Query 021671
Match_columns 309
No_of_seqs 272 out of 1841
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 07:35:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021671.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021671hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iuqa_ c.112.1.1 (A:) Glycero 99.7 1.3E-18 9.4E-23 164.2 10.1 199 3-213 129-355 (367)
2 d1rzhh2 f.23.10.1 (H:11-35) Ph 49.1 11 0.0008 20.1 3.4 20 224-245 3-22 (26)
3 d1ozha1 c.31.1.3 (A:188-366) C 30.7 31 0.0023 26.3 5.1 48 67-117 6-53 (179)
4 d1yx1a1 c.1.15.7 (A:3-252) Hyp 26.5 37 0.0027 27.0 5.0 118 69-191 80-211 (250)
5 d2djia1 c.31.1.3 (A:187-363) P 24.1 41 0.003 25.5 4.6 46 66-116 6-51 (177)
6 d1ybha1 c.31.1.3 (A:281-459) A 22.4 69 0.005 24.2 5.7 46 66-116 4-49 (179)
7 d1zpda1 c.31.1.3 (A:188-362) P 21.1 56 0.0041 24.6 4.9 45 69-116 10-54 (175)
8 d1q6za1 c.31.1.3 (A:182-341) B 21.0 37 0.0027 25.1 3.6 48 66-116 4-51 (160)
9 d2ji7a1 c.31.1.3 (A:195-369) O 19.1 46 0.0033 25.1 3.9 47 67-116 5-51 (175)
10 d2ez9a1 c.31.1.3 (A:183-365) P 17.9 65 0.0047 24.6 4.6 47 65-116 14-60 (183)
No 1
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}
Probab=99.75 E-value=1.3e-18 Score=164.25 Aligned_cols=199 Identities=10% Similarity=0.016 Sum_probs=120.1
Q ss_pred CceEEEEeCCCCcchHHHHHHHHhhcC--CCCceEEEEchhhcccchHHHHHHhcCcEEEecCCc-------------cC
Q 021671 3 KEHALVICNHRSDIDWLVGWVVAQRKG--CLGSTLAIIKKEAKHLPFIGWSMWFSEYVFLERRWN-------------KD 67 (309)
Q Consensus 3 ke~~lii~NH~S~~D~lvl~~l~~r~g--~lg~~kfv~K~el~~~PviGw~~~~~~~ifv~R~~~-------------~D 67 (309)
.+++|++|||+|++|+.+++.++.+.+ ...++.|++|+++...|++||.+...+.++|.|+.. .+
T Consensus 129 g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~~ 208 (367)
T d1iuqa_ 129 GHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKAN 208 (367)
T ss_dssp TCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHH
T ss_pred CCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEeccccccccccccchhhhhh
Confidence 468999999999999999998887654 124689999999999999999999999999988642 13
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCCceeccCCCcchhhhHhhccCCCcceeeeeee
Q 021671 68 EQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPRNVLIPRTKGFVSAVNNMRSFVPAIYDCTVA 147 (309)
Q Consensus 68 ~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l~~vL~PRtkGf~~~l~~lr~~~~aVyDvTi~ 147 (309)
...++...+.|++.+ .++.|||||||..++... -..++.-..|+..|....+....+....||++++.
T Consensus 209 ~~al~~~~~lL~~Gg--~~v~IfPEGTRsr~~~~d----------g~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~ 276 (367)
T d1iuqa_ 209 TRSLKEMALLLRGGS--QLIWIAPSGGRDRPDPST----------GEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL 276 (367)
T ss_dssp HHHHHHHHHHHHHCC--CEEEECTTCSCCCBCTTT----------CCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred hHHHHHHHHHhhcCC--eEEEEeccCcccCccccc----------ccccccccCccchHHHHHHHhcCCCCceEechhhh
Confidence 456777788887754 347799999998543100 00111111112212111121111211247888887
Q ss_pred cCCCCCCcc-hhhhccc----CceEEEEEEE-eeeCCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 021671 148 VPKSQPPPT-MVRMFRG----QPSVVNVEIR-RHSMEE-------LPKTADGIAQWCKDVFVTKDALLEKYLSRDTFGL 213 (309)
Q Consensus 148 y~~~~~~pt-l~~~l~g----~p~~v~v~vr-ripi~~-------iP~~~~~~~~WL~~~~~eKD~ll~~~~~~g~Fp~ 213 (309)
+.+..+.|. ...-+.. ....|.|.+- .+++++ .++.++...+|+++.++++...|++....+.=++
T Consensus 277 ~~d~~pP~~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l~d~v~eq~~~Lk~ai~gk~~~~ 355 (367)
T d1iuqa_ 277 CHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLG 355 (367)
T ss_dssp CGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCGGG
T ss_pred cccccCCCcccccchhhccccCCCceeEEeCCCcchhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 544322121 1111111 1122333331 122221 1233456789999999999999999887655433
No 2
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=49.10 E-value=11 Score=20.09 Aligned_cols=20 Identities=30% Similarity=0.356 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 021671 224 KSLFVVVSWSCLLIFILVKLFQ 245 (309)
Q Consensus 224 ~~l~~~~~W~~~~~~~~~~~~~ 245 (309)
.++..++||.+..+ +.+|++
T Consensus 3 aslaiw~fw~ffal--li~ylq 22 (26)
T d1rzhh2 3 ASLAIYSFWIFLAG--LIYYLQ 22 (26)
T ss_dssp HHHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHh
Confidence 35677788865422 345544
No 3
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=30.70 E-value=31 Score=26.32 Aligned_cols=48 Identities=10% Similarity=0.071 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCCc
Q 021671 67 DEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPR 117 (309)
Q Consensus 67 D~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l~ 117 (309)
|.+.+.+..+.|.+..+| +++.=-|.+. .+......++|++.|+|++.
T Consensus 6 ~~~~i~~~~~~L~~AkrP--vii~G~g~~~-~~a~~~l~~lae~~giPv~t 53 (179)
T d1ozha1 6 PDDAIDQVAKLIAQAKNP--IFLLGLMASQ-PENSKALRRLLETSHIPVTS 53 (179)
T ss_dssp CHHHHHHHHHHHHHCSSE--EEEECGGGGS-GGGHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhCCCE--EEEEchhhCh-hhHHHHHHHHHHhccceEEe
Confidence 456789999999998888 7777777754 45567789999999999863
No 4
>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.53 E-value=37 Score=26.95 Aligned_cols=118 Identities=13% Similarity=0.045 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCCceeccCCCcc-h----hhh---HhhccCCCcc
Q 021671 69 QTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPRNVLIPRTKG-F----VSA---VNNMRSFVPA 140 (309)
Q Consensus 69 ~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l~~vL~PRtkG-f----~~~---l~~lr~~~~a 140 (309)
+.+++.++..++-|-+ .+.++-|.....+..+...+.|++.|+...-+. .|.+.+ . ... ++.-.+.+..
T Consensus 80 ~~~~~~i~~A~~LG~~--~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~iE~-h~~~~~~~~~~~~~~~~~~~~~~p~vg~ 156 (250)
T d1yx1a1 80 PELEPTLRRAEACGAG--WLKVSLGLLPEQPDLAALGRRLARHGLQLLVEN-DQTPQGGRIEVLERFFRLAERQQLDLAM 156 (250)
T ss_dssp TTHHHHHHHHHHTTCS--EEEEEEECCCSSCCHHHHHHHHTTSSCEEEEEC-CSSHHHHCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHhCCC--EEEEeecccchhHHHHHHHHHHHHcCCEEEEEe-CCCcccCCHHHHHHHHHHhhccCCcccc
Confidence 3455555555555555 445555555555556777788888888653332 222111 1 111 1111234556
Q ss_pred eeeeeeecCCCCCCcchhhhcccCceEEEEEEEeeeCCC------CCCCHHHHHHHH
Q 021671 141 IYDCTVAVPKSQPPPTMVRMFRGQPSVVNVEIRRHSMEE------LPKTADGIAQWC 191 (309)
Q Consensus 141 VyDvTi~y~~~~~~ptl~~~l~g~p~~v~v~vrripi~~------iP~~~~~~~~WL 191 (309)
.+|+.-.+..++........+ .+...|+|++-.+-.. +.+.+-+..+|+
T Consensus 157 ~~D~~h~~~~g~dp~~~~~~~--~~~i~~vHvkD~~~~~~~~~~~~g~G~~d~~~~~ 211 (250)
T d1yx1a1 157 TFDIGNWRWQEQAADEAALRL--GRYVGYVHCKAVIRNRDGKLVAVPPSAADLQYWQ 211 (250)
T ss_dssp EEETTGGGGGTCCHHHHHHHH--GGGEEEEEECEEEECTTSCEEEECCCHHHHHHHH
T ss_pred ccchHHHHHcCCcHHHHHHHh--cCCEEEEEeccccCCCCCceecCCCCCCCHHHHH
Confidence 677655443333222222323 3677899987764322 234445555554
No 5
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=24.11 E-value=41 Score=25.47 Aligned_cols=46 Identities=22% Similarity=0.095 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCC
Q 021671 66 KDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIP 116 (309)
Q Consensus 66 ~D~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l 116 (309)
.|.+.+.+..+.|.+...| ++|.=-|.+.. .....+||++.|+|++
T Consensus 6 P~~~~i~~~~~~l~~Ak~P--vii~G~g~~~a---~~~l~~lae~l~~Pv~ 51 (177)
T d2djia1 6 PAAQDIDAAVELLNNSKRP--VIYAGIGTMGH---GPAVQELARKIKAPVI 51 (177)
T ss_dssp CCHHHHHHHHHHHHTCSSE--EEEECGGGTTC---HHHHHHHHHHHTCCEE
T ss_pred cCHHHHHHHHHHHHhCCCE--EEEECcChhhH---HHHHHHhhhccceEEE
Confidence 4778899999999998888 66665555533 3568899999999975
No 6
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=22.44 E-value=69 Score=24.15 Aligned_cols=46 Identities=11% Similarity=0.174 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCC
Q 021671 66 KDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIP 116 (309)
Q Consensus 66 ~D~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l 116 (309)
.|.+.+++..+.|++..+| +++.=-|.+.. .+...+||++.|+|++
T Consensus 4 P~~~~i~~~~~~L~~AkrP--vii~G~G~~~a---~~~l~~lae~~~~Pv~ 49 (179)
