BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021673
(309 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/344 (70%), Positives = 277/344 (80%), Gaps = 36/344 (10%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMA---RNRPAARAGAPSFLIRTAMRISRA 57
MNTRY FP DSLCNS +V +SS PA EDRMA RNR ++RA SFLIRTAMRISRA
Sbjct: 1 MNTRYFFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNR-SSRAPPSSFLIRTAMRISRA 59
Query: 58 ---------------------------STWMTLELLALLVQISIITFTLSISKKESPIWP 90
STWM LE +AL+VQI +ITFTLS+SK E P+WP
Sbjct: 60 RWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVITFTLSVSKAERPVWP 119
Query: 91 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS 150
MRIWIVGYD GC+LSLLLLY RY++ Y++Q DGFSLPD+EQQR++E+SR SHLMNKCRTS
Sbjct: 120 MRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTS 179
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 210
LELFFAIWFVMGNVWVFDSRFGSF RAP LHVLCI+LLAWNA+SYSFPFLLF+LLCCCVP
Sbjct: 180 LELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVP 239
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----EDPECCI 265
L+S++LGYNMNMG+ DKGASDDQISRLPSWR+K ++NL+ N A +N E PECCI
Sbjct: 240 LVSNLLGYNMNMGSVDKGASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCI 299
Query: 266 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
CLAKY+EKEEVR+LPCSHMFHLKCVDQWLRI+SCCPLCKQE+ER
Sbjct: 300 CLAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQEIER 343
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/344 (70%), Positives = 277/344 (80%), Gaps = 36/344 (10%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMA---RNRPAARAGAPSFLIRTAMRISRA 57
MNTRY FP DSLCNS +V +SS PA EDRMA RNR ++RA SFLIRTAMRISRA
Sbjct: 1 MNTRYFFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNR-SSRAPPSSFLIRTAMRISRA 59
Query: 58 ---------------------------STWMTLELLALLVQISIITFTLSISKKESPIWP 90
+TWM LE +AL+VQI +ITFTLS+SK E P+WP
Sbjct: 60 RWFSFLRRVFHYQNGSRSDLGANPFNSNTWMILEFIALVVQIGVITFTLSVSKAERPVWP 119
Query: 91 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS 150
MRIWIVGYD GC+LSLLLLY RY++ Y++Q DGFSLPD+EQQR++E+SR SHLMNKCRTS
Sbjct: 120 MRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTS 179
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 210
LELFFAIWFVMGNVWVFDSRFGSF RAP LHVLCI+LLAWNA+SYSFPFLLF+LLCCCVP
Sbjct: 180 LELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVP 239
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----EDPECCI 265
L+S++LGYNMNMG+ DKGASDDQISRLPSWR+K ++NL+ N A +N E PECCI
Sbjct: 240 LVSNLLGYNMNMGSVDKGASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCI 299
Query: 266 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
CLAKY+EKEEVR+LPCSHMFHLKCVDQWLRI+SCCPLCKQE+ER
Sbjct: 300 CLAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQEIER 343
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/309 (71%), Positives = 252/309 (81%), Gaps = 33/309 (10%)
Query: 33 ARNRPAARAGAPSFLIRTAMRISRA---------------------------STWMTLEL 65
RNR ++RA SFLIRTAMRISRA STWM LE
Sbjct: 5 VRNR-SSRAPPSSFLIRTAMRISRARWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEF 63
Query: 66 LALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFS 125
+AL+VQI +ITFTLS+SK E P+WPMRIWIVGYD GC+LSLLLLY RY++ Y++Q DGFS
Sbjct: 64 IALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFS 123
Query: 126 LPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCI 185
LPD+EQQR++E+SR SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF RAP LHVLCI
Sbjct: 124 LPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 183
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV 245
+LLAWNA+SYSFPFLLF+LLCCCVPL+S++LGYNMNMG+ DKGASDDQISRLPSWR+K
Sbjct: 184 TLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFKEA 243
Query: 246 DSNLEAGNSAPAN-----EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
++NL+ N A +N E PECCICLAKY+EKEEVR+LPCSHMFHLKCVDQWLRI+SCC
Sbjct: 244 NANLDLPNGADSNSPLSSEYPECCICLAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCC 303
Query: 301 PLCKQELER 309
PLCKQE+ER
Sbjct: 304 PLCKQEIER 312
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/323 (71%), Positives = 255/323 (78%), Gaps = 14/323 (4%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDR---MARNRPAARAGAPSFLIRTAMRIS-- 55
MNTRY DS CNS T V +SS+ E+R R R F + R +
Sbjct: 1 MNTRYFSTPDSFCNSGTAVSFSSNSAVGENRGPVSIRTRSXVPFLRRVFHYQNGSRSNLG 60
Query: 56 ----RASTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYG 111
+STWM LE +ALLVQIS+ TFTL ISK E PIWPMRIWIVGYDIGCLLSLLL+YG
Sbjct: 61 SNPFNSSTWMMLEFIALLVQISMTTFTLVISKMEKPIWPMRIWIVGYDIGCLLSLLLVYG 120
Query: 112 RYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRF 171
RYRQ++ Q D F L D+EQQR SEDSR +HLMNKCRTSLELFFAIWFVMGNVWVFDSRF
Sbjct: 121 RYRQVHVVQGDSFGLSDLEQQRGSEDSRCTHLMNKCRTSLELFFAIWFVMGNVWVFDSRF 180
Query: 172 GSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASD 231
GSF RAP LHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNM MG+A++GASD
Sbjct: 181 GSFNRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMQMGSAERGASD 240
Query: 232 DQISRLPSWRYKRVDSNLEAGN-----SAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
DQISRLPSW+YK VD+N E + S AN+DPECCICLAKYK+KEEVR+LPCSHMFH
Sbjct: 241 DQISRLPSWKYKAVDTNSEVASNIDCTSTLANDDPECCICLAKYKDKEEVRQLPCSHMFH 300
Query: 287 LKCVDQWLRILSCCPLCKQELER 309
LKCVDQWLRI+SCCPLCKQELER
Sbjct: 301 LKCVDQWLRIISCCPLCKQELER 323
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/347 (67%), Positives = 263/347 (75%), Gaps = 44/347 (12%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMA---RNRPAARAGAPSFLIRTAMRISRA 57
MNTRY FP +S C SS P +S PA E+ RNR +AR S L+RTAMRISRA
Sbjct: 1 MNTRYPFPMNSFCGSS---PVAS--PAGEEHGTVSLRNR-SARTPTSSLLVRTAMRISRA 54
Query: 58 ---------------------------STWMTLELLALLVQISIITFTLSISKKESPIWP 90
S WM LE +AL++QISI FTL+ISK E P+WP
Sbjct: 55 RWFTFLRRVFHYQNGSRSNLGSNPFNSSPWMMLEFVALVIQISITMFTLAISKAEKPVWP 114
Query: 91 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDS---RFSHLMNKC 147
+RIWI+GY+IGC+LSLLLLYGRYRQ+ +Q DGF LPD+EQQR SE+S R S LM+KC
Sbjct: 115 VRIWIIGYNIGCVLSLLLLYGRYRQINTTQADGFGLPDLEQQRGSEESSVCRCSILMHKC 174
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
RTSLELFFAIWFVMGNVWVFDSRFGS+ RAP LHVLCISLLAWNALSYSFPFLLFLLLCC
Sbjct: 175 RTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCC 234
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----EDPE 262
CVPLIS+VLGYNMNMG+A++GASDDQIS LPSWRYK D+N E N+A N ED E
Sbjct: 235 CVPLISTVLGYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIASEDLE 294
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
CCICLAKYK+KEEVRKLPCSHMFHLKCVDQWLRI+SCCPLCKQ LER
Sbjct: 295 CCICLAKYKDKEEVRKLPCSHMFHLKCVDQWLRIISCCPLCKQGLER 341
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/343 (61%), Positives = 251/343 (73%), Gaps = 34/343 (9%)
Query: 1 MNTRYSFPSD----SLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISR 56
MNTRYS + ++ + ++ SS P E+ A + A SF IR AM++SR
Sbjct: 1 MNTRYSVQPELSSNNISITISSSASLSSSPRGENSHAADGNAQERSPSSFYIRLAMKVSR 60
Query: 57 A---------------------------STWMTLELLALLVQISIITFTLSISKKESPIW 89
A STWM EL+ALLVQ+++ITFTL+ISK+E PIW
Sbjct: 61 ARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIW 120
Query: 90 PMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-RSSEDSRFSHLMNKCR 148
P+R+WI GYD+GCLL+L+LLYGRYRQL Q +GF L DVEQQ R E++R SHLMNKCR
Sbjct: 121 PVRLWITGYDVGCLLNLMLLYGRYRQLDVYQGNGFVLGDVEQQQRGREETRSSHLMNKCR 180
Query: 149 TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCC 208
TSLELFFAIWFV+GNVWVFDSRFGSF AP LHVLC+SLL+WNA+ YSFPFLLFL LCC
Sbjct: 181 TSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLSWNAICYSFPFLLFLFLCCL 240
Query: 209 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL--EAGNSAPANEDPECCIC 266
VPLISS+LGYNMNMG++D+ ASDDQIS LPSW++KR+D N +SA A +DPECCIC
Sbjct: 241 VPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDENASDSDSDSATATDDPECCIC 300
Query: 267 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
LAKYK+KEEVRKLPC H FH KCVDQWLRI+SCCPLCKQ+L R
Sbjct: 301 LAKYKDKEEVRKLPCQHKFHSKCVDQWLRIISCCPLCKQDLPR 343
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/295 (65%), Positives = 228/295 (77%), Gaps = 36/295 (12%)
Query: 17 TTVPYSSSPPATEDRMA--RNRPAARAGAPSFLIRTAMRISRA----------------- 57
+ VP+SS+ ATEDR+A RNRP R PSFL+R AMRISRA
Sbjct: 15 SMVPFSSNS-ATEDRVASARNRPP-RVTPPSFLVRIAMRISRARWFTFLRRVFHYQNGSR 72
Query: 58 ----------STWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLL 107
STWM LE +AL++QI+I TFTL+ISK+E PIWPMRIW+ GYDIGC+L+LL
Sbjct: 73 SNLGSNPFNSSTWMMLEFIALILQITITTFTLAISKRERPIWPMRIWVSGYDIGCVLNLL 132
Query: 108 LLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 167
LLYGRYRQ+Y +Q D SL D+EQQR++E++R SHLMNKCRTSLELFFAIWFVMGNVWVF
Sbjct: 133 LLYGRYRQIYLTQGDSLSLSDIEQQRNNEETRMSHLMNKCRTSLELFFAIWFVMGNVWVF 192
Query: 168 DSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADK 227
DSRFGSF AP LHVLCI LLAWNA+ YSFPFLLF+LLCCCVPLIS++LGYNMNM +++K
Sbjct: 193 DSRFGSFHHAPKLHVLCIILLAWNAMCYSFPFLLFVLLCCCVPLISTLLGYNMNMASSNK 252
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPA-----NEDPECCICLAKYKEKEEVR 277
GAS+DQIS+LPSWR+K + LE GN++ NEDPECCICLAKYK++EEVR
Sbjct: 253 GASNDQISQLPSWRHKEAGAKLELGNASEGSEKLINEDPECCICLAKYKDEEEVR 307
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/344 (61%), Positives = 252/344 (73%), Gaps = 36/344 (10%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGA-----PSFLIRTAMRIS 55
MNTRYS + L +S+ T+ SSS + N A A SF IR AM++S
Sbjct: 1 MNTRYSNQPE-LSSSNITITISSSALLSSSPRGDNSHVAAANGQERSPSSFYIRLAMKVS 59
Query: 56 RA---------------------------STWMTLELLALLVQISIITFTLSISKKESPI 88
RA STWM EL+ALLVQ+++ITFTL+ISK+E PI
Sbjct: 60 RARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPI 119
Query: 89 WPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-RSSEDSRFSHLMNKC 147
WP+R+WI GYD+GCLL+L+LLYGRYRQL +Q +GF L DVEQQ R E++R SHLMNKC
Sbjct: 120 WPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRGREETRSSHLMNKC 179
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
RTSLELFFAIWFV+GNVWVFDSRFGSF AP LHVLC+SLLAWNA+ YSFPFLLFL LCC
Sbjct: 180 RTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCC 239
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV--DSNLEAGNSAPANEDPECCI 265
VPLISS+LGYNMNMG++D+ ASDDQIS LPSW++KR+ ++ +SA +DPECCI
Sbjct: 240 LVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCI 299
Query: 266 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
CLAKYK+KEEVRKLPCSH FH KCVDQWLRI+SCCPLCKQ+L R
Sbjct: 300 CLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/261 (77%), Positives = 232/261 (88%), Gaps = 8/261 (3%)
Query: 57 ASTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 116
+S+WM LE +ALL+QI I TFTL+ISK E+P+WP+RIWI+GY+IGC+LSLLLLYGRYRQL
Sbjct: 33 SSSWMMLEFVALLLQICITTFTLAISKAENPVWPVRIWIIGYNIGCVLSLLLLYGRYRQL 92
Query: 117 YASQVDGFSLPDVEQQRSSEDS---RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 173
A+Q DGF LPD+EQQ SE+S R+SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS
Sbjct: 93 NATQGDGFGLPDLEQQGGSEESSVCRYSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 152
Query: 174 FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQ 233
+ RAP LHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS+V+GYNM+MG+A++GASDDQ
Sbjct: 153 YFRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVIGYNMSMGSAERGASDDQ 212
Query: 234 ISRLPSWRYKRVDSNLEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLK 288
ISRLPS RYK VD++ E NS A+ED ECCICLAKYK+ EEVR+LPCSHMFHLK
Sbjct: 213 ISRLPSRRYKAVDTDSEFRNSVDCDSTVASEDLECCICLAKYKDIEEVRQLPCSHMFHLK 272
Query: 289 CVDQWLRILSCCPLCKQELER 309
CVDQWLRI+SCCPLCKQELE+
Sbjct: 273 CVDQWLRIISCCPLCKQELEK 293
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/336 (62%), Positives = 246/336 (73%), Gaps = 32/336 (9%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRAS-- 58
M+TRYS S +S TV SSS +T+ + + + SF +R AMR+SRA
Sbjct: 130 MSTRYSSQLQSSAINSITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWF 189
Query: 59 -------------------------TWMTLELLALLVQISIITFTLSISKKESPIWPMRI 93
WM EL+ALL+QI++IT TL++SK E P+WPMR+
Sbjct: 190 IFLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRL 249
Query: 94 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSS--EDSRFSHLMNKCRTSL 151
WI GY++GCLL+L+LLYGRYRQ S + FS D+EQQ+ S E +R SHLMNKCRTSL
Sbjct: 250 WITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSL 309
Query: 152 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 211
ELFFAIWFV+GNVWVFDSRFGSF AP LHVLCISLLAWNAL YSFPFLLFLLLCC VPL
Sbjct: 310 ELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPL 369
Query: 212 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 271
+SS LGYNMN+G+++KGASDDQIS LPSW+YK +D E +S+ AN DPECCICLAKYK
Sbjct: 370 VSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLID---ETSDSSQANNDPECCICLAKYK 426
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
EKEEVRKLPCSH FHLKCVDQWLRI+SCCPLCKQ+L
Sbjct: 427 EKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 462
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/336 (63%), Positives = 252/336 (75%), Gaps = 32/336 (9%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRAS-- 58
M+TR+S S +S TV SSS +T + + + SFL+R AMR+SRA+
Sbjct: 1 MSTRFSSQLQSSAINSITVSSSSSLDSTSRDDNIHMAPESSPSSSFLMRLAMRVSRATWF 60
Query: 59 -------------------------TWMTLELLALLVQISIITFTLSISKKESPIWPMRI 93
TWM EL+ALLVQI++IT TL++SKKE P+WPMR+
Sbjct: 61 IFLRRVFHYQNASRSDLGTNPFNSITWMISELIALLVQITVITSTLALSKKERPVWPMRL 120
Query: 94 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVE-QQRSSEDS-RFSHLMNKCRTSL 151
WI GY++GCLL+L+LLYGRYRQ + SQ + FS D+E QQRS E++ R SHLMN+CRTSL
Sbjct: 121 WITGYNVGCLLNLMLLYGRYRQQHTSQGNAFSFGDIELQQRSREETTRCSHLMNRCRTSL 180
Query: 152 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 211
ELFFAIWFV+GNVWVFDSRFGSF AP LHVLCISLLAWNAL YSFPFLLFLLLCC VPL
Sbjct: 181 ELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPL 240
Query: 212 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 271
+SS LGYNMN+G+++KGASDDQIS LPSW+YK +D EA +SA A+ DPECCICLAKYK
Sbjct: 241 LSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLID---EASDSAQASNDPECCICLAKYK 297
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
EKEEVRKLPCSH FHLKCVDQWLRI+SCCPLCKQ L
Sbjct: 298 EKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQNL 333
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/336 (62%), Positives = 246/336 (73%), Gaps = 32/336 (9%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRAS-- 58
M+TRYS S +S TV SSS +T+ + + + SF +R AMR+SRA
Sbjct: 1 MSTRYSSQLQSSAINSITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWF 60
Query: 59 -------------------------TWMTLELLALLVQISIITFTLSISKKESPIWPMRI 93
WM EL+ALL+QI++IT TL++SK E P+WPMR+
Sbjct: 61 IFLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRL 120
Query: 94 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSS--EDSRFSHLMNKCRTSL 151
WI GY++GCLL+L+LLYGRYRQ S + FS D+EQQ+ S E +R SHLMNKCRTSL
Sbjct: 121 WITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSL 180
Query: 152 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 211
ELFFAIWFV+GNVWVFDSRFGSF AP LHVLCISLLAWNAL YSFPFLLFLLLCC VPL
Sbjct: 181 ELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPL 240
Query: 212 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 271
+SS LGYNMN+G+++KGASDDQIS LPSW+YK +D E +S+ AN DPECCICLAKYK
Sbjct: 241 VSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLID---ETSDSSQANNDPECCICLAKYK 297
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
EKEEVRKLPCSH FHLKCVDQWLRI+SCCPLCKQ+L
Sbjct: 298 EKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/333 (63%), Positives = 255/333 (76%), Gaps = 36/333 (10%)
Query: 12 LCNSSTTVPYSSSPPATEDRM--ARNRPAARAGAPSFLIRTAMRISRA------------ 57
L NS++ V SS+ E+R+ +RNRP A +PSF +R AMRISR+
Sbjct: 6 LLNSNSIVQSSSNSETREERVVSSRNRPQ-HASSPSFSVRMAMRISRSRWFTLLRRVFHY 64
Query: 58 ---------------STWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGC 102
STW+ +E +AL++QI I TFTL ISK+E P+WPMRIWI GYDIGC
Sbjct: 65 QNGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYDIGC 124
Query: 103 LLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMG 162
+L+LL +YGRYRQ+Y Q D SL D+EQQR+S ++R SHLMNKCRTSLE FFAIWFVMG
Sbjct: 125 VLNLLTVYGRYRQIYLIQGDALSLSDIEQQRNSGETRMSHLMNKCRTSLEFFFAIWFVMG 184
Query: 163 NVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNM 222
NVWVFDSRFGSFQ+AP LHVLCI+LL WNA+ YSFPFLLFLLLCCCVPLIS++LGYNMN+
Sbjct: 185 NVWVFDSRFGSFQQAPKLHVLCITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNI 244
Query: 223 GAADKGASDDQISRLPSWRYKRVD-SNLEAGNSAPA-----NEDPECCICLAKYKEKEEV 276
+++KGASD+QIS+LPSWR+K + LE GN + + NEDPECCICLAKYK+KEEV
Sbjct: 245 ASSNKGASDEQISQLPSWRHKEPHATKLELGNDSESIEKFINEDPECCICLAKYKDKEEV 304
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
R+LPCSH+FHL+CVDQWL+I+SCCPLCKQ LER
Sbjct: 305 RQLPCSHVFHLECVDQWLKIISCCPLCKQGLER 337
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/336 (62%), Positives = 255/336 (75%), Gaps = 39/336 (11%)
Query: 12 LCNSSTTVPYSSSPPATEDRM--ARNRPAARAGAPSFLIRTAMRISRA------------ 57
L NS++ V SS+ E+R+ +RNRP A +PSF +R AMRISR+
Sbjct: 6 LLNSNSIVQSSSNSETREERVVSSRNRPQ-HASSPSFSVRMAMRISRSRWFTLLRRVFHY 64
Query: 58 ---------------STWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGC 102
STW+ +E +AL++QI I TFTL ISK+E P+WPMRIWI GYDIGC
Sbjct: 65 QNGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYDIGC 124
Query: 103 LLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDS---RFSHLMNKCRTSLELFFAIWF 159
+L+LL +YGRYRQ+Y Q D SL D+EQQR+S ++ R SHLMNKCRTSLE FFAIWF
Sbjct: 125 VLNLLTVYGRYRQIYLIQGDALSLSDIEQQRNSGETSVYRMSHLMNKCRTSLEFFFAIWF 184
Query: 160 VMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYN 219
VMGNVWVFDSRFGSFQ+AP LHVLCI+LL WNA+ YSFPFLLFLLLCCCVPLIS++LGYN
Sbjct: 185 VMGNVWVFDSRFGSFQQAPKLHVLCITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYN 244
Query: 220 MNMGAADKGASDDQISRLPSWRYKRVD-SNLEAGNSAPA-----NEDPECCICLAKYKEK 273
MN+ +++KGASD+QIS+LPSWR+K + LE GN + + NEDPECCICLAKYK+K
Sbjct: 245 MNIASSNKGASDEQISQLPSWRHKEPHATKLELGNDSESIEKFINEDPECCICLAKYKDK 304
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
EEVR+LPCSH+FHL+CVDQWL+I+SCCPLCKQ LER
Sbjct: 305 EEVRQLPCSHVFHLECVDQWLKIISCCPLCKQGLER 340
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/307 (60%), Positives = 227/307 (73%), Gaps = 35/307 (11%)
Query: 38 AARAGAPSFLIRTAMRISRA---------------------------STWMTLELLALLV 70
A+ + PSF ++ AM+ISRA +WM +EL+ALL
Sbjct: 9 ASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLF 68
Query: 71 QISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVE 130
Q+ I FTL+IS+ E P+WPMR+WI GYD+GC+LSLLLLYGR+R Y Q DG SL D+E
Sbjct: 69 QLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIE 128
Query: 131 --QQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLL 188
QQR++E SR+SHLMN+CRTSL+LFFAIWFVMGN+W FDSR SFQRAP LH+LC LL
Sbjct: 129 HEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLL 188
Query: 189 AWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN 248
WNA+ YSFPF+LFLLLCCCVPLISS+ GYN+N G+ +KGASDDQIS+LP WRYK V++N
Sbjct: 189 VWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEAN 248
Query: 249 ------LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
L+ N+ EDPECCICLAKY +KEEVR+LPCSH+FHL+CVD+WL I S CPL
Sbjct: 249 INPRSQLDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPL 308
Query: 303 CKQELER 309
CKQ+L+R
Sbjct: 309 CKQQLQR 315
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 175/261 (67%), Positives = 213/261 (81%), Gaps = 8/261 (3%)
Query: 57 ASTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 116
+ +WM +EL+ALL Q+ I FTL+IS+ E P+WPMR+WI GYD+GC+LSLLLLYGR+R
Sbjct: 39 SGSWMAMELVALLFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYH 98
Query: 117 YASQVDGFSLPDVE--QQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF 174
Y Q DG SL D+E QQR++E SR+SHLMN+CRTSL+LFFAIWFVMGN+W FDSR SF
Sbjct: 99 YLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASF 158
Query: 175 QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
QRAP LH+LC LL WNA+ YSFPF+LFLLLCCCVPLISS+ GYN+N G+ +KGASDDQI
Sbjct: 159 QRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQI 218
Query: 235 SRLPSWRYKRVDSN------LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLK 288
S+LP WRYK V++N L+ N+ EDPECCICLAKY +KEEVR+LPCSH+FHL+
Sbjct: 219 SQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLR 278
Query: 289 CVDQWLRILSCCPLCKQELER 309
CVD+WL I S CPLCKQ+L+R
Sbjct: 279 CVDKWLAITSSCPLCKQQLQR 299
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 188/337 (55%), Positives = 231/337 (68%), Gaps = 32/337 (9%)
Query: 1 MNTRYSFPSDSLCN--SSTTVPYSSSPPATEDRMARNRPAARAGAP-SFLIRTAMRISRA 57
+N+ Y F S S CN T++ +S ++ + R P SF +R AMR+SRA
Sbjct: 2 INSVY-FVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
Query: 58 ---------------------------STWMTLELLALLVQISIITFTLSISKKESPIWP 90
S+WM +EL+A++ Q+SI F L+IS+ E PIWP
Sbjct: 61 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
Query: 91 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS 150
MR+WIVGYD+GC+LSLLLLYGRY LY + L D EQ+R+S+ SR HLMNKCRTS
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASRSLHLMNKCRTS 180
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 210
LELFFAIWFVMGNVW+ DSRF SFQRAP LH+LC+ LL WNA+ YSFPF+LFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 270
L+SS+LGYN++M + DK A DDQIS+LP WRYK V S N EDPECCICL KY
Sbjct: 241 LVSSLLGYNISMASTDKAALDDQISQLPCWRYK-VSSMQPDSNEGLPKEDPECCICLVKY 299
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+++EEVR+LPCSH FHL+CVD+WL I S CPLCKQ+L
Sbjct: 300 RDEEEVRQLPCSHFFHLRCVDKWLSITSSCPLCKQQL 336
>gi|9758617|dbj|BAB09279.1| unnamed protein product [Arabidopsis thaliana]
Length = 320
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 167/278 (60%), Positives = 199/278 (71%), Gaps = 34/278 (12%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGA-----PSFLIRTAMRIS 55
MNTRYS + L +S+ T+ SSS + N A A SF IR AM++S
Sbjct: 1 MNTRYSNQPE-LSSSNITITISSSALLSSSPRGDNSHVAAANGQERSPSSFYIRLAMKVS 59
Query: 56 RA---------------------------STWMTLELLALLVQISIITFTLSISKKESPI 88
RA STWM EL+ALLVQ+++ITFTL+ISK+E PI
Sbjct: 60 RARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPI 119
Query: 89 WPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-RSSEDSRFSHLMNKC 147
WP+R+WI GYD+GCLL+L+LLYGRYRQL +Q +GF L DVEQQ R E++R SHLMNKC
Sbjct: 120 WPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRGREETRSSHLMNKC 179
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
RTSLELFFAIWFV+GNVWVFDSRFGSF AP LHVLC+SLLAWNA+ YSFPFLLFL LCC
Sbjct: 180 RTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCC 239
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV 245
VPLISS+LGYNMNMG++D+ ASDDQIS LPSW++KR+
Sbjct: 240 LVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRI 277
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/254 (55%), Positives = 182/254 (71%), Gaps = 9/254 (3%)
Query: 57 ASTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 116
+S W+ LEL ++ Q+ + T ++ S KE P WP+R+W+ Y++G +LSL LLY R+R
Sbjct: 56 SSGWLALELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRH- 114
Query: 117 YASQVDGFSLPDVEQQRSSED--SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF 174
+S G +L D + + D S+LMNK R LELFFA+WFVMGNVWVFD+R GSF
Sbjct: 115 SSSGARGGTLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSF 174
Query: 175 QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
RAP L+ LCI LLAWNA+ YS PFLLFLLLCC VP + LGYNMN + +GASD+Q+
Sbjct: 175 HRAPRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQL 234
Query: 235 SRLPSWRYKR-VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+ LP WR+K D+ + ++D ECCICLA+YKEKEEVR+LPC+HMFHLKCVD+W
Sbjct: 235 AALPQWRFKEPADAPRDRD-----HDDQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRW 289
Query: 294 LRILSCCPLCKQEL 307
LRI+S CPLCKQEL
Sbjct: 290 LRIISSCPLCKQEL 303
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/251 (56%), Positives = 180/251 (71%), Gaps = 9/251 (3%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+ LEL ++ Q+ + T ++ S KE P WP+R+W+ Y++G +LSL LLY R+R +S
Sbjct: 59 WLALELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRH-SSS 117
Query: 120 QVDGFSLPDVEQQRSSED--SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRA 177
G +L D + + D S+LMNK R LELFFA+WFVMGNVWVFD+R GSF RA
Sbjct: 118 GARGGTLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 177
Query: 178 PNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRL 237
P L+ LCI LLAWNA+ YS PFLLFLLLCC VP + LGYNMN + +GASD+Q++ L
Sbjct: 178 PRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAAL 237
Query: 238 PSWRYKR-VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRI 296
P WR+K D+ + ++D ECCICLA+YKEKEEVR+LPC+HMFHLKCVD+WLRI
Sbjct: 238 PQWRFKEPADAPRDRD-----HDDQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRI 292
Query: 297 LSCCPLCKQEL 307
+S CPLCKQEL
Sbjct: 293 ISSCPLCKQEL 303
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 201/328 (61%), Gaps = 38/328 (11%)
Query: 9 SDSLCNSSTTVPYSSSPP-ATEDRMARNRPAARAGAPSFLIRTAMRISRA---------- 57
D N+ P ++ PP A A PA + A +F +R R+SRA
Sbjct: 2 GDQHANAPFLPPTTAMPPQAPSSSAATTPPAGTSRASAFTMRAVARMSRARWFIFLRRVY 61
Query: 58 -----------------STWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDI 100
W+ LEL ++ Q+ I T + S KE P WP+R+W+ Y++
Sbjct: 62 QYQNGPRSDLGSNPFNSPGWLALELGVIVAQMLITTVVVVSSPKERPAWPLRLWVAAYNV 121
Query: 101 GCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSR-FSHLMNKCRTSLELFFAIWF 159
G +LSL LL+ R+R A+ D E +S+ R S+LMNK R LELFFA+WF
Sbjct: 122 GNVLSLPLLFWRHRHSSAAGRGD----DPEMHGASDALRNSSYLMNKARAFLELFFAMWF 177
Query: 160 VMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYN 219
VMGNVWVFD+R GSF RAP L+ LCI LL+WNA+ YS PFLLFLLLCC VP++ LGYN
Sbjct: 178 VMGNVWVFDARLGSFHRAPRLYALCIGLLSWNAIVYSLPFLLFLLLCCFVPVVGYALGYN 237
Query: 220 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
MN + +GASD+Q++ LP WR+K D + ++D ECCICLA+Y+EKEE+R+L
Sbjct: 238 MNSASIGRGASDEQLAALPRWRFKEPDVPRDR-----EHDDQECCICLAQYREKEEMRQL 292
Query: 280 PCSHMFHLKCVDQWLRILSCCPLCKQEL 307
PC+HMFHLKCVD+WLRI+S CPLCKQEL
Sbjct: 293 PCTHMFHLKCVDRWLRIISSCPLCKQEL 320
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 177/249 (71%), Gaps = 10/249 (4%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+ LEL ++ Q+ I T ++ S KE P WP+R+W+ Y++G +LSL LLY R++ A+
Sbjct: 480 WLALELGVIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAA 539
Query: 120 QVDGFSLPDVEQQRSSEDSR-FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
+ D E + + R S+LMNK R LELFFA+WFVMGNVWVFD+R GSF RAP
Sbjct: 540 RRGD----DPEMHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAP 595
Query: 179 NLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 238
L+ LCI LLAWNA+ YS PFLLFLLLCC VP++ LGYNMN + +GASD+Q+ LP
Sbjct: 596 RLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALP 655
Query: 239 SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 298
WR+K D + +D ECCICLA+Y+EKEEVR+LPC+HMFHLKCVD+WLRI+S
Sbjct: 656 RWRFKEPDVPRDR-----EKDDQECCICLAQYREKEEVRQLPCTHMFHLKCVDRWLRIIS 710
Query: 299 CCPLCKQEL 307
CPLCKQEL
Sbjct: 711 SCPLCKQEL 719
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 177/249 (71%), Gaps = 10/249 (4%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+ LEL ++ Q+ I T ++ S KE P WP+R+W+ Y++G +LSL LLY R++ A+
Sbjct: 65 WLALELGVIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAA 124
Query: 120 QVDGFSLPDVEQQRSSEDSR-FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
+ D E + + R S+LMNK R LELFFA+WFVMGNVWVFD+R GSF RAP
Sbjct: 125 RRGD----DPEMHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAP 180
Query: 179 NLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 238
L+ LCI LLAWNA+ YS PFLLFLLLCC VP++ LGYNMN + +GASD+Q+ LP
Sbjct: 181 RLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALP 240
Query: 239 SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 298
WR+K D + +D ECCICLA+Y+EKEEVR+LPC+HMFHLKCVD+WLRI+S
Sbjct: 241 RWRFKEPDVPRDR-----EKDDQECCICLAQYREKEEVRQLPCTHMFHLKCVDRWLRIIS 295
Query: 299 CCPLCKQEL 307
CPLCKQEL
Sbjct: 296 SCPLCKQEL 304
>gi|224056495|ref|XP_002298884.1| predicted protein [Populus trichocarpa]
gi|222846142|gb|EEE83689.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/171 (84%), Positives = 154/171 (90%), Gaps = 5/171 (2%)
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 203
M+KCRTSLELFFAIWFVMGNVWVFDSRFGS+ RAP LHVLCISLLAWNALSYSFPFLLFL
Sbjct: 1 MHKCRTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFL 60
Query: 204 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN----- 258
LLCCCVPLIS+VLGYNMNMG+A++GASDDQIS LPSWRYK D+N E N+A N
Sbjct: 61 LLCCCVPLISTVLGYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIAS 120
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
ED ECCICLAKYK+KEEVRKLPCSHMFHLKCVDQWLRI+SCCPLCKQ LER
Sbjct: 121 EDLECCICLAKYKDKEEVRKLPCSHMFHLKCVDQWLRIISCCPLCKQGLER 171
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 179/250 (71%), Gaps = 6/250 (2%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+ LEL ++ Q+ + T ++ S E P WP+R+W+ Y++G +LSL LLY R+R +S
Sbjct: 185 WLALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWRHRHSSSS 244
Query: 120 QVDGFSLPDVEQQRSSE-DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
G D+E +++ S+LMNK R LELFFA+WFVMGNVWVFD+R GSFQRAP
Sbjct: 245 SSAGGGRGDLEMHGANDAPGNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAP 304
Query: 179 NLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 238
L+ LC+SLLAWNA+ YS PFLLFLLLCC VP + LGYNMN + +GASD+Q++ LP
Sbjct: 305 RLYALCVSLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALP 364
Query: 239 SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 298
WR+K D + +D ECCICLA+Y EKEEVR+LPC+H+FHLKCVD+WLRI+S
Sbjct: 365 RWRFKEPDVARDR-----ERDDQECCICLAQYGEKEEVRQLPCTHVFHLKCVDRWLRIIS 419
Query: 299 CCPLCKQELE 308
CPLCKQEL+
Sbjct: 420 SCPLCKQELK 429
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 182/360 (50%), Gaps = 60/360 (16%)
Query: 4 RYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARA----GAPSFLIRTAMRIS---- 55
R S PS S +S + P PA +A GAPS + R S
Sbjct: 18 RDSGPSTSTSHSVARENHGEPNPVDRSATRALVPALQAPSAVGAPSAGHTSGARRSDNYV 77
Query: 56 -------RASTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLL 108
+ W+++E+L + QI LS+S+KE P P+ W++GY +GC +L
Sbjct: 78 RRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPH 137
Query: 109 LYGRYRQLYASQVDGFSLPDVEQQRSSEDS------------------------RFSHLM 144
LY RY ++ + V+G + P Q SS+++ R + L
Sbjct: 138 LYWRY--IHRNIVNGENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLANPRINALF 195
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 204
+ + +L+ FFA+WFV+GNVW+F R S APNL+ LCI L ++ + Y+ PF+L +
Sbjct: 196 DHFKMALDCFFAVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAM 254
Query: 205 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN------ 258
+CCC+P I SV+G+ + +GA+ + I+ LP++++K +GN A
Sbjct: 255 ICCCLPCIISVMGFREDTNNT-RGATSESINSLPTYKFKTKKRRHSSGNEAEGQDGGIVA 313
Query: 259 -----------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICLAKY +E+R+LPC+H FH +CVD+WL+I + CPLCK E+
Sbjct: 314 AGTDKERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEI 373
>gi|444436429|gb|AGE09582.1| C3HC4Z1-like protein, partial [Eucalyptus cladocalyx]
Length = 137
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 120/137 (87%), Gaps = 5/137 (3%)
Query: 178 PNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRL 237
P LH+LCISLLAWNA+SYSFPFLLFLLLCC VPL+S+ LGYNMN+ + ++GASDDQISRL
Sbjct: 1 PKLHMLCISLLAWNAVSYSFPFLLFLLLCCFVPLMSTFLGYNMNVASVERGASDDQISRL 60
Query: 238 PSWRYKRVDSNLEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
PSW+YK+VD+NL G+ + ANED ECCICL+KYKE+EEVR+LPCSHMFH KCVDQ
Sbjct: 61 PSWKYKQVDNNLGLGDDSNHNLVLANEDKECCICLSKYKEREEVRQLPCSHMFHQKCVDQ 120
Query: 293 WLRILSCCPLCKQELER 309
WLRI SCCPLCK+ELER
Sbjct: 121 WLRITSCCPLCKKELER 137
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 161/289 (55%), Gaps = 45/289 (15%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++E+L + QI LS+S+KE P P+ W++GY +GC +L LY RY ++ +
Sbjct: 33 WISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRY--IHRN 90
Query: 120 QVDGFSLPDVEQQRSSEDS------------------------RFSHLMNKCRTSLELFF 155
V+G + P Q SS+++ R + L + + +L+ FF
Sbjct: 91 IVNGENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLANPRINALFDHFKMALDCFF 150
Query: 156 AIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSV 215
A+WFV+GNVW+F R S APNL+ LCI L ++ + Y+ PF+L ++CCC+P I SV
Sbjct: 151 AVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISV 209
Query: 216 LGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN----------------- 258
+G+ + +GA+ + I+ LP++++K +GN A
Sbjct: 210 MGFREDTNNT-RGATSESINSLPTYKFKTKKRRHSSGNEAEGQDGGIVAAGTDKERSLSA 268
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICLAKY +E+R+LPC+H FH +CVD+WL+I + CPLCK E+
Sbjct: 269 EDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEI 317
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 162/294 (55%), Gaps = 48/294 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY------ 113
W+ +EL+ + QI LS+SK E P P+ WIVGY GC+ +L LLY RY
Sbjct: 63 WICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGCVATLPLLYWRYYHNRGV 122
Query: 114 RQLYASQV------------------DGFSLPDVEQQRSSEDS-----RFSHLMNKCRTS 150
R+ +SQ G P + RS+++S R L+ + +
Sbjct: 123 REQESSQASPRSNDPSGTLLSDSTTNGGEDAPASSRTRSNQESWLMNARLKLLVEYFKIA 182
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 210
++ FFAIWFV+GNVW+F S +APNL+ LC+ L ++ + Y+ PF+L +CCC+P
Sbjct: 183 VDCFFAIWFVVGNVWIFGGH-SSADQAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLP 241
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYK------RVDSNLEAGNSAP-------- 256
I S+LG +M A +GAS + I+ LP++++K + +SN G
Sbjct: 242 CIISILGVREDM-AQTRGASSESINALPTYKFKMKRNKSKGESNSAVGEGGVVAAGTEKE 300
Query: 257 ---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ ED CCICLAKY+ +E+R+LPCSH+FH CVD+WL+I + CPLCK E+
Sbjct: 301 RMISGEDAACCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEV 354
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 160/300 (53%), Gaps = 54/300 (18%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ---- 115
W+++EL+ + QI LS+S+ E P P+ WIVGY GC+ +L LLY RYR
Sbjct: 109 WISVELVLTVSQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQV 168
Query: 116 -----LYASQVDGFSLPD----VEQQRSSE--------------------DSRFSHLMNK 146
Q FS+P + R+SE ++R L+
Sbjct: 169 TEQEAAQPRQSSHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEY 228
Query: 147 CRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLC 206
+ +L+ FFA+WFV+GNVW+F S APN++ LCI L ++ + Y+ PF+L +C
Sbjct: 229 FKMALDCFFAVWFVVGNVWIFGGH-SSATEAPNMYRLCIVFLTFSCIGYAMPFILCATIC 287
Query: 207 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK--------RVDSNLEAGNSAP-- 256
CC+P I S+LG+ ++G +GA+ + I LP++++K DSN AG+
Sbjct: 288 CCLPCIISLLGFREDLGQT-RGATSESIDALPTYKFKLNKHRTGDDRDSNSGAGDGGVVA 346
Query: 257 ---------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ ED CCICLAKY +E+R+LPCSH FH CVD+WL+I + CPLCK E+
Sbjct: 347 AGTEHERFISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKTEV 406
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 161/299 (53%), Gaps = 54/299 (18%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYR----- 114
W+++EL+ L QI LS+S+ E P P+ WIVGY GC+ +L LLY RYR
Sbjct: 108 WISVELVLTLSQIVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQS 167
Query: 115 --QLYASQVDG----------FSLPDVEQQRSSED-----------------SRFSHLMN 145
Q A G FSL V + S+D +R L+
Sbjct: 168 LEQDSAQNHQGSAHINVPAGPFSL-SVSRNSESDDRRSATTSPRGSQNAVLNARLKVLVE 226
Query: 146 KCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLL 205
+ +L+ FFA+WFV+GNVW+F S + APNL+ LCI L ++ + Y+ PF+L +
Sbjct: 227 YFKMALDCFFAVWFVVGNVWIFGGH-SSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATI 285
Query: 206 CCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN------- 258
CCC+P I SVLGY ++ +GA+ + I LP++++K + + +SA A+
Sbjct: 286 CCCLPCIISVLGYREDL-TQTRGATTESIDALPTYKFKLIKNRNGEDSSAGASDGGVVAA 344
Query: 259 ----------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICLAK+ +E+R+LPCSH FH +CVD+WL+I + CPLCK E+
Sbjct: 345 GTEKERVISGEDAVCCICLAKFANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEV 403
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 157/273 (57%), Gaps = 27/273 (9%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL+ + QI LS+S+ E+P P+ W+VGY GC +L +LY RYR +
Sbjct: 107 WISVELVVTVSQIIASIVVLSLSRHENPRAPLFAWVVGYASGCFATLPILYWRYRTRNQT 166
Query: 120 -QVDGFSLPDVEQQRSSE-----DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 173
V+ S R S RFS +++ + +L+ FFA+WFV+GNVW+F S
Sbjct: 167 ISVNQASETAGAATRRSRFVGIFRMRFSGMVDHFKMALDCFFAVWFVVGNVWIFGGH-SS 225
Query: 174 FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQ 233
AP L+ LCI L ++ + Y+ PF+L +CCC+P I S+LG+ ++ + +GA+ +
Sbjct: 226 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDL-SQTRGAAPES 284
Query: 234 ISRLPSWRYK----------RVDSNLEAGN---------SAPANEDPECCICLAKYKEKE 274
I LP++++K V+S G A + ED CCICLAKY + E
Sbjct: 285 IDALPTYKFKLKKNGDVDDQEVNSGAGEGGVLAAGTEKERAISGEDAVCCICLAKYADNE 344
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
E+R+LPC H FH++CVD+WL+I + CPLCK E+
Sbjct: 345 ELRELPCCHFFHVECVDKWLKINALCPLCKFEV 377
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 171/343 (49%), Gaps = 52/343 (15%)
Query: 8 PSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELLA 67
PS S+ P + PP A N AR G R + W+++E++
Sbjct: 49 PSTRALTSALQPPAAVGPP-----HAGNTSGARRG--DNYGRRHRSPLNSGLWISIEVIV 101
Query: 68 LLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----------RQLY 117
+ QI LS+S+KE P P+ W++GY +GC +L LY RY Q +
Sbjct: 102 NVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEQAH 161
Query: 118 A----SQVDGFSLPDVEQQRSSE------------DSRFSHLMNKCRTSLELFFAIWFVM 161
+ SQ S +SE + R + L + + +L+ FFA+WFV+
Sbjct: 162 SLQGSSQSQNNSTEPTHAASASERRRTAARNAVLANPRINALFDHFKMALDCFFAVWFVV 221
Query: 162 GNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMN 221
GNVW+F R S APNL+ LCI L ++ + Y+ PF+L ++CCC+P I SV+G+ +
Sbjct: 222 GNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFRED 280
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----------------EDPECC 264
+GA+ + I+ LP++++K +GN A ED CC
Sbjct: 281 TNNT-RGATSESINSLPTYKFKTKKRRHGSGNDAEGQDGGILAAGTDKERSLSAEDAVCC 339
Query: 265 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ICLAKY +E+R+L C+H FH +CVD+WL+I + CPLCK E+
Sbjct: 340 ICLAKYAHNDELRELACTHCFHKECVDKWLKINALCPLCKSEI 382
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 160/301 (53%), Gaps = 56/301 (18%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY------ 113
W+++EL+ L QI LS+S+KE P P+ WIVGY GC+ +L LLY RY
Sbjct: 106 WISVELVLTLSQIIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQA 165
Query: 114 -RQLYASQVDG----------FSLPDVEQQRSSEDSRFSH-------------------L 143
Q A G FSL V + ED R + L
Sbjct: 166 LEQDSAQNHQGSAHINVPAGPFSL-SVSRNSEGEDRRSATTSPRGGQNAVLNARYELKVL 224
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 203
+ + +L+ FFA+WFV+GNVW+F S S + APNL+ LCI L ++ + Y+ PF+L
Sbjct: 225 LEYFKMALDCFFAVWFVVGNVWIFGSH-SSAEEAPNLYRLCIVFLTFSCIGYAMPFILCA 283
Query: 204 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV-DSNLEAGNSAPAN---- 258
+CCC+P I S+LG+ ++ +GA+ + I LP+ ++K + + N E +S A+
Sbjct: 284 TICCCLPCIISILGFREDL-TQTRGATPESIDALPTHKFKLIKNRNGEDSSSGAADGGIV 342
Query: 259 ------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 306
ED CCICLAKY +E+R+LPCSH FH CVD+WL+I + CPLCK E
Sbjct: 343 AAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSE 402
Query: 307 L 307
+
Sbjct: 403 V 403
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 173/346 (50%), Gaps = 64/346 (18%)
Query: 14 NSSTTVPYSSSPPA---TEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELLALLV 70
N++ P SPP T R N R +P + W+++EL+ +
Sbjct: 66 NATQQHPTHPSPPQQRPTSSRRGDNGNGRRTRSPL----------NSGLWISVELVVTVA 115
Query: 71 QISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYR------------QLYA 118
QI + ++K E P P+ W++GY GCL +L +LY R+R + +
Sbjct: 116 QIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRATGQDSSQRATS 175
Query: 119 SQVDGFSLP----DVEQQRSSEDS------------------RFSHLMNKCRTSLELFFA 156
SQ + S P V Q E+S R + L++ + +++ FFA
Sbjct: 176 SQGNSESTPYTAVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDHFKMAIDCFFA 235
Query: 157 IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVL 216
+WFV+GNVW+F S +P L+ LCI+ L ++ + Y+ PF+L +CCC+P + SVL
Sbjct: 236 VWFVVGNVWIFGGH-SSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLISVL 294
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDSN----LEAGNSA-----------PANEDP 261
G+ N + +GA+ + I+ LP +R+K N E G + ED
Sbjct: 295 GFRENF-SQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDA 353
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
CCICL +Y + E+VR+LPCSH+FH+ CVD+WL+I + CPLCK E+
Sbjct: 354 SCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 169/317 (53%), Gaps = 58/317 (18%)
Query: 46 FLIRTAMRISRA----STWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIG 101
F+ R R +R+ W+++EL+ LL QI LS+S+ E P P+ WI+GY G
Sbjct: 96 FIRRGDTRRNRSPVHSGLWISIELVLLLSQIVASIIVLSLSRHEHPRTPLFQWIIGYASG 155
Query: 102 CLLSLLLLYGRY--------------RQ------------LYASQVDGF--SLPDVEQQR 133
C +L LLY RY RQ L++S+ +G V R
Sbjct: 156 CAATLPLLYWRYYHHNHMQEQESSQSRQTSPRINDPSGTLLFSSRTNGGEDGQSAVASSR 215
Query: 134 SSEDS-----RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLL 188
S++ S R L+ + SL+ FFA+WFV+GNVW+F S APNL+ LCI L
Sbjct: 216 SNQPSLLMNRRMKTLVEYFKISLDCFFAVWFVVGNVWIFGGH-SSANEAPNLYRLCIVFL 274
Query: 189 AWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN 248
A++ + Y+ PF+ +CCC+P I S+LG +M + ++GA+ + I+ LP +++K + N
Sbjct: 275 AFSCIGYAMPFIFCSTICCCLPCIISILGVREDM-SQNRGATSESINALPIYKFK-MKKN 332
Query: 249 LEAGNSAP------------------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
GN + ED CCICLAKY+ +E+R+LPCSH+FH CV
Sbjct: 333 KRNGNGNSAAAEGGVVAAGTEKEHVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCV 392
Query: 291 DQWLRILSCCPLCKQEL 307
D+WL+I + CPLCK ++
Sbjct: 393 DKWLKINALCPLCKSDV 409
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 43/289 (14%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY--RQLY 117
W+++E++ QI L +S+KE P P+ W++GY +GC +L LY RY R +
Sbjct: 90 WISIEVIVNFSQIVAAIVVLCVSRKEHPQAPLLEWVIGYTVGCFATLPHLYWRYIHRNIV 149
Query: 118 ASQVDGFSLPDVEQQRSSEDS----------------------RFSHLMNKCRTSLELFF 155
+ + P +S ++ R + L + + +L+ FF
Sbjct: 150 NGEHESSHTPQGSAHNNSNEATHAASASERRRNAARNAVLANPRINALFDHFKMALDCFF 209
Query: 156 AIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSV 215
A+WFV+GNVW+F R S APNL+ LCI L ++ + Y+ PF+L ++CCC+P I S+
Sbjct: 210 AVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISI 268
Query: 216 LGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANE---------------- 259
+G+ + +GAS + I+ LP++++K +G+ E
Sbjct: 269 MGFREDTNNT-RGASSESINALPTYKFKIKKRRHGSGSETEGQEGGILAAGTDKERSLSA 327
Query: 260 -DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
D CCICLAKY +E+R+LPC+H FH CVD+WL+I + CPLCK E+
Sbjct: 328 EDAVCCICLAKYAHNDELRELPCAHCFHKDCVDKWLKINALCPLCKSEI 376
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 168/317 (52%), Gaps = 58/317 (18%)
Query: 46 FLIRTAMRISRA----STWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIG 101
F+ R R +R+ W+++EL+ L+ QI LS+S+ E P P+ WI+GY G
Sbjct: 97 FIRRGDTRRNRSPVHSGLWISIELVLLVSQIVASIIVLSLSRHEHPRTPLFHWIIGYASG 156
Query: 102 CLLSLLLLYGRYRQ--------------------------LYASQVDGF--SLPDVEQQR 133
C +L LLY RY L++S+ + V R
Sbjct: 157 CAATLPLLYWRYYHHNHMREQDSSQSRQSSPRINDPSGTLLFSSRTNSGEDGQAAVASSR 216
Query: 134 SSEDS-----RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLL 188
S++ S R L+ + SL+ FFA+WFV+GNVW+F S + APNL+ LCI L
Sbjct: 217 SNQASLLMNRRMKTLVEYFKISLDCFFAVWFVVGNVWIFGGH-SSVEEAPNLYRLCIVFL 275
Query: 189 AWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN 248
A++ + Y+ PF+L +CCC+P I S+LG +M + ++GA+ + I+ LP +++K N
Sbjct: 276 AFSCIGYAMPFILCSTICCCLPCIISILGVREDM-SQNRGAASESINALPIYKFK-TKKN 333
Query: 249 LEAGNSAP------------------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
G+S + ED CCICLAKY+ +E+R+LPCSH+FH CV
Sbjct: 334 KRNGDSNSAAAEGGVVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCV 393
Query: 291 DQWLRILSCCPLCKQEL 307
D+WL+I + CPLCK ++
Sbjct: 394 DKWLKINALCPLCKSDV 410
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 161/302 (53%), Gaps = 56/302 (18%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL--- 116
W+++EL + QI LS+S+ E P P+ WIVGY GC+ +L +LY R+R
Sbjct: 108 WISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQG 167
Query: 117 ------------YASQVDG---FSL------------PDVEQQRSSED-----SRFSHLM 144
+ S + G FSL P V R+S+ +R L+
Sbjct: 168 HEQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLV 227
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 204
+ +L+ FFA+WFV+GNVW+F S APNL+ LCI L ++ + Y+ PF+L
Sbjct: 228 EYFKMALDCFFAVWFVVGNVWIFGGHSSS-SEAPNLYRLCIVFLTFSCIGYAMPFILCAT 286
Query: 205 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPA---- 257
+CCC+P I S+LG+ ++ +GA+ + I+ LP++++K + + GNS
Sbjct: 287 ICCCLPCIISILGFREDL-TQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGEGGV 345
Query: 258 ------------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
ED CCICLAKY +E+R+LPCSH FH +CVD+WL+I + CPLCK+
Sbjct: 346 VAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKR 405
Query: 306 EL 307
E+
Sbjct: 406 EV 407
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 161/302 (53%), Gaps = 56/302 (18%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL--- 116
W+++EL + QI LS+S+ E P P+ WIVGY GC+ +L +LY R+R
Sbjct: 88 WISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQG 147
Query: 117 ------------YASQVDG---FSL------------PDVEQQRSSED-----SRFSHLM 144
+ S + G FSL P V R+S+ +R L+
Sbjct: 148 HEQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLV 207
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 204
+ +L+ FFA+WFV+GNVW+F S APNL+ LCI L ++ + Y+ PF+L
Sbjct: 208 EYFKMALDCFFAVWFVVGNVWIFGGHSSS-SEAPNLYRLCIVFLTFSCIGYAMPFILCAT 266
Query: 205 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPA---- 257
+CCC+P I S+LG+ ++ +GA+ + I+ LP++++K + + GNS
Sbjct: 267 ICCCLPCIISILGFREDL-TQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGEGGV 325
Query: 258 ------------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
ED CCICLAKY +E+R+LPCSH FH +CVD+WL+I + CPLCK+
Sbjct: 326 VAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKR 385
Query: 306 EL 307
E+
Sbjct: 386 EV 387
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 158/298 (53%), Gaps = 52/298 (17%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-RQLYA 118
W+++EL + QI LS+SK E P P+ WIVGY GC+ +L LLY RY A
Sbjct: 112 WISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQA 171
Query: 119 SQVD---------------GFSLPDVEQ-------QRSSEDSRFSHLMNKCR-------- 148
S+ D FS+ + SS SR+ ++ R
Sbjct: 172 SEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYF 231
Query: 149 -TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
+L+ FFA+WFV+GNVW+F S APNL+ LC+ L ++ + Y+ PF+L +CC
Sbjct: 232 KMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICC 290
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------RVDSN---------LEAG 252
C+P I S+LGY ++ +GA+ + I+ LP+ ++K D N + AG
Sbjct: 291 CLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAG 349
Query: 253 NS---APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
A + ED CCICLAKY EE+R+LPCSH FH +CVD+WL+I + CPLCK E+
Sbjct: 350 TDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 169/322 (52%), Gaps = 50/322 (15%)
Query: 33 ARNRPAARAGAPSFLIRTAMRISRASTWMTLELLALLVQISIITFTLSISKKESPIWPMR 92
++N P AR G +R +S W+++EL+ + QI LS+S+ E P P+
Sbjct: 74 SQNAPLARRG--DNRVRRQQSPLNSSCWISVELIVTVSQIIAAISVLSLSRNEHPHAPLF 131
Query: 93 IWIVGYDIGCLLSLLLLYGRY--------RQLYASQ-VDGFSLPDVEQQRSSEDSRFSH- 142
W++GY +GC+ +L LLY RY Q ASQ S+P+ S SR S
Sbjct: 132 EWVIGYTVGCIATLPLLYWRYIHRNRLTTGQESASQNFPPNSIPEANSFTESSASRISEA 191
Query: 143 -----------------------LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPN 179
+ R +L+ FFA+WFV+GNVW+F S APN
Sbjct: 192 GHVTGTNGVSQNNTITRNPRVQAYADHFRMALDCFFAVWFVVGNVWIFGGHSSSHD-APN 250
Query: 180 LHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 239
L+ LCI+ L ++ + Y+ PF+L L+CCC+P I S++ + ++ +KGA+ + I+ L +
Sbjct: 251 LYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISLMSFREDLN-QNKGATAEAINALRT 309
Query: 240 WRYK----RVDSNLEAGNSAPANEDPE---------CCICLAKYKEKEEVRKLPCSHMFH 286
+++K R E G A D E CCICLA+Y +++R+LPC+H FH
Sbjct: 310 YKFKLKKARNGEGSEGGGILAAGTDKERIVSAEDAVCCICLARYVNNDDLRELPCTHFFH 369
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
+CVD+WL+I + CPLCK E++
Sbjct: 370 KECVDKWLKINALCPLCKAEID 391
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 159/304 (52%), Gaps = 60/304 (19%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ---- 115
W+++EL+ + QI LS+S+ E+P P+ WIVGY GC+ +L +LY R+R
Sbjct: 110 WISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRNQS 169
Query: 116 ------------------------LYASQVDGFSLPDVEQQRSSED-------SRFSHLM 144
+Y S V Q S SR + L+
Sbjct: 170 NEQDTSQASQGSSGSNPPDRSYTSIYVSHVSDEENGHATQSASRNTIMPGAFTSRLNGLV 229
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 204
+ + +L+ FFA+WFV+GNVW+F S AP L+ LCI L ++ + Y+ PF+L
Sbjct: 230 DHFKMALDCFFAVWFVVGNVWIFGGHT-SPSDAPQLYRLCIVFLTFSCIGYAMPFILCAT 288
Query: 205 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN------ 258
+CCC+P I SVLG + + ++GA+ + I+ LP +++K N E G+ AN
Sbjct: 289 ICCCLPCIISVLGIREDF-SQNRGATVESINALPIFKFKL--KNNENGDDQDANSAIDEG 345
Query: 259 ---------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
ED CCICLAKY + +E+R+LPCSH+FH++CVD+WL+I + CPLC
Sbjct: 346 GILAAGTEKERMISGEDAVCCICLAKYADDDELRELPCSHVFHVECVDKWLKINATCPLC 405
Query: 304 KQEL 307
K E+
Sbjct: 406 KNEV 409
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 180/343 (52%), Gaps = 61/343 (17%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELLALLVQIS 73
NS +T+ S+ R A R+ +P + W+++EL+ L+ QI
Sbjct: 55 NSVSTLGISTESNRRNSSSVRRGDARRSRSPV----------HSGLWISIELVLLVSQIV 104
Query: 74 IITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY------RQLYASQVDGFS-- 125
LS+S+ E P P+ WIVGY GC+ +L LL+ RY R+ ++Q S
Sbjct: 105 ASIVVLSLSRNEHPQTPLFQWIVGYASGCVATLPLLFWRYYNHNHLREQDSAQSRQTSPR 164
Query: 126 --------------LPDVEQQR--SSEDSRFSHLMNK--------CRTSLELFFAIWFVM 161
D Q SS ++ S LMN+ + SL+ FFA+WFV+
Sbjct: 165 ISDPSGTFLSISRNNGDAGQAAAASSRSNQTSILMNRRMKILVEYFKISLDCFFAVWFVV 224
Query: 162 GNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMN 221
GNVW+F R S APNL+ LCI LA++ + Y+ PF+L +CCC+P I S+LG +
Sbjct: 225 GNVWIFGGR-SSAAVAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISILGVRED 283
Query: 222 MGAADKGASDDQISRLPSWRYKRV---------DSNLEAGNSAPA--------NEDPECC 264
+ + ++GA+ + I+ LP++++K +N++ G A ED CC
Sbjct: 284 L-SQNRGATSESINALPTYKFKMKKNKKNSENNSANIDGGTVAAGTEKERVISGEDAVCC 342
Query: 265 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ICLAKY+ +E+R+LPCSH+FH CVD+WL+I + CPLCK E+
Sbjct: 343 ICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEV 385
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 158/298 (53%), Gaps = 52/298 (17%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-RQLYA 118
W+++EL + QI LS+SK E P P+ WIVGY GC+ +L LLY RY A
Sbjct: 112 WISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQA 171
Query: 119 SQVD---------------GFSLPDVEQ-------QRSSEDSRFSHLMNKCR-------- 148
S+ D FS+ + SS SR+ ++ R
Sbjct: 172 SEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYF 231
Query: 149 -TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
+L+ FFA+WFV+GNVW+F S APNL+ LC+ L ++ + Y+ PF+L +CC
Sbjct: 232 KMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICC 290
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK--RVDSNLEAGNS----------- 254
C+P I S+LGY ++ +GA+ + I+ LP+ ++K + SN + S
Sbjct: 291 CLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAG 349
Query: 255 -----APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
A + ED CCICLAKY EE+R+LPCSH FH +CVD+WL+I + CPLCK E+
Sbjct: 350 TDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 156/298 (52%), Gaps = 52/298 (17%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-RQLYA 118
W+++EL + QI LS+SK E P P+ WIVGY GC+ +L LLY RY A
Sbjct: 112 WISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQA 171
Query: 119 SQVD-GFSLPDVE---------------------QQRSSEDSRFSHLMNKCR-------- 148
S+ D G P++ SS SR+ ++ R
Sbjct: 172 SEQDSGQHRPNLNVAAGPFAFSISRTSEGDGRQTNTTSSRVSRYPGFISAARLKVIVEYF 231
Query: 149 -TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
+L+ FFA+WFV+GNVW+F S APNL+ LC+ L ++ + Y+ PF+L +CC
Sbjct: 232 KMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICC 290
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK----------RVDSNLEAG----- 252
C+P I S+LGY ++ +GA+ + I+ LP+ ++K S E G
Sbjct: 291 CLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSSGDDNGSSTSEGGVVAAG 349
Query: 253 ---NSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
A + ED CCICLAKY EE+R+LPCSH FH +CVD+WL+I + CPLCK E+
Sbjct: 350 TDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 161/301 (53%), Gaps = 55/301 (18%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL + QI LS+S+ E+P P+ W+VGY GC+ +L +LY R+R S
Sbjct: 107 WISIELFVTVGQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQS 166
Query: 120 -QVDGF---------SLPDVEQ-------QRSSED------------------SRFSHLM 144
Q D + PD Q S ED SR + LM
Sbjct: 167 GQQDSHQSHQGSSQNNPPDTSSYTAISVTQASEEDNFRSELAIANGQTGRPLSSRLNGLM 226
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 204
+ + +L+ FFA+WFV+GNVW+F + AP L+ LCI L ++ + Y+ PF+L
Sbjct: 227 DHFKMALDCFFAVWFVVGNVWIFGGH-STPTDAPKLYKLCIVFLTFSCIGYAMPFILCAT 285
Query: 205 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK-----RVDSNLEAGNS----- 254
+CCC+P I S+LG+ + + +GA+ + I+ LP +++K V+ + +G
Sbjct: 286 ICCCLPCIISLLGFREDF-SQTRGATTESINSLPIYKFKLQKSESVNDHDNSGTGEGGVL 344
Query: 255 --------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 306
A + ED CCICL KY + +E+R+LPCSH+FH+ CVD+WL+I + CPLCK E
Sbjct: 345 AEGTEKERAISGEDAICCICLNKYADNDELRELPCSHVFHVDCVDKWLKINASCPLCKSE 404
Query: 307 L 307
L
Sbjct: 405 L 405
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 157/284 (55%), Gaps = 37/284 (13%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY------ 113
W+++EL+ + QI LS+S+ E P P+ W++GY +GC +L LY RY
Sbjct: 98 WISVELVVNVSQIIAAICVLSVSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHRNLP 157
Query: 114 ---RQLYASQVDGFSLPDVE------------QQRSSEDSRFSHLMNKCRTSLELFFAIW 158
++ + + P+ ++ + RF + + +L+ FFA+W
Sbjct: 158 TTGQEPTVQNIPPNNTPEANSYGVTGTNGVSRNNEATVNPRFQAFADHFKMALDCFFAVW 217
Query: 159 FVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGY 218
FV+GNVWVF S APNL+ LCI+ L ++ + Y+ PF+L L+CCC+P I S+LG+
Sbjct: 218 FVVGNVWVFGGH-SSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISILGF 276
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGN-------SAPAN-------EDPECC 264
++ ++GAS + I+ L + ++K + GN +A N ED CC
Sbjct: 277 REDLNQ-NRGASAETINALGTCKFKSKKTRDGDGNEVGVGVVAAGTNKERVISAEDAVCC 335
Query: 265 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
ICLA+Y + +++R+LPC+H FH CVD+WL+I + CPLCK E++
Sbjct: 336 ICLARYVDNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEID 379
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 155/296 (52%), Gaps = 50/296 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL + QI LS+S+ E P P+ +W+ GY GCL +L LLY RY +
Sbjct: 78 WISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRNGT 137
Query: 120 QVD---------------------------GFSLPDVEQQRSSEDSRFSHLMNKCRTSLE 152
++P + +R L+ K + +L+
Sbjct: 138 TQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVESRARVGRLVEKFKIALD 197
Query: 153 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLI 212
FFA+WFV+GNVW+F S + APNL+ LCI L ++ + Y+ PF+L +CCC+P I
Sbjct: 198 CFFAVWFVVGNVWIFGGHSSS-REAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCI 256
Query: 213 SSVLGYNMNMGAADKGASDDQISRLPSWRYKR---------VDSNLEAGNS--------- 254
++LG+ A ++GAS + I+ LP++++K +S+ E N
Sbjct: 257 IALLGFREEQ-AQNRGASAEVIAALPTYKFKSRPSSESKDGSESDSEGSNEGGFVAAGTD 315
Query: 255 ---APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
A + +D CCICLA+Y++ E +R+L C+H FH+ CVD+WL+I + CPLCK ++
Sbjct: 316 KERAVSADDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKWLKINASCPLCKLDV 371
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 172/352 (48%), Gaps = 68/352 (19%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRIS----RASTWMTLELLALL 69
+SST VP S ++ +RN SF+ R R + W+++ELL +
Sbjct: 66 SSSTRVPLSQPSTSSTGSNSRNS--------SFIRRGDARRRRSPLNSGLWISIELLLTM 117
Query: 70 VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ--------- 120
QI LS+SK E P P+ WIVGY GC +L LLY RYR +
Sbjct: 118 SQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQASEQDSLQSSQ 177
Query: 121 --------VDGFSL-----------------PDVEQQRSSEDSRFSHLMNKCRTSLELFF 155
FSL P Q +R L+ + L+ FF
Sbjct: 178 SSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEYFKMGLDCFF 237
Query: 156 AIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSV 215
A+WFV+GNVW+F S APNL+ LCI L ++ + Y+ PF+L + +CCC+P I S+
Sbjct: 238 AVWFVVGNVWIFGGH-SSASEAPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCIISI 296
Query: 216 LGYNMNMGAADKGASDDQISRLPSWRYK----RVDSNLEAGNSAP--------------- 256
LG+ ++ + +GA+ + I+ LP++++K R + E + A
Sbjct: 297 LGFREDL-SQTRGATSESINALPTYKFKLKKSRSGDDRENNSGAGEGGGVVAAGTEKERV 355
Query: 257 -ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ ED CCICLAKY +E+R+LPCSH FH CVD+WL+I + CPLCK E+
Sbjct: 356 ISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINALCPLCKAEV 407
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 171/338 (50%), Gaps = 52/338 (15%)
Query: 20 PYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISR---ASTWMTLELLALLVQISIIT 76
P + PP E N + A S I R + W+++EL+ L QI
Sbjct: 44 PSNEVPPGPERSSGTNDASDSHNASSARIDRGHRQQNPLNSGFWISIELIVNLSQIVAAI 103
Query: 77 FTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSE 136
LS+S+ E P P+ W++GY IGC+ L LY RY ++ P +R+
Sbjct: 104 AVLSVSRNEHPHAPLFTWLLGYTIGCIAILPHLYWRYLHRNRPNMEQEMTPQSLSERNMS 163
Query: 137 DSRFSHLMNKCRTS---------------------------------LELFFAIWFVMGN 163
++ ++ RTS L+ FFA+WFV+GN
Sbjct: 164 ETNSYAAVSSPRTSEAVDGTNSTGVSRMNLPLASPRFYAMVACFKLMLDCFFAVWFVVGN 223
Query: 164 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMG 223
VW+F SR S APNL+ +CI LA+ + Y+ PF+L ++CCC+P I S+LG + ++
Sbjct: 224 VWIFGSR-SSAHDAPNLYRICIVFLAFGFIVYALPFILCTMICCCLPCIISILGVHEDLD 282
Query: 224 AADKGASDDQISRLPSWRY--KRVDSN---------LEAGNSAP---ANEDPECCICLAK 269
++GA+ + I+ L ++++ KRV L AG + ED CCICL+K
Sbjct: 283 L-NRGATTEAINTLVAYKFQSKRVHDGDVGEDGGGVLAAGTDKERIISAEDAICCICLSK 341
Query: 270 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ E++R+LPC+H+FH++C+D+WL+I + CPLCK E+
Sbjct: 342 FSNNEDLRELPCAHVFHMECIDKWLQINALCPLCKAEI 379
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 70/349 (20%)
Query: 15 SSTTVPYSSSPPA---TEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELLALLVQ 71
SS+T+ +PP T R AR + R+ S L W+++EL+ + Q
Sbjct: 59 SSSTLTAHPAPPQQRPTSSRNARRTTSTRSPLNSGL------------WISVELVVTVAQ 106
Query: 72 ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL--------------- 116
I + ++K E P P+ W++GY GC+ +L +LY R+R
Sbjct: 107 IVAAIVVMVLAKDEHPEAPLFTWVIGYTSGCIATLPILYWRFRTYSRGTGQDSSQRLSSS 166
Query: 117 -----YASQVDGFSLPDVEQQRSSEDS------------------RFSHLMNKCRTSLEL 153
S+ ++ V Q E+S R + L++ + +++
Sbjct: 167 SQANNNPSESTPYTAVSVAQAADEENSTDMSAAPRNNQVGETLRTRLNGLVDHFKMAIDC 226
Query: 154 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 213
FFA+WFV+GNVW+F S +P L+ LCI+ L ++ + Y+ PF+L +CCC+P +
Sbjct: 227 FFAVWFVVGNVWIFGGH-SSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLI 285
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----LEAGNSA-----------PAN 258
SVLG+ N + +GA+ + I+ LP +R+K N E G +
Sbjct: 286 SVLGFRENF-SQTRGATTEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISG 344
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL +Y + +VR+LPCSH+FH+ CVD+WL+I + CPLCK E+
Sbjct: 345 EDASCCICLTRYGDDVQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 393
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 172/348 (49%), Gaps = 61/348 (17%)
Query: 7 FPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELL 66
P DS +S TT Y+S N P AR + ++ + W+++EL
Sbjct: 49 LPRDSESSSGTTAAYNSP----------NTPIARRDDNRRRRQQSLN---SGFWISIELA 95
Query: 67 ALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ----------- 115
L QI LS+S+ E P P+ W++GY IGC+ +L LY RY Q
Sbjct: 96 VNLSQIIAAICVLSVSRNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLPTVQGSN 155
Query: 116 --------LYASQVDGFSLPDVEQ-------------QRSSEDSRFSHLMNKCRTSLELF 154
++ G S P V + + + R + + +L+ F
Sbjct: 156 QNYVPDNSFESNSFTGISPPHVSEAGVVTVTNGVSRNNTVTTNPRAQAFADHFKMALDCF 215
Query: 155 FAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISS 214
FA+WFV+GNVWVF S APNL+ LCI+ L ++ + Y+ PF+L L+CCC+P I S
Sbjct: 216 FAVWFVVGNVWVFGGHSSS-HDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIIS 274
Query: 215 VLGYNMNMGAADKGASDDQISRLPSWRYKR--------------VDSNLEAGNSAPANED 260
++G+ ++ ++GA+ D I+ L ++++K V + A + ED
Sbjct: 275 LMGFREDLNE-NRGATSDAINALGTYKFKTKKPRNTEGNEGGGGVFAPGTDKERAVSAED 333
Query: 261 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
CCICLA+Y + +++R LPC H FH CVD+WL+I + CPLCK E++
Sbjct: 334 AVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEID 381
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 49/299 (16%)
Query: 57 ASTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY--- 113
+S W+++EL+ + QI LS+S+KE P P+ W++GY +GC+ +L LLY RY
Sbjct: 96 SSCWISIELVVTVSQIIAAICVLSLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHR 155
Query: 114 -----RQLYASQ-VDGFSLPDVEQQRSS------------------------EDSRFSHL 143
Q ASQ S+P+ +S + R
Sbjct: 156 NRPTTGQEPASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNNMLTRNPRAQVY 215
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 203
+ R +L+ FFA+WFV+GNVWVF S APNL+ LCI+ L ++ + Y+ PF+L
Sbjct: 216 ADHFRMALDCFFAVWFVVGNVWVFGGH-SSAHDAPNLYRLCIAFLTFSCIGYAMPFILCA 274
Query: 204 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-----------LEAG 252
L+CCC+P I S++ + ++ +KGAS + I+ L ++++K S + AG
Sbjct: 275 LICCCLPCIISLMSFREDLNQ-NKGASAEAINALRTYKFKTKKSRNGEGIEVGGGVVAAG 333
Query: 253 NSAP---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ + ED CCICLA+Y +++R+LPC+H FH +CVD+WL+I + CPLCK E++
Sbjct: 334 TNKERIVSAEDAVCCICLARYSNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEID 392
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 158/295 (53%), Gaps = 49/295 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL+ + QI LS+S+ E P P+ W+VGY IGC+ ++ LY RY
Sbjct: 87 WISIELIVNVSQIIAAIAVLSVSRNEHPRAPLFEWVVGYIIGCVATIPHLYWRYLHRNCQ 146
Query: 120 QVDGFSLPDVEQQRSSEDS---------RFSHLMNK------------------------ 146
++ QR+ +S R S + N+
Sbjct: 147 NIEQEPTTQGSSQRNISESDSFAPISSARASEVGNEDNSTGVSRNNFPIASPRVYALIAC 206
Query: 147 CRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLC 206
+ +L+ FFA+WFV+GNVW+F R S APNL+ LCI L + + Y+ PF+L ++C
Sbjct: 207 LKLALDCFFAVWFVVGNVWIFGGR-SSVHDAPNLYRLCIVFLTFGFIGYALPFILCTMIC 265
Query: 207 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV-----DSNLEAGNSAPANEDP 261
CC+P I S++G++ ++ +KGA+ + I L +++YK + D + G A D
Sbjct: 266 CCLPCIISMVGFHEDLDL-NKGATTEVIDALVAYKYKSMRIRDGDVGEDNGGVLGAGTDK 324
Query: 262 E---------CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
E CCICL+K+ E++R+LPC+H+FH++C+D+WL+I + CPLCK EL
Sbjct: 325 ERTISAEDAVCCICLSKFSNNEDLRELPCAHVFHMECIDKWLKINALCPLCKSEL 379
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 175/358 (48%), Gaps = 71/358 (19%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRT------------AMRISRASTWM 61
+S T P+ P+T R + +A ++ R + + W+
Sbjct: 31 HSDTDEPHQEDRPSTSTRTPSPQSSASTSPTAYSSRNLSFPRRDSFYGRGTSLWNSGLWI 90
Query: 62 TLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------ 115
+ E + + QI+ L +S+ E P P+ WI+GY +GC SL L+Y RY
Sbjct: 91 SFEFVMYVAQITAAIVILILSRHELPHAPLVAWIIGYTVGCTASLPLVYWRYVHRNRPSE 150
Query: 116 ------------LYASQVDGFSLPDVEQQRSSED-----------SRFSHLMNKCRTSLE 152
L +S +G QR+S R S L +T+++
Sbjct: 151 EEPEQPPTTYPTLTSSSSEG------RNQRTSGSVLHLGCITIACPRPSILAYHSKTAVD 204
Query: 153 LFFAIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 210
FFAIWFV+GNVW+F R S Q APN++ LC++ LA + + Y+ PF++ +CCC P
Sbjct: 205 CFFAIWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCAAICCCFP 264
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS------------NL-EAGNSAPA 257
+ SVL ++G + +GA+ + I LP++++K S NL E G P
Sbjct: 265 CLISVLRLQEDLGQS-RGATQELIDALPTYKFKPKRSKNWVLDHASSSENLSEGGILGPG 323
Query: 258 N--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL KY + +E+R+LPC+H+FH++CVD+WL+I + CPLCK E+
Sbjct: 324 TKKERIVSAEDAVCCICLTKYGDDDELRELPCNHLFHVQCVDKWLKINAVCPLCKTEI 381
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 170/337 (50%), Gaps = 61/337 (18%)
Query: 23 SSPPATEDRMARNRPAARAGAPSFLIRTAMRISRAST-----WMTLELLALLVQISIITF 77
SS T+ + N P AR R R+ R + W+++EL L QI
Sbjct: 55 SSSGTTDASYSPNAPLAR--------RDDNRLRRQQSLNSGFWISIELAVNLSQIIAAIC 106
Query: 78 TLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ-------------------LYA 118
LS+SK E P P+ W++GY IGC+ +L LY RY Q +
Sbjct: 107 VLSVSKNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLATVQGSNQNYVPDNSFES 166
Query: 119 SQVDGFSLPDVEQQ----------RSS---EDSRFSHLMNKCRTSLELFFAIWFVMGNVW 165
S G S P V + R++ + R + + +L+ FFA+WFV+GNVW
Sbjct: 167 SSFTGISPPPVSEAGVVTVSNGVLRNNVVITNPRAQAFADHFKMALDCFFAVWFVVGNVW 226
Query: 166 VFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAA 225
VF S APNL+ LCI+ L ++ + Y+ PF+L L+CCC+P I S++G+ ++
Sbjct: 227 VFGGH-SSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISLMGFREDLDE- 284
Query: 226 DKGASDDQISRLPSWRYKR--------------VDSNLEAGNSAPANEDPECCICLAKYK 271
++GA+ D I+ L ++R++ V + A + ED CCICLA+Y
Sbjct: 285 NRGATSDAINALGTYRFRSKKPRNGEANEGGGGVFAPGTDKERAVSAEDAVCCICLARYV 344
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ +++R LPC H FH CVD+WL+I + CPLCK E++
Sbjct: 345 DNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEID 381
>gi|414880831|tpg|DAA57962.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 469
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+ LEL ++ Q+ + T ++ S E P WP+R+W+ Y++G +LSL LLY R+R +S
Sbjct: 185 WLALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWRHRHSSSS 244
Query: 120 QVDGFSLPDVEQQRSSE-DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
G D+E +++ S+LMNK R LELFFA+WFVMGNVWVFD+R GSFQRAP
Sbjct: 245 SSAGGGRGDLEMHGANDAPGNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAP 304
Query: 179 NLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 238
L+ LC+SLLAWNA+ YS PFLLFLLLCC VP + LGYNMN + +GASD+Q++ LP
Sbjct: 305 RLYALCVSLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALP 364
Query: 239 SWRYKRVD 246
WR+K D
Sbjct: 365 RWRFKEPD 372
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 47/294 (15%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR--YRQLY 117
W++ EL+ +VQI F L S+ E P P+ WI+GY IGC+ S+ L+ R +R
Sbjct: 266 WISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRP 325
Query: 118 ASQ---VDGFSLPDVEQQRSSED-------------------SRFSHLMNKCRTSLELFF 155
+ Q + P++ +SSE R S L +T+++ FF
Sbjct: 326 SEQEPEQPPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFF 385
Query: 156 AIWFVMGNVWVFD--SRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 213
A+WFV+GNVW+F S Q APN++ LC++ LA + + Y+ PF++ +CCC P +
Sbjct: 386 AVWFVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLI 445
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL------------EAGNSAPAN--- 258
S+L ++G +GA+ + I LP++++K S + E G P
Sbjct: 446 SLLRLQEDLGHT-RGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKE 504
Query: 259 -----EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 505 RIVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 558
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 60/304 (19%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL+ + QI LS+S+ E+P P+ WIVGY GC+ +L +LY R+R S
Sbjct: 110 WISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQS 169
Query: 120 Q-----------------------VDGFSLPDVEQQRSSED------------SRFSHLM 144
+ + D E ++ SR + L+
Sbjct: 170 NEQDTSQASQGSSGSNPPDRSYNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLV 229
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 204
+ + +L+ FFA+WFV+GNVW+F S AP L+ LCI L ++ + Y+ PF+L
Sbjct: 230 DHFKMALDCFFAVWFVVGNVWIFGGHT-SPSDAPQLYRLCIVFLTFSCIGYAMPFILCAT 288
Query: 205 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN------ 258
+CCC+P I SVLG + + ++GA+ + I+ LP +++K N E G+ N
Sbjct: 289 ICCCLPCIISVLGIREDF-SQNRGATVESINALPIFKFKL--KNNENGDDQDVNAAIDEG 345
Query: 259 ---------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
ED CCICLAKY + +E+R+LPCSH FH+ CVD+WL+I + CPLC
Sbjct: 346 GILAAGTEKERMISGEDAVCCICLAKYADDDELRELPCSHFFHVMCVDKWLKINATCPLC 405
Query: 304 KQEL 307
K E+
Sbjct: 406 KNEV 409
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 47/294 (15%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR--YRQLY 117
W++ EL+ +VQI F L S+ E P P+ WI+GY IGC+ S+ L+ R +R
Sbjct: 90 WISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRP 149
Query: 118 ASQVDG---FSLPDVEQQRSSEDS-------------------RFSHLMNKCRTSLELFF 155
+ Q + P++ +SSE R S L +T+++ FF
Sbjct: 150 SEQEPEQPPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFF 209
Query: 156 AIWFVMGNVWVFD--SRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 213
A+WFV+GNVW+F S Q APN++ LC++ LA + + Y+ PF++ +CCC P +
Sbjct: 210 AVWFVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLI 269
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL------------EAGNSAPAN--- 258
S+L ++G +GA+ + I LP++++K S + E G P
Sbjct: 270 SLLRLQEDLGHT-RGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKE 328
Query: 259 -----EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 329 RIVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 157/295 (53%), Gaps = 48/295 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----RQ 115
W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY R
Sbjct: 89 WISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRH 148
Query: 116 L-YASQVDGFSLPDVEQQRSSEDS-------------------RFSHLMNKCRTSLELFF 155
L Q + P + +SSE R S L +T ++ FF
Sbjct: 149 LDQEPQQPPTTYPTLIPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDCFF 208
Query: 156 AIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 213
A+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+ PF++ +CCC P +
Sbjct: 209 AVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLI 268
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYK--RV-----------DSNLEAGNSAPAN-- 258
SVL ++G ++GA+ + I LP++++K RV + E G P
Sbjct: 269 SVLRLQEDLGQ-NRGATQELIDALPTYKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKK 327
Query: 259 ------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 328 ERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 159/307 (51%), Gaps = 61/307 (19%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA- 118
W+++EL + QI LS+S+ E P P+ +W+ GY GCL +L LLY RY
Sbjct: 78 WISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRNGT 137
Query: 119 ------------SQVDGFSLP------------------DVEQQRSSEDSR-------FS 141
S SLP +V + R+ R S
Sbjct: 138 TQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVEPRARSRGRDVDSASDNS 197
Query: 142 HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLL 201
L+ K + +L+ FFA+WFV+GNVW+F S + APNL+ LCI L ++ + Y+ PF+L
Sbjct: 198 GLVEKFKIALDCFFAVWFVVGNVWIFGGHSSS-REAPNLYRLCIVFLTFSCIGYAMPFIL 256
Query: 202 FLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR---------VDSNLEAG 252
+CCC+P I ++LG+ A ++GAS + I+ LP++++K +S+ E
Sbjct: 257 CATICCCLPCIIALLGFREEQ-AQNRGASAEVIAALPTYKFKSRPSSESKDGSESDSEGS 315
Query: 253 NS------------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
N A + +D CCICLA+Y++ E +R+L C+H FH+ CVD+WL+I + C
Sbjct: 316 NEGGFVAAGTDKERAVSADDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKWLKINASC 375
Query: 301 PLCKQEL 307
PLCK ++
Sbjct: 376 PLCKLDV 382
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 172/332 (51%), Gaps = 55/332 (16%)
Query: 29 EDRMARN--------RPAARAGAPSFLIRTAMRISRASTWMTLELLALLVQISIITFTLS 80
DR+A + R + R G + R + W+ +EL+ + QI LS
Sbjct: 26 HDRLANDVDFGALNSRTSRRRGDTTRSSRQHRSPLNSGLWICVELVITVSQIVASVVVLS 85
Query: 81 ISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY------RQLYASQV--------DGFSL 126
+SK E P P+ WIVG+ GC+ +L LLY RY R+L +S G L
Sbjct: 86 LSKHEHPRAPLFAWIVGFASGCVATLPLLYWRYYHNCLVRELESSSQASLRSNDPSGTLL 145
Query: 127 PDVEQQ---------RSSEDS-----RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFG 172
D RS+++S R L+ + +++ FFAIWF++GNVW+F
Sbjct: 146 SDSTTNGGEDVPASSRSNQESWLMNARLKLLVEYFKIAVDCFFAIWFIVGNVWIFGGH-S 204
Query: 173 SFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 232
S +APNL+ LC+ L ++ + Y+ PF+L +CCC+P I S+LG +M A GAS +
Sbjct: 205 SADQAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDM-AQTPGASSE 263
Query: 233 QISRLPSWRYKRV------DSN---LEAGNSAPA--------NEDPECCICLAKYKEKEE 275
I+ LP++++K +SN E G A ED CCICLAKY+ +E
Sbjct: 264 SINSLPTYKFKMKKNKSKGESNSAVSEGGVVASGTEKERMISGEDAACCICLAKYENNDE 323
Query: 276 VRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+R+L CSH+FH CVD+WL+I + CPLCK E+
Sbjct: 324 LRELLCSHLFHKDCVDKWLKINALCPLCKSEV 355
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 157/293 (53%), Gaps = 49/293 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL+ L QI LS+S+ E P P+ W++GY IGC+ +L LY R+
Sbjct: 87 WISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLIGYTIGCVATLPHLYWRFLHRNRQ 146
Query: 120 QVDGFSLPDVEQQR---------------SSE--DS------------RFSHLMNKCRTS 150
+ S V +R SE DS R L+ + +
Sbjct: 147 NTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNGGVARIASPRVYALVACFKLA 206
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 210
L+ FFA+WFV+GNVW+F R S APNL+ LCI LA+ + Y+ PF+L ++CCC+P
Sbjct: 207 LDCFFAVWFVVGNVWIFGGRT-SLHDAPNLYRLCIVFLAFGFIGYALPFILCTMICCCLP 265
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN------------ 258
I S++G + ++ ++GA+ + I L +++++ + G + N
Sbjct: 266 CIISMMGIHEDLDF-NRGATAEAIDALVAYKFQS--KKFQDGEAGEDNGGVLAAGTDKER 322
Query: 259 ----EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL+K+ E++R+LPC+H+FHL+CVD+WL+I + CPLCK +L
Sbjct: 323 TISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDKWLKINALCPLCKADL 375
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 154/295 (52%), Gaps = 48/295 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY--RQLY 117
W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY R +
Sbjct: 90 WISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYTVGCIASLPLIYWRYVHRNRH 149
Query: 118 ASQVDGFSLPDVEQQRSSEDS----------------------RFSHLMNKCRTSLELFF 155
Q S+ S R S L +T+++ FF
Sbjct: 150 LDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLRLGCIAISCPRLSVLAYHFKTAVDCFF 209
Query: 156 AIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 213
A+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+ PF++ +CCC P +
Sbjct: 210 AVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLI 269
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYK-RVDSNL------------EAGNSAPAN-- 258
SVL ++G ++GA+ + I LP++++K + + N E G P
Sbjct: 270 SVLRLQEDLGQ-NRGATQELIDALPTYKFKPKRNKNWGIDHASSSEHLDEGGILGPGTKK 328
Query: 259 ------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 329 ERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 383
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 148/289 (51%), Gaps = 43/289 (14%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL + QI L +S+ E P P+ +W+ GY GCL +L LLY RY Y
Sbjct: 12 WVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMR 71
Query: 120 QVDGFSL---------------------PDVEQQRSSEDSRFSHLMNKCRTSLELFFAIW 158
+ S P + + S + + +L+ FFAIW
Sbjct: 72 TREPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFAIW 131
Query: 159 FVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGY 218
FV+GNVW+F + APNL+ LCI LL ++ + Y+ PF+L +CCC+P I ++LG+
Sbjct: 132 FVVGNVWIFGGHSAA-HDAPNLYRLCIVLLTFSCIGYAMPFILCATICCCLPCIIALLGF 190
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---------------- 262
+ +GAS + I+ LP++++K SN N + D E
Sbjct: 191 REDQNQP-RGASQEAIAALPTYKFKAKASNESKLNKDGNDSDSEGAWVAAGTEKERWVSA 249
Query: 263 ----CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
CCICL KYK+ E+R+L C+H FH++CVD+WL+I + CPLCK ++
Sbjct: 250 DDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 298
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 157/295 (53%), Gaps = 48/295 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----RQ 115
W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY R
Sbjct: 89 WISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRH 148
Query: 116 L-YASQVDGFSLPDVEQQRSSEDS-------------------RFSHLMNKCRTSLELFF 155
L Q + P + +SSE R S L +T ++ FF
Sbjct: 149 LDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDCFF 208
Query: 156 AIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 213
A+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+ PF++ +CCC P +
Sbjct: 209 AVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLI 268
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYK--RV-----------DSNLEAGNSAPAN-- 258
SVL ++G ++GA+ + I LP++++K RV + E G P
Sbjct: 269 SVLRLQEDLGQ-NRGATQELIDALPTYKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKK 327
Query: 259 ------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 328 ERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 149/293 (50%), Gaps = 47/293 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++EL + QI L +S+ E P P+ +W+ GY GCL +L LLY RY Y
Sbjct: 12 WVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMR 71
Query: 120 QVDGFSL---------------------PDVEQQRSSEDSRFSHLMNKCRTSLELFFAIW 158
+ S P + + S + + +L+ FFAIW
Sbjct: 72 TREPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFAIW 131
Query: 159 FVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGY 218
FV+GNVW+F + APNL+ LCI LL ++ + Y+ PF+L +CCC+P I ++LG+
Sbjct: 132 FVVGNVWIFGGHSAA-HDAPNLYRLCIVLLTFSCIGYAMPFILCATICCCLPCIIALLGF 190
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNL----------------EAGNSAPANE--- 259
+ +GAS + I+ LP++++K SN E G A E
Sbjct: 191 REDQNQP-RGASQEAIAALPTYKFKAKASNESKLNKDGNDSDSEGAGEGGWVAAGTEKER 249
Query: 260 -----DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
D CCICL KYK+ E+R+L C+H FH++CVD+WL+I + CPLCK ++
Sbjct: 250 WVSADDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 302
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 157/305 (51%), Gaps = 62/305 (20%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++E++ I LS+S+ E P P+ W+VGY GC SL +L+ RY +
Sbjct: 111 WISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHD 170
Query: 120 QVDGFS-------------------------------LPDVE------QQRSSEDSRFSH 142
G + LPD + ++R S
Sbjct: 171 GEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSV 230
Query: 143 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 202
L + + +L+ FFA+WFV+GNVW+F SF APNL+ LCI L ++ + Y+ PF+L
Sbjct: 231 LADYYKMALDCFFAVWFVVGNVWIFGGH-SSFTAAPNLYRLCIVFLTFSCIGYAMPFILC 289
Query: 203 LLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNS-------- 254
++CCC+P I S+LG+ ++ +GAS + I+ LP++++K + +GNS
Sbjct: 290 AMICCCLPCIISILGHG-DLSQV-RGASAESINALPTYKFKLKKNG--SGNSGEISSGVE 345
Query: 255 ------------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
A + ED CCICL +Y + +E+R+LPCSH FH +CVD+WL+I + CPL
Sbjct: 346 GGVVGAGTEKERAISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKINASCPL 405
Query: 303 CKQEL 307
CK E+
Sbjct: 406 CKCEV 410
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 157/305 (51%), Gaps = 62/305 (20%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W+++E++ I LS+S+ E P P+ W+VGY GC SL +L+ RY +
Sbjct: 91 WISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHD 150
Query: 120 QVDGFS-------------------------------LPDVE------QQRSSEDSRFSH 142
G + LPD + ++R S
Sbjct: 151 GEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSV 210
Query: 143 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 202
L + + +L+ FFA+WFV+GNVW+F SF APNL+ LCI L ++ + Y+ PF+L
Sbjct: 211 LADYYKMALDCFFAVWFVVGNVWIFGