
Q Consensus 181 ~~~~~~~~v~~s~dg~~l~~~~~dg-----~v~i~d~~~~-~~~~~~~~~-~~~~~~~~~~~~sp--~g~~l~s~s~Dg~ 251 (309)
.+...+..++|||||+.+++++.++ .|++||..++ ......... ......+..++|+| ||+++++++.|+.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 2334577899999999999988776 8999999988 433222111 11111235679999 9999999999999
Q ss_pred EEEEECC-CCceEEEeecCCCCCcE-EEECCCeeEEEEcc-ce----EEEeeecCC
Q 021669 252 VYAWSVR-SGKEVASWMSFDTEPPV-IKWTPGSLMFVTGS-SE----LSFWIPDLS 300 (309)
Q Consensus 252 i~vwd~~-~~~~~~~~~~~~~~v~~-l~~~p~~~~l~s~~-~d----~~~~~~~~~ 300 (309)
++||++. +++.+..+..+...+.. ++|+|+++.|+.++ .+ .++|.+++.
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 9999886 66677777777777776 89999997665444 33 488888653
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=4.9e-23 Score=178.27 Aligned_cols=245 Identities=11% Similarity=-0.007 Sum_probs=179.4
Q ss_pred ceEEEEeCCCCCEE-EEeeCCCcEEEEEcCCCceeeeeeccc-----cceeEEEEecCCCEEEEEcCC------C---CC
Q 021669 13 RISSMDFHKSSSYL-VTASDDESIRLYDVTAATCLKTINSKK-----YGVDLVCFTSHPTTVIYSSKN------G---WD 77 (309)
Q Consensus 13 ~V~~i~~s~~~~~l-~t~s~D~~v~iWd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~s~~------g---~d 77 (309)
.+..++|+|+|+++ ++++.++.|.+||+.+++.+..+.... ..+..++++|+++.++++... . .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47899999999765 666678999999999998887765422 246778999999988877411 0 26
Q ss_pred ceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC-ceeEEECCCCcEEEEE
Q 021669 78 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFAVA 156 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 156 (309)
+.|.+||+.+++.+..+.. ...+.++.|+|++++|+++ ++.|.+||+++++....+.... .....+.+++..+...
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeee
Confidence 8999999999887777664 4567889999999988887 6899999999887765544322 0111223333211111
Q ss_pred E---------------CC----------EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEE
Q 021669 157 F---------------GG----------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 211 (309)
Q Consensus 157 ~---------------~~----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d 211 (309)
. ++ .|.+||+...+.. ..........+..++++|||++++++ ++.|++||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d 266 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFD 266 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEE
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEE
Confidence 1 11 5789998764321 22233333456789999999998888 79999999
Q ss_pred CCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecC
Q 021669 212 SFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF 269 (309)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~ 269 (309)
+.+++.+..+... ..+..++|+|||++|++++.|+.|++||+.+++.+..+..+
T Consensus 267 ~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 267 LEKNASIKRVPLP----HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TTTTEEEEEEECS----SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCCcCcceecCC----CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9998887766532 34568999999999999999999999999999988887654
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=5.9e-22 Score=173.09 Aligned_cols=266 Identities=12% Similarity=0.138 Sum_probs=175.7
Q ss_pred CCCcEEEEEcC--CCceee-eeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc--eEEEeeecccCEEEEE
Q 021669 31 DDESIRLYDVT--AATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLS 105 (309)
Q Consensus 31 ~D~~v~iWd~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~--~~~~~~~h~~~v~~v~ 105 (309)
.++.+.+|+++ +++... ....+...+..++|+|+++ +++++..+.++.|.+||+.+++ .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 46678888664 455433 2233344567799999998 6665532346899999998776 3445566788899999
Q ss_pred ecCCCCeEEEec-CCCcEEEeeCCC-cee--eeeeeecC-----------ceeEEECCCCcEEEEEE-CCEEEEEECCCC
Q 021669 106 LCSSKDCFISGS-LDRTVLLWDQRA-EKC--QGLLRVQG-----------RPAAAYDDQGLVFAVAF-GGYIRMFDARKY 169 (309)
Q Consensus 106 ~~~~~~~l~s~s-~Dg~v~~Wd~~~-~~~--~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~i~~~d~~~~ 169 (309)
|+||+++|++++ .++++++||+.. +.. ...+.... .....+++++.++++.. ++.|++|++...
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999888877 789999999853 222 22221111 12367778777555554 678999998721
Q ss_pred CcCCceE-EEeCC-CCCCCeEEEEccCCCEEEE-EeCCCcEEEEECCC--CeEeE--EeeecCCC---CCccceEEECCC
Q 021669 170 EKGPFDI-FSVGG-DISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFR--GTLLS--TYNVKPVS---RNSTLEASFSPE 239 (309)
Q Consensus 170 ~~~~~~~-~~~~~-~~~~~~~v~~s~dg~~l~~-~~~dg~v~i~d~~~--~~~~~--~~~~~~~~---~~~~~~~~~sp~ 239 (309)
+.+.. ..... .......++|+|||+++++ ...++.|++|+... ++... .....+.. ...+..++|+||
T Consensus 173 --g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 173 --GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp --SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred --CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 22221 11111 1235677999999995555 56789999999764 55432 22211110 133567999999
Q ss_pred CCEE-EEEcCCCcEEEEECCC---CceEEEeecCCCCCcEEEECCCeeEEEEccce---EEEeeecC
Q 021669 240 GMFV-ISGSGDGSVYAWSVRS---GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE---LSFWIPDL 299 (309)
Q Consensus 240 g~~l-~s~s~Dg~i~vwd~~~---~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d---~~~~~~~~ 299 (309)
|++| ++...++.|.+|++.. .+.+..+..+...+..++|+||+++|+.++.+ +.+|..+.
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 9988 5556789999999973 24556666667778999999999877666543 77775554
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=3.1e-23 Score=198.34 Aligned_cols=275 Identities=8% Similarity=0.033 Sum_probs=186.4
Q ss_pred ceEecCCCc---ceEEEEeCCCCCEEEEeeCC---------CcEEEEEcCCCcee--eeeeccccceeEEEEecCCCEEE
Q 021669 4 GMSFRDYNG---RISSMDFHKSSSYLVTASDD---------ESIRLYDVTAATCL--KTINSKKYGVDLVCFTSHPTTVI 69 (309)
Q Consensus 4 ~~~~~~h~~---~V~~i~~s~~~~~l~t~s~D---------~~v~iWd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~ 69 (309)
...+.+|.. .|.+++|||||++||+++.| +.+.+||+.++++. .....+...+..++|+|+++.++
T Consensus 50 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la 129 (723)
T 1xfd_A 50 TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLI 129 (723)
T ss_dssp EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEE
Confidence 345566665 49999999999999999875 77889999988762 22223344478899999999999
Q ss_pred EEcCCCCCceeEEEEccCCceEEEeeecccCE------------------EEEEecCCCCeEEEecCCC-----------
Q 021669 70 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRV------------------VSLSLCSSKDCFISGSLDR----------- 120 (309)
Q Consensus 70 ~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v------------------~~v~~~~~~~~l~s~s~Dg----------- 120 (309)
+++ +++|++||+.+++.+.....+...+ .++.|+|||+.|++++.|+
T Consensus 130 ~~~----~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~ 205 (723)
T 1xfd_A 130 FIF----ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTY 205 (723)
T ss_dssp EEE----TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCC
T ss_pred EEE----CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeecc
Confidence 887 4689999999988777666554433 7899999999999987653
Q ss_pred -----------------------cEEEeeCCCceeeeeeeec------C--ceeEEECCCCcEEEEEE-----CCEEEEE
Q 021669 121 -----------------------TVLLWDQRAEKCQGLLRVQ------G--RPAAAYDDQGLVFAVAF-----GGYIRMF 164 (309)
Q Consensus 121 -----------------------~v~~Wd~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~-----~~~i~~~ 164 (309)
+|++||+.+++....+... . .....+++++.+++... +..|++|
T Consensus 206 ~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~ 285 (723)
T 1xfd_A 206 TGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLC 285 (723)
T ss_dssp SSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEE
T ss_pred CCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEE
Confidence 7999999887643333321 1 22467788887775442 2479999
Q ss_pred ECCCCCcCCceEEEeCCCCCCC----eEEEEccCCCEEEE--EeCCC------cEEEEE-CCCCeE--eEEeeecCCCCC
Q 021669 165 DARKYEKGPFDIFSVGGDISDA----NVVKFSNDGRLMLL--TTMEG------HIHVLD-SFRGTL--LSTYNVKPVSRN 229 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~----~~v~~s~dg~~l~~--~~~dg------~v~i~d-~~~~~~--~~~~~~~~~~~~ 229 (309)
|+...+. ..+.... +...+ ..++|||||+.|+. ...++ +|.+|| ...+.. ...+. . ...
T Consensus 286 d~~~g~~--~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~-~~~ 359 (723)
T 1xfd_A 286 DATTGVC--TKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--S-GDW 359 (723)
T ss_dssp ETTTCCE--EEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--C-SSS
T ss_pred eCCCCcc--eEEEEec-cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee--c-CCe
Confidence 9865432 1111111 11111 36799999997765 44566 577777 333330 22221 1 112
Q ss_pred ccce-EEECCCCCEEEEEcCC---CcEEEEECCCCc--eEEEeec---CCCCCcEEEECCCeeEEEEc
Q 021669 230 STLE-ASFSPEGMFVISGSGD---GSVYAWSVRSGK--EVASWMS---FDTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 230 ~~~~-~~~sp~g~~l~s~s~D---g~i~vwd~~~~~--~~~~~~~---~~~~v~~l~~~p~~~~l~s~ 288 (309)
.+.. ++|+|||++|+..+.+ +.+++|++.... ....+.. |...+..++|+||++.++..
T Consensus 360 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 360 DVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp CEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred EEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 2333 6899999999766555 789999986432 2333433 56778999999999877654
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=2.7e-23 Score=206.69 Aligned_cols=269 Identities=10% Similarity=0.054 Sum_probs=201.9
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCC-CceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
..+.+|.+.+.++.|+++ .++++++.|++++||.++. +...+.+..+. .+...+|+|+++.++++. ++.+.+|
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~----~~~i~~~ 270 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK----GGSIYIF 270 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE----TTEEEEE
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe----CCEEEEe
Confidence 345789999999999998 6778888999999998753 44555555554 355679999999888874 6799999
Q ss_pred EccCCceEEEeee-----------cccCEEEEEec-CCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCC
Q 021669 84 SLHDNKYLRYFKG-----------HHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ 149 (309)
Q Consensus 84 d~~~~~~~~~~~~-----------h~~~v~~v~~~-~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~ 149 (309)
|++..+ +..+.+ |...+.+++|+ |||+.|++++ ++.+.+|+...+.......... .....++ +
T Consensus 271 d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-d 347 (1045)
T 1k32_A 271 NPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-T 347 (1045)
T ss_dssp CTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-S
T ss_pred cCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-C
Confidence 995443 335544 44578999999 9999999888 8899999988765443222111 1223455 5
Q ss_pred CcEEEEE-ECCEEE-EEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC
Q 021669 150 GLVFAVA-FGGYIR-MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 150 ~~~~~~~-~~~~i~-~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
+..++.. .+..+. +||+.... ...+.++...+..++|||||+.|++++.++.|++||+.+++...... .+
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~-----~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~---~~ 419 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGK-----AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER---SR 419 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCC-----EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CS
T ss_pred CCeEEEEECCCceEEEEECCCCC-----ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc---CC
Confidence 5544444 345677 77875432 12233455678899999999999999999999999999988766543 24
Q ss_pred CCccceEEECCCCCEEEEEcCCC----------cEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce
Q 021669 228 RNSTLEASFSPEGMFVISGSGDG----------SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 291 (309)
Q Consensus 228 ~~~~~~~~~sp~g~~l~s~s~Dg----------~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d 291 (309)
...+..++|||||++|++++.++ .|++||+.+++ +..+..|...+..++|+|||+.|+.++.+
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecc
Confidence 45677899999999999987754 99999999876 66777788788899999999988877753
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.3e-21 Score=170.80 Aligned_cols=248 Identities=13% Similarity=0.164 Sum_probs=165.6
Q ss_pred CCCcceEEEEeCCCCCEEEEeeC---CCcEEEEEcCCCc--eeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 9 DYNGRISSMDFHKSSSYLVTASD---DESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~---D~~v~iWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
.+...+..++|+|||+ |++++. |+.|.+||+.+++ .+..+..+...+..++|+|+++.+++++. .++.+++|
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~--~~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY--HKGTAEVM 113 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET--TTTEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC--CCCEEEEE
Confidence 4556777899999999 554443 6899999997765 34444555566788999999998887753 27899999
Q ss_pred EccC-Cc--eEEEeee---------cccCEEEEEecCCCCeEEEecCCCcEEEeeCC-Cceeeeee--eec---CceeEE
Q 021669 84 SLHD-NK--YLRYFKG---------HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR-AEKCQGLL--RVQ---GRPAAA 145 (309)
Q Consensus 84 d~~~-~~--~~~~~~~---------h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~-~~~~~~~~--~~~---~~~~~~ 145 (309)
++.. ++ .+..+.. +...+.+++|+|+++.+++...++.|++||+. +++..... ... ......
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 33 2222221 12348899999999977777789999999987 44332211 111 122467
Q ss_pred ECCCCcEEEEE--ECCEEEEEECCCCCcCCce-EEEeCCCC------CCCeEEEEccCCCEE-EEEeCCCcEEEEECCC-
Q 021669 146 YDDQGLVFAVA--FGGYIRMFDARKYEKGPFD-IFSVGGDI------SDANVVKFSNDGRLM-LLTTMEGHIHVLDSFR- 214 (309)
Q Consensus 146 ~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~-~~~~~~~~------~~~~~v~~s~dg~~l-~~~~~dg~v~i~d~~~- 214 (309)
+++++.++.+. .++.+.+|++.... +.+. ........ .....++|+|||+++ ++...++.|.+||+..
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQT-GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCC-CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 88888754443 36899999976411 1111 11111111 236779999999977 5666789999999863
Q ss_pred C--eEeEEeeecCCCCCccceEEECCCCCEEEEEcCC-CcEEEE--ECCCCceE
Q 021669 215 G--TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-GSVYAW--SVRSGKEV 263 (309)
Q Consensus 215 ~--~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D-g~i~vw--d~~~~~~~ 263 (309)
+ ..+..+. .+...+..++|+|||++|++++.+ +.|.+| |..+++..
T Consensus 273 g~~~~~~~~~---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 273 GHLTLIQQIS---TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GCEEEEEEEE---CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CcEEEeEEEe---cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 2 3333332 223446789999999999888764 899999 55556543
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=1.1e-21 Score=170.67 Aligned_cols=242 Identities=10% Similarity=0.040 Sum_probs=178.8
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccc-cceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEe
Q 021669 16 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 94 (309)
Q Consensus 16 ~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~ 94 (309)
.+++++++.++++++.|++|++||+.+++.++.+..+. ..+..++++|+++.++++.. .++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEE
Confidence 45788899999999999999999999999888877543 24678899999987766542 3789999999999887776
Q ss_pred eecc------cCEEEEEecCCCCeEEEecCC------------CcEEEeeCCCceeeee---eeecC-ceeEEECCCCcE
Q 021669 95 KGHH------DRVVSLSLCSSKDCFISGSLD------------RTVLLWDQRAEKCQGL---LRVQG-RPAAAYDDQGLV 152 (309)
Q Consensus 95 ~~h~------~~v~~v~~~~~~~~l~s~s~D------------g~v~~Wd~~~~~~~~~---~~~~~-~~~~~~~~~~~~ 152 (309)
..+. ..+..+.|+||++++++++.+ +.|.+||+++++.... ...+. .....+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l 161 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL 161 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCE
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcE
Confidence 5332 337889999999999988865 9999999987543322 22222 234557777775
Q ss_pred EEEEECCEEEEEECCCCCcCCceEEEeCC---------------------------------------------------
Q 021669 153 FAVAFGGYIRMFDARKYEKGPFDIFSVGG--------------------------------------------------- 181 (309)
Q Consensus 153 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------------------------------------------------- 181 (309)
++ .++.|.+||+...+.. ..+....
T Consensus 162 ~~--~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 162 YV--AGPDIYKMDVKTGKYT--VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp EE--ESSSEEEECTTTCCEE--EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EE--ccCcEEEEeCCCCcee--ccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 44 3455999997653210 0000000
Q ss_pred ---------------CCCCCeEEEEcc-CCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEE
Q 021669 182 ---------------DISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 245 (309)
Q Consensus 182 ---------------~~~~~~~v~~s~-dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s 245 (309)
.......++++| ||++++++ ++.|++||+.+++.+..+... ..+..++|+|+|++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD----HTYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS----SCCCEEEECSSSSCEEE
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC----CCccceEECCCCCEEEE
Confidence 001245667889 99998888 889999999999887766532 23567999999999999
Q ss_pred EcCCCcEEEEECCCCceEEEeecC
Q 021669 246 GSGDGSVYAWSVRSGKEVASWMSF 269 (309)
Q Consensus 246 ~s~Dg~i~vwd~~~~~~~~~~~~~ 269 (309)
++.++.|++||+.+++.+..+...
T Consensus 312 ~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 312 GGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp ESBSSEEEEEETTTTEEEEEEECS
T ss_pred ecCCCeEEEEeccccceeeeeecC
Confidence 999999999999999888877543
No 151
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=4.8e-22 Score=176.02 Aligned_cols=288 Identities=11% Similarity=0.086 Sum_probs=194.1
Q ss_pred ceEecCCCcceEE-----EEeCCCCCEEEEeeC-CCc--EEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCC
Q 021669 4 GMSFRDYNGRISS-----MDFHKSSSYLVTASD-DES--IRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG 75 (309)
Q Consensus 4 ~~~~~~h~~~V~~-----i~~s~~~~~l~t~s~-D~~--v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g 75 (309)
..++..|.+.... .+|+|||++|+.++. |+. |.+||+.+++..+...++...+...+|+|+++.+++++.
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~-- 100 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD-- 100 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET--
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC--
Confidence 4566677766666 889999999999987 674 777899999888777766655556789999999998874
Q ss_pred CCceeEEEEccCCceEEEeeecccCEEEEE--ecCCCCeEEE----------------------ecCCCcEEEeeCCCce
Q 021669 76 WDESLRLLSLHDNKYLRYFKGHHDRVVSLS--LCSSKDCFIS----------------------GSLDRTVLLWDQRAEK 131 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~--~~~~~~~l~s----------------------~s~Dg~v~~Wd~~~~~ 131 (309)
+..+++||+.+++....+..+...+.... ++++++.++. .+.+..|.+||+.+++
T Consensus 101 -~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 101 -GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp -TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred -CCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 56899999999988777777766664444 4789988763 3355789999998876
Q ss_pred eeeeeeecC-ceeEEECC-CCcEEEEEEC-------CEEEEEECCCCCcCCceEEEeCCCC--CCCeEEEEccCCCEEEE
Q 021669 132 CQGLLRVQG-RPAAAYDD-QGLVFAVAFG-------GYIRMFDARKYEKGPFDIFSVGGDI--SDANVVKFSNDGRLMLL 200 (309)
Q Consensus 132 ~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~v~~s~dg~~l~~ 200 (309)
......... .....++| ++..++.... ..|.++|...... ..+.... ..+...+|||||+.|+.
T Consensus 180 ~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 180 STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-----RKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-----EESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-----EEeeeCCCCcccccceECCCCCEEEE
Confidence 554433222 23456677 7765554432 2677777643221 1122222 13556789999997766
Q ss_pred EeC-CC----cEEEEECCCCeEeEEeeecCC-CC-CccceEEECCCCCEEEEE---------cCCCcEEEEECCCCceEE
Q 021669 201 TTM-EG----HIHVLDSFRGTLLSTYNVKPV-SR-NSTLEASFSPEGMFVISG---------SGDGSVYAWSVRSGKEVA 264 (309)
Q Consensus 201 ~~~-dg----~v~i~d~~~~~~~~~~~~~~~-~~-~~~~~~~~sp~g~~l~s~---------s~Dg~i~vwd~~~~~~~~ 264 (309)
.+. ++ .|++||+.+++.......... +. ......+|+|||++|+.. ..+..|++||+.+++. .
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 333 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-H 333 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-E
T ss_pred EecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-E
Confidence 443 22 399999988875332221110 00 001234799999988854 4566899999988654 4
Q ss_pred EeecCCC-----------CCcEEEECCCeeEEEEccc---eEEEeeecCC
Q 021669 265 SWMSFDT-----------EPPVIKWTPGSLMFVTGSS---ELSFWIPDLS 300 (309)
Q Consensus 265 ~~~~~~~-----------~v~~l~~~p~~~~l~s~~~---d~~~~~~~~~ 300 (309)
.+..+.. .+..++|+|||+.|+..+. ..++|..++.
T Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 334 RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 5556665 5788999999987776553 3778877764
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=9.1e-22 Score=166.63 Aligned_cols=238 Identities=10% Similarity=0.053 Sum_probs=167.8
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCC-Cceeeeeeccc-cceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~-~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
..+..|.+.|.+++|+|+|++|++++ |+.|++||+.+ ++....+..+. ..+..++|+|+++.+++++.. .++..++
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~l 112 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKV-EFGKSAI 112 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECT-TTSSCEE
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeC-CCCcceE
Confidence 35567899999999999999999987 88999999998 88777666653 567889999999998887632 2345666
Q ss_pred EEc--cCCceEEEeeecccCEEEEEecCCCCeEE-EecCCCcEEEeeCC--Cceeeeeeeec-CceeEEECCCCcEEEEE
Q 021669 83 LSL--HDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQR--AEKCQGLLRVQ-GRPAAAYDDQGLVFAVA 156 (309)
Q Consensus 83 ~d~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~Dg~v~~Wd~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (309)
|.+ .+++ ...+..+. .+..+.|+|+++.|+ +++.|+.+++|++. ++......... ......+++++..++.+
T Consensus 113 ~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 190 (297)
T 2ojh_A 113 YLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFN 190 (297)
T ss_dssp EEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEE
Confidence 654 4444 34444343 489999999999877 78899999999853 33332222211 12345677777655543
Q ss_pred --ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC-----------CcEEEEECCCCeEeEEeee
Q 021669 157 --FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----------GHIHVLDSFRGTLLSTYNV 223 (309)
Q Consensus 157 --~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d-----------g~v~i~d~~~~~~~~~~~~ 223 (309)
.++.+++|++..... . ...+..+...+..++|+|+|++|++++.+ +.|++||+.+++.......
T Consensus 191 ~~~~~~~~i~~~~~~~~-~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 267 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDGS-S--VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL 267 (297)
T ss_dssp ECTTSSCEEEEEETTSS-C--EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE
T ss_pred ecCCCCccEEEECCCCC-C--cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc
Confidence 368899998753211 1 23333444567788999999999888766 5699999988765433321
Q ss_pred cCCCCCccceEEECCCCCEEEEEcCCC
Q 021669 224 KPVSRNSTLEASFSPEGMFVISGSGDG 250 (309)
Q Consensus 224 ~~~~~~~~~~~~~sp~g~~l~s~s~Dg 250 (309)
. .+...+..++|+|+|++|++++.|.
T Consensus 268 ~-~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 268 F-GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp E-ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred C-CCCcccccceECCCCCEEEEEEecc
Confidence 1 2345677789999999999987764
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=7.4e-20 Score=160.69 Aligned_cols=276 Identities=13% Similarity=0.192 Sum_probs=178.4
Q ss_pred CCCCCEEEEee----CCCcEEEEEc--CCCceeeeeeccccceeEEEEecCCCEEEEEcCCC-CCceeEEEEccC--Cce
Q 021669 20 HKSSSYLVTAS----DDESIRLYDV--TAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG-WDESLRLLSLHD--NKY 90 (309)
Q Consensus 20 s~~~~~l~t~s----~D~~v~iWd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g-~d~~i~~~d~~~--~~~ 90 (309)
.+...++..|+ .++.|.+|++ .+++.......+...+..++|+|+++.+++++..+ .++.+.+|++.. ++.
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 34445666664 4678999976 45554332222455577899999999888876421 247999999876 432
Q ss_pred --EEEeeecccCEEEEEecCCCCeEEEec-CCCcEEEeeCCCceeeeee----eecC------------ceeEEECCCCc
Q 021669 91 --LRYFKGHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRAEKCQGLL----RVQG------------RPAAAYDDQGL 151 (309)
Q Consensus 91 --~~~~~~h~~~v~~v~~~~~~~~l~s~s-~Dg~v~~Wd~~~~~~~~~~----~~~~------------~~~~~~~~~~~ 151 (309)
+.....+......+++ ++++|++++ .++++.+|++........+ ...+ ...+.+++++.
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 3333345566777777 777766665 6889999998754322211 1100 12367788887
Q ss_pred EEEE-EE-CCEEEEEECCCCCcC---C-c------eEEEeCCCCCCCeEEEEccCCCEEEEEe-CCCcEEEEECCCCeEe
Q 021669 152 VFAV-AF-GGYIRMFDARKYEKG---P-F------DIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLL 218 (309)
Q Consensus 152 ~~~~-~~-~~~i~~~d~~~~~~~---~-~------~~~~~~~~~~~~~~v~~s~dg~~l~~~~-~dg~v~i~d~~~~~~~ 218 (309)
.+.+ .. ++.|++|++...... . + ..... ........++|+|||+++++.. .++.|.+||+.++.+.
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 4444 43 689999987643210 1 1 11122 2234567899999999877666 6899999999877653
Q ss_pred E--EeeecCCCCCccceEEECCCCCEEEEEcCC--CcEEEEECC--CCc--eEEEeecCCCCCcEEEECCCeeEEEEccc
Q 021669 219 S--TYNVKPVSRNSTLEASFSPEGMFVISGSGD--GSVYAWSVR--SGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 219 ~--~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D--g~i~vwd~~--~~~--~~~~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
. .....+.+......++|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+|++++|+.++.
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 2 222222222345689999999999776654 899999995 444 3444444 557889999999997777653
Q ss_pred ---eEEEeeecC
Q 021669 291 ---ELSFWIPDL 299 (309)
Q Consensus 291 ---d~~~~~~~~ 299 (309)
.+.+|.+++
T Consensus 326 ~~~~v~v~~~d~ 337 (361)
T 3scy_A 326 DTNVIQIFERDQ 337 (361)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCCEEEEEEEC
Confidence 378877764
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=5.3e-22 Score=179.09 Aligned_cols=206 Identities=9% Similarity=0.104 Sum_probs=150.6
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCce----------eee-----eeccccceeEEEEecCCCEEEEEc-C
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC----------LKT-----INSKKYGVDLVCFTSHPTTVIYSS-K 73 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~----------~~~-----~~~~~~~v~~~~~~~~~~~~~~~s-~ 73 (309)
+...++.+++++++.++++++.|+ ++||+...... +.. ...+...+..++|+++++.++++. .
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 344688999999999999999998 99987642110 110 012334689999999999888421 1
Q ss_pred CCCCceeEEEEccCC--------c---eEEEeeecccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCceeeeeeeecCc
Q 021669 74 NGWDESLRLLSLHDN--------K---YLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR 141 (309)
Q Consensus 74 ~g~d~~i~~~d~~~~--------~---~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~ 141 (309)
++.|++|++||+.++ + .+..+.+|.+.|.+++|+|+ ++.|++++.||+|++||++++......
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~----- 188 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT----- 188 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-----
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-----
Confidence 345999999998764 1 24667789999999999998 789999999999999998765321100
Q ss_pred eeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEe
Q 021669 142 PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 221 (309)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~ 221 (309)
.++...+.+++|+|+|++|++++.||+|++||.+ ++....+
T Consensus 189 --------------------------------------~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 189 --------------------------------------LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp --------------------------------------ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred --------------------------------------cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 0122357889999999999999999999999998 5555554
Q ss_pred eecCC----CCCccceEEECCCCCEEEEE-cCCC------cEEEEECCCC
Q 021669 222 NVKPV----SRNSTLEASFSPEGMFVISG-SGDG------SVYAWSVRSG 260 (309)
Q Consensus 222 ~~~~~----~~~~~~~~~~sp~g~~l~s~-s~Dg------~i~vwd~~~~ 260 (309)
..+.. +...+.+++|++++.++++. +.|| .+++|++.+.
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 43221 12367889999999888654 3443 3899999865
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=4.3e-20 Score=162.18 Aligned_cols=264 Identities=9% Similarity=0.108 Sum_probs=167.6
Q ss_pred CCcceEEEEeCCCCCEEEEeeCC----CcEEEEEcCC--Cce--eeeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 10 YNGRISSMDFHKSSSYLVTASDD----ESIRLYDVTA--ATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D----~~v~iWd~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
|...+..++|+|||++|++++.| +.|.+|+++. ++. +.....+......+++ +++.++++.. .++.+.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~--~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY--SGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET--TTTEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC--CCCEEE
Confidence 56677789999999999999886 7999998864 433 2333333334455555 7777776653 378999
Q ss_pred EEEccCCceEEEe------ee--------cccCEEEEEecCCCCeEE-EecCCCcEEEeeCCCcee------e------e
Q 021669 82 LLSLHDNKYLRYF------KG--------HHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQRAEKC------Q------G 134 (309)
Q Consensus 82 ~~d~~~~~~~~~~------~~--------h~~~v~~v~~~~~~~~l~-s~s~Dg~v~~Wd~~~~~~------~------~ 134 (309)
+|++.....+..+ .+ +...+.+++|+|++++++ +...++.+++|++..... . .
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~ 203 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE 203 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc
Confidence 9999754332211 11 223468899999999655 445689999998765431 1 1
Q ss_pred eeeec---CceeEEECCCCcEEEEEE--CCEEEEEECCCCCcCCceEE-EeCCCCCCCeEEEEccCCCEEEEEeC--CCc
Q 021669 135 LLRVQ---GRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIF-SVGGDISDANVVKFSNDGRLMLLTTM--EGH 206 (309)
Q Consensus 135 ~~~~~---~~~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~v~~s~dg~~l~~~~~--dg~ 206 (309)
..... ......+++++..+.++. ++.|.+||+........... ...........++|||||++|+++.. ++.
T Consensus 204 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 204 AFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred ceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 11111 123467888887555544 78999999864221111111 11122234568999999998866554 589
Q ss_pred EEEEECC--CCeEeEEeeecCCCCCccceEEECCCCCEEEEEc-CCCcEEEEEC--CCCceEEEe-ecCCCCCcEEEEC
Q 021669 207 IHVLDSF--RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVYAWSV--RSGKEVASW-MSFDTEPPVIKWT 279 (309)
Q Consensus 207 v~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s-~Dg~i~vwd~--~~~~~~~~~-~~~~~~v~~l~~~ 279 (309)
|.+|++. ++++....... . ...+..++|+|||++|++++ .++.|.+|++ .+++..... ..+...+.||+|.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9999985 45532222211 1 23456799999999998887 6789999654 566554332 1233467888875
No 156
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=5.6e-20 Score=160.24 Aligned_cols=238 Identities=11% Similarity=0.137 Sum_probs=174.0
Q ss_pred ceeEEEEecCCCEEEEEcCCCC----CceeEEEEccCCceEEEeeecccCEEEEEecCCCCe-EEEecCCCcEEEeeCCC
Q 021669 55 GVDLVCFTSHPTTVIYSSKNGW----DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDC-FISGSLDRTVLLWDQRA 129 (309)
Q Consensus 55 ~v~~~~~~~~~~~~~~~s~~g~----d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~Dg~v~~Wd~~~ 129 (309)
.+..++++++++.+++++.++. ++.|.+||..+++.+..+... ..+..+.|+|+++. +++...++.|.+||.++
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 4678899999999888775443 679999999999988877643 45788999999984 55667789999999998
Q ss_pred ceeeeeeeecC-----------ceeEEECCCCcEEEEEE---CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC
Q 021669 130 EKCQGLLRVQG-----------RPAAAYDDQGLVFAVAF---GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG 195 (309)
Q Consensus 130 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg 195 (309)
++....+.... .....+++++..+..+. ++.|.+||....+. ...+.........++++|+|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL----KTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE----EEEECCCCTTCCCCEEETTT
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce----EEEecCCCCccceEEECCCC
Confidence 88766665432 12356667665444332 68899999875431 22222222346778999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEeEEeeecCC-CCCccceEEECCCCCEEEEEcC-CCcEEEEECCCCceEEEeecCCCCC
Q 021669 196 RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEASFSPEGMFVISGSG-DGSVYAWSVRSGKEVASWMSFDTEP 273 (309)
Q Consensus 196 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~sp~g~~l~s~s~-Dg~i~vwd~~~~~~~~~~~~~~~~v 273 (309)
+.++++..++.|.+||..+++.+..+..... +...+..++|+|+|++++.++. ++.|++||+.+++.+..+.... .
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~ 274 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--S 274 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--C
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--C
Confidence 9999999999999999999998877654221 2334567899999998777655 5899999999998887776433 3
Q ss_pred cEEEECCCee-EEEEccceEEEeeecC
Q 021669 274 PVIKWTPGSL-MFVTGSSELSFWIPDL 299 (309)
Q Consensus 274 ~~l~~~p~~~-~l~s~~~d~~~~~~~~ 299 (309)
..++|+|+++ ++++...+..++.+++
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 6799999987 4555545555555544
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=3.6e-20 Score=163.31 Aligned_cols=252 Identities=8% Similarity=0.051 Sum_probs=167.9
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcC-CCceeeeeecc-ccceeEEEEecCCCEE-EEEcC------CC-----C
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVT-AATCLKTINSK-KYGVDLVCFTSHPTTV-IYSSK------NG-----W 76 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~s~------~g-----~ 76 (309)
...+..++|+|+|++|++++.+ +|.+||+. +++..+..... ......++++|+++.+ ++.+. .+ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 3467889999999999999988 99999997 77765433211 1124557899999863 33331 01 3
Q ss_pred CceeEEEEcc-CCceEEEee----ecccCEEEEEecCCCCeEEEec-CCCcEEEeeCC-CceeeeeeeecCceeEEECCC
Q 021669 77 DESLRLLSLH-DNKYLRYFK----GHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQR-AEKCQGLLRVQGRPAAAYDDQ 149 (309)
Q Consensus 77 d~~i~~~d~~-~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~s-~Dg~v~~Wd~~-~~~~~~~~~~~~~~~~~~~~~ 149 (309)
++++++|++. .++....+. .+...+.+++|+|||++++++. .++.|++||+. +++......
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~------------ 185 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGS------------ 185 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEE------------
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeee------------
Confidence 7899999997 466544443 2556899999999999877665 46799999986 443211000
Q ss_pred CcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEe-CCCcEEEEECC--CCeEeE---Eeee
Q 021669 150 GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSF--RGTLLS---TYNV 223 (309)
Q Consensus 150 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~-~dg~v~i~d~~--~~~~~~---~~~~ 223 (309)
. ....+......++|+|||++++++. .++.|.+|+.. ++++.. ....
T Consensus 186 --------------~-------------~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 238 (365)
T 1jof_A 186 --------------V-------------DAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL 238 (365)
T ss_dssp --------------E-------------ECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred --------------E-------------ecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence 0 0000012356789999999887766 47899999764 565432 2221
Q ss_pred cCCC----CC------ccceEE-ECCCCCEEEEEcCCC------cEEEEECC-CCceEE---EeecCCCCCcEEEECC--
Q 021669 224 KPVS----RN------STLEAS-FSPEGMFVISGSGDG------SVYAWSVR-SGKEVA---SWMSFDTEPPVIKWTP-- 280 (309)
Q Consensus 224 ~~~~----~~------~~~~~~-~sp~g~~l~s~s~Dg------~i~vwd~~-~~~~~~---~~~~~~~~v~~l~~~p-- 280 (309)
.+.. .. .+..++ |+|||++|+++..+. +|.+|++. +++... ....+...+..++|+|
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence 1111 11 366799 999999998776433 89999996 555432 2334566788899999
Q ss_pred -CeeEEEEccc---eEEEeeecCCCc
Q 021669 281 -GSLMFVTGSS---ELSFWIPDLSKL 302 (309)
Q Consensus 281 -~~~~l~s~~~---d~~~~~~~~~~~ 302 (309)
|+++|++++. .+++|.++...|
T Consensus 319 ~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 319 WSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp TCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred cCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 7888877764 378887776544
No 158
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.88 E-value=9.1e-20 Score=160.60 Aligned_cols=270 Identities=13% Similarity=0.088 Sum_probs=185.6
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEee----------CCCcEEEEEcCCCceeeeeecc------ccceeEEEEecCCC
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK------KYGVDLVCFTSHPT 66 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s----------~D~~v~iWd~~~~~~~~~~~~~------~~~v~~~~~~~~~~ 66 (309)
+..++..+..+ .+.|+|||+++.++. .|++|.+||..+++.++++... ......++++|+++
T Consensus 43 ~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~ 120 (361)
T 2oiz_A 43 FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK 120 (361)
T ss_dssp EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS
T ss_pred EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC
Confidence 44555555555 899999999988876 3678999999999988887643 12356789999999
Q ss_pred EEEEEcCCCCCceeEEEEccCCceEEE-eeecccCEEEEEecCCC-CeEEEecCCCcEEEeeCCC-ceeeeee------e
Q 021669 67 TVIYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRA-EKCQGLL------R 137 (309)
Q Consensus 67 ~~~~~s~~g~d~~i~~~d~~~~~~~~~-~~~h~~~v~~v~~~~~~-~~l~s~s~Dg~v~~Wd~~~-~~~~~~~------~ 137 (309)
+++++.. +.+++|.+||+++++.+.. +. +. ....+.+.|++ ..+++.+.||++.+|+.+. ++..... .
T Consensus 121 ~l~v~n~-~~~~~v~v~d~~~~~~~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 121 FIVLQNA-SPATSIGIVDVAKGDYVEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp EEEEEEE-SSSEEEEEEETTTTEEEEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred EEEEECC-CCCCeEEEEECCCCcEEEEEec-CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 9887753 2267899999999987766 43 22 22345667765 5788889999999999764 4433111 1
Q ss_pred ecCcee-EEECC-CCcEEEEEECCEEEEEECCCCCcCCceEEEeCC--------CCCCCeEEEEccCCCEEEEEeC----
Q 021669 138 VQGRPA-AAYDD-QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLLTTM---- 203 (309)
Q Consensus 138 ~~~~~~-~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~v~~s~dg~~l~~~~~---- 203 (309)
....+. ....+ ...++....++.+.++|+..........+.+.. .......++|+||++.+.....
T Consensus 198 ~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~ 277 (361)
T 2oiz_A 198 VKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGK 277 (361)
T ss_dssp TTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCC
T ss_pred CCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCC
Confidence 111110 00111 223444556788999997543211111111100 0112233789999776665432
Q ss_pred -------CCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCC--ceEEEeecCCCCCc
Q 021669 204 -------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG--KEVASWMSFDTEPP 274 (309)
Q Consensus 204 -------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~--~~~~~~~~~~~~v~ 274 (309)
.+.|.+||+.+++.+.++... . +..++|+|||++|++++. ++|.+||..++ +.+.++..+...+.
T Consensus 278 ~~~~~~~~~~v~viD~~t~~~v~~i~~~---~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~ 351 (361)
T 2oiz_A 278 EGTHKFPAAEIWVMDTKTKQRVARIPGR---D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASL 351 (361)
T ss_dssp TTCTTCCCSEEEEEETTTTEEEEEEECT---T--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEE
T ss_pred cccccCCCceEEEEECCCCcEEEEEecC---C--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcE
Confidence 348999999999998887642 2 678999999999999987 99999999999 88888877777888
Q ss_pred EEEECCCee
Q 021669 275 VIKWTPGSL 283 (309)
Q Consensus 275 ~l~~~p~~~ 283 (309)
.++++|+|+
T Consensus 352 ~~~~~p~G~ 360 (361)
T 2oiz_A 352 QVQFHPVGG 360 (361)
T ss_dssp EEEECCCSC
T ss_pred EEEecCCCC
Confidence 999999985
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=2.5e-21 Score=185.21 Aligned_cols=279 Identities=11% Similarity=0.074 Sum_probs=184.2
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeecccc---ceeEEEEecCCCEEEEEcCC------CCCceeEEEEcc
Q 021669 16 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKN------GWDESLRLLSLH 86 (309)
Q Consensus 16 ~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~s~~------g~d~~i~~~d~~ 86 (309)
+++|+|+|++++++ .|++|++||+.++++...+..+.. .+..++|+|+++.+++++.. +.++++++||+.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 78999999666554 699999999999998888776654 48899999999999887631 125899999999
Q ss_pred CCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--------------------ceeEEE
Q 021669 87 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--------------------RPAAAY 146 (309)
Q Consensus 87 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--------------------~~~~~~ 146 (309)
+++.+.. ......+..++|+|||+.|+.++ |+.|++||+.+++......... .....+
T Consensus 99 ~g~~~~~-~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 99 NGEFVRG-NELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTEECCS-SCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCccccc-eecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 8875210 11235688999999999999886 8899999998776543221110 025678
Q ss_pred CCCCcEEEEEE-CC----------------------------------EEEEEECCCCCcC-CceE---EEeCCCCCCCe
Q 021669 147 DDQGLVFAVAF-GG----------------------------------YIRMFDARKYEKG-PFDI---FSVGGDISDAN 187 (309)
Q Consensus 147 ~~~~~~~~~~~-~~----------------------------------~i~~~d~~~~~~~-~~~~---~~~~~~~~~~~ 187 (309)
+|++..++.+. +. .|++||+...+.. ...+ ..+.++...+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 88887666543 31 7889987653210 0011 01123344568
Q ss_pred EEEEccCCCEEEEEeCC----CcEEEEE----CCCCeEeEEee-ecCCCCCccc-----eEEECCCCCEEEE--EcCCC-
Q 021669 188 VVKFSNDGRLMLLTTME----GHIHVLD----SFRGTLLSTYN-VKPVSRNSTL-----EASFSPEGMFVIS--GSGDG- 250 (309)
Q Consensus 188 ~v~~s~dg~~l~~~~~d----g~v~i~d----~~~~~~~~~~~-~~~~~~~~~~-----~~~~sp~g~~l~s--~s~Dg- 250 (309)
.++||||++++++.... ..|.+|| ..+++...... ....+...+. .+.|+|||+.++. ...+|
T Consensus 257 ~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~ 336 (719)
T 1z68_A 257 WLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGY 336 (719)
T ss_dssp EEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSC
T ss_pred EeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCc
Confidence 89999998877764432 2488899 77766543221 0012233333 6799999996554 44555
Q ss_pred -cEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEE-Eccc------eEEEeeecC
Q 021669 251 -SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFV-TGSS------ELSFWIPDL 299 (309)
Q Consensus 251 -~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~-s~~~------d~~~~~~~~ 299 (309)
.|++||+.+++ ...+..+...+..+.++ +++.++ ++.. ..++|..++
T Consensus 337 ~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 337 KHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred eEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 57777887665 44555555566777766 665444 4432 278887765
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=4.7e-20 Score=163.25 Aligned_cols=282 Identities=10% Similarity=0.027 Sum_probs=182.2
Q ss_pred ceEecCCCcc-----eEEEEeCCCCCEEEEeeCC---CcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCC
Q 021669 4 GMSFRDYNGR-----ISSMDFHKSSSYLVTASDD---ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG 75 (309)
Q Consensus 4 ~~~~~~h~~~-----V~~i~~s~~~~~l~t~s~D---~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g 75 (309)
..++..+... +..++|+|||++|+.++.+ ..|.+||+.+++..+....+........|+|+++.+++++.
T Consensus 23 ~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~-- 100 (396)
T 3c5m_A 23 VTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN-- 100 (396)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET--
T ss_pred eEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc--
Confidence 3445444433 7788999999998777543 36888899888765554443322334789999999988764
Q ss_pred CCceeEEEEccCCceEEEeeecccCEEE-------------------EEecCCCCeEEEe-----cCCCcEEEeeCCCce
Q 021669 76 WDESLRLLSLHDNKYLRYFKGHHDRVVS-------------------LSLCSSKDCFISG-----SLDRTVLLWDQRAEK 131 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~-----s~Dg~v~~Wd~~~~~ 131 (309)
+..+.+||+.+++....+..+...... +.++|+++.++.. ..+..|.+||+.+++
T Consensus 101 -~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 101 -ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp -TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred -CCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 558999999998876666655543333 3467777766544 457789999998876
Q ss_pred eeeeeeecC-ceeEEECC-CCc-EEEEEEC------CEEEEEECCCCCcCCceEEEeCCC--CCCCeEEEEccCCCEEEE
Q 021669 132 CQGLLRVQG-RPAAAYDD-QGL-VFAVAFG------GYIRMFDARKYEKGPFDIFSVGGD--ISDANVVKFSNDGRLMLL 200 (309)
Q Consensus 132 ~~~~~~~~~-~~~~~~~~-~~~-~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~v~~s~dg~~l~~ 200 (309)
......... .....+++ ++. ++.+..+ ..|.+||+..... ..+... ...+..++|||||+.|+.
T Consensus 180 ~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 180 LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----RKIKEHAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----EESSCCCTTEEEEEEEECTTSSCEEE
T ss_pred EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-----eEeeccCCCccccceEECCCCCEEEE
Confidence 544433222 22345566 454 3333332 3578888653221 111111 123566899999998777
Q ss_pred EeCC-----CcEEEEECCCCeEeEEeeecCCCCCccceEEECC-CCCEEEEEc----------------CCCcEEEEECC
Q 021669 201 TTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP-EGMFVISGS----------------GDGSVYAWSVR 258 (309)
Q Consensus 201 ~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp-~g~~l~s~s----------------~Dg~i~vwd~~ 258 (309)
.+.+ +.|++||+.+++........ . . ...|+| ||++++.++ .+..|++||+.
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~----~-~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPETLENEEVMVMP----P-C-SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEETTTCCEEEEEECTTTCCEEEEEECC----S-E-EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EecCCCCccceEEEEECCCCCeEEeeeCC----C-C-CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 6543 44999999887654332211 1 1 278999 999988765 34789999998
Q ss_pred CCceEEEeecCCC-----------CCcEEEECCCeeEEEEccc---eEEEeeecCC
Q 021669 259 SGKEVASWMSFDT-----------EPPVIKWTPGSLMFVTGSS---ELSFWIPDLS 300 (309)
Q Consensus 259 ~~~~~~~~~~~~~-----------~v~~l~~~p~~~~l~s~~~---d~~~~~~~~~ 300 (309)
+++. ..+..+.. .+..++|+||++.|+.++. ...+|..++.
T Consensus 329 ~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~ 383 (396)
T 3c5m_A 329 AKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVP 383 (396)
T ss_dssp TTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEc
Confidence 8764 34445544 2567899999987776654 2567766543
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=1.1e-18 Score=151.66 Aligned_cols=230 Identities=8% Similarity=0.033 Sum_probs=159.4
Q ss_pred EEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecc-cCEEEEEecCCCCeE-EEecCCCcEEEeeCCCceeeeee
Q 021669 59 VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH-DRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLL 136 (309)
Q Consensus 59 ~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l-~s~s~Dg~v~~Wd~~~~~~~~~~ 136 (309)
+++++++..+++++. +++|++||+.+++.+..+..+. ..+..++|+|+++.+ ++...++.|.+||+++++....+
T Consensus 5 ~~~~~~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 5 PALKAGHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCTTCEEEEEEET---TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccccCCCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 345555555555543 7899999999999888877553 257889999999854 56678999999999988776655
Q ss_pred eecC--------ceeEEECCCCcEEEEEE-------------CCEEEEEECCCCCcC-CceEEEeCCCCCCCeEEEEccC
Q 021669 137 RVQG--------RPAAAYDDQGLVFAVAF-------------GGYIRMFDARKYEKG-PFDIFSVGGDISDANVVKFSND 194 (309)
Q Consensus 137 ~~~~--------~~~~~~~~~~~~~~~~~-------------~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~v~~s~d 194 (309)
.... .....+++++..+.++. ++.|.+||+...+.. ...... ....+.+++++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~s~d 158 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP---MPRQVYLMRAADD 158 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE---CCSSCCCEEECTT
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc---CCCcccceeECCC
Confidence 4322 23467778776555544 489999998753211 112222 1235778899999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEeEEeeecCC------------------------------------------------
Q 021669 195 GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV------------------------------------------------ 226 (309)
Q Consensus 195 g~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~------------------------------------------------ 226 (309)
|+ +.+++ +.|++||..+++.+..+.....
T Consensus 159 g~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 159 GS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp SC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred Cc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 99 44443 3499999988887765542210
Q ss_pred -----------------CCCccceEEECC-CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEc
Q 021669 227 -----------------SRNSTLEASFSP-EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 227 -----------------~~~~~~~~~~sp-~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~ 288 (309)
....+..++|+| ||++++++ ++.|++||+.+++.+..+.. ...+..++|+|+++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEE
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEe
Confidence 001233567889 99999998 89999999999988777653 3457899999999877666
Q ss_pred cceEEEeeecCC
Q 021669 289 SSELSFWIPDLS 300 (309)
Q Consensus 289 ~~d~~~~~~~~~ 300 (309)
+.+..+++|++.
T Consensus 313 ~~~~~v~v~d~~ 324 (349)
T 1jmx_B 313 GTFNDLAVFNPD 324 (349)
T ss_dssp SBSSEEEEEETT
T ss_pred cCCCeEEEEecc
Confidence 666555555543
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=1.3e-18 Score=151.20 Aligned_cols=252 Identities=12% Similarity=0.187 Sum_probs=179.7
Q ss_pred cceEEEEeCCCCCEEEEeeCC------------------------CcEEEEEcCCCceeeeeec-cccceeEEEEecCCC
Q 021669 12 GRISSMDFHKSSSYLVTASDD------------------------ESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPT 66 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D------------------------~~v~iWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 66 (309)
+.+.+|+++|+|+++++.+.+ ++|.+||..+++.+..+.. +-.....+++.++++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 579999999999999998888 4799999998988766653 223577899999988
Q ss_pred EEEEEcCCCCCceeEEEEccCCc-eEEEe---------eecccCEEEEEecC-CCCeEEEec-CCCcEEEeeCCCceeee
Q 021669 67 TVIYSSKNGWDESLRLLSLHDNK-YLRYF---------KGHHDRVVSLSLCS-SKDCFISGS-LDRTVLLWDQRAEKCQG 134 (309)
Q Consensus 67 ~~~~~s~~g~d~~i~~~d~~~~~-~~~~~---------~~h~~~v~~v~~~~-~~~~l~s~s-~Dg~v~~Wd~~~~~~~~ 134 (309)
.+++.. .++.|++||..... .+..+ .++......++++| +++.+++.+ .++.|++||. +++...
T Consensus 104 l~v~d~---~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~ 179 (329)
T 3fvz_A 104 YWVTDV---ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVT 179 (329)
T ss_dssp EEEEET---TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEE
T ss_pred EEEEEC---CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEE
Confidence 544433 26799999986542 45555 34566799999999 788888887 6999999994 443332
Q ss_pred eeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC-CCEEEEEeCCCcEEEEECC
Q 021669 135 LLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSF 213 (309)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-g~~l~~~~~dg~v~i~d~~ 213 (309)
.+...+. +. ...+ +.......++++|+ |+++++...+++|++||..
T Consensus 180 ~~~~~g~----------------~~----------~~~~-------~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 180 QWGEESS----------------GS----------SPRP-------GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EECEECC----------------SS----------SCCT-------TEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeccCCC----------------CC----------CCCC-------cccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 2211000 00 0000 01123568899998 8888888999999999998
Q ss_pred CCeEeEEeeecCCCCCccceEEECC------CCCEEEEEcCCCcEEEEECCCCceEEEee---cCCCCCcEEEECCCeeE
Q 021669 214 RGTLLSTYNVKPVSRNSTLEASFSP------EGMFVISGSGDGSVYAWSVRSGKEVASWM---SFDTEPPVIKWTPGSLM 284 (309)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~sp------~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~---~~~~~v~~l~~~p~~~~ 284 (309)
+++.+..+... .....+..++|+| +|+.+++.+.+..|++||..+++.+..+. .+-..+..|+++|+|.+
T Consensus 227 ~G~~~~~~~~~-~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 227 TKEFVREIKHA-SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTV 305 (329)
T ss_dssp TCCEEEEECCT-TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEE
T ss_pred CCcEEEEEecc-ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCE
Confidence 89888876533 2334567889999 44433334445699999999999888873 55566889999999998
Q ss_pred EEEccceEEEeeecCCC
Q 021669 285 FVTGSSELSFWIPDLSK 301 (309)
Q Consensus 285 l~s~~~d~~~~~~~~~~ 301 (309)
+++...+.+++.+++..
T Consensus 306 yvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 306 YIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEESSSCCEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCc
Confidence 88887775555555443
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=4.4e-20 Score=177.38 Aligned_cols=275 Identities=8% Similarity=0.066 Sum_probs=182.1
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccc---e--eEEEEecCCCEEEEEcCC------CCCc
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYG---V--DLVCFTSHPTTVIYSSKN------GWDE 78 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~---v--~~~~~~~~~~~~~~~s~~------g~d~ 78 (309)
+.....++.|+|||.+++++ |++|++||+.++++...+.++... + ...+|+||++.+++++.. ...+
T Consensus 15 ~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 15 YRLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp SCCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 34456789999999999886 999999999999998888777543 2 237889999999887631 0115
Q ss_pred eeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC------------------
Q 021669 79 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------------------ 140 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~------------------ 140 (309)
.+.+||+++++.. .+..|.+.+..+.|+|||+.|+.++ |+.|.+||..+++.........
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6779999998754 4677888999999999999998885 7899999988766432211000
Q ss_pred --ceeEEECCCCcEEEEE-E-CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCC--
Q 021669 141 --RPAAAYDDQGLVFAVA-F-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR-- 214 (309)
Q Consensus 141 --~~~~~~~~~~~~~~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~-- 214 (309)
.....++|++..++.. . +..+++|++....... ........+.+.+.|.. ....+|++||+.+
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~-------~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES-------LQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLS 239 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT-------CSSCEEEEEECCBTTSC----CCEEEEEEEETTSCC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC-------CCCCcceeecCCCCcCc----CCeeEEEEEECCCCC
Confidence 1125678888765544 3 3457777654322110 11223455667666643 1223688999988
Q ss_pred -CeE--eEEeeecC---CCCCccceEEECCCCCEEEEEc----CCCcEEEEECCCCc----e--EEEe--ecCCCCCc--
Q 021669 215 -GTL--LSTYNVKP---VSRNSTLEASFSPEGMFVISGS----GDGSVYAWSVRSGK----E--VASW--MSFDTEPP-- 274 (309)
Q Consensus 215 -~~~--~~~~~~~~---~~~~~~~~~~~sp~g~~l~s~s----~Dg~i~vwd~~~~~----~--~~~~--~~~~~~v~-- 274 (309)
++. ...+.... .+...+..++|||||+.++... .+..|++||+.+++ + +..+ ..|...+.
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~ 319 (740)
T 4a5s_A 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRF 319 (740)
T ss_dssp SSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSS
T ss_pred CCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccC
Confidence 731 22222100 1345577899999999766653 33479999999887 2 2222 34555444
Q ss_pred ---EEEECCCeeEEE-Eccce---EEEeeecC
Q 021669 275 ---VIKWTPGSLMFV-TGSSE---LSFWIPDL 299 (309)
Q Consensus 275 ---~l~~~p~~~~l~-s~~~d---~~~~~~~~ 299 (309)
.++|+|||+.++ ..+.. .++|.+++
T Consensus 320 ~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 320 RPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp SCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred cCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 789999998776 55432 55555443
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=2.7e-20 Score=173.95 Aligned_cols=236 Identities=10% Similarity=0.027 Sum_probs=164.8
Q ss_pred eeeeec-cccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecc-cCEEEEEecCCCCeEEEecC---CC
Q 021669 46 LKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH-DRVVSLSLCSSKDCFISGSL---DR 120 (309)
Q Consensus 46 ~~~~~~-~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~---Dg 120 (309)
++.++. ...++..++|+|||+.+++++. .|+++++|++.+++.. .+..|. ..+..+.|+|| +.+++++. +.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~DG~~la~~s~--~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~ 88 (582)
T 3o4h_A 13 VRDVERLIAVEKYSLQGVVDGDKLLVVGF--SEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAE 88 (582)
T ss_dssp HHHHHHHHHSCEEEEEEEETTTEEEEEEE--ETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSC
T ss_pred HHHHHHHhccchheeecCCCCCeEEEEEc--cCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCc
Confidence 344442 3557999999999999998764 2789999999776654 445555 68999999999 77777765 56
Q ss_pred cEEEeeCCC---ceeeeeeeecCceeEEE--CCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC
Q 021669 121 TVLLWDQRA---EKCQGLLRVQGRPAAAY--DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG 195 (309)
Q Consensus 121 ~v~~Wd~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg 195 (309)
..++|.+.. +...............+ +.++.+++...++.+.+||+...+. ..... .. ...+++||||
T Consensus 89 ~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~---~~l~~--~~--~~~~~~spDG 161 (582)
T 3o4h_A 89 QHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL---RELAR--LP--GFGFVSDIRG 161 (582)
T ss_dssp CEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE---EEEEE--ES--SCEEEEEEET
T ss_pred ceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE---EEeec--CC--CceEEECCCC
Confidence 666765432 22222211222222333 3444566666666677999865321 11111 11 1788999999
Q ss_pred CEEEEEeCC----CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCC--cEEEEECCCCceEEEeecC
Q 021669 196 RLMLLTTME----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG--SVYAWSVRSGKEVASWMSF 269 (309)
Q Consensus 196 ~~l~~~~~d----g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg--~i~vwd~~~~~~~~~~~~~ 269 (309)
+.+++++.+ +.|++||+.+++.. .+. .+...+..++|||||++|+++..|+ .|++||+.+++.. .+..|
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~---~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~ 236 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD---SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELP 236 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCCCE-EEC---CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS
T ss_pred CEEEEEEEcCCCCeEEEEEcCCCCCce-Eee---cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC
Confidence 999988776 78999999887765 332 2345567899999999999888898 8999999998877 66777
Q ss_pred CCCCcEEE--------ECCCeeEEEEccce--EEEeee
Q 021669 270 DTEPPVIK--------WTPGSLMFVTGSSE--LSFWIP 297 (309)
Q Consensus 270 ~~~v~~l~--------~~p~~~~l~s~~~d--~~~~~~ 297 (309)
...+..++ |+||++++++++.+ .++|..
T Consensus 237 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 237 SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 77777777 99999888888776 555654
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=2.5e-19 Score=171.37 Aligned_cols=263 Identities=9% Similarity=0.102 Sum_probs=172.4
Q ss_pred ceEEEEeCCCCCEEEEeeC---------CCcEEEEEcCCCcee--eeeeccccceeEEEEecCCCEEEEEcCCCCCceeE
Q 021669 13 RISSMDFHKSSSYLVTASD---------DESIRLYDVTAATCL--KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 81 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~---------D~~v~iWd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~ 81 (309)
.|.+++|||||++||+++. |++|++||+.+++.+ ..+. ..+..++|+|+++.+++++ +++|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~----~~~i~ 133 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY----QNNIY 133 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE----TTEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceECCCCCEEEEEE----CCeEE
Confidence 3899999999999999887 799999999998873 2232 3577899999999999875 67999
Q ss_pred EEEccCCceEEEe-eecccCE-----------------EEEEecCCCCeEEEecCCC-----------------------
Q 021669 82 LLSLHDNKYLRYF-KGHHDRV-----------------VSLSLCSSKDCFISGSLDR----------------------- 120 (309)
Q Consensus 82 ~~d~~~~~~~~~~-~~h~~~v-----------------~~v~~~~~~~~l~s~s~Dg----------------------- 120 (309)
+||+.+++.+... .++...| .++.|+|||+.|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 9999888765432 3443333 4899999999999988663
Q ss_pred -----------cEEEeeCCCceee--eeee------ecC--ceeEEECCCCcEEEEEEC-----CEEEEEE----CCCCC
Q 021669 121 -----------TVLLWDQRAEKCQ--GLLR------VQG--RPAAAYDDQGLVFAVAFG-----GYIRMFD----ARKYE 170 (309)
Q Consensus 121 -----------~v~~Wd~~~~~~~--~~~~------~~~--~~~~~~~~~~~~~~~~~~-----~~i~~~d----~~~~~ 170 (309)
++++||+.+++.. ..+. ... .....+++++.++....+ ..|.+|| +...+
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 7889999877642 0111 011 234567788776665432 2588888 65432
Q ss_pred cCCceEEEeCCCCCCCe-----EEEEccCCCEEEE--EeCCC--cEEEEECCCCeEeEEeeecCCCCCccceEEECCCCC
Q 021669 171 KGPFDIFSVGGDISDAN-----VVKFSNDGRLMLL--TTMEG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 241 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~-----~v~~s~dg~~l~~--~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~ 241 (309)
...+......++...+. .+.|||||+.++. ...+| +|.+||+..+.. ..+. .+...+..+.++ +++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt---~~~~~v~~~~~~-d~~ 368 (719)
T 1z68_A 294 CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQIT---SGKWEAINIFRV-TQD 368 (719)
T ss_dssp CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECS---CSSSCEEEEEEE-CSS
T ss_pred eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-Eecc---cCceEEEEEEEE-eCC
Confidence 21111000012223333 6789999996554 44555 577778766552 2222 122335556666 887
Q ss_pred EEEEEcCC-----CcEEEEECCC--Cc-eEEEee----cCCCCCcEEEECCCeeEEEE
Q 021669 242 FVISGSGD-----GSVYAWSVRS--GK-EVASWM----SFDTEPPVIKWTPGSLMFVT 287 (309)
Q Consensus 242 ~l~s~s~D-----g~i~vwd~~~--~~-~~~~~~----~~~~~v~~l~~~p~~~~l~s 287 (309)
.|+..+.+ +..++|.+.. +. ....+. +|...+..+.|+|+++.++.
T Consensus 369 ~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~ 426 (719)
T 1z68_A 369 SLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYAL 426 (719)
T ss_dssp EEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred EEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEE
Confidence 77766654 8899998754 32 123332 25566778999999886664
No 166
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=3e-19 Score=161.11 Aligned_cols=199 Identities=13% Similarity=0.078 Sum_probs=140.0
Q ss_pred CCcceEEEEeCCCCCEEE----EeeCCCcEEEEEcCCC--------ce---eeeeeccccceeEEEEecC-CCEEEEEcC
Q 021669 10 YNGRISSMDFHKSSSYLV----TASDDESIRLYDVTAA--------TC---LKTINSKKYGVDLVCFTSH-PTTVIYSSK 73 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~----t~s~D~~v~iWd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~~~~~s~ 73 (309)
|.+.|.+++|+|+|++|+ +|+.|++|+|||+.++ +. ++.+.+|...|..++|+|+ +..+++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 567899999999999999 8999999999999765 22 4556678889999999998 667776654
Q ss_pred CCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeec---------CceeE
Q 021669 74 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---------GRPAA 144 (309)
Q Consensus 74 ~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~---------~~~~~ 144 (309)
|++|++||+++++.+....+|...|.+++|+|++++|++|+.||+|++||++ ++....+..+ .....
T Consensus 171 ---Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 171 ---DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp ---TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred ---CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 8899999999987777778899999999999999999999999999999998 3333333211 11234
Q ss_pred EECCCCcEEEEEE--CC------EEEEEECCCCCcC-CceEEEe-------CCCCCCCeEEEEccCCCEEEEEeC-CCcE
Q 021669 145 AYDDQGLVFAVAF--GG------YIRMFDARKYEKG-PFDIFSV-------GGDISDANVVKFSNDGRLMLLTTM-EGHI 207 (309)
Q Consensus 145 ~~~~~~~~~~~~~--~~------~i~~~d~~~~~~~-~~~~~~~-------~~~~~~~~~v~~s~dg~~l~~~~~-dg~v 207 (309)
.+.++..++++.. +| .+++|++++.... +...... .+.......+..-++.+++++++. ...|
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv 326 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEV 326 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBC
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCce
Confidence 4555555554332 22 4899999864321 1111111 122233333444477777665544 5567
Q ss_pred EEEEC
Q 021669 208 HVLDS 212 (309)
Q Consensus 208 ~i~d~ 212 (309)
.++..
T Consensus 327 ~vl~~ 331 (434)
T 2oit_A 327 SILAR 331 (434)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 77664
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=3.4e-18 Score=161.90 Aligned_cols=289 Identities=12% Similarity=0.052 Sum_probs=191.0
Q ss_pred EecCCCcceEEEEeCCCCCEEEEe--eCCCcEEEEEcCCCceeeeeecccccee---------EEEEe--cCCCE-EEEE
Q 021669 6 SFRDYNGRISSMDFHKSSSYLVTA--SDDESIRLYDVTAATCLKTINSKKYGVD---------LVCFT--SHPTT-VIYS 71 (309)
Q Consensus 6 ~~~~h~~~V~~i~~s~~~~~l~t~--s~D~~v~iWd~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~~~~ 71 (309)
.+.+|...|..++|++++-++++. +.|+..+||....+...+.+..+...+. ...++ |+++. ++++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 456799999999999987777777 6689999999654444555555544444 45455 89998 7776
Q ss_pred cCCCCCceeEEEEcc--CCceEEEeee-----cccCEEEEEecCCCCeEEEecCC----------CcEEEeeCCC-----
Q 021669 72 SKNGWDESLRLLSLH--DNKYLRYFKG-----HHDRVVSLSLCSSKDCFISGSLD----------RTVLLWDQRA----- 129 (309)
Q Consensus 72 s~~g~d~~i~~~d~~--~~~~~~~~~~-----h~~~v~~v~~~~~~~~l~s~s~D----------g~v~~Wd~~~----- 129 (309)
+.. +..|.++++. .......+.. |...+..++|+|||+.|+.++.| ..|.+||+.+
T Consensus 98 ~~~--~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 98 HFG--DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp BTT--TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred ECC--CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 532 4566666665 2033455555 67789999999999999998877 5899999987
Q ss_pred -ceeeeee-eecC-ceeEEECCCCcEEEE-EEC--------CEEEEEECC-CCCcCCceEEEeCCCCCCCeEEEEccCCC
Q 021669 130 -EKCQGLL-RVQG-RPAAAYDDQGLVFAV-AFG--------GYIRMFDAR-KYEKGPFDIFSVGGDISDANVVKFSNDGR 196 (309)
Q Consensus 130 -~~~~~~~-~~~~-~~~~~~~~~~~~~~~-~~~--------~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~v~~s~dg~ 196 (309)
+...... .... .....+++++..++. ..+ ..|++||+. ........... .++...+..++|||||+
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-GGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-EETTBCEEEEEECTTSC
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-CCCCceEcceEECCCCe
Confidence 5443322 1111 223467888876654 434 379999986 32110111111 12234678899999999
Q ss_pred EEEEEeCCC--cEEEEECCCCeEeEEeeecCCCCC-----ccceEEECCCCCEEEEEcCCCcEEEE--ECCCCceEEEee
Q 021669 197 LMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRN-----STLEASFSPEGMFVISGSGDGSVYAW--SVRSGKEVASWM 267 (309)
Q Consensus 197 ~l~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~-----~~~~~~~sp~g~~l~s~s~Dg~i~vw--d~~~~~~~~~~~ 267 (309)
+++++..++ .|.+||..+++............. .+..++|+|+++.+++++. +.++|| |+.+++ +..+.
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence 887887788 677777666665432221100000 1346899999999999999 999999 555554 66777
Q ss_pred cCCCCCcEE-EECCCeeEEEEccce--EEEeeecC
Q 021669 268 SFDTEPPVI-KWTPGSLMFVTGSSE--LSFWIPDL 299 (309)
Q Consensus 268 ~~~~~v~~l-~~~p~~~~l~s~~~d--~~~~~~~~ 299 (309)
.|...+..+ +++++...+++++.+ ..+|.+++
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEET
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEEC
Confidence 777667767 665555566665544 56776654
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=1.3e-17 Score=146.88 Aligned_cols=272 Identities=6% Similarity=-0.000 Sum_probs=184.3
Q ss_pred CCCCEEEEe------eCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcC-------CCCCceeEEEEccC
Q 021669 21 KSSSYLVTA------SDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK-------NGWDESLRLLSLHD 87 (309)
Q Consensus 21 ~~~~~l~t~------s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~-------~g~d~~i~~~d~~~ 87 (309)
++++++... ..|++|.+||..+++.+.++..+..+ .++|+|++++++++.. +..++.|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 355555443 24889999999999988888776655 7899999998887752 12367899999999
Q ss_pred CceEEEeeec------ccCEEEEEecCCCCeEEEecC--CCcEEEeeCCCceeeee-eeecCceeEEECCC--CcEEEEE
Q 021669 88 NKYLRYFKGH------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGRPAAAYDDQ--GLVFAVA 156 (309)
Q Consensus 88 ~~~~~~~~~h------~~~v~~v~~~~~~~~l~s~s~--Dg~v~~Wd~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ 156 (309)
.+.+..+... ......+.++||+++|+.+.. +++|.+||+++++.... +...........+. ..+++.+
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC
Confidence 8888777643 234667899999999988864 68999999999887766 55443322233333 3566666
Q ss_pred ECCEEEEEECCCCCcCCce-EEE----eCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe--EeEEeeecC----
Q 021669 157 FGGYIRMFDARKYEKGPFD-IFS----VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKP---- 225 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~-~~~----~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~---- 225 (309)
.|+.+.+|+..... ... ... .... .....+.++|++..++..+.++.|+++|..... ....+....
T Consensus 171 ~dg~~~~v~~~~~g--~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 171 GDGGLLTINLGEDG--KVASQSRSKQMFSVK-DDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp TTSSEEEEEECTTS--SEEEEEECCCCSCTT-TSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred CCCcEEEEEECCCC--cEeeeccccceEcCC-CCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 78888888864311 111 000 0011 111233457888888888889999999986543 222222110
Q ss_pred -CC--CCccceEEECCCCCEEEEEcC-----------CCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccc-
Q 021669 226 -VS--RNSTLEASFSPEGMFVISGSG-----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS- 290 (309)
Q Consensus 226 -~~--~~~~~~~~~sp~g~~l~s~s~-----------Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~- 290 (309)
.. .....-++|+||+++++.+.. +..|.+||+.+++.+.++..+. +..++|+||+++|.+++.
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~ 325 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGG 325 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSS
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCC
Confidence 00 011113789999888877643 3489999999999999988776 999999999987766554
Q ss_pred eEEEeeecC
Q 021669 291 ELSFWIPDL 299 (309)
Q Consensus 291 d~~~~~~~~ 299 (309)
.+.+|..+-
T Consensus 326 ~v~v~D~~t 334 (361)
T 2oiz_A 326 NVNVYDISQ 334 (361)
T ss_dssp CEEEEECSS
T ss_pred eEEEEECCC
Confidence 477776543
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=1e-16 Score=135.96 Aligned_cols=243 Identities=11% Similarity=0.184 Sum_probs=168.6
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec------cccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
+|-..+.+++++|+++++++...++.|++||.. ++.+..+.. +...+..+++.+....++++.. +.++.|++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~-~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER-SPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC-GGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC-CCCCEEEE
Confidence 344678999999999999999999999999987 666655532 2234677888533334444431 12678999
Q ss_pred EEccCCceEEEee-ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeec----CceeEEECCCCcEEEEE-
Q 021669 83 LSLHDNKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVA- 156 (309)
Q Consensus 83 ~d~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~- 156 (309)
|| .+++.+..+. .+...+.++++.++++.+++...++.|.+||.. ++....+... ....+++++++.++.+.
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 5666666664 344678999999999988888889999999964 3433333211 12345677777766655
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCC-cEEEEECCCCeEeEEeeecCCCCCccceEE
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-HIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 235 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg-~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
.++.|++||.... ....+...+.......++++|+|+++++...++ .|++||. +++.+..+.... ....+..++
T Consensus 183 ~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~~i~ 257 (286)
T 1q7f_A 183 RAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV-KHAQCFDVA 257 (286)
T ss_dssp GGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-CCSCEEEEE
T ss_pred CCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC-CCCcceeEE
Confidence 3789999996421 111121122234678899999999999988886 9999995 566666665432 223456899
Q ss_pred ECCCCCEEEEEcCCCcEEEEECCCCc
Q 021669 236 FSPEGMFVISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 236 ~sp~g~~l~s~s~Dg~i~vwd~~~~~ 261 (309)
++|+|+.+++ +.|++|++|++....
T Consensus 258 ~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 258 LMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred ECCCCcEEEE-CCCCeEEEEEccccc
Confidence 9999987777 579999999986543
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=1.8e-18 Score=152.88 Aligned_cols=244 Identities=10% Similarity=0.045 Sum_probs=161.9
Q ss_pred EEEEcCCCceeeeeeccccceeE-----EEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCC
Q 021669 36 RLYDVTAATCLKTINSKKYGVDL-----VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 110 (309)
Q Consensus 36 ~iWd~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~ 110 (309)
..+|..++..+..+..+...... .+|+|+++.+++++..+....+.+||+.+++......+|...+..+.|+||+
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 44577788888777766544444 7899999999988752223468888999998877777777666677899999
Q ss_pred CeEEEecCCCcEEEeeCCCceeeeeeeecCce----eEEECCCCcEEEEE-----------------------ECCEEEE
Q 021669 111 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDDQGLVFAVA-----------------------FGGYIRM 163 (309)
Q Consensus 111 ~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----------------------~~~~i~~ 163 (309)
+.|+.++.++.+.+||+.+++.......+... ....++++..++.. .+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 99999999999999999988765544433221 12346666665532 2357899
Q ss_pred EECCCCCcCCceEEEeCCCCCCCeEEEEcc-CCCEEEEEeCC------CcEEEEECCCCeEeEEeeecCCCC-CccceEE
Q 021669 164 FDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSR-NSTLEAS 235 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~l~~~~~d------g~v~i~d~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (309)
||+...+. .... .....+..++||| ||+.++....+ ..|.++|...+.... +.. ... ..+...+
T Consensus 173 ~d~~~g~~---~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~--~~~~~~~~~~~ 244 (388)
T 3pe7_A 173 VDLKTGES---TVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKT--HAEGESCTHEF 244 (388)
T ss_dssp EETTTCCE---EEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCC--CCTTEEEEEEE
T ss_pred EECCCCce---EEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eee--CCCCcccccce
Confidence 99875432 1111 2223567889999 99998877653 378888876554332 211 111 2355678
Q ss_pred ECCCCCEEEEEcCC-C----cEEEEECCCCce--EEEeecCC---CCCcEEEECCCeeEEEE
Q 021669 236 FSPEGMFVISGSGD-G----SVYAWSVRSGKE--VASWMSFD---TEPPVIKWTPGSLMFVT 287 (309)
Q Consensus 236 ~sp~g~~l~s~s~D-g----~i~vwd~~~~~~--~~~~~~~~---~~v~~l~~~p~~~~l~s 287 (309)
|||||+.|+..+.+ + .|++||+.+++. +..+..+. .....++|+|||+.|+.
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC--
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCccee
Confidence 99999988665442 2 399999998874 33333210 11333579999987764
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=5.3e-17 Score=140.71 Aligned_cols=277 Identities=11% Similarity=0.177 Sum_probs=186.6
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 90 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~ 90 (309)
+..|.++.|+|++..+++.+.+++++.| .++....+..+...+..++|+++++..++... ++.|.+||.++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~---~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVF---EGNIFKINPETKEI 78 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETT---TCEEEEECTTTCCE
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECC---CCEEEEEeCCCCcE
Confidence 4568899999999888888899999999 35566666666566788899998874444432 67899999998876
Q ss_pred EEEeeecccCEEEEEecCCCCeEEEecCC----CcEEEeeCCCceeeeeeee--c--CceeEEECCCCcEEEEEEC----
Q 021669 91 LRYFKGHHDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRV--Q--GRPAAAYDDQGLVFAVAFG---- 158 (309)
Q Consensus 91 ~~~~~~h~~~v~~v~~~~~~~~l~s~s~D----g~v~~Wd~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~---- 158 (309)
......+...+.+++++++++.+++...+ +.|.+||.+++.....+.. . ......+++++.++.+...
T Consensus 79 ~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 79 KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST 158 (333)
T ss_dssp EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccccc
Confidence 65555677889999999999988887766 6899999887664422221 1 1224566777777766542
Q ss_pred ---CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEE-EEEeCCCcEEEEECCC-CeEeEEee----ecCCCCC
Q 021669 159 ---GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFR-GTLLSTYN----VKPVSRN 229 (309)
Q Consensus 159 ---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l-~~~~~dg~v~i~d~~~-~~~~~~~~----~~~~~~~ 229 (309)
+.|..+|.... .+..+. ........++++|+|+.+ ++...++.|.+||..+ +..+..+. .......
T Consensus 159 ~~~~~l~~~~~~~~---~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~ 233 (333)
T 2dg1_A 159 NPLGGVYYVSPDFR---TVTPII--QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHE 233 (333)
T ss_dssp BCCEEEEEECTTSC---CEEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSS
T ss_pred CCCceEEEEeCCCC---EEEEee--cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCC
Confidence 45666654321 121111 111246789999999855 5556688999999863 33222111 0000113
Q ss_pred ccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCC------CCcEEEECCCee-EEEEccc-----eEEEeee
Q 021669 230 STLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT------EPPVIKWTPGSL-MFVTGSS-----ELSFWIP 297 (309)
Q Consensus 230 ~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~------~v~~l~~~p~~~-~l~s~~~-----d~~~~~~ 297 (309)
.+..++++|+|+.+++...++.|.+||. +++.+..+..... .+..++|+||++ ++++... ...+|..
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~ 312 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTV 312 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEE
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEE
Confidence 4567899999999888888899999998 5666666654332 588999999975 4444443 1456654
Q ss_pred cC
Q 021669 298 DL 299 (309)
Q Consensus 298 ~~ 299 (309)
++
T Consensus 313 ~~ 314 (333)
T 2dg1_A 313 NG 314 (333)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=9.7e-17 Score=139.71 Aligned_cols=264 Identities=8% Similarity=0.045 Sum_probs=171.7
Q ss_pred cceEEEEeCCCCCEEEEee---------CCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCC--CCcee
Q 021669 12 GRISSMDFHKSSSYLVTAS---------DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESL 80 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s---------~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g--~d~~i 80 (309)
..+....+ ||++++-.. .++.|.+||+.+++... + ..+...+|+|+++.+++.+..+ ....|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 45677788 898887642 36789999998876543 3 3467889999999998876432 23458
Q ss_pred EEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCC---------------------------CcEEEeeCCCceee
Q 021669 81 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD---------------------------RTVLLWDQRAEKCQ 133 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D---------------------------g~v~~Wd~~~~~~~ 133 (309)
.+||+.+++.......+ . +..+.|+||++.|+.++.+ ..|.+||+.+++..
T Consensus 88 ~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 88 WVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 88888888766555444 4 9999999999988887643 57889999887762
Q ss_pred eeeeecCceeEEECCCCcEEEEEE-C------C-EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC-
Q 021669 134 GLLRVQGRPAAAYDDQGLVFAVAF-G------G-YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME- 204 (309)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~-~------~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d- 204 (309)
..+.........+++++ ++.++. + . ...+|.+.. +....... . ..+. .+||||+.++..+.+
T Consensus 166 ~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~---~~~~~l~~--~-~~~~--~~spdg~~l~~~~~~~ 236 (347)
T 2gop_A 166 EEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED---GKEEKMFE--K-VSFY--AVDSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET---TEEEEEEE--E-ESEE--EEEECSSCEEEEECCS
T ss_pred eeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCC---CceEEecc--C-ccee--eECCCCCEEEEEEccc
Confidence 33322233345666777 555443 2 1 344554332 11121111 1 2233 349999998887754
Q ss_pred -------CcEEEEECCCCeEeEEeeecCCCCCccce-EEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEE
Q 021669 205 -------GHIHVLDSFRGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVI 276 (309)
Q Consensus 205 -------g~v~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l 276 (309)
..|.+|| +++.... ...+...+.. +.|+ || .+++++.|+.+++| +.+++. ..+..+...+..+
T Consensus 237 ~~~~~~~~~l~~~d--~~~~~~l---~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~ 307 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEVMGI---LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGF 307 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCEEES---STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEE
T ss_pred cCCccccceEEEEC--CCceEec---cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEee
Confidence 3688888 5543321 1123345554 8899 88 99999999999999 876554 4444557778899
Q ss_pred EECCCeeEEEEccce---EEEeeecCCCcccc
Q 021669 277 KWTPGSLMFVTGSSE---LSFWIPDLSKLGAY 305 (309)
Q Consensus 277 ~~~p~~~~l~s~~~d---~~~~~~~~~~~~~~ 305 (309)
+|+| .++++++.+ .++|..+ ..+.++
T Consensus 308 ~~s~--~~~~~~~~~~~~~~l~~~~-g~~~~l 336 (347)
T 2gop_A 308 DVDE--IVVYLKETATRLRELFTWD-GEEKQL 336 (347)
T ss_dssp EESS--SEEEEEECSSSCCEEEEES-SSEEEC
T ss_pred eeeC--cEEEEEcCCCChHHheEeC-CcEEEe
Confidence 9999 555555543 4788876 444433
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=1e-15 Score=130.65 Aligned_cols=259 Identities=12% Similarity=0.072 Sum_probs=165.2
Q ss_pred eEecCCCcceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 5 MSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
..+..+.....++.|+|+|+ +++++..++.|..||..++ .+.+..+...+..+++.+++..+++... ++.|.+|
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~---~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHG---LRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETT---TTEEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecC---CCeEEEE
Confidence 44556666788999999998 7888889999999999877 5666655566788999999886554432 5689999
Q ss_pred EccCCceEEEeeec----ccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECC
Q 021669 84 SLHDNKYLRYFKGH----HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG 159 (309)
Q Consensus 84 d~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (309)
|..+++........ ...+..+++.|+|++++|.+.+|+...+..... ..... .+
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~----~~~~~------------------~~ 153 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGG----EMELP------------------GR 153 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCC----CCCSS------------------SC
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccc----cccCC------------------Cc
Confidence 99888754443322 234667899999988887432222100000000 00000 00
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECC-CCeE---eEEeeecCCCCCccceEE
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RGTL---LSTYNVKPVSRNSTLEAS 235 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~-~~~~---~~~~~~~~~~~~~~~~~~ 235 (309)
.|..++.. +.+. .+.......+.++++|||+.+++.+.++.|++||.. ++.+ ...+ ......+..++
T Consensus 154 ~l~~~~~~----g~~~--~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~---~~~~~~p~~i~ 224 (296)
T 3e5z_A 154 WVFRLAPD----GTLS--APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF---TVEPGKTDGLR 224 (296)
T ss_dssp EEEEECTT----SCEE--EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE---CCSSSCCCSEE
T ss_pred EEEEECCC----CCEE--EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe---eCCCCCCCeEE
Confidence 11111110 0000 001112234678999999999777788999999986 5554 2222 12334456799
Q ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEE-CCCeeEEEEccce-EEEeeecCCCcc
Q 021669 236 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKW-TPGSLMFVTGSSE-LSFWIPDLSKLG 303 (309)
Q Consensus 236 ~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~-~p~~~~l~s~~~d-~~~~~~~~~~~~ 303 (309)
++|+|+.+++. ++.|.+||.. ++.+..+..+.. +++++| +|+++.|..++.+ +....+.-.+|+
T Consensus 225 ~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 225 VDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGLE 290 (296)
T ss_dssp EBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBCC
T ss_pred ECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccccc
Confidence 99999977777 7889999986 777777777776 999999 6888766555544 333344444444
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=6.7e-17 Score=154.14 Aligned_cols=250 Identities=12% Similarity=0.040 Sum_probs=161.5
Q ss_pred CCCcceEEEEeCCCCCEEE-----EeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCC--------
Q 021669 9 DYNGRISSMDFHKSSSYLV-----TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG-------- 75 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~-----t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g-------- 75 (309)
+|+..+.+++|||||++|| +|+.+.+|++||+.+++.+..-.........++|+|+++.+++++...
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 5666799999999999998 666678999999999886511111111125789999999998886522
Q ss_pred --CCceeEEEEccCCc----eEEEeeecccCEEEEEecCCCCeEEEecCCC----cEEEeeCCCceeeeeeeec-CceeE
Q 021669 76 --WDESLRLLSLHDNK----YLRYFKGHHDRVVSLSLCSSKDCFISGSLDR----TVLLWDQRAEKCQGLLRVQ-GRPAA 144 (309)
Q Consensus 76 --~d~~i~~~d~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg----~v~~Wd~~~~~~~~~~~~~-~~~~~ 144 (309)
....|++|++.+++ .+.....|...+.++.|+|||++|+.++.++ .|.+||..++......... .....
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 277 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEV 277 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEE
Confidence 12349999998876 2333344667889999999999988887666 6777765444333222211 11222
Q ss_pred EECCCCcEEEEEE----CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECC-CCeEeE
Q 021669 145 AYDDQGLVFAVAF----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RGTLLS 219 (309)
Q Consensus 145 ~~~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~-~~~~~~ 219 (309)
...+.+ ++..+. ++.|.+||+...................+..++++ ++.++++...|+..++|... ++....
T Consensus 278 ~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 355 (695)
T 2bkl_A 278 HAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVR 355 (695)
T ss_dssp EEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEE
T ss_pred EecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeE
Confidence 233333 444443 37899999865432111222222112345667787 77888888899988887554 355444
Q ss_pred EeeecCCCCCccceEEECCCCCEEE----EEcCCCcEEEEECCCCce
Q 021669 220 TYNVKPVSRNSTLEASFSPEGMFVI----SGSGDGSVYAWSVRSGKE 262 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~sp~g~~l~----s~s~Dg~i~vwd~~~~~~ 262 (309)
.+... ....+..++++|+++.++ +....++|++||+.+++.
T Consensus 356 ~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 356 TVQLP--GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ECCCS--SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EecCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 43321 134566778999998877 444567999999988763
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.77 E-value=6.4e-16 Score=134.16 Aligned_cols=254 Identities=9% Similarity=0.107 Sum_probs=175.2
Q ss_pred CCCcEEEEEcCCCceeeeeecc----c--cceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEE
Q 021669 31 DDESIRLYDVTAATCLKTINSK----K--YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL 104 (309)
Q Consensus 31 ~D~~v~iWd~~~~~~~~~~~~~----~--~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v 104 (309)
.|++|.+||..+++..+.+... . .....+++ ++..++.+.. .++.|.++|.++++.+..+. .......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~--~~~~v~viD~~t~~~~~~i~-~~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVN--NSHVIFAIDINTFKEVGRIT-GFTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEG--GGTEEEEEETTTCCEEEEEE-CCSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEc--CCCEEEEEECcccEEEEEcC-CCCCCcEE
Confidence 3899999999999877655221 1 12344555 3455555443 26899999999999888885 34678999
Q ss_pred EecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC------ce-eEEECCCCcEEEEEE--CCEEEEEECCCCCcCCce
Q 021669 105 SLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------RP-AAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFD 175 (309)
Q Consensus 105 ~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~ 175 (309)
+++++++..++...++.|.+||+++.+....+.... .+ ...+ ..+.++.+.. ++.|.++|+.+.+. ..
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~--~~ 166 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKV--VD 166 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEE--EE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeE--EE
Confidence 998988666666689999999999988776665433 22 2334 4555555553 78999999875431 11
Q ss_pred EEEeCCCCCCCeEEEEccCCCEEEEEeCC----------CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEE
Q 021669 176 IFSVGGDISDANVVKFSNDGRLMLLTTME----------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 245 (309)
Q Consensus 176 ~~~~~~~~~~~~~v~~s~dg~~l~~~~~d----------g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s 245 (309)
..... .....++++|+|+++++...+ +.|.++|..+++....+.... ......++|+|++++++.
T Consensus 167 ~i~~g---~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~--g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 167 ELTIG---IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL--GDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEECS---SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT--TCCCEEEEECTTSCEEEE
T ss_pred EEEcC---CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC--CCCceeEEEecCCCEEEE
Confidence 22222 234567899999988777655 789999999998877665421 124568999999999988
Q ss_pred EcCCCcEEEEECCCCceEEE-e-ecCCCCCcEEEECC-CeeEEEEc----cce--EEEeeecC
Q 021669 246 GSGDGSVYAWSVRSGKEVAS-W-MSFDTEPPVIKWTP-GSLMFVTG----SSE--LSFWIPDL 299 (309)
Q Consensus 246 ~s~Dg~i~vwd~~~~~~~~~-~-~~~~~~v~~l~~~p-~~~~l~s~----~~d--~~~~~~~~ 299 (309)
+.. .|.+||..+++.... + ......+..++++| +++++++. ... +.+|.++.
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 765 899999988775321 1 11134678899999 67777776 444 55555553
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=7e-16 Score=147.48 Aligned_cols=249 Identities=11% Similarity=0.066 Sum_probs=163.7
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCCC-----cEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCC-------
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDDE-----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW------- 76 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D~-----~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~------- 76 (309)
+|+..+..++|||||++||.++.++ +|++||+.+++.+.....+ ..+..++|+||++.+++++..+.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3555788999999999998776544 8999999999877643222 23567899999999988865322
Q ss_pred ------CceeEEEEccCCce--EEEeee--cccCEEEEEecCCCCeEEEecC-----CCcEEEeeCCC------ce-eee
Q 021669 77 ------DESLRLLSLHDNKY--LRYFKG--HHDRVVSLSLCSSKDCFISGSL-----DRTVLLWDQRA------EK-CQG 134 (309)
Q Consensus 77 ------d~~i~~~d~~~~~~--~~~~~~--h~~~v~~v~~~~~~~~l~s~s~-----Dg~v~~Wd~~~------~~-~~~ 134 (309)
...|++|++.+++. +..+.. |...+..+.|+||+++|+..+. +..|.+||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 23499999988762 233333 5566889999999998887764 67899999875 32 122
Q ss_pred eeeecC-ceeEEECCCCc-EEEEEEC----CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCc--
Q 021669 135 LLRVQG-RPAAAYDDQGL-VFAVAFG----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH-- 206 (309)
Q Consensus 135 ~~~~~~-~~~~~~~~~~~-~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~-- 206 (309)
.+.... .....+.+++. ++..+.. ..|.+||+...................+..+++++++.++++...++.
T Consensus 281 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 281 KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred EeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 222211 11122334443 3333332 369999986543111122221111124667888888888888888884
Q ss_pred EEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEE----cCCCcEEEEECCCCc
Q 021669 207 IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG----SGDGSVYAWSVRSGK 261 (309)
Q Consensus 207 v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~----s~Dg~i~vwd~~~~~ 261 (309)
|.+||+.+++.+..+.. +...+..++++|+++.++.. ...+++++||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 56678767776665543 24556678899999766633 345799999998876
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=1.3e-13 Score=116.91 Aligned_cols=276 Identities=7% Similarity=0.054 Sum_probs=186.2
Q ss_pred ecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeee-eeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEc
Q 021669 7 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 85 (309)
Q Consensus 7 ~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~ 85 (309)
+..+...+.++.++++|++.++...++.|.+||.. ++.... +......+..+++.+++...++... ++.|..||.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECC
Confidence 44566789999999999988887778999999987 543321 1223345778888888775554432 567999987
Q ss_pred cCCceEEEee--ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeee-ee--cCceeEEECCCCcEEEEEE-CC
Q 021669 86 HDNKYLRYFK--GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-RV--QGRPAAAYDDQGLVFAVAF-GG 159 (309)
Q Consensus 86 ~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~-~~ 159 (309)
. ++. ..+. .....+.++.+.++++.+++...++.|..||. +++..... .. ........++++.++.+.. ++
T Consensus 86 ~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 86 K-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNN 162 (299)
T ss_dssp T-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred C-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCC
Confidence 6 332 2232 34567899999999988888878899999998 44433211 11 1123455666777666554 57
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCC
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 239 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 239 (309)
.|..||. .. .+..+...........++++++|+++++...++.|.+||. ++.... +... .....+..++++|+
T Consensus 163 ~i~~~~~-~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~-~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 163 AIGRITE-SG---DITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIP-TPNARPHAITAGAG 235 (299)
T ss_dssp EEEEECT-TC---CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECS-STTCCEEEEEECST
T ss_pred EEEEEcC-CC---cEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECC-CCCCCceeEEECCC
Confidence 8999987 32 2222222223345678999999998888878899999998 666443 3222 22345678999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEe--ecCCCCCcEEEECCCeeEEEEccc-eEEEeeecC
Q 021669 240 GMFVISGSGDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGSS-ELSFWIPDL 299 (309)
Q Consensus 240 g~~l~s~s~Dg~i~vwd~~~~~~~~~~--~~~~~~v~~l~~~p~~~~l~s~~~-d~~~~~~~~ 299 (309)
|+.+++...++.|.+||. +++ +..+ ..+...+.++++ +++++.++... .+..+.++-
T Consensus 236 g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp TCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-
T ss_pred CCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCc
Confidence 998887778899999999 454 3333 334456888999 99888777543 354455543
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=2.4e-15 Score=127.28 Aligned_cols=218 Identities=10% Similarity=0.096 Sum_probs=166.5
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCceeeeeeccc-cceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecc-c
Q 021669 22 SSSYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH-D 99 (309)
Q Consensus 22 ~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~-~ 99 (309)
.+++|++++.|+.|.+||.++|+.+..+..+. ..+..+++.|+++.++ +. ++.|..||. +++.++.+..+. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~----~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SY----SKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-EC----BSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eC----CCCEEEECC-CCCEEEEEcCCCCc
Confidence 46799999999999999999999999988765 4678889999998766 32 668999999 889999988753 5
Q ss_pred CEEEEEecCCCCeEEEecC-CCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEE
Q 021669 100 RVVSLSLCSSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFS 178 (309)
Q Consensus 100 ~v~~v~~~~~~~~l~s~s~-Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 178 (309)
.+.++.+.++|+.+++.+. ++.+..+|. +++.+..+.... ...
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~----------------------------~~~------- 121 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFET----------------------------GIE------- 121 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECC----------------------------SCS-------
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC----------------------------CCC-------
Confidence 7889999999999999877 777777774 444332221110 000
Q ss_pred eCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECC
Q 021669 179 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 179 ~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~ 258 (309)
.+......+++.++|+++++...++.|..||.. |+.+-++... ..+..+.+.|+|+.+++++.++.|..+|..
T Consensus 122 --~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 122 --RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp --SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred --cccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 000122345688999999999999999999987 9988877642 234567888999999999999999999999
Q ss_pred CCceEEEeecCC------CCCcEEEECCCeeEEEEc
Q 021669 259 SGKEVASWMSFD------TEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 259 ~~~~~~~~~~~~------~~v~~l~~~p~~~~l~s~ 288 (309)
+++.+.++.... ..+..++..|+++.+++.
T Consensus 195 tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 999988876432 125678888999888776
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=1.2e-16 Score=141.26 Aligned_cols=243 Identities=10% Similarity=0.063 Sum_probs=152.6
Q ss_pred EEEcCCCceeeeeeccccc-----eeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCC
Q 021669 37 LYDVTAATCLKTINSKKYG-----VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 111 (309)
Q Consensus 37 iWd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~ 111 (309)
..|..++..+..+..+... +..++|+|+++.+++....+.+..+.+||+.+++......++......+.|+||++
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 3377788777666554322 56778999999988876543456788999988876544443333233378999999
Q ss_pred eEEEecCCCcEEEeeCCCceeeeeeeecCce--e---EE----------------ECCCCcEEEE------EECCEEEEE
Q 021669 112 CFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--A---AA----------------YDDQGLVFAV------AFGGYIRMF 164 (309)
Q Consensus 112 ~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~--~---~~----------------~~~~~~~~~~------~~~~~i~~~ 164 (309)
.|+.++.++.+.+||+.+++........... . .+ ..+++..++. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 9999999999999999877654443322110 0 11 1222221111 234578899
Q ss_pred ECCCCCcCCceEEEeCCCCCCCeEEEEcc-CCCEEEEEeCC------CcEEEEECCCCeEeEEeeecCCCCCccceEEEC
Q 021669 165 DARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 237 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~l~~~~~d------g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~s 237 (309)
|+...+. .... .....+..+.|+| +|+.++..+.+ ..|.+||...++...... ......+..++|+
T Consensus 174 d~~~g~~---~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~~~~~~~~~~~s 246 (396)
T 3c5m_A 174 DIETGEL---EVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--HAEGESCTHEFWI 246 (396)
T ss_dssp ETTTCCE---EEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--CCTTEEEEEEEEC
T ss_pred ECCCCcE---Eeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--cCCCccccceEEC
Confidence 9865331 1111 1234567889999 88877766543 368888886554332111 1111235568999
Q ss_pred CCCCEEEEEcCC-----CcEEEEECCCCceEEEeecCCCCCcEEEECC-CeeEEEEcc
Q 021669 238 PEGMFVISGSGD-----GSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTGS 289 (309)
Q Consensus 238 p~g~~l~s~s~D-----g~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p-~~~~l~s~~ 289 (309)
|||++|+.++.+ +.|++||+.+++.... ..... .. ++|+| |+++++.++
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEEV-MVMPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEE-EECCS-EE-EEEECSSSSEEEEEE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEEe-eeCCC-CC-CCccCCCCceEEEec
Confidence 999988887654 4499999988764332 22222 22 89999 999887643
No 180
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=1.9e-15 Score=133.05 Aligned_cols=213 Identities=9% Similarity=0.053 Sum_probs=139.2
Q ss_pred ceEEEEeCCCCCE--EEEee-------------CCCcEEEEEcC-CCceeeeeec----cccceeEEEEecCCCEEEEEc
Q 021669 13 RISSMDFHKSSSY--LVTAS-------------DDESIRLYDVT-AATCLKTINS----KKYGVDLVCFTSHPTTVIYSS 72 (309)
Q Consensus 13 ~V~~i~~s~~~~~--l~t~s-------------~D~~v~iWd~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~s 72 (309)
.+..++|+|||++ +++++ .|+++++|++. +++....+.. +...+..++|+|+++.++++.
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3556899999994 55664 69999999997 4665544432 334578899999999887664
Q ss_pred CCCCCceeEEEEcc-CCceE--EEee--ecccCEEEEEecCCCCeEEEec-CCCcEEEeeCC--CceeeeeeeecCceeE
Q 021669 73 KNGWDESLRLLSLH-DNKYL--RYFK--GHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQR--AEKCQGLLRVQGRPAA 144 (309)
Q Consensus 73 ~~g~d~~i~~~d~~-~~~~~--~~~~--~h~~~v~~v~~~~~~~~l~s~s-~Dg~v~~Wd~~--~~~~~~~~~~~~~~~~ 144 (309)
. + ++.|++||+. +++.. ..+. .|...+..++|+||+++++.++ .++++.+|++. +++....... .
T Consensus 164 ~-~-~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~-----~ 236 (365)
T 1jof_A 164 L-T-ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHS-----F 236 (365)
T ss_dssp T-T-TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE-----E
T ss_pred C-C-CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccce-----E
Confidence 3 2 5789999998 67643 2333 2456799999999999887766 47899999764 3332110000 0
Q ss_pred EECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCC------CCeEEE-EccCCCEEEEEeCC-C-----cEEEEE
Q 021669 145 AYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS------DANVVK-FSNDGRLMLLTTME-G-----HIHVLD 211 (309)
Q Consensus 145 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~------~~~~v~-~s~dg~~l~~~~~d-g-----~v~i~d 211 (309)
...+.+ ..++.. .+..++ |||||++|+++..+ + .|.+|+
T Consensus 237 ~~~~~~----------------------------~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~ 288 (365)
T 1jof_A 237 PLIPPG----------------------------IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFK 288 (365)
T ss_dssp ESSCTT----------------------------CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEE
T ss_pred EcCCCC----------------------------cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEE
Confidence 000000 000000 256789 99999988765532 2 899999
Q ss_pred CC-CCeEeEEeeecCCCCCccceEEECC---CCCEEEEEcCC-CcEEEEECCCC
Q 021669 212 SF-RGTLLSTYNVKPVSRNSTLEASFSP---EGMFVISGSGD-GSVYAWSVRSG 260 (309)
Q Consensus 212 ~~-~~~~~~~~~~~~~~~~~~~~~~~sp---~g~~l~s~s~D-g~i~vwd~~~~ 260 (309)
+. ++++.........+......++|+| ||++|++++.+ +.|++|++...
T Consensus 289 ~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 289 LRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 85 5665432111111222345689999 89999999875 89999999765
No 181
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=7.5e-16 Score=147.92 Aligned_cols=273 Identities=8% Similarity=0.064 Sum_probs=165.7
Q ss_pred eEecCCCcc-----eEEEEeCCCCCEEEEeeCC---------CcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEE
Q 021669 5 MSFRDYNGR-----ISSMDFHKSSSYLVTASDD---------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 70 (309)
Q Consensus 5 ~~~~~h~~~-----V~~i~~s~~~~~l~t~s~D---------~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 70 (309)
..+.+|... ...++|||||++|+.++.| +.+.+||+.++++.+ +..+...+...+|+|+|+.+++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~ 128 (740)
T 4a5s_A 50 VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAY 128 (740)
T ss_dssp EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEE
T ss_pred EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEE
Confidence 345556543 3447889999999999987 455699999988654 5555667889999999999998
Q ss_pred EcCCCCCceeEEEEccCCceEEE-eeecccCE-----------------EEEEecCCCCeEEEecCCC------------
Q 021669 71 SSKNGWDESLRLLSLHDNKYLRY-FKGHHDRV-----------------VSLSLCSSKDCFISGSLDR------------ 120 (309)
Q Consensus 71 ~s~~g~d~~i~~~d~~~~~~~~~-~~~h~~~v-----------------~~v~~~~~~~~l~s~s~Dg------------ 120 (309)
++ |+.|++||+.+++..+. ..++...+ .++.|+|||+.|+.++.|.
T Consensus 129 ~~----~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~ 204 (740)
T 4a5s_A 129 VW----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYS 204 (740)
T ss_dssp EE----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECC
T ss_pred EE----CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeec
Confidence 85 67899999988775442 23444333 3489999999999876432
Q ss_pred ------------------------cEEEeeCCC---c---eeeeeeee------cC--ceeEEECCCCcEEEEEE--C--
Q 021669 121 ------------------------TVLLWDQRA---E---KCQGLLRV------QG--RPAAAYDDQGLVFAVAF--G-- 158 (309)
Q Consensus 121 ------------------------~v~~Wd~~~---~---~~~~~~~~------~~--~~~~~~~~~~~~~~~~~--~-- 158 (309)
++++||+.+ + +... +.. .. .....+++++.+++... +
T Consensus 205 ~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~ 283 (740)
T 4a5s_A 205 DESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ-ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQN 283 (740)
T ss_dssp STTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE-ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTT
T ss_pred CCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE-ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCC
Confidence 477888877 6 2222 111 11 12345667777544332 1
Q ss_pred -CEEEEEECCCCC----cC-CceEEEeCCCCCC-----CeEEEEccCCCEEE-EEeC-C--CcEEEEECCCCeEeEEeee
Q 021669 159 -GYIRMFDARKYE----KG-PFDIFSVGGDISD-----ANVVKFSNDGRLML-LTTM-E--GHIHVLDSFRGTLLSTYNV 223 (309)
Q Consensus 159 -~~i~~~d~~~~~----~~-~~~~~~~~~~~~~-----~~~v~~s~dg~~l~-~~~~-d--g~v~i~d~~~~~~~~~~~~ 223 (309)
..|++||+...+ .. ...+.. ..+... .....|||||+.++ ..+. + .+|++||...+.... +.
T Consensus 284 ~~~i~~~d~~tg~~~~~~~~~~~l~~-~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT- 360 (740)
T 4a5s_A 284 YSVMDICDYDESSGRWNCLVARQHIE-MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-IT- 360 (740)
T ss_dssp EEEEEEEEEETTTTEEEECGGGCEEE-ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SC-
T ss_pred EEEEEEEECCCCccccceeEEEEeee-ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cc-
Confidence 379999987643 11 111111 122222 23578999999877 5553 3 478888987665432 21
Q ss_pred cCCCCCccceEEECCCCCEEEEEcCC-----C--cEEEEECCCCceEEEeec----CCCCCcEEEECCCeeEEEEcc
Q 021669 224 KPVSRNSTLEASFSPEGMFVISGSGD-----G--SVYAWSVRSGKEVASWMS----FDTEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 224 ~~~~~~~~~~~~~sp~g~~l~s~s~D-----g--~i~vwd~~~~~~~~~~~~----~~~~v~~l~~~p~~~~l~s~~ 289 (309)
.. ...+..+ +++|++.|+-.+.. + .|+..++..++....+.. ..+....+.|+|+++.++...
T Consensus 361 -~g-~~~v~~~-~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 361 -KG-TWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRC 434 (740)
T ss_dssp -CS-SSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred -cC-CEEEEEE-EEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEe
Confidence 11 1223332 23556655544332 3 455555544332222321 234677899999998665443
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=1.9e-14 Score=121.91 Aligned_cols=231 Identities=9% Similarity=0.152 Sum_probs=158.9
Q ss_pred ceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEee------ecccCEEEEEe-cCCCCeEEEecC-CCcEEEee
Q 021669 55 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK------GHHDRVVSLSL-CSSKDCFISGSL-DRTVLLWD 126 (309)
Q Consensus 55 ~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~------~h~~~v~~v~~-~~~~~~l~s~s~-Dg~v~~Wd 126 (309)
.+..+++.+++..+++... ++.|.+||.. ++.+..+. +|...+.++++ .++++.+++... ++.|++||
T Consensus 31 ~p~~v~~~~~g~l~v~~~~---~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTN---NHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CEEEEEECTTCCEEEEEGG---GTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CCceEEECCCCCEEEEECC---CCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 4677888888875554432 6789999987 55555553 34567899999 467776666643 89999999
Q ss_pred CCCceeeeeeeec---CceeEEECCCCcEEEEE-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEe
Q 021669 127 QRAEKCQGLLRVQ---GRPAAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 202 (309)
Q Consensus 127 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~ 202 (309)
.+++....+... ......+++++.++.+. .++.|.+||.... ....+...........++++|+|+++++..
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---VLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---EEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC---EEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 455554444221 12345667777766655 3689999985421 112222223344578999999999988888
Q ss_pred CCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCC-cEEEEECCCCceEEEeecCCC--CCcEEEEC
Q 021669 203 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-SVYAWSVRSGKEVASWMSFDT--EPPVIKWT 279 (309)
Q Consensus 203 ~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg-~i~vwd~~~~~~~~~~~~~~~--~v~~l~~~ 279 (309)
.++.|++||. .+..+..+.... ....+..++++|+|+.+++...++ .|++||. +++.+..+..+.. .+..++++
T Consensus 183 ~~~~i~~~~~-~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 183 RAHCVKVFNY-EGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGTEEEEEET-TCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCEEEEEcC-CCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 8999999997 455555543221 124567899999999999988886 9999996 5677777765543 35689999
Q ss_pred CCeeEEEEccce--EEEeee
Q 021669 280 PGSLMFVTGSSE--LSFWIP 297 (309)
Q Consensus 280 p~~~~l~s~~~d--~~~~~~ 297 (309)
|+++++++. .+ +++|.+
T Consensus 260 ~~g~l~vs~-~~~~v~v~~~ 278 (286)
T 1q7f_A 260 DDGSVVLAS-KDYRLYIYRY 278 (286)
T ss_dssp TTTEEEEEE-TTTEEEEEEC
T ss_pred CCCcEEEEC-CCCeEEEEEc
Confidence 999988884 45 566644
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=1.1e-13 Score=119.82 Aligned_cols=243 Identities=9% Similarity=0.076 Sum_probs=161.6
Q ss_pred eEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC-CCCceeEEE
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-GWDESLRLL 83 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-g~d~~i~~~ 83 (309)
..+.++...+.+++|+|+|++++++..++.|.+||..+++.......+...+..+++++++..+++...+ ...+.|.+|
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 4556677778999999999988899999999999998887665443445568889999998766554321 001579999
Q ss_pred EccCCceEEEee--ecccCEEEEEecCCCCeEEEecC------CCcEEEeeCCCceeeeeee-ecCceeEEECCCCcEEE
Q 021669 84 SLHDNKYLRYFK--GHHDRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLR-VQGRPAAAYDDQGLVFA 154 (309)
Q Consensus 84 d~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~------Dg~v~~Wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 154 (309)
|.++++....+. .+...+.++.+.|+++.+++... .+.|..+|..+++...... ........+++++..+.
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEE
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEE
Confidence 998877543333 24467999999999988777654 3566666765544332221 11223456777775443
Q ss_pred EE--ECCEEEEEECCCCCcCCce-----E-EEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC
Q 021669 155 VA--FGGYIRMFDARKYEKGPFD-----I-FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 226 (309)
Q Consensus 155 ~~--~~~~i~~~d~~~~~~~~~~-----~-~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~ 226 (309)
.+ .++.|.+||+.... ..+. . ....+. .....++++++|+++++...++.|.+||. +++.+..+.....
T Consensus 198 v~~~~~~~i~~~d~~~~g-~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~ 274 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDG-VTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGR 274 (333)
T ss_dssp EEEGGGTEEEEEEECTTS-SSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTG
T ss_pred EEeCCCCeEEEEEecCCC-cCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCC
Confidence 33 36899999985311 1111 1 111111 24567899999999888888899999998 5666666543211
Q ss_pred ---CCCccceEEECCCCCEEEEEcCCC
Q 021669 227 ---SRNSTLEASFSPEGMFVISGSGDG 250 (309)
Q Consensus 227 ---~~~~~~~~~~sp~g~~l~s~s~Dg 250 (309)
+...+..++|+||++.|+.++.++
T Consensus 275 ~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp GGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred ccccccCcceEEECCCCCEEEEEeCcc
Confidence 111467899999988777665553
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=2.8e-14 Score=119.58 Aligned_cols=237 Identities=9% Similarity=0.013 Sum_probs=158.4
Q ss_pred ceEEEEeCCCCCEEE-EeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 13 RISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~-t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
...+++++++|++++ +.+.++.|.+||..++........+...+..+++.+++. ++++.. ++.|.+||...+...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF---NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET---TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC---CCEEEEEeCCCceEe
Confidence 677899999999888 657889999999765543322222223467788988887 444332 568999998765433
Q ss_pred EEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCc
Q 021669 92 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEK 171 (309)
Q Consensus 92 ~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 171 (309)
.........+.++++.++++.+++...++.|.+||..+......
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~------------------------------------ 144 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL------------------------------------ 144 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC------------------------------------
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee------------------------------------
Confidence 22223346789999999998888877788898887433211000
Q ss_pred CCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCc
Q 021669 172 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 251 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~ 251 (309)
..........++++|+|+++++...++.|.+||........... .....+..++++|+|+.+++...++.
T Consensus 145 -------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~~~~p~~i~~d~~g~l~v~~~~~~~ 214 (270)
T 1rwi_B 145 -------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF---TDITAPWGIAVDEAGTVYVTEHNTNQ 214 (270)
T ss_dssp -------CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC---SSCCSEEEEEECTTCCEEEEETTTSC
T ss_pred -------ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc---cCCCCceEEEECCCCCEEEEECCCCc
Confidence 00011234568899999988888888999999987655433211 11245668999999988888888999
Q ss_pred EEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 252 VYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 252 i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
|++||............+-..+..++++|+++++++...+.++...++
T Consensus 215 v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 215 VVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred EEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 999999765433322223346788999999998888777655554443
No 185
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.69 E-value=1.7e-13 Score=127.04 Aligned_cols=259 Identities=15% Similarity=0.147 Sum_probs=176.9
Q ss_pred CCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc--CCceEEEeeec
Q 021669 20 HKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYLRYFKGH 97 (309)
Q Consensus 20 s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~--~~~~~~~~~~h 97 (309)
+|.+.++++...|++|.++|..+++.+.++.... .+..+.|+|+++++++++. |+.|.+||+. +++.+..+...
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEEECC
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcC---CCeEEEEECCCCCCcEeEEEecC
Confidence 3555678888899999999999999998887544 3557899999999887753 7799999995 77777777643
Q ss_pred ccCEEEEEec----CCCCeEEEec-CCCcEEEeeCCCceeeeeeeecC------------c-eeEEECCCCc--EEEEEE
Q 021669 98 HDRVVSLSLC----SSKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQG------------R-PAAAYDDQGL--VFAVAF 157 (309)
Q Consensus 98 ~~~v~~v~~~----~~~~~l~s~s-~Dg~v~~Wd~~~~~~~~~~~~~~------------~-~~~~~~~~~~--~~~~~~ 157 (309)
. ....++|+ |||++++.++ .++++.++|..+.+.+..+.+.. . .....++.+. ++....
T Consensus 240 ~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 240 S-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp S-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred C-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 3 36789999 6999877665 56999999998887776654321 1 1223333333 333334
Q ss_pred CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEe-CCCcEEEEECCCCeEeEEeee-cCC-CCCccceE
Q 021669 158 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNV-KPV-SRNSTLEA 234 (309)
Q Consensus 158 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~-~dg~v~i~d~~~~~~~~~~~~-~~~-~~~~~~~~ 234 (309)
.|.|.++|....+. +.+..+.. ......+.|+|+|++++++. .+++|.++|..+++++..... ... |.+.-..
T Consensus 319 ~g~v~~vd~~~~~~--~~v~~i~~-~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~- 394 (567)
T 1qks_A 319 TGKILLVDYTDLNN--LKTTEISA-ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN- 394 (567)
T ss_dssp TTEEEEEETTCSSE--EEEEEEEC-CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-
T ss_pred CCeEEEEecCCCcc--ceeeeeec-cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-
Confidence 58999999765321 11222211 12245678999999876654 678999999999998877654 211 1111111
Q ss_pred EECCCCCEE-EEEc-CCCcEEEEECCC-------CceEEEeecCCCCCcEEEECCCeeEEEE
Q 021669 235 SFSPEGMFV-ISGS-GDGSVYAWSVRS-------GKEVASWMSFDTEPPVIKWTPGSLMFVT 287 (309)
Q Consensus 235 ~~sp~g~~l-~s~s-~Dg~i~vwd~~~-------~~~~~~~~~~~~~v~~l~~~p~~~~l~s 287 (309)
-++|++..+ ++.. .+++|.++|..+ .+.+.++........-++.+|+++.+..
T Consensus 395 ~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v 456 (567)
T 1qks_A 395 FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYV 456 (567)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEE
T ss_pred eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEE
Confidence 268885544 4543 468999999988 6677777665444455889999876544
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.69 E-value=9.9e-15 Score=138.12 Aligned_cols=247 Identities=9% Similarity=0.028 Sum_probs=156.0
Q ss_pred CCcceEEEEeCCCCCEEEEeeCC----------CcEEEEEcCC------Cceeeeee-ccccceeEEEEecCCCEEEEEc
Q 021669 10 YNGRISSMDFHKSSSYLVTASDD----------ESIRLYDVTA------ATCLKTIN-SKKYGVDLVCFTSHPTTVIYSS 72 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D----------~~v~iWd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s 72 (309)
|...+.+++|+|||++|+.++.| .+|.+||+.+ ++.. .+. .+...+..++|+|+++.+++++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEE
Confidence 67789999999999999999987 6899999987 5544 444 4445677789999999998776
Q ss_pred CCC----C-CceeEEEEcc-CC---ceEEEeeecccCEEEEEecCCCCeEEEecCCC--cEEEeeCCCceeeeeeeecCc
Q 021669 73 KNG----W-DESLRLLSLH-DN---KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR--TVLLWDQRAEKCQGLLRVQGR 141 (309)
Q Consensus 73 ~~g----~-d~~i~~~d~~-~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg--~v~~Wd~~~~~~~~~~~~~~~ 141 (309)
... | ..+|.+||+. ++ +......+|...+..+.|+|||+++++++.|+ .|..||..+++..........
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence 432 1 2589999998 56 44555556678999999999999888888888 555566545543322111000
Q ss_pred eeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEE--ECCCCeEeE
Q 021669 142 PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL--DSFRGTLLS 219 (309)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~--d~~~~~~~~ 219 (309)
. ..+. -...+..++|+|++++++++.. +.++|| |...+. +.
T Consensus 287 ~---------------------------~~p~--------w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~ 329 (662)
T 3azo_A 287 F---------------------------AGPL--------WTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LV 329 (662)
T ss_dssp S---------------------------SCCC--------CSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EE
T ss_pred c---------------------------cCcc--------ccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EE
Confidence 0 0000 0012345889999999999988 999998 655555 34
Q ss_pred EeeecCCCCCccceE-EECCCCCEEEEEcCCC--cEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccc--eEEE
Q 021669 220 TYNVKPVSRNSTLEA-SFSPEGMFVISGSGDG--SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSF 294 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~-~~sp~g~~l~s~s~Dg--~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~--d~~~ 294 (309)
.+.. +...+..+ +++++.-.+++++.+. .|++||+.+++.......+...+....+.+.......... .+..
T Consensus 330 ~l~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~ 406 (662)
T 3azo_A 330 DAAG---PWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHA 406 (662)
T ss_dssp ECCS---SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEE
T ss_pred EecC---CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEE
Confidence 4332 22334434 3433333444555554 4666677677644333344444444455555555554432 3444
Q ss_pred eee
Q 021669 295 WIP 297 (309)
Q Consensus 295 ~~~ 297 (309)
|..
T Consensus 407 ~~~ 409 (662)
T 3azo_A 407 HIY 409 (662)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 187
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.68 E-value=6.9e-14 Score=122.69 Aligned_cols=257 Identities=14% Similarity=0.135 Sum_probs=173.2
Q ss_pred EEEeCCCCCEEEEee----------CCCcEEEEEcCCCceeeeeeccc-------cceeEEEEecCCCEEEEEcCCCCCc
Q 021669 16 SMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSKK-------YGVDLVCFTSHPTTVIYSSKNGWDE 78 (309)
Q Consensus 16 ~i~~s~~~~~l~t~s----------~D~~v~iWd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~s~~g~d~ 78 (309)
.+.++|||+++..+. .+++|.+||..+++.+.++.... .....++|+|++++++.+.. ..++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~-~~~~ 160 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF-SPAP 160 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-SSSC
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-CCCC
Confidence 399999999886665 36789999999999988875421 13456899999998887643 2367
Q ss_pred eeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCC-ceeeeeee----ecCce---eEEE-CCC
Q 021669 79 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLR----VQGRP---AAAY-DDQ 149 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~-~~~~~~~~----~~~~~---~~~~-~~~ 149 (309)
.|.++|+++++.+.++.--. . ...+....+.+++.+.||++.+.++.+ ++...... ..... ...+ .++
T Consensus 161 ~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~d 237 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA 237 (386)
T ss_dssp EEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTT
T ss_pred eEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCC
Confidence 89999999999888774321 1 112222455777888899998888876 44321110 00010 1122 356
Q ss_pred CcEEEEEECCEEEEEECCCCCcCCceEEEe--------CCCCCCCeEEEEccCCCEEEEEeC----------CCcEEEEE
Q 021669 150 GLVFAVAFGGYIRMFDARKYEKGPFDIFSV--------GGDISDANVVKFSNDGRLMLLTTM----------EGHIHVLD 211 (309)
Q Consensus 150 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~v~~s~dg~~l~~~~~----------dg~v~i~d 211 (309)
+.++..+.++.+.+.|..........-..+ +-.......++++|+++.+..... ..+|.++|
T Consensus 238 G~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 238 GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp TEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 666667778999999986432111111110 001123345788998877665432 25799999
Q ss_pred CCCCeEeEEeeecCCCCCccceEEECCCCC-EEEEE-cCCCcEEEEECCCCceEEEeecCCCCCcEEEECCC
Q 021669 212 SFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISG-SGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG 281 (309)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~-~l~s~-s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~ 281 (309)
+.+++.+.++... ..++.++|+||++ +|++. ..++.|.|+|..+++.++++.. .+..+.+.+++|
T Consensus 318 ~~t~kv~~~i~vg----~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~-~~~p~~l~~s~d 384 (386)
T 3sjl_D 318 AKTGERLAKFEMG----HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ-LGHGPQVITTAD 384 (386)
T ss_dssp TTTCCEEEEEEEE----EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC-CCSSCCEEEECC
T ss_pred CCCCeEEEEEECC----CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC-CCCCceeEECCc
Confidence 9999999887653 3567899999997 66664 6689999999999999888754 345677888777
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=2.2e-14 Score=124.46 Aligned_cols=206 Identities=9% Similarity=0.094 Sum_probs=145.1
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc-eeeeee---------ccccceeEEEEec-CCCEEEEEcCCCCCc
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-CLKTIN---------SKKYGVDLVCFTS-HPTTVIYSSKNGWDE 78 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~~~~~s~~g~d~ 78 (309)
+-.....|+++|+|+++++...++.|++||..... .+..+. .+-.....+++.+ ++..+++.+ ..++
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~--~~~~ 166 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG--YCNS 166 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC--SSCC
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC--CCCC
Confidence 33567899999999999999999999999986432 455542 2223467899998 555444432 1267
Q ss_pred eeEEEEccCCceEEEeee----------cccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEEC
Q 021669 79 SLRLLSLHDNKYLRYFKG----------HHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYD 147 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~~~~----------h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~ 147 (309)
.|++|| .+++.+..+.. +.....++++.|+ ++.+++...++.|++||..+++....+....
T Consensus 167 ~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~------- 238 (329)
T 3fvz_A 167 RIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS------- 238 (329)
T ss_dssp EEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-------
T ss_pred eEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-------
Confidence 999999 56666666643 3345899999998 7788888889999999987666544332111
Q ss_pred CCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEcc------CCCEEEEEeCCCcEEEEECCCCeEeEEe
Q 021669 148 DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN------DGRLMLLTTMEGHIHVLDSFRGTLLSTY 221 (309)
Q Consensus 148 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~------dg~~l~~~~~dg~v~i~d~~~~~~~~~~ 221 (309)
....+..++++| +|+.+++...+.+|++||..+++.+..+
T Consensus 239 ----------------------------------~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 239 ----------------------------------FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp ----------------------------------TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred ----------------------------------cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 001223444555 4444444455669999999999988876
Q ss_pred eecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 222 NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
.....+...+..++++|+|+.+++...++.|++|++..
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 43233445677899999998888899999999999854
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.68 E-value=6.9e-13 Score=117.00 Aligned_cols=277 Identities=7% Similarity=-0.087 Sum_probs=177.6
Q ss_pred EEeCCCCCEEEEeeC--CC---cEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC-------CCCceeEEEE
Q 021669 17 MDFHKSSSYLVTASD--DE---SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLS 84 (309)
Q Consensus 17 i~~s~~~~~l~t~s~--D~---~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~i~~~d 84 (309)
+...|+++++..... .. +|.++|..+++.+.++.....+ .++++|+++.++.+... ..++.|.++|
T Consensus 26 ~~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 26 EAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred ccCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 344578877655543 22 8899999999988888765443 88999999998887521 1257899999
Q ss_pred ccCCceEEEeeec-------ccCEEEEEecCCCCeEEEecC--CCcEEEeeCCCceeeee-eeecCceeEEECCCCcEEE
Q 021669 85 LHDNKYLRYFKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGRPAAAYDDQGLVFA 154 (309)
Q Consensus 85 ~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--Dg~v~~Wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 154 (309)
..+.+.+..+.-- ......+.++|||++|+.++. +.+|.++| ++++.... +...............+++
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~ 182 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYL 182 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEE
Confidence 9988776655321 123458899999999888764 57899999 99887766 6554332222222334555
Q ss_pred EEECCEEEEEECCCCCcCCceEEEe---CCCCCCC-eEEEEccCCCEEEEEeCCCcEEEEECCCCe--EeEEeeecCC--
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFSV---GGDISDA-NVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKPV-- 226 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~-~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~-- 226 (309)
...|+.+..+|. ..+. ...... .....++ ....+++++..++..+.++++.++|...+. .+..+.....
T Consensus 183 ~~~dg~~~~vd~-~g~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~ 259 (373)
T 2mad_H 183 LCAQGGLAKTDH-AGGA--AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGR 259 (373)
T ss_pred EcCCCCEEEEEC-CCcE--EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcc
Confidence 566888888887 4321 101000 0000111 123466666555555578899999986543 2233321100
Q ss_pred -----CCCccceEEECCCCCEEEEEcC----------CCcEEEEECCCCceEEEeecCCCCCcEEEECCCee-EEEEcc-
Q 021669 227 -----SRNSTLEASFSPEGMFVISGSG----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS- 289 (309)
Q Consensus 227 -----~~~~~~~~~~sp~g~~l~s~s~----------Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~-~l~s~~- 289 (309)
.......++++||++.++.+.. ++.|.++|+.+++.+.++. .......++|+||++ ++.++.
T Consensus 260 ~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~ 338 (373)
T 2mad_H 260 KADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSA 338 (373)
T ss_pred cccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcC
Confidence 0111223789999988877653 3579999999999888884 344689999999998 666655
Q ss_pred ceEEEeeecCC
Q 021669 290 SELSFWIPDLS 300 (309)
Q Consensus 290 ~d~~~~~~~~~ 300 (309)
.+..+.++|..
T Consensus 339 ~~~~V~ViD~~ 349 (373)
T 2mad_H 339 GTEVLHIYDAG 349 (373)
T ss_pred CCCeEEEEECC
Confidence 34555555443
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.68 E-value=8.9e-13 Score=116.30 Aligned_cols=241 Identities=12% Similarity=0.046 Sum_probs=161.1
Q ss_pred EEEeCCCCCEEEEee----------CCCcEEEEEcCCCceeeeeecc-------ccceeEEEEecCCCEEEEEcCCCCCc
Q 021669 16 SMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCFTSHPTTVIYSSKNGWDE 78 (309)
Q Consensus 16 ~i~~s~~~~~l~t~s----------~D~~v~iWd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~s~~g~d~ 78 (309)
.+.|+|||+++..+. .|++|.+||..+++.+.++... ......++++|++++++.+... .++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~-~~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-AGP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC-CCC
Confidence 899999999987775 3788999999998888776532 1123468999999999887532 257
Q ss_pred eeEEEEccCCceEEE-eeecccCEEEEEecCCC-CeEEEecCCCcEEEeeCCCceeeeeee-----ecCce---eEEEC-
Q 021669 79 SLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLR-----VQGRP---AAAYD- 147 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~-~~~h~~~v~~v~~~~~~-~~l~s~s~Dg~v~~Wd~~~~~~~~~~~-----~~~~~---~~~~~- 147 (309)
.|.++| ++++.+.. +.- .. ++.+.|++ +.+++.+.||++.++|. +++...... ....+ ...+.
T Consensus 149 ~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred eEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 899999 99987766 432 11 24455654 46677888999999999 776553221 11111 01112
Q ss_pred CCCcEEEEEECCEEEEEECCCCCcCCceEEEeCC--------CCCCCeEEEEccCCCEEEEEeC----------CCcEEE
Q 021669 148 DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLLTTM----------EGHIHV 209 (309)
Q Consensus 148 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~v~~s~dg~~l~~~~~----------dg~v~i 209 (309)
..+.++....++.+.+.|+..........+.+.. .......+.++||++.+..... .+.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 2334444456778888887542211111111100 1122344789999887666543 357999
Q ss_pred EECCCCeEeEEeeecCCCCCccceEEECCCCC-EEEEEc-CCCcEEEEECCCCceEEEee
Q 021669 210 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVYAWSVRSGKEVASWM 267 (309)
Q Consensus 210 ~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~-~l~s~s-~Dg~i~vwd~~~~~~~~~~~ 267 (309)
+|..+++.+.++... .....++|+|||+ .++++. .++.|.|+|+.+++.++++.
T Consensus 303 ID~~t~~vv~~i~~g----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~ 358 (373)
T 2mad_H 303 VTGLVGQTSSQISLG----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred EECCCCEEEEEEECC----CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeec
Confidence 999999998877532 2456899999999 788877 58999999999999888743
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=3.4e-14 Score=123.51 Aligned_cols=238 Identities=8% Similarity=0.066 Sum_probs=153.6
Q ss_pred cceEEEEeCCCCCEEEEeeCC---Cc--EEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC------------
Q 021669 12 GRISSMDFHKSSSYLVTASDD---ES--IRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN------------ 74 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D---~~--v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~------------ 74 (309)
..+..++|+|||++||.++.+ +. |.+||+.+++..+....+. +..++|+|+++.+++++..
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457789999999999988765 33 7777888887666555443 8889999999998887631
Q ss_pred ------------CCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCC-------cEEEeeCCCceeeee
Q 021669 75 ------------GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR-------TVLLWDQRAEKCQGL 135 (309)
Q Consensus 75 ------------g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg-------~v~~Wd~~~~~~~~~ 135 (309)
.....|.+||+.+++.+..+.. . .+..+.|+||+ .+++++.+. ...+|.+.+++....
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l 213 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKM 213 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEe
Confidence 0135799999998876455555 4 78899999999 877776542 345554434443322
Q ss_pred eeecCceeEEECCCCcEE-EEEEC--------CEEEEEECCCCCcCCceEEEeCCCCCCCeE-EEEccCCCEEEEEeCCC
Q 021669 136 LRVQGRPAAAYDDQGLVF-AVAFG--------GYIRMFDARKYEKGPFDIFSVGGDISDANV-VKFSNDGRLMLLTTMEG 205 (309)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~-~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-v~~s~dg~~l~~~~~dg 205 (309)
... ......++++..+ ..+.+ ..|.+|| .. ... .....+...+.. +.++ || ++++++.++
T Consensus 214 ~~~--~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---~~~-~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 214 FEK--VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GK---EVM-GILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEE--ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SS---CEE-ESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred ccC--cceeeECCCCCEEEEEEccccCCccccceEEEEC--CC---ceE-eccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 221 1112225566544 34432 3677777 21 111 111222334554 7899 88 888899999
Q ss_pred cEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcE-EEEECCCCceEEEeecCCCCC
Q 021669 206 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSV-YAWSVRSGKEVASWMSFDTEP 273 (309)
Q Consensus 206 ~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i-~vwd~~~~~~~~~~~~~~~~v 273 (309)
.+++| ..+++...... ....+..++|+| +.+++++.++.. .+|.+. ++ ...+..|+..+
T Consensus 284 ~~~l~-~~~g~~~~~~~----~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~~ 343 (347)
T 2gop_A 284 SVNLY-IWDGEIKPIAK----GRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDPI 343 (347)
T ss_dssp EEEEE-EESSSEEEEEC----SSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTSTT
T ss_pred cEEEE-EcCCceEEEec----CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHhH
Confidence 99999 77555433221 245677889999 777888777765 777776 44 45566666543
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=5.6e-12 Score=106.81 Aligned_cols=274 Identities=8% Similarity=0.026 Sum_probs=183.5
Q ss_pred CCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceee-eeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC
Q 021669 9 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 87 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~ 87 (309)
.....+.++.++++|++.++...++.|.+||.. ++... .+......+..+++.+++...++... ++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT-
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC-
Confidence 345678899999999998888888999999987 55433 12222245677888887765544321 5679999987
Q ss_pred CceEE-EeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeee-eee--cCceeEEECCCCcEEEEEE-CCEEE
Q 021669 88 NKYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL-LRV--QGRPAAAYDDQGLVFAVAF-GGYIR 162 (309)
Q Consensus 88 ~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~-~~~i~ 162 (309)
++... .+......+.++++.++++..++...++.|..+|.. ++.... +.. ........++++.++.+.. ++.|.
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 55432 222234678999999999988888778899999986 443321 111 1122345666676665554 57899
Q ss_pred EEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCE
Q 021669 163 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 242 (309)
Q Consensus 163 ~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 242 (309)
.+|.. . .+..+...........++++++|+++++....+.|.+||. ++..... ... .....+..++++|+|+.
T Consensus 171 ~~~~~-g---~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~-~~~~~~~~i~~d~~g~l 243 (300)
T 2qc5_A 171 RITNT-G---KLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY-DIP-TPNARPHAITAGKNSEI 243 (300)
T ss_dssp EECTT-C---CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECS-STTCCEEEEEECSTTCE
T ss_pred EECCC-C---cEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE-ECC-CCCCCceEEEECCCCCE
Confidence 99862 1 2222333233345788999999998888877889999998 5554432 211 22345678999999998
Q ss_pred EEEEcCCCcEEEEECCCCceEE-EeecCCCCCcEEEECCCeeEEEEccceEEEeeec
Q 021669 243 VISGSGDGSVYAWSVRSGKEVA-SWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 243 l~s~s~Dg~i~vwd~~~~~~~~-~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~ 298 (309)
+++...++.|..||. +++... .+......+.++++.|++++.++.. . .++..+
T Consensus 244 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 244 WFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp EEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred EEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 888777899999998 444322 2233345688999999998877765 3 554433
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=1.8e-13 Score=130.76 Aligned_cols=273 Identities=8% Similarity=0.018 Sum_probs=172.0
Q ss_pred CCCCEEEEeeCCC---cEEEEEc--CCCceeeee------eccccceeEEEEecCCCEEEEEcCCCCC--ceeEEEEccC
Q 021669 21 KSSSYLVTASDDE---SIRLYDV--TAATCLKTI------NSKKYGVDLVCFTSHPTTVIYSSKNGWD--ESLRLLSLHD 87 (309)
Q Consensus 21 ~~~~~l~t~s~D~---~v~iWd~--~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~s~~g~d--~~i~~~d~~~ 87 (309)
|+|++++-...++ .-.||-. .+++....+ .++...+...+|+|+++.+++++..+-+ .+|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8888876554332 1245543 344332221 1233457789999999999877643222 3899999999
Q ss_pred CceEEEeeecccCEEEEEecCCCCeEEEecCCCc----------------EEEeeCCCceeeeee--eecC----ceeEE
Q 021669 88 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT----------------VLLWDQRAEKCQGLL--RVQG----RPAAA 145 (309)
Q Consensus 88 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~----------------v~~Wd~~~~~~~~~~--~~~~----~~~~~ 145 (309)
++.+.....+ ..+..++|+||++.|+.++.|+. |++|++.+++....+ .... .....
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 9876543322 23667999999999999888876 999999876532111 2111 22456
Q ss_pred ECCCCcEEEEE-E-----CCEEEEEECCC------CCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC----CcEEE
Q 021669 146 YDDQGLVFAVA-F-----GGYIRMFDARK------YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME----GHIHV 209 (309)
Q Consensus 146 ~~~~~~~~~~~-~-----~~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d----g~v~i 209 (309)
+++++..++.. . +..|.+||+.. ... ... .+..+...+.. .++|+|+.|+..+.. +.|.+
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~--~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWV--KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCE--EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceE--EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEE
Confidence 77887655544 3 46899999864 211 122 22223333333 589999888776653 36999
Q ss_pred EECCCCeE--eEEeeecCCCCCccceEEECCCCCEEEEEcCCC--cEEEEECCCCceEEEeecCCCCCcEEEECCCeeE-
Q 021669 210 LDSFRGTL--LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG--SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLM- 284 (309)
Q Consensus 210 ~d~~~~~~--~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg--~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~- 284 (309)
||+.++.. ...+..+ .....+..++|++++..+++...|+ .|++||+.+++.+..+..+.+.+..++++|++..
T Consensus 316 ~d~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l 394 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPE-HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEI 394 (710)
T ss_dssp EETTSCCGGGCEEEECC-CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEE
T ss_pred EeCCCCCcccceeccCC-CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEE
Confidence 99877641 2222211 1112455688988888999999898 4667787778777777767777888999998854
Q ss_pred EEEccc---eEEEeeecC
Q 021669 285 FVTGSS---ELSFWIPDL 299 (309)
Q Consensus 285 l~s~~~---d~~~~~~~~ 299 (309)
+++.++ ...+|.+++
T Consensus 395 ~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 395 FYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEEECSSCCCEEEEEET
T ss_pred EEEEeCCCCCCEEEEEEC
Confidence 444333 245555544
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=5e-13 Score=114.38 Aligned_cols=239 Identities=8% Similarity=0.067 Sum_probs=153.8
Q ss_pred CcceEEEEeCCCCCEEEE-------eeCCCcEEEEEcCCCceeeeee----ccccceeEEEEecCCCEEEEEcCCCCCce
Q 021669 11 NGRISSMDFHKSSSYLVT-------ASDDESIRLYDVTAATCLKTIN----SKKYGVDLVCFTSHPTTVIYSSKNGWDES 79 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t-------~s~D~~v~iWd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 79 (309)
-....+++|+++|+++++ +..++.|.+||..+++...... ++...+..+++.+++..++++.. ...
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---~~~ 93 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---RLG 93 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---TTE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---CCC
Confidence 345679999999998888 6788999999988776543221 13345778888888334444332 336
Q ss_pred eEEEEccCCceEEE-eee----cccCEEEEEecCCCCeEEEecCC---------------CcEEEeeCCCceeeeeeeec
Q 021669 80 LRLLSLHDNKYLRY-FKG----HHDRVVSLSLCSSKDCFISGSLD---------------RTVLLWDQRAEKCQGLLRVQ 139 (309)
Q Consensus 80 i~~~d~~~~~~~~~-~~~----h~~~v~~v~~~~~~~~l~s~s~D---------------g~v~~Wd~~~~~~~~~~~~~ 139 (309)
|.+||.+ ++.... ... +...+.++.+.++++..++...+ +.|..||.. ++...
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~----- 166 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ----- 166 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-----
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-----
Confidence 8899988 664433 221 12457899999999877776554 233333322 11100
Q ss_pred CceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEc----cCCCEE-EEEeCCCcEEEEECC-
Q 021669 140 GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS----NDGRLM-LLTTMEGHIHVLDSF- 213 (309)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s----~dg~~l-~~~~~dg~v~i~d~~- 213 (309)
... .......++++ |+|+.+ ++...++.|.+||..
T Consensus 167 ------------------------------------~~~---~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~ 207 (314)
T 1pjx_A 167 ------------------------------------VDT---AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG 207 (314)
T ss_dssp ------------------------------------EEE---EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE
T ss_pred ------------------------------------ecc---CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCC
Confidence 000 00123567888 999654 555678899999975
Q ss_pred CCeEeE--EeeecCCCC-CccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCee-EEEEcc
Q 021669 214 RGTLLS--TYNVKPVSR-NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS 289 (309)
Q Consensus 214 ~~~~~~--~~~~~~~~~-~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~-~l~s~~ 289 (309)
++.... .+...+.+. ..+..++++|+|+.+++...++.|.+||..+++.+..+..+...+.+++|+|+++ ++++..
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred CCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC
Confidence 444221 111111121 3456789999999999888889999999987777776666667789999999998 666665
Q ss_pred ce--EEEeeec
Q 021669 290 SE--LSFWIPD 298 (309)
Q Consensus 290 ~d--~~~~~~~ 298 (309)
.+ +..+.++
T Consensus 288 ~~~~l~~~~~~ 298 (314)
T 1pjx_A 288 ENNAVWKFEWQ 298 (314)
T ss_dssp TTTEEEEEECS
T ss_pred CCCeEEEEeCC
Confidence 53 4444443
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=5.6e-14 Score=134.95 Aligned_cols=245 Identities=14% Similarity=0.043 Sum_probs=153.2
Q ss_pred CCcceEEEEeCCCCCEEEEeeCC-----CcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCC--------
Q 021669 10 YNGRISSMDFHKSSSYLVTASDD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW-------- 76 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D-----~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~-------- 76 (309)
|+..+..++|||||++||.++.+ .+|++||+.+++.+.. ..+...+..++|+|+ +.+++++....
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44578899999999999887764 4699999999987653 112222357899999 98888764321
Q ss_pred ---CceeEEEEccCCce--EEEeee--cccCEEEEEecCCCCeEEEecCCC-----cEEEeeCCCc--eeeeeeeecC--
Q 021669 77 ---DESLRLLSLHDNKY--LRYFKG--HHDRVVSLSLCSSKDCFISGSLDR-----TVLLWDQRAE--KCQGLLRVQG-- 140 (309)
Q Consensus 77 ---d~~i~~~d~~~~~~--~~~~~~--h~~~v~~v~~~~~~~~l~s~s~Dg-----~v~~Wd~~~~--~~~~~~~~~~-- 140 (309)
...|++|++.+++. +..+.. |...+..+.|+|||++|+..+.++ .|.+||+.++ .+...+....
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 34589999977652 333333 334688999999999888777554 8999998765 3122222111
Q ss_pred ceeEEECCCCcEEEEEE----CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECC-CC
Q 021669 141 RPAAAYDDQGLVFAVAF----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RG 215 (309)
Q Consensus 141 ~~~~~~~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~-~~ 215 (309)
.......+.+.++..+. ...|.+||+.... ....... ......+..++++ ++.++++...|+..+||... ++
T Consensus 319 ~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 319 QWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVV-PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp CEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEE-CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS
T ss_pred eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEe-cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 11222222333444443 2469999976532 1111111 1222234456666 56778888888887776543 35
Q ss_pred eEeEEeeecCCCCCccceEEECCCCCEEE----EEcCCCcEEEEECCCCc
Q 021669 216 TLLSTYNVKPVSRNSTLEASFSPEGMFVI----SGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~sp~g~~l~----s~s~Dg~i~vwd~~~~~ 261 (309)
.....+... ....+..++++|+++.++ +....++|++||+.+++
T Consensus 396 ~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 396 KPAGAVSLP--GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CEEEECBCS--SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CceeeccCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 544444321 234566788999998766 33445799999998876
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=6e-13 Score=115.35 Aligned_cols=242 Identities=13% Similarity=0.156 Sum_probs=164.9
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEE
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~ 92 (309)
....+.+. ++++.++...+++|.+||..+++.+.++... .....+++++++ .++.+. .+++.|.++|.++++.+.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~-~~p~~i~~~~~g-~lyv~~--~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGF-TSPRYIHFLSDE-KAYVTQ--IWDYRIFIINPKTYEITG 119 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECC-SSEEEEEEEETT-EEEEEE--BSCSEEEEEETTTTEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCC-CCCcEEEEeCCC-eEEEEE--CCCCeEEEEECCCCeEEE
Confidence 35667775 3556677777899999999999998888543 346778888887 555543 237899999999998776
Q ss_pred Eeeecc-----cCEEEEEecCCCCeEEEec-CCCcEEEeeCCCceeeeeeeecCce-eEEECCCCcEEEEEEC-------
Q 021669 93 YFKGHH-----DRVVSLSLCSSKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQGRP-AAAYDDQGLVFAVAFG------- 158 (309)
Q Consensus 93 ~~~~h~-----~~v~~v~~~~~~~~l~s~s-~Dg~v~~Wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------- 158 (309)
.+.... .....+++ .+++.+++.. .+++|.++|+++++....+.....+ ...+++++.++.+..+
T Consensus 120 ~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred EEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCcc
Confidence 665332 14456666 4444445443 4899999999998877666554332 3566777776666543
Q ss_pred ----CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceE
Q 021669 159 ----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 234 (309)
Q Consensus 159 ----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
+.|.++|..+.+. .....+.. ......++++|+++.+..... .|.+||..+++....... .........+
T Consensus 199 ~~~~~~v~~id~~t~~v--~~~~~~~~-g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~-~~~~~~p~gi 272 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTV--EKQFKFKL-GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFL-EFRDTKYYGL 272 (328)
T ss_dssp CBCCCEEEEEETTTTEE--EEEEECCT-TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSB-CCCSSCEEEE
T ss_pred ccCCceEEEEECCCCeE--EEEEecCC-CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeee-cCCCCceEEE
Confidence 6899999865321 11122211 125688999999988877654 999999988775321111 1112456779
Q ss_pred EECC-CCCEEEEE----cCCCcEEEEECCCCceEEEee
Q 021669 235 SFSP-EGMFVISG----SGDGSVYAWSVRSGKEVASWM 267 (309)
Q Consensus 235 ~~sp-~g~~l~s~----s~Dg~i~vwd~~~~~~~~~~~ 267 (309)
+++| +++.+++. ..++.|.+||.. ++.+.++.
T Consensus 273 ~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 273 TVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 9999 56666666 678999999997 88887764
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.61 E-value=7.7e-12 Score=115.96 Aligned_cols=275 Identities=10% Similarity=0.095 Sum_probs=182.2
Q ss_pred cceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcC--CCceeeeeeccccceeEEEEe----cCCCEEEEEcCCCC
Q 021669 3 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFT----SHPTTVIYSSKNGW 76 (309)
Q Consensus 3 ~~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~s~~g~ 76 (309)
++.++.. ...+..+.|+|||+++.+++.|+.|.+||+. +++.+.++..... ...++|+ |++++++++.. +
T Consensus 189 v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~--~ 264 (567)
T 1qks_A 189 IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAY--W 264 (567)
T ss_dssp EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEE--E
T ss_pred EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEc--c
Confidence 3444443 2345689999999999999999999999996 7888877776443 4678999 69998887753 4
Q ss_pred CceeEEEEccCCceEEEeee----------ccc-CEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeee--cC-c
Q 021669 77 DESLRLLSLHDNKYLRYFKG----------HHD-RVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRV--QG-R 141 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~----------h~~-~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~--~~-~ 141 (309)
++++.++|..+.+.++.+.- |.. .+..+..++++. ++++...+|.|.++|....+....... .. .
T Consensus 265 ~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~ 344 (567)
T 1qks_A 265 PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFL 344 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSE
T ss_pred CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccc
Confidence 78999999999888877642 323 678888888755 556667789999999876543222211 11 1
Q ss_pred eeEEECCCCcEEEEEE--CCEEEEEECCCCCcCCceEEEe-CCCCCCCeEEE-EccCC-CEEEEEe-CCCcEEEEECCC-
Q 021669 142 PAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSV-GGDISDANVVK-FSNDG-RLMLLTT-MEGHIHVLDSFR- 214 (309)
Q Consensus 142 ~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~v~-~s~dg-~~l~~~~-~dg~v~i~d~~~- 214 (309)
....+++++.++.++. ++.|.++|+.+.+. ...... ........... ++|++ ..++++. .++.|.++|..+
T Consensus 345 ~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl--~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 345 HDGGLDGSHRYFITAANARNKLVVIDTKEGKL--VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred cCceECCCCCEEEEEeCCCCeEEEEECCCCcE--EEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 2345777777665543 58999999876431 122233 21111112222 58874 4445553 568999999877
Q ss_pred ------CeEeEEeeecCCCCCccceEEECCCCCEEEEEcC-------CCcEEEEECCCC-----ce-EEEee-----cC-
Q 021669 215 ------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG-------DGSVYAWSVRSG-----KE-VASWM-----SF- 269 (309)
Q Consensus 215 ------~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~-------Dg~i~vwd~~~~-----~~-~~~~~-----~~- 269 (309)
.+.+.++.... ....-+..+|+++++..... ..+|.|+|+.+. .. ...+. ..
T Consensus 423 ~~~~~~~kvv~~i~~~g---~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~ 499 (567)
T 1qks_A 423 GHPDNAWKILDSFPALG---GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGIT 499 (567)
T ss_dssp TCTTTBTSEEEEEECSC---SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCC
T ss_pred CCccccCEEEEEEecCC---CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccC
Confidence 45666655422 22234788999999998763 359999999876 21 12221 11
Q ss_pred --CCCCcEEEECCCeeEEE
Q 021669 270 --DTEPPVIKWTPGSLMFV 286 (309)
Q Consensus 270 --~~~v~~l~~~p~~~~l~ 286 (309)
...+..+.|+|+|+.+.
T Consensus 500 ~~~~~~~~~~~~~~G~~~~ 518 (567)
T 1qks_A 500 EGQPRVVQGEFNKDGTEVW 518 (567)
T ss_dssp SSCCEEEEEEECTTSSEEE
T ss_pred CCCcceEeeeECCCCCEEE
Confidence 34567899999997543
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.60 E-value=7.5e-13 Score=112.71 Aligned_cols=214 Identities=15% Similarity=0.159 Sum_probs=144.9
Q ss_pred ceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEE
Q 021669 44 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 123 (309)
Q Consensus 44 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~ 123 (309)
..++.+..+......++|.++++.++++.. .++.|..||..++ ...+..+...+.+++++++++.+++...++.|.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~--~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDV--RQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEG--GGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeC--CCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 334444444445678899999985555432 2678999999887 666777888899999999999888887789999
Q ss_pred EeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEE--
Q 021669 124 LWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT-- 201 (309)
Q Consensus 124 ~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~-- 201 (309)
+||.++++....... ..+ .....++.++++|+|+++++.
T Consensus 94 ~~d~~~g~~~~~~~~------------------~~~---------------------~~~~~~~~i~~d~~G~l~vtd~~ 134 (296)
T 3e5z_A 94 RQREPGGEWESIADS------------------FEG---------------------KKLNSPNDVCLAPDGSLWFSDPT 134 (296)
T ss_dssp EECSTTCCEEEEECE------------------ETT---------------------EECCCCCCEEECTTSCEEEEECS
T ss_pred EEcCCCCcEEEEeec------------------cCC---------------------CCCCCCCCEEECCCCCEEEECCc
Confidence 999876653221100 000 001234568899999988873
Q ss_pred --e-------------CCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECC-CCce---
Q 021669 202 --T-------------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKE--- 262 (309)
Q Consensus 202 --~-------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~-~~~~--- 262 (309)
+ ..+.|..+|.. ++... +. ........++|+|||+.+++.+.++.|++|++. +++.
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~---~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~ 209 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-PI---RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQ 209 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-EE---CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEE
T ss_pred cccccccccccccccCCCcEEEEECCC-CCEEE-ee---cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCC
Confidence 2 13467777765 44332 21 122344678999999999888889999999996 4543
Q ss_pred EEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecCCCcccc
Q 021669 263 VASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSKLGAY 305 (309)
Q Consensus 263 ~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~~~~~~~ 305 (309)
...+..+...+..++++|+|++.++....+.+|.++...+..+
T Consensus 210 ~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 210 GVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDGDELGRV 252 (296)
T ss_dssp EEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTSCEEEEE
T ss_pred CeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCCCEEEEE
Confidence 2233334556788999999998877755678888775544433
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=7.5e-12 Score=111.75 Aligned_cols=242 Identities=9% Similarity=0.035 Sum_probs=160.2
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEE
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~ 92 (309)
....|+|+|+++++++...++.|++||..++........... .. ++++++++.++++...+ ...|.+++...+....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~-~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEG-THTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSST-TCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCC-CceEEEEEcCCCceeE
Confidence 567899999999888888889999999988776655544333 33 89999998887775422 2278888887665444
Q ss_pred Ee----eecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCC
Q 021669 93 YF----KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARK 168 (309)
Q Consensus 93 ~~----~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 168 (309)
.+ ..+...+.+++++|++..|..+..++.|+.||..++... .+... +
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~------------------~---------- 259 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQL------------------E---------- 259 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEEC------------------C----------
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEecc------------------c----------
Confidence 44 224466788999995444555666889999998655321 11000 0
Q ss_pred CCcCCceEEEeCCCCCCCeEEEEcc-CCCEEEEEeCCCcEEEEECCCCeEeEEeeecC------------CCCCccceEE
Q 021669 169 YEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP------------VSRNSTLEAS 235 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~------------~~~~~~~~~~ 235 (309)
..+. .+ ..+.+.++++| ++.++++...++.|+.||.... .. .+.... ..-.....++
T Consensus 260 -~~g~------~~-~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~-~~~g~~~~~g~~dg~~~~~~~~~P~gia 329 (409)
T 3hrp_A 260 -LSGS------LG-TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CE-WFCGSATQKTVQDGLREEALFAQPNGMT 329 (409)
T ss_dssp -CCSC------CC-CSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EE-EEEECTTCCSCBCEEGGGCBCSSEEEEE
T ss_pred -ccCC------CC-CCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EE-EEEeCCCCCCcCCCcccccEeCCCeEEE
Confidence 0000 00 00112789999 5777777788899999987533 22 221111 0012356799
Q ss_pred ECCCCCEEEEEc-CCCcEEEEECCCCceEEEeecCC---------------CCCcEEEECCCeeEEEEccceEEEeee
Q 021669 236 FSPEGMFVISGS-GDGSVYAWSVRSGKEVASWMSFD---------------TEPPVIKWTPGSLMFVTGSSELSFWIP 297 (309)
Q Consensus 236 ~sp~g~~l~s~s-~Dg~i~vwd~~~~~~~~~~~~~~---------------~~v~~l~~~p~~~~l~s~~~d~~~~~~ 297 (309)
++|+|+.+++-+ .++.|+.|++.+++ +.++.++. ..+..|+++|++.++++-....+++..
T Consensus 330 ~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 330 VDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp ECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred EeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 999999888888 89999999987775 44444441 246779999999888887766555443
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.57 E-value=1.8e-12 Score=115.50 Aligned_cols=257 Identities=11% Similarity=0.104 Sum_probs=166.6
Q ss_pred EEEeCCCCCEEEEee----------CCCcEEEEEcCCCceeeeeecc-------ccceeEEEEecCCCEEEEEcCCCCCc
Q 021669 16 SMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCFTSHPTTVIYSSKNGWDE 78 (309)
Q Consensus 16 ~i~~s~~~~~l~t~s----------~D~~v~iWd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~s~~g~d~ 78 (309)
.+.++|||++|..+. .+++|.++|..+++.+.++... ......+++++++++++.+... .++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-~~~ 200 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-PAP 200 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-SSC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-CCC
Confidence 799999999887765 3679999999999988887532 1224568999999998887531 257
Q ss_pred eeEEEEccCCceEEEeeecccCEEEEEecCCC-CeEEEecCCCcEEEeeCCCceeee----eeeecCce---eEEECCC-
Q 021669 79 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQG----LLRVQGRP---AAAYDDQ- 149 (309)
Q Consensus 79 ~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~Dg~v~~Wd~~~~~~~~----~~~~~~~~---~~~~~~~- 149 (309)
.|.+.|+.+++.+..+.--. . ....|++ +.+++.+.||++.+.+..+++... .+.....+ ...+.++
T Consensus 201 ~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 201 AVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp EEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred eEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 89999999998877765311 1 2233433 456677778888777775554331 11111111 1223433
Q ss_pred CcEEEEEECCEEEEEECCCCCcCCceEEEeCC--------CCCCCeEEEEccCCCEEEEEeC----------CCcEEEEE
Q 021669 150 GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLLTTM----------EGHIHVLD 211 (309)
Q Consensus 150 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~v~~s~dg~~l~~~~~----------dg~v~i~d 211 (309)
+.++.....+.+.+.|...........+.+.. .......++++||++.+..... .+.|.++|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 34455556788888887532110000011100 0112234689999876555432 35799999
Q ss_pred CCCCeEeEEeeecCCCCCccceEEECCCCC-EEEEEc-CCCcEEEEECCCCceEEEeecCCCCCcEEEECCCe
Q 021669 212 SFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS 282 (309)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~-~l~s~s-~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~ 282 (309)
..+.+.+.++... .....++|+|||+ +++++. .++.|.|+|+.+++.++++..-. .-+.+..+||.
T Consensus 357 ~~T~kvv~~I~vg----~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG-~~P~~i~~~~~ 424 (426)
T 3c75_H 357 AETGERINKIELG----HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLG-RGPQIITTHDM 424 (426)
T ss_dssp TTTCCEEEEEEEE----EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCS-SSCCEEECCCC
T ss_pred CCCCeEEEEEECC----CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCC-CCCcEEEcCCC
Confidence 9999999887642 2356799999999 888887 59999999999999998873222 33446666653
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.56 E-value=2.1e-12 Score=113.34 Aligned_cols=275 Identities=11% Similarity=0.027 Sum_probs=179.9
Q ss_pred EEeCCCCCEEEEeeC-----CCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC-------CCCceeEEEE
Q 021669 17 MDFHKSSSYLVTASD-----DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLS 84 (309)
Q Consensus 17 i~~s~~~~~l~t~s~-----D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~i~~~d 84 (309)
+...|+++++..... +++|.+.|..+++.+.++.....+ . ++++|+++.++.+... ..++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 445789988766654 789999999999999998876655 4 9999999988776420 1256799999
Q ss_pred ccCCceEEEeeecc-------cCEEEEEecCCCCeEEEecC--CCcEEEeeCCCceeeeeeeecCceeEEEC-CCCcEEE
Q 021669 85 LHDNKYLRYFKGHH-------DRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYD-DQGLVFA 154 (309)
Q Consensus 85 ~~~~~~~~~~~~h~-------~~v~~v~~~~~~~~l~s~s~--Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 154 (309)
..+.+.+..+.-.. .....+.|+|||+++..+.. +++|.++|+++.+....+...+.. ..+. ....+++
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~-~~~P~g~~~~~~ 194 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCY-HIFPTAPDTFFM 194 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE-EEEEEETTEEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcc-eeecCCCceeEE
Confidence 99999887764221 24567899999998877753 689999999999988888765532 2222 2334556
Q ss_pred EEECCEEEEEECCCCCcCCceEEE--eCCCCCCC-eEEEE-ccCCCEEEEEeCCCcEEEEECCCCe--EeEEeeec----
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFS--VGGDISDA-NVVKF-SNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVK---- 224 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~-~~v~~-s~dg~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~---- 224 (309)
.+.||.+.+.++.....- ..... .......+ ....| .++|+++. .+.+|+|+++|..++. .+..+...
T Consensus 195 ~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred ECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccc
Confidence 677888888877541111 01000 00001111 11245 46886544 5668999999986553 33332210
Q ss_pred ---CCCCCccceEEECCCCCEEEEEcC----------CCcEEEEECCCCceEEEeecCCCCCcEEEECCCee-EE-EEcc
Q 021669 225 ---PVSRNSTLEASFSPEGMFVISGSG----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MF-VTGS 289 (309)
Q Consensus 225 ---~~~~~~~~~~~~sp~g~~l~s~s~----------Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~-~l-~s~~ 289 (309)
.........++++|+++.++.+-. ...|.+.|+.+++.++.+.. ...+..|+++||++ +| ++..
T Consensus 273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEET
T ss_pred ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcC
Confidence 000112234788999988888642 25799999999999888753 23578999999986 44 4333
Q ss_pred --ceEEEeee
Q 021669 290 --SELSFWIP 297 (309)
Q Consensus 290 --~d~~~~~~ 297 (309)
.++.++..
T Consensus 352 ~~~~VsViD~ 361 (386)
T 3sjl_D 352 GDKTLYIHDA 361 (386)
T ss_dssp TTTEEEEEET
T ss_pred CCCeEEEEEC
Confidence 34555544
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=2e-11 Score=104.17 Aligned_cols=235 Identities=12% Similarity=0.105 Sum_probs=150.5
Q ss_pred eEecCCCcceEEEEeCCC-CCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEE
Q 021669 5 MSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 83 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~-~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~ 83 (309)
..+..+..--.+..|+|+ +.++++...++.|..||..+++. ..+. ....+..+++.++++.++ +. +..|.+|
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v-~~----~~~l~~~ 78 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVA-TI----GTKFCAL 78 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEE-EE----TTEEEEE
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEE-EE----CCeEEEE
Confidence 334444455668899995 55677777899999999987754 2232 234578899999998444 33 4579999
Q ss_pred EccCCceEEEeee----cccCEEEEEecCCCCeEEEecCCC---------cEEEeeCCCceeeeeeeecCceeEEECCCC
Q 021669 84 SLHDNKYLRYFKG----HHDRVVSLSLCSSKDCFISGSLDR---------TVLLWDQRAEKCQGLLRVQGRPAAAYDDQG 150 (309)
Q Consensus 84 d~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~s~Dg---------~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~ 150 (309)
|.++++....... ....++.+.+.|+|++.++...+. .-.+|.+. +++
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d-------------------~~g 139 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF-------------------PDH 139 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC-------------------TTS
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE-------------------CCC
Confidence 9988764433221 124578899999998666543221 11121111 111
Q ss_pred cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEE-EEEeCCCcEEEEEC--CCCeEeE--EeeecC
Q 021669 151 LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDS--FRGTLLS--TYNVKP 225 (309)
Q Consensus 151 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l-~~~~~dg~v~i~d~--~~~~~~~--~~~~~~ 225 (309)
.+. .+.+ .....+.++++||++.+ ++.+.++.|.+||. .++.+.. .+....
T Consensus 140 ~~~--------~~~~----------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~ 195 (297)
T 3g4e_A 140 HVK--------KYFD----------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE 195 (297)
T ss_dssp CEE--------EEEE----------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC
T ss_pred CEE--------EEee----------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC
Confidence 100 0000 00123678999999865 55667889999986 4555421 121111
Q ss_pred CCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEEC-CCee-EEEEcc
Q 021669 226 VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-PGSL-MFVTGS 289 (309)
Q Consensus 226 ~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~-p~~~-~l~s~~ 289 (309)
.....+..+++.++|+.+++...++.|.+||..+++.+..+......+++++|. |+++ ++++..
T Consensus 196 ~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 196 KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 112345678999999988888888899999999899888887766788999998 8765 445543
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.54 E-value=1.4e-12 Score=124.26 Aligned_cols=270 Identities=9% Similarity=0.034 Sum_probs=164.1
Q ss_pred CCCCCEEEEeeCCC---cEEEEEc--CCCceeeeee------ccccceeEEEEecCCCEEEEEcCC-C-CCceeEEEEcc
Q 021669 20 HKSSSYLVTASDDE---SIRLYDV--TAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSKN-G-WDESLRLLSLH 86 (309)
Q Consensus 20 s~~~~~l~t~s~D~---~v~iWd~--~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~s~~-g-~d~~i~~~d~~ 86 (309)
+|+|++++-...++ .-.||-. ..++....+. +|...+..++|+|+++.++++... | .+.+|++||++
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47899887777655 3566643 3444333322 334467889999999998876532 2 24799999999
Q ss_pred CCceEEEeeecccCE--EEEEecCCCCeEEEecCCCc-------------EEEeeCCCceeee--eeeec----CceeEE
Q 021669 87 DNKYLRYFKGHHDRV--VSLSLCSSKDCFISGSLDRT-------------VLLWDQRAEKCQG--LLRVQ----GRPAAA 145 (309)
Q Consensus 87 ~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~s~Dg~-------------v~~Wd~~~~~~~~--~~~~~----~~~~~~ 145 (309)
+++.+. ..+...+ ..++|+|||+.|+.++.|.. |++|++.++.... ..... ......
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 988641 1122233 67899999999999998877 9999998765321 11211 123456
Q ss_pred ECCCCcEEE-EEECC----EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEe---CCCcEEEEECCCCeE
Q 021669 146 YDDQGLVFA-VAFGG----YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT---MEGHIHVLDSFRGTL 217 (309)
Q Consensus 146 ~~~~~~~~~-~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~---~dg~v~i~d~~~~~~ 217 (309)
+++++..++ ...++ .|.+++... +....+.. .........+ ++|.+++... .++.|.+||+.++..
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~---~~~~~l~~--~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~ 307 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGE---KDFRLLVK--GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR 307 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTC---SSCEEEEE--CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCC---CceEEeec--CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc
Confidence 777776444 34343 566665432 12222222 2233444444 6777444433 257899999877642
Q ss_pred --eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECC-CCceEEEeecC-CCCCcEEEECCCeeEEE-Ecc---
Q 021669 218 --LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKEVASWMSF-DTEPPVIKWTPGSLMFV-TGS--- 289 (309)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~-~~~~~~~~~~~-~~~v~~l~~~p~~~~l~-s~~--- 289 (309)
...+.. ......+..++|+ +++.+++...|+..+||.+. +++....+..+ .+.+..++++|+++.++ +.+
T Consensus 308 ~~~~~l~~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 385 (695)
T 2bkl_A 308 ASWKEIVP-EDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFT 385 (695)
T ss_dssp GGCEEEEC-CCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETT
T ss_pred cCCeEEec-CCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 122211 1112345567887 77889999999988888664 45555555444 55677788999886554 332
Q ss_pred ceEEEeeecC
Q 021669 290 SELSFWIPDL 299 (309)
Q Consensus 290 ~d~~~~~~~~ 299 (309)
....+|.+++
T Consensus 386 ~P~~v~~~d~ 395 (695)
T 2bkl_A 386 TPRQIYKTSV 395 (695)
T ss_dssp EEEEEEEEET
T ss_pred CCCEEEEEEC
Confidence 2355555544
No 204
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.54 E-value=6.7e-13 Score=116.35 Aligned_cols=262 Identities=10% Similarity=-0.003 Sum_probs=165.3
Q ss_pred ccceEecCCCcceEEEEeCCCCCEEEEee----------CCCcEEEEEcCCCceeeeeeccc-------cceeEEEEecC
Q 021669 2 EVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSKK-------YGVDLVCFTSH 64 (309)
Q Consensus 2 ~~~~~~~~h~~~V~~i~~s~~~~~l~t~s----------~D~~v~iWd~~~~~~~~~~~~~~-------~~v~~~~~~~~ 64 (309)
+++.++..-..+ .+.++||++++..+. .|++|.+||..+++.+.++.... .....++++|+
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD 134 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC
Confidence 344455432334 799999999887775 37899999999999999886431 22457899999
Q ss_pred CCEEEEEcCCCCCceeEE--EEccCCceEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCC-----ceeee--
Q 021669 65 PTTVIYSSKNGWDESLRL--LSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRA-----EKCQG-- 134 (309)
Q Consensus 65 ~~~~~~~s~~g~d~~i~~--~d~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~-----~~~~~-- 134 (309)
+++++.+... -+..+.+ +|..+ ++.+.- .+ . ..+.|+++ .+++.+.|+++.+.|+++ ++...
T Consensus 135 Gk~lyVan~~-~~~~v~V~~iD~~t---v~~i~v-~~-~--~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~ 206 (368)
T 1mda_H 135 SACLLFFLFG-SSAAAGLSVPGASD---DQLTKS-AS-C--FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQC 206 (368)
T ss_dssp SSCEEEEECS-SSCEEEEEETTTEE---EEEEEC-SS-C--CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCS
T ss_pred CCEEEEEccC-CCCeEEEEEEchhh---ceEEEC-CC-c--eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEe
Confidence 9998887532 1456888 88876 333321 01 1 12335443 556677888888888876 33221
Q ss_pred --eeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeC-------C-CCCCCeEEEEccCCCEEEEEeC-
Q 021669 135 --LLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG-------G-DISDANVVKFSNDGRLMLLTTM- 203 (309)
Q Consensus 135 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~-~~~~~~~v~~s~dg~~l~~~~~- 203 (309)
.+.....+. ...+.+.++.... +.+.+.|.............+. + .......++++||++.+..+..
T Consensus 207 t~~i~vg~~P~-~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~ 284 (368)
T 1mda_H 207 TGAQNCSSQAA-QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVE 284 (368)
T ss_dssp CTTSCBCSCCE-EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred eeeeeCCCCcc-ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecc
Confidence 122222233 2444455555555 8888888753211000000000 0 0011223689999987765432
Q ss_pred --------CCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCC-EEEEEc-CCCcEEEEECCCCceEEEeecCCCCC
Q 021669 204 --------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVYAWSVRSGKEVASWMSFDTEP 273 (309)
Q Consensus 204 --------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~-~l~s~s-~Dg~i~vwd~~~~~~~~~~~~~~~~v 273 (309)
++.+.++|+.+++.+.++... .....++|+|||+ .+++.. .++.|.|+|+.+++.++++.... ..
T Consensus 285 ~~~~~~~~~~~~~ViD~~t~~vv~~i~vg----~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~-~P 359 (368)
T 1mda_H 285 HSRSCLAAAENTSSVTASVGQTSGPISNG----HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK-GP 359 (368)
T ss_dssp CSSCTTSCEEEEEEEESSSCCEEECCEEE----EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS-CC
T ss_pred ccCcccccCCCEEEEECCCCeEEEEEECC----CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC-CC
Confidence 235679999999988876542 2456799999998 455666 59999999999999998886543 45
Q ss_pred cEEEECC
Q 021669 274 PVIKWTP 280 (309)
Q Consensus 274 ~~l~~~p 280 (309)
..+++++
T Consensus 360 ~~i~~~~ 366 (368)
T 1mda_H 360 ESLSVQN 366 (368)
T ss_dssp CEEECCC
T ss_pred CEEEeec
Confidence 6666654
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=5.4e-12 Score=112.46 Aligned_cols=273 Identities=9% Similarity=0.007 Sum_probs=177.0
Q ss_pred CCCCEE-EEeeCC----CcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC-------CCCceeEEEEccCC
Q 021669 21 KSSSYL-VTASDD----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDN 88 (309)
Q Consensus 21 ~~~~~l-~t~s~D----~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~i~~~d~~~~ 88 (309)
|+++++ ++...+ ++|.+.|..+++.+.++.....+ .++++|+++.++.+... ..++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 456654 444433 79999999999999999876665 78999999988877521 12568999999999
Q ss_pred ceEEEeeec-------ccCEEEEEecCCCCeEEEecC--CCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECC
Q 021669 89 KYLRYFKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG 159 (309)
Q Consensus 89 ~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (309)
+.+..+.-- ......+.|+||++++..+.. +++|.+.|+.+.+....+.+.+...........+++...||
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 988776421 123457899999998888764 57899999999988877766443112222233455555677
Q ss_pred EEEEEECCCCCcCCc--eEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEe--EEeeecC---C----CC
Q 021669 160 YIRMFDARKYEKGPF--DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL--STYNVKP---V----SR 228 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~--~~~~~~~---~----~~ 228 (309)
.+.+.+....+.... ..+..... .-...+.+++++..++.....++|.+.|....... .++.... . ..
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~-p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDE-LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTS-CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CEEEEECCCCcEEEEeeeeeccCCC-ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 777666622110000 00111100 00123467999988888788899999998654422 1221100 0 00
Q ss_pred CccceEEECCCCCEEEEEcC----------CCcEEEEECCCCceEEEeecCCCCCcEEEECCCee-EEEEccc-e--EEE
Q 021669 229 NSTLEASFSPEGMFVISGSG----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGSS-E--LSF 294 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~----------Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~-~l~s~~~-d--~~~ 294 (309)
.....++++||+++++.... ++.|.+.|+.+.+.++++.. ......++|+||++ ++.+... + +.+
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 11123789999987777632 35799999999999988753 23578999999998 6666553 4 544
Q ss_pred eee
Q 021669 295 WIP 297 (309)
Q Consensus 295 ~~~ 297 (309)
...
T Consensus 398 ID~ 400 (426)
T 3c75_H 398 YDA 400 (426)
T ss_dssp EET
T ss_pred EEC
Confidence 443
No 206
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=5.5e-12 Score=106.59 Aligned_cols=173 Identities=9% Similarity=0.052 Sum_probs=129.4
Q ss_pred CCceeEEEEccCCceEEEeeecc-cCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEE
Q 021669 76 WDESLRLLSLHDNKYLRYFKGHH-DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 154 (309)
Q Consensus 76 ~d~~i~~~d~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (309)
.|+.|.+||.++|+.++.+..+. ..+.++.+.|+|+.+++ .++.|..||. +++.+..+...
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~--------------- 74 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAP--------------- 74 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECC---------------
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCC---------------
Confidence 38899999999999999998876 57899999999998883 4778999987 56543332210
Q ss_pred EEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC-CCcEEEEECCCCeEeEEeeecCC---CCCc
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPV---SRNS 230 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~-dg~v~i~d~~~~~~~~~~~~~~~---~~~~ 230 (309)
....+.++.+.|||+++++.+. ++.|..+|. +|+.+.++..... +...
T Consensus 75 ---------------------------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~ 126 (276)
T 3no2_A 75 ---------------------------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQ 126 (276)
T ss_dssp ---------------------------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGS
T ss_pred ---------------------------CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccc
Confidence 0012345678899999998887 888888886 6787776654211 1123
Q ss_pred cceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEee
Q 021669 231 TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWI 296 (309)
Q Consensus 231 ~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~ 296 (309)
...+++.++|+++++.+.++.|.+||.. ++.+.++... ..+..+...|+++.++++..+.++..
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~ 190 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQ 190 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEE
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEE
Confidence 4456889999999999999999999997 9988887654 35667888999998887776534433
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.51 E-value=5.2e-12 Score=120.38 Aligned_cols=245 Identities=13% Similarity=0.105 Sum_probs=153.1
Q ss_pred CCCcceEEEEeCCCCCEEE-----EeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC---------
Q 021669 9 DYNGRISSMDFHKSSSYLV-----TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN--------- 74 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~-----t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--------- 74 (309)
+|...+..++|||||++|| +|+.+.+|++||+.+|+.+... .+......++|+ |++.+++++..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 4566788999999999988 4444578999999999865431 111113567899 99999888754
Q ss_pred -CCCceeEEEEccCCce--EEEe--ee-cccCEEEEEecCCCCeEEE-ec---CCCcEEEeeCCCce-eeeeeeecC--c
Q 021669 75 -GWDESLRLLSLHDNKY--LRYF--KG-HHDRVVSLSLCSSKDCFIS-GS---LDRTVLLWDQRAEK-CQGLLRVQG--R 141 (309)
Q Consensus 75 -g~d~~i~~~d~~~~~~--~~~~--~~-h~~~v~~v~~~~~~~~l~s-~s---~Dg~v~~Wd~~~~~-~~~~~~~~~--~ 141 (309)
+....|++|++.++.. +..+ .. |.....++.++||+++|+- .+ .+..+.+||+.++. ....+.... .
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 2235699999877542 3333 33 5556788999999997643 32 23589999987653 122222111 1
Q ss_pred eeEEECCCCcEEEEEE----CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCC---cEEEEECCC
Q 021669 142 PAAAYDDQGLVFAVAF----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG---HIHVLDSFR 214 (309)
Q Consensus 142 ~~~~~~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg---~v~i~d~~~ 214 (309)
......+.+.++..+. .+.|..+|+..........+. .+...+. .++++++.|+....++ .|++||+..
T Consensus 284 ~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 1122223344444443 257889998764322222222 2333443 8999999887766544 688999874
Q ss_pred CeEeEEeeecCCCCCccceEEECCCCCEEEEEcCC----CcEEEEECCCCce
Q 021669 215 GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD----GSVYAWSVRSGKE 262 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D----g~i~vwd~~~~~~ 262 (309)
+. ...+... ....+..+.++|+++.++....+ ++++.||+.+++.
T Consensus 360 ~~-~~~l~~p--~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 360 KR-VREVALP--GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CE-EEEECCS--SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred Ce-eEEeecC--CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 43 3333221 22344556778888777665444 7899999987753
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.48 E-value=1.6e-11 Score=117.85 Aligned_cols=272 Identities=12% Similarity=0.091 Sum_probs=163.6
Q ss_pred CCCCCEEEEeeCCCc---EEEEEcC-----CCceeeee------eccccceeEEEEecCCCEEEEEcCCCCC--ceeEEE
Q 021669 20 HKSSSYLVTASDDES---IRLYDVT-----AATCLKTI------NSKKYGVDLVCFTSHPTTVIYSSKNGWD--ESLRLL 83 (309)
Q Consensus 20 s~~~~~l~t~s~D~~---v~iWd~~-----~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~s~~g~d--~~i~~~ 83 (309)
+|+|++++-...++. -.||-.. .++....+ .++...+...+|+|+++.+++++..+-+ .+|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489998887776554 6777543 33322221 2223357788999999999887643222 579999
Q ss_pred EccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCc--------------EEEeeCCCceeee--eeeecC----cee
Q 021669 84 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT--------------VLLWDQRAEKCQG--LLRVQG----RPA 143 (309)
Q Consensus 84 d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~--------------v~~Wd~~~~~~~~--~~~~~~----~~~ 143 (309)
|+++++.+.. ..+...+..++|+|| +.|+.++.|+. |.+|++.++.... ...... ...
T Consensus 195 dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 9999987543 112222357899999 98888877665 8899987665321 112111 234
Q ss_pred EEECCCCcEEEE-EEC-----CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC----CCcEEEEECC
Q 021669 144 AAYDDQGLVFAV-AFG-----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSF 213 (309)
Q Consensus 144 ~~~~~~~~~~~~-~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~----dg~v~i~d~~ 213 (309)
..+++++..++. ..+ ..|.+||+..........+. ......... ++|+|+.|+..+. ++.|.+||+.
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 567788865544 333 38999998653111022222 222233333 4689998888775 3459999987
Q ss_pred CCe-EeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECC-CCceEEEeec-CCCCCcEEEECCCeeEEE-Ecc
Q 021669 214 RGT-LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKEVASWMS-FDTEPPVIKWTPGSLMFV-TGS 289 (309)
Q Consensus 214 ~~~-~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~-~~~~~~~~~~-~~~~v~~l~~~p~~~~l~-s~~ 289 (309)
++. ....+. +.+...+..++++ ++..+++...|+..+||.+. +++....+.. ..+.+..++++|+++.++ +.+
T Consensus 350 ~~~~~~~~l~--~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 350 GSTPRFDTVV--PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp SSSCEEEEEE--CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred CCccccEEEe--cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 742 222222 1223334456776 66788888999987777654 4555555543 355678899999886444 332
Q ss_pred ---ceEEEeeecC
Q 021669 290 ---SELSFWIPDL 299 (309)
Q Consensus 290 ---~d~~~~~~~~ 299 (309)
....+|.+++
T Consensus 427 s~~~P~~i~~~d~ 439 (741)
T 1yr2_A 427 SFTQPATVLALDP 439 (741)
T ss_dssp ETTEEEEEEEEET
T ss_pred CCCCCCEEEEEEC
Confidence 2355555554
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=4.5e-10 Score=94.87 Aligned_cols=235 Identities=8% Similarity=0.073 Sum_probs=157.0
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee--ccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 87 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~ 87 (309)
+...+.++.++++|.+.++...++.|..||.. ++. ..+. .....+..+++.+++...++... ++.+..||. +
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~-~ 128 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITD-D 128 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT-T
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECC-C
Confidence 45678899999999998888778999999976 332 2222 23335677888887765544332 568999998 5
Q ss_pred CceEEE-eeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeee-eeec--CceeEEECCCCcEEEEEE-CCEEE
Q 021669 88 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL-LRVQ--GRPAAAYDDQGLVFAVAF-GGYIR 162 (309)
Q Consensus 88 ~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~-~~~i~ 162 (309)
++.... ...+...+.++++.++++..++...++.|..||. +++.... .... ......+++++.++.+.. ++.|.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 544322 2334567899999999988887777889999998 5544322 1111 122455666677665553 67899
Q ss_pred EEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCE
Q 021669 163 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 242 (309)
Q Consensus 163 ~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 242 (309)
.||. .. .+..+........+..++++++|+++++...++.|..||. ++.. ..+... .....+..+++ ++|+.
T Consensus 208 ~~~~-~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~-~~~~~~~~i~~-~~g~l 279 (299)
T 2z2n_A 208 RITT-SG---EITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQ-IKSAEPHGICF-DGETI 279 (299)
T ss_dssp EECT-TC---CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEECS-SSSCCEEEEEE-CSSCE
T ss_pred EECC-CC---cEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeCC-CCCCccceEEe-cCCCE
Confidence 9987 32 2223333333456788999999998887778899999998 4543 333322 22345677888 99988
Q ss_pred EEEEcCCCcEEEEECCCC
Q 021669 243 VISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 243 l~s~s~Dg~i~vwd~~~~ 260 (309)
+++.+ .+.+..++..+.
T Consensus 280 ~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 280 WFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEET-TTEEEEEEEC--
T ss_pred EEEec-CCcEEEEEcCcc
Confidence 88776 566888887654
No 210
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.47 E-value=1e-11 Score=103.83 Aligned_cols=200 Identities=8% Similarity=0.031 Sum_probs=137.8
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee-ccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 90 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~ 90 (309)
..+.+++++++|+++++.. ++.|.+||..+... ..+. .....+..+++.+++...++... ++.|.+|+..+...
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQ 141 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECC---CCEEEEEECCCcee
Confidence 4678899999999777776 88999999875543 2232 22235678889888874444332 56888897655443
Q ss_pred EEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCC
Q 021669 91 LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYE 170 (309)
Q Consensus 91 ~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 170 (309)
..........+.++++.++++.+++...++.|.+||..........
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~---------------------------------- 187 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP---------------------------------- 187 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC----------------------------------
T ss_pred EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec----------------------------------
Confidence 3322333456788999999988888777889999987544221000
Q ss_pred cCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCC
Q 021669 171 KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 250 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg 250 (309)
.........++++++|.++++...++.|.+||........ .. ......+..++++|+|+.+++...++
T Consensus 188 ---------~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~--~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 188 ---------FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP--FTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp ---------CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC--CCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred ---------ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec--cCCCCCceeEEECCCCCEEEEECCCC
Confidence 0001234678999999888888889999999986543322 11 11224567899999999999999999
Q ss_pred cEEEEECCCCce
Q 021669 251 SVYAWSVRSGKE 262 (309)
Q Consensus 251 ~i~vwd~~~~~~ 262 (309)
.|++++....+.
T Consensus 256 ~v~~~~~~~~~~ 267 (270)
T 1rwi_B 256 RVVKLTSLEHHH 267 (270)
T ss_dssp EEEEECCCGGGS
T ss_pred EEEEEcCCCccc
Confidence 999999976543
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=1.7e-10 Score=98.60 Aligned_cols=246 Identities=9% Similarity=0.060 Sum_probs=139.4
Q ss_pred EecCCCcceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEE
Q 021669 6 SFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 84 (309)
Q Consensus 6 ~~~~h~~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d 84 (309)
.+..+........|+|+|+ ++++...++.|..|+. +++ ...+......+..+++.++++.+++... ++.|.+|+
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~---~~~v~~~~ 113 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHG---RRAITRSD 113 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETT---TTEEEEEC
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECC---CCEEEEEC
Confidence 3444455667899999998 6778888899999998 444 3444444455778899998875444321 46788998
Q ss_pred ccCCceEEEeeec-----ccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECC
Q 021669 85 LHDNKYLRYFKGH-----HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG 159 (309)
Q Consensus 85 ~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (309)
.. ++.. .+..+ ...++.+.+.++|+..+|-..-|+..-++-... .... ..+
T Consensus 114 ~~-g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~-------~~~~---------------~~~ 169 (305)
T 3dr2_A 114 AD-GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA-------DPEL---------------AHH 169 (305)
T ss_dssp TT-SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC-------CCSS---------------SCE
T ss_pred CC-CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc-------cccc---------------CCC
Confidence 76 5432 22211 134567888888887776211011000000000 0000 001
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC------CcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d------g~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
.|..+|.... .+.... .....+.++|+|||+.|..+... +.|++||...+.+................
T Consensus 170 ~v~~~d~~~g---~~~~~~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 170 SVYRLPPDGS---PLQRMA---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp EEEEECSSSC---CCEEEE---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred eEEEEcCCCC---cEEEEe---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 1222222111 011110 11224678999999977666554 78999998765421111111111233456
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEE-EEccc
Q 021669 234 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF-VTGSS 290 (309)
Q Consensus 234 ~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l-~s~~~ 290 (309)
+++.++|+.+++. .++ |.+|+. +++.+..+.... .+..++|+|+++.| +++..
T Consensus 244 i~~d~~G~lwv~~-~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 244 FCVDRGGWLWSSS-GTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEECTTSCEEECC-SSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETT
T ss_pred EEECCCCCEEEec-CCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC
Confidence 8999999955444 454 999998 567777665544 68999999987644 44443
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=1.3e-11 Score=107.54 Aligned_cols=257 Identities=9% Similarity=0.014 Sum_probs=153.9
Q ss_pred cceEEEEeCCCCCEEEEee--CCCcEEEEEcCCCceeeeee-------ccccceeEEEEecCCCEEEEEcCCC---CCce
Q 021669 12 GRISSMDFHKSSSYLVTAS--DDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSHPTTVIYSSKNG---WDES 79 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s--~D~~v~iWd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~s~~g---~d~~ 79 (309)
..+..|+++|+|+++++.. .++.++||.+.+++. ..+. .+-..+..+++.+++. ++++..+. .+..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCe
Confidence 6788999999999999864 234367777655543 2221 2234577888888865 33332110 1468
Q ss_pred eEEEEccCCceEEEeeec------ccCEEEEEecCCC-CeEEEec---CCCcEEEeeCCCceeeeeeeec-C-ce-eEEE
Q 021669 80 LRLLSLHDNKYLRYFKGH------HDRVVSLSLCSSK-DCFISGS---LDRTVLLWDQRAEKCQGLLRVQ-G-RP-AAAY 146 (309)
Q Consensus 80 i~~~d~~~~~~~~~~~~h------~~~v~~v~~~~~~-~~l~s~s---~Dg~v~~Wd~~~~~~~~~~~~~-~-~~-~~~~ 146 (309)
|.+||+++++.++.+... ...+..+++.+++ ...++-+ .++.|.+||+.+++....+..+ . .. ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999998877666532 2356889999764 4456665 6889999999877654433210 0 00 0000
Q ss_pred CCCCcEEEE-EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCC-cEEEEECC---CCeE----
Q 021669 147 DDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-HIHVLDSF---RGTL---- 217 (309)
Q Consensus 147 ~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg-~v~i~d~~---~~~~---- 217 (309)
..++..+.. ..++.++.|. ...+.+++||||+.|..+..++ .+..++.. .+..
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~ 236 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPH------------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAE 236 (343)
T ss_dssp EETTEECBEECTTSCEECCC------------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHH
T ss_pred eECCEEEEeccCCCceecee------------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhh
Confidence 011211111 1122222221 1356799999998877776655 56555531 1110
Q ss_pred -eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecC--CCCCcEEEECCCeeEEEEccc
Q 021669 218 -LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF--DTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~--~~~v~~l~~~p~~~~l~s~~~ 290 (309)
...+... ........++++++|+.+++...++.|.+||..+++. ..+... -..+..++|.|+++++++.+.
T Consensus 237 ~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 237 LGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp HHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred hhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE-EEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 0000000 0112334689999999999999999999999956653 333222 345788999999988877663
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=1.1e-11 Score=108.96 Aligned_cols=174 Identities=16% Similarity=0.192 Sum_probs=129.4
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc---------eee-eeeccccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAAT---------CLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
.++.+++++...++++|+.| .+++|++.... ... ....... |..++| ++..++++ . ++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~---~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-T---RNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-E---SSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-c---CCcEEE
Confidence 58899999999999999998 55679876443 111 1223444 889999 77888777 2 678999
Q ss_pred EEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEE
Q 021669 83 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIR 162 (309)
Q Consensus 83 ~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (309)
||+.+.........|...+.++.+.+. .++.++.||++.+||+++++....
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~--------------------------- 161 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL--------------------------- 161 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE---------------------------
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccc---------------------------
Confidence 999877666677788888888777654 388889999999999876543210
Q ss_pred EEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeE--eEEeeecC------CCCCccceE
Q 021669 163 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL--LSTYNVKP------VSRNSTLEA 234 (309)
Q Consensus 163 ~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~--~~~~~~~~------~~~~~~~~~ 234 (309)
...+.++++||+| ++.+..||++++|+...+.. ..++...+ .+...+.++
T Consensus 162 --------------------~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI 219 (388)
T 1xip_A 162 --------------------AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSV 219 (388)
T ss_dssp --------------------EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEE
T ss_pred --------------------cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEE
Confidence 0246899999999 67899999999999877765 44442111 134678899
Q ss_pred EECCCCCEEEE
Q 021669 235 SFSPEGMFVIS 245 (309)
Q Consensus 235 ~~sp~g~~l~s 245 (309)
.|.++++++++
T Consensus 220 ~wl~~~~flv~ 230 (388)
T 1xip_A 220 TILSPQDFLAV 230 (388)
T ss_dssp EESSSSEEEEE
T ss_pred EEecCCeEEEE
Confidence 99999999987
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.41 E-value=7.4e-10 Score=95.71 Aligned_cols=224 Identities=14% Similarity=0.093 Sum_probs=140.7
Q ss_pred eEEEEeCCCC-CEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEE
Q 021669 14 ISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 14 V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~ 92 (309)
..+..|+|++ .++++...++.|..||..+++.. .+.. ...+..+++.+++..++.. +..+.+||..+++...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v~~-----~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-PFMGSALAKISDSKQLIAS-----DDGLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEEE-----TTEEEEEETTTCCEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEEEE-----CCCEEEEECCCCcEEE
Confidence 4678899974 56677777899999999877543 2322 3457788899988765544 2349999998877543
Q ss_pred Eeee---c-ccCEEEEEecCCCCeEEEecCC----CcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEE
Q 021669 93 YFKG---H-HDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMF 164 (309)
Q Consensus 93 ~~~~---h-~~~v~~v~~~~~~~~l~s~s~D----g~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 164 (309)
.... + ...++++.+.|+|+.+++...+ +...+|.+.+++ +..+
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~-----------------------------~~~~ 174 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK-----------------------------VTKL 174 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE-----------------------------EEEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc-----------------------------EEEe
Confidence 2221 1 2458899999999866654322 112222111111 1100
Q ss_pred ECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEE-EEeCCCcEEEEECC--CC-eEe--EEeeecCCCCCccceEEECC
Q 021669 165 DARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML-LTTMEGHIHVLDSF--RG-TLL--STYNVKPVSRNSTLEASFSP 238 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~-~~~~dg~v~i~d~~--~~-~~~--~~~~~~~~~~~~~~~~~~sp 238 (309)
. . .....+.++++|||+.+. +...++.|.+||.. ++ ... ..+............+++.+
T Consensus 175 ~------------~---~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 175 F------------A---DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA 239 (326)
T ss_dssp E------------E---EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT
T ss_pred e------------C---CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC
Confidence 0 0 001235788999998664 44567899999975 55 321 11211111123345688999
Q ss_pred CCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEEC-CCee-EEEEcc
Q 021669 239 EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-PGSL-MFVTGS 289 (309)
Q Consensus 239 ~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~-p~~~-~l~s~~ 289 (309)
+|+.+++...++.|.+||. +++.+..+......+.+++|+ |+++ ++++..
T Consensus 240 ~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 240 EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 9998888777789999998 677777776666678999998 8865 444433
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.38 E-value=3.6e-11 Score=105.40 Aligned_cols=263 Identities=8% Similarity=-0.073 Sum_probs=162.7
Q ss_pred CEEEEeeCCC----cEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCC-------CCCceeEEEEccCCceEE
Q 021669 24 SYLVTASDDE----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 24 ~~l~t~s~D~----~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~i~~~d~~~~~~~~ 92 (309)
...++-..++ +|-+.|..+++.+.++.....+ .+.++|+++.++.+... ..++.|.++|+.+++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3556666566 7889999999999999877666 69999999988877521 126789999999999988
Q ss_pred Eeeec-------ccCEEEEEecCCCCeEEEecC--CCcEEE--eeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEE
Q 021669 93 YFKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLL--WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYI 161 (309)
Q Consensus 93 ~~~~h-------~~~v~~v~~~~~~~~l~s~s~--Dg~v~~--Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (309)
.+.-. -.....+.++|||++++.+.. +..+.+ +|..+ ...+...+...........+++.+.++.+
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 88643 124568899999998888764 467888 99876 33333322111111122233444456666
Q ss_pred EEEECCC----CCcCCc---eEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe--EeEEeeecC-------
Q 021669 162 RMFDARK----YEKGPF---DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKP------- 225 (309)
Q Consensus 162 ~~~d~~~----~~~~~~---~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~------- 225 (309)
...|+.. ...-.. ...... ..+. . ++++..++..+. +.|.+.|..... .+..+....
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg--~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~ 260 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCS--SQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADN 260 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBC--SCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTT
T ss_pred EEEECccccccCCeEEEEeeeeeeCC--CCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccc
Confidence 6666543 000000 001111 1121 3 666766666666 999999986432 222221100
Q ss_pred CCCCccceEEECCCCCEEEEEcC---------CCcEEEEECCCCceEEEeecCCCCCcEEEECCCee-EEEEcc-ceEEE
Q 021669 226 VSRNSTLEASFSPEGMFVISGSG---------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS-SELSF 294 (309)
Q Consensus 226 ~~~~~~~~~~~sp~g~~l~s~s~---------Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~-~l~s~~-~d~~~ 294 (309)
........++|+|||++++.+.. ++.+.++|+.+.+.+..+.... ....++|+||++ ++++.. .+..+
T Consensus 261 ~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~V 339 (368)
T 1mda_H 261 FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVL 339 (368)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEE
T ss_pred cccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeE
Confidence 00011112689999988886532 2356699999999888875433 578999999986 556554 34344
Q ss_pred eeecC
Q 021669 295 WIPDL 299 (309)
Q Consensus 295 ~~~~~ 299 (309)
-++|+
T Consensus 340 sVID~ 344 (368)
T 1mda_H 340 DIYDA 344 (368)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 44443
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.36 E-value=2e-11 Score=107.36 Aligned_cols=172 Identities=10% Similarity=0.064 Sum_probs=122.8
Q ss_pred CEEEEEecCCCCeEEEecCCCcEEEeeCCCce---------e--eeeeeecCceeEEECCCCcEEEEEECCEEEEEECCC
Q 021669 100 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK---------C--QGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARK 168 (309)
Q Consensus 100 ~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 168 (309)
.+..+++++....+++|+.|+. ++|+++..+ . .....++......+ ++.+++++.++.|++||++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~~~~~l~v~dv~s 115 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVSTRNALYSLDLEE 115 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEEESSEEEEEESSS
T ss_pred cccEEEEcCCCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEEcCCcEEEEEchh
Confidence 5788999999999999998854 559864332 1 11223344334556 66677777999999999987
Q ss_pred CCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcC
Q 021669 169 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 248 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~ 248 (309)
..... ....+ ...+..+.+.+. .+++.+.||.+.+||+..+.... ....+.+++|||+| ++.|..
T Consensus 116 l~~~~-~~~~~---~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 116 LSEFR-TVTSF---EKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp TTCEE-EEEEC---SSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEEET
T ss_pred hhccC-cccee---ecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEEEc
Confidence 65321 12222 234556555543 38888999999999998776543 12357789999999 678999
Q ss_pred CCcEEEEECCCCce--EEEe------e---cCCCCCcEEEECCCeeEEEEcc
Q 021669 249 DGSVYAWSVRSGKE--VASW------M---SFDTEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 249 Dg~i~vwd~~~~~~--~~~~------~---~~~~~v~~l~~~p~~~~l~s~~ 289 (309)
||++++|+...++. .+++ . +|+..|.+|.|.++++++++-.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99999999977664 4555 2 3677899999999999888743
No 217
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.36 E-value=9.1e-09 Score=86.80 Aligned_cols=233 Identities=8% Similarity=0.108 Sum_probs=154.7
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceee-eeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCC
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 88 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~ 88 (309)
+...+.++.++++|++.++...++.|..||.. ++... .+......+..+++.+++...++... ++.|..+|.. +
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g 134 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD-G 134 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT-S
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC-C
Confidence 34678899999999988888778899999987 55432 22222345677888887765554432 5678899887 5
Q ss_pred ceEEE-eeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeec----CceeEEECCCCcEEEEEE-CCEEE
Q 021669 89 KYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAF-GGYIR 162 (309)
Q Consensus 89 ~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~i~ 162 (309)
+.... +......+.++.+.++++..++...++.|..+|. +++... +... .......++++.++.+.. .+.|.
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 54322 2334567899999999997777777889999997 444332 2211 122345666676666554 56899
Q ss_pred EEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCE
Q 021669 163 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 242 (309)
Q Consensus 163 ~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 242 (309)
.||.. +....+........+..++++++|+++++...++.|..||. ++... .+... .....+..+++.|+|+.
T Consensus 213 ~~~~~----g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~-~~~~~~~~i~~~~~g~l 285 (300)
T 2qc5_A 213 RITTT----GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQ-TENAEPHGITFGKDGSV 285 (300)
T ss_dssp EECTT----CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEECC-STTCCCCCEEECTTSCE
T ss_pred EEcCC----CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEECC-ccCCccceeEeCCCCCE
Confidence 99872 22222323233455788999999998888777899999998 45443 33322 12345678899999987
Q ss_pred EEEEcCCCcEEEEECC
Q 021669 243 VISGSGDGSVYAWSVR 258 (309)
Q Consensus 243 l~s~s~Dg~i~vwd~~ 258 (309)
+++.. . .|..+|..
T Consensus 286 ~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 286 WFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEECS-S-EEEEEEEC
T ss_pred EEEcc-C-ceEEeCCC
Confidence 77665 4 67777653
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.35 E-value=4.6e-13 Score=118.06 Aligned_cols=205 Identities=17% Similarity=0.058 Sum_probs=114.6
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccC-
Q 021669 22 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDR- 100 (309)
Q Consensus 22 ~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~- 100 (309)
++.++++++.|+.|..||..+|+.+..+.. ..+....+..++..++.++ .|+.++.||.++|+.+..+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s---~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDP---NDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECT---TTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeC---CCCEEEEEECCCCceeeeeeccCccc
Confidence 467899999999999999999999887776 3344333444554455433 3889999999998877666544221
Q ss_pred EEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeC
Q 021669 101 VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG 180 (309)
Q Consensus 101 v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 180 (309)
+.+.....++..+++++.|+.++.||.++++....+....
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------------------------------------- 122 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------------------------------------- 122 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC----------------------------------------------------
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----------------------------------------
Confidence 1110011134567788889999999988776533221100
Q ss_pred CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCC---CEEEEEcCCCcEEEEEC
Q 021669 181 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG---MFVISGSGDGSVYAWSV 257 (309)
Q Consensus 181 ~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g---~~l~s~s~Dg~i~vwd~ 257 (309)
...++|++..+++++.|+.|+.||..+|+.+-.+..... ...++++++ ..++.++.||.++.||.
T Consensus 123 -------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~-----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 123 -------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY-----AASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp -----------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE-----CCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred -------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc-----cCccccCCccccceEEEECCCCEEEEEEC
Confidence 012345677788888889999999988886644432111 112333432 56777889999999999
Q ss_pred CCCceEEEeecCCCCC-cEEEECCCeeE
Q 021669 258 RSGKEVASWMSFDTEP-PVIKWTPGSLM 284 (309)
Q Consensus 258 ~~~~~~~~~~~~~~~v-~~l~~~p~~~~ 284 (309)
.+++.+-.+.. .+++ ...++++++..
T Consensus 191 ~tG~~~W~~~~-~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 191 ESGDVLWIQNY-ASPVVAFYVWQREGLR 217 (369)
T ss_dssp TTCCEEEEEEC-SSCEEEEEECTTSSCE
T ss_pred CCCcEEEEecC-CCceEEEEEecCCceE
Confidence 99998776653 3333 33455666653
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.29 E-value=2.6e-09 Score=90.86 Aligned_cols=196 Identities=14% Similarity=0.140 Sum_probs=125.2
Q ss_pred CCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec----cccceeEEEEecCCCEEEEEcCCCC------Cce
Q 021669 10 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS----KKYGVDLVCFTSHPTTVIYSSKNGW------DES 79 (309)
Q Consensus 10 h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~s~~g~------d~~ 79 (309)
+...+.++.++|+|+++++. +..|.+||.++++....... ....+..+++.+++...+....... ...
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence 35678999999999966654 67899999987765332221 1234677889999885443321110 123
Q ss_pred eEEEEccCCceEEEeeecccCEEEEEecCCCCeE-EEecCCCcEEEeeC--CCceeeeeeeecCceeEEECCCCcEEEEE
Q 021669 80 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQ--RAEKCQGLLRVQGRPAAAYDDQGLVFAVA 156 (309)
Q Consensus 80 i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~v~~Wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
-++|.+.....+..+..+....+.++|+||++.| ++.+.++.|..||+ .++..... + .
T Consensus 130 ~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~-~--------------~---- 190 (297)
T 3g4e_A 130 GALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR-R--------------S---- 190 (297)
T ss_dssp EEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE-E--------------E----
T ss_pred cEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc-E--------------E----
Confidence 4566554322233344455667899999999865 56677889999986 33321100 0 0
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEE
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 236 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
+.++.. .......++++++|++.++...++.|..||..+++.+..+.. +...+.+++|
T Consensus 191 ------~~~~~~-------------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~---p~~~~t~~~f 248 (297)
T 3g4e_A 191 ------VYKLEK-------------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL---PVDKTTSCCF 248 (297)
T ss_dssp ------EEECCG-------------GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC---SSSBEEEEEE
T ss_pred ------EEECCC-------------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC---CCCCceEEEE
Confidence 000000 001235678999999988888889999999988998887764 2345778999
Q ss_pred C-CCCCEEEEEcC
Q 021669 237 S-PEGMFVISGSG 248 (309)
Q Consensus 237 s-p~g~~l~s~s~ 248 (309)
+ ||++.|+.++.
T Consensus 249 ~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 249 GGKNYSEMYVTCA 261 (297)
T ss_dssp ESGGGCEEEEEEB
T ss_pred eCCCCCEEEEEcC
Confidence 8 88877655543
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=1.4e-09 Score=103.29 Aligned_cols=260 Identities=12% Similarity=0.125 Sum_probs=162.8
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeecc-c----cceeEEEEecCCCEEEEEcCC---CCCceeEEEEccCCceEEEe
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSK-K----YGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 94 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~~~~s~~---g~d~~i~~~d~~~~~~~~~~ 94 (309)
+..++.++.|+.|..+|..+|+.+..+... . ..+...-.. .+..+++++.. +.++.+..+|.++|+.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 567888889999999999999988766542 1 111110001 13345554322 23789999999999998877
Q ss_pred eecc-------------------------------cCEEEEEecCCCCeEEEecCCCc-------------------EEE
Q 021669 95 KGHH-------------------------------DRVVSLSLCSSKDCFISGSLDRT-------------------VLL 124 (309)
Q Consensus 95 ~~h~-------------------------------~~v~~v~~~~~~~~l~s~s~Dg~-------------------v~~ 124 (309)
..-. ..-..+.+.|+.+.+..++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 5210 01124677788888888877764 999
Q ss_pred eeCCCceeeeeeeecCc---------eeEEE--CCCC----cEEEEEECCEEEEEECCCCCcC--------CceE-EE--
Q 021669 125 WDQRAEKCQGLLRVQGR---------PAAAY--DDQG----LVFAVAFGGYIRMFDARKYEKG--------PFDI-FS-- 178 (309)
Q Consensus 125 Wd~~~~~~~~~~~~~~~---------~~~~~--~~~~----~~~~~~~~~~i~~~d~~~~~~~--------~~~~-~~-- 178 (309)
||.++++....+..... ..... ...+ .++....+|.++++|.++.+.- .... ..
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999988766543211 01111 1122 2334445789999997664320 0000 00
Q ss_pred -------------e-CCC----------CCCCeEEEEccCCCEEEEEeC-------------------------------
Q 021669 179 -------------V-GGD----------ISDANVVKFSNDGRLMLLTTM------------------------------- 203 (309)
Q Consensus 179 -------------~-~~~----------~~~~~~v~~s~dg~~l~~~~~------------------------------- 203 (309)
. .+. ...-..++++|+..++.+...
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 0 000 001123688888777766522
Q ss_pred --------------CCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecC
Q 021669 204 --------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF 269 (309)
Q Consensus 204 --------------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~ 269 (309)
+|.++.||+.+++.+-.+... .....-.++..|..++.|+.||.++.||.++++.+.++...
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV----TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCC----CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 377999999999987665432 12233356678889999999999999999999999887644
Q ss_pred CC-CCcEEEECCCeeEEEE
Q 021669 270 DT-EPPVIKWTPGSLMFVT 287 (309)
Q Consensus 270 ~~-~v~~l~~~p~~~~l~s 287 (309)
.+ ...-+.|..+|++.+.
T Consensus 516 ~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 516 SGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCCSCCEEEEETTEEEEE
T ss_pred CCcccCceEEEECCEEEEE
Confidence 33 2344778888875544
No 221
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.29 E-value=2.7e-09 Score=90.94 Aligned_cols=205 Identities=11% Similarity=0.171 Sum_probs=131.5
Q ss_pred CCcceEEEEeCCC-CCEEEEeeCCCcEEEEEcCCCceeee-eec----cccceeEEEEecCCCEEEEEcCCC--------
Q 021669 10 YNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKT-INS----KKYGVDLVCFTSHPTTVIYSSKNG-------- 75 (309)
Q Consensus 10 h~~~V~~i~~s~~-~~~l~t~s~D~~v~iWd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~s~~g-------- 75 (309)
+...+.++.++++ |+++++.. +..|.+||.+ ++.... ... ....+..+++.+++...++....+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 5567889999999 76665554 4478999988 665433 221 112467889988887555443210
Q ss_pred ----CCceeEEEEccCCceEEEeeecccCEEEEEec----CCCCeE-EEecCCCcEEEeeCC-CceeeeeeeecCceeEE
Q 021669 76 ----WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLC----SSKDCF-ISGSLDRTVLLWDQR-AEKCQGLLRVQGRPAAA 145 (309)
Q Consensus 76 ----~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l-~s~s~Dg~v~~Wd~~-~~~~~~~~~~~~~~~~~ 145 (309)
..+.+..+|.. ++.. .+..+......++++ ++++.+ ++...++.|.+||++ +++....
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~---------- 214 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK---------- 214 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE----------
T ss_pred cccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc----------
Confidence 01456666665 4433 333445567889999 998654 555678899999864 2221000
Q ss_pred ECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCC-CCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeec
Q 021669 146 YDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI-SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 224 (309)
Q Consensus 146 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 224 (309)
.++. ...... .....++++++|+++++...++.|.+||..+++.+..+..
T Consensus 215 ----------------~~~~------------~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~- 265 (314)
T 1pjx_A 215 ----------------KVWG------------HIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC- 265 (314)
T ss_dssp ----------------EEEE------------ECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-
T ss_pred ----------------eEEE------------ECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC-
Confidence 0000 000010 1235688999999999888899999999887776665543
Q ss_pred CCCCCccceEEECCCCCEE-EEEcCCCcEEEEECCC
Q 021669 225 PVSRNSTLEASFSPEGMFV-ISGSGDGSVYAWSVRS 259 (309)
Q Consensus 225 ~~~~~~~~~~~~sp~g~~l-~s~s~Dg~i~vwd~~~ 259 (309)
+...+..++|+|+|++| ++...++.|..|++..
T Consensus 266 --~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 266 --PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp --SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred --CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 23556789999999955 4556678999999864
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.24 E-value=2.4e-09 Score=101.57 Aligned_cols=259 Identities=10% Similarity=0.065 Sum_probs=165.0
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCceeeeeecc-c----cceeEEEEecCCCEEEEEcCC---CCCceeEEEEccCCceEEE
Q 021669 22 SSSYLVTASDDESIRLYDVTAATCLKTINSK-K----YGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRY 93 (309)
Q Consensus 22 ~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~~~~s~~---g~d~~i~~~d~~~~~~~~~ 93 (309)
++..+..++.|+.|..+|..+|+.+..+... . ..+...-. ..+..+++++.. +.++.|+.+|.++|+.+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~-v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPR-VFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCE-EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcE-EECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 3567888889999999999999998777654 2 11111001 123455555432 1368999999999999887
Q ss_pred eeecccC--------------------------------EEEEEecCCCCeEEEecCCC-------------------cE
Q 021669 94 FKGHHDR--------------------------------VVSLSLCSSKDCFISGSLDR-------------------TV 122 (309)
Q Consensus 94 ~~~h~~~--------------------------------v~~v~~~~~~~~l~s~s~Dg-------------------~v 122 (309)
+...... ...+.+.++++.+..++.++ +|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7543211 12456778888887776654 59
Q ss_pred EEeeCCCceeeeeeeecCc----------eeEE-ECCCC----cEEEEEECCEEEEEECCCCCcCCceEEEeCC------
Q 021669 123 LLWDQRAEKCQGLLRVQGR----------PAAA-YDDQG----LVFAVAFGGYIRMFDARKYEKGPFDIFSVGG------ 181 (309)
Q Consensus 123 ~~Wd~~~~~~~~~~~~~~~----------~~~~-~~~~~----~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------ 181 (309)
..+|.++++....+..... +... ...++ .++....+|.++++|.++.+.- -......
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l--~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI--SAKNFVPVNWASG 363 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE--EEEESSCCSSEEE
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe--ccccccccCcccc
Confidence 9999999988766543211 1111 11122 2444445789999997764320 0000000
Q ss_pred -----------------CC----------CCCeEEEEccCCCEEEEEeC-------------------------------
Q 021669 182 -----------------DI----------SDANVVKFSNDGRLMLLTTM------------------------------- 203 (309)
Q Consensus 182 -----------------~~----------~~~~~v~~s~dg~~l~~~~~------------------------------- 203 (309)
.. ..-..++++|+..++.+...
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 00 01124688998887766543
Q ss_pred ------------CCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCC-
Q 021669 204 ------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFD- 270 (309)
Q Consensus 204 ------------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~- 270 (309)
.|.|..||+.+++.+-.+... ...+...+++++..++.++.||.+++||..+++.+.++....
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 519 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV----SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG 519 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCC----CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC
Confidence 278999999999987665432 223445577788899999999999999999999998876433
Q ss_pred CCCcEEEECCCeeEEEE
Q 021669 271 TEPPVIKWTPGSLMFVT 287 (309)
Q Consensus 271 ~~v~~l~~~p~~~~l~s 287 (309)
...+-+.|.++|++++.
T Consensus 520 ~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 520 VVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cccCCEEEEeCCEEEEE
Confidence 33344677788765543
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.23 E-value=1.7e-09 Score=102.97 Aligned_cols=233 Identities=12% Similarity=0.119 Sum_probs=140.3
Q ss_pred ccceeEEEEecCCCEEEEEcCC-CC-CceeEEEEccCCceEEEeeecccCE--EEEEecCCCCeEEEecCCCc-------
Q 021669 53 KYGVDLVCFTSHPTTVIYSSKN-GW-DESLRLLSLHDNKYLRYFKGHHDRV--VSLSLCSSKDCFISGSLDRT------- 121 (309)
Q Consensus 53 ~~~v~~~~~~~~~~~~~~~s~~-g~-d~~i~~~d~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~s~Dg~------- 121 (309)
...+..++|+|+++.++++... |. ..+|+++|+++++.+.. +...+ ..++|+ |++.|+.++.|..
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET---PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE---EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc---ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3457778999999998876532 22 37899999999986543 22222 567899 9999888887754
Q ss_pred ------EEEeeCCCceeee--eeeecC-----ceeEEECCCCcEEEEEE-----CCEEEEEECCCCCcCCceEEEeCCCC
Q 021669 122 ------VLLWDQRAEKCQG--LLRVQG-----RPAAAYDDQGLVFAVAF-----GGYIRMFDARKYEKGPFDIFSVGGDI 183 (309)
Q Consensus 122 ------v~~Wd~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~ 183 (309)
|++|++.++.... ...... .....+++++..+.... .+.|.++|+..... ... .+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-~~~--~l~~~~ 280 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-PLL--TVQGDL 280 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC-CCE--EEECSS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC-ceE--EEeCCC
Confidence 9999987654321 111111 23456678877554432 25899999865321 122 222222
Q ss_pred CCCeEEEEccCCCEEEEEeC----CCcEEEEECCCCeE--eEEeeecCCCCCccceEEECCCCCEEEEEcCCC---cEEE
Q 021669 184 SDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGTL--LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG---SVYA 254 (309)
Q Consensus 184 ~~~~~v~~s~dg~~l~~~~~----dg~v~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg---~i~v 254 (309)
...... ++++|..++..+. .+.|..+|+.++.. ...+.. +...+. .|+|++++|+....++ .|++
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~---~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP---ERQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC---CCSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec---CCCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 333333 6777766554443 36799999877643 223322 122233 8999999888776655 7899
Q ss_pred EECCCCceEEEee-cCCCCCcEEEECCCeeEEE-Eccce---EEEeeecC
Q 021669 255 WSVRSGKEVASWM-SFDTEPPVIKWTPGSLMFV-TGSSE---LSFWIPDL 299 (309)
Q Consensus 255 wd~~~~~~~~~~~-~~~~~v~~l~~~p~~~~l~-s~~~d---~~~~~~~~ 299 (309)
||+..+ ....+. ...+.+..+.++|++..+. +.++. ..+|..++
T Consensus 355 ~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 355 FDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp ECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 999754 333332 2334456677788876443 33321 44555544
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=5.1e-10 Score=97.38 Aligned_cols=230 Identities=10% Similarity=0.011 Sum_probs=145.9
Q ss_pred CCCcceEEEEeCCCCCEEEEeeC-----CCcEEEEEcCCCceeeeeeccc------cceeEEEEecCCCEEEEEcC-CCC
Q 021669 9 DYNGRISSMDFHKSSSYLVTASD-----DESIRLYDVTAATCLKTINSKK------YGVDLVCFTSHPTTVIYSSK-NGW 76 (309)
Q Consensus 9 ~h~~~V~~i~~s~~~~~l~t~s~-----D~~v~iWd~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~s~-~g~ 76 (309)
+|-..+..|++++++++.++-.. +..|.+||+.+++.++.+.... .....+++.+++..++.+.. .+.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 35568999999999987765543 6899999999998777665321 23567888876555555432 113
Q ss_pred CceeEEEEccCCceEEEeeecccCEE-EEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEE
Q 021669 77 DESLRLLSLHDNKYLRYFKGHHDRVV-SLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV 155 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~h~~~v~-~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (309)
++.|.+||+.+++..+.+.+|..... ...+.+++..+.+.+.|++++.|.. .....++++++..+..
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~------------~~~gia~s~dg~~ly~ 211 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL------------GVNGIVLDAENEWLYL 211 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC------------CEEEEEECTTSCEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceec------------ccceeEeccCCCEEEE
Confidence 67999999998887777766533211 1344557777777788888877742 1123566666654444
Q ss_pred E-EC-CEEEEEECCCCCcC---------CceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeec
Q 021669 156 A-FG-GYIRMFDARKYEKG---------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 224 (309)
Q Consensus 156 ~-~~-~~i~~~d~~~~~~~---------~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 224 (309)
+ .. ..+..++......+ .+... ++......++++++|.++++...++.|.+||..+++.......
T Consensus 212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~- 287 (343)
T 2qe8_A 212 SPMHSTSMYRIKSADLSNLQLTDAELGSKIERY---SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD- 287 (343)
T ss_dssp EESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE---EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-
T ss_pred EeCCCCeEEEEEHHHhcCCCCChhhhhcceEec---ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-
Confidence 3 33 35555543211110 01111 1112345689999999999999999999999856764433221
Q ss_pred CCCCCccceEEECCCCCEEEEEcCCCcEEEE
Q 021669 225 PVSRNSTLEASFSPEGMFVISGSGDGSVYAW 255 (309)
Q Consensus 225 ~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vw 255 (309)
+ ....+..++|.|+|+.+++.+..+.+.+|
T Consensus 288 ~-~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 288 E-KLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp G-GGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred C-ceecCCeeEECCCCcEEEEeCcccccccc
Confidence 1 12345689999999888888765544333
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.19 E-value=3.6e-09 Score=88.05 Aligned_cols=213 Identities=9% Similarity=0.040 Sum_probs=142.7
Q ss_pred ccceEecCCCcc--eEEEEeCCCCCEEEEeeC--CCcEEEEEcCCCceeeeeecccc-ceeEEEEecCCCEEEEEcCCCC
Q 021669 2 EVGMSFRDYNGR--ISSMDFHKSSSYLVTASD--DESIRLYDVTAATCLKTINSKKY-GVDLVCFTSHPTTVIYSSKNGW 76 (309)
Q Consensus 2 ~~~~~~~~h~~~--V~~i~~s~~~~~l~t~s~--D~~v~iWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~s~~g~ 76 (309)
+++.++. |... ...+.|+|++.+.++.+. +++|++.|+.+++.++.+..... ....+++ +++.++.+.. .
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~--~ 84 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVW--L 84 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEET--T
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEe--c
Confidence 4556663 4443 579999998877776664 68999999999999888753221 1223444 4566666542 4
Q ss_pred CceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEE
Q 021669 77 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA 156 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
++.+.++|.++.+.+..+.--... ...+++|++.++.+..++.+.+.|.++.+....+.+...
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~--------------- 147 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN--------------- 147 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET---------------
T ss_pred CCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC---------------
Confidence 789999999999888887522122 233566877776666788999999888765544432110
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC---------
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS--------- 227 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~--------- 227 (309)
+. .....+.+.+. +|+.++....++.|.+.|+.+++.+..+......
T Consensus 148 --~~---------------------p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 148 --GH---------------------RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp --TE---------------------ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred --Cc---------------------ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 00 00113455566 7777777777889999999999999887653110
Q ss_pred -CCccceEEECCCCC-EEEEEcCCCcEEEEECCCC
Q 021669 228 -RNSTLEASFSPEGM-FVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 228 -~~~~~~~~~sp~g~-~l~s~s~Dg~i~vwd~~~~ 260 (309)
......++|+|+++ .++|+...+.+++.++...
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 01335799999975 6666777888999888654
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.19 E-value=6.3e-09 Score=98.70 Aligned_cols=268 Identities=14% Similarity=0.093 Sum_probs=161.2
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeeccccc-----------eeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKKYG-----------VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
+..+..++.++.|.-+|..+|+.+..+...... ...+++ ++..+++++. |+.+..+|.++|+.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~---dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAW---DGRLIALDAATGKEV 151 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECT---TSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcC---CCEEEEEECCCCCEE
Confidence 456667777899999999999998776543210 011222 3456666543 789999999999999
Q ss_pred EEeeec-c----cCEEEEEecCCCCeEEEecC------CCcEEEeeCCCceeeeeeeecCc-------------------
Q 021669 92 RYFKGH-H----DRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGR------------------- 141 (309)
Q Consensus 92 ~~~~~h-~----~~v~~v~~~~~~~~l~s~s~------Dg~v~~Wd~~~~~~~~~~~~~~~------------------- 141 (309)
..+..+ . ..+.+.-...++ .++.++. |+.|+.+|.++++....+.....
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 888765 2 112211111233 4444443 79999999999987655432110
Q ss_pred ---------------eeEEECCCCcEEEEEE-CC-------------------EEEEEECCCCCcCCceEEEeCCC----
Q 021669 142 ---------------PAAAYDDQGLVFAVAF-GG-------------------YIRMFDARKYEKGPFDIFSVGGD---- 182 (309)
Q Consensus 142 ---------------~~~~~~~~~~~~~~~~-~~-------------------~i~~~d~~~~~~~~~~~~~~~~~---- 182 (309)
....+++...++..+. ++ .|..+|.++.+.. . .+....+
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~-W-~~~~~~~d~wd 308 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYK-W-HYQETPGDNWD 308 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE-E-EEESSTTCCSC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEE-E-EEecCCCcccc
Confidence 1234554444443332 21 4888887654321 0 1111111
Q ss_pred ---CCCCeEEEEccCC---CEEEEEeCCCcEEEEECCCCeEeEEeeecCCC--------CC-------------------
Q 021669 183 ---ISDANVVKFSNDG---RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS--------RN------------------- 229 (309)
Q Consensus 183 ---~~~~~~v~~s~dg---~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~--------~~------------------- 229 (309)
......+....+| ..++.++.+|.++++|..+|+++-.....+.. ..
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~ 388 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG 388 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC
Confidence 1223334455588 67888999999999999999998765432110 00
Q ss_pred ----cc-ceEEECCCCCEEEEEcC-------------------------------------------CCcEEEEECCCCc
Q 021669 230 ----ST-LEASFSPEGMFVISGSG-------------------------------------------DGSVYAWSVRSGK 261 (309)
Q Consensus 230 ----~~-~~~~~sp~g~~l~s~s~-------------------------------------------Dg~i~vwd~~~~~ 261 (309)
.. ..++|+|+++.+++... .|.|+.||+.+++
T Consensus 389 ~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~ 468 (677)
T 1kb0_A 389 PYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK 468 (677)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE
T ss_pred cccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc
Confidence 00 14689999888877643 2789999999999
Q ss_pred eEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 262 EVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 262 ~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
.+-.... ...+....+..++.++..++.|.+++.+++
T Consensus 469 ~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 469 AAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred EEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 8777653 333444445555555555666655555544
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.17 E-value=5.3e-09 Score=89.31 Aligned_cols=204 Identities=16% Similarity=0.166 Sum_probs=131.1
Q ss_pred eEEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeeec--CceeEEECCCCcEEEEEEC-CEEEEEE
Q 021669 90 YLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDDQGLVFAVAFG-GYIRMFD 165 (309)
Q Consensus 90 ~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~i~~~d 165 (309)
.+..+........+..|+++++ .+++...++.|..|+. +++. ..+... ......+++++.++.+... +.|..|+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 3444555556678899999988 6778888999999997 4432 222222 2234567778887776654 7899998
Q ss_pred CCCCCcCCceEEE--eCC-CCCCCeEEEEccCCCEEEE----EeC-------------CCcEEEEECCCCeEeEEeeecC
Q 021669 166 ARKYEKGPFDIFS--VGG-DISDANVVKFSNDGRLMLL----TTM-------------EGHIHVLDSFRGTLLSTYNVKP 225 (309)
Q Consensus 166 ~~~~~~~~~~~~~--~~~-~~~~~~~v~~s~dg~~l~~----~~~-------------dg~v~i~d~~~~~~~~~~~~~~ 225 (309)
.. +.+..+. ..+ ....++.++++|+|+++++ +.. .+.|+.+|..+++......
T Consensus 114 ~~----g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~--- 186 (305)
T 3dr2_A 114 AD----GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD--- 186 (305)
T ss_dssp TT----SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE---
T ss_pred CC----CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec---
Confidence 64 1222221 111 1234567899999998886 332 3568888876665443221
Q ss_pred CCCCccceEEECCCCCEEEEEcCC------CcEEEEECCCCceEEE---ee-cCCCCCcEEEECCCeeEEEEccceEEEe
Q 021669 226 VSRNSTLEASFSPEGMFVISGSGD------GSVYAWSVRSGKEVAS---WM-SFDTEPPVIKWTPGSLMFVTGSSELSFW 295 (309)
Q Consensus 226 ~~~~~~~~~~~sp~g~~l~s~s~D------g~i~vwd~~~~~~~~~---~~-~~~~~v~~l~~~p~~~~l~s~~~d~~~~ 295 (309)
......++|+|||+.|+.+... +.|++|++.... +.. +. .....+..+++.++|++.++....+..|
T Consensus 187 --~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~ 263 (305)
T 3dr2_A 187 --LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVF 263 (305)
T ss_dssp --ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEE
T ss_pred --CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEE
Confidence 1233468999999988877665 789999987643 221 11 1234566799999999777765557777
Q ss_pred eecCCCcccc
Q 021669 296 IPDLSKLGAY 305 (309)
Q Consensus 296 ~~~~~~~~~~ 305 (309)
.++...++.+
T Consensus 264 ~~~g~~~~~~ 273 (305)
T 3dr2_A 264 DSDGQLLGHI 273 (305)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCCEEEEE
Confidence 7766554443
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.16 E-value=1.8e-08 Score=86.46 Aligned_cols=259 Identities=13% Similarity=0.111 Sum_probs=156.1
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 90 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~ 90 (309)
...+.++...+++.+.+ ++.+ +..+|. +++.+..+..........++. ...++.++. ++.+..+|.. ++.
T Consensus 59 ~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~---~~~l~~~d~~-g~~ 128 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSM---DGHLYAINTD-GTE 128 (330)
T ss_dssp GEEEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECT---TSEEEEECTT-SCE
T ss_pred CCcccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEec---CCEEEEEcCC-CCE
Confidence 34456777777775544 4444 888886 676665554433222223333 445555543 6789999988 777
Q ss_pred EEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEEEECCEEEEEECCC
Q 021669 91 LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAVAFGGYIRMFDARK 168 (309)
Q Consensus 91 ~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 168 (309)
+..+..+...+.++...++++ +..++.++.+..+|.. ++......... ........++.++.+. +.+..+| .+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~ 203 (330)
T 3hxj_A 129 KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PD 203 (330)
T ss_dssp EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TT
T ss_pred EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CC
Confidence 776665555566666666665 5667778999999987 65544433322 1223444566666555 7788888 33
Q ss_pred CCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcC
Q 021669 169 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 248 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~ 248 (309)
.+ ...........+.++..+++|.+.+ ++.++.+..+|. ++..+..+... ......+.+.++| .|..++.
T Consensus 204 g~----~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~~~---~~~~~~~~~~~~g-~l~v~t~ 273 (330)
T 3hxj_A 204 GT----EKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFKTG---KRIESSPVIGNTD-TIYFGSY 273 (330)
T ss_dssp SC----EEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEECS---SCCCSCCEECTTS-CEEEECT
T ss_pred Cc----EEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEeeCC---CCccccceEcCCC-eEEEecC
Confidence 21 1222222234566778888887554 556788888874 55655544422 1222334555555 5667778
Q ss_pred CCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccce-EEEe
Q 021669 249 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSFW 295 (309)
Q Consensus 249 Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d-~~~~ 295 (309)
+|.++.+|. +++.+..+......+.++...+++++.+.+... +.+.
T Consensus 274 ~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 274 DGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp TCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEE
T ss_pred CCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEE
Confidence 888999996 677766665445567788888888877755544 4433
No 229
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.16 E-value=6.1e-07 Score=79.86 Aligned_cols=195 Identities=8% Similarity=0.001 Sum_probs=123.2
Q ss_pred ccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEE-ECC--EEEEEECCCCCcCCc
Q 021669 98 HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA-FGG--YIRMFDARKYEKGPF 174 (309)
Q Consensus 98 ~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~i~~~d~~~~~~~~~ 174 (309)
-.....+++.++++.+++...++.|+.||+.+++..........+...+.+++..+..+ .++ .|..++...... .
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~--~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWA--P 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTC--E
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCce--e
Confidence 34688999999999888888889999999987766544333222235666666544444 433 788888653221 1
Q ss_pred eEE-Ee-CCCCCCCeEEEEcc-CCCEEEEEeCCCcEEEEECCCCeEeEEeee--cCCCCCcc-c-eEEECCC-CCEEEEE
Q 021669 175 DIF-SV-GGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNV--KPVSRNST-L-EASFSPE-GMFVISG 246 (309)
Q Consensus 175 ~~~-~~-~~~~~~~~~v~~s~-dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~~~~~~~-~-~~~~sp~-g~~l~s~ 246 (309)
... .. .........++++| +|.+++ ...++.|+.||..++... .+.. ........ . .++|+|+ ++.+++-
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 111 11 11234567889999 565555 666889999998876532 2210 10111111 3 7999995 6666777
Q ss_pred cCCCcEEEEECCCCceEEEeecCC---------------CCCcEEEECCCeeEEEEcc-ceEEEeeec
Q 021669 247 SGDGSVYAWSVRSGKEVASWMSFD---------------TEPPVIKWTPGSLMFVTGS-SELSFWIPD 298 (309)
Q Consensus 247 s~Dg~i~vwd~~~~~~~~~~~~~~---------------~~v~~l~~~p~~~~l~s~~-~d~~~~~~~ 298 (309)
...+.|+.|+.... +..+.++. ..+..++++|+++++++-. ...+++.++
T Consensus 286 ~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 286 QNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp TTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred CCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 78899999998643 33343332 2367799999999888866 554444443
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.15 E-value=1.4e-07 Score=82.66 Aligned_cols=227 Identities=14% Similarity=0.102 Sum_probs=141.6
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCE-
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRV- 101 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v- 101 (309)
+..+..++.|+.|..+|..+|+.+............... .+..++.++. ++.+..+|.++|+.+..+.......
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~---~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTS---NGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECT---TSEEEEEETTTCCEEEEEECCC----
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcC---CCeEEEEECCCCcEEEEEeCCCCcee
Confidence 457777888999999999999987665543221111122 2345555543 6789999999999887776432211
Q ss_pred ----EEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCce------------eEEECCCCcEEEEEECCEEEEEE
Q 021669 102 ----VSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP------------AAAYDDQGLVFAVAFGGYIRMFD 165 (309)
Q Consensus 102 ----~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~i~~~d 165 (309)
..... .+..++.++.++.+..+|.++++........... .......+.++.++.++.+..+|
T Consensus 178 ~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 178 LRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALD 255 (376)
T ss_dssp -CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEE
T ss_pred ecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEE
Confidence 11111 2456778888999999999988776554332100 00011235566666678899999
Q ss_pred CCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEE
Q 021669 166 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 245 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s 245 (309)
.++.+. ..... ........ .++..+..++.++.+..+|..+++.+-..... .......... .+..|+.
T Consensus 256 ~~tG~~----~w~~~--~~~~~~~~--~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~~~~--~~~~l~v 323 (376)
T 3q7m_A 256 LRSGQI----MWKRE--LGSVNDFI--VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDL--LHRLLTSPVL--YNGNLVV 323 (376)
T ss_dssp TTTCCE----EEEEC--CCCEEEEE--EETTEEEEEETTCCEEEEETTTCCEEEEECTT--TTSCCCCCEE--ETTEEEE
T ss_pred CCCCcE----Eeecc--CCCCCCce--EECCEEEEEcCCCeEEEEECCCCcEEEeeccc--CCCcccCCEE--ECCEEEE
Confidence 865431 12221 11222222 34666777888999999999999877554311 1111111222 3578889
Q ss_pred EcCCCcEEEEECCCCceEEEeec
Q 021669 246 GSGDGSVYAWSVRSGKEVASWMS 268 (309)
Q Consensus 246 ~s~Dg~i~vwd~~~~~~~~~~~~ 268 (309)
++.+|.++++|..+++.+.....
T Consensus 324 ~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 324 GDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp ECTTSEEEEEETTTCCEEEEEEC
T ss_pred EeCCCeEEEEECCCCcEEEEEec
Confidence 99999999999999998877654
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.15 E-value=1.2e-07 Score=84.16 Aligned_cols=222 Identities=11% Similarity=0.096 Sum_probs=138.9
Q ss_pred cCCCEEEEEcCCCCCceeEEEEccCC----ceEEEee------ec-ccCEEEEEecCCCCeEEEecCC------CcEEEe
Q 021669 63 SHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFK------GH-HDRVVSLSLCSSKDCFISGSLD------RTVLLW 125 (309)
Q Consensus 63 ~~~~~~~~~s~~g~d~~i~~~d~~~~----~~~~~~~------~h-~~~v~~v~~~~~~~~l~s~s~D------g~v~~W 125 (309)
.+.++++..... +..|.++|+.+. +.++++. .. ...-..+...|++ .++++..+ +.+.+.
T Consensus 93 ~~r~~l~v~~l~--s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLR--SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTT--TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCC--CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 566677766543 789999999765 5556652 11 1245667788999 88877666 789999
Q ss_pred eCCCceeeeeeeecCce-----eEEECCCCcEEEEEE--------------------CCEEEEEECCCCCcCCceEEEeC
Q 021669 126 DQRAEKCQGLLRVQGRP-----AAAYDDQGLVFAVAF--------------------GGYIRMFDARKYEKGPFDIFSVG 180 (309)
Q Consensus 126 d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~ 180 (309)
|.++.+.+..+.....+ ..-+++.+.++.++. ++.|.+||+...+ ....+.++
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg 247 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLG 247 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESC
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecC
Confidence 99988888777543221 134466666555553 6899999987532 12222332
Q ss_pred CCCCCCeEEEE--ccCCCEEEEEe------CCCcEEEEECCCCeEeE--EeeecCC---------C------CCccceEE
Q 021669 181 GDISDANVVKF--SNDGRLMLLTT------MEGHIHVLDSFRGTLLS--TYNVKPV---------S------RNSTLEAS 235 (309)
Q Consensus 181 ~~~~~~~~v~~--s~dg~~l~~~~------~dg~v~i~d~~~~~~~~--~~~~~~~---------~------~~~~~~~~ 235 (309)
........+.| +|+|+++..+. .+++|.+|....+.... .+..... . ......+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 11112234445 99998776655 56788776654443221 1111110 0 13456789
Q ss_pred ECCCCCEEEEEcC-CCcEEEEECCC---CceEEEeecCC--------------CCCcEEEECCCeeEEEEcc
Q 021669 236 FSPEGMFVISGSG-DGSVYAWSVRS---GKEVASWMSFD--------------TEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 236 ~sp~g~~l~s~s~-Dg~i~vwd~~~---~~~~~~~~~~~--------------~~v~~l~~~p~~~~l~s~~ 289 (309)
+||||++|+.+.. .+.|.++|+.. .+.+..+..-. +....++++|||+.|..+.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999988744 67999999863 23444443211 1367899999998776655
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.14 E-value=5e-08 Score=85.60 Aligned_cols=229 Identities=9% Similarity=0.027 Sum_probs=139.5
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeeccc---------cceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEE
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKK---------YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY 93 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~ 93 (309)
+..+..++.++.|..+|..+|+.+....... ..+. .....++..++.++. ++.+..+|.++|+.+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~~~---~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLS-GGVTVSGGHVYIGSE---KAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEE-EEEEEETTEEEEEET---TSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccc-cCceEeCCEEEEEcC---CCEEEEEECCCCCEEEE
Confidence 5677788889999999999999876655421 1121 122224456666543 67899999999998877
Q ss_pred eeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCc-------eeEEECCCCcEEEEEECCEEEEEEC
Q 021669 94 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR-------PAAAYDDQGLVFAVAFGGYIRMFDA 166 (309)
Q Consensus 94 ~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~d~ 166 (309)
+............ .+..++.++.++.+..+|.++++.......... ..... ..+.++.+..++.+..+|.
T Consensus 129 ~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 129 TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEECCTTTEEEEEET
T ss_pred EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEEEcCCCEEEEEEC
Confidence 6644322111112 234777788899999999998887655543221 11111 1345555556788999997
Q ss_pred CCCCcCCceEEEeCCCCC-----CCeEEEEcc--CCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCC
Q 021669 167 RKYEKGPFDIFSVGGDIS-----DANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 239 (309)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~-----~~~~v~~s~--dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 239 (309)
.+.+.. -......... .+..+..+| .+..+..++.++.+..+|..+++.+-..... ...... .+
T Consensus 206 ~tG~~~--w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~-----~~~~~~--~~ 276 (376)
T 3q7m_A 206 EQGQMI--WQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG-----SVNDFI--VD 276 (376)
T ss_dssp TTCCEE--EEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC-----CEEEEE--EE
T ss_pred CCCcEE--EEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC-----CCCCce--EE
Confidence 654320 0111110000 000000111 2455667778999999999999877554321 111222 35
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEee
Q 021669 240 GMFVISGSGDGSVYAWSVRSGKEVASWM 267 (309)
Q Consensus 240 g~~l~s~s~Dg~i~vwd~~~~~~~~~~~ 267 (309)
+..++.++.++.++.+|..+++.+-...
T Consensus 277 ~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 277 GNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp TTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 7788888899999999999998876654
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.12 E-value=1.4e-08 Score=83.70 Aligned_cols=200 Identities=11% Similarity=0.104 Sum_probs=132.1
Q ss_pred ccceEecCCCcc--eEEEEeCCCCCEEEEeeCCC--cEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCC
Q 021669 2 EVGMSFRDYNGR--ISSMDFHKSSSYLVTASDDE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 77 (309)
Q Consensus 2 ~~~~~~~~h~~~--V~~i~~s~~~~~l~t~s~D~--~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d 77 (309)
|+++++. |... ...+.|+ ++.+..+.+.++ +|+++|+.+|+.++.+..... .....+.++++.++... ..+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~~ly~lt--w~~ 106 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKDKIVGLT--WKN 106 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETTEEEEEE--SSS
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEEeCCEEEEEE--eeC
Confidence 5566663 4544 3689998 677888888877 999999999999888765432 22222333456666553 347
Q ss_pred ceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEE
Q 021669 78 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF 157 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (309)
+.+.++|.++.+.+..+.--. .-+.+ ++|++.|+.+..++.|.++|.++.+....+.+..
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~-eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~----------------- 166 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDG-EGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA----------------- 166 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSS-CCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEE-----------------
T ss_pred CEEEEEECccCcEEEEEECCC-CceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc-----------------
Confidence 899999999999888886422 22333 4677766666557889999998876655443210
Q ss_pred CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC---------C
Q 021669 158 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS---------R 228 (309)
Q Consensus 158 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~---------~ 228 (309)
++. + ....+.+.+. +|+.++..-.+..|.+.|..+++.+..+...... .
T Consensus 167 ~g~------------~---------~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~ 224 (262)
T 3nol_A 167 HGE------------E---------LPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPI 224 (262)
T ss_dssp TTE------------E---------CCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSC
T ss_pred CCc------------c---------ccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcC
Confidence 000 0 0112334444 7777776767889999999999999888753221 1
Q ss_pred CccceEEECCCCCEEEEEcC
Q 021669 229 NSTLEASFSPEGMFVISGSG 248 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~ 248 (309)
.....+||+|+++.|...+.
T Consensus 225 ~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEEcCCCCEEEEECC
Confidence 22356999998777666654
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.11 E-value=1.6e-07 Score=83.31 Aligned_cols=226 Identities=13% Similarity=0.110 Sum_probs=138.2
Q ss_pred CCCCEE-EEeeCCCcEEEEEcCCC----ceeeeeec-------cccceeEEEEecCCCEEEEEcCC---CCCceeEEEEc
Q 021669 21 KSSSYL-VTASDDESIRLYDVTAA----TCLKTINS-------KKYGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSL 85 (309)
Q Consensus 21 ~~~~~l-~t~s~D~~v~iWd~~~~----~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~s~~---g~d~~i~~~d~ 85 (309)
+++++| +++..+.+|.|.|+.+. +..++++. .......+.+.|++ .++++..+ +..+.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777765 67778999999999754 55566631 11123456777888 44433211 12378999999
Q ss_pred cCCceEEEeee--cc-cCEEEEEecCCCCeEEEec-------------------CCCcEEEeeCCCceeeeeeeecC---
Q 021669 86 HDNKYLRYFKG--HH-DRVVSLSLCSSKDCFISGS-------------------LDRTVLLWDQRAEKCQGLLRVQG--- 140 (309)
Q Consensus 86 ~~~~~~~~~~~--h~-~~v~~v~~~~~~~~l~s~s-------------------~Dg~v~~Wd~~~~~~~~~~~~~~--- 140 (309)
++++.+....- .. ..-..+.|+|+++.++++. .+.+|.+||+.+++....+.+..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99998887752 22 1234577899999999885 37899999999887777766531
Q ss_pred ce-eE--EECCCCcEEEE--E-----ECCEEEEEECCCCCcCCceEEEeCC-----C-----------CCCCeEEEEccC
Q 021669 141 RP-AA--AYDDQGLVFAV--A-----FGGYIRMFDARKYEKGPFDIFSVGG-----D-----------ISDANVVKFSND 194 (309)
Q Consensus 141 ~~-~~--~~~~~~~~~~~--~-----~~~~i~~~d~~~~~~~~~~~~~~~~-----~-----------~~~~~~v~~s~d 194 (309)
.+ .. .+++++.++.+ . .++.|.+|......-.......+.. . ......+.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 11 12 23666653333 3 3457765543211000000110000 0 133567899999
Q ss_pred CCEEEEEe-CCCcEEEEECC---CCeEeEEeeecCC---------C--CCccceEEECCCCCEEEEEc
Q 021669 195 GRLMLLTT-MEGHIHVLDSF---RGTLLSTYNVKPV---------S--RNSTLEASFSPEGMFVISGS 247 (309)
Q Consensus 195 g~~l~~~~-~dg~v~i~d~~---~~~~~~~~~~~~~---------~--~~~~~~~~~sp~g~~l~s~s 247 (309)
|++|.++. ..+.|.+||+. +.+++........ . ......+.++|||++|+.+.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99876554 57899999975 2355554443210 0 01245689999999999998
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.10 E-value=3.5e-08 Score=93.76 Aligned_cols=269 Identities=15% Similarity=0.146 Sum_probs=158.3
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeeccccc----------e-eEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKKYG----------V-DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
+..+..++.++.|.-+|..+|+.+..+...... + ...+. .+..+++++. |+.+..+|.++|+.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~---dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVL---DGRLEAIDAKTGQRA 144 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECT---TSEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEcc---CCEEEEEECCCCCEe
Confidence 556777788999999999999998776543210 0 01122 3456666543 789999999999998
Q ss_pred EEeeec--ccCEEEEEecC---CCCeEEEec-----CCCcEEEeeCCCceeeeeeeec-Cc-------------------
Q 021669 92 RYFKGH--HDRVVSLSLCS---SKDCFISGS-----LDRTVLLWDQRAEKCQGLLRVQ-GR------------------- 141 (309)
Q Consensus 92 ~~~~~h--~~~v~~v~~~~---~~~~l~s~s-----~Dg~v~~Wd~~~~~~~~~~~~~-~~------------------- 141 (309)
..+... ......+..+| ++..++..+ .|+.|..||.++++....+... ..
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred eeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 877642 11111111122 444444332 3799999999999876554320 00
Q ss_pred -------------eeEEECCCCcEEEEEE-CC-------------------EEEEEECCCCCcCCceEEEeCCCC-----
Q 021669 142 -------------PAAAYDDQGLVFAVAF-GG-------------------YIRMFDARKYEKGPFDIFSVGGDI----- 183 (309)
Q Consensus 142 -------------~~~~~~~~~~~~~~~~-~~-------------------~i~~~d~~~~~~~~~~~~~~~~~~----- 183 (309)
....+++...++..+. ++ .|..+|.++.+.. . .+....+.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~-W-~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV-W-HYQTTPGDAWDYT 302 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE-E-EEESSTTCCSCCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee-E-eeecCCccccccc
Confidence 1235555444444443 33 3888888765421 0 11111110
Q ss_pred --CCCeEEEEccCCC---EEEEEeCCCcEEEEECCCCeEeEEeeecCCC-------------------------------
Q 021669 184 --SDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS------------------------------- 227 (309)
Q Consensus 184 --~~~~~v~~s~dg~---~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~------------------------------- 227 (309)
.......+..+|+ .++.++.+|.++++|..+|+++......+..
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 1112222334665 7888899999999999999988543321100
Q ss_pred ----CCcc-ceEEECCCCCEEEEEcC---------------------------------------------CCcEEEEEC
Q 021669 228 ----RNST-LEASFSPEGMFVISGSG---------------------------------------------DGSVYAWSV 257 (309)
Q Consensus 228 ----~~~~-~~~~~sp~g~~l~s~s~---------------------------------------------Dg~i~vwd~ 257 (309)
.... ..++|+|+.+.+++.+. +|.|+.||+
T Consensus 383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 0001 12789999888877532 478999999
Q ss_pred CCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 258 RSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 258 ~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
.+++.+-....+. ....-.+...+.++..++.|.+++.+|.
T Consensus 463 ~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 463 VKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp TTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred CCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEEC
Confidence 9999887765543 2333344445555556676655554443
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.07 E-value=6.9e-09 Score=89.04 Aligned_cols=258 Identities=12% Similarity=0.127 Sum_probs=151.7
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEE
Q 021669 14 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY 93 (309)
Q Consensus 14 V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~ 93 (309)
..++.++.++. +..++.++.|..|| .+++.+.........+..+....++ .++.++ +. +..+|. +++.+..
T Consensus 22 ~~~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t----~~-l~~~d~-~g~~~~~ 92 (330)
T 3hxj_A 22 DSSPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDG-TIYFGS----DK-VYAINP-DGTEKWR 92 (330)
T ss_dssp CCCCEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTT-EECCSS----CE-EEEECC-CGGGGGG
T ss_pred ccCceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCC-cEEEec----Cc-EEEECC-CCcEEEE
Confidence 34455556664 55667889999999 8888776655444334444544444 344332 33 788886 5554443
Q ss_pred eeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecC--ceeEEECCCCcEEEEEECCEEEEEECCCCCc
Q 021669 94 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAVAFGGYIRMFDARKYEK 171 (309)
Q Consensus 94 ~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 171 (309)
+...........+. +..+..++.++.+..+|.+ ++......... .......+++.++.+..++.+..+|.. .+.
T Consensus 93 ~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~ 168 (330)
T 3hxj_A 93 FDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTE 168 (330)
T ss_dssp SCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCE
T ss_pred EECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCE
Confidence 33222222222333 4567778889999999987 55443333222 122344556677766667899999875 221
Q ss_pred CCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCc
Q 021669 172 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 251 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~ 251 (309)
..........+..+.+.++|.+++.. +.+..+| .+++.+..+.. ....+..+...++|+. ..++.++.
T Consensus 169 ----~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~---~~~~~~~~~~~~~g~l-~v~t~~~g 236 (330)
T 3hxj_A 169 ----KWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA---GYWTVTRPAISEDGTI-YVTSLDGH 236 (330)
T ss_dssp ----EEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC---SSCCCSCCEECTTSCE-EEEETTTE
T ss_pred ----eEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc---CCcceeceEECCCCeE-EEEcCCCe
Confidence 11121222345566777888866544 8899999 67766655442 2244566788888755 45666788
Q ss_pred EEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccc-eEEEeee
Q 021669 252 VYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS-ELSFWIP 297 (309)
Q Consensus 252 i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~-d~~~~~~ 297 (309)
+..+|. +++.+..+......+..+...+++++.+.... .+..+.+
T Consensus 237 l~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 237 LYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp EEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred EEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 999984 56666666554445566677777766655443 3544443
No 237
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=1.5e-07 Score=81.19 Aligned_cols=193 Identities=12% Similarity=0.064 Sum_probs=118.6
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec---c-ccceeEEEEecCCCEEEEEcCC-CCCceeEEEEc
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS---K-KYGVDLVCFTSHPTTVIYSSKN-GWDESLRLLSL 85 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~~~~~s~~-g~d~~i~~~d~ 85 (309)
...+.++.|+|+|+++++. . ..|.+||..+++....... . ...+..+++.+++...+..... .......+|.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 4578999999999887765 3 4599999988765432211 1 2346788899988754433210 00122344444
Q ss_pred cCCceEEEeeecccCEEEEEecCCCCeE-EEecCCCcEEEeeCC--Cc-eeeeeeeecCceeEEECCCCcEEEEEECCEE
Q 021669 86 HDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQR--AE-KCQGLLRVQGRPAAAYDDQGLVFAVAFGGYI 161 (309)
Q Consensus 86 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~Dg~v~~Wd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (309)
.+++ +..+..+......++|+||++.+ ++.+.++.|.+||+. ++ .... . ..+
T Consensus 167 ~~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~------~---------~~~-------- 222 (326)
T 2ghs_A 167 AKGK-VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK------A---------EVF-------- 222 (326)
T ss_dssp ETTE-EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC------C---------EEE--------
T ss_pred eCCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC------c---------eEE--------
Confidence 3444 33343444567899999999865 555667899999875 33 2100 0 000
Q ss_pred EEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEEC-CCC
Q 021669 162 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS-PEG 240 (309)
Q Consensus 162 ~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~s-p~g 240 (309)
.+.. ........++++++|.+.++...++.|.+||. +++.+..+.. +...+.+++|+ |++
T Consensus 223 --~~~~-------------~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~---~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 223 --IDST-------------GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV---PGKQTTCPAFIGPDA 283 (326)
T ss_dssp --EECT-------------TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC---SCSBEEEEEEESTTS
T ss_pred --EECC-------------CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC---CCCCcEEEEEecCCC
Confidence 0000 00011246788999998888777889999998 5776666553 23457789998 898
Q ss_pred CEEEEEcC
Q 021669 241 MFVISGSG 248 (309)
Q Consensus 241 ~~l~s~s~ 248 (309)
+.|+.++.
T Consensus 284 ~~L~vt~~ 291 (326)
T 2ghs_A 284 SRLLVTSA 291 (326)
T ss_dssp CEEEEEEB
T ss_pred CEEEEEec
Confidence 87755543
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=4.3e-08 Score=89.75 Aligned_cols=239 Identities=8% Similarity=0.049 Sum_probs=153.9
Q ss_pred CCCCEEEEee-CCCcEEEEEcCCCceeeeeecc-ccceeEEEE-e-cCCCEEEEEcC---------------CCCCceeE
Q 021669 21 KSSSYLVTAS-DDESIRLYDVTAATCLKTINSK-KYGVDLVCF-T-SHPTTVIYSSK---------------NGWDESLR 81 (309)
Q Consensus 21 ~~~~~l~t~s-~D~~v~iWd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~~~~~s~---------------~g~d~~i~ 81 (309)
+||+++.... .+..|.+-|+.+.++.+.+.-. ......+++ + |+++++++++. +.+++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 4888765544 4667999999999998844321 123566676 4 88888877731 12367899
Q ss_pred EEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCC--------------------------------------cEE
Q 021669 82 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR--------------------------------------TVL 123 (309)
Q Consensus 82 ~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg--------------------------------------~v~ 123 (309)
+.|.++.+.+..+.--. ....++++|||+++.+.+.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999988776654211 345677899999888877553 466
Q ss_pred EeeCCC--cee-eeeeeecCc-eeEEECCCCcEEEEEE--CCEEEEEECCCCCc-------CCceE-EEeCCCCCCCeEE
Q 021669 124 LWDQRA--EKC-QGLLRVQGR-PAAAYDDQGLVFAVAF--GGYIRMFDARKYEK-------GPFDI-FSVGGDISDANVV 189 (309)
Q Consensus 124 ~Wd~~~--~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~i~~~d~~~~~~-------~~~~~-~~~~~~~~~~~~v 189 (309)
+.|.++ ++. ...+..... ..+.+++++.++.++. ++.+.++|+.+.+. ....+ ..+. --....-+
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~ 336 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT 336 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceE
Confidence 667665 332 333433322 2467788887666664 58999999875320 00001 1111 11245778
Q ss_pred EEccCCCEEEEEeCCCcEEEEECCC----------CeEeEEeeecCC--CCCccceEEECCCCCEEEEE---cCCCcE--
Q 021669 190 KFSNDGRLMLLTTMEGHIHVLDSFR----------GTLLSTYNVKPV--SRNSTLEASFSPEGMFVISG---SGDGSV-- 252 (309)
Q Consensus 190 ~~s~dg~~l~~~~~dg~v~i~d~~~----------~~~~~~~~~~~~--~~~~~~~~~~sp~g~~l~s~---s~Dg~i-- 252 (309)
+|+|+|..+++...|++|.+||+.+ ...+.+...+.+ |........++|||++|+++ +.|+.+
T Consensus 337 aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~ 416 (595)
T 1fwx_A 337 AFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNV 416 (595)
T ss_dssp EECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCC
T ss_pred EECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccC
Confidence 9999997777888999999999876 455665554322 22222345678999999998 335532
Q ss_pred --------EEEECCCCc
Q 021669 253 --------YAWSVRSGK 261 (309)
Q Consensus 253 --------~vwd~~~~~ 261 (309)
.++|+..++
T Consensus 417 gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 417 GPLKPENDQLIDISGDK 433 (595)
T ss_dssp CSSCCEEEEEEECSSSS
T ss_pred CCCCCCcceEEEcCCCc
Confidence 889996544
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.03 E-value=3e-06 Score=70.50 Aligned_cols=248 Identities=12% Similarity=0.042 Sum_probs=146.9
Q ss_pred CEEEEeeCCCcEEEEEcCCCcee-----eeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecc
Q 021669 24 SYLVTASDDESIRLYDVTAATCL-----KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 98 (309)
Q Consensus 24 ~~l~t~s~D~~v~iWd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~ 98 (309)
.+|+-+.. +.|+.+|++..... ..+.........+++.+++..++++.. .++.|..+++..+.....+....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET--TTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEECCC
Confidence 34444443 47888888754321 112222234567889888778877653 26789999987665433333333
Q ss_pred cCEEEEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeeec-Cc-eeEEECC-CCcEEEEEE---CCEEEEEECCCCCc
Q 021669 99 DRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQ-GR-PAAAYDD-QGLVFAVAF---GGYIRMFDARKYEK 171 (309)
Q Consensus 99 ~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~---~~~i~~~d~~~~~~ 171 (309)
.....+++.++++ ..++-...+.|.++++............ .. ...++++ .+.++.+.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~- 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN- 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence 5788999998654 5566667789999987643322222111 12 2345665 455444443 3578888764311
Q ss_pred CCceEEEeCCCCCCCeEEEEccCCC-EEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCC
Q 021669 172 GPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 250 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg 250 (309)
.... ..........++++|++. ++++....+.|.++|............ . .....++.. ++..+++-...+
T Consensus 158 --~~~~-~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~---~-~~P~gi~~d-~~~lyva~~~~~ 229 (267)
T 1npe_A 158 --RRIL-AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG---L-QYPFAVTSY-GKNLYYTDWKTN 229 (267)
T ss_dssp --CEEE-ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC---C-CSEEEEEEE-TTEEEEEETTTT
T ss_pred --cEEE-EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC---C-CCceEEEEe-CCEEEEEECCCC
Confidence 1111 112233567899999765 556666778999999865433322221 1 222345543 344444445668
Q ss_pred cEEEEECCCCceEEEeecCC-CCCcEEEECCCee
Q 021669 251 SVYAWSVRSGKEVASWMSFD-TEPPVIKWTPGSL 283 (309)
Q Consensus 251 ~i~vwd~~~~~~~~~~~~~~-~~v~~l~~~p~~~ 283 (309)
.|.++|..+++.+.++.... ..+..+++.|++.
T Consensus 230 ~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 230 SVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred eEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 99999999998888875432 2467888888764
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.02 E-value=9.1e-08 Score=78.90 Aligned_cols=198 Identities=10% Similarity=0.055 Sum_probs=129.1
Q ss_pred ccceEecCCCcc--eEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCce
Q 021669 2 EVGMSFRDYNGR--ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 79 (309)
Q Consensus 2 ~~~~~~~~h~~~--V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 79 (309)
|++.++. |... ...+.|+. +.+..+.+.++.|+++|+.+++.++.+ ... ........++++.++... ..++.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~~Ly~lt--w~~~~ 117 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGERLYQLT--WTEGL 117 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSSCEEEEE--SSSCE
T ss_pred EEEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCCEEEEEE--ccCCE
Confidence 4556663 4433 36888884 677889999999999999999998877 322 222222334555665553 34789
Q ss_pred eEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECC
Q 021669 80 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG 159 (309)
Q Consensus 80 i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (309)
+.++|.++.+.+.++.-- ..-++++ +|++.|+.+..++.|.++|.++.+....+.+... +
T Consensus 118 v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~-----------------g 177 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR-----------------G 177 (268)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEET-----------------T
T ss_pred EEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC-----------------C
Confidence 999999999988888742 3334444 5677777666688999999988776554433210 0
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC----------CCC
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV----------SRN 229 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~----------~~~ 229 (309)
. .....+.+.+. +|+.++..-.+..|.+.|..+++.+..+..... ...
T Consensus 178 --------------~-------~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 178 --------------Q-------PVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp --------------E-------ECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred --------------c-------ccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 0 00112334444 777776666788999999999999988775311 112
Q ss_pred ccceEEECCCCCEEEEEc
Q 021669 230 STLEASFSPEGMFVISGS 247 (309)
Q Consensus 230 ~~~~~~~sp~g~~l~s~s 247 (309)
....+||+|+++.|+..+
T Consensus 236 vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CEEEEEECTTTCCEEEEE
T ss_pred ceEEEEEcCCCCEEEEeC
Confidence 335699999765444433
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.02 E-value=1e-07 Score=87.35 Aligned_cols=256 Identities=11% Similarity=0.059 Sum_probs=161.3
Q ss_pred EEEeeCCCcEEEEEcCCCceeeeee-----------------------------------cc-cc---ceeEEEEec---
Q 021669 26 LVTASDDESIRLYDVTAATCLKTIN-----------------------------------SK-KY---GVDLVCFTS--- 63 (309)
Q Consensus 26 l~t~s~D~~v~iWd~~~~~~~~~~~-----------------------------------~~-~~---~v~~~~~~~--- 63 (309)
+.||+.-|.++|+-+.+++.++.+. +. .. ......++.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 7899999999999998887765421 00 00 011234444
Q ss_pred --CCCEEEEEcCCCCCceeEEEEccCCceEEEeeec-ccCEEEEEe-c-CCCCeEEEec------------------CCC
Q 021669 64 --HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH-HDRVVSLSL-C-SSKDCFISGS------------------LDR 120 (309)
Q Consensus 64 --~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h-~~~v~~v~~-~-~~~~~l~s~s------------------~Dg 120 (309)
|+++++.... .+..|.+.|+.+.+..+.+.-- ......+.+ . |+++++..++ .++
T Consensus 98 ~~DG~~lfVnd~--~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 98 KYDGRFLFMNDK--ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEEET--TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CcCCCEEEEEcC--CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 6666666543 2678999999999987755421 235778887 4 8998887774 356
Q ss_pred cEEEeeCCCceeeeeeeecCce-eEEECCCCcEEEEEE-C--------------------------------------CE
Q 021669 121 TVLLWDQRAEKCQGLLRVQGRP-AAAYDDQGLVFAVAF-G--------------------------------------GY 160 (309)
Q Consensus 121 ~v~~Wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~--------------------------------------~~ 160 (309)
.+-+.|.++.+....+.+.+.+ ....++++.++.++. + +.
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 8899999988887777664432 344555555444333 1 12
Q ss_pred EEEEECCCCCcCC-ceEEEeCCCCCCCeEEEEccCCCEEEEEe-CCCcEEEEECCCCe------------EeEEeeecCC
Q 021669 161 IRMFDARKYEKGP-FDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGT------------LLSTYNVKPV 226 (309)
Q Consensus 161 i~~~d~~~~~~~~-~~~~~~~~~~~~~~~v~~s~dg~~l~~~~-~dg~v~i~d~~~~~------------~~~~~~~~~~ 226 (309)
+.+.|.++.+... ....... .....+.+||||+++..++ .+.+|.++|..+.+ ...+..
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~---- 328 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE---- 328 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB----
T ss_pred EEEEeCcccCCceeEEEEecC---CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC----
Confidence 5555554421111 1112221 1235688999999776654 68999999988642 222222
Q ss_pred CCCccceEEECCCCCEEEEEcCCCcEEEEECCC----------CceEEEeecCCCC-----CcEEEECCCeeEEEEccc
Q 021669 227 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS----------GKEVASWMSFDTE-----PPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~----------~~~~~~~~~~~~~-----v~~l~~~p~~~~l~s~~~ 290 (309)
......-++|+|+|+-..+.-.|+.|.+||+.+ .+.+.++..|-.+ -..+..+|||++|++...
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 123356789999995556678899999999977 4455565544321 123456899998877653
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.96 E-value=1.1e-07 Score=79.04 Aligned_cols=194 Identities=14% Similarity=0.111 Sum_probs=130.3
Q ss_pred CEEEEEecCCCCeEEEecC--CCcEEEeeCCCceeeeeeeecCce---eEEECCCCcEEEEE-ECCEEEEEECCCCCcCC
Q 021669 100 RVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVA-FGGYIRMFDARKYEKGP 173 (309)
Q Consensus 100 ~v~~v~~~~~~~~l~s~s~--Dg~v~~Wd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~ 173 (309)
....+.|++++...++.+. ++.|++.|+++++....+.+.... ..... .+.++.+. .++.+.++|..+++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v-- 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSN-- 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEE--
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcE--
Confidence 3678999998766666554 689999999999988776554321 22333 23444444 468999999875432
Q ss_pred ceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC--CCCccceEEECCCCCEEEEEcCCCc
Q 021669 174 FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGS 251 (309)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~--~~~~~~~~~~sp~g~~l~s~s~Dg~ 251 (309)
...+... ... ...+++||+.+..+..+++|+++|..+.+.+.+...... .......+.|. +|+.++....++.
T Consensus 99 ~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 99 IKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 2222222 111 234677887666666789999999999888877664311 11124567787 7876677667899
Q ss_pred EEEEECCCCceEEEeecC-----------C--CCCcEEEECCCe-eEEEEccceEEEeeecCCC
Q 021669 252 VYAWSVRSGKEVASWMSF-----------D--TEPPVIKWTPGS-LMFVTGSSELSFWIPDLSK 301 (309)
Q Consensus 252 i~vwd~~~~~~~~~~~~~-----------~--~~v~~l~~~p~~-~~l~s~~~d~~~~~~~~~~ 301 (309)
|.+.|..+++.+..+..- . ...+.|+|+|++ ++++++...-+++..++..
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 999999999988876421 0 245789999986 6778887766666665543
No 243
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.95 E-value=3.3e-07 Score=86.68 Aligned_cols=270 Identities=10% Similarity=0.037 Sum_probs=150.2
Q ss_pred EEEeCC-CCCEEEEeeCCC-----------cEEEEEcCCCceeee--eec-cccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 16 SMDFHK-SSSYLVTASDDE-----------SIRLYDVTAATCLKT--INS-KKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 16 ~i~~s~-~~~~l~t~s~D~-----------~v~iWd~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
.+++.| ++++++.|+.+. .+.+||..+++-... +.. +......+++..++..++++... +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~--~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND--AKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS--TTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC--CCce
Confidence 456667 888999988654 588999988764332 211 12223345666777766665432 4589
Q ss_pred EEEEccCCceEEEeeecccCE-EEEEecCCCCeEEEec-CC-----CcEEEeeCCCceeeeee-----eecC-ceeEEEC
Q 021669 81 RLLSLHDNKYLRYFKGHHDRV-VSLSLCSSKDCFISGS-LD-----RTVLLWDQRAEKCQGLL-----RVQG-RPAAAYD 147 (309)
Q Consensus 81 ~~~d~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~s-~D-----g~v~~Wd~~~~~~~~~~-----~~~~-~~~~~~~ 147 (309)
.+||..+++-...-.-+..+- .++...++++.++.|+ .+ ..+.+||+++++....- .+.. .....+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 999998775332222122221 2445567899999998 45 57999999887654320 1100 0000111
Q ss_pred CCCc-EEEEEE---------CCEEEEEECCCCCcCCceEEEeCC-------CCCCCeEEEEc-cCCCEEEEEeCCC----
Q 021669 148 DQGL-VFAVAF---------GGYIRMFDARKYEKGPFDIFSVGG-------DISDANVVKFS-NDGRLMLLTTMEG---- 205 (309)
Q Consensus 148 ~~~~-~~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~~v~~s-~dg~~l~~~~~dg---- 205 (309)
..+. ++.++. ...+..||.....- ........ ......++.+. .++++++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w--~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD--VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE--EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcce--eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC
Confidence 1222 222222 34677888754321 01111000 01123444554 3788888888543
Q ss_pred -------cEEEEECCCCeEeEEeeecCCCCCcc-ceEEECCCCCEEEEEcCC-----------CcEEEEECCCCceE--E
Q 021669 206 -------HIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEGMFVISGSGD-----------GSVYAWSVRSGKEV--A 264 (309)
Q Consensus 206 -------~v~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~sp~g~~l~s~s~D-----------g~i~vwd~~~~~~~--~ 264 (309)
.|.+||..+..-.... ......... ..+...|+|+.++.||.+ ..+.+||..+.+-. .
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred CcCCcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 6778887766543322 011122222 345677899999999865 46899999775432 2
Q ss_pred EeecCCCCCcEEEECCCeeEEEEccc
Q 021669 265 SWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 265 ~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
.+........+..+.|+++.++.|+.
T Consensus 505 ~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 505 PNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCccccccHhhcCCCcEEEecCCC
Confidence 22211122334557899999999884
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.94 E-value=6.5e-07 Score=73.11 Aligned_cols=200 Identities=11% Similarity=0.094 Sum_probs=128.8
Q ss_pred ccceEecCCCcc--eEEEEeCCCCCEEEEeeCCC--cEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCC
Q 021669 2 EVGMSFRDYNGR--ISSMDFHKSSSYLVTASDDE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 77 (309)
Q Consensus 2 ~~~~~~~~h~~~--V~~i~~s~~~~~l~t~s~D~--~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d 77 (309)
|++.++ -|... ...+.|++ +.+..|.+.++ +|+.+|+.+|+.++.+...... ....+...++.++... ..+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~~~ly~lt--w~~ 84 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWRDRLIQLT--WRN 84 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEE--SSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeCCEEEEEE--eeC
Confidence 456666 35543 56899997 66777877764 9999999999998877543321 1122223355665543 347
Q ss_pred ceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEE
Q 021669 78 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF 157 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (309)
+.+.++|.++.+.+.++.-- ..-+++ +++++.|+.+..++.|.++|.++.+....+.+...
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~-~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~---------------- 145 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYP-GEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAG---------------- 145 (243)
T ss_dssp SEEEEEETTTTEEEEEEECS-SCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEET----------------
T ss_pred CEEEEEECCcCcEEEEEeCC-CCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccC----------------
Confidence 89999999999988888643 232444 45666666555688999999988766554433210
Q ss_pred CCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC---------C
Q 021669 158 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS---------R 228 (309)
Q Consensus 158 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~---------~ 228 (309)
+ .. ...++.+.+. +|+.++..-.+..|.+.|+.+++.+..+...... .
T Consensus 146 -g--------------~~-------~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~ 202 (243)
T 3mbr_X 146 -G--------------RP-------LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDST 202 (243)
T ss_dssp -T--------------EE-------CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTT
T ss_pred -C--------------cc-------cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCc
Confidence 0 00 0112233333 6777766667789999999999999888754221 1
Q ss_pred -CccceEEECCCCCEEEEEcC
Q 021669 229 -NSTLEASFSPEGMFVISGSG 248 (309)
Q Consensus 229 -~~~~~~~~sp~g~~l~s~s~ 248 (309)
.....++|+|+++.|...+.
T Consensus 203 ~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 203 NDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp SSCEEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEcCCCCEEEEECC
Confidence 23356999998766555543
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.92 E-value=5.3e-06 Score=71.09 Aligned_cols=237 Identities=11% Similarity=0.100 Sum_probs=144.4
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec--------------------cccceeEEEEecCCCEEEEEc
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS--------------------KKYGVDLVCFTSHPTTVIYSS 72 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~~~~~s 72 (309)
...+++++++++++.++..++.|..||..+++.. .+.. ....+..+++.++...++.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3557889999987888888999999988765432 2210 012356678876334455543
Q ss_pred CCCCCceeEEEEccCCceEEEeee-----cccCEEEEEecC-CCCeEEEecC-----------------CCcEEEeeCCC
Q 021669 73 KNGWDESLRLLSLHDNKYLRYFKG-----HHDRVVSLSLCS-SKDCFISGSL-----------------DRTVLLWDQRA 129 (309)
Q Consensus 73 ~~g~d~~i~~~d~~~~~~~~~~~~-----h~~~v~~v~~~~-~~~~l~s~s~-----------------Dg~v~~Wd~~~ 129 (309)
. .+.+..+|..+++ +..+.. .......+.+.+ +|+..++-.. ++.|..+|..+
T Consensus 99 ~---~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 99 C---YYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp T---TTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred C---CCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 2 2347888876553 222221 123578899999 8987666432 36788888876
Q ss_pred ceeeeeee-ecCceeEEECCCCcEEEEE--ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC---
Q 021669 130 EKCQGLLR-VQGRPAAAYDDQGLVFAVA--FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM--- 203 (309)
Q Consensus 130 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~--- 203 (309)
++...... ...-...++++++..+..+ ..+.|..|++.....+....+.. ... ...++++++|+++++...
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEEETT
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecCccc
Confidence 65432221 1222346777777644444 35789999986432222232221 112 567899999998877655
Q ss_pred -------CCcEEEEECCCCeEeEEeeecCCC-CCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 204 -------EGHIHVLDSFRGTLLSTYNVKPVS-RNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 204 -------dg~v~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
.+.|..+|. .++.+..+...... ...+..+++ .+++.+++....+.|.++++..
T Consensus 252 ~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 567888987 47777666543211 233445666 4677666667788899998853
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=8.3e-06 Score=78.75 Aligned_cols=274 Identities=13% Similarity=0.173 Sum_probs=165.7
Q ss_pred eEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee-ccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEE
Q 021669 14 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 14 V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~ 92 (309)
|.++..++++.+.+ +..++.+..||..+++...... .....+..+...+++...+ +.. ++-+..||..+++...
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~---~~Gl~~~~~~~~~~~~ 249 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATE---GAGLFLINPKTKEIKN 249 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEB---SSCEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EEC---CCCeEEEeCCCCeEEE
Confidence 88888888887665 5555568899987765433221 1233466666655554333 332 2348889987765443
Q ss_pred Eeee-------cccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee---------cCceeEEECCCCcEEEEE
Q 021669 93 YFKG-------HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------QGRPAAAYDDQGLVFAVA 156 (309)
Q Consensus 93 ~~~~-------h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 156 (309)
.... ....|.++...++++.. .|..+ -+.+||..+++....... ........+..+.+..+.
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt 327 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGT 327 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEE
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEE
Confidence 3222 13569999888777644 34445 578889877654432211 112234556677888777
Q ss_pred ECCEEEEEECCCCCcCCceEEEeC-----CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeec-----CC
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-----PV 226 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-----~~ 226 (309)
.++.|..++.... .+..+... .....|.++...++|.+. .|+.++-+..||..++......... ..
T Consensus 328 ~~~Gl~~~~~~~~---~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 328 YFGGLNYYHPIRN---RFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp SSSCEEEECGGGG---SSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CC
T ss_pred CCCCeEEeCCCcc---cceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 7778888875432 22222111 112357888888888755 4667777889998776543321110 12
Q ss_pred CCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeec-----CCCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 227 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS-----FDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~-----~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
....|.++...++|+.|..|+.++.+.+||..+++. ..+.. ....|.++...+++++.+.....+..+.++.
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~ 480 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQ 480 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTT
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCC
Confidence 235677788888888566677777799999987653 33321 2346778888888876655545566665543
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.89 E-value=2.8e-07 Score=75.95 Aligned_cols=187 Identities=13% Similarity=0.094 Sum_probs=123.7
Q ss_pred EEEEEecCCCCeEEEecCCC--cEEEeeCCCceeeeeeeecCce---eEEECCCCcEEEEE-ECCEEEEEECCCCCcCCc
Q 021669 101 VVSLSLCSSKDCFISGSLDR--TVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPF 174 (309)
Q Consensus 101 v~~v~~~~~~~~l~s~s~Dg--~v~~Wd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~ 174 (309)
...+.|+ ++....+.+.+| .|+..|+++++....+.+.... ...... +.++.+. .++.+.+||..+++. .
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~ltw~~~~v~v~D~~t~~~--~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK-DKIVGLTWKNGLGFVWNIRNLRQ--V 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTCCE--E
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC-CEEEEEEeeCCEEEEEECccCcE--E
Confidence 4788888 677778888776 9999999999988777655432 123333 3444443 478999999876542 2
Q ss_pred eEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC--CCCccceEEECCCCCEEEEEcCCCcE
Q 021669 175 DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGSV 252 (309)
Q Consensus 175 ~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~--~~~~~~~~~~sp~g~~l~s~s~Dg~i 252 (309)
..+...+. ...+++|++.|..+..+++|+++|..+.+.+.+...... ....+..+.|. +|+.++..-.+..|
T Consensus 121 ~ti~~~~e-----G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 121 RSFNYDGE-----GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp EEEECSSC-----CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEECCCC-----ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 22233221 123456777766666688999999999988887665311 11223346775 78777777778899
Q ss_pred EEEECCCCceEEEeecC------------CCCCcEEEECCCe-eEEEEccceEEEeee
Q 021669 253 YAWSVRSGKEVASWMSF------------DTEPPVIKWTPGS-LMFVTGSSELSFWIP 297 (309)
Q Consensus 253 ~vwd~~~~~~~~~~~~~------------~~~v~~l~~~p~~-~~l~s~~~d~~~~~~ 297 (309)
.+.|.++++.+..+..- ....+.|||+|++ +++++|-.=-++|..
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 99999999987776421 1234779999975 566776542334433
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.89 E-value=4.7e-07 Score=74.68 Aligned_cols=189 Identities=13% Similarity=0.027 Sum_probs=126.2
Q ss_pred CEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCce---eEEECCCCcEEEEEECCEEEEEECCCCCcCCceE
Q 021669 100 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDI 176 (309)
Q Consensus 100 ~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 176 (309)
....+.|+ ++...++.+.+|.|+..|+++++....+ +.... ......+..+.+.-.++.+.+||..+++. ...
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~--~~t 131 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR--ERT 131 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE--EEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE--EEE
Confidence 34788887 4567788899999999999999887766 55432 23444444444433578999999876542 122
Q ss_pred EEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC--CCCccceEEECCCCCEEEEEcCCCcEEE
Q 021669 177 FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGSVYA 254 (309)
Q Consensus 177 ~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~--~~~~~~~~~~sp~g~~l~s~s~Dg~i~v 254 (309)
+...+. - ..+++|++.|..+..+++|+++|..+.+.+.+...... ....+..+.|. +|+.++....+..|.+
T Consensus 132 i~~~~e---G--wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 132 TRYSGE---G--WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp EECSSC---C--CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EeCCCc---e--eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEE
Confidence 233221 1 23446788777777799999999999988887764321 11233456676 8877777777889999
Q ss_pred EECCCCceEEEeecC-------------CCCCcEEEECCC-eeEEEEccceEEEeeec
Q 021669 255 WSVRSGKEVASWMSF-------------DTEPPVIKWTPG-SLMFVTGSSELSFWIPD 298 (309)
Q Consensus 255 wd~~~~~~~~~~~~~-------------~~~v~~l~~~p~-~~~l~s~~~d~~~~~~~ 298 (309)
.|.++++.+..+..- ....+.|||+|+ .++|++|-.=-++|...
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 999999987765321 124577999996 46778776433344433
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.86 E-value=2e-06 Score=81.43 Aligned_cols=259 Identities=12% Similarity=0.113 Sum_probs=154.1
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeeccc----cceeEEEEecCCCEEEEEcCC---CCCceeEEEEccCCceEEEee
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKK----YGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYFK 95 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~s~~---g~d~~i~~~d~~~~~~~~~~~ 95 (309)
+..++.++.|+.|..+|..+|+.+..+.... ..+...-.. .+..++++..+ +.++.+..+|.++|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4577788899999999999999887665421 111110000 13355554322 135899999999999988875
Q ss_pred ecc---c----------------------------CEEEEEecCCCCeEEEecCCC-------------------cEEEe
Q 021669 96 GHH---D----------------------------RVVSLSLCSSKDCFISGSLDR-------------------TVLLW 125 (309)
Q Consensus 96 ~h~---~----------------------------~v~~v~~~~~~~~l~s~s~Dg-------------------~v~~W 125 (309)
... . ....+++.++.+.+..++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 0 011356777777777777665 39999
Q ss_pred eCCCceeeeeeeecCc---------eeEEE--CCCCc----EEEEEECCEEEEEECCCCCcC------Cce-EEEeC---
Q 021669 126 DQRAEKCQGLLRVQGR---------PAAAY--DDQGL----VFAVAFGGYIRMFDARKYEKG------PFD-IFSVG--- 180 (309)
Q Consensus 126 d~~~~~~~~~~~~~~~---------~~~~~--~~~~~----~~~~~~~~~i~~~d~~~~~~~------~~~-~~~~~--- 180 (309)
|.++++.......... +.... ..++. ++....+|.++++|.++.+.- ... ...+.
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 9999988766554211 11111 11232 444446788899887654310 000 00000
Q ss_pred ------------C--------CC--CCCeEEEEccCCCEEEEEe------------------------------------
Q 021669 181 ------------G--------DI--SDANVVKFSNDGRLMLLTT------------------------------------ 202 (309)
Q Consensus 181 ------------~--------~~--~~~~~v~~s~dg~~l~~~~------------------------------------ 202 (309)
+ .. ..-..++++|+...+....
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 0 00 0011257788765544311
Q ss_pred CCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCC-cEEEECCC
Q 021669 203 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPG 281 (309)
Q Consensus 203 ~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v-~~l~~~p~ 281 (309)
.+|.|+.||+.+++.+=..... .......+...|..++.++.|+.+++||.++++.+..+....... .-+.+..+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYP----THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ccceEEEEeCCCCcEEEEccCC----CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 2378999999999987555432 122233455678899999999999999999999988876543222 23555566
Q ss_pred eeEEE
Q 021669 282 SLMFV 286 (309)
Q Consensus 282 ~~~l~ 286 (309)
+++.+
T Consensus 512 G~~yv 516 (668)
T 1kv9_A 512 GRQYV 516 (668)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 66443
No 250
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.85 E-value=1.3e-09 Score=95.82 Aligned_cols=227 Identities=12% Similarity=0.097 Sum_probs=110.6
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeecccc-ceeE-EEEecCCCEEEEEcCCCCCceeEEEEccCCc
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY-GVDL-VCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 89 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~-~v~~-~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~ 89 (309)
+++.+..+.+++..+++++.|+.|..||..+|+.+..+..+.. .+.. .++. .+..+++++ .|+.+..||.++|+
T Consensus 38 ~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~---~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 38 DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGK---KQDIWYVIDLLTGE 113 (369)
T ss_dssp CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCE---EEEEEEEECCC---
T ss_pred CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEe---CCCEEEEEECCCCc
Confidence 3444555566777888889999999999999988766654321 1111 0111 233444433 37899999999999
Q ss_pred eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECC----CCcEEEEEECCEEEEEE
Q 021669 90 YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDD----QGLVFAVAFGGYIRMFD 165 (309)
Q Consensus 90 ~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~d 165 (309)
.++.+..+. ...++|+++.+++++.|+.++.||.++++....+............ ++.++.+..++.++.||
T Consensus 114 ~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 114 KQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp -----------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred EEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEEE
Confidence 888877654 2345678888999999999999999988765544322211112222 25677777789999999
Q ss_pred CCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEE--EeCCCcEEEEECCCCe----EeEEeeecCCCCCccceEEECC-
Q 021669 166 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL--TTMEGHIHVLDSFRGT----LLSTYNVKPVSRNSTLEASFSP- 238 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~--~~~dg~v~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~sp- 238 (309)
.++.+. .........-+....++++|...+. ...++.++.+|..+|+ .+-.+... ..+ . +|
T Consensus 190 ~~tG~~----~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~tG~~~~~~~W~~~~~----~~~---~-sp~ 257 (369)
T 2hz6_A 190 SESGDV----LWIQNYASPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYPFP----KET---E-AKS 257 (369)
T ss_dssp TTTCCE----EEEEECSSCEEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHHHHHHHTSCCCCC----CHH---H-HHH
T ss_pred CCCCcE----EEEecCCCceEEEEEecCCceEeccceeecccceeeeehhcCCcccceeeeeccC----ccc---c-ccc
Confidence 876432 2222111111223445566643211 0113445566655554 22111110 111 1 22
Q ss_pred -CCCEEEEEcCCCcEEEEECC
Q 021669 239 -EGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 239 -~g~~l~s~s~Dg~i~vwd~~ 258 (309)
.+..|+.++.||.++.++..
T Consensus 258 ~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 258 KLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HSEEEECBEECSSCEECCEEE
T ss_pred cccceEEEecccCCEEecCcc
Confidence 35678888899999999886
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.84 E-value=2.6e-05 Score=75.23 Aligned_cols=271 Identities=10% Similarity=0.125 Sum_probs=165.0
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec--------cccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS--------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
...|.++..+++|.+-+ |..++-|..||..+++..+-... ....|..++..+++..+..+.. ++-+..
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~---~~Gl~~ 431 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH---AGGLSI 431 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET---TTEEEE
T ss_pred CCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC---cCceeE
Confidence 35699999999887654 66777899999877654332211 1234677777666662444432 346899
Q ss_pred EEccCCceEEEee----ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee--------cCceeEEECCCC
Q 021669 83 LSLHDNKYLRYFK----GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--------QGRPAAAYDDQG 150 (309)
Q Consensus 83 ~d~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~--------~~~~~~~~~~~~ 150 (309)
+|..+++...... .+...|.++...++++..+.. .+ -+.+||.++++....... ........+.++
T Consensus 432 ~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 432 LHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp EETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred EeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 9988776433221 234578999888877654443 44 577889877654432211 111233455667
Q ss_pred cEEEEEECCEEEEEECCCCCcCCceEEEe-----CCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeee-c
Q 021669 151 LVFAVAFGGYIRMFDARKYEKGPFDIFSV-----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV-K 224 (309)
Q Consensus 151 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~-~ 224 (309)
.+..+.. +.+..||..... + .+.. ......+.++..+++|++.++.. . -+..||..++.... +.. .
T Consensus 510 ~lWigt~-~Gl~~~~~~~~~---~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~-~~~~~ 581 (795)
T 4a2l_A 510 RLWIGGE-EGLSVFKQEGLD---I-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKR-YNTTN 581 (795)
T ss_dssp CEEEEES-SCEEEEEEETTE---E-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEE-ECGGG
T ss_pred CEEEEeC-CceEEEeCCCCe---E-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEE-eCCCC
Confidence 7766665 568888764321 1 1110 01123577888889998765543 3 57889987765443 322 2
Q ss_pred CCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCC----C--cEEEECCCeeEEEEccceEEEeeec
Q 021669 225 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTE----P--PVIKWTPGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 225 ~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~----v--~~l~~~p~~~~l~s~~~d~~~~~~~ 298 (309)
......+.++...++|+..+++ ++.|..||..+++ +..+....+- . .++...++|++++.+...+..+.|+
T Consensus 582 gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~-~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~Gl~~~~p~ 658 (795)
T 4a2l_A 582 GLPNNVVYGILEDSFGRLWLST--NRGISCFNPETEK-FRNFTESDGLQSNQFNTASYCRTSVGQMYFGGINGITTFRPE 658 (795)
T ss_dssp TCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTE-EEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTEEEEECGG
T ss_pred CCchhheEEEEECCCCCEEEEc--CCceEEEcCCCCc-EEEcCCcCCCccccCccCceeECCCCeEEEecCCceEEEcHH
Confidence 2233456778888899887776 3558899997654 4444333221 1 3567788998888877776666664
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.79 E-value=4e-05 Score=65.09 Aligned_cols=236 Identities=13% Similarity=0.032 Sum_probs=135.9
Q ss_pred ceEecCCCcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCC-ceeEE
Q 021669 4 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-ESLRL 82 (309)
Q Consensus 4 ~~~~~~h~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d-~~i~~ 82 (309)
..+|... .....++|+++|+++++-..++.|..||.... ....+.. ......+++.++++.+++.. +.+ ..+..
T Consensus 25 ~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~-~~~p~gia~~~dG~l~vad~--~~~~~~v~~ 99 (306)
T 2p4o_A 25 ITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV-EGKVSGLAFTSNGDLVATGW--NADSIPVVS 99 (306)
T ss_dssp EEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC-SSEEEEEEECTTSCEEEEEE--CTTSCEEEE
T ss_pred eEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC-CCCceeEEEcCCCcEEEEec--cCCcceEEE
Confidence 3444332 45678999999998888778899999997653 3333322 23467788988887444332 112 24666
Q ss_pred EEccCCceEEEeee-cccCEEEEEecCCCCeEEEecCCCcEEEeeCCCcee-eee----e---e-ec--CceeEEECCCC
Q 021669 83 LSLHDNKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGL----L---R-VQ--GRPAAAYDDQG 150 (309)
Q Consensus 83 ~d~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~-~~~----~---~-~~--~~~~~~~~~~~ 150 (309)
+|..+++....... .......++..+++..+++-..++.|..+|...++. ... + . .. ..+.-. ++++
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-s~dg 178 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-KRFG 178 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-EEET
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-CcCC
Confidence 67777764332221 122345555555555566666688888888765421 100 0 0 00 011222 3344
Q ss_pred cEEEEE--ECCEEEEEECCC-CCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC
Q 021669 151 LVFAVA--FGGYIRMFDARK-YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 151 ~~~~~~--~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
..+..+ ..+.|..|++.. ........+... .....++++++|+++++....+.|.++|.. ++........ ..
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~-~~ 253 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE-QG 253 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG-GT
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc-cc
Confidence 333333 357899999763 111112222211 224568899999998888888999999975 6553321211 12
Q ss_pred CCccceEEEC---CCCCEEEEEcCCC
Q 021669 228 RNSTLEASFS---PEGMFVISGSGDG 250 (309)
Q Consensus 228 ~~~~~~~~~s---p~g~~l~s~s~Dg 250 (309)
.....+++|. ||+++|+.++..+
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cCCceEEEEecccCCCCEEEEECCCC
Confidence 2346789998 8988777765543
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.78 E-value=1.8e-06 Score=70.44 Aligned_cols=189 Identities=13% Similarity=0.013 Sum_probs=122.7
Q ss_pred CEEEEEecCCCCeEEEecCCC--cEEEeeCCCceeeeeeeecCce---eEEECCCCcEEEEE-ECCEEEEEECCCCCcCC
Q 021669 100 RVVSLSLCSSKDCFISGSLDR--TVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVA-FGGYIRMFDARKYEKGP 173 (309)
Q Consensus 100 ~v~~v~~~~~~~~l~s~s~Dg--~v~~Wd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~ 173 (309)
..-.+.|++ +....|.+.+| .|+..|+++++....+.+.... ...... +.++.+. .++.+.+||..+++.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~-- 97 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTP-- 97 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEE--
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcE--
Confidence 466888886 56667777754 9999999999988777655432 223333 3444443 478999999876542
Q ss_pred ceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC--CCCccceEEECCCCCEEEEEcCCCc
Q 021669 174 FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGS 251 (309)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~--~~~~~~~~~~sp~g~~l~s~s~Dg~ 251 (309)
...+...+ . - ..+++|++.|..+..+++|+++|..+.+.+.+...... ....+..+.+. +|+.++....+..
T Consensus 98 ~~ti~~~~--~-G--wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 98 RARFRYPG--E-G--WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEEECSS--C-C--CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred EEEEeCCC--C-c--eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe
Confidence 12223222 1 1 23446777666666689999999999988887765321 11233445554 7777777767889
Q ss_pred EEEEECCCCceEEEeecC------------C-CCCcEEEECCC-eeEEEEccceEEEeeec
Q 021669 252 VYAWSVRSGKEVASWMSF------------D-TEPPVIKWTPG-SLMFVTGSSELSFWIPD 298 (309)
Q Consensus 252 i~vwd~~~~~~~~~~~~~------------~-~~v~~l~~~p~-~~~l~s~~~d~~~~~~~ 298 (309)
|.+.|.++++.+..+..- . ...+.|||+|+ .++|++|-.=-+++...
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 999999999987775411 1 23477999996 56777776534444443
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.77 E-value=2.9e-05 Score=64.48 Aligned_cols=220 Identities=7% Similarity=0.012 Sum_probs=130.2
Q ss_pred cceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce
Q 021669 12 GRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 90 (309)
Q Consensus 12 ~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~ 90 (309)
..+..++|++++. ++++-...+.|..+|.+++.....+.........+++.+++..++++.. ..+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS--QLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC--CCCEEEEEEcCCCCE
Confidence 3456899998654 5556666789999998765433333222235678889888777777653 257899999865432
Q ss_pred EEEeeecccCEEEEEecCCCCeE-EEecC--CCcEEEeeCCCceeeeeee--ecCceeEEECCCC-cEEEEE-ECCEEEE
Q 021669 91 LRYFKGHHDRVVSLSLCSSKDCF-ISGSL--DRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVA-FGGYIRM 163 (309)
Q Consensus 91 ~~~~~~h~~~v~~v~~~~~~~~l-~s~s~--Dg~v~~Wd~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~-~~~~i~~ 163 (309)
.............+++.|++..| ++... .+.|..+++.......... ...-...++++++ .++.+. ..+.|..
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 22222223567899999965544 44433 3678887765432211111 1112234566544 343333 3578999
Q ss_pred EECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCC
Q 021669 164 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 241 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~ 241 (309)
+|+..... ..... + ......++.. ++.++++...++.|.++|..+++.+.++... .......+++.|++.
T Consensus 194 ~~~~g~~~--~~~~~--~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g--~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 194 LNPAQPGR--RKVLE--G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPH--KQTRLYGITIALSQC 263 (267)
T ss_dssp EETTEEEE--EEEEE--C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCS--SCCCCCCEEEECSCC
T ss_pred EecCCCce--EEEec--C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccc--cccccceeeecCccC
Confidence 98753211 11111 1 1223456654 4566666667899999999999888776532 112356688888764
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=2.8e-06 Score=80.37 Aligned_cols=191 Identities=17% Similarity=0.142 Sum_probs=111.2
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeeccccc----------e-eEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKKYG----------V-DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
+..+..++.++.|.-+|..+|+.+..+...... + ..+++ .+..+++++. |+.+..+|.++|+.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~---dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTL---DGRLIALDAKTGKAI 140 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECT---TSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcC---CCEEEEEECCCCCEe
Confidence 456677778999999999999998776533210 0 11122 2445666543 789999999999998
Q ss_pred EEeeecc----cCEEEEEecCCCCeEEEecC------CCcEEEeeCCCceeeeeeeec-Cc-------------------
Q 021669 92 RYFKGHH----DRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQ-GR------------------- 141 (309)
Q Consensus 92 ~~~~~h~----~~v~~v~~~~~~~~l~s~s~------Dg~v~~Wd~~~~~~~~~~~~~-~~------------------- 141 (309)
..+.... ..+.+--...++ .++.+.. ++.|..+|.++++........ ..
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 8876521 111110001134 4444432 689999999999877655321 00
Q ss_pred -------------eeEEECCCCcEEEEE-ECC-------------------EEEEEECCCCCcCCceEEEeCCCC-----
Q 021669 142 -------------PAAAYDDQGLVFAVA-FGG-------------------YIRMFDARKYEKGPFDIFSVGGDI----- 183 (309)
Q Consensus 142 -------------~~~~~~~~~~~~~~~-~~~-------------------~i~~~d~~~~~~~~~~~~~~~~~~----- 183 (309)
....+++...++..+ .++ .|..+|.++.+.. . .+....+.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~-W-~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLA-W-HYQVTPGDSWDFT 297 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE-E-EEESSTTCCSCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCcee-e-EeecCCCcccccc
Confidence 013455443333333 333 3788887654321 0 11111111
Q ss_pred --CCCeEEEEccCCC---EEEEEeCCCcEEEEECCCCeEeEEe
Q 021669 184 --SDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGTLLSTY 221 (309)
Q Consensus 184 --~~~~~v~~s~dg~---~l~~~~~dg~v~i~d~~~~~~~~~~ 221 (309)
.+.....+..+|+ .++.++.+|.++++|..+|+++...
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 1222233344775 6888899999999999999988543
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.71 E-value=2.6e-05 Score=72.37 Aligned_cols=193 Identities=11% Similarity=0.088 Sum_probs=108.4
Q ss_pred CCEEEEeeC-CCcEEEEEc-CCCceeeeeecccc-ce----------eEEEEecCCCEEEEEcCCCCCceeEEEEccCCc
Q 021669 23 SSYLVTASD-DESIRLYDV-TAATCLKTINSKKY-GV----------DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 89 (309)
Q Consensus 23 ~~~l~t~s~-D~~v~iWd~-~~~~~~~~~~~~~~-~v----------~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~ 89 (309)
+..+..++. ++.|.-.|. .+|+.+..+..... .+ ...+. .+..++.++. |+.+..+|.++|+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~---dg~l~alD~~tG~ 136 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQA---NGHLLALDAKTGK 136 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECT---TSEEEEEETTTCC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeC---CCEEEEEECCCCC
Confidence 345555666 899999999 89998866543221 00 11122 2445666543 7889999999999
Q ss_pred eEEEeeecc--c--CEEEEEecCCCCeEEEecC------CCcEEEeeCCCceeeeeeeecCc------------------
Q 021669 90 YLRYFKGHH--D--RVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGR------------------ 141 (309)
Q Consensus 90 ~~~~~~~h~--~--~v~~v~~~~~~~~l~s~s~------Dg~v~~Wd~~~~~~~~~~~~~~~------------------ 141 (309)
.+..+.... . .+.+--...++ .++.++. |+.|..+|.++++..........
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEEecCCCCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 887765321 1 12110001144 4444443 89999999999887655432210
Q ss_pred ----------------------eeEEECCC-CcEEEEEEC----------------CEEEEEECCCCCcCCceEEEeCCC
Q 021669 142 ----------------------PAAAYDDQ-GLVFAVAFG----------------GYIRMFDARKYEKGPFDIFSVGGD 182 (309)
Q Consensus 142 ----------------------~~~~~~~~-~~~~~~~~~----------------~~i~~~d~~~~~~~~~~~~~~~~~ 182 (309)
....+++. +.++....+ +.|..+|.++.+.. - .+....+
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~-W-~~~~~~~ 293 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAK-W-GYQKTPH 293 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEE-E-EEESSTT
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEE-E-EecCCCC
Confidence 01233332 333332211 25778887654320 0 1111111
Q ss_pred -------CCCCeEEEEccCCC---EEEEEeCCCcEEEEECCCCeEeEEeee
Q 021669 183 -------ISDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGTLLSTYNV 223 (309)
Q Consensus 183 -------~~~~~~v~~s~dg~---~l~~~~~dg~v~i~d~~~~~~~~~~~~ 223 (309)
......+...++|+ .++.++.+|.++++|..+|+++-....
T Consensus 294 d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 294 DEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred cccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 11122233345784 577788899999999999998876543
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.69 E-value=8.6e-06 Score=75.60 Aligned_cols=259 Identities=12% Similarity=0.060 Sum_probs=149.8
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeecccc----ceeE-EEEecCCCEEEEEcCC---CCCceeEEEEccCCceEEEe
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKKY----GVDL-VCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 94 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~~~~~s~~---g~d~~i~~~d~~~~~~~~~~ 94 (309)
+..+..++.|+.|..+|..+|+.+........ .+.. -.. .+..+++++.. +.++.+..+|.++|+.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 45777788899999999999998866543221 1111 011 13455555432 12679999999999988876
Q ss_pred eecccC-------------------------------------E-EEEEecCCCCeEEEecC------------C----C
Q 021669 95 KGHHDR-------------------------------------V-VSLSLCSSKDCFISGSL------------D----R 120 (309)
Q Consensus 95 ~~h~~~-------------------------------------v-~~v~~~~~~~~l~s~s~------------D----g 120 (309)
...... + ..+++.++...+..+.. | +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 532110 0 12344455455544432 2 3
Q ss_pred cEEEeeCCCceeeeeeeecC----------ceeEEE-CCCC---cEE-EEEECCEEEEEECCCCCcCCceEEEeCC----
Q 021669 121 TVLLWDQRAEKCQGLLRVQG----------RPAAAY-DDQG---LVF-AVAFGGYIRMFDARKYEKGPFDIFSVGG---- 181 (309)
Q Consensus 121 ~v~~Wd~~~~~~~~~~~~~~----------~~~~~~-~~~~---~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~---- 181 (309)
.|..+|.++++.....+... .+...- ..++ .++ ....+|.+.++|..+.+.- -...+..
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~--w~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI--VAEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEE--EEEESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEE--eeecccCCccc
Confidence 68999999988776654321 111111 1133 233 3344678888887654310 0001100
Q ss_pred ------CC---------------------------CCCeEEEEccCCCEEEEEe--------------------------
Q 021669 182 ------DI---------------------------SDANVVKFSNDGRLMLLTT-------------------------- 202 (309)
Q Consensus 182 ------~~---------------------------~~~~~v~~s~dg~~l~~~~-------------------------- 202 (309)
.. ..-..++++|+..++....
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 00 0012457888766665543
Q ss_pred -----------CCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCC
Q 021669 203 -----------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT 271 (309)
Q Consensus 203 -----------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~ 271 (309)
.+|.++.||+.+++.+-++.... .+....+...+..++.++.|+.+++||.++++.+.++.....
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~----~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF----AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCCC----CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 35789999999998876654321 112222333567788899999999999999999888754332
Q ss_pred C-CcEEEECCCeeEEEEcc
Q 021669 272 E-PPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 272 ~-v~~l~~~p~~~~l~s~~ 289 (309)
. -.-+.|.+++++++...
T Consensus 507 ~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 507 GIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp CCSCCEEEEETTEEEEEEE
T ss_pred cEeeeEEEEECCEEEEEEE
Confidence 1 22345667777665433
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.65 E-value=6.5e-05 Score=69.95 Aligned_cols=194 Identities=14% Similarity=0.095 Sum_probs=110.1
Q ss_pred CCEEEEeeC-CCcEEEEEc-CCCceeeeeeccccc-----------eeEEEEecCCCE----EEEEcCCCCCceeEEEEc
Q 021669 23 SSYLVTASD-DESIRLYDV-TAATCLKTINSKKYG-----------VDLVCFTSHPTT----VIYSSKNGWDESLRLLSL 85 (309)
Q Consensus 23 ~~~l~t~s~-D~~v~iWd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----~~~~s~~g~d~~i~~~d~ 85 (309)
+..+..++. ++.|.-+|. .+|+.+..+...... ...+++.|.+.. ++.++. |+.+..+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---dg~l~AlDa 138 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---DGNVAALNA 138 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---TSEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---CCEEEEEEC
Confidence 345556666 899999999 899988766533210 112344333333 666543 789999999
Q ss_pred cCCceEEEeeeccc----CEEEEEecCCCCeEEEec------CCCcEEEeeCCCceeeeeeeecCce-------------
Q 021669 86 HDNKYLRYFKGHHD----RVVSLSLCSSKDCFISGS------LDRTVLLWDQRAEKCQGLLRVQGRP------------- 142 (309)
Q Consensus 86 ~~~~~~~~~~~h~~----~v~~v~~~~~~~~l~s~s------~Dg~v~~Wd~~~~~~~~~~~~~~~~------------- 142 (309)
++|+.+........ .+.+--...++ .++.++ .++.|+.+|.++++...........
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 139 ETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 99998877653220 12111011144 444444 4899999999998876544322100
Q ss_pred ---------------------------eEEECCC-CcEEEEEEC----------------CEEEEEECCCCCcCCceEEE
Q 021669 143 ---------------------------AAAYDDQ-GLVFAVAFG----------------GYIRMFDARKYEKGPFDIFS 178 (309)
Q Consensus 143 ---------------------------~~~~~~~-~~~~~~~~~----------------~~i~~~d~~~~~~~~~~~~~ 178 (309)
...+++. +.++....+ +.|..+|.++.+.. - .+.
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~-W-~~q 295 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK-F-GYQ 295 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE-E-EEE
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee-e-Eee
Confidence 1233333 333333322 36777777654321 0 111
Q ss_pred eCCCC-------CCCeEEEEc-cCC---CEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 179 VGGDI-------SDANVVKFS-NDG---RLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 179 ~~~~~-------~~~~~v~~s-~dg---~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
...+. .....+... .+| +.++.++.+|.++++|..+|+++-...
T Consensus 296 ~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 296 KTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 11110 111222232 578 567778899999999999999887654
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.63 E-value=6.4e-05 Score=70.00 Aligned_cols=252 Identities=10% Similarity=0.075 Sum_probs=144.7
Q ss_pred EEEeeCCCcEEEEEcCCCceeeeeeccc----cceeE-EEEecCCCEEEEEcCC---CCCceeEEEEccCCceEEEeeec
Q 021669 26 LVTASDDESIRLYDVTAATCLKTINSKK----YGVDL-VCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYFKGH 97 (309)
Q Consensus 26 l~t~s~D~~v~iWd~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~~~~~s~~---g~d~~i~~~d~~~~~~~~~~~~h 97 (309)
+..++.|+.|.-+|..+|+.+....... ..+.. -.+ .+..+++++.. +.++.|+.+|.++|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7788899999999999999876654322 11111 011 12345554321 13689999999999988877532
Q ss_pred ccC-------------------------------------EE-EEEecCCCCeEEEecCC----------------CcEE
Q 021669 98 HDR-------------------------------------VV-SLSLCSSKDCFISGSLD----------------RTVL 123 (309)
Q Consensus 98 ~~~-------------------------------------v~-~v~~~~~~~~l~s~s~D----------------g~v~ 123 (309)
... ++ ...+.++...+..+..+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 211 11 22344555566555444 4899
Q ss_pred EeeCCCceeeeeeeecCc----------eeEEE-C-CCC---cEEE-EEECCEEEEEECCCCCcCCceEEEeCC------
Q 021669 124 LWDQRAEKCQGLLRVQGR----------PAAAY-D-DQG---LVFA-VAFGGYIRMFDARKYEKGPFDIFSVGG------ 181 (309)
Q Consensus 124 ~Wd~~~~~~~~~~~~~~~----------~~~~~-~-~~~---~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~------ 181 (309)
.+|.++++.....+.... +...- . .++ .++. ...+|.+.++|.++.+.- -......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l--w~~~~~~~~~~~~ 359 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV--SANKLDDTVNVFK 359 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE--EEEESSTTCCSEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe--ecccccCCccccc
Confidence 999999987766544321 11211 1 234 2333 445788988887654310 0000000
Q ss_pred ----CC---------------------------CCCeEEEEccCCCEEEEEe----------------------------
Q 021669 182 ----DI---------------------------SDANVVKFSNDGRLMLLTT---------------------------- 202 (309)
Q Consensus 182 ----~~---------------------------~~~~~v~~s~dg~~l~~~~---------------------------- 202 (309)
.. ..-..++++|+..++....
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 00 0112346676655543321
Q ss_pred -----------CCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCC
Q 021669 203 -----------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT 271 (309)
Q Consensus 203 -----------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~ 271 (309)
..|.+.-||+.+++.+=+..... +...-.....+..++.++.|+.++.||.++++.+-++....+
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF----AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC----CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 34788899999988765443211 111111223667788899999999999999999887754332
Q ss_pred CC-cEEEECCCeeEE
Q 021669 272 EP-PVIKWTPGSLMF 285 (309)
Q Consensus 272 ~v-~~l~~~p~~~~l 285 (309)
.. .-+.|..+|++.
T Consensus 516 ~~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 516 AIGYPMTYTHKGTQY 530 (599)
T ss_dssp CCSCCEEEEETTEEE
T ss_pred cEeccEEEEeCCEEE
Confidence 22 235666777654
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=0.00012 Score=70.53 Aligned_cols=275 Identities=11% Similarity=0.050 Sum_probs=155.8
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec-------cccceeEEEEecCCCEEEEEcCCCCCceeEEEE
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS-------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 84 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d 84 (309)
..|.++..+++|.+.+.. .+ -+.+||..+++....... ....|..+....++. +..+.. .+-+.++|
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~---~~Gl~~~~ 284 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATE---LNGIMILD 284 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEES---SSCEEEEE
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeC---CCCeEEEC
Confidence 468899999988776544 34 688999876654322111 123466666555554 333332 23478888
Q ss_pred ccCCceEEEee--------------ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeee-----------ec
Q 021669 85 LHDNKYLRYFK--------------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-----------VQ 139 (309)
Q Consensus 85 ~~~~~~~~~~~--------------~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~-----------~~ 139 (309)
..+++...... -....|.++...++++ |..|+.++-|..++........... ..
T Consensus 285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 363 (781)
T 3v9f_A 285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNK 363 (781)
T ss_dssp TTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSS
T ss_pred CCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCc
Confidence 87665322111 1345788888877775 6667777788888876544322110 01
Q ss_pred CceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeE
Q 021669 140 GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 219 (309)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~ 219 (309)
.......+.++.+..+..++.+..||........+. .........+.++...++|.+.+ |+.++-+..+|..++....
T Consensus 364 ~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 364 VVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK-ENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI 441 (781)
T ss_dssp CEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc-CCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE
Confidence 122334455677777776777888886532111110 00011224577788888887655 5666678889987765432
Q ss_pred EeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeecC-----CCCCcEEEECCCeeEEEEcc-ceEE
Q 021669 220 TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF-----DTEPPVIKWTPGSLMFVTGS-SELS 293 (309)
Q Consensus 220 ~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~-----~~~v~~l~~~p~~~~l~s~~-~d~~ 293 (309)
+.........+.++...++|+..+.. . +.+..+|..+++........ ...|.++...+++++.+... ..+.
T Consensus 442 -~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~ 518 (781)
T 3v9f_A 442 -IELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVG 518 (781)
T ss_dssp -CCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEE
T ss_pred -eccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEE
Confidence 22111233567777788888765544 4 55999998876543221111 34577888888887655443 4455
Q ss_pred Eeeec
Q 021669 294 FWIPD 298 (309)
Q Consensus 294 ~~~~~ 298 (309)
.+.++
T Consensus 519 ~~~~~ 523 (781)
T 3v9f_A 519 IYTPD 523 (781)
T ss_dssp EECTT
T ss_pred EEeCC
Confidence 55544
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.62 E-value=0.00015 Score=67.34 Aligned_cols=259 Identities=14% Similarity=0.154 Sum_probs=146.6
Q ss_pred CCEEEEeeCCCcEEEEEcCCCceeeeeecccc----cee-EEEEecC---CC-EEEEEcCC---CCCceeEEEEccCCce
Q 021669 23 SSYLVTASDDESIRLYDVTAATCLKTINSKKY----GVD-LVCFTSH---PT-TVIYSSKN---GWDESLRLLSLHDNKY 90 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~----~v~-~~~~~~~---~~-~~~~~s~~---g~d~~i~~~d~~~~~~ 90 (309)
+..+..++.|+.|.-.|..+|+.+........ .+. .-.+..+ ++ .+++++.. +.++.+..+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677788999999999999998866543221 111 1111111 22 44444321 2367899999999998
Q ss_pred EEEeeecccCE-----------------------------------------EEEEecCCCCeEEEecC-----------
Q 021669 91 LRYFKGHHDRV-----------------------------------------VSLSLCSSKDCFISGSL----------- 118 (309)
Q Consensus 91 ~~~~~~h~~~v-----------------------------------------~~v~~~~~~~~l~s~s~----------- 118 (309)
+.........+ ...++.|+...+..+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 87654211000 01234455555544331
Q ss_pred ---------C----CcEEEeeCCCceeeeeeeecC----------ceeEEEC--CCC----cEEEEEECCEEEEEECCCC
Q 021669 119 ---------D----RTVLLWDQRAEKCQGLLRVQG----------RPAAAYD--DQG----LVFAVAFGGYIRMFDARKY 169 (309)
Q Consensus 119 ---------D----g~v~~Wd~~~~~~~~~~~~~~----------~~~~~~~--~~~----~~~~~~~~~~i~~~d~~~~ 169 (309)
| +.|..+|.++++.....+... .+..... .++ .++....+|.++++|.++.
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 3 689999999998876654321 1122211 233 2344446789999987653
Q ss_pred CcCCceEEEeCC---------------------CC----------------------CCCeEEEEccCCCEEEEEe----
Q 021669 170 EKGPFDIFSVGG---------------------DI----------------------SDANVVKFSNDGRLMLLTT---- 202 (309)
Q Consensus 170 ~~~~~~~~~~~~---------------------~~----------------------~~~~~v~~s~dg~~l~~~~---- 202 (309)
+.- -.+.... .. ..-..++++|+...+....
T Consensus 357 ~~l--w~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 357 KLQ--NAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp CEE--EEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CEe--cccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 310 0000000 00 0011345666544433322
Q ss_pred -----------------------------CCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEE
Q 021669 203 -----------------------------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVY 253 (309)
Q Consensus 203 -----------------------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~ 253 (309)
.+|.++-||+.+++.+=+..... ....-.....+..++.|+.|+.++
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL----PLWAGVLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS----CCCSCCEEETTTEEEEECTTSEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC----CCcccceEeCCCEEEEECCCCcEE
Confidence 25789999999998775444321 111111222567788899999999
Q ss_pred EEECCCCceEEEeecCCCCC-cEEEECCCeeEEEE
Q 021669 254 AWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 287 (309)
Q Consensus 254 vwd~~~~~~~~~~~~~~~~v-~~l~~~p~~~~l~s 287 (309)
.||.++++.+-.+..-.+.. .-+.|..+|++.+.
T Consensus 511 A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence 99999999998876533222 22667778875544
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=0.00016 Score=69.54 Aligned_cols=274 Identities=11% Similarity=0.043 Sum_probs=162.1
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec----------cccceeEEEEecCCCEEEEEcCCCCCcee
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS----------KKYGVDLVCFTSHPTTVIYSSKNGWDESL 80 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~s~~g~d~~i 80 (309)
...|.++..+++|.+- .|..++-|..++..++.... +.. ....|..++...++. +..+.. ++-+
T Consensus 312 ~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~---~~Gl 385 (781)
T 3v9f_A 312 NASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTD---GGGI 385 (781)
T ss_dssp SSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSC-EEEEEB---SSCE
T ss_pred CCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCC-EEEEeC---CCcE
Confidence 4579999999988654 45667888889876543222 211 123466666655554 333332 2347
Q ss_pred EEEEccCCceEEEe---eecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeee--ec--CceeEEECCCCcEE
Q 021669 81 RLLSLHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQ--GRPAAAYDDQGLVF 153 (309)
Q Consensus 81 ~~~d~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~--~~--~~~~~~~~~~~~~~ 153 (309)
..+|..+++..... ......|.++...++++ |..|+.++-+..+|.++++...... .. .......+.++.+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw 464 (781)
T 3v9f_A 386 NVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW 464 (781)
T ss_dssp EEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE
T ss_pred EEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE
Confidence 88887654332211 12346788888777775 4446666778888887665433211 11 11223445566666
Q ss_pred EEEECCEEEEEECCCCCcCCceEEEeCC----CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeee-cCCCC
Q 021669 154 AVAFGGYIRMFDARKYEKGPFDIFSVGG----DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV-KPVSR 228 (309)
Q Consensus 154 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~-~~~~~ 228 (309)
.+.. +.+..+|....+ +..+.... ....+.++...++|++.+....+| +..+|..++.... +.. .....
T Consensus 465 igt~-~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~-~~~~~~l~~ 538 (781)
T 3v9f_A 465 IGTH-AGVFVIDLASKK---VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRK-FNQYEGFCS 538 (781)
T ss_dssp EEET-TEEEEEESSSSS---CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEE-ECTTTTCSC
T ss_pred EEEC-CceEEEeCCCCe---EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEE-ccCCCCCCC
Confidence 6555 678889876432 22221111 124578888899998765543344 7778887665433 321 12234
Q ss_pred CccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEeec---C-CCCCcEEEECCCeeEEEEccceEEEeeecC
Q 021669 229 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS---F-DTEPPVIKWTPGSLMFVTGSSELSFWIPDL 299 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~---~-~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~ 299 (309)
..+.++...++|+..++.. +|-+..||..+++. ..+.. . ...+.++...++|++.+++...+..+.|+.
T Consensus 539 ~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~ 611 (781)
T 3v9f_A 539 NTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSK 611 (781)
T ss_dssp SCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTT
T ss_pred CeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCC
Confidence 5677788888988766655 66549999877653 33321 1 235778888888888777766666666653
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.57 E-value=0.00014 Score=61.70 Aligned_cols=219 Identities=12% Similarity=0.040 Sum_probs=125.4
Q ss_pred ceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecC-CC-cEEEeeCCCcee
Q 021669 55 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL-DR-TVLLWDQRAEKC 132 (309)
Q Consensus 55 ~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-Dg-~v~~Wd~~~~~~ 132 (309)
....+++.++++ ++++.. .++.|..+|...+ ....+ .-...+.++++.++++.+++... ++ .|..+|..+++.
T Consensus 33 ~pegia~~~~g~-lyv~d~--~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAPDGT-IFVTNH--EVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECTTSC-EEEEET--TTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECCCCC-EEEEeC--CCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 356778888876 444332 2568888887653 33222 23356889999999986665543 23 466667666654
Q ss_pred eeeeeecC---ceeEEECCCCcEEEEE-ECCEEEEEECCCCCcCCceEEE---------eCCCCCCCeEEEEccCCC-EE
Q 021669 133 QGLLRVQG---RPAAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFS---------VGGDISDANVVKFSNDGR-LM 198 (309)
Q Consensus 133 ~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~v~~s~dg~-~l 198 (309)
........ .......+.+.++... ..+.|..+|..... ..+.. ........+.+ +||++ ++
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~---~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS---GSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE---EEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCc---EeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 33222211 1122333444444443 36788888864311 01110 00111223444 88886 45
Q ss_pred EEEeCCCcEEEEECCC-CeE--eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEE--EeecCCCCC
Q 021669 199 LLTTMEGHIHVLDSFR-GTL--LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA--SWMSFDTEP 273 (309)
Q Consensus 199 ~~~~~dg~v~i~d~~~-~~~--~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~--~~~~~~~~v 273 (309)
++-...+.|+.||... +.. ...+.. ......+++.++|+.+++-...+.|.++|.. ++... .+...-..+
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p 257 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE----QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGS 257 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE----SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec----cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCc
Confidence 6666788999999864 322 111111 0223468999999988888888899999975 55422 232222467
Q ss_pred cEEEEC---CCe-eEEEEc
Q 021669 274 PVIKWT---PGS-LMFVTG 288 (309)
Q Consensus 274 ~~l~~~---p~~-~~l~s~ 288 (309)
++++|. |++ .++++.
T Consensus 258 ~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 258 TAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEEEECCSTTTTTEEEEEE
T ss_pred eEEEEecccCCCCEEEEEC
Confidence 899998 885 455554
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.56 E-value=6.1e-05 Score=64.36 Aligned_cols=227 Identities=14% Similarity=0.071 Sum_probs=129.8
Q ss_pred eeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeee--------------------cccCEEEEEecC-CCCeEE
Q 021669 56 VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG--------------------HHDRVVSLSLCS-SKDCFI 114 (309)
Q Consensus 56 v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~--------------------h~~~v~~v~~~~-~~~~l~ 114 (309)
...+++.++++.+++... ++.|..||..+++.. .+.. ....+.++++.+ +++.++
T Consensus 21 p~~i~~d~~g~~l~v~~~---~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQ---DGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCCEECCTTCSSEEEECT---TSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred ceEEEEcCCCCEEEEEcC---CCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 456777777764555432 567888888765432 2221 123578899997 665444
Q ss_pred EecCCCcEEEeeCCCceeeeeee-ec-----CceeEEECC-CCcEEEEEEC------------------CEEEEEECCCC
Q 021669 115 SGSLDRTVLLWDQRAEKCQGLLR-VQ-----GRPAAAYDD-QGLVFAVAFG------------------GYIRMFDARKY 169 (309)
Q Consensus 115 s~s~Dg~v~~Wd~~~~~~~~~~~-~~-----~~~~~~~~~-~~~~~~~~~~------------------~~i~~~d~~~~ 169 (309)
+ ...+.+..+|..++....... .. .-......+ ++.++.+... +.|..+|....
T Consensus 97 ~-d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 V-DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp E-ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred E-ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 4 334558888876553221111 11 112345566 6665554422 56777776432
Q ss_pred CcCCceEEEeCCCCCCCeEEEEccCCCE-EEEEeCCCcEEEEECCCCe--EeEEeeecCCCCCccceEEECCCCCEEEEE
Q 021669 170 EKGPFDIFSVGGDISDANVVKFSNDGRL-MLLTTMEGHIHVLDSFRGT--LLSTYNVKPVSRNSTLEASFSPEGMFVISG 246 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~s~dg~~-l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~ 246 (309)
+ ...... .....+.++++|+|+. +++-..++.|.+||..... ....+... .. ...+++.++|+.+++.
T Consensus 176 ~---~~~~~~--~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 176 E---TTLLLK--ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp E---EEEEEE--EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEEEEECTTSCEEEEE
T ss_pred E---EEEecc--CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCCeEECCCCCEEEEe
Confidence 1 111111 1123467899999985 4555677899999986421 11122111 12 4568999999877776
Q ss_pred cC----------CCcEEEEECCCCceEEEeecCC----CCCcEEEECCCeeEEEEccceEEEeeec
Q 021669 247 SG----------DGSVYAWSVRSGKEVASWMSFD----TEPPVIKWTPGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 247 s~----------Dg~i~vwd~~~~~~~~~~~~~~----~~v~~l~~~p~~~~l~s~~~d~~~~~~~ 298 (309)
.. .+.|..+|. .++.+..+.... ..++.+++ .+++++++.....++...+
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEE
T ss_pred cCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEe
Confidence 54 467888887 467666664332 24666776 4677777755544444333
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=0.00074 Score=60.33 Aligned_cols=240 Identities=10% Similarity=0.048 Sum_probs=135.3
Q ss_pred eEEEEeCCC---CCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCC-Cce-eEEEEccCC
Q 021669 14 ISSMDFHKS---SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW-DES-LRLLSLHDN 88 (309)
Q Consensus 14 V~~i~~s~~---~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~-d~~-i~~~d~~~~ 88 (309)
...|+|+|+ +++.++- ..+.|+.+|..+++....+. .......+++.++++ ++++...+. +.. +...+...+
T Consensus 141 P~gvavd~~s~~g~Lyv~D-~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVG-QRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEEC-BTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CceEEEccccCCCEEEEEe-CCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 458999985 5554443 33899999998776554433 333467889999998 555432211 112 223333222
Q ss_pred ce-EEEeeecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCCceeeeee-eec---CceeEEECCCCcEEEEE--ECCE
Q 021669 89 KY-LRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLL-RVQ---GRPAAAYDDQGLVFAVA--FGGY 160 (309)
Q Consensus 89 ~~-~~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~--~~~~ 160 (309)
.. ...+. .......+++.| +++..++-..++.|+.+|..++.....+ ... ....+++++++..+..+ ..+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 11222 234456788888 6776767777889999998766542222 111 11236777777633333 3578
Q ss_pred EEEEECCCCCc--C-CceEEEeCC------------CCCCCeEEEE---------ccCCCEEEEEeCCCcEEEEECCCCe
Q 021669 161 IRMFDARKYEK--G-PFDIFSVGG------------DISDANVVKF---------SNDGRLMLLTTMEGHIHVLDSFRGT 216 (309)
Q Consensus 161 i~~~d~~~~~~--~-~~~~~~~~~------------~~~~~~~v~~---------s~dg~~l~~~~~dg~v~i~d~~~~~ 216 (309)
|+.++...... . +..+....+ .......+++ .++|.++++-..++.|+.++. .|.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 88887542110 0 001111000 1223456888 888999998888999999985 565
Q ss_pred EeEEeeecC--------------CCCCccceEEEC-CCCCEEEEEcCCCcEEEEECC
Q 021669 217 LLSTYNVKP--------------VSRNSTLEASFS-PEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 217 ~~~~~~~~~--------------~~~~~~~~~~~s-p~g~~l~s~s~Dg~i~vwd~~ 258 (309)
......... ..-.....++++ ++|..+++=.....|+.++++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 443221100 001234568888 566666655666677777653
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.37 E-value=0.001 Score=61.74 Aligned_cols=108 Identities=13% Similarity=0.095 Sum_probs=63.9
Q ss_pred CEEEEeeCCCcEEEEEcCCCceeeeeeccccc-e--------eEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEe
Q 021669 24 SYLVTASDDESIRLYDVTAATCLKTINSKKYG-V--------DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 94 (309)
Q Consensus 24 ~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~-v--------~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~ 94 (309)
..+..++.++.|.-+|..+|+.+..+...... . ...++ .+..+++++. |+.+..+|.++|+.+..+
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~---dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTL---DASVVALNKNTGKVVWKK 143 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEET---TTEEEEEESSSCCEEEEE
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeC---CCEEEEEECCCCCEEeee
Confidence 34444445334888999999998766543211 0 11122 2445665543 778999999999988876
Q ss_pred eeccc----CEEE-EEecC---CCC-eEEEec------CCCcEEEeeCCCceeeeee
Q 021669 95 KGHHD----RVVS-LSLCS---SKD-CFISGS------LDRTVLLWDQRAEKCQGLL 136 (309)
Q Consensus 95 ~~h~~----~v~~-v~~~~---~~~-~l~s~s------~Dg~v~~Wd~~~~~~~~~~ 136 (309)
+.... .+.+ -.+.. +++ .++.++ .++.|..+|.++++.....
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 54321 1111 01111 223 555554 3889999999988876543
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.35 E-value=0.00011 Score=70.52 Aligned_cols=115 Identities=10% Similarity=0.137 Sum_probs=76.0
Q ss_pred ceEEEEeC-CCCCEEEEeeC-C----CcEEEEEcCCC-ceee-eeeccccceeEEEEecCCCEEEEEcCCC--CCceeEE
Q 021669 13 RISSMDFH-KSSSYLVTASD-D----ESIRLYDVTAA-TCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRL 82 (309)
Q Consensus 13 ~V~~i~~s-~~~~~l~t~s~-D----~~v~iWd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g--~d~~i~~ 82 (309)
.+...+|| |||++||=+.. + .+|+++|+.++ +.+. .+.. ....++|+|+++.+++.+... ....|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67789999 99998874332 2 35999999998 6332 1211 234678999999888876421 1146888
Q ss_pred EEccCCce--EEEeee-cccCEEEEEecCCCCeEEEecC---CCcEEEeeCCCc
Q 021669 83 LSLHDNKY--LRYFKG-HHDRVVSLSLCSSKDCFISGSL---DRTVLLWDQRAE 130 (309)
Q Consensus 83 ~d~~~~~~--~~~~~~-h~~~v~~v~~~~~~~~l~s~s~---Dg~v~~Wd~~~~ 130 (309)
+++.+++. +..+.. .......+.|+||+++|+..+. ...|.++|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 88877642 333332 3345678899999998765542 346777888764
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.32 E-value=0.0014 Score=57.58 Aligned_cols=255 Identities=11% Similarity=0.002 Sum_probs=145.5
Q ss_pred EEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEe
Q 021669 15 SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 94 (309)
Q Consensus 15 ~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~ 94 (309)
++.+..+++ +|+-+ ....|+..++........+... .....+++.+....++++.. ..+.|..+++..+.....+
T Consensus 80 ~C~~~~~~~-~l~~~-~~~~I~~i~~~~~~~~~~~~~~-~~~~gl~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 80 SCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDV--TLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CEEECSSCC-EEEEE-CBSCEEEECTTSCCCEEEECSC-SCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCEEEEE
T ss_pred eECCccccc-eeEee-cCccceeeccCCCcEEEEecCC-CccEEEEEecCCCeEEEEeC--CCCcEEEEecCCCCcEEEE
Confidence 344555533 33333 4467888888765444333332 24667888887778887753 2578999998876544444
Q ss_pred eecccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCceeeeeeeec-Cc-eeEEECCCC-cEEEEEE-C-CEEEEEECCC
Q 021669 95 KGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-GR-PAAAYDDQG-LVFAVAF-G-GYIRMFDARK 168 (309)
Q Consensus 95 ~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~-~-~~i~~~d~~~ 168 (309)
.........+++.+. ++..++-...+.|.+.++........+... .. ...+.++.+ .++.+.. . +.|..+++..
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 333345567888864 455566667788888887644322222111 11 234555443 3433332 3 5777777643
Q ss_pred CCcCCceEEEeCCCCCCCeEEEEccCC-CEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEc
Q 021669 169 YEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 247 (309)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s 247 (309)
.. ............+.++++|++ +++++-...+.|..+|...... ..+... .......+++ ..+..+.+-.
T Consensus 235 ~~----~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~--~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 235 SG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQ--GLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp CS----CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECS--SCSSEEEEEE-ETTEEEEEET
T ss_pred CC----cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEEC--CCCCceEEEE-ECCEEEEeeC
Confidence 21 111112223346789999755 5556666778899999754332 222111 1223456677 4556667777
Q ss_pred CCCcEEEEECCCCceEEEeecCCCCCcEEE-ECCCe
Q 021669 248 GDGSVYAWSVRSGKEVASWMSFDTEPPVIK-WTPGS 282 (309)
Q Consensus 248 ~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~-~~p~~ 282 (309)
..+.|..++..+++.+..+...-..+..|+ ++|..
T Consensus 307 ~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~ 342 (386)
T 3v65_B 307 HTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQR 342 (386)
T ss_dssp TTTEEEEEETTTCCSCEEEECSCSCCCCEEEESGGG
T ss_pred CCCeEEEEECCCCcceEEEccCCCCCceEEEEchhc
Confidence 788999999777776666554333444554 34443
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=0.00085 Score=59.88 Aligned_cols=242 Identities=12% Similarity=0.134 Sum_probs=134.8
Q ss_pred ceEEEEeCC-CCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCC--CceeEEEEccCCc
Q 021669 13 RISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW--DESLRLLSLHDNK 89 (309)
Q Consensus 13 ~V~~i~~s~-~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~--d~~i~~~d~~~~~ 89 (309)
....|+++| ++..|..+...+.|+.+|..++....... .......+++.++++.++++...+. ...+.+.+.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 346889998 34445444444889999987665443333 3334677899999986666643211 1123334433 22
Q ss_pred eE--EEeeecccCEEEEEecC-CCCeEEEecCCCcEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEEEE--ECCEE
Q 021669 90 YL--RYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVA--FGGYI 161 (309)
Q Consensus 90 ~~--~~~~~h~~~v~~v~~~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~i 161 (309)
.. ..+.. ......+++.| ++..+++-..++.|..+|+............. -..+++++++..+..+ ..+.|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 21 23322 33457788999 67777777778899999987665422222211 2346778877644333 35788
Q ss_pred EEEECCCCCc--C-CceEEEeCC------------CCCCCe-EEEEc--------cCCCEEEEEeCCCcEEEEECCCCeE
Q 021669 162 RMFDARKYEK--G-PFDIFSVGG------------DISDAN-VVKFS--------NDGRLMLLTTMEGHIHVLDSFRGTL 217 (309)
Q Consensus 162 ~~~d~~~~~~--~-~~~~~~~~~------------~~~~~~-~v~~s--------~dg~~l~~~~~dg~v~i~d~~~~~~ 217 (309)
..++...... . ...+....+ ...... .++.. ++|.++++-..++.|+.++. .|..
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcE
Confidence 8887542100 0 000111000 011122 45553 45788888888889999984 5654
Q ss_pred eEEeeec----CC----------CCCccceEEECCC-CCEEEEEcCCCcEEEEECC
Q 021669 218 LSTYNVK----PV----------SRNSTLEASFSPE-GMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 218 ~~~~~~~----~~----------~~~~~~~~~~sp~-g~~l~s~s~Dg~i~vwd~~ 258 (309)
....... .. .-.....++++|+ |..+++-.....|+.++++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 4332210 00 0123567889985 5555555666778777653
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.26 E-value=0.0018 Score=56.09 Aligned_cols=257 Identities=11% Similarity=0.014 Sum_probs=145.7
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
...+|....+++.++++ ....|+..++........+... .....+++.+....++++.. ..+.|..+++..+...
T Consensus 34 d~~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~~~-~~~~~l~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDV--TLDRILRANLNGSNVE 108 (349)
T ss_dssp TSSCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEEECSC-SCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCE
T ss_pred CCCcccccccCceeEee--cccceEEEeCCCCeeEEeecCC-CceEEEEEeccccEEEEEec--cCCceEEEecCCCCce
Confidence 34456666664434433 3456888887654443333332 23567888887778887753 2578999998876544
Q ss_pred EEeeecccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCceeeeeeee--cCceeEEECCC-CcEEEEEE-C-CEEEEEE
Q 021669 92 RYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRV--QGRPAAAYDDQ-GLVFAVAF-G-GYIRMFD 165 (309)
Q Consensus 92 ~~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~-~-~~i~~~d 165 (309)
..+........++++.+. ++..++-...+.|.+.++........+.. ..-...+.++. +.++-+.. . +.|..++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 433333345577888864 55566767778899998765432222211 11123455553 44443333 3 6788777
Q ss_pred CCCCCcCCceEEEeCCCCCCCeEEEEccCC-CEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEE
Q 021669 166 ARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 244 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~ 244 (309)
+..... ...........+.++++|++ +++++-...+.|..+|...... ..+... .......+++ .++..+.
T Consensus 189 ~dG~~~----~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~--~~~~P~giav-~~~~ly~ 260 (349)
T 3v64_C 189 MDGSGR----RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQ--GLPHPFAITV-FEDSLYW 260 (349)
T ss_dssp TTSCSC----EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS--SCSSEEEEEE-ETTEEEE
T ss_pred CCCCCc----EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeC--CCCCceEEEE-ECCEEEE
Confidence 643211 11111123345789999855 5555666678999999764332 222111 1123345677 3556666
Q ss_pred EEcCCCcEEEEECCCCceEEEeecCCCCCcEEE-ECCC
Q 021669 245 SGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIK-WTPG 281 (309)
Q Consensus 245 s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~-~~p~ 281 (309)
+-...+.|...+..+++.+..+...-..+..|+ ++|.
T Consensus 261 td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~ 298 (349)
T 3v64_C 261 TDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQ 298 (349)
T ss_dssp EETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECGG
T ss_pred ecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEccc
Confidence 667778899999767766555543323344444 3443
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.11 E-value=0.00011 Score=69.25 Aligned_cols=230 Identities=10% Similarity=0.044 Sum_probs=121.1
Q ss_pred EEEEec-CCCEEEEEcCCCC--------CceeEEEEccCCceE--EEee-ecccCEEEEEecCCCCeEEEecC-CCcEEE
Q 021669 58 LVCFTS-HPTTVIYSSKNGW--------DESLRLLSLHDNKYL--RYFK-GHHDRVVSLSLCSSKDCFISGSL-DRTVLL 124 (309)
Q Consensus 58 ~~~~~~-~~~~~~~~s~~g~--------d~~i~~~d~~~~~~~--~~~~-~h~~~v~~v~~~~~~~~l~s~s~-Dg~v~~ 124 (309)
.+++.+ +++.++++..... ...+.+||+.+++-. ..+. .+.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455566 5555555432110 126889999887632 2221 23333445677789999999984 568999
Q ss_pred eeCCCceeeeeeeecC---ceeEEECCCCcEEEEEE--C-----CEEEEEECCCCCcCCceEEEe---CCCCCCCeEEEE
Q 021669 125 WDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAF--G-----GYIRMFDARKYEKGPFDIFSV---GGDISDANVVKF 191 (309)
Q Consensus 125 Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~-----~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~v~~ 191 (309)
||+.+++....-.++. .......+++.++..+. + ..+.+||..+.+ ...... ..-...-....+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~---W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT---WTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE---EEEETTSCSGGGCCCCTTGGG
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc---ceeCCCcccccccccccccee
Confidence 9998876554332221 12334443455554443 2 468889876421 111000 000000000112
Q ss_pred ccCCCEEEEEeCCC---------cEEEEECCCCeEeEEeeecCC------CCCccceEEECC-CCCEEEEEcCCC-----
Q 021669 192 SNDGRLMLLTTMEG---------HIHVLDSFRGTLLSTYNVKPV------SRNSTLEASFSP-EGMFVISGSGDG----- 250 (309)
Q Consensus 192 s~dg~~l~~~~~dg---------~v~i~d~~~~~~~~~~~~~~~------~~~~~~~~~~sp-~g~~l~s~s~Dg----- 250 (309)
..+++.++.++.+| .+..||..+............ ....-..+.|.+ +++.++.||.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 34556556665544 467788776654332221111 011123344543 788888888543
Q ss_pred ------cEEEEECCCCceEEEe--e-cCCCCCcEEEECCCeeEEEEccc
Q 021669 251 ------SVYAWSVRSGKEVASW--M-SFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 251 ------~i~vwd~~~~~~~~~~--~-~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
.+.+||..+.+-.... . .....-.+.+..|++++++.|+.
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~ 475 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQ 475 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCB
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCc
Confidence 6888888775543321 1 12222234566799999999874
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.0054 Score=54.67 Aligned_cols=230 Identities=12% Similarity=0.110 Sum_probs=124.5
Q ss_pred eeEEEEec-CCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecC-CC----cEEEeeCCC
Q 021669 56 VDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL-DR----TVLLWDQRA 129 (309)
Q Consensus 56 v~~~~~~~-~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-Dg----~v~~Wd~~~ 129 (309)
...+++.| +...++++.. + +.|+.+|++.++.. .+.........+++.+++++|..+.. ++ .+...+ ..
T Consensus 139 P~~lavdp~~~g~Lyv~d~-~--~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~ 213 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGE-Q--HPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RE 213 (430)
T ss_dssp CCEEEEETTEEEEEEEEEB-T--EEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GG
T ss_pred CCEEEECCCCCCeEEEEeC-C--CcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CC
Confidence 34677776 3455555542 2 68999998876543 33335567889999999995544433 22 233333 22
Q ss_pred ceee--eeee-ecCceeEEECC-CCcEEEEE-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCC-EEEEEeC
Q 021669 130 EKCQ--GLLR-VQGRPAAAYDD-QGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTM 203 (309)
Q Consensus 130 ~~~~--~~~~-~~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~ 203 (309)
+... ..+. ...-...+.++ .+.++.+. ..+.|..++....... .+..... ....+.++++|+|+ ++++-..
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~~-~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQD-SGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECSS-SSCCEEEEECTTSSEEEEEETT
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcCC-CCcceeEEEcCCCCEEEEEECC
Confidence 3221 1111 11222355666 56665554 3578999987532110 1222221 23457899999999 5666677
Q ss_pred CCcEEEEECCC--CeE--eEEeeecCC------------CCCccc-eEEEC--------CCCCEEEEEcCCCcEEEEECC
Q 021669 204 EGHIHVLDSFR--GTL--LSTYNVKPV------------SRNSTL-EASFS--------PEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 204 dg~v~i~d~~~--~~~--~~~~~~~~~------------~~~~~~-~~~~s--------p~g~~l~s~s~Dg~i~vwd~~ 258 (309)
++.|..++... +.. ...+..... .-.... .++.. ++|..+++=.....|+.++.
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~- 369 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP- 369 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-
Confidence 88999987642 322 111111100 001112 23442 34666666566778888883
Q ss_pred CCceEEEeecC-----C----C---------CCcEEEECC-CeeEEEEccceEEEe
Q 021669 259 SGKEVASWMSF-----D----T---------EPPVIKWTP-GSLMFVTGSSELSFW 295 (309)
Q Consensus 259 ~~~~~~~~~~~-----~----~---------~v~~l~~~p-~~~~l~s~~~d~~~~ 295 (309)
+++ +.++.+. . + .+..|++.| ++.++++-....++.
T Consensus 370 ~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 424 (430)
T 3tc9_A 370 QGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIR 424 (430)
T ss_dssp TSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred CCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 553 3333221 1 1 356799999 577776655444443
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.05 E-value=0.0044 Score=52.73 Aligned_cols=227 Identities=13% Similarity=0.080 Sum_probs=131.3
Q ss_pred CCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC----CceEEEeeecccCEEEEEec
Q 021669 32 DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYLRYFKGHHDRVVSLSLC 107 (309)
Q Consensus 32 D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~----~~~~~~~~~h~~~v~~v~~~ 107 (309)
...|+..|+.+.+....+.... ....+++.+....++++.. .++.|..+++.. ......+........++++.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~-~p~g~~~d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLR-NVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCS-SEEEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred CCeEEEEECCCcceEehhcCCC-ceEEEEEEeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe
Confidence 3578888988766544443322 3567888887778887753 267899999876 22222232233456788887
Q ss_pred CC-CCeEEEecCCCcEEEeeCCCceeeeeeeec-Cc-eeEEECC-CCcEEEEEEC--CEEEEEECCCCCcCCceEEEeCC
Q 021669 108 SS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-GR-PAAAYDD-QGLVFAVAFG--GYIRMFDARKYEKGPFDIFSVGG 181 (309)
Q Consensus 108 ~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~ 181 (309)
+. ++..++-...+.|.+.|+........+... .. ...+.++ .+.++-+..+ +.|..+++.... .......
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~----~~~~~~~ 161 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----IYSLVTE 161 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----EEEEECS
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----eEEEEEC
Confidence 64 455566677889999998654333222211 12 2345555 4444444332 577777764211 1111122
Q ss_pred CCCCCeEEEEccCCC-EEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCC
Q 021669 182 DISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 182 ~~~~~~~v~~s~dg~-~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~ 260 (309)
.....+.++++|++. ++++-...+.|..+|... .....+............+++. .++.+.+-...+.|..++..++
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 234567899998654 555556678999999864 3233332111111233456664 4666677777889999998777
Q ss_pred ceEEEee
Q 021669 261 KEVASWM 267 (309)
Q Consensus 261 ~~~~~~~ 267 (309)
+.+..+.
T Consensus 240 ~~~~~i~ 246 (316)
T 1ijq_A 240 SDVNLLA 246 (316)
T ss_dssp CCCEEEE
T ss_pred cceEEEe
Confidence 7665554
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.04 E-value=0.0036 Score=51.52 Aligned_cols=215 Identities=13% Similarity=0.182 Sum_probs=123.0
Q ss_pred eEecCCCcceEEEEeCCCCCEEE-EeeCCCcEEEEEcCCCceeeeeecc-ccceeEEEEecCCCEEEEEcCCCCCceeEE
Q 021669 5 MSFRDYNGRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 5 ~~~~~h~~~V~~i~~s~~~~~l~-t~s~D~~v~iWd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~ 82 (309)
+.+.+=.+.++.++++|++..|. ....++.|...|.. ++.++.+... ......+++.+++.++++ +. + ++.+.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs-~E-~-~~~l~~ 95 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVIS-DE-R-DYAIYV 95 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEE-ET-T-TTEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEE-EC-C-CCcEEE
Confidence 45556667899999999876554 45567788888887 8877776432 123556777766654443 32 2 567888
Q ss_pred EEccCCceE---EEee------ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEE
Q 021669 83 LSLHDNKYL---RYFK------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVF 153 (309)
Q Consensus 83 ~d~~~~~~~---~~~~------~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (309)
+++.....+ .... ......-++++.|+++.|..+.......+|.+. +. .. ..
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~-g~----~~--~~------------ 156 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN-GL----LS--SN------------ 156 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE-ST----TC--SS------------
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc-cc----cc--CC------------
Confidence 887554322 2221 122345788898888777766655554555432 10 00 00
Q ss_pred EEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccC-CCEEEEEeCCCcEEEEECCCCeEeEEeeecCCC-----
Q 021669 154 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS----- 227 (309)
Q Consensus 154 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-g~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~----- 227 (309)
.+.+.+.... .-.....+...+++.|. |++++.....+.+..+|.. +..+..+......
T Consensus 157 ------~l~i~~~~~~--------~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~ 221 (255)
T 3qqz_A 157 ------ELHISKDKAL--------QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSH 221 (255)
T ss_dssp ------CCEEEECHHH--------HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSS
T ss_pred ------ceeeecchhh--------ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCccc
Confidence 0011000000 00011234578888885 5666667777888888864 6666655543211
Q ss_pred -CCccceEEECCCCCEEEEEcCCCcEEEEECC
Q 021669 228 -RNSTLEASFSPEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 228 -~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~ 258 (309)
....-.++|.|+|+.++ +++-..++++.-.
T Consensus 222 ~~~qpEGia~d~~G~lyI-vsE~n~~y~f~~~ 252 (255)
T 3qqz_A 222 NIKQAEGVAMDASGNIYI-VSEPNRFYRFTPQ 252 (255)
T ss_dssp CCCSEEEEEECTTCCEEE-EETTTEEEEEEC-
T ss_pred ccCCCCeeEECCCCCEEE-EcCCceEEEEEec
Confidence 01223589999998544 4777777777653
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.00 E-value=0.013 Score=56.32 Aligned_cols=210 Identities=8% Similarity=0.026 Sum_probs=112.8
Q ss_pred CcceEEEEeCCC-CCEEEEeeCCCcEEEEEcCCC----ceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEc
Q 021669 11 NGRISSMDFHKS-SSYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 85 (309)
Q Consensus 11 ~~~V~~i~~s~~-~~~l~t~s~D~~v~iWd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~ 85 (309)
-..+.+|+|++. +.++.+-...+.|+.+++... .....+...-.....+++.+.+..++++.. ..+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~--~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec--CCCeEEEEeC
Confidence 345668889884 445566666778888888642 222223322334567888888878887753 2678999998
Q ss_pred cCCceEEEeeecccCEEEEEecCCCC-eEEEecC-CCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEE
Q 021669 86 HDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSL-DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRM 163 (309)
Q Consensus 86 ~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~-Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 163 (309)
........+.......++|++.|.+. +++|-.. .+.|...++........+
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv--------------------------- 553 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV--------------------------- 553 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE---------------------------
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE---------------------------
Confidence 76544333344456688899988644 4444322 244555444322110000
Q ss_pred EECCCCCcCCceEEEeCCCCCCCeEEEEccCC-CEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCE
Q 021669 164 FDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 242 (309)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 242 (309)
.......+.|++++.+ +++++-...+.|..+|+........... .........+++.. ++.
T Consensus 554 ----------------~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~-~~~l~~P~glav~~-~~l 615 (791)
T 3m0c_C 554 ----------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED-EKRLAHPFSLAVFE-DKV 615 (791)
T ss_dssp ----------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC-TTTTSSEEEEEEET-TEE
T ss_pred ----------------eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecC-CCccCCCCEEEEeC-CEE
Confidence 0011234567777544 4444445566788887653332222211 11112233455532 344
Q ss_pred EEEEcCCCcEEEEECCCCceEEEee
Q 021669 243 VISGSGDGSVYAWSVRSGKEVASWM 267 (309)
Q Consensus 243 l~s~s~Dg~i~vwd~~~~~~~~~~~ 267 (309)
+++-...+.|...|..+++.+..+.
T Consensus 616 YwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 616 FWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEEECCCCEEEEEeCCCCcceEEee
Confidence 4455666788888877776655543
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.99 E-value=0.0073 Score=53.25 Aligned_cols=228 Identities=12% Similarity=0.068 Sum_probs=132.6
Q ss_pred CCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCC----ceEEEeeecccCEEEEEe
Q 021669 31 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFKGHHDRVVSLSL 106 (309)
Q Consensus 31 ~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~----~~~~~~~~h~~~v~~v~~ 106 (309)
....|+..|+........+.. ...+..++|.+....++++... .+.|+.+++... .....+........++++
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~~-~~~~~~l~~d~~~~~lywsD~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 166 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 166 (400)
T ss_dssp ETTEEEEECTTSCSCEEEECS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred ccceeEEEccCCcceeEeccc-cCcceEEeeeeccCceEEEecC--CCeEEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence 357888888876544433333 2346678898877888887532 568888888652 223333334456788888
Q ss_pred cC-CCCeEEEecCCCcEEEeeCCCceeeeeeeec--CceeEEECCC-CcEEEEEE--CCEEEEEECCCCCcCCceEEEeC
Q 021669 107 CS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDDQ-GLVFAVAF--GGYIRMFDARKYEKGPFDIFSVG 180 (309)
Q Consensus 107 ~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~ 180 (309)
.+ .++..++-...+.|.+.|+........+... .-..++.++. +.++-+.. .+.|...++..... .....
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~----~~~~~ 242 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----YSLVT 242 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC----EEEEC
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc----EEEEE
Confidence 87 4556667677889999988655433333211 1123455554 44443332 25677777643211 11122
Q ss_pred CCCCCCeEEEEccCCCE-EEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 181 GDISDANVVKFSNDGRL-MLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 181 ~~~~~~~~v~~s~dg~~-l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
......+.+++++++.. +++-...+.|..+|..... ...+............+++ ..++.+.+-...+.|..+|..+
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSS
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCC
Confidence 23345688999986654 4555567899999975433 3322211111123345666 3445666667778999999878
Q ss_pred CceEEEee
Q 021669 260 GKEVASWM 267 (309)
Q Consensus 260 ~~~~~~~~ 267 (309)
++.+..+.
T Consensus 321 G~~~~~i~ 328 (400)
T 3p5b_L 321 GSDVNLLA 328 (400)
T ss_dssp CCCCEEEE
T ss_pred CCceEEEe
Confidence 77666554
No 277
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.99 E-value=0.00017 Score=68.50 Aligned_cols=238 Identities=14% Similarity=0.102 Sum_probs=130.4
Q ss_pred CCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC----CceEEEeeecccCEEEEEe
Q 021669 31 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYLRYFKGHHDRVVSLSL 106 (309)
Q Consensus 31 ~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~----~~~~~~~~~h~~~v~~v~~ 106 (309)
..+.|+..++.+.+....+.... .+..+++.+....++++.. ..+.|+.+++.. ......+.........+++
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~-~p~gla~d~~~~~Ly~sD~--~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLR-NVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 460 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCT-TCCCCEEETTTTEEEECCT--TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC
T ss_pred CccceEEEeCCCCcceeeeccCc-ceEEEccccccCeEEEEec--CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE
Confidence 34678888887665544443332 3456788887777877643 256899999875 2222222222233456777
Q ss_pred cC-CCCeEEEecCCCcEEEeeCCCceeeeeeeec--CceeEEECCC-CcEEEEEEC--CEEEEEECCCCCcCCceEEEeC
Q 021669 107 CS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDDQ-GLVFAVAFG--GYIRMFDARKYEKGPFDIFSVG 180 (309)
Q Consensus 107 ~~-~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~ 180 (309)
.+ .++++++-...+.|.+.++........+... .-..+++++. +.++.+..+ +.|..+++..... ...+.
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~----~~l~~ 536 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----YSLVT 536 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC----CEESC
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe----eEEEe
Confidence 74 4556666667789999997655433332211 1123455543 333332222 5666665532111 11111
Q ss_pred CCCCCCeEEEEccC-CCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 181 GDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 181 ~~~~~~~~v~~s~d-g~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
......+.++++|+ ++++++-...+.|..+|+..... ..+............+++..+ +.+++....+.|..++..+
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTT
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccC
Confidence 12234567999986 56666777788999999864332 222211111122344566544 5555667778999999988
Q ss_pred CceEEEeecCCCCCcEEE
Q 021669 260 GKEVASWMSFDTEPPVIK 277 (309)
Q Consensus 260 ~~~~~~~~~~~~~v~~l~ 277 (309)
++.+..+......+..|+
T Consensus 615 G~~~~~i~~~~~~P~~i~ 632 (699)
T 1n7d_A 615 GSDVNLLAENLLSPEDMV 632 (699)
T ss_dssp EEEEECCCTTCSSCCCCC
T ss_pred CCceEEeecCCCCCcEEE
Confidence 877766543222344444
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.97 E-value=0.0087 Score=53.35 Aligned_cols=235 Identities=10% Similarity=0.120 Sum_probs=129.1
Q ss_pred eeEEEEecC--CCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCC---Cc-EEEeeCCC
Q 021669 56 VDLVCFTSH--PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD---RT-VLLWDQRA 129 (309)
Q Consensus 56 v~~~~~~~~--~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~D---g~-v~~Wd~~~ 129 (309)
...+++.++ ...++++.. + +.|+.+|+.+++.. .+.+.......+++.++++.+++.... .. +...+...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~-~--~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQ-R--DAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCEEEECTTTTTCEEEEECB-T--SCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CceEEEccccCCCEEEEEeC-C--CCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 346778774 445555532 2 68999999877644 344455678999999999965554321 12 22222211
Q ss_pred cee-eeeee-ecCceeEEECC-CCcEEEEE-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCC-EEEEEeCC
Q 021669 130 EKC-QGLLR-VQGRPAAAYDD-QGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTME 204 (309)
Q Consensus 130 ~~~-~~~~~-~~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~d 204 (309)
... ...+. ...-...+.++ .+.++.+. .++.|+.+|...... ...+..... ......++++|+|+ ++++-...
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~-~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL-TEEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE-EEEEEECSC-CSSCEEEEECTTSSEEEEEETTT
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE-EEEEeccCC-CCCcccEEEeCCCCEEEEEeCCC
Confidence 110 00111 11112345555 55555443 357888888653211 011222222 22234699999998 66666778
Q ss_pred CcEEEEECC--CCeEe--EEeeec-C-----------CCCCccceEEE---------CCCCCEEEEEcCCCcEEEEECCC
Q 021669 205 GHIHVLDSF--RGTLL--STYNVK-P-----------VSRNSTLEASF---------SPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 205 g~v~i~d~~--~~~~~--~~~~~~-~-----------~~~~~~~~~~~---------sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
+.|+.+|.. ++... ..+... . ..-.....+++ .++|+.+++=.....|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 899998854 33221 111110 0 00122445888 778888888788889999985 5
Q ss_pred CceEEEeecCC------------------CCCcEEEEC-CCeeEEEEccceEEEeeec
Q 021669 260 GKEVASWMSFD------------------TEPPVIKWT-PGSLMFVTGSSELSFWIPD 298 (309)
Q Consensus 260 ~~~~~~~~~~~------------------~~v~~l~~~-p~~~~l~s~~~d~~~~~~~ 298 (309)
++ +.++.+.. ..+..|++. +++.++++-....++...+
T Consensus 374 G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 374 GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 53 43433221 124569999 6777777655544444433
No 279
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.85 E-value=0.0018 Score=62.07 Aligned_cols=193 Identities=9% Similarity=0.084 Sum_probs=99.4
Q ss_pred CEEEEEec-CCCCeEEEe-cCC----CcEEEeeCCCc-eeee-eeeecCceeEEECCCC-cEEEEEEC-----CEEEEEE
Q 021669 100 RVVSLSLC-SSKDCFISG-SLD----RTVLLWDQRAE-KCQG-LLRVQGRPAAAYDDQG-LVFAVAFG-----GYIRMFD 165 (309)
Q Consensus 100 ~v~~v~~~-~~~~~l~s~-s~D----g~v~~Wd~~~~-~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-----~~i~~~d 165 (309)
.+....|+ |||++|+-+ +.+ .+|+++|+.++ +... .+.. ......+++++ .++.+..+ ..|..++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57889999 999987733 222 35999999887 5221 1111 11234566666 44445554 2577777
Q ss_pred CCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC---CCcEEEEECCCCe-Ee--EEeeecCCCCCccceEEECCC
Q 021669 166 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM---EGHIHVLDSFRGT-LL--STYNVKPVSRNSTLEASFSPE 239 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~---dg~v~i~d~~~~~-~~--~~~~~~~~~~~~~~~~~~sp~ 239 (309)
+.........++.... ..-...+.+||||++|+.... ...|+++|+.++. .. ..+. .........+.|+.
T Consensus 254 lgt~~~~~~lv~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~s~~~~~- 329 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHN-PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR--PREKGVRYDVQMHG- 329 (751)
T ss_dssp TTSCGGGCEEEEECCC-TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS--CCCTTCCEEEEEET-
T ss_pred CCCCchhcEEEEecCC-CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee--cCCCCceEEEeeee-
Confidence 7543221222222211 122356789999999887653 3468888987652 11 2211 11122233344433
Q ss_pred CCEE-EEEcCC----CcEEEEECCCCceEEE-eecCCCC--CcEEEECCCeeEEEEccce--EEEeeec
Q 021669 240 GMFV-ISGSGD----GSVYAWSVRSGKEVAS-WMSFDTE--PPVIKWTPGSLMFVTGSSE--LSFWIPD 298 (309)
Q Consensus 240 g~~l-~s~s~D----g~i~vwd~~~~~~~~~-~~~~~~~--v~~l~~~p~~~~l~s~~~d--~~~~~~~ 298 (309)
|+.| +....+ ..|..+|+.++..... +..+... +..+.+. ++.++++...+ .++|..+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence 5544 444443 2677777764222222 3334332 3344544 23444554443 4556554
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.83 E-value=0.012 Score=50.68 Aligned_cols=203 Identities=7% Similarity=0.036 Sum_probs=120.4
Q ss_pred ceEEEEeCCCC-CEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 13 RISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 13 ~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
.+..++|++.. .++.+-...+.|..++.+.+.....+.........+++.+.+..++++.. ..+.|.+.++......
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--GTSRIEVANLDGAHRK 151 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEETTSCSCE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC--CCCeEEEEcCCCCceE
Confidence 35788998754 45556556788888888765433333322233467788877777777643 2568999998765433
Q ss_pred EEeeecccCEEEEEecCCCC-eEEEecCC-CcEEEeeCCCceeeeeee--ecCceeEEECCCC-cEEEEE-ECCEEEEEE
Q 021669 92 RYFKGHHDRVVSLSLCSSKD-CFISGSLD-RTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVA-FGGYIRMFD 165 (309)
Q Consensus 92 ~~~~~h~~~v~~v~~~~~~~-~l~s~s~D-g~v~~Wd~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~-~~~~i~~~d 165 (309)
..+.......+++++.|.+. .+++-... +.|...++........+. ...-...++++.+ .++-+- ..+.|..+|
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 33334446789999998544 55555545 788888875433222211 1112345666444 333332 347888888
Q ss_pred CCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 166 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
+..... ..+ +.........+++ .++.++++-...+.|..+|..+|+....+.
T Consensus 232 ~dG~~~---~~~-~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 232 LDGSHR---KAV-ISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TTSCSC---EEE-ECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCce---EEE-EeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 753211 111 1122234466777 466777777788889888876776655543
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.81 E-value=0.0096 Score=48.94 Aligned_cols=201 Identities=6% Similarity=0.074 Sum_probs=115.0
Q ss_pred EeeecccCEEEEEecCCCCeEEE-ecCCCcEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEEEE-ECCEEEEEECC
Q 021669 93 YFKGHHDRVVSLSLCSSKDCFIS-GSLDRTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVA-FGGYIRMFDAR 167 (309)
Q Consensus 93 ~~~~h~~~v~~v~~~~~~~~l~s-~s~Dg~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~d~~ 167 (309)
.+.|-.+.+.+++++|+++.|.+ ...++.|...|.. ++....+...+ ....++..++.++.+. .++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34455568999999998775554 5567888888886 66666654432 2234555556544333 34678888764
Q ss_pred CCCc-CCceEEEe----CCCCCCCeEEEEccCCCEEEEEeCCC--cEEEEECC-CCeEeEEeee----cCCCCCccceEE
Q 021669 168 KYEK-GPFDIFSV----GGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSF-RGTLLSTYNV----KPVSRNSTLEAS 235 (309)
Q Consensus 168 ~~~~-~~~~~~~~----~~~~~~~~~v~~s~dg~~l~~~~~dg--~v~i~d~~-~~~~~~~~~~----~~~~~~~~~~~~ 235 (309)
.... ........ .........++++|++..|.++.... .|+.|+.. ....+..... ..........++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 3221 01111211 11234568999999986666555443 45555521 1111111111 011223456799
Q ss_pred ECCCC-CEEEEEcCCCcEEEEECCCCceEEEeecCC---------CCCcEEEECCCeeEEEEccceEEEee
Q 021669 236 FSPEG-MFVISGSGDGSVYAWSVRSGKEVASWMSFD---------TEPPVIKWTPGSLMFVTGSSELSFWI 296 (309)
Q Consensus 236 ~sp~g-~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~---------~~v~~l~~~p~~~~l~s~~~d~~~~~ 296 (309)
|.|.. ++++.......+.++|.. ++.+..+.-.. .+.-.|+|.|+|+++++.-. -.+|.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~ 248 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYR 248 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEE
Confidence 99964 555566667788999975 55555443221 13456999999998877433 35554
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.81 E-value=0.015 Score=51.01 Aligned_cols=203 Identities=7% Similarity=0.027 Sum_probs=119.2
Q ss_pred ceEEEEeCCCC-CEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 13 RISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 13 ~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
....++|++.+ .++.+-...+.|..++.+.+.....+.........+++.+.+..++++.. ..+.|.+.++......
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~--~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--GTSRIEVANLDGAHRK 194 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET--TTTEEEECBTTSCSCE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC--CCCeEEEEeCCCCceE
Confidence 46688999754 45556566788888988765433333322223456788877777777643 2567888888755433
Q ss_pred EEeeecccCEEEEEecCCCC-eEEEecCC-CcEEEeeCCCceeeeeeee--cCceeEEECCCC-cEEEEE-ECCEEEEEE
Q 021669 92 RYFKGHHDRVVSLSLCSSKD-CFISGSLD-RTVLLWDQRAEKCQGLLRV--QGRPAAAYDDQG-LVFAVA-FGGYIRMFD 165 (309)
Q Consensus 92 ~~~~~h~~~v~~v~~~~~~~-~l~s~s~D-g~v~~Wd~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~-~~~~i~~~d 165 (309)
..+........++++.|.+. .+++-..+ +.|...++........... ..-..+++++.+ .++.+- ..+.|..+|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 33444446789999998655 44554444 7788888754332222111 112345555433 333332 347888888
Q ss_pred CCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 166 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
+.... ...+ +.........+++ .++.++++....+.|..+|..+|+.+..+.
T Consensus 275 ~dG~~--~~~~--~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSH--RKAV--ISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCS--CEEE--ECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCe--eEEE--EECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 65321 1111 1112234466777 456777777788899999877776665554
No 283
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.73 E-value=0.016 Score=49.13 Aligned_cols=205 Identities=8% Similarity=0.042 Sum_probs=117.7
Q ss_pred cceEEEEeCCCC-CEEEEeeCCCcEEEEEcCC---Cceeee-eeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc
Q 021669 12 GRISSMDFHKSS-SYLVTASDDESIRLYDVTA---ATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 86 (309)
Q Consensus 12 ~~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~---~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~ 86 (309)
....+++|++++ .+..+-...+.|..+|..+ +..... +...-.....+++.+.+..++++.. ..+.|.+.++.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~--~~~~I~~~~~~ 107 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVADTK 107 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC--CCCEEEEEeCC
Confidence 345689999865 4556666678999999875 222222 2222223567888776677776643 26789999987
Q ss_pred CCceEEEeeecccCEEEEEecCCCC-eEEEecCC-CcEEEeeCCCceeeeeee--ecCceeEEECCCC-cEEEEE-ECCE
Q 021669 87 DNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLD-RTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVA-FGGY 160 (309)
Q Consensus 87 ~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~D-g~v~~Wd~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~-~~~~ 160 (309)
.......+........++++.|.+. .+++-... +.|...++.......... ...-...++++.+ .++.+. ..+.
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 6543333333446788999998655 44444333 678887775432221111 1122345566444 333333 3468
Q ss_pred EEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEe
Q 021669 161 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 221 (309)
Q Consensus 161 i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~ 221 (309)
|..+|+.... ...+............+++. ++.++++....+.|..+|..+++.+..+
T Consensus 188 I~~~d~dg~~--~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 188 ISSIDVNGGN--RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTSCS--CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCc--eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 9999875321 11122221222334567775 4677777778889999998777665544
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.72 E-value=0.018 Score=49.38 Aligned_cols=197 Identities=12% Similarity=0.227 Sum_probs=114.6
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEec----CCCE--EEEEcCCCC--CceeEEEEc--cCCceE
Q 021669 22 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS----HPTT--VIYSSKNGW--DESLRLLSL--HDNKYL 91 (309)
Q Consensus 22 ~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--~~~~s~~g~--d~~i~~~d~--~~~~~~ 91 (309)
..+++++....+-+.+||+ +|+.++.+... .+..+...+ .++. +++++. .. ++++++|++ .+++ +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g--~~nnVD~r~~~~l~g~~~dla~as~-R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTG--KLNNVDIRYDFPLNGKKVDIAAASN-RSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCS--CEEEEEEEEEEEETTEEEEEEEEEE-CSTTCCEEEEEEECTTTCC-E
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCC--CcccEEEecccccCCceEeEEEEeC-CCCCCCeEEEEEECCCCCc-e
Confidence 3466777778889999999 89999888642 233333333 3332 445543 33 678999977 4443 4
Q ss_pred EEeee------cc-cCEEEEEe--cCC-CC-eEEEecCCCcEEEeeCC-------CceeeeeeeecCce-eEEECCC-Cc
Q 021669 92 RYFKG------HH-DRVVSLSL--CSS-KD-CFISGSLDRTVLLWDQR-------AEKCQGLLRVQGRP-AAAYDDQ-GL 151 (309)
Q Consensus 92 ~~~~~------h~-~~v~~v~~--~~~-~~-~l~s~s~Dg~v~~Wd~~-------~~~~~~~~~~~~~~-~~~~~~~-~~ 151 (309)
..+.. .. ..+..+++ +|. ++ ++.....+|.+..|++. +.+.+..+.+...+ .+.+++. +.
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 44422 11 56677888 664 44 57777788999999873 23444555554433 3455544 44
Q ss_pred EEEEEECCEEEEEECCCCCcCCce-EEEeC-CCC-CCCeEEEE--ccCCC-EEEEEe-CCCcEEEEECC-CCeEeEEeee
Q 021669 152 VFAVAFGGYIRMFDARKYEKGPFD-IFSVG-GDI-SDANVVKF--SNDGR-LMLLTT-MEGHIHVLDSF-RGTLLSTYNV 223 (309)
Q Consensus 152 ~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~-~~~-~~~~~v~~--s~dg~-~l~~~~-~dg~v~i~d~~-~~~~~~~~~~ 223 (309)
++..-.+..|-.++.+........ +.... ++. .++..+++ .++|+ +|++.+ .+....+||.. +.+.+..|.+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 444444545555554322111111 22221 222 36777777 56655 454444 67899999986 6677777654
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.68 E-value=0.02 Score=48.72 Aligned_cols=226 Identities=12% Similarity=0.061 Sum_probs=128.4
Q ss_pred CCcEEEEEcCCCce-eeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce-EEEeeecccCEEEEEecC-
Q 021669 32 DESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCS- 108 (309)
Q Consensus 32 D~~v~iWd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~-~~~~~~h~~~v~~v~~~~- 108 (309)
...|+..|++.... ...+.........+.|.+....++++.. ..+.|..+++..+.. ...+........++++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~--~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV--SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET--TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC--CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 57889999986532 1112111123456788877777877753 257888899876532 222333334566788876
Q ss_pred CCCeEEEecCCCcEEEeeCCCceeeeeeeec-Cc-eeEEECCC-CcEEEEEE--CCEEEEEECCCCCcCCceEEEeCCCC
Q 021669 109 SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-GR-PAAAYDDQ-GLVFAVAF--GGYIRMFDARKYEKGPFDIFSVGGDI 183 (309)
Q Consensus 109 ~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~ 183 (309)
.++..++-...+.|.+.++........+... .. ...+.++. +.++-+.. .+.|..+++.... .........
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----~~~~~~~~l 165 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS----RFIIINSEI 165 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS----CEEEECSSC
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC----eEEEEECCC
Confidence 4556667677789999987654322222111 11 23445543 44443332 3677777764211 111112223
Q ss_pred CCCeEEEEccCC-CEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 021669 184 SDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 262 (309)
Q Consensus 184 ~~~~~v~~s~dg-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~ 262 (309)
...+.++++|++ +++++-...+.|..+|..... ...+.. ........+++. .+..+.+-...+.|..++..+++.
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~--~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVK--GSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC--SCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEec--CCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCc
Confidence 345789999855 555666677899999976332 222221 112233456664 345566667778999999988776
Q ss_pred EEEee
Q 021669 263 VASWM 267 (309)
Q Consensus 263 ~~~~~ 267 (309)
...+.
T Consensus 242 ~~~i~ 246 (318)
T 3sov_A 242 LREIH 246 (318)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 55543
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.66 E-value=0.021 Score=48.68 Aligned_cols=267 Identities=11% Similarity=0.064 Sum_probs=134.6
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec----cccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS----KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 86 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~ 86 (309)
...+.+|.|.+++..++ ++.++.| +...+.|+.-+.+.. ....+..+.+.+ ..++++.. ++.+.. ...
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~---~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGE---PPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEEE---TTEEEE-ESS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEEC---CCeEEE-ECC
Confidence 45789999988777777 4567765 444455543322211 233466777764 33333321 233322 222
Q ss_pred CCceEEEee---ecccCEEEEEecCCCCeEEEecCCCcE-EEeeCCCceeeeeeee--c-CceeEEECCCCcEEEEEECC
Q 021669 87 DNKYLRYFK---GHHDRVVSLSLCSSKDCFISGSLDRTV-LLWDQRAEKCQGLLRV--Q-GRPAAAYDDQGLVFAVAFGG 159 (309)
Q Consensus 87 ~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s~Dg~v-~~Wd~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 159 (309)
.|+.-.... .+.+.+..+.+.++++.++.+. ++.+ +-+| .++.-..+.. . ......+.+++.+++.+..+
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G 183 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRG 183 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTS
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCC
Confidence 233222211 2345677787777666665554 5554 4433 1221111111 1 12234555667777766555
Q ss_pred EEEE-EECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC-CCCccceEEEC
Q 021669 160 YIRM-FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEASFS 237 (309)
Q Consensus 160 ~i~~-~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~s 237 (309)
.+.. .|-. . ....... ......+..+.++++++.++. +.+|.+++.+...+..-........ ....+..+.+.
T Consensus 184 ~~~~S~d~g-G--~tW~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 184 SFYSTWEPG-Q--TAWEPHN-RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp SEEEEECTT-C--SSCEEEE-CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred cEEEEeCCC-C--CceeECC-CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 4433 2210 0 0111111 122345677888999987654 4678777764222332222221101 11246678899
Q ss_pred CCCCEEEEEcCCCcEEEEECCCCceEEEee---cCCCCCcEEEECCCeeEEEEccceEEEee
Q 021669 238 PEGMFVISGSGDGSVYAWSVRSGKEVASWM---SFDTEPPVIKWTPGSLMFVTGSSELSFWI 296 (309)
Q Consensus 238 p~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~---~~~~~v~~l~~~p~~~~l~s~~~d~~~~~ 296 (309)
|+++.++.+. ++.+ .+....++.-..+. .+...+.+++|.++++.++.|. +..++.
T Consensus 259 ~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~ 317 (327)
T 2xbg_A 259 TPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ-KGILLR 317 (327)
T ss_dssp SSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS-TTEEEE
T ss_pred CCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC-CceEEE
Confidence 8888777665 6766 34454443322222 2345788999987777665554 434443
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.65 E-value=0.032 Score=50.39 Aligned_cols=248 Identities=11% Similarity=0.148 Sum_probs=138.4
Q ss_pred eEEEEeCCC--CCEEEEeeCCCcEEEEEcCCCceeeeeeccc---cceeEEEE-------ecCCCEEEEEcCCCC----C
Q 021669 14 ISSMDFHKS--SSYLVTASDDESIRLYDVTAATCLKTINSKK---YGVDLVCF-------TSHPTTVIYSSKNGW----D 77 (309)
Q Consensus 14 V~~i~~s~~--~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~---~~v~~~~~-------~~~~~~~~~~s~~g~----d 77 (309)
-..|+|+|. ++++++-...+.|++.|..++.....+.... .....++| .+++..++++...+. .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 458899983 4455555445678888988766554443321 23677899 999987776654321 1
Q ss_pred ceeEEEEccC-CceE-----EEeeecccCEEEEEecCC-CCeEEEecCCCcEEEeeCC-------Ccee-----------
Q 021669 78 ESLRLLSLHD-NKYL-----RYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQR-------AEKC----------- 132 (309)
Q Consensus 78 ~~i~~~d~~~-~~~~-----~~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~-------~~~~----------- 132 (309)
..+.+.+... ++.. ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 2355665443 2221 222222 23457788995 5556677788889999986 3432
Q ss_pred e-eeeeecC---ceeEEECCCCcEEEEE--ECCEEEEEECCCCCc---CCceEEEe---CC---------CCCCCe-EEE
Q 021669 133 Q-GLLRVQG---RPAAAYDDQGLVFAVA--FGGYIRMFDARKYEK---GPFDIFSV---GG---------DISDAN-VVK 190 (309)
Q Consensus 133 ~-~~~~~~~---~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~---~~~~~~~~---~~---------~~~~~~-~v~ 190 (309)
. ....... ...+++++++..+..+ ....|+.++...... .+..+... .+ ...... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 0 1122221 1246778887744444 357888866432110 00001110 00 111223 455
Q ss_pred Ec-------cCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC---------------------CCCccceEEECCC-CC
Q 021669 191 FS-------NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV---------------------SRNSTLEASFSPE-GM 241 (309)
Q Consensus 191 ~s-------~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~---------------------~~~~~~~~~~sp~-g~ 241 (309)
.. ++|.++++-..+.+|+.++. +|.. .++-.... .-.....+++.++ |.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeC-CCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 55 67888888888999999984 5643 33321100 0123456888886 66
Q ss_pred EEEEEcCCCcEEEEECCCCceEE
Q 021669 242 FVISGSGDGSVYAWSVRSGKEVA 264 (309)
Q Consensus 242 ~l~s~s~Dg~i~vwd~~~~~~~~ 264 (309)
.+++=.....|+.+++.....+.
T Consensus 458 lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC---
T ss_pred EEEEeCCCCEEEEEECCCCcccc
Confidence 66666777788888887655544
No 288
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.55 E-value=0.087 Score=52.82 Aligned_cols=277 Identities=10% Similarity=0.101 Sum_probs=144.3
Q ss_pred CcceEEEEeCCC------CCEEEEeeC-CCcEEEEEcCCCceeee--eeccccceeEEEEe--cCCCEEEEEcCCCCCce
Q 021669 11 NGRISSMDFHKS------SSYLVTASD-DESIRLYDVTAATCLKT--INSKKYGVDLVCFT--SHPTTVIYSSKNGWDES 79 (309)
Q Consensus 11 ~~~V~~i~~s~~------~~~l~t~s~-D~~v~iWd~~~~~~~~~--~~~~~~~v~~~~~~--~~~~~~~~~s~~g~d~~ 79 (309)
..+|.|+++.|. ++++|.|.+ |++|+|+++.+.+.+.. +... .....+++. ....+++.+-. |+.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~---dG~ 628 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE-IIPRSILMTTFESSHYLLCALG---DGA 628 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS-CCEEEEEEEEETTEEEEEEEET---TSE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeC---CCe
Confidence 468999999863 368999998 99999999987665533 2211 122223222 12224454443 555
Q ss_pred eEEEEc--cCCceE---EEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCceee-eeeeecCc-eeEEECC---
Q 021669 80 LRLLSL--HDNKYL---RYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQ-GLLRVQGR-PAAAYDD--- 148 (309)
Q Consensus 80 i~~~d~--~~~~~~---~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~-~~~~~~~~-~~~~~~~--- 148 (309)
+..+.+ .+++.. ..+-| ..+++=..+...+. .+...| |+...++--+ ++.. ..+..... ..+.+..
T Consensus 629 l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~ 705 (1158)
T 3ei3_A 629 LFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGY 705 (1158)
T ss_dssp EEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSS
T ss_pred EEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEEeccChHHhceEeccCcccC
Confidence 544443 344422 12223 22333333333333 233333 5555554322 2211 11111111 1223321
Q ss_pred CCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeC-------------------------
Q 021669 149 QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM------------------------- 203 (309)
Q Consensus 149 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~------------------------- 203 (309)
.+.++ ...++.+++..+.... .+.+..+.-. ..+..++++|+.+.++....
T Consensus 706 ~~g~v-~~~~~~LrI~~i~~~~--~~~~~~ipL~-~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1158)
T 3ei3_A 706 PDSLA-LANNSTLTIGTIDEIQ--KLHIRTVPLY-ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSS 781 (1158)
T ss_dssp TTEEE-EECSSCEEEEEECCSS--SEEEEEEECS-SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEE
T ss_pred CCcEE-EEcCCceEEEEecccC--CeeEEEEeCC-CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhh
Confidence 23343 4446668888775442 3333322111 24566677776655443321
Q ss_pred ------------------------CCcEEEEECCCCeEeEEeeecCCCC-CccceEEECCC-CCEEEEEc----------
Q 021669 204 ------------------------EGHIHVLDSFRGTLLSTYNVKPVSR-NSTLEASFSPE-GMFVISGS---------- 247 (309)
Q Consensus 204 ------------------------dg~v~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~sp~-g~~l~s~s---------- 247 (309)
-..|+++|..+.+.+..++...... .++..+.|..+ ..+++.|.
T Consensus 782 ~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~ 861 (1158)
T 3ei3_A 782 SVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEP 861 (1158)
T ss_dssp EECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSC
T ss_pred cccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCC
Confidence 1247788888888777776543211 11222335433 46887775
Q ss_pred CCCcEEEEECCCCceEEEe--ecCCCCCcEEEECCCeeEEEEccceEEEeeecCC
Q 021669 248 GDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 300 (309)
Q Consensus 248 ~Dg~i~vwd~~~~~~~~~~--~~~~~~v~~l~~~p~~~~l~s~~~d~~~~~~~~~ 300 (309)
.-|.|+++++..+ +++.+ ....+.+++|+- -+|++++..+.-+++|.+...
T Consensus 862 ~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~-~~g~Lla~ig~~l~vy~l~~~ 914 (1158)
T 3ei3_A 862 KQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVE-FNGKLLASINSTVRLYEWTTE 914 (1158)
T ss_dssp CCEEEEEEEEETT-EEEEEEEEEESSCEEEEEE-ETTEEEEEETTEEEEEEECTT
T ss_pred CceEEEEEEEECC-EEEEEEEEEcCCcCEEEee-eCCEEEEEcCCEEEEEECCCC
Confidence 3478999999744 33222 234567788772 256888888888999988644
No 289
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.49 E-value=0.046 Score=48.08 Aligned_cols=207 Identities=8% Similarity=-0.001 Sum_probs=119.5
Q ss_pred CcceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCc----eeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEc
Q 021669 11 NGRISSMDFHKSSS-YLVTASDDESIRLYDVTAAT----CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 85 (309)
Q Consensus 11 ~~~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~ 85 (309)
-..+..++|++.+. +..+-...+.|..+++.... ....+...-.....+++.+.+..++++.. ..+.|.+.++
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~--~~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEECT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC--CCCeEEEEeC
Confidence 35677899998544 55555567888888886421 22222222334567888876677777643 2578999998
Q ss_pred cCCceEEEeeecccCEEEEEecCCCC-eEEEec-CCCcEEEeeCCCceeeeeeee--cCceeEEECCCCcEEEEEE--CC
Q 021669 86 HDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGS-LDRTVLLWDQRAEKCQGLLRV--QGRPAAAYDDQGLVFAVAF--GG 159 (309)
Q Consensus 86 ~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s-~Dg~v~~Wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~ 159 (309)
........+.......+++++.|.+. +++|-. ..+.|...++........+.. ..-..+++++.+..+..+. .+
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 76654444444455689999998554 445542 246788888754332222211 1123455664443333332 46
Q ss_pred EEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 160 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
.|..+|+.... ...+............+++ .++.++++....+.|..+|..+|+.+..+.
T Consensus 269 ~I~~~d~dG~~--~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 269 SISSIDVNGGN--RKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEEEETTSCC--CEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEEEeCCCCc--cEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 88888875321 1112222122234456666 345667777778899999977777665543
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.44 E-value=0.018 Score=49.02 Aligned_cols=154 Identities=12% Similarity=0.140 Sum_probs=96.9
Q ss_pred EEEecCCCC-eEEEecCCCcEEEeeCCCceeeeeeeecC---------c-eeEEE---CCCCcEEEEEE-----------
Q 021669 103 SLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQG---------R-PAAAY---DDQGLVFAVAF----------- 157 (309)
Q Consensus 103 ~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~---------~-~~~~~---~~~~~~~~~~~----------- 157 (309)
++.|.+... +.++.-..++|..||...+..... .... . ..+.. ++.+.++.+..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 567776444 455555899999999875543322 2221 1 23456 46677776544
Q ss_pred ---CCEEEEEECC---CCCcCCceEEEeCC-----------CCCCCeEEEEccCCCEEEEEeCC-CcEEEEECCCCeEeE
Q 021669 158 ---GGYIRMFDAR---KYEKGPFDIFSVGG-----------DISDANVVKFSNDGRLMLLTTME-GHIHVLDSFRGTLLS 219 (309)
Q Consensus 158 ---~~~i~~~d~~---~~~~~~~~~~~~~~-----------~~~~~~~v~~s~dg~~l~~~~~d-g~v~i~d~~~~~~~~ 219 (309)
+..+..||+. +.+. .....+.. .....+.++..++|+..++++.. +.|..++.... .+.
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~--~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKP--VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCC--SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cCCCCEEEEEcCCcCCCCCE--EEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 4678999987 3221 11122210 11236788999999999999888 88888887533 333
Q ss_pred EeeecC-C--CCCccceEEECCCCCEEEEEcCCCcEEEEECCCC
Q 021669 220 TYNVKP-V--SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 260 (309)
Q Consensus 220 ~~~~~~-~--~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~ 260 (309)
.+.... . .......++++|+|+.|+....++.+..+|+.+.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 322111 0 1112347899999999999877999999999753
No 291
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.42 E-value=0.04 Score=48.43 Aligned_cols=136 Identities=13% Similarity=0.216 Sum_probs=85.3
Q ss_pred EEECCEEEEEECCCCCcCCceEEEeCC--CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe------------EeEE
Q 021669 155 VAFGGYIRMFDARKYEKGPFDIFSVGG--DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT------------LLST 220 (309)
Q Consensus 155 ~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~------------~~~~ 220 (309)
...++.||.-++... ..|+.+.... ...++..+..||+|++||..+ +..|.|..+..+. ....
T Consensus 37 ~a~~n~iR~~~i~~~--~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~t 113 (452)
T 3pbp_A 37 FIQDNIIRWYNVLTD--SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFH 113 (452)
T ss_dssp EEETTEEEEEETTTC--SSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEE
T ss_pred EEECCEEEEEECCCC--CcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeE
Confidence 344566676665432 2455555542 334678899999999998874 5578887765221 1223
Q ss_pred eeecCC---CCCccceEEECCC---CCEEEEEcCCCcEEEEECCCCc--eEEEee---------cCCCCCcEEEECCCee
Q 021669 221 YNVKPV---SRNSTLEASFSPE---GMFVISGSGDGSVYAWSVRSGK--EVASWM---------SFDTEPPVIKWTPGSL 283 (309)
Q Consensus 221 ~~~~~~---~~~~~~~~~~sp~---g~~l~s~s~Dg~i~vwd~~~~~--~~~~~~---------~~~~~v~~l~~~p~~~ 283 (309)
+...+. ...+|..+.|+|- +..|++-..|++|++||+.... +. .+. .....+.+++|.+++-
T Consensus 114 y~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 114 YSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp EEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSS
T ss_pred EEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCc
Confidence 443221 2356888999994 5799999999999999997622 22 221 1224677899999874
Q ss_pred --EEEEccc--eEEE
Q 021669 284 --MFVTGSS--ELSF 294 (309)
Q Consensus 284 --~l~s~~~--d~~~ 294 (309)
++++... |++.
T Consensus 193 TLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 193 TLYCLNTTEGGDIFA 207 (452)
T ss_dssp CEEEEECTTSCEEEE
T ss_pred EEEEEecCCCCCEEE
Confidence 4444333 4443
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.41 E-value=0.0024 Score=60.61 Aligned_cols=205 Identities=8% Similarity=0.042 Sum_probs=112.3
Q ss_pred ceEEEEeCCCCCEE-EEeeCCCcEEEEEcCC----CceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC
Q 021669 13 RISSMDFHKSSSYL-VTASDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 87 (309)
Q Consensus 13 ~V~~i~~s~~~~~l-~t~s~D~~v~iWd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~ 87 (309)
.+..|+|++.+..| ++-...+.|+.+++.+ ......+...-.....+++.+.+..++++.. ..+.|.+.++..
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~--~~~~I~v~d~dg 484 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVADTKG 484 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT--TTSCEEEEBSSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec--cCCeEEEEecCC
Confidence 35578888865554 4445567888888875 2222222221122455777765666666532 257899999876
Q ss_pred CceEEEeeecccCEEEEEecCCCC-eEEEecCC-CcEEEeeCCCceeeeee--eecCceeEEECCCC-cEEEEE-ECCEE
Q 021669 88 NKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLD-RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVA-FGGYI 161 (309)
Q Consensus 88 ~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~D-g~v~~Wd~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~-~~~~i 161 (309)
......+.........+++.|.+. ++++-... +.|...++........+ .+..-..+++++.+ .++.+- ..+.|
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 543333333334567888988644 44544333 67887776533221111 11112345666543 333333 35788
Q ss_pred EEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEee
Q 021669 162 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 222 (309)
Q Consensus 162 ~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~ 222 (309)
..+++.... ...+............+++..+ .++++....+.|..+|..+++.+..+.
T Consensus 565 ~~~d~dG~~--~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 565 SSIDVNGGN--RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEECSSSSC--CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEccCCCc--eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 888875321 1111111111222344566554 566666778899999988888776553
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.33 E-value=0.059 Score=45.86 Aligned_cols=234 Identities=9% Similarity=0.051 Sum_probs=114.8
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec---cccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS---KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 87 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~ 87 (309)
...+.+|.|++ +..++ ++.++.|.. ..+.|+.-+.+.. ....+..+.+.+++..++.+. ++.+.. ....
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~g~v~~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN----VGAIYR-TKDS 150 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET----TCCEEE-ESST
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC----CccEEE-EcCC
Confidence 44688999986 44444 455665433 3344544333221 122344555555554444332 222211 1222
Q ss_pred Cce-EEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeC--CCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEE
Q 021669 88 NKY-LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ--RAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMF 164 (309)
Q Consensus 88 ~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 164 (309)
|+. .....++...+..+.+.++++.++.+...+..+-+|- ++=+............+.+.+++.++.++.++.+++.
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEe
Confidence 332 2223345667899999998887776654444444542 1111111100111223445666777777777777665
Q ss_pred ECCCCCcCCceEEEeC--CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCE
Q 021669 165 DARKYEKGPFDIFSVG--GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 242 (309)
Q Consensus 165 d~~~~~~~~~~~~~~~--~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 242 (309)
+....+ ........ .....+..+.+.++++.++++. +|.+.. ....|..-............+..+.|.+++ .
T Consensus 231 ~~D~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~ 305 (327)
T 2xbg_A 231 DPDNSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALLC-SQDGGQTWQQDVDVKKVPSNFYKILFFSPD-Q 305 (327)
T ss_dssp ETTEEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEEE-ESSTTSSCEECGGGTTSSSCCCEEEEEETT-E
T ss_pred cCCCCC--eeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEEE-eCCCCcccEEcCccCCCCCCeEEEEEECCC-c
Confidence 311000 00000000 0112467788888888776654 676643 333343333222111112345678887555 4
Q ss_pred EEEEcCCCcEEEEEC
Q 021669 243 VISGSGDGSVYAWSV 257 (309)
Q Consensus 243 l~s~s~Dg~i~vwd~ 257 (309)
+++++.+|.|.-++-
T Consensus 306 ~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 306 GFILGQKGILLRYVT 320 (327)
T ss_dssp EEEECSTTEEEEECC
T ss_pred eEEEcCCceEEEEcC
Confidence 667778897776654
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.27 E-value=0.043 Score=47.10 Aligned_cols=185 Identities=11% Similarity=0.169 Sum_probs=102.5
Q ss_pred CCeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECC----CCc---EEEEE-E---CCEEEEEECCCCCcCCceEEE
Q 021669 110 KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDD----QGL---VFAVA-F---GGYIRMFDARKYEKGPFDIFS 178 (309)
Q Consensus 110 ~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~-~---~~~i~~~d~~~~~~~~~~~~~ 178 (309)
..+++....++-+.++|+ +++.+..+.....+.+..-+ .+. ++.++ . ++.|.+|++.... .++....
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~-~~l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN-GTLQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT-CCEEECS
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC-Cceeecc
Confidence 345666667788999998 66665555432222221111 111 22222 2 4789999763211 1121110
Q ss_pred -----eCCCCCCCeEEEE--ccC-CC-EEEEEeCCCcEEEEEC-------CCCeEeEEeeecCCCCCccceEEECCCCCE
Q 021669 179 -----VGGDISDANVVKF--SND-GR-LMLLTTMEGHIHVLDS-------FRGTLLSTYNVKPVSRNSTLEASFSPEGMF 242 (309)
Q Consensus 179 -----~~~~~~~~~~v~~--s~d-g~-~l~~~~~dg~v~i~d~-------~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 242 (309)
+......+..+|+ +|. ++ ++.....+|.+..|++ .+.+++.++...+ .+-.|...+...+
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs----q~EgcvvDd~~g~ 193 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS----QTEGMAADDEYGR 193 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS----CEEEEEEETTTTE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC----CcceEEEcCCCCe
Confidence 0011134556777 774 54 5667777899998887 3345666776543 3445778888999
Q ss_pred EEEEcCCCcEEEEECC-----CCceEEEee--cCCCCCcEEEE--CCCee--EEEEccceEEEeeecCC
Q 021669 243 VISGSGDGSVYAWSVR-----SGKEVASWM--SFDTEPPVIKW--TPGSL--MFVTGSSELSFWIPDLS 300 (309)
Q Consensus 243 l~s~s~Dg~i~vwd~~-----~~~~~~~~~--~~~~~v~~l~~--~p~~~--~l~s~~~d~~~~~~~~~ 300 (309)
|+.+-+|..|..++.+ +++.+..+. .....+-.|++ .++++ +|++.-.+-.+-+.+..
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9999999777666754 233444331 22345666766 56654 44444334444444544
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.23 E-value=0.14 Score=47.94 Aligned_cols=200 Identities=9% Similarity=-0.012 Sum_probs=107.8
Q ss_pred ceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceE
Q 021669 13 RISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 91 (309)
Q Consensus 13 ~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~ 91 (309)
.+.+|+|++.+. +..+-..++.|..++.+.......+...-.....+++.+.+..++++.. ..+.|.+.++......
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~--~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT--GTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEETTSTTCE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC--CCCEEEEEecCCCcEE
Confidence 466899998654 4566667888888888654333333322234567888877777777643 2578889888654432
Q ss_pred EEeeecccCEEEEEecCC-CCeEEEe-cCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCC
Q 021669 92 RYFKGHHDRVVSLSLCSS-KDCFISG-SLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKY 169 (309)
Q Consensus 92 ~~~~~h~~~v~~v~~~~~-~~~l~s~-s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 169 (309)
..+.......+++++.|. |..++|- +..+.|...++.........
T Consensus 116 ~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~--------------------------------- 162 (628)
T 4a0p_A 116 VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV--------------------------------- 162 (628)
T ss_dssp EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE---------------------------------
T ss_pred EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE---------------------------------
Confidence 223344456788888874 4444443 22344444443322110000
Q ss_pred CcCCceEEEeCCCCCCCeEEEEccCC-CEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcC
Q 021669 170 EKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 248 (309)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~ 248 (309)
......+.+++++++ +++++-...+.|..+|+..... ..+... ......+++.. ++.+.|-..
T Consensus 163 -----------~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~---l~~P~glav~~-~~ly~tD~~ 226 (628)
T 4a0p_A 163 -----------PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD---LPHPFGLTQYQ-DYIYWTDWS 226 (628)
T ss_dssp -----------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC---CSCEEEEEEET-TEEEEEETT
T ss_pred -----------CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc---CCCceEEEEEC-CEEEEecCC
Confidence 001223566777754 3444445566777777643322 222111 11223455543 444455555
Q ss_pred CCcEEEEECCCCceE
Q 021669 249 DGSVYAWSVRSGKEV 263 (309)
Q Consensus 249 Dg~i~vwd~~~~~~~ 263 (309)
.+.|...|..+++..
T Consensus 227 ~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 227 RRSIERANKTSGQNR 241 (628)
T ss_dssp TTEEEEEETTTCCSC
T ss_pred CCEEEEEECCCCCce
Confidence 677777776665543
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.22 E-value=0.087 Score=45.45 Aligned_cols=179 Identities=15% Similarity=0.180 Sum_probs=97.9
Q ss_pred EEEecCCCCeEEEec------------CCCcEEEeeCCCc--eeeeeeeecC--------ce-eEEE-C-CCC--cEEEE
Q 021669 103 SLSLCSSKDCFISGS------------LDRTVLLWDQRAE--KCQGLLRVQG--------RP-AAAY-D-DQG--LVFAV 155 (309)
Q Consensus 103 ~v~~~~~~~~l~s~s------------~Dg~v~~Wd~~~~--~~~~~~~~~~--------~~-~~~~-~-~~~--~~~~~ 155 (309)
.+.+.|+|..+++++ .+|.|.++|+.+. +.. .+...+ .+ ...+ . .++ .++.+
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 444566665555542 6899999998732 222 222211 11 1111 1 123 24433
Q ss_pred EE---CCEEEEEECCCCCcCCceEEEeCCC-CCCCeEEEEccCCCEEEEEeC-----------------CCcEEEEECCC
Q 021669 156 AF---GGYIRMFDARKYEKGPFDIFSVGGD-ISDANVVKFSNDGRLMLLTTM-----------------EGHIHVLDSFR 214 (309)
Q Consensus 156 ~~---~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~v~~s~dg~~l~~~~~-----------------dg~v~i~d~~~ 214 (309)
-. +..|.+|++.........+....+. ....+.+.+.++|+++++... .|.|+-+|..+
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~ 212 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND 212 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe
Confidence 32 3577787765322111112233332 345688999999998887651 25566666532
Q ss_pred CeEeEEeeecCCCCCccceEEECCCCCEEEEE-cCCCcEEEEECCC-Cce--EEEeecCCCCCcEEEECC-CeeEEEEcc
Q 021669 215 GTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRS-GKE--VASWMSFDTEPPVIKWTP-GSLMFVTGS 289 (309)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~-s~Dg~i~vwd~~~-~~~--~~~~~~~~~~v~~l~~~p-~~~~l~s~~ 289 (309)
-+.+. .. -.....++||||+++++.+ +..+.|+.|++.. ++. ...+ ...+.+-.++..+ +|++.+++.
T Consensus 213 ~~~~~--~~----l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 213 VRVVA--EG----FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp CEEEE--EE----ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred EEEee--cC----CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 22211 11 1223468999999887776 5678999999863 332 1223 3344456688888 588777554
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=0.15 Score=46.03 Aligned_cols=237 Identities=11% Similarity=0.112 Sum_probs=130.2
Q ss_pred eEEEEec-CCCEEEEEcCCCCCceeEEEEccCCceEEEeee---cccCEEEEEe-------cCCCCeEEEecCCC-----
Q 021669 57 DLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG---HHDRVVSLSL-------CSSKDCFISGSLDR----- 120 (309)
Q Consensus 57 ~~~~~~~-~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~---h~~~v~~v~~-------~~~~~~l~s~s~Dg----- 120 (309)
..++|.| +...++.+... .+.|++.|++++........ .......++| .+++++|+.+...+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~--~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDG--HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEETTEEEEEEEEEET--EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CEEEEccCCCCEEEEEECC--CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4577777 34455555421 45788999888765443332 2245899999 99998666555443
Q ss_pred --cEEEeeCCC-ceee-----eee-eecCceeEEECC-CCcEEEEE-ECCEEEEEECC-------CCCc--C---C----
Q 021669 121 --TVLLWDQRA-EKCQ-----GLL-RVQGRPAAAYDD-QGLVFAVA-FGGYIRMFDAR-------KYEK--G---P---- 173 (309)
Q Consensus 121 --~v~~Wd~~~-~~~~-----~~~-~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~d~~-------~~~~--~---~---- 173 (309)
.+.+.+... +... ..+ ....-..++.++ .+.++.+. ..+.|..+|+. .... + .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665333 1221 111 111222345566 45555555 45789999986 2221 0 0
Q ss_pred c-eEEEeCCCCCCCeEEEEccCCC-EEEEEeCCCcEEEEEC--CCCeEe--EEeeec-CC-----------CCCccc-eE
Q 021669 174 F-DIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDS--FRGTLL--STYNVK-PV-----------SRNSTL-EA 234 (309)
Q Consensus 174 ~-~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~dg~v~i~d~--~~~~~~--~~~~~~-~~-----------~~~~~~-~~ 234 (309)
+ .++... .......++++|+|+ ++++-.....|+.+|. ..+... ..+... .. .-+... -+
T Consensus 300 ~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 300 FKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp EEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred cceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 1 223332 223457899999999 4666677889998654 333321 111111 00 001122 24
Q ss_pred EEC-------CCCCEEEEEcCCCcEEEEECCCCceEEEeecCC------------------------CCCcEEEECCC-e
Q 021669 235 SFS-------PEGMFVISGSGDGSVYAWSVRSGKEVASWMSFD------------------------TEPPVIKWTPG-S 282 (309)
Q Consensus 235 ~~s-------p~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~------------------------~~v~~l~~~p~-~ 282 (309)
+.. ++|..+++=.....|+.++ .++ .+.++.+.. ..+..|++.++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 443 4567777767788999998 456 355543321 12456999996 7
Q ss_pred eEEEEccceEEEeeec
Q 021669 283 LMFVTGSSELSFWIPD 298 (309)
Q Consensus 283 ~~l~s~~~d~~~~~~~ 298 (309)
.++++-....+++..+
T Consensus 457 ~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 457 MFYVHDQVGHTIRTIS 472 (496)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCEEEEEE
Confidence 7777655554554433
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.10 E-value=0.11 Score=44.63 Aligned_cols=227 Identities=11% Similarity=0.083 Sum_probs=116.7
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCce--eeeee---ccccceeEEEEecC---CCEEEEEcCCCCC---ceeE
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATC--LKTIN---SKKYGVDLVCFTSH---PTTVIYSSKNGWD---ESLR 81 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~~~~s~~g~d---~~i~ 81 (309)
.-..++|.|+|+++++ ..++.|++++ +++. +..+. ........++++|+ +..++.+.....+ ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4568999999986665 4569999998 3432 22221 12334677899987 5555554321111 5677
Q ss_pred EEEccCCc-----eE-EEee---ecccCEEEEEecCCCCeEEEecC-------------CCcEEEeeCCCc---------
Q 021669 82 LLSLHDNK-----YL-RYFK---GHHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAE--------- 130 (309)
Q Consensus 82 ~~d~~~~~-----~~-~~~~---~h~~~v~~v~~~~~~~~l~s~s~-------------Dg~v~~Wd~~~~--------- 130 (309)
.+++..++ .+ ..+. +.......+.|.|||+..++-+. .+.|.-.|....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 77776432 11 1122 11112368999999987776532 255666665421
Q ss_pred ---eeeeeeeecC--ceeEEECC-CCcEEEEEEC-CE--------EEEEECCC-CC---------cC--CceEEEeCCCC
Q 021669 131 ---KCQGLLRVQG--RPAAAYDD-QGLVFAVAFG-GY--------IRMFDARK-YE---------KG--PFDIFSVGGDI 183 (309)
Q Consensus 131 ---~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~-~~--------i~~~d~~~-~~---------~~--~~~~~~~~~~~ 183 (309)
.....+.... -...++++ .+.++.+-.+ +. |.+...-. +- .. ......... .
T Consensus 189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~-~ 267 (352)
T 2ism_A 189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQ-G 267 (352)
T ss_dssp CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT-C
T ss_pred CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCC-C
Confidence 0011111111 12345666 5666665543 22 33332111 00 00 001111111 1
Q ss_pred CCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe----E--eEEeeecCCCCCccceEEECCCCCEEEEEc
Q 021669 184 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT----L--LSTYNVKPVSRNSTLEASFSPEGMFVISGS 247 (309)
Q Consensus 184 ~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~----~--~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s 247 (309)
.....++| .+|.++++....+.|...++.... . ...+. . ....+..+++.|||..+++..
T Consensus 268 ~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~-~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 268 FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL--S-GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--E-SSCCEEEEEECTTSCEEEEEC
T ss_pred CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec--c-cCCCeeEEEECCCCcEEEEEe
Confidence 22345667 578888777777888887765322 1 11221 1 124567899999997766653
No 299
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.07 E-value=0.12 Score=44.43 Aligned_cols=231 Identities=12% Similarity=0.111 Sum_probs=117.0
Q ss_pred ceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCcee---eee----eccccceeEEEEecC---CCEEEEEcCC-CC----
Q 021669 13 RISSMDFHKSSS-YLVTASDDESIRLYDVTAATCL---KTI----NSKKYGVDLVCFTSH---PTTVIYSSKN-GW---- 76 (309)
Q Consensus 13 ~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~~~~~s~~-g~---- 76 (309)
.-..|+|.|+|+ ++++ ...+.|++++.+ +... ..+ .........++++|+ ...++.+... +.
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999998 6654 467999999854 3321 111 112234567899885 4555544211 11
Q ss_pred CceeEEEEccCCc----eEE-Eeeec------ccCEEEEEecCCCCeEEEecC-------------CCcEEEeeCCCce-
Q 021669 77 DESLRLLSLHDNK----YLR-YFKGH------HDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK- 131 (309)
Q Consensus 77 d~~i~~~d~~~~~----~~~-~~~~h------~~~v~~v~~~~~~~~l~s~s~-------------Dg~v~~Wd~~~~~- 131 (309)
...|..+++..+. ..+ .+.+- ......+.|.|||.+.++-+. .|.|.-.|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 1245556654321 111 12111 112357999999976666543 2456666654320
Q ss_pred -----------eeeeeeecC--ceeEEECC-CCcEEEEEECC----EEEEEECC-CC-----C-----------------
Q 021669 132 -----------CQGLLRVQG--RPAAAYDD-QGLVFAVAFGG----YIRMFDAR-KY-----E----------------- 170 (309)
Q Consensus 132 -----------~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~----~i~~~d~~-~~-----~----------------- 170 (309)
....+.... -..+++++ .+.++++-.+. .|.+...- ++ .
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 111111111 12345666 56666655431 33222110 00 0
Q ss_pred cC--CceEEEeCCCCCCCeEEEEcc-------CCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCC
Q 021669 171 KG--PFDIFSVGGDISDANVVKFSN-------DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 241 (309)
Q Consensus 171 ~~--~~~~~~~~~~~~~~~~v~~s~-------dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~ 241 (309)
.. ....+....+ .....++|.+ +|.++++.-..+.|..+++..+...............+..+++.|||.
T Consensus 257 ~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 257 VAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 00 0001111111 1234566643 578888887888888888776554433222111224677899999998
Q ss_pred EEEEE
Q 021669 242 FVISG 246 (309)
Q Consensus 242 ~l~s~ 246 (309)
.+++.
T Consensus 336 lyv~t 340 (353)
T 2g8s_A 336 LYVLT 340 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66653
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.95 E-value=0.25 Score=46.07 Aligned_cols=225 Identities=12% Similarity=0.089 Sum_probs=122.2
Q ss_pred CCCcEEEEEcCCCc-eeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce-EEEeeecccCEEEEEecC
Q 021669 31 DDESIRLYDVTAAT-CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCS 108 (309)
Q Consensus 31 ~D~~v~iWd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~-~~~~~~h~~~v~~v~~~~ 108 (309)
....|+.-|+.... ....+...-.....+++.+....++++... .+.|..+++..... ...+..-.....++++.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~--~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 93 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETT--TTEEEEEEC-----CEEEECSSCSCEEEEEEET
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECC--CCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe
Confidence 35678888876542 111111122235678888888888887532 56788888876532 223333335688999988
Q ss_pred C-CCeEEEecCCCcEEEeeCCCceeeeeee--ecCceeEEECCC-CcEEEEEEC--CEEEEEECCCCCcCCceEEEeCCC
Q 021669 109 S-KDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQ-GLVFAVAFG--GYIRMFDARKYEKGPFDIFSVGGD 182 (309)
Q Consensus 109 ~-~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~ 182 (309)
. ++..++-...+.|.+-++........+. ...-...++++. +.++-+..+ ..|...++.... ........
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~----~~~l~~~~ 169 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS----RFIIINSE 169 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS----CEEEECSS
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc----eEEEEeCC
Confidence 5 4466666778899999976543322221 111123455554 444444432 456655553211 11111122
Q ss_pred CCCCeEEEEccC-CCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEECCCCc
Q 021669 183 ISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 183 ~~~~~~v~~s~d-g~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~ 261 (309)
....+.++++++ ++++++-...+.|..+|............ .......+++.++ +.+.+-...+.|...|..+++
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~---~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG---SLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeC---CCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 345688999986 45555656678899998864333222111 1122346777666 555555677899999988776
Q ss_pred eEEE
Q 021669 262 EVAS 265 (309)
Q Consensus 262 ~~~~ 265 (309)
....
T Consensus 246 ~~~~ 249 (619)
T 3s94_A 246 GLRE 249 (619)
T ss_dssp CCEE
T ss_pred ccEE
Confidence 5443
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.94 E-value=0.16 Score=43.72 Aligned_cols=207 Identities=12% Similarity=0.255 Sum_probs=106.4
Q ss_pred eEEEEeCCCCCEEEEee------------CCCcEEEEEcCC--Cceeeeee--c-----cccceeEEEEec--CCC-EEE
Q 021669 14 ISSMDFHKSSSYLVTAS------------DDESIRLYDVTA--ATCLKTIN--S-----KKYGVDLVCFTS--HPT-TVI 69 (309)
Q Consensus 14 V~~i~~s~~~~~l~t~s------------~D~~v~iWd~~~--~~~~~~~~--~-----~~~~v~~~~~~~--~~~-~~~ 69 (309)
.-.|...|+|..+++++ .+|.|-++|..+ ++. +.+. + .......+.+.+ +++ +++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 44667788876665552 689999999873 222 2222 1 123345566655 344 455
Q ss_pred EEcCCCCCceeEEEEccCCc-e---EEEeeec-ccCEEEEEecCCCCeEEEecC---CCcEEEeeCCCceeeeeeeecCc
Q 021669 70 YSSKNGWDESLRLLSLHDNK-Y---LRYFKGH-HDRVVSLSLCSSKDCFISGSL---DRTVLLWDQRAEKCQGLLRVQGR 141 (309)
Q Consensus 70 ~~s~~g~d~~i~~~d~~~~~-~---~~~~~~h-~~~v~~v~~~~~~~~l~s~s~---Dg~v~~Wd~~~~~~~~~~~~~~~ 141 (309)
.+.....+.++.+|++..+. . +..+.+. -...+.+.+.++|++.++... |.....|+. + ...
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~--------~--~~~ 200 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEM--------H--LGL 200 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHH--------H--TTC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchh--------h--ccC
Confidence 55433336788898876532 2 2333332 245788888888876666531 110001100 0 000
Q ss_pred eeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEE-EeCCCcEEEEECCC-CeEeE
Q 021669 142 PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFR-GTLLS 219 (309)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~-~~~dg~v~i~d~~~-~~~~~ 219 (309)
+. +.+..+|.. ...... ....-.+.+++|||++.+.. -+..++|+.||... +++..
T Consensus 201 ------~~---------g~vyr~d~~-----~~~~~~--~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~ 258 (355)
T 3sre_A 201 ------AW---------SFVTYYSPN-----DVRVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP 258 (355)
T ss_dssp ------CC---------EEEEEECTT-----CCEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred ------Cc---------cEEEEEECC-----eEEEee--cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec
Confidence 00 111111110 000000 01123478999999976554 55678999999753 33322
Q ss_pred --EeeecCCCCCccceEEECC-CCCEEEEEcCCC-cEEEEEC
Q 021669 220 --TYNVKPVSRNSTLEASFSP-EGMFVISGSGDG-SVYAWSV 257 (309)
Q Consensus 220 --~~~~~~~~~~~~~~~~~sp-~g~~l~s~s~Dg-~i~vwd~ 257 (309)
.+.. ....-.+++.+ +|+..+++..++ .|..|+.
T Consensus 259 ~~~~~~----~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 259 LRVLSF----DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEEC----SSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred CEEEeC----CCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 2221 23344678888 599888776443 4444443
No 302
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.93 E-value=0.17 Score=43.64 Aligned_cols=234 Identities=12% Similarity=0.106 Sum_probs=121.5
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCc-eeeeee---ccccceeEEEEecC---CCEEEEEcCC-CCC----ce
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-CLKTIN---SKKYGVDLVCFTSH---PTTVIYSSKN-GWD----ES 79 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~~~~s~~-g~d----~~ 79 (309)
..-..++|.|+|+++++ ..++.|+++| .+++ .+..+. ........++++|+ +..++++... ..+ ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34568999999986655 4569999887 3454 222211 12234677899887 5555544321 112 46
Q ss_pred eEEEEccCC--c---e--E-EEeee-cccCEEEEEecCCCCeEEEecC-------------CCcEEEeeCCCce------
Q 021669 80 LRLLSLHDN--K---Y--L-RYFKG-HHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK------ 131 (309)
Q Consensus 80 i~~~d~~~~--~---~--~-~~~~~-h~~~v~~v~~~~~~~~l~s~s~-------------Dg~v~~Wd~~~~~------ 131 (309)
|..++...+ . . + ..+.. .......+.|.|||++.++-+. .|.|.-.+....-
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777776544 1 1 1 11211 1112457899999987777542 2455555543210
Q ss_pred -eeeeeee--cCceeEEECC-CCcEEEEEEC----CEEEEEECCC-C-------C--cC--CceEEEeCCCCCCCeEEEE
Q 021669 132 -CQGLLRV--QGRPAAAYDD-QGLVFAVAFG----GYIRMFDARK-Y-------E--KG--PFDIFSVGGDISDANVVKF 191 (309)
Q Consensus 132 -~~~~~~~--~~~~~~~~~~-~~~~~~~~~~----~~i~~~d~~~-~-------~--~~--~~~~~~~~~~~~~~~~v~~ 191 (309)
....+.. ..-..+++++ .+.++.+-.+ ..|.+...-. + . .. ................++|
T Consensus 187 ~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~ 266 (354)
T 3a9g_A 187 PNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASF 266 (354)
T ss_dssp TTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEE
T ss_pred CCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEE
Confidence 0011111 1122456666 5666655432 2344433211 0 0 00 0011222111123456777
Q ss_pred -------ccCCCEEEEEeCCCcEEEEECCCC-eEeEEeeecCCCCCccceEEECCCCCEEEEEc
Q 021669 192 -------SNDGRLMLLTTMEGHIHVLDSFRG-TLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 247 (309)
Q Consensus 192 -------s~dg~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s 247 (309)
..+|.++++....+.|..+++... ...............+..+++.|||..+++..
T Consensus 267 y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 267 VHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 367888888878888988887642 33221111111234677899999997776664
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.87 E-value=0.35 Score=46.45 Aligned_cols=181 Identities=11% Similarity=0.000 Sum_probs=95.0
Q ss_pred CCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCC----ceEEEeeecccCEEEEEe
Q 021669 31 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFKGHHDRVVSLSL 106 (309)
Q Consensus 31 ~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~----~~~~~~~~h~~~v~~v~~ 106 (309)
....|+..++........+... ..+..+++.+....++++... .+.|+.+++... .....+........+|++
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~-~~~~gl~~d~~~~~lY~sD~~--~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSC-SSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred cccceeEeeccCCcceeeecCC-CceEEEeecccCCeeEEeecc--ceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 4467888887755443333332 335677888777777776532 567888887652 223333323345566776
Q ss_pred cCCC-CeEEEecCCCcEEEeeCCCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCC
Q 021669 107 CSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 185 (309)
Q Consensus 107 ~~~~-~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 185 (309)
.+.+ ++.++-...+.|.+.++........+ ......
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~-------------------------------------------~~~l~~ 515 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-------------------------------------------RENGSK 515 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEE-------------------------------------------ECTTCC
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEE-------------------------------------------eCCCCC
Confidence 6544 34455555666666665432211000 001122
Q ss_pred CeEEEEccC-CCEEEEEeCC-CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEE-cCCCcEEEEECCCC
Q 021669 186 ANVVKFSND-GRLMLLTTME-GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRSG 260 (309)
Q Consensus 186 ~~~v~~s~d-g~~l~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~-s~Dg~i~vwd~~~~ 260 (309)
...|+++|. |.++++-..+ +.|...++.... ...+.. ..-.....+++.|.++.|+.+ .....|...++...
T Consensus 516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEEe--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 456777775 4444444333 677777765332 222211 111334568888766655555 45567888888543
No 304
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.62 E-value=0.26 Score=41.68 Aligned_cols=196 Identities=6% Similarity=-0.084 Sum_probs=109.0
Q ss_pred CceeEEEEccCCc--eEEEeeecccCEEEEEecCC-CCeEEEecCCCcEEEeeCCCceeee-eeee--cCceeEEECC-C
Q 021669 77 DESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQG-LLRV--QGRPAAAYDD-Q 149 (309)
Q Consensus 77 d~~i~~~d~~~~~--~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~Dg~v~~Wd~~~~~~~~-~~~~--~~~~~~~~~~-~ 149 (309)
...|+..|+.... ....+. ....+.+++|.+. ++.+++-...+.|..+++....... .+.. ..-...+++. .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4578999987753 222232 2345678999874 5566777778899999987653211 1111 1122345553 3
Q ss_pred CcEEEEE-ECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC-CEEEEEe-CCCcEEEEECCCCeEeEEeeecCC
Q 021669 150 GLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPV 226 (309)
Q Consensus 150 ~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~ 226 (309)
+.++.+. ..+.|.++++.... ..............+++.|.+ .++.+-. ..+.|..+++.. .....+...
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~----~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~-- 163 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSL----RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINS-- 163 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCS----CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECS--
T ss_pred CeEEEEECCCCEEEEEECCCCc----EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEEC--
Confidence 3333333 35788888865321 111122233456789999865 4444442 367898888753 322222111
Q ss_pred CCCccceEEECCCCCEEEEE-cCCCcEEEEECCCCceEEEeec-CCCCCcEEEECCC
Q 021669 227 SRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRSGKEVASWMS-FDTEPPVIKWTPG 281 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~-s~Dg~i~vwd~~~~~~~~~~~~-~~~~v~~l~~~p~ 281 (309)
.-.....++++|+++.|+-+ +..+.|..+|+.... ...+.. .-..+..+++..+
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~~ 219 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFED 219 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEEEEEETT
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceEEEEeCC
Confidence 11234579999976666555 667899999986432 222221 2233455665433
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.56 E-value=0.33 Score=42.69 Aligned_cols=103 Identities=13% Similarity=0.170 Sum_probs=66.7
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCceeeeeecc---cc-ceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc--------
Q 021669 22 SSSYLVTASDDESIRLYDVTAATCLKTINSK---KY-GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK-------- 89 (309)
Q Consensus 22 ~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~---~~-~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~-------- 89 (309)
+|..++.+ .++.||.=++.....-+.+... .. .+..+..+|+|+.++... +.+|.+..+-.+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC----SSEEEEEECCTTCSCCCCHHH
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec----CCeEEEEEecCccccCccccc
Confidence 44444444 3566666666543334444433 23 467789999999888764 5688888875221
Q ss_pred ----eEEEeee------cccCEEEEEecCC---CCeEEEecCCCcEEEeeCCC
Q 021669 90 ----YLRYFKG------HHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRA 129 (309)
Q Consensus 90 ----~~~~~~~------h~~~v~~v~~~~~---~~~l~s~s~Dg~v~~Wd~~~ 129 (309)
..+.+.- ...+|..+.|+|- +..|++-..|++||+||+..
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1223321 2567999999984 45788888899999999865
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.53 E-value=0.045 Score=47.18 Aligned_cols=103 Identities=16% Similarity=0.205 Sum_probs=62.3
Q ss_pred CCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeec--CCCCCccceEEECCC---CCEEEEE-cCC-----CcE
Q 021669 184 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK--PVSRNSTLEASFSPE---GMFVISG-SGD-----GSV 252 (309)
Q Consensus 184 ~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~sp~---g~~l~s~-s~D-----g~i 252 (309)
.....+++.|||+++++- .+|.|++++ .++........ .........++|+|+ +++|+.+ ... ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 345789999999976664 569999998 44422111111 111234567999998 5555544 322 678
Q ss_pred EEEECCCCc-----eE-EEeec---CCCCCcEEEECCCeeEEEEcc
Q 021669 253 YAWSVRSGK-----EV-ASWMS---FDTEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 253 ~vwd~~~~~-----~~-~~~~~---~~~~v~~l~~~p~~~~l~s~~ 289 (309)
..|+....+ .+ ..+.. .......++|.|||.+.++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 888886432 11 22331 112346899999998887753
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.49 E-value=0.29 Score=40.62 Aligned_cols=228 Identities=10% Similarity=0.127 Sum_probs=108.6
Q ss_pred CCCEEEEee-CC-----CcEEEEEcCCCceee--eeeccccceeEEEEecCCCEEEEEcCCC--CCceeEEEEccCCc--
Q 021669 22 SSSYLVTAS-DD-----ESIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNK-- 89 (309)
Q Consensus 22 ~~~~l~t~s-~D-----~~v~iWd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~s~~g--~d~~i~~~d~~~~~-- 89 (309)
++.+++.|+ .+ ..+.+||..+++-.. .+..... ...+...++..++.+...+ .-..+.+||+.+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRR--YVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCB--SCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhc--cccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 456777777 33 377888987654222 1111111 1112223343334332211 12468889987765
Q ss_pred -eEEEeeecc--cCEEEEEecCCCCeEEEecCCC-----cEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEEEEEC
Q 021669 90 -YLRYFKGHH--DRVVSLSLCSSKDCFISGSLDR-----TVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAFG 158 (309)
Q Consensus 90 -~~~~~~~h~--~~v~~v~~~~~~~~l~s~s~Dg-----~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 158 (309)
-...-.-.. ..-..+. .+++.++.|+.++ .+.++|+.+.+....-.++. ...........++.++.+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCC
Confidence 222111111 1111122 2567777777543 57788887766443222211 111222222233333332
Q ss_pred -----CEEEEEECCCCCcCCceEEE-eCCCCCCCeEEEEccCCCEEEEEeCC-----CcEEEEECCCCeEeEEeeecCCC
Q 021669 159 -----GYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 159 -----~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~v~~s~dg~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
..+..||+...+ ..... .........++ .-++++++.|+.+ ..+.+||+.+.+-...... +..
T Consensus 170 ~~~~~~~~~~~d~~~~~---W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~ 243 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGH---WTNVTPMATKRSGAGVA--LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTP 243 (301)
T ss_dssp SSCBCCCEEEEETTTTE---EEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSC
T ss_pred CCcccceEEEEeCCCCc---EEeCCCCCcccccceEE--EECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCc
Confidence 457778865421 11110 00011111222 2367888888764 4688999987764432211 111
Q ss_pred CCccceEEECCCCCEEEEEcCC-----CcEEEEECCCCc
Q 021669 228 RNSTLEASFSPEGMFVISGSGD-----GSVYAWSVRSGK 261 (309)
Q Consensus 228 ~~~~~~~~~sp~g~~l~s~s~D-----g~i~vwd~~~~~ 261 (309)
.....+..-+++.++.|+.+ ..+.+||..+.+
T Consensus 244 --r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 244 --RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp --CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred --ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 11111222377788888766 367889987654
No 308
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.38 E-value=0.41 Score=41.09 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=29.2
Q ss_pred EeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCce
Q 021669 93 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 131 (309)
Q Consensus 93 ~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~ 131 (309)
.+..-....+.++|.||++.+++--..|.|++++...++
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 344445677899999999988887668999988755443
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.33 E-value=0.38 Score=42.94 Aligned_cols=33 Identities=6% Similarity=0.111 Sum_probs=23.8
Q ss_pred ccCEEEEEecCCCCeEEEecCCCcEEEeeCCCc
Q 021669 98 HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE 130 (309)
Q Consensus 98 ~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~ 130 (309)
....++++|.|+|+.+++-...+.|++++..++
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCC
Confidence 346789999999998887654456887765433
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.28 E-value=0.44 Score=40.45 Aligned_cols=228 Identities=15% Similarity=0.254 Sum_probs=130.4
Q ss_pred EeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC-CceEEEeee
Q 021669 18 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKG 96 (309)
Q Consensus 18 ~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~-~~~~~~~~~ 96 (309)
-.+|..+.+|--+ .+++.|+|+++.+.++...-.+ .|.--.|-. .+.+.... +..|.-|+++. .++++.+..
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis-~~~L~lVT----~taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWIS-LNTVALVT----DNAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECS-SSEEEEEE----SSEEEEEESSTTCCCEEEEEC
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecC-CCeEEEEc----CCcEEEEcccCCCCCceeeec
Confidence 3478888887765 6899999999888777665533 343344433 33444433 56899999975 467888887
Q ss_pred ccc----CEEEEEecCCCCeEEEec-------CCCcEEEeeCCCceeeeeeeecCceeE--EEC-----CCCcEEEEEE-
Q 021669 97 HHD----RVVSLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPAA--AYD-----DQGLVFAVAF- 157 (309)
Q Consensus 97 h~~----~v~~v~~~~~~~~l~s~s-------~Dg~v~~Wd~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~- 157 (309)
|.. .|..-..+++.++++-.+ -.|.+.++..+.+.... + .++... .+. .+..+++-+.
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-i--eGhaa~F~~~~~~g~~~~~~lf~fa~r 222 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-I--EGHAASFAQFKMEGNAEESTLFCFAVR 222 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE-E--CCSEEEEEEECCTTCSSCEEEEEEEEE
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce-e--eeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 754 355556677888655333 23667788766543221 1 122211 111 1223444443
Q ss_pred ---CCEEEEEECCCC--CcCCceEEEeC--CC----CCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC
Q 021669 158 ---GGYIRMFDARKY--EKGPFDIFSVG--GD----ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 226 (309)
Q Consensus 158 ---~~~i~~~d~~~~--~~~~~~~~~~~--~~----~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~ 226 (309)
++++++.++... ..+++...... -. ..=..++.+|+.-..+..-+.-|.+++||+.++.++.....
T Consensus 223 ~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI--- 299 (365)
T 2xzh_A 223 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI--- 299 (365)
T ss_dssp ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---
T ss_pred cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc---
Confidence 268999998543 12233211111 00 11113456777777788888899999999999999876543
Q ss_pred CCCccceEEECCCCCEEEEEcCCCcEEEEECC
Q 021669 227 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 258 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~ 258 (309)
....+...+-+.+..=++.....|.|.--.+.
T Consensus 300 S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 300 SGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred CCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 22333333333333334444455554444443
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.18 E-value=0.82 Score=42.58 Aligned_cols=119 Identities=5% Similarity=-0.036 Sum_probs=75.6
Q ss_pred cceEEEEeCCCC-CEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCce
Q 021669 12 GRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 90 (309)
Q Consensus 12 ~~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~ 90 (309)
.....+++++.+ ++..+-...+.|.+.+.+.......+...-.....+++.|....++++.. +....|...++.....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~-g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDW-GEVPKIERAGMDGSSR 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEEC-SSSCEEEEEETTSCSC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEecc-CCCCEEEEEECCCCce
Confidence 457789999854 45666667789999998754332222222234567889888777877753 2245677777765433
Q ss_pred EEEeeecccCEEEEEecCCCC-eEEEecCCCcEEEeeCCCce
Q 021669 91 LRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEK 131 (309)
Q Consensus 91 ~~~~~~h~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~~~~~ 131 (309)
.......-...+++++.++++ ..++=...+.|...|+....
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~ 204 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 204 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc
Confidence 333333445678999998655 44555667788888876543
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.12 E-value=0.11 Score=44.83 Aligned_cols=104 Identities=15% Similarity=0.266 Sum_probs=61.6
Q ss_pred CCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe-EeEEeeecCCCCCccceEEECCC---CCEEEEEcC----C----Cc
Q 021669 184 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT-LLSTYNVKPVSRNSTLEASFSPE---GMFVISGSG----D----GS 251 (309)
Q Consensus 184 ~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~sp~---g~~l~s~s~----D----g~ 251 (309)
.....+++.|||+++++- .+|.|+++|. .+. .+..+............++|+|+ +.+|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~e-~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTE-RPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEEE-TTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEEe-CCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 445788999999966654 5599999973 454 11111111111234567999998 555544432 3 56
Q ss_pred EEEEECCCC--c-----eE-EEeecC-CCCCcEEEECCCeeEEEEcc
Q 021669 252 VYAWSVRSG--K-----EV-ASWMSF-DTEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 252 i~vwd~~~~--~-----~~-~~~~~~-~~~v~~l~~~p~~~~l~s~~ 289 (309)
|..|+.... . .+ ..+... ......|+|.|||.++++.+
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 888887654 1 11 122211 11346799999999888754
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.07 E-value=0.55 Score=40.29 Aligned_cols=29 Identities=14% Similarity=0.225 Sum_probs=22.1
Q ss_pred ccCEEEEEecCCCC-eEEEecCCCcEEEeeC
Q 021669 98 HDRVVSLSLCSSKD-CFISGSLDRTVLLWDQ 127 (309)
Q Consensus 98 ~~~v~~v~~~~~~~-~l~s~s~Dg~v~~Wd~ 127 (309)
....+.++|.|+++ .+++- ..|.|++++.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e-~~G~i~~~~~ 46 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITL-RGGELRHWQA 46 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEE-TTTEEEEEET
T ss_pred CCCcEEEEEcCCCCEEEEEe-CCceEEEEeC
Confidence 34578999999998 66554 5788888874
No 314
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.01 E-value=0.61 Score=39.59 Aligned_cols=216 Identities=9% Similarity=0.046 Sum_probs=118.4
Q ss_pred ecCCCcceEEEEeCCCC-CEEEEeeCCCcEEEEEcCCCceeee-eec----c--ccceeEEEE---ecCCCEEEEEcCC-
Q 021669 7 FRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKT-INS----K--KYGVDLVCF---TSHPTTVIYSSKN- 74 (309)
Q Consensus 7 ~~~h~~~V~~i~~s~~~-~~l~t~s~D~~v~iWd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~~~~~s~~- 74 (309)
+.+.+---.+++|++.. .++++.-..++|..||...+..... +.. . ...+..+.+ .+++..++++ ..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~-~~~ 86 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM-KNA 86 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE-EET
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEE-ccc
Confidence 33444445578998754 4455555899999999976543322 322 1 112456677 4554333322 21
Q ss_pred ------C----CCceeEEEEcc---CCceEEEee--ecc-----------cCEEEEEecCCCCeEEEecCC-CcEEEeeC
Q 021669 75 ------G----WDESLRLLSLH---DNKYLRYFK--GHH-----------DRVVSLSLCSSKDCFISGSLD-RTVLLWDQ 127 (309)
Q Consensus 75 ------g----~d~~i~~~d~~---~~~~~~~~~--~h~-----------~~v~~v~~~~~~~~l~s~s~D-g~v~~Wd~ 127 (309)
| -+..+..+|+. +++.+.... ... .....++..++|+.-++++.- +.|...+.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 0 15678889998 777655443 222 247788888999888887766 55554443
Q ss_pred CCceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcE
Q 021669 128 RAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 207 (309)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v 207 (309)
... .+..|.+.... .......+.+++.|+|+.|++....|.+
T Consensus 167 dG~-----------------------------~~~~~~~~~~~---------~~~~~G~nGIv~~pdg~~Liv~~~~g~L 208 (334)
T 2p9w_A 167 DGK-----------------------------TVSTFAWESGN---------GGQRPGYSGITFDPHSNKLIAFGGPRAL 208 (334)
T ss_dssp TSC-----------------------------CEEEEEECCCC---------SSSCCSCSEEEEETTTTEEEEESSSSSE
T ss_pred CCC-----------------------------EEeeeeecCCC---------cccccCcceEEEeCCCCEEEEEcCCCeE
Confidence 211 11222221100 0011235788999999998888779999
Q ss_pred EEEECCCCeE--eEEee-ecCCCCCccceE-EECCCCCE-EEEEcCCCcEEEEECCCCc
Q 021669 208 HVLDSFRGTL--LSTYN-VKPVSRNSTLEA-SFSPEGMF-VISGSGDGSVYAWSVRSGK 261 (309)
Q Consensus 208 ~i~d~~~~~~--~~~~~-~~~~~~~~~~~~-~~sp~g~~-l~s~s~Dg~i~vwd~~~~~ 261 (309)
..+|+.+... +..-. .........-.+ .---+|+. +++.+..+.+.+.+...++
T Consensus 209 ~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~ 267 (334)
T 2p9w_A 209 TAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWK 267 (334)
T ss_dssp EEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTS
T ss_pred EEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCcc
Confidence 9999874322 11100 000000111111 21236766 5555666766666665543
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.81 E-value=0.66 Score=38.43 Aligned_cols=228 Identities=12% Similarity=0.150 Sum_probs=106.0
Q ss_pred CCEEEEeeCC----CcEEEEEcCCCceeee--eeccccceeEEEEecCCCEEEEEcCCC--CCceeEEEEccCCceEEEe
Q 021669 23 SSYLVTASDD----ESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNKYLRYF 94 (309)
Q Consensus 23 ~~~l~t~s~D----~~v~iWd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~s~~g--~d~~i~~~d~~~~~~~~~~ 94 (309)
+.+++.|+.+ ..+..||..+.+-... +....... .++ ..++..++.+...+ .-..+.+||..+++-...-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4566677654 3678888876542221 11111111 112 22333333332111 1245778888776522211
Q ss_pred eecccCE-EEEEecCCCCeEEEecCCC-----cEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEEEEE-------C
Q 021669 95 KGHHDRV-VSLSLCSSKDCFISGSLDR-----TVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAF-------G 158 (309)
Q Consensus 95 ~~h~~~v-~~v~~~~~~~~l~s~s~Dg-----~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-------~ 158 (309)
.-...+- .++.. -+++.++.|+.++ .+.++|+.+.+....-.++. ....+......++.++. -
T Consensus 94 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 94 NMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp CCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEEC
T ss_pred CCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccc
Confidence 1011110 11111 2567777777654 57788887776543322211 11122222222333332 1
Q ss_pred CEEEEEECCCCCcCCceEE-EeCCCCCCCeEEEEccCCCEEEEEeCC-----CcEEEEECCCCeEeEEeeecCCCCCccc
Q 021669 159 GYIRMFDARKYEKGPFDIF-SVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTL 232 (309)
Q Consensus 159 ~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~v~~s~dg~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~ 232 (309)
..+..||+...+ .... ...........+ .-++++++.|+.+ ..+.+||+.+.+-...... +..... .
T Consensus 173 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~-~ 245 (302)
T 2xn4_A 173 STVECYNATTNE---WTYIAEMSTRRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM-NMCRRN-A 245 (302)
T ss_dssp CCEEEEETTTTE---EEEECCCSSCCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC-SSCCBS-C
T ss_pred cEEEEEeCCCCc---EEECCCCccccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC-CCcccc-C
Confidence 347777765421 1110 000011111222 2367888888765 3688999887654432211 111111 1
Q ss_pred eEEECCCCCEEEEEcCCC-----cEEEEECCCCc
Q 021669 233 EASFSPEGMFVISGSGDG-----SVYAWSVRSGK 261 (309)
Q Consensus 233 ~~~~sp~g~~l~s~s~Dg-----~i~vwd~~~~~ 261 (309)
. +...+++.++.|+.++ .+.+||..+.+
T Consensus 246 ~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 246 G-VCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp E-EEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred e-EEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 1 2223778888888664 48999998754
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.71 E-value=0.74 Score=38.23 Aligned_cols=229 Identities=8% Similarity=0.044 Sum_probs=107.8
Q ss_pred CCEEEEeeC--CCcEEEEEcCCCceee--eeeccccceeEEEEecCCCEEEEEcCC-CCCceeEEEEccCCceEEEeeec
Q 021669 23 SSYLVTASD--DESIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKN-GWDESLRLLSLHDNKYLRYFKGH 97 (309)
Q Consensus 23 ~~~l~t~s~--D~~v~iWd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~s~~-g~d~~i~~~d~~~~~~~~~~~~h 97 (309)
+.+++.|+. ...+.+||..+++-.. .+........ +...++..++.+... ..-..+.+||+.+++-...-.-.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~--~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAA--CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCE--EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeE--EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345666665 3578888987754322 1111111111 122234333333211 11256788898877532221111
Q ss_pred ccCEEEEEecCCCCeEEEecCC------CcEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEEEEE---------CC
Q 021669 98 HDRVVSLSLCSSKDCFISGSLD------RTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAF---------GG 159 (309)
Q Consensus 98 ~~~v~~v~~~~~~~~l~s~s~D------g~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~ 159 (309)
..+.......-+++.++.|+.+ ..+.++|+.+.+....-.++. ....+......++.++. -.
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 1111111112266777888766 468888988776443222211 11122222223333332 23
Q ss_pred EEEEEECCCCCcCCceEEE-eCCCCCCCeEEEEccCCCEEEEEeCC-----CcEEEEECCCCeEeEEeeecCCCCCccce
Q 021669 160 YIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLE 233 (309)
Q Consensus 160 ~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~v~~s~dg~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
.+..||+.... ..... ..........+. -++++++.|+.+ ..+.+||+.+.+-...-. .+........
T Consensus 170 ~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~ 243 (306)
T 3ii7_A 170 SCEVYDPATET---WTELCPMIEARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP-MPWKGVTVKC 243 (306)
T ss_dssp CEEEEETTTTE---EEEECCCSSCCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCC-CSCCBSCCEE
T ss_pred eEEEeCCCCCe---EEECCCccchhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC-CCCCccceeE
Confidence 46777765421 11110 000111112222 267888887754 357889988765432211 1111111112
Q ss_pred EEECCCCCEEEEEcCC-----CcEEEEECCCCc
Q 021669 234 ASFSPEGMFVISGSGD-----GSVYAWSVRSGK 261 (309)
Q Consensus 234 ~~~sp~g~~l~s~s~D-----g~i~vwd~~~~~ 261 (309)
+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 223 77888888855 468999998754
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.70 E-value=0.76 Score=38.30 Aligned_cols=229 Identities=12% Similarity=0.102 Sum_probs=106.7
Q ss_pred CCCCEEEEeeCC----CcEEEEEcCCCceeee--eeccccceeEEEEecCCCEEEEEcC----C--CCCceeEEEEccCC
Q 021669 21 KSSSYLVTASDD----ESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSK----N--GWDESLRLLSLHDN 88 (309)
Q Consensus 21 ~~~~~l~t~s~D----~~v~iWd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~s~----~--g~d~~i~~~d~~~~ 88 (309)
-++.+++-||.+ ..+.+||..+++-... +....... .++ ..++..++.+.. . ..-..+.+||+.++
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 356777777742 3678889876543221 11111111 112 223333333221 0 01245778888776
Q ss_pred ceEEE--eeecccCEEEEEecCCCCeEEEecCC-----CcEEEeeCCCceeeeeeeec----CceeEEECCCCcEEEEEE
Q 021669 89 KYLRY--FKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAF 157 (309)
Q Consensus 89 ~~~~~--~~~h~~~v~~v~~~~~~~~l~s~s~D-----g~v~~Wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 157 (309)
+-... +......-..+. -+++.++.|+.+ ..+.++|+.+.+....-.++ ....... ....++.++.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 177 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGF 177 (308)
T ss_dssp EEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred eEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCC
Confidence 42211 111111111122 256777777654 36778888777644332221 1112222 2223333333
Q ss_pred C-----CEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC-----CcEEEEECCCCeEeEEeeecCCC
Q 021669 158 G-----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVS 227 (309)
Q Consensus 158 ~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~ 227 (309)
+ +.+..||+...+=.. +...........++.+ ++++++.|+.+ ..+.+||+.+.+-..... .+..
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~--~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~ 252 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRM--ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP-MKHR 252 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEE--CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC-CSSC
T ss_pred CCCCcCceEEEEeCCCCeEee--CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC-CCCC
Confidence 2 457778765421000 0000001111222223 77888888765 468899988765433211 1111
Q ss_pred CCccceEEECCCCCEEEEEcCC-----CcEEEEECCCCc
Q 021669 228 RNSTLEASFSPEGMFVISGSGD-----GSVYAWSVRSGK 261 (309)
Q Consensus 228 ~~~~~~~~~sp~g~~l~s~s~D-----g~i~vwd~~~~~ 261 (309)
... ..++. -+++.++.|+.+ ..+.+||+.+.+
T Consensus 253 r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 253 RSA-LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ccc-eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 111 12222 367788888755 357888887654
No 318
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.68 E-value=1.4 Score=41.14 Aligned_cols=278 Identities=6% Similarity=0.034 Sum_probs=149.6
Q ss_pred cceEEEEeCCCCCEEEEeeC--CCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCc
Q 021669 12 GRISSMDFHKSSSYLVTASD--DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 89 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~--D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~ 89 (309)
.....|+++|...+|.-..+ ...|...+.+ |...+.+...-.....+++.+++..++++.. ..+.|...|+....
T Consensus 123 ~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 123 DSPRALALDPAEGFMYWTEWGGKPKIDRAAMD-GSERTTLVPNVGRANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLN 199 (628)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSCSSEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS
T ss_pred CCcccEEEccCCCeEEEeCCCCCCEEEEEeCC-CCceEEEECCCCCcceEEEccccCEEEEEEC--CCCEEEEEcCCCCc
Confidence 34578999985444433332 3455555655 3333333333345678899998888888753 26789999987644
Q ss_pred eEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeec----------------C---------ce--
Q 021669 90 YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----------------G---------RP-- 142 (309)
Q Consensus 90 ~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~----------------~---------~~-- 142 (309)
. ..+........++++.. ++.++|-...+.|...|..+++....+... . ..
T Consensus 200 ~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~ 277 (628)
T 4a0p_A 200 R-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSH 277 (628)
T ss_dssp C-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSS
T ss_pred e-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcch
Confidence 3 44555555667888765 456666666788888886554322221100 0 00
Q ss_pred eEEECC---------CC--------------cEEEEEECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCC-CEE
Q 021669 143 AAAYDD---------QG--------------LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLM 198 (309)
Q Consensus 143 ~~~~~~---------~~--------------~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l 198 (309)
.+...+ .+ .++..+....|+-..+....... ....+ .....+..++|.+.. +++
T Consensus 278 ~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~-~~l~~-~~~~~~~~ld~d~~~~~iy 355 (628)
T 4a0p_A 278 LCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPD-IILPI-HSLRNVRAIDYDPLDKQLY 355 (628)
T ss_dssp EEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCC-EECCC-TTCSCEEEEEEETTTTEEE
T ss_pred hhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCce-EEEEe-hhcCCceEEEEecCCCeEE
Confidence 000001 11 12222233344444332111100 01111 122346778888854 445
Q ss_pred EEEeCCCcEEEEECCCCeEeEEeeec--C-CCCCccceEEECCCCCEE-EEEcCCCcEEEEECCCCceEEEee-cCCCCC
Q 021669 199 LLTTMEGHIHVLDSFRGTLLSTYNVK--P-VSRNSTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWM-SFDTEP 273 (309)
Q Consensus 199 ~~~~~dg~v~i~d~~~~~~~~~~~~~--~-~~~~~~~~~~~sp~g~~l-~s~s~Dg~i~vwd~~~~~~~~~~~-~~~~~v 273 (309)
.+-...+.|+.++.........+... . .....+..+++.+.++.| .+-+..+.|.+.++. ++....+. ..-..+
T Consensus 356 ~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~P 434 (628)
T 4a0p_A 356 WIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRP 434 (628)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCE
T ss_pred EEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCce
Confidence 55556788888876532221111100 0 011245678998886655 466778899999985 55444443 223467
Q ss_pred cEEEECC-CeeEEEEccc-eE-EEeee
Q 021669 274 PVIKWTP-GSLMFVTGSS-EL-SFWIP 297 (309)
Q Consensus 274 ~~l~~~p-~~~~l~s~~~-d~-~~~~~ 297 (309)
..|++.| ++.++.+-.. .. +++..
T Consensus 435 r~iavdp~~g~ly~tD~g~~~~~I~r~ 461 (628)
T 4a0p_A 435 RAVVVNPEKGYMYFTNLQERSPKIERA 461 (628)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEE
T ss_pred eeEEEecCCCeEEEeecCCCCCeEEEE
Confidence 8899999 7887777432 22 56644
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.38 E-value=0.96 Score=37.36 Aligned_cols=172 Identities=13% Similarity=0.138 Sum_probs=85.2
Q ss_pred CCCeEEEecCC-----CcEEEeeCCCce---eeeeeeecC---ceeEEECCCCcEEEE-EEC-----CEEEEEECCCCCc
Q 021669 109 SKDCFISGSLD-----RTVLLWDQRAEK---CQGLLRVQG---RPAAAYDDQGLVFAV-AFG-----GYIRMFDARKYEK 171 (309)
Q Consensus 109 ~~~~l~s~s~D-----g~v~~Wd~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~-~~~-----~~i~~~d~~~~~~ 171 (309)
+++.++.|+.+ ..+.++|+.+.+ ....-.++. ....+.. ++.++.. +.+ ..+.+||+...+=
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 56777778765 468889987766 332211111 1112222 2333333 322 4677888654321
Q ss_pred CCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC-----CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEE
Q 021669 172 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 246 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~ 246 (309)
. .+...........++. -++++++.|+.+ ..+.+||+.+.+-...-.. +...... . +..-+++.++.|
T Consensus 141 ~--~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~-~-~~~~~~~i~v~G 213 (301)
T 2vpj_A 141 S--MLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRSGA-G-VALLNDHIYVVG 213 (301)
T ss_dssp E--EEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC-SSCCBSC-E-EEEETTEEEEEC
T ss_pred E--ECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC-Ccccccc-e-EEEECCEEEEEe
Confidence 0 1111111111222222 378888888765 4588899887654432111 1111111 1 222367788888
Q ss_pred cCC-----CcEEEEECCCCceE--EEeecCCCCCcEEEECCCeeEEEEccc
Q 021669 247 SGD-----GSVYAWSVRSGKEV--ASWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 247 s~D-----g~i~vwd~~~~~~~--~~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
+.+ ..+.+||+.+.+-. ..++........+. -++++++.|+.
T Consensus 214 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~ 262 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGY 262 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred CCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCc
Confidence 765 46899999876432 22211111112222 26777787774
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.18 E-value=0.38 Score=42.95 Aligned_cols=106 Identities=13% Similarity=0.265 Sum_probs=61.3
Q ss_pred CCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC-----CCCccceEEECCC---CCEEEEE-cC------
Q 021669 184 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-----SRNSTLEASFSPE---GMFVISG-SG------ 248 (309)
Q Consensus 184 ~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~sp~---g~~l~s~-s~------ 248 (309)
.....++|.|+|+++++-...+.|++++...+........... .......++|+|| +++|... +.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 4457899999999888766556899888655543222111111 1234557999995 5454444 32
Q ss_pred ------CCcEEEEECCCC--c-----eEE-Eeec-CCCCCcEEEECCCeeEEEEcc
Q 021669 249 ------DGSVYAWSVRSG--K-----EVA-SWMS-FDTEPPVIKWTPGSLMFVTGS 289 (309)
Q Consensus 249 ------Dg~i~vwd~~~~--~-----~~~-~~~~-~~~~v~~l~~~p~~~~l~s~~ 289 (309)
...|.-|+.... + .+. .+.. .......|+|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665332 1 111 1221 112357799999998877644
No 321
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.10 E-value=1.5 Score=44.69 Aligned_cols=193 Identities=16% Similarity=0.264 Sum_probs=109.3
Q ss_pred eCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC-CceEEEeeec
Q 021669 19 FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKGH 97 (309)
Q Consensus 19 ~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~-~~~~~~~~~h 97 (309)
.+|..+.+|-=+ .+++.|+|+++...++...-.. .|.--.|.. ++.+.... +..|.-|++.. ..+++.|..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis-~~~l~lVT----~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWIS-LNTVALVT----DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecC-CCeeEEEc----CCeEEEeccCCCCccHHHHhcc
Confidence 467777776664 7899999998877666555433 233333433 33343333 45799999974 4566666666
Q ss_pred c----cCEEEEEecCCCCeEEEec-------CCCcEEEeeCCCceeeeeeeecCcee----EEE---CCCCcEEEEEE--
Q 021669 98 H----DRVVSLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPA----AAY---DDQGLVFAVAF-- 157 (309)
Q Consensus 98 ~----~~v~~v~~~~~~~~l~s~s-------~Dg~v~~Wd~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~-- 157 (309)
. ..|..-..+++.++++-.| -.|.+.+++.+.+... .+ .++.. ... ..+..+++-+.
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~i--egha~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PI--EGHAASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hh--hHhHhhhheeccCCCCCCceEEEEEEec
Confidence 3 3455556677888765332 3467778876543221 11 11110 000 12233555332
Q ss_pred --CCEEEEEECCCC--CcCCceEEEeCC------CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEe
Q 021669 158 --GGYIRMFDARKY--EKGPFDIFSVGG------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 221 (309)
Q Consensus 158 --~~~i~~~d~~~~--~~~~~~~~~~~~------~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~ 221 (309)
++.+++.++... ..+++....... ...=..++..|+.-..+..-+.-|.++++|+.++..+..-
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhc
Confidence 478999988543 112221111100 0011134566777777777888899999999999887543
No 322
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.95 E-value=1.8 Score=38.25 Aligned_cols=120 Identities=8% Similarity=0.065 Sum_probs=72.2
Q ss_pred CceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeeecCc-eeEEECCCCcEEEE
Q 021669 77 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVFAV 155 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 155 (309)
..++-+-|+.++..+..- .-..-+.-.+|..+.++--. ..++.++|+++........+... ..+..- +...++.
T Consensus 47 ~~~vvIiDl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWi-s~~~l~l 121 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVAL 121 (494)
T ss_dssp CCEEEEEETTSTTSCEEE---ECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEE-ETTEEEE
T ss_pred CCeEEEEECCCCCcceec---ccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEec-CCCeEEE
Confidence 457888898876543211 11112445678877766555 78999999998877666555432 222222 2346666
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCC--CCCeEEEEccCCCEEEEEe
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDI--SDANVVKFSNDGRLMLLTT 202 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~v~~s~dg~~l~~~~ 202 (309)
..+..|+.|++.. +..+.+++..+... .++.....++++++++..|
T Consensus 122 VT~taVyHWsi~~-~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 169 (494)
T 1bpo_A 122 VTDNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (494)
T ss_dssp ECSSEEEEEESSS-SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEE
T ss_pred EcCCeeEEecccC-CCCchhheecchhcccceEEEEEECCCCCeEEEEe
Confidence 7788999999865 33455566544333 2444455677777765433
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.86 E-value=1.9 Score=38.10 Aligned_cols=229 Identities=15% Similarity=0.259 Sum_probs=133.3
Q ss_pred EeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccC-CceEEEeee
Q 021669 18 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKG 96 (309)
Q Consensus 18 ~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~-~~~~~~~~~ 96 (309)
-.+|..+.+|-=+ .+++.|+|+++.+.++...-.+ .|.--.|-.+ +.+.... +..|.-|+++. ..+++.|..
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~-~~l~lVT----~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVT----DNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEET-TEEEEEC----SSEEEEEESSSSCCCEEEEEC
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCC-CeEEEEc----CCeeEEecccCCCCchhheec
Confidence 3578788877765 7899999999888777665543 2434444333 3444433 56899999975 467888887
Q ss_pred ccc----CEEEEEecCCCCeEEEec-------CCCcEEEeeCCCceeeeeeeecCceeE--EE--C---CCCcEEEEEE-
Q 021669 97 HHD----RVVSLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPAA--AY--D---DQGLVFAVAF- 157 (309)
Q Consensus 97 h~~----~v~~v~~~~~~~~l~s~s-------~Dg~v~~Wd~~~~~~~~~~~~~~~~~~--~~--~---~~~~~~~~~~- 157 (309)
|.. .|..-..+++.++++-.+ -.|.+.++..+.+... .+ .++... .+ + .+..+++-+.
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~i--eGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PI--EGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE-EE--CCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc-hh--eeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 754 355566678888765332 2466778876544322 11 122111 11 1 1123555443
Q ss_pred ---CCEEEEEECCCC--CcCCceEEEeCC--C----CCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCC
Q 021669 158 ---GGYIRMFDARKY--EKGPFDIFSVGG--D----ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 226 (309)
Q Consensus 158 ---~~~i~~~d~~~~--~~~~~~~~~~~~--~----~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~ 226 (309)
++++++.++... ..+++....... . ..=..++.+|+.-..+..-+.-|.++++|+.++.++.....
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI--- 298 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI--- 298 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc---
Confidence 378999998543 122232211110 0 11123566788778888888999999999999999876553
Q ss_pred CCCccceEEECCCCCEEEEEcCCCcEEEEECCC
Q 021669 227 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 259 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~ 259 (309)
....+...+.+.+..=++.....|.|.--.+..
T Consensus 299 s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 299 SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred cCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 233444344444444444444556555444443
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.76 E-value=0.5 Score=37.68 Aligned_cols=99 Identities=13% Similarity=0.098 Sum_probs=62.5
Q ss_pred CCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeE------eEEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEEC
Q 021669 184 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL------LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV 257 (309)
Q Consensus 184 ~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~------~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~ 257 (309)
.....++|+|+|.+.+. .+|.++-.+..++.. -..+.. ...+....+.|.|+|.+.++ .||.|+-++-
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~--~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN--GGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC--SCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecc--cccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 35678999999998888 778877777644111 011100 01111356889999999888 5699988887
Q ss_pred CCCceE-----EEeecC-C-CCCcEEEECCCeeEEEEc
Q 021669 258 RSGKEV-----ASWMSF-D-TEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 258 ~~~~~~-----~~~~~~-~-~~v~~l~~~p~~~~l~s~ 288 (309)
.+...- .+..+- . ..+..|.|.|+|.+.+..
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 542210 111111 0 256889999999988777
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.69 E-value=1.8 Score=36.79 Aligned_cols=72 Identities=11% Similarity=0.059 Sum_probs=38.7
Q ss_pred EccCCCEEEEEeCC----------------------CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcC
Q 021669 191 FSNDGRLMLLTTME----------------------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 248 (309)
Q Consensus 191 ~s~dg~~l~~~~~d----------------------g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~ 248 (309)
...++++++.|+.+ ..+.+||+.+.+-...-.. +.... ...+...+++.++.||.
T Consensus 249 ~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~--~~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 249 GISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL-SQGRA--YGVSLPWNNSLLIIGGE 325 (357)
T ss_dssp EEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC-SSCCB--SSEEEEETTEEEEEEEE
T ss_pred EEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC-CCCcc--cceeEEeCCEEEEEeee
Confidence 34467888887742 2467889876543322111 11111 12233357888888886
Q ss_pred CC------cEEEEECCCCceEEE
Q 021669 249 DG------SVYAWSVRSGKEVAS 265 (309)
Q Consensus 249 Dg------~i~vwd~~~~~~~~~ 265 (309)
++ .+.++++++++.+..
T Consensus 326 ~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 326 TAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCCCEeeeEEEEEEcCcEeEee
Confidence 53 456668887776554
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.47 E-value=1.7 Score=35.81 Aligned_cols=172 Identities=15% Similarity=0.170 Sum_probs=84.7
Q ss_pred CCCeEEEecCCC-----cEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEEEEEC-----CEEEEEECCCCCcCCce
Q 021669 109 SKDCFISGSLDR-----TVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAFG-----GYIRMFDARKYEKGPFD 175 (309)
Q Consensus 109 ~~~~l~s~s~Dg-----~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~ 175 (309)
+++.++.|+.++ .+.++|+.+.+....-.++. ....+......++.++.+ ..+.+||+.+.+ ..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~---W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE---WF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE---EE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe---Ee
Confidence 567777877553 57888988776443322221 112222233344444544 356777765421 11
Q ss_pred EE-EeCCCCCCCeEEEEccCCCEEEEEeCC-------CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEc
Q 021669 176 IF-SVGGDISDANVVKFSNDGRLMLLTTME-------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 247 (309)
Q Consensus 176 ~~-~~~~~~~~~~~v~~s~dg~~l~~~~~d-------g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s 247 (309)
.. ..........++ .-++++++.|+.+ ..+.+||+.+.+-...-.. +...... .++ .-+++.++.|+
T Consensus 138 ~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~~-~~~~~iyv~GG 212 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVG--VVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEM-STRRSGA-GVG-VLNNLLYAVGG 212 (302)
T ss_dssp EECCCSSCCBSCEEE--EETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCC-SSCCBSC-EEE-EETTEEEEECC
T ss_pred ecCCCCCcccCceEE--EECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCC-ccccccc-cEE-EECCEEEEECC
Confidence 11 000111111222 2367888877653 3588899877654432111 1111111 122 23678888887
Q ss_pred CCC-----cEEEEECCCCce--EEEeecCCCCCcEEEECCCeeEEEEccc
Q 021669 248 GDG-----SVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 248 ~Dg-----~i~vwd~~~~~~--~~~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
.++ .+.+||..+.+- +..++. ...-..++ .-++++++.|+.
T Consensus 213 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~r~~~~~~-~~~~~i~v~GG~ 260 (302)
T 2xn4_A 213 HDGPLVRKSVEVYDPTTNAWRQVADMNM-CRRNAGVC-AVNGLLYVVGGD 260 (302)
T ss_dssp BSSSSBCCCEEEEETTTTEEEEECCCSS-CCBSCEEE-EETTEEEEECCB
T ss_pred CCCCcccceEEEEeCCCCCEeeCCCCCC-ccccCeEE-EECCEEEEECCc
Confidence 653 689999987543 222211 11111222 236777777774
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.44 E-value=1.8 Score=35.97 Aligned_cols=226 Identities=13% Similarity=0.138 Sum_probs=105.1
Q ss_pred EEEEeeCCCcEEEEEcCCCceee-eeeccccceeEEEEecCCCEEEEEcC----CCC----CceeEEEEccCCceEEEee
Q 021669 25 YLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSK----NGW----DESLRLLSLHDNKYLRYFK 95 (309)
Q Consensus 25 ~l~t~s~D~~v~iWd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~----~g~----d~~i~~~d~~~~~~~~~~~ 95 (309)
+++.|+ ..+-+||..+++=.. .+..........+...++..++.+.. .+. ...+..||..+++-.. +.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence 445555 578899988766322 11111111222233345554444431 111 1236778887765221 11
Q ss_pred ecccC-E-EEEEecCCCCeEEEecCC--------CcEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEEEEE-C---
Q 021669 96 GHHDR-V-VSLSLCSSKDCFISGSLD--------RTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAF-G--- 158 (309)
Q Consensus 96 ~h~~~-v-~~v~~~~~~~~l~s~s~D--------g~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~--- 158 (309)
.-..+ - .++.. -+++.++.|+.+ ..+.++|+.+.+....-.++. ....+......++.++. +
T Consensus 84 ~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 84 PLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp CBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred CCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence 11100 0 01111 256677777743 468888988775443222211 11222222223333333 1
Q ss_pred --CEEEEEECCCCCcCCceEE-EeCCCCCCCeEEEEccCCCEEEEEeCCC-----cEEEEECCCCeEeEEeeecCCCCCc
Q 021669 159 --GYIRMFDARKYEKGPFDIF-SVGGDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRGTLLSTYNVKPVSRNS 230 (309)
Q Consensus 159 --~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~v~~s~dg~~l~~~~~dg-----~v~i~d~~~~~~~~~~~~~~~~~~~ 230 (309)
+.+..||+.+.+ .... ..........++ .-++++++.|+.++ .+.+||+.+.+-...-. .+.....
T Consensus 163 ~~~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~ 236 (315)
T 4asc_A 163 CLNKMCVYDPKKFE---WKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA-FPQERSS 236 (315)
T ss_dssp BCCCEEEEETTTTE---EEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC-CSSCCBS
T ss_pred ccceEEEEeCCCCe---EEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCeEEECCC-CCCcccc
Confidence 467888865421 0000 000011111222 23778888887654 47889988765443211 1111111
Q ss_pred cceEEECCCCCEEEEEcCCC--------------cEEEEECCCCce
Q 021669 231 TLEASFSPEGMFVISGSGDG--------------SVYAWSVRSGKE 262 (309)
Q Consensus 231 ~~~~~~sp~g~~l~s~s~Dg--------------~i~vwd~~~~~~ 262 (309)
. .+ ..-+++.++.|+.++ .+.+||+.+.+-
T Consensus 237 ~-~~-~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 237 L-SL-VSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp C-EE-EEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred e-eE-EEECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 1 12 223677888887642 477889877543
No 328
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.38 E-value=3.5 Score=38.90 Aligned_cols=112 Identities=9% Similarity=0.072 Sum_probs=53.8
Q ss_pred CCCCEEEEeeCC----CcEEEEEcCCCceeeee-e-----ccccc-eeEEEEec-CCCEEEEEcCCCC---CceeEEEEc
Q 021669 21 KSSSYLVTASDD----ESIRLYDVTAATCLKTI-N-----SKKYG-VDLVCFTS-HPTTVIYSSKNGW---DESLRLLSL 85 (309)
Q Consensus 21 ~~~~~l~t~s~D----~~v~iWd~~~~~~~~~~-~-----~~~~~-v~~~~~~~-~~~~~~~~s~~g~---d~~i~~~d~ 85 (309)
.++.+++.||.+ ..+-+||..+++-...- . ..... -..++... ++..++.+..++. -..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456778888864 36778888766432211 1 00001 11223322 4444444432221 245778888
Q ss_pred cCCceEEEeeecccCE-EEEEecCCCCeEEEecCCC--cEEEeeCCCcee
Q 021669 86 HDNKYLRYFKGHHDRV-VSLSLCSSKDCFISGSLDR--TVLLWDQRAEKC 132 (309)
Q Consensus 86 ~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~s~Dg--~v~~Wd~~~~~~ 132 (309)
.+++=...-.-...+. .+++...+++.++.|+.++ .+.+||+.+...
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 7754221110011111 1222223677777777655 577777766543
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.78 E-value=2.5 Score=34.96 Aligned_cols=202 Identities=11% Similarity=0.072 Sum_probs=96.6
Q ss_pred CceeEEEEccCCceEEE--eeecccCEEEEEecCCCCeEEEecCC----CcEEEeeCCCceeeeeeeecC---ceeEEEC
Q 021669 77 DESLRLLSLHDNKYLRY--FKGHHDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRVQG---RPAAAYD 147 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~s~D----g~v~~Wd~~~~~~~~~~~~~~---~~~~~~~ 147 (309)
...+..||..+++-... +......-..+. -+++.++.|+.+ ..+.++|+.+++....-.++. ....+..
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 45688888877652211 111111111111 356677888765 677888988776543322211 1112222
Q ss_pred CCCcEEEEEEC------CEEEEEECCCCCcCCceEE-EeCCCCCCCeEEEEccCCCEEEEEeC---------CCcEEEEE
Q 021669 148 DQGLVFAVAFG------GYIRMFDARKYEKGPFDIF-SVGGDISDANVVKFSNDGRLMLLTTM---------EGHIHVLD 211 (309)
Q Consensus 148 ~~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~v~~s~dg~~l~~~~~---------dg~v~i~d 211 (309)
....++.++.+ ..+.+||+...+ .... ..........+ ..-++++++.|+. -..+.+||
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd 175 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTES---WHTKPSMLTQRCSHGM--VEANGLIYVCGGSLGNNVSGRVLNSCEVYD 175 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTE---EEEECCCSSCCBSCEE--EEETTEEEEECCEESCTTTCEECCCEEEEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCc---eEeCCCCcCCcceeEE--EEECCEEEEECCCCCCCCcccccceEEEeC
Confidence 22233333333 357777765421 1111 00001111122 2237788887764 34588899
Q ss_pred CCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCC-----CcEEEEECCCCce--EEEeecCCCCCcEEEECCCeeE
Q 021669 212 SFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-----GSVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLM 284 (309)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D-----g~i~vwd~~~~~~--~~~~~~~~~~v~~l~~~p~~~~ 284 (309)
+.+.+-...-. .+..... ..+.. -+++.++.|+.+ ..+.+||..+.+- +..++.......++.+ ++++
T Consensus 176 ~~~~~W~~~~~-~p~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 250 (306)
T 3ii7_A 176 PATETWTELCP-MIEARKN-HGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIV 250 (306)
T ss_dssp TTTTEEEEECC-CSSCCBS-CEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEE
T ss_pred CCCCeEEECCC-ccchhhc-ceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEE
Confidence 88765433211 1111111 11222 267788888764 3689999987543 2222211112222333 6777
Q ss_pred EEEccc
Q 021669 285 FVTGSS 290 (309)
Q Consensus 285 l~s~~~ 290 (309)
++.|+.
T Consensus 251 ~v~GG~ 256 (306)
T 3ii7_A 251 YVLAGF 256 (306)
T ss_dssp EEEECB
T ss_pred EEEeCc
Confidence 777773
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.60 E-value=2.7 Score=34.85 Aligned_cols=172 Identities=10% Similarity=0.046 Sum_probs=83.1
Q ss_pred CCCeEEEecC----C-----CcEEEeeCCCceeeeeeeecC---ceeEEECCCCcEEE-EEEC-----CEEEEEECCCCC
Q 021669 109 SKDCFISGSL----D-----RTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFA-VAFG-----GYIRMFDARKYE 170 (309)
Q Consensus 109 ~~~~l~s~s~----D-----g~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~-----~~i~~~d~~~~~ 170 (309)
+++.++.|+. + ..+.++|+.+.+....-.++. ....+.. ++.++. ++.+ ..+..||+.+.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 5667777775 2 467788887776443322211 1112222 233333 3322 457778765421
Q ss_pred cCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCC-----CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEE
Q 021669 171 KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 245 (309)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s 245 (309)
=... ..+........++.+ ++++++.|+.+ ..+.+||+.+.+-...-. .+........+.+ +++.++.
T Consensus 149 W~~~--~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~ 221 (308)
T 1zgk_A 149 WHLV--APMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-MNTIRSGAGVCVL--HNCIYAA 221 (308)
T ss_dssp EEEC--CCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE--TTEEEEE
T ss_pred EeEC--CCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-CCCccccceEEEE--CCEEEEE
Confidence 0000 000001111222222 77888888765 458889987765432211 1111111112222 7778888
Q ss_pred EcCC-----CcEEEEECCCCceEE--EeecCCCCCcEEEECCCeeEEEEccc
Q 021669 246 GSGD-----GSVYAWSVRSGKEVA--SWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 246 ~s~D-----g~i~vwd~~~~~~~~--~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
|+.+ ..+.+||+.+.+-.. .++. ...-.+++. -++++++.|+.
T Consensus 222 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~-~~~~i~v~GG~ 271 (308)
T 1zgk_A 222 GGYDGQDQLNSVERYDVETETWTFVAPMKH-RRSALGITV-HQGRIYVLGGY 271 (308)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEE-ETTEEEEECCB
T ss_pred eCCCCCCccceEEEEeCCCCcEEECCCCCC-CccceEEEE-ECCEEEEEcCc
Confidence 8765 469999998754322 2211 111112222 26677777764
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.49 E-value=0.56 Score=40.07 Aligned_cols=181 Identities=10% Similarity=0.112 Sum_probs=90.6
Q ss_pred CceeEEEEccCCceEEEeeec-ccCEEEEEec--C-CCCeEEEe-cCCCcEEEeeCCCceeeeeeeecCc----eeEE--
Q 021669 77 DESLRLLSLHDNKYLRYFKGH-HDRVVSLSLC--S-SKDCFISG-SLDRTVLLWDQRAEKCQGLLRVQGR----PAAA-- 145 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~h-~~~v~~v~~~--~-~~~~l~s~-s~Dg~v~~Wd~~~~~~~~~~~~~~~----~~~~-- 145 (309)
|+.+..+|.++|+.++.++.- ..++....-. + ++..++.. ..||.+..+|.+++.....+..+.. +...
T Consensus 19 dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~ 98 (339)
T 2be1_A 19 EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKT 98 (339)
T ss_dssp TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEEC
T ss_pred CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCC
Confidence 788999999999998888654 1232221100 1 22333333 6799999999887754433322210 1110
Q ss_pred ---E------CCCCcEEEEEECCEEEEEECCCCCcCCceEEEeCCC--CC-----CCeEEE---Ec--cCCCEEEEEeCC
Q 021669 146 ---Y------DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGD--IS-----DANVVK---FS--NDGRLMLLTTME 204 (309)
Q Consensus 146 ---~------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~-----~~~~v~---~s--~dg~~l~~~~~d 204 (309)
. ..++.+++++.++.+...|+++.+. +...... .. ...+-. +. -.+..+..+..+
T Consensus 99 ~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~----~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~ 174 (339)
T 2be1_A 99 NIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI----ISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTI 174 (339)
T ss_dssp C----------CCEEEEECEEEEEEEEEETTTCCE----EEEESTTCBCC--------------------CCEEEEEEEE
T ss_pred CceeecccccccCCEEEEEecCCEEEEEECCCCcE----EEEEecCCCcccccccccccccccccccccCCCeEEEecce
Confidence 1 1456778888889999988876542 2222111 00 000111 10 113445555555
Q ss_pred CcEEEEECCCCeEe----EEeeecCCCCCccc-eEEECCCCCEEEEEcCCCcEEEEECCCCceEE
Q 021669 205 GHIHVLDSFRGTLL----STYNVKPVSRNSTL-EASFSPEGMFVISGSGDGSVYAWSVRSGKEVA 264 (309)
Q Consensus 205 g~v~i~d~~~~~~~----~~~~~~~~~~~~~~-~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~ 264 (309)
..+.+.+ .+|+.- ..+.... ....+. .-.++.|++++ .++.||.|...|..+++.+-
T Consensus 175 y~v~~~~-~sG~~W~~~~s~~~~~~-~~~~~~~~~~~s~Dg~~~-~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 175 FELGIHS-YDGASYNVTYSTWQQNV-LDVPLALQNTFSKDGMCI-APFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EECEECC-TTSCCCCCEEEEEECCT-TTHHHHTTCSSCSSSCCE-EEETTTEEEEECSTTCCEEE
T ss_pred EEEEEEC-CCCCeEEEecccccccc-cccccccccccccCCcEE-EECCCCEEEEEECCCCcEEE
Confidence 5665554 333210 0010000 000000 00112456774 47889999999998887654
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.30 E-value=7.5 Score=39.06 Aligned_cols=248 Identities=11% Similarity=0.095 Sum_probs=125.5
Q ss_pred CcEEEEEcCCCceeeeeeccc-cceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEE-eeecccCEEEEEecCC-
Q 021669 33 ESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSS- 109 (309)
Q Consensus 33 ~~v~iWd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~-~~~h~~~v~~v~~~~~- 109 (309)
+.||+.+...+..+..+.... ..+..++. ++.+++.++ .+.+.++.+..++.... -..-.+.|.++++.|.
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~--n~~~vvva~----g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~ 565 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASC--NSSQVVVAV----GRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 565 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEE--CSSEEEEEE----TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCS
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEe--CCCEEEEEE----CCEEEEEEeeCCceeeecccCCCCceEEEEeecCC
Confidence 456667665555555555332 23444443 344666664 24677777766542211 1223568999998753
Q ss_pred -----CCeEEEecC-CCcEEEeeCCCceeeeeeeecC--ce--e-EEECCCCcEEEEE-ECCEEEEEECCC--CCcCCce
Q 021669 110 -----KDCFISGSL-DRTVLLWDQRAEKCQGLLRVQG--RP--A-AAYDDQGLVFAVA-FGGYIRMFDARK--YEKGPFD 175 (309)
Q Consensus 110 -----~~~l~s~s~-Dg~v~~Wd~~~~~~~~~~~~~~--~~--~-~~~~~~~~~~~~~-~~~~i~~~d~~~--~~~~~~~ 175 (309)
+++++.|.+ |+++++.++.+-+......+.. .+ . ........++.++ .+|.+..+.+.. .......
T Consensus 566 ~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r 645 (1158)
T 3ei3_A 566 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRK 645 (1158)
T ss_dssp SSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEE
T ss_pred CCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccce
Confidence 358888987 9999999987654443333221 11 1 1111222333344 466665554332 1111111
Q ss_pred EEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCcc-ceEEECCCC--CEEEEEcCCCcE
Q 021669 176 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEG--MFVISGSGDGSV 252 (309)
Q Consensus 176 ~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~sp~g--~~l~s~s~Dg~i 252 (309)
...++. .++.-..+...|..-+.+..+...-++-.. +..... +.....+ ..+.|+... .-++.. .++.+
T Consensus 646 ~~~LG~--~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s----~l~~~~v~~~~~F~se~~~~g~v~~-~~~~L 717 (1158)
T 3ei3_A 646 KVTLGT--QPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS----NVNLKEVNYMCPLNSDGYPDSLALA-NNSTL 717 (1158)
T ss_dssp EEECCS--SCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE----EBSSSCCCEEEEECCSSSTTEEEEE-CSSCE
T ss_pred eEEcCC--CceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe----ccChHHhceEeccCcccCCCcEEEE-cCCce
Confidence 122221 244444455445444444445544444332 222211 1111122 234565421 334433 34569
Q ss_pred EEEECCCCce--EEEeecCCCCCcEEEECCCeeEEEEccceEEEe
Q 021669 253 YAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTGSSELSFW 295 (309)
Q Consensus 253 ~vwd~~~~~~--~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~ 295 (309)
+|..+.+-+. +.++ .....+..++++|..+.++.+..+...+
T Consensus 718 rI~~i~~~~~~~~~~i-pL~~Tprri~y~~~~~~~~v~~~~~~~~ 761 (1158)
T 3ei3_A 718 TIGTIDEIQKLHIRTV-PLYESPRKICYQEVSQCFGVLSSRIEVQ 761 (1158)
T ss_dssp EEEEECCSSSEEEEEE-ECSSEEEEEEEEGGGTEEEEEEEEEEEE
T ss_pred EEEEecccCCeeEEEE-eCCCCceEEEEcCCCCEEEEEEEecccc
Confidence 9998865332 3333 3456788999999988877766654443
No 333
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.53 E-value=9.5 Score=36.11 Aligned_cols=269 Identities=12% Similarity=0.060 Sum_probs=137.0
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeee-eecc----ccceeEEEEecCCCEEEEEcCCCCCceeEEEEcc
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSK----KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 86 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~-~~~~----~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~ 86 (309)
..|.++..+++|.+.+.. . +-+..+|..+++.... .... ...|..+....++..+..+. ++-+..+|..
T Consensus 146 ~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt----~~Gl~~~~~~ 219 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGT-Y-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT----EGYLFQYFPS 219 (758)
T ss_dssp SCEEEEEECTTCCEEEEE-T-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE----EEEEEEEETT
T ss_pred CeEEEEEEcCCCCEEEEe-C-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE----CCCCeEEcCC
Confidence 458888888888776533 3 4577788766543211 1111 11255555555555454444 2347788877
Q ss_pred CCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee-------c--CceeEEECCCCcEEEEEE
Q 021669 87 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-------Q--GRPAAAYDDQGLVFAVAF 157 (309)
Q Consensus 87 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~ 157 (309)
+++......-....|.++...++++.. .|..+ -+.++|..+.+....... . .......+..+.+..+..
T Consensus 220 ~~~~~~~~~l~~~~i~~i~~d~~g~lW-igT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~ 297 (758)
T 3ott_A 220 TGQIKQTEAFHNNSIKSLALDGNGDLL-AGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTD 297 (758)
T ss_dssp TTEEEEEEEEEEEEEEEEEECTTCCEE-EEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEES
T ss_pred CCeEEeccCCCCCeEEEEEEcCCCCEE-EEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeC
Confidence 765332212223457887776666544 34444 567788765543221110 1 112233455666666665
Q ss_pred CCEEEEEECCCCCcCCceEEEeC-----CCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCe--EeEEeee----cCC
Q 021669 158 GGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNV----KPV 226 (309)
Q Consensus 158 ~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~--~~~~~~~----~~~ 226 (309)
.| +.++... ..+..+... .....+.++...++|.+.+.. .+| +..++..++. ....+.. ...
T Consensus 298 ~G-l~~~~~~----~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l 370 (758)
T 3ott_A 298 YG-ISLSRYN----SALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-ANG-LIRFTDPAGERHDAIWYRMGDKTYPL 370 (758)
T ss_dssp SS-EEEECCC----C-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-TTE-EEEESCTTSSCCCCEEECTTCSSSCC
T ss_pred Cc-ccccccC----CceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-CCc-ceeecccccccceeEEeccCCcCCCC
Confidence 55 4444221 122222111 112346777788888876554 454 5566655431 1112211 111
Q ss_pred CCCccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEee-c-----CCCCCcEEEECCCeeEEEEc-cceEEEeee
Q 021669 227 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM-S-----FDTEPPVIKWTPGSLMFVTG-SSELSFWIP 297 (309)
Q Consensus 227 ~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~-~-----~~~~v~~l~~~p~~~~l~s~-~~d~~~~~~ 297 (309)
....|.++.-.++|+..+. + ++-+..+|..+++...-.. . ....|.++...+++++.+.. +..+..+.+
T Consensus 371 ~~~~v~~i~~d~~g~lWig-t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~ 446 (758)
T 3ott_A 371 SHNRIRHIYEDKEQQLWIA-T-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDK 446 (758)
T ss_dssp SCSCEEEEEECTTSCEEEE-E-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEH
T ss_pred CCCceEEEEECCCCCEEEE-e-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEcc
Confidence 2344666767777776553 3 4569999998765432111 1 11235667777777654433 334554443
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.08 E-value=15 Score=37.66 Aligned_cols=216 Identities=12% Similarity=0.243 Sum_probs=106.2
Q ss_pred CCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCCC
Q 021669 32 DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 111 (309)
Q Consensus 32 D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~ 111 (309)
..+|-|-|+..+..... .+.....+-.+|..+-++.-+ ..++.++|+++.+.++.+.-... |.-=.|-.+..
T Consensus 47 ~~~vvIidl~~~~~~~r---rpi~AdsAIMnP~~~iiALra----g~~lQiFnl~~k~klks~~~~e~-VvfWkWis~~~ 118 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIR---RPISADSAIMNPASKVIALKA----GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLNT 118 (1630)
T ss_pred CceEEEEECCCCCCccc---ccccchhhccCCCcceEEEec----CCeEEEeehHHhhhhcccccCCC-ceEEEecCCCe
Confidence 34677777765443211 011112233445554444332 46899999998887777665444 43334543322
Q ss_pred -eEEEecCCCcEEEeeCCC-ceeeeeeeec----CceeEEE--CCCCcEEE-EEE-------CCEEEEEECCCCCcCCc-
Q 021669 112 -CFISGSLDRTVLLWDQRA-EKCQGLLRVQ----GRPAAAY--DDQGLVFA-VAF-------GGYIRMFDARKYEKGPF- 174 (309)
Q Consensus 112 -~l~s~s~Dg~v~~Wd~~~-~~~~~~~~~~----~~~~~~~--~~~~~~~~-~~~-------~~~i~~~d~~~~~~~~~- 174 (309)
-|+| +..|.-|++.. ..+...+..+ +.-...| +++...+. +|. .|.+.+|.........+
T Consensus 119 l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ie 195 (1630)
T 1xi4_A 119 VALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (1630)
T ss_pred eEEEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhh
Confidence 3444 67899999863 2232222111 1111112 23333222 222 37888888765332211
Q ss_pred ------eEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCC---eEe---EEee--ecCC-CCCccceEEECCC
Q 021669 175 ------DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG---TLL---STYN--VKPV-SRNSTLEASFSPE 239 (309)
Q Consensus 175 ------~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~---~~~---~~~~--~~~~-~~~~~~~~~~sp~ 239 (309)
..+.+.+...+...++|..... ..++++|.++... ... .... ..+. ...-...+..|+.
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~------~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k 269 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQ------AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 269 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecC------CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccc
Confidence 1122222222222333322111 1268888887432 110 0000 1110 1112345667777
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEE
Q 021669 240 GMFVISGSGDGSVYAWSVRSGKEVA 264 (309)
Q Consensus 240 g~~l~s~s~Dg~i~vwd~~~~~~~~ 264 (309)
-..+...+.-|.|+++|+.|+..+-
T Consensus 270 ~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 270 HDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred cCEEEEEecCceEEEEecccchhhh
Confidence 7788888899999999999987653
No 335
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.88 E-value=6.8 Score=33.28 Aligned_cols=216 Identities=11% Similarity=0.193 Sum_probs=113.3
Q ss_pred CCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEeeecccCEEEEEecCCC
Q 021669 31 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 110 (309)
Q Consensus 31 ~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~ 110 (309)
.+.+|-|-|+..+..... .+-....+-.+|..+-++.-+ ..++.++|+++.+.++.+.-.. .|.-=.|-.+.
T Consensus 47 ~~~~VvIiDl~n~~~~~R---rpi~AdsAIMnP~~~ViALra----g~~LQiFnletK~klks~~~~e-~VvfWkWis~~ 118 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIR---RPISADSAIMNPASKVIALKA----GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN 118 (365)
T ss_dssp TEEEEEEEETTSTTSCEE---EECCCSEEEECSSSSEEEEEE----TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSS
T ss_pred CCCEEEEEECCCCCCccc---cccccceeeeCCCccEEEEec----CCeEEEechHHhhhhcceecCC-ccEEEEecCCC
Confidence 334677778776443211 111122344566655555443 3689999999998888877544 45444555433
Q ss_pred CeEEEecCCCcEEEeeCCC-ceeeeeeeec----CceeEEE--CCCCcEEE-EEE-------CCEEEEEECCCCCcCCce
Q 021669 111 DCFISGSLDRTVLLWDQRA-EKCQGLLRVQ----GRPAAAY--DDQGLVFA-VAF-------GGYIRMFDARKYEKGPFD 175 (309)
Q Consensus 111 ~~l~s~s~Dg~v~~Wd~~~-~~~~~~~~~~----~~~~~~~--~~~~~~~~-~~~-------~~~i~~~d~~~~~~~~~~ 175 (309)
.|+-.. +..|.-|+++. ..+.+.+..+ +.-...| +++...++ ++. .|.+.+|..+....
T Consensus 119 -~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s---- 192 (365)
T 2xzh_A 119 -TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS---- 192 (365)
T ss_dssp -EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE----
T ss_pred -eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc----
Confidence 333332 67999999864 2333333221 1111222 33333222 221 26788888764322
Q ss_pred EEEeCCCCCCCeEEEE---ccCC----C-EEE--EEeC-CCcEEEEECCCC---eE---eEEee--ecCC-CCCccceEE
Q 021669 176 IFSVGGDISDANVVKF---SNDG----R-LML--LTTM-EGHIHVLDSFRG---TL---LSTYN--VKPV-SRNSTLEAS 235 (309)
Q Consensus 176 ~~~~~~~~~~~~~v~~---s~dg----~-~l~--~~~~-dg~v~i~d~~~~---~~---~~~~~--~~~~-~~~~~~~~~ 235 (309)
..+++| +.+| -.+| . +++ .-+. .++++|.++... .. .+... ..+. ...-...+.
T Consensus 193 -Q~ieGh-----aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamq 266 (365)
T 2xzh_A 193 -QPIEGH-----AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 266 (365)
T ss_dssp -EEECCS-----EEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEE
T ss_pred -ceeeee-----eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEE
Confidence 223333 1122 1111 1 122 1111 258899887432 11 11111 1111 122334677
Q ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceEEEe
Q 021669 236 FSPEGMFVISGSGDGSVYAWSVRSGKEVASW 266 (309)
Q Consensus 236 ~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~ 266 (309)
.|+.-..+..-..-|.|++||++++.++..-
T Consensus 267 vs~kygviyviTK~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 267 ISEKHDVVFLITKYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ecccCCEEEEEeCCcEEEEEEcccCcEEEEe
Confidence 7887788888889999999999999887543
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.45 E-value=5.7 Score=31.65 Aligned_cols=174 Identities=10% Similarity=0.063 Sum_probs=85.6
Q ss_pred CCEEEEeeCCCcEEEEEcCCCc------eeeeeec-cccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEee
Q 021669 23 SSYLVTASDDESIRLYDVTAAT------CLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 95 (309)
Q Consensus 23 ~~~l~t~s~D~~v~iWd~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~ 95 (309)
..+|.....| +++.=...++. ....+.. .=..+..++|+|++...++ + ++.+.-.+..+.+...-+.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~----~G~Ly~~~~~t~~~~~W~~ 77 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-L----NDKIYKGTPPTHDNDNWMG 77 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-E----TTEEEEESCCCSTTCCHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-e----CCeEEEECCCCCCcccccc
Confidence 4567777777 54443333322 1112211 0124678999997774333 3 4455555553322111111
Q ss_pred ecccC--------EEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeee----ee-----cCceeEEECCCCcEEEEEEC
Q 021669 96 GHHDR--------VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL----RV-----QGRPAAAYDDQGLVFAVAFG 158 (309)
Q Consensus 96 ~h~~~--------v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~ 158 (309)
-... -.++-|.|+|.+-++ .||.|.-|+.-+.....-+ .+ .....+.+.+++.+.++. +
T Consensus 78 -s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-d 153 (236)
T 1tl2_A 78 -RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-G 153 (236)
T ss_dssp -HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-T
T ss_pred -cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-C
Confidence 1122 367888899986666 5799988875322111110 00 123456778999999999 8
Q ss_pred CEEEEEECCCCCcCC-c-eEEEeC-CCCCCCeEEEEccCCCEEEEEeCCCcEE
Q 021669 159 GYIRMFDARKYEKGP-F-DIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHIH 208 (309)
Q Consensus 159 ~~i~~~d~~~~~~~~-~-~~~~~~-~~~~~~~~v~~s~dg~~l~~~~~dg~v~ 208 (309)
+.+.-.-........ + ....+. ..-.....+.|+|+|.+.+.. ++.++
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 875432211100000 0 000111 111122345588888777666 66554
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.08 E-value=8.2 Score=32.92 Aligned_cols=230 Identities=10% Similarity=0.086 Sum_probs=115.1
Q ss_pred cceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCcee--eee----eccccceeEEEEecC---CCEEEEEcCCCCCceeEE
Q 021669 12 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL--KTI----NSKKYGVDLVCFTSH---PTTVIYSSKNGWDESLRL 82 (309)
Q Consensus 12 ~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~~~~~s~~g~d~~i~~ 82 (309)
..-..|+|.|||+++++--..+.|++++..+++.. ..+ .........++++|+ ...++++.....+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 45678999999998887765899999987655432 111 122345678899885 344443211111345555
Q ss_pred EEccCC--------ceEEEee------ecccCEEEEEecCCCCeEEEecC-------------CCcEEEeeCCCce----
Q 021669 83 LSLHDN--------KYLRYFK------GHHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK---- 131 (309)
Q Consensus 83 ~d~~~~--------~~~~~~~------~h~~~v~~v~~~~~~~~l~s~s~-------------Dg~v~~Wd~~~~~---- 131 (309)
|.+..+ +....+. .| ....+.|.|||++.++.+. -|.|.-.+....-
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 555431 1111121 23 3457899999997777542 2444444543210
Q ss_pred e---eeeeeec--CceeEEECCCCcEEEEEEC----CEEEEEECC-CC-------C--cCC--ceEEEeCCCCCCCeEEE
Q 021669 132 C---QGLLRVQ--GRPAAAYDDQGLVFAVAFG----GYIRMFDAR-KY-------E--KGP--FDIFSVGGDISDANVVK 190 (309)
Q Consensus 132 ~---~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~i~~~d~~-~~-------~--~~~--~~~~~~~~~~~~~~~v~ 190 (309)
+ ...+... +-..+.+++.+.++++-.+ ..|.+...- ++ . ... ..++....+......++
T Consensus 190 Pf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~ 269 (347)
T 3das_A 190 PFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIA 269 (347)
T ss_dssp SSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEE
T ss_pred CCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceE
Confidence 0 0111111 1224566676777665532 133333211 00 0 000 00111111111234555
Q ss_pred EccCCCEEEEEeCCCcEEEEECCCCeEe---EEeeecCCCCCccceEEECCCCCEEEEE
Q 021669 191 FSNDGRLMLLTTMEGHIHVLDSFRGTLL---STYNVKPVSRNSTLEASFSPEGMFVISG 246 (309)
Q Consensus 191 ~s~dg~~l~~~~~dg~v~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~sp~g~~l~s~ 246 (309)
|. +|..+...-..+.|....+...... ..+. .....++..++..|||..+++-
T Consensus 270 ~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l--~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 270 YA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFL--EGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp EE-TTEEEEEESTTCSEEEEEEETTEESSCCEEES--TTTSSCEEEEEEEETTEEEEEE
T ss_pred EE-cCceeeccccCCEEEEEEecCCceecceEEee--cCCCCCccEEEECCCCcEEEEE
Confidence 65 4666666666667766665443321 1111 1123466788888998766554
No 338
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.65 E-value=2.4 Score=37.87 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=56.8
Q ss_pred CeEEEEccCCC-EEEEEeCCCcEEEEECCCCe---EeEEee--ecC----CCCCccceEEECCC----CCEEEEEcCC--
Q 021669 186 ANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGT---LLSTYN--VKP----VSRNSTLEASFSPE----GMFVISGSGD-- 249 (309)
Q Consensus 186 ~~~v~~s~dg~-~l~~~~~dg~v~i~d~~~~~---~~~~~~--~~~----~~~~~~~~~~~sp~----g~~l~s~s~D-- 249 (309)
...++|.|||. .++.+...|.|++++..... .+..+. ... ....-...++|+|+ +...++-+.+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 46789999996 34445578999999753221 111111 000 01234567999996 4444443321
Q ss_pred ----------CcEEEEECCCC----------ceEEEee----cCCCCCcEEEECCCeeEEEEccc
Q 021669 250 ----------GSVYAWSVRSG----------KEVASWM----SFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 250 ----------g~i~vwd~~~~----------~~~~~~~----~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
..|.-|.+..+ +.+..+. .|. ...|+|.||+.+.++.+.
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeCC
Confidence 13444666421 2222332 233 467999999988777553
No 339
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.60 E-value=14 Score=34.91 Aligned_cols=260 Identities=9% Similarity=0.040 Sum_probs=130.6
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEE
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~ 92 (309)
.|.++..++++..|-.|. ++-+..+|..+++...........|..++...++..-+ +.. +-+.+++..+++...
T Consensus 192 ~i~~i~~d~~~~~lWigt-~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~----~Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGT-EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD----NGLYVYHNDTTPLQH 265 (758)
T ss_dssp CEEEEEEETTTTEEEEEE-EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET----TEEEEECCTTSCCEE
T ss_pred eeEEEEEECCCCEEEEEE-CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC----CceeEEecCCCcEEE
Confidence 478888887766433333 34577888776543221111223355555555554333 332 247778876654322
Q ss_pred Eee-------ecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCceeeeeeee---------cCceeEEECCCCcEEEEE
Q 021669 93 YFK-------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------QGRPAAAYDDQGLVFAVA 156 (309)
Q Consensus 93 ~~~-------~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 156 (309)
... -....|.++....+++ |..|...| +.+... ... ...+.. ........+.++.+..+.
T Consensus 266 ~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~-~~~-~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt 341 (758)
T 3ott_A 266 IIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRY-NSA-LQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG 341 (758)
T ss_dssp ECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECC-CC--CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred EEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-cccccc-CCc-eeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence 211 0224588887766665 44455556 444432 111 111110 011223445566666665
Q ss_pred ECCEEEEEECCCCCcCCceEEEeCC-----CCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecC---CCC
Q 021669 157 FGGYIRMFDARKYEKGPFDIFSVGG-----DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP---VSR 228 (309)
Q Consensus 157 ~~~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~---~~~ 228 (309)
.+.+..++........+..+.... ....+.++...++|++.+. + ++-+..+|..++.......... ...
T Consensus 342 -~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig-t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~ 418 (758)
T 3ott_A 342 -ANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIA-T-DGSINRYDYATRQFIHYNIVDNTGTYNT 418 (758)
T ss_dssp -TTEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEE-E-TTEEEEEETTTTEEEEEEEECCC--CBS
T ss_pred -CCcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEE-e-CCcHhhcCcCCCcEEEeecCCCcCCCCC
Confidence 445666665432212222222110 1134677777888876554 4 4578889988776543211111 122
Q ss_pred CccceEEECCCCCEEEEEcCCCcEEEEECCCC-----ceE---EEee---cCC-CCCcEEEECCCeeEEE
Q 021669 229 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSG-----KEV---ASWM---SFD-TEPPVIKWTPGSLMFV 286 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~-----~~~---~~~~---~~~-~~v~~l~~~p~~~~l~ 286 (309)
..+.++...++|+.. .|+..+-+.++|..+. +.. ..+. +.+ ..|.++...+++++-+
T Consensus 419 ~~v~~i~~d~~g~lW-igT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi 487 (758)
T 3ott_A 419 NWTYYIFEDTAGQLW-ISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWV 487 (758)
T ss_dssp SSEEEEEECTTSEEE-EEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEE
T ss_pred ceEEEEEEcCCCCEE-EEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEE
Confidence 345566666676654 4665666899986431 111 1111 111 2367777778777665
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.58 E-value=1.7 Score=42.70 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=32.9
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 50 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~ 50 (309)
.|.++...++..++.|-+.|+++|+|++.+++|+.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677778888899999999999999999999987643
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.92 E-value=1.3 Score=40.41 Aligned_cols=73 Identities=15% Similarity=0.176 Sum_probs=48.7
Q ss_pred eEEEEccCCCEEEEEe-CCCcEEEEECCCC------eEe---EEeeecCCCCCccceEEECCCCCEEEEEcCCCcEEEEE
Q 021669 187 NVVKFSNDGRLMLLTT-MEGHIHVLDSFRG------TLL---STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWS 256 (309)
Q Consensus 187 ~~v~~s~dg~~l~~~~-~dg~v~i~d~~~~------~~~---~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~i~vwd 256 (309)
-.+.++|||++++.++ .+.+|.++|..+- +.+ ..........-..+-.+|.++|.-..|--.|..|--|+
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 3467899999987765 5889999997631 110 00001111122345689999996666667999999999
Q ss_pred CCC
Q 021669 257 VRS 259 (309)
Q Consensus 257 ~~~ 259 (309)
+..
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 965
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.91 E-value=8.9 Score=31.71 Aligned_cols=226 Identities=12% Similarity=0.134 Sum_probs=103.1
Q ss_pred CEEEEeeCCCcEEEEEcCCCceeee-eeccccceeEEEEecCCCEEEEEcCC----C----CCceeEEEEccCCceEEE-
Q 021669 24 SYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKN----G----WDESLRLLSLHDNKYLRY- 93 (309)
Q Consensus 24 ~~l~t~s~D~~v~iWd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~s~~----g----~d~~i~~~d~~~~~~~~~- 93 (309)
.+++-|+. .+..||..+++-... +..........+...++..++.+... + ....+..||..+++-...
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 34555553 478899887664331 11101111222333445545554310 1 011266788776642211
Q ss_pred -eeecccCEEEEEecCCCCeEEEecCC-------CcEEEeeCCCceeeeeeeecC---ceeEEECCCCcEE-EEEE----
Q 021669 94 -FKGHHDRVVSLSLCSSKDCFISGSLD-------RTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVF-AVAF---- 157 (309)
Q Consensus 94 -~~~h~~~v~~v~~~~~~~~l~s~s~D-------g~v~~Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~---- 157 (309)
+...... .++.. -+++.++.|+.+ ..+.++|+.+.+....-.++. ....+. .++.++ .++.
T Consensus 95 ~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 95 PLPSARCL-FGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDK 171 (318)
T ss_dssp CBSSCBCS-CEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSS
T ss_pred CCCccccc-cceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCC
Confidence 1100011 11121 256777777754 357788887776543322211 111222 233333 3332
Q ss_pred --CCEEEEEECCCCCcCCceEEE-eCCCCCCCeEEEEccCCCEEEEEeCCC-----cEEEEECCCCeEeEEeeecCCCCC
Q 021669 158 --GGYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRGTLLSTYNVKPVSRN 229 (309)
Q Consensus 158 --~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~v~~s~dg~~l~~~~~dg-----~v~i~d~~~~~~~~~~~~~~~~~~ 229 (309)
-+.+..||+.+.+ ..... .........++. -++++++.|+.++ .+.+||+.+.+-..... .+....
T Consensus 172 ~~~~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~ 245 (318)
T 2woz_A 172 KCTNRVFIYNPKKGD---WKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE-FPQERS 245 (318)
T ss_dssp CBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCC-CSSCCB
T ss_pred CccceEEEEcCCCCE---EEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCC-CCCccc
Confidence 1357888876421 11110 000111112222 3678888887543 46788887765432211 111111
Q ss_pred ccceEEECCCCCEEEEEcCC--------------CcEEEEECCCCce
Q 021669 230 STLEASFSPEGMFVISGSGD--------------GSVYAWSVRSGKE 262 (309)
Q Consensus 230 ~~~~~~~sp~g~~l~s~s~D--------------g~i~vwd~~~~~~ 262 (309)
. ..+...+++.++.|+.+ ..+.+||+.+.+-
T Consensus 246 ~--~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 246 S--ISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp S--CEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred c--eEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 1 11222367787887754 3578889877543
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.42 E-value=12 Score=31.45 Aligned_cols=94 Identities=9% Similarity=-0.007 Sum_probs=44.4
Q ss_pred CCCEEEEEeC------CCcEEEEEC--CCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCC----------------
Q 021669 194 DGRLMLLTTM------EGHIHVLDS--FRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD---------------- 249 (309)
Q Consensus 194 dg~~l~~~~~------dg~v~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D---------------- 249 (309)
++++++.|+. ...+..||. .+.+-.. ....+.........+...+++.++.|+.+
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~ 278 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK-LAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAH 278 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CEEEE-CCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTT
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCcEEe-cCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceecc
Confidence 6777777764 235667775 4333221 11111111111112333467777888742
Q ss_pred ------CcEEEEECCCCc--eEEEeecCCCCCcEEEECCCeeEEEEccc
Q 021669 250 ------GSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSS 290 (309)
Q Consensus 250 ------g~i~vwd~~~~~--~~~~~~~~~~~v~~l~~~p~~~~l~s~~~ 290 (309)
..+.+||+.+.+ .+..++.-... ..+...++++++.|+.
T Consensus 279 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 279 EGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGE 325 (357)
T ss_dssp TTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEE
T ss_pred ccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeee
Confidence 257899987643 34433321111 2223346788888774
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.06 E-value=15 Score=31.19 Aligned_cols=115 Identities=7% Similarity=-0.013 Sum_probs=70.4
Q ss_pred CEEEEeeCCCcEEEEEcCCCceeeeeeccc-cceeEEEE--ecCCCEEEEEcCCCCCceeEEEEccCCceEEEeee----
Q 021669 24 SYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCF--TSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG---- 96 (309)
Q Consensus 24 ~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~~---- 96 (309)
.+++.++.||.|.-.|..+|+.+..+.... .+.....- .+.+..++.... ..|+.+..++.++|.....+.-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p-~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEP-FGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECC-STTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEE-CCCCEEEEEECCCCcEEeeeccccce
Confidence 478889999999999999999988877651 11111000 011223443311 1388999999888765444331
Q ss_pred cccCEEEE---Ee-----cCCCCeEEEecCCCcEEEeeCCCceeeeeeeec
Q 021669 97 HHDRVVSL---SL-----CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ 139 (309)
Q Consensus 97 h~~~v~~v---~~-----~~~~~~l~s~s~Dg~v~~Wd~~~~~~~~~~~~~ 139 (309)
...++..- .+ ...+..+.+++.++.+...|+++++.+......
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 11122210 00 013457889999999999999999887776543
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.29 E-value=14 Score=30.35 Aligned_cols=203 Identities=9% Similarity=0.085 Sum_probs=96.1
Q ss_pred ceeEEEEccCCceEE-EeeecccCEEEEEecCCCCeEEEecC----C-------CcEEEeeCCCceeeeeeeecC---ce
Q 021669 78 ESLRLLSLHDNKYLR-YFKGHHDRVVSLSLCSSKDCFISGSL----D-------RTVLLWDQRAEKCQGLLRVQG---RP 142 (309)
Q Consensus 78 ~~i~~~d~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~----D-------g~v~~Wd~~~~~~~~~~~~~~---~~ 142 (309)
..+..||..+++-.. .+.....+........+++.++.|+. + ..+..+|+.+++....-.++. ..
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 92 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF 92 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce
Confidence 467788887766221 11111122222233356777788874 1 126778888776543222221 11
Q ss_pred eEEECCCCcEEEEEEC--------CEEEEEECCCCCcCCceEE-EeCCCCCCCeEEEEccCCCEEEEEeC-C-----CcE
Q 021669 143 AAAYDDQGLVFAVAFG--------GYIRMFDARKYEKGPFDIF-SVGGDISDANVVKFSNDGRLMLLTTM-E-----GHI 207 (309)
Q Consensus 143 ~~~~~~~~~~~~~~~~--------~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~v~~s~dg~~l~~~~~-d-----g~v 207 (309)
..+......++.++.+ +.+.+||+...+ .... .+........ +..-++++++.|+. + ..+
T Consensus 93 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~~~ 167 (315)
T 4asc_A 93 GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK---WGESDPLPYVVYGHT--VLSHMDLVYVIGGKGSDRKCLNKM 167 (315)
T ss_dssp EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE---EEECCCCSSCCBSCE--EEEETTEEEEECCBCTTSCBCCCE
T ss_pred eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc---EeECCCCCCccccee--EEEECCEEEEEeCCCCCCcccceE
Confidence 1222222233333321 357777765421 0000 0000111112 22347788888876 2 468
Q ss_pred EEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCC-----cEEEEECCCCce--EEEeecCCCCCcEEEECC
Q 021669 208 HVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-----SVYAWSVRSGKE--VASWMSFDTEPPVIKWTP 280 (309)
Q Consensus 208 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg-----~i~vwd~~~~~~--~~~~~~~~~~v~~l~~~p 280 (309)
.+||+.+.+-...-. .........+..-+++.++.|+.++ .+.+||..+.+- +..++. ...-.+++. -
T Consensus 168 ~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~-~ 242 (315)
T 4asc_A 168 CVYDPKKFEWKELAP---MQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ-ERSSLSLVS-L 242 (315)
T ss_dssp EEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS-CCBSCEEEE-E
T ss_pred EEEeCCCCeEEECCC---CCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC-cccceeEEE-E
Confidence 889988765433211 1111111112223778888887765 588999987543 222211 111112222 2
Q ss_pred CeeEEEEccc
Q 021669 281 GSLMFVTGSS 290 (309)
Q Consensus 281 ~~~~l~s~~~ 290 (309)
++++++.|+.
T Consensus 243 ~~~l~v~GG~ 252 (315)
T 4asc_A 243 VGTLYAIGGF 252 (315)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEECCc
Confidence 5677777765
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=84.20 E-value=8.4 Score=35.26 Aligned_cols=116 Identities=12% Similarity=0.124 Sum_probs=67.8
Q ss_pred EEECCCCcEEEEEE--CCEEEEEECCCCCc----C---CceEEEeCCCC-CCCeEEEEccCCCEEEEEeCCCcEEEEECC
Q 021669 144 AAYDDQGLVFAVAF--GGYIRMFDARKYEK----G---PFDIFSVGGDI-SDANVVKFSNDGRLMLLTTMEGHIHVLDSF 213 (309)
Q Consensus 144 ~~~~~~~~~~~~~~--~~~i~~~d~~~~~~----~---~~~~~~~~~~~-~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~ 213 (309)
+...|++.++.++. +.++.++|+++... . +-......... ....-.+|.++|..+.+-..|..|.-|++.
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEecc
Confidence 45567887776664 57899999875311 0 00111111111 133557899999777777789999999975
Q ss_pred CC----------eEeEEeeecCC--CCCccceEEECCCCCEEEEE---cCCCcE----------EEEECCC
Q 021669 214 RG----------TLLSTYNVKPV--SRNSTLEASFSPEGMFVISG---SGDGSV----------YAWSVRS 259 (309)
Q Consensus 214 ~~----------~~~~~~~~~~~--~~~~~~~~~~sp~g~~l~s~---s~Dg~i----------~vwd~~~ 259 (309)
+. ..+.....+.+ |......-.-.|||++|++. |.|..+ .+.|+..
T Consensus 408 ~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 408 EAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp HHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred HHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 43 34444443321 11110111235899999998 667644 7888853
No 347
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=82.78 E-value=1.9 Score=40.49 Aligned_cols=39 Identities=23% Similarity=0.473 Sum_probs=31.3
Q ss_pred CcceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeec
Q 021669 11 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 51 (309)
Q Consensus 11 ~~~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~ 51 (309)
+..|.++.+. ..+++|-+.|+++|+||+.++.++.+..-
T Consensus 221 ~~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 221 DSVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CCEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3457766654 67999999999999999999998876544
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.29 E-value=6 Score=38.84 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=32.6
Q ss_pred CccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe
Q 021669 229 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 266 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~ 266 (309)
+.+.+++..++..+++|-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 34566778889999999999999999999999988764
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=81.56 E-value=28 Score=30.89 Aligned_cols=106 Identities=8% Similarity=0.003 Sum_probs=56.8
Q ss_pred ceEEEEeCCCCC-EEEEeeCCCcEEEEEcCCCc---eeeeee-----c----cccceeEEEEecC---CCEEEEEcCCCC
Q 021669 13 RISSMDFHKSSS-YLVTASDDESIRLYDVTAAT---CLKTIN-----S----KKYGVDLVCFTSH---PTTVIYSSKNGW 76 (309)
Q Consensus 13 ~V~~i~~s~~~~-~l~t~s~D~~v~iWd~~~~~---~~~~~~-----~----~~~~v~~~~~~~~---~~~~~~~s~~g~ 76 (309)
.-..|+|.|||+ +|+.+...|.|++++.+... .+..+. + .+.....++|+|+ ...++++.....
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 345899999996 45556688999999754321 111111 1 1334667888875 223333211100
Q ss_pred C----------ceeEEEEccC----------CceEEEee----ecccCEEEEEecCCCCeEEEecCCC
Q 021669 77 D----------ESLRLLSLHD----------NKYLRYFK----GHHDRVVSLSLCSSKDCFISGSLDR 120 (309)
Q Consensus 77 d----------~~i~~~d~~~----------~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~s~Dg 120 (309)
+ ..|.-|.+.. .+.+..+. .| ....|.|.|||++.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECCCCcEEEEeCCCC
Confidence 1 1333344432 12222222 24 357899999999777766433
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.08 E-value=8.1 Score=38.73 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=32.4
Q ss_pred CccceEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe
Q 021669 229 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 266 (309)
Q Consensus 229 ~~~~~~~~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~ 266 (309)
+.+.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34556677789999999999999999999999988764
No 351
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=80.88 E-value=38 Score=31.95 Aligned_cols=234 Identities=10% Similarity=0.047 Sum_probs=107.9
Q ss_pred EEEecCCCEEEEE-cCCCCC-ceeEEEEccCCceEEE-ee-eccc------CEEEEEecCCCCeEEEe----------cC
Q 021669 59 VCFTSHPTTVIYS-SKNGWD-ESLRLLSLHDNKYLRY-FK-GHHD------RVVSLSLCSSKDCFISG----------SL 118 (309)
Q Consensus 59 ~~~~~~~~~~~~~-s~~g~d-~~i~~~d~~~~~~~~~-~~-~h~~------~v~~v~~~~~~~~l~s~----------s~ 118 (309)
.|++|+++.++++ |.+|.| ..++++|+++++.+.. +. .-+. ....++|..+...+++. +.
T Consensus 135 ~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~ 214 (711)
T 4hvt_A 135 SNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLY 214 (711)
T ss_dssp EECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSS
T ss_pred eecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCC
Confidence 3488999987654 444444 5899999999886531 11 0000 00233665333333432 12
Q ss_pred CCcEEEeeCCCceeeeee--eecC--c-eeEEECCCCc------EEEEEEC---CEEEEEECCCCCcCCceEEEeCCCCC
Q 021669 119 DRTVLLWDQRAEKCQGLL--RVQG--R-PAAAYDDQGL------VFAVAFG---GYIRMFDARKYEKGPFDIFSVGGDIS 184 (309)
Q Consensus 119 Dg~v~~Wd~~~~~~~~~~--~~~~--~-~~~~~~~~~~------~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~ 184 (309)
-..|+.|-+-+......+ .... . .......++. ++..+.+ ..+.+.|..... + ....+... .
T Consensus 215 ~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~~-~ 290 (711)
T 4hvt_A 215 PNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKN-L--KLQKINMP-S 290 (711)
T ss_dssp BCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSS-C--EEEECCSC-T
T ss_pred CCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCC-C--cceEeecC-C
Confidence 356888865444322111 1111 1 1122222222 2222212 345555543211 1 11222111 1
Q ss_pred CCeEEEEccCCCEEEEEe----------CCCcEEEEECCCCe-------EeEEeeecCCCCCccceEEECCCCCEEEEEc
Q 021669 185 DANVVKFSNDGRLMLLTT----------MEGHIHVLDSFRGT-------LLSTYNVKPVSRNSTLEASFSPEGMFVISGS 247 (309)
Q Consensus 185 ~~~~v~~s~dg~~l~~~~----------~dg~v~i~d~~~~~-------~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s 247 (309)
+ ..+..+.++.+++... ..+.|...|+.++. ....+ ..+.....+..+.+.++ ..+++..
T Consensus 291 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 291 D-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKIL-FTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp T-CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEE-ECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred c-ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEE-ECCCCCCeEEEEEEECC-EEEEEEE
Confidence 2 2233455666655331 35678888875531 11111 11222334556777765 6777777
Q ss_pred CCC--cEEEEECCCCc-eEEEeecC--CCCCcEEEECCCe-eEEEEccce---EEEeeecC
Q 021669 248 GDG--SVYAWSVRSGK-EVASWMSF--DTEPPVIKWTPGS-LMFVTGSSE---LSFWIPDL 299 (309)
Q Consensus 248 ~Dg--~i~vwd~~~~~-~~~~~~~~--~~~v~~l~~~p~~-~~l~s~~~d---~~~~~~~~ 299 (309)
.++ .++++|+.+++ .+..+... .+.+..+..++++ .++++.++. -.++..++
T Consensus 368 ~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 368 DNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp ETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred ECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 776 46777776664 22321112 2345555666765 344544432 45555444
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.65 E-value=1.3 Score=44.51 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=31.4
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeee
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 50 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~ 50 (309)
.+.++...++..++.|-+.|+++|||++.++.|+.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666788899999999999999999999987743
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=77.68 E-value=28 Score=28.58 Aligned_cols=202 Identities=13% Similarity=0.173 Sum_probs=94.7
Q ss_pred eeEEEEccCCceEE-EeeecccCEEEEEecCCCCeEEEecC----CC-------cEEEeeCCCceeeeeeeecC---cee
Q 021669 79 SLRLLSLHDNKYLR-YFKGHHDRVVSLSLCSSKDCFISGSL----DR-------TVLLWDQRAEKCQGLLRVQG---RPA 143 (309)
Q Consensus 79 ~i~~~d~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~----Dg-------~v~~Wd~~~~~~~~~~~~~~---~~~ 143 (309)
.+..||..+++-.. .+.....+........+++.++.|+. ++ .+..+|+.+.+....-.++. ...
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 47788887776332 11111112222233456778888873 22 16678887766543322211 112
Q ss_pred EEECCCCcEEEEEEC-------CEEEEEECCCCCcCCceEEE-eCCCCCCCeEEEEccCCCEEEEEeC------CCcEEE
Q 021669 144 AAYDDQGLVFAVAFG-------GYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTM------EGHIHV 209 (309)
Q Consensus 144 ~~~~~~~~~~~~~~~-------~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~v~~s~dg~~l~~~~~------dg~v~i 209 (309)
.+......++.++.+ ..+.+||+...+ ..... +........+ ...++++++.|+. -..+.+
T Consensus 105 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~---W~~~~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~ 179 (318)
T 2woz_A 105 LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK---WSEVKNLPIKVYGHNV--ISHNGMIYCLGGKTDDKKCTNRVFI 179 (318)
T ss_dssp EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE---EEEECCCSSCEESCEE--EEETTEEEEECCEESSSCBCCCEEE
T ss_pred eEEECCEEEEEcCccCCCCcccceEEEEeCCCCC---EeECCCCCCcccccEE--EEECCEEEEEcCCCCCCCccceEEE
Confidence 222233344444542 356777765421 11000 0000011112 2257788888764 235889
Q ss_pred EECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCC-----cEEEEECCCCce--EEEeecCCCCCcEEEECCCe
Q 021669 210 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-----SVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGS 282 (309)
Q Consensus 210 ~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg-----~i~vwd~~~~~~--~~~~~~~~~~v~~l~~~p~~ 282 (309)
||+.+.+-...-.. +..... ..++. -+++.++.||.++ .+.+||+.+.+- +..++...... +++ .-++
T Consensus 180 yd~~~~~W~~~~~~-p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~ 254 (318)
T 2woz_A 180 YNPKKGDWKDLAPM-KTPRSM-FGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SLV-SLAG 254 (318)
T ss_dssp EETTTTEEEEECCC-SSCCBS-CEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EEE-EETT
T ss_pred EcCCCCEEEECCCC-CCCccc-ceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EEE-EECC
Confidence 99887654332111 111111 12222 3677778877543 577899877543 22222111111 222 2356
Q ss_pred eEEEEccc
Q 021669 283 LMFVTGSS 290 (309)
Q Consensus 283 ~~l~s~~~ 290 (309)
++++.|+.
T Consensus 255 ~i~v~GG~ 262 (318)
T 2woz_A 255 SLYAIGGF 262 (318)
T ss_dssp EEEEECCB
T ss_pred EEEEECCe
Confidence 77777764
No 354
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=74.85 E-value=57 Score=30.74 Aligned_cols=240 Identities=15% Similarity=0.172 Sum_probs=116.4
Q ss_pred ceEEEE-eCCCCCEEEEe-----eCCCcEEEEEcCCCceee-eee-cccc------ceeEEEEecCCCEEEEEc------
Q 021669 13 RISSMD-FHKSSSYLVTA-----SDDESIRLYDVTAATCLK-TIN-SKKY------GVDLVCFTSHPTTVIYSS------ 72 (309)
Q Consensus 13 ~V~~i~-~s~~~~~l~t~-----s~D~~v~iWd~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~~~~~s------ 72 (309)
....+. ++|+++++|-+ +.-.++|++|+.+++.+. .|. ..+. ....++|. +.+.++++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTC
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCC
Confidence 344566 89999886442 233478999999987663 222 1011 11334665 444454432
Q ss_pred --CCCCCceeEEEEccCC--ceEEEeeecccCE-EEEEecCCCC-----eEEEecCC---CcEEEeeCCC--ceeeeeee
Q 021669 73 --KNGWDESLRLLSLHDN--KYLRYFKGHHDRV-VSLSLCSSKD-----CFISGSLD---RTVLLWDQRA--EKCQGLLR 137 (309)
Q Consensus 73 --~~g~d~~i~~~d~~~~--~~~~~~~~h~~~v-~~v~~~~~~~-----~l~s~s~D---g~v~~Wd~~~--~~~~~~~~ 137 (309)
..++...++.|-+-+. +-...+.+-...+ .+...+++++ .+++.+.| ..+.+.|... +... .+.
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECC
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-Eee
Confidence 1234567888887654 2345565544443 3344556665 35655423 3344445442 2211 222
Q ss_pred ecCceeEEECCCCcEEE-E----------EECCEEEEEECCCCCc-----CCceE-EEeCCCCCCCeEEEEccCCCEEEE
Q 021669 138 VQGRPAAAYDDQGLVFA-V----------AFGGYIRMFDARKYEK-----GPFDI-FSVGGDISDANVVKFSNDGRLMLL 200 (309)
Q Consensus 138 ~~~~~~~~~~~~~~~~~-~----------~~~~~i~~~d~~~~~~-----~~~~~-~~~~~~~~~~~~v~~s~dg~~l~~ 200 (309)
.+..........+.++. + .-.+.|...|+..... ..... +.. .....+..+.+..+ .++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 288 MPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTP-TANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp SCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECC-CTTEEEEEEEECSS-CEEEE
T ss_pred cCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECC-CCCCeEEEEEEECC-EEEEE
Confidence 22222211112222222 1 1245677777765321 11221 221 12223455666654 56666
Q ss_pred EeCCC--cEEEEECCCCe-EeEE-eeecCCCCCccceEEECCCCC-EEEEEcCC---CcEEEEECC
Q 021669 201 TTMEG--HIHVLDSFRGT-LLST-YNVKPVSRNSTLEASFSPEGM-FVISGSGD---GSVYAWSVR 258 (309)
Q Consensus 201 ~~~dg--~v~i~d~~~~~-~~~~-~~~~~~~~~~~~~~~~sp~g~-~l~s~s~D---g~i~vwd~~ 258 (309)
...++ .+.++|+.++. .... ..... ...+....+++++. ++++.+.. +.++.+|+.
T Consensus 366 ~~~~~~~~l~~~~~~~g~~~~~~~i~lp~--~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 366 TYDNVVAKVVTFTLENEQWTKPVVLKLPY--QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEETTEEEEEEECEETTEECCCEEECCCS--TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEECCEEEEEEEECCCCceEEEeccCCCC--CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 66666 46677766564 1222 22211 12343445567664 44444332 578888876
No 355
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=72.61 E-value=63 Score=30.25 Aligned_cols=150 Identities=12% Similarity=0.109 Sum_probs=76.8
Q ss_pred CCCCeEEEecCC----CcEEEeeCCCceeeeee-e-----ec----CceeEEECCCCc-EEEEEEC------CEEEEEEC
Q 021669 108 SSKDCFISGSLD----RTVLLWDQRAEKCQGLL-R-----VQ----GRPAAAYDDQGL-VFAVAFG------GYIRMFDA 166 (309)
Q Consensus 108 ~~~~~l~s~s~D----g~v~~Wd~~~~~~~~~~-~-----~~----~~~~~~~~~~~~-~~~~~~~------~~i~~~d~ 166 (309)
.+++.++.||.+ ..+.++|+.+++....- . ++ .+..+....++. ++.++.+ +.+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777754 35778888776544322 1 11 122233321333 3333332 34667776
Q ss_pred CCCCcCCceEE-EeCCCCCCCeEEEEccCCCEEEEEeCCC--cEEEEECCCCeEeEEeee--cCCCCCccceEEECCC-C
Q 021669 167 RKYEKGPFDIF-SVGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLLSTYNV--KPVSRNSTLEASFSPE-G 240 (309)
Q Consensus 167 ~~~~~~~~~~~-~~~~~~~~~~~v~~s~dg~~l~~~~~dg--~v~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~sp~-g 240 (309)
.+.+ .... ........ .+.+.-.++++++.|+.++ .+.+||..+..-...-.. .+........+.+..+ +
T Consensus 476 ~t~~---W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 476 KTRE---WSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp TTTE---EEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred CCCc---EEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 5421 0000 00000111 2233324889999888655 689999887654322110 1111112223556655 7
Q ss_pred CEEEEEcCC-------CcEEEEECCCCc
Q 021669 241 MFVISGSGD-------GSVYAWSVRSGK 261 (309)
Q Consensus 241 ~~l~s~s~D-------g~i~vwd~~~~~ 261 (309)
+.++.||.+ ..+.+||+.+.+
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 777888762 358899998765
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=63.27 E-value=60 Score=26.41 Aligned_cols=201 Identities=10% Similarity=0.031 Sum_probs=87.8
Q ss_pred CceeEEEEccCCceEEEeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCCc-eeeeeeeecCceeEEECCCCcEEEE
Q 021669 77 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQGRPAAAYDDQGLVFAV 155 (309)
Q Consensus 77 d~~i~~~d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (309)
|+.+..|-.....++..-..-...|..++...+. .++- . ||.+..|-.... ++-..............-....++.
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al 117 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYAL 117 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEE
Confidence 5567777654322111111123356666654333 2233 4 899999964321 1110111111111122223445566
Q ss_pred EECCEEEEEECCCCCcCCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEE
Q 021669 156 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 235 (309)
Q Consensus 156 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
. ++.+..|=....- .+..... ....+..++...+. .+.-. ||.|+.|-.....++. ........+..++
T Consensus 118 ~-~G~v~~wG~n~~g--qlg~~~~--~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg---~p~~~~~~v~~i~ 186 (282)
T 3qhy_B 118 K-DGKVIAWGDDSDG--QTTVPAE--AQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTT---VPAEAQSGVDDVA 186 (282)
T ss_dssp E-TTEEEEEECCTTS--TTSCCGG--GGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEE
T ss_pred e-CCeEEEecCCCCC--cCCCCcc--CCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCC---CceecCCCeEEEE
Confidence 6 8989888543211 1111000 11234444433322 22223 7888888654322111 0001112344454
Q ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEccceEEEe
Q 021669 236 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFW 295 (309)
Q Consensus 236 ~sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~~~d~~~~ 295 (309)
-..+ +.+.- .||.++.|-....-.+.........|..|+-..+-..+++ ...+..|
T Consensus 187 ~G~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~w 242 (282)
T 3qhy_B 187 GGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAW 242 (282)
T ss_dssp ECSS--EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEE
T ss_pred ecCC--EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEe
Confidence 4433 33333 5999999987543222111111234666665555555555 3334444
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=61.59 E-value=33 Score=31.59 Aligned_cols=58 Identities=24% Similarity=0.352 Sum_probs=38.3
Q ss_pred eEEEEccCCCEEEEEeCC------------CcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEE
Q 021669 187 NVVKFSNDGRLMLLTTME------------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 246 (309)
Q Consensus 187 ~~v~~s~dg~~l~~~~~d------------g~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~ 246 (309)
--|+|+|.|.+++.-..+ ..+.+.+..++++..-+. .+ ....+..++|+||++.|...
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CC-TTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CC-CCccCcCeeECCCCCEEEEE
Confidence 458999999977665432 235555666676554333 22 23467788999999888765
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=60.94 E-value=8.3 Score=36.32 Aligned_cols=31 Identities=10% Similarity=0.131 Sum_probs=26.7
Q ss_pred CCCCCEEEEEcCCCcEEEEECCCCceEEEee
Q 021669 237 SPEGMFVISGSGDGSVYAWSVRSGKEVASWM 267 (309)
Q Consensus 237 sp~g~~l~s~s~Dg~i~vwd~~~~~~~~~~~ 267 (309)
.++.+++++-+.|.++|+|++.+++++.+..
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4467899999999999999999999877653
No 359
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=60.79 E-value=70 Score=26.36 Aligned_cols=98 Identities=6% Similarity=0.056 Sum_probs=53.0
Q ss_pred EEEccCCCEEEEEeC-CCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCC--CcEEEEECCCCceEEE
Q 021669 189 VKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD--GSVYAWSVRSGKEVAS 265 (309)
Q Consensus 189 v~~s~dg~~l~~~~~-dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~D--g~i~vwd~~~~~~~~~ 265 (309)
..++|+|+.|...+. ..+|++.++..+.....+. ... ...+.|++++|+=...+ ..|..-++..... ..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~------~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~ 221 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD------CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VV 221 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC------SCE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EE
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC------CCc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EE
Confidence 346889998887765 6788888876655432221 111 13456998888765443 3566666654432 22
Q ss_pred eecCCCCCcEEEECCCeeEEEE--ccceEEEeeec
Q 021669 266 WMSFDTEPPVIKWTPGSLMFVT--GSSELSFWIPD 298 (309)
Q Consensus 266 ~~~~~~~v~~l~~~p~~~~l~s--~~~d~~~~~~~ 298 (309)
+.. ..+ ..|+|++..|.- .+....|+..+
T Consensus 222 Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~ 252 (302)
T 3s25_A 222 LTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVK 252 (302)
T ss_dssp CSC--SCE--EEEEEETTEEEEEECSSSCEEEEEE
T ss_pred EeC--CCc--ceEEECCCEEEEEECCCCcEEEEEE
Confidence 221 222 336666654432 22234555443
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=59.64 E-value=50 Score=30.29 Aligned_cols=61 Identities=23% Similarity=0.322 Sum_probs=40.5
Q ss_pred CCCeEEEEccCCCEEEEEeC------------CCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEE
Q 021669 184 SDANVVKFSNDGRLMLLTTM------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 246 (309)
Q Consensus 184 ~~~~~v~~s~dg~~l~~~~~------------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~ 246 (309)
.....++|+++|.+.+.... ...|..++..++++..-+.. + ....+..++|+||+++|..+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-P-~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-P-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-C-TTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-C-CCccccCCEECCCCCEEEEE
Confidence 34567899999998774322 22577777777776543321 1 12345779999999988776
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=57.62 E-value=76 Score=25.77 Aligned_cols=246 Identities=11% Similarity=0.056 Sum_probs=106.9
Q ss_pred ceEEEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEE
Q 021669 13 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 92 (309)
Q Consensus 13 ~V~~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~ 92 (309)
.|..|+.......++ . |+.|..|-....-++-........+..++..... .++. . |+.+..|-.....++.
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~----~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K----DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E----TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E----CCEEEEeeCCCCCCCC
Confidence 566776655433333 4 8999999654322221111111234444433221 1222 1 5677777654321111
Q ss_pred EeeecccCEEEEEecCCCCeEEEecCCCcEEEeeCCC-ceeeeeeeecCceeEEECCCCcEEEEEECCEEEEEECCCCCc
Q 021669 93 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEK 171 (309)
Q Consensus 93 ~~~~h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 171 (309)
.-..-...|..++...+. .+.-. ||.|..|-... +++-...................++.. ++.+..|=....-
T Consensus 96 ~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~g- 170 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFG- 170 (282)
T ss_dssp CCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTS-
T ss_pred CCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCC-
Confidence 111113467777655433 33334 99999996432 111100000111111111223344444 7888888543211
Q ss_pred CCceEEEeCCCCCCCeEEEEccCCCEEEEEeCCCcEEEEECCCCeEeEEeeecCCCCCccceEEECCCCCEEEEEcCCCc
Q 021669 172 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 251 (309)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~s~s~Dg~ 251 (309)
.+.+... ....+..++...+... +- .||.|+.|=.....++.. .......+..++-..+...+++ ||.
T Consensus 171 -qlg~p~~--~~~~v~~i~~G~~hs~--al-~~G~v~~wG~n~~gqlg~---p~~~~~~v~~i~~G~~h~~al~---~g~ 238 (282)
T 3qhy_B 171 -QTTVPAE--AQSGVDDVAGGIFHSL--AL-KDGKVIAWGDNRYKQTTV---PTEALSGVSAIASGEWYSLALK---NGK 238 (282)
T ss_dssp -TTSCCGG--GGSSEEEEEECSSEEE--EE-ETTEEEEEECCTTSTTCC---CGGGGSSCCEEEECSSCEEEEE---TTE
T ss_pred -CCCCcee--cCCCeEEEEecCCEEE--EE-ECCeEEEEECCCCCCCCC---CcccCCCceEEEcCCCEEEEEE---CCE
Confidence 1110000 0123444444333322 22 588888886433221110 0001123555655444333333 899
Q ss_pred EEEEECCCCceEEEeecCCCCCcEEEECCCeeEEEEc
Q 021669 252 VYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 252 i~vwd~~~~~~~~~~~~~~~~v~~l~~~p~~~~l~s~ 288 (309)
++.|-.....++. ....|..|+-.+.-...++.
T Consensus 239 v~~wG~n~~gq~~----v~~~v~~iaaG~~h~~al~~ 271 (282)
T 3qhy_B 239 VIAWGSSRTAPSS----VQSGVSSIEAGPNAAYALKG 271 (282)
T ss_dssp EEEESTTCCCCGG----GSSCEEEEEECSSCEEEEEC
T ss_pred EEEecCCCCcccc----CCCCcEEEEECcCeEEEEec
Confidence 9999876543322 12344455544444444433
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=43.84 E-value=1.1e+02 Score=28.21 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=40.2
Q ss_pred eEEEEecCCCEEEEEcCCC---------CCceeEEEEccCCceEEEeeecc-cCEEEEEecCCCCeEEEe
Q 021669 57 DLVCFTSHPTTVIYSSKNG---------WDESLRLLSLHDNKYLRYFKGHH-DRVVSLSLCSSKDCFISG 116 (309)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~g---------~d~~i~~~d~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~ 116 (309)
-.++|++.+..++.--.+. ....+.+.+..+++..+.+.++. .+++.++|+||++.|...
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4688999887544432110 12345566777788777777765 579999999998866544
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=38.49 E-value=87 Score=28.69 Aligned_cols=55 Identities=15% Similarity=0.189 Sum_probs=35.9
Q ss_pred cceEEECCCCCEEEEEcC------------CCcEEEEECCCCceEEEeec-CCCCCcEEEECCCeeEE
Q 021669 231 TLEASFSPEGMFVISGSG------------DGSVYAWSVRSGKEVASWMS-FDTEPPVIKWTPGSLMF 285 (309)
Q Consensus 231 ~~~~~~sp~g~~l~s~s~------------Dg~i~vwd~~~~~~~~~~~~-~~~~v~~l~~~p~~~~l 285 (309)
.-.+.|.++|...+.-.. ...+..++..+++...-+.. ..++++.++|+||++.|
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktL 545 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTL 545 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEE
Confidence 446899999988873321 12566667766764433332 23568999999998654
No 364
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=33.85 E-value=1.2e+02 Score=20.97 Aligned_cols=45 Identities=11% Similarity=-0.021 Sum_probs=25.0
Q ss_pred EEEEEcCCCcEEEEECCCCceEEE-eecCCCCCcEEEECCCeeEEEE
Q 021669 242 FVISGSGDGSVYAWSVRSGKEVAS-WMSFDTEPPVIKWTPGSLMFVT 287 (309)
Q Consensus 242 ~l~s~s~Dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~~p~~~~l~s 287 (309)
..+.-..||.+.++|- .++.+-. +.........+.+.++|.+++.
T Consensus 63 ~~l~l~~dGNLVl~d~-~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~ 108 (119)
T 1b2p_A 63 CRAVLQPDGVLVVITN-ENVTVWQSPVAGKAGHYVLVLQPDRNVVIY 108 (119)
T ss_dssp CEEEECTTSCEEEECT-TCCEEEECSCCCCSSCEEEEECTTSCEEEE
T ss_pred eEEEEccCCEEEEEeC-CCcEEEcCCCCCCCCCEEEEEECCCcEEEE
Confidence 4566667888888874 3333322 2111122446777788875554
No 365
>3izo_F Fiber; pentameric penton base, trimeri viral protein; 3.60A {Human adenovirus 5}
Probab=31.18 E-value=2.1e+02 Score=26.08 Aligned_cols=105 Identities=12% Similarity=0.227 Sum_probs=59.0
Q ss_pred EEEeCCCCCEEEEeeCCCcEEEEEcCCCceeeeeeccccceeEEEEecCCCEEEEEcCCCCCceeEEEEccCCceEEEee
Q 021669 16 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 95 (309)
Q Consensus 16 ~i~~s~~~~~l~t~s~D~~v~iWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~i~~~d~~~~~~~~~~~ 95 (309)
.+.|+..|.+.++-..+...-+|...+...-..+......-..+|....+..++. +|.+.-+. |... .+.
T Consensus 380 gL~f~s~G~i~~~~~~~~~~TLWTtpdPspNc~i~~~~D~KltL~LtK~Gs~Vlg--------tvsl~~v~-g~~~-~i~ 449 (581)
T 3izo_F 380 GLSFDSTGAITVGNKNNDKLTLWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILA--------TVSVLAVK-GSLA-PIS 449 (581)
T ss_pred ceeecCCCcEEecCCCCCCccccCCCCCCCCeEEecCCCcEEEEEEEecCCEEEE--------EEEEEEec-cceE-ecC
Confidence 4677777877776666667889976544444455555444455677776665542 23333222 2221 111
Q ss_pred e-cccCEEEEEecCCCCeEEEecCCCcEEEeeCCCcee
Q 021669 96 G-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 132 (309)
Q Consensus 96 ~-h~~~v~~v~~~~~~~~l~s~s~Dg~v~~Wd~~~~~~ 132 (309)
. +..--..+.|..+|..+-+++.++. .|.+|.+..
T Consensus 450 ~t~~~~~i~L~FD~~G~Ll~~s~l~~~--~W~~r~~~s 485 (581)
T 3izo_F 450 GTVQSAHLIIRFDENGVLLNNSFLDPE--YWNFRNGDL 485 (581)
T ss_pred CCcccEEEEEEECCCCCCCcCCCCCcc--cccccCCCc
Confidence 1 1222344667777876555555654 898887653
No 366
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=29.47 E-value=1.3e+02 Score=20.16 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=23.2
Q ss_pred EEEcCCCcEEEEECCCCceEEEeecC-CCCCcEEEECCCeeEEEEc
Q 021669 244 ISGSGDGSVYAWSVRSGKEVASWMSF-DTEPPVIKWTPGSLMFVTG 288 (309)
Q Consensus 244 ~s~s~Dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~~p~~~~l~s~ 288 (309)
+.-..||.+.++|-. ++.+-.-... ......+...++|.+++.+
T Consensus 55 L~l~~dGnLvL~d~~-~~~vWss~t~~~~~~~~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 55 AVLQSDGNFVVYDSS-GRSLWASHSTRGSGNYILILQDDGNVIIYG 99 (105)
T ss_dssp EEECTTSCEEEECTT-CCEEEECCCCCCSSCEEEEECTTSCEEEEE
T ss_pred EEEeCCccEEEECCC-cEEEEEecCCCCCCCEEEEEeCCCeEEEEC
Confidence 444567777777753 3333222111 1223345667777777654
No 367
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=21.53 E-value=2.8e+02 Score=25.07 Aligned_cols=58 Identities=12% Similarity=0.149 Sum_probs=36.1
Q ss_pred CEEEEEeCCCcEEEEECCCC----eEeEEeeecCCCCCccc-eEEECCCCCEEEEEcCCCcEEE
Q 021669 196 RLMLLTTMEGHIHVLDSFRG----TLLSTYNVKPVSRNSTL-EASFSPEGMFVISGSGDGSVYA 254 (309)
Q Consensus 196 ~~l~~~~~dg~v~i~d~~~~----~~~~~~~~~~~~~~~~~-~~~~sp~g~~l~s~s~Dg~i~v 254 (309)
..+..|+.+|+|+-.-+... ..+.++.... ...+|. .+.+++++++|+.++.++.++|
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-CCCccccceEEccCCCeEEEEecccccee
Confidence 44567888887765433221 2333443322 134564 7899999999999988775555
Done!