T d1ybha1 4 PEDSHLEQIVRLISESKKP--VLYVGGGCLNS---SDELGRFVELTGIPVA 49 (179)
T ss_dssp CCHHHHHHHHHHHHHCSSE--EEEECGGGTTC---HHHHHHHHHHHCCCEE
T ss_pred cCHHHHHHHHHHHHhCCCe--EEEECHHHHHH---HHHHHHHHhhhcccce
Confidence 4778899999999999888 66665565432 3567899999999974
No 7
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
Probab=21.08 E-value=56 Score=24.61 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCC
Q 021671 69 QTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIP 116 (309)
Q Consensus 69 ~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l 116 (309)
..+.+.++.|.+..+| ++|-=.|.+.. +..+...+||++.|+|+.
T Consensus 10 ~~v~~~~~~l~~AkrP--vIi~G~g~~~~-~a~~~l~~lae~~~~Pv~ 54 (175)
T d1zpda1 10 AAVDETLKFIANRDKV--AVLVGSKLRAA-GAEEAAVKFTDALGGAVA 54 (175)
T ss_dssp HHHHHHHHHHTTCSCE--EEEECTTTTTT-TCHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHcCCCE--EEEECcCcccc-chHHHHHHHHHhhceeEE
Confidence 4455566677777777 66666666543 456778899999999985
No 8
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Probab=20.97 E-value=37 Score=25.09 Aligned_cols=48 Identities=15% Similarity=-0.006 Sum_probs=37.1
Q ss_pred cCHHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCC
Q 021671 66 KDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIP 116 (309)
Q Consensus 66 ~D~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l 116 (309)
-|.+.+++.++.|.+..+| ++|.=.|-+.. +......++|++.|+|++
T Consensus 4 ~~~~~ld~~~~~l~~A~rP--vii~G~g~~~~-~~~~~l~~lae~l~~pv~ 51 (160)
T d1q6za1 4 LNDQDLDILVKALNSASNP--AIVLGPDVDAA-NANADCVMLAERLKAPVW 51 (160)
T ss_dssp CCHHHHHHHHHHHHHCSSC--EEEECHHHHHT-TCHHHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHhCCCE--EEEECcCcccc-ccchHHHHHHHhcCceEE
Confidence 4678899999999998888 66666665543 446788999999999863
No 9
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=19.06 E-value=46 Score=25.13 Aligned_cols=47 Identities=11% Similarity=0.186 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCC
Q 021671 67 DEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIP 116 (309)
Q Consensus 67 D~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l 116 (309)
|.+.+.+..+.|.+..+| ++|.=-|.+. .+......++|++.|+|++
T Consensus 5 ~~~~l~~a~~~L~~A~rP--vii~G~g~~~-~~a~~~l~~lae~~~iPv~ 51 (175)
T d2ji7a1 5 AEDAIARAADLIKNAKRP--VIMLGKGAAY-AQCDDEIRALVEETGIPFL 51 (175)
T ss_dssp CHHHHHHHHHHHHTCSSC--EEEECHHHHH-TTCHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHhCCCE--EEEECCCccc-cccHHHHHHHhhhceeeee
Confidence 678899999999999888 6665445443 3445678899999999974
No 10
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=17.90 E-value=65 Score=24.57 Aligned_cols=47 Identities=19% Similarity=0.202 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCC
Q 021671 65 NKDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIP 116 (309)
Q Consensus 65 ~~D~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l 116 (309)
+.|.+.+.+..+.|.+..+| ++|.=.|.+- ......+||++.|+|++
T Consensus 14 ~pd~~~i~~~~~~L~~A~rP--vii~G~G~~~---a~~~l~~lae~~~~Pv~ 60 (183)
T d2ez9a1 14 EPDVQAVTRLTQTLLAAERP--LIYYGIGARK---AGKELEQLSKTLKIPLM 60 (183)
T ss_dssp BCCHHHHHHHHHHHHHCSSE--EEEECGGGTT---CHHHHHHHHHHHTCCEE
T ss_pred CCCHHHHHHHHHHHHhCCCe--EEEEcCCccc---chHHHHHHhhccceEEE
Confidence 35788999999999998888 6666666543 23557899999999985
Done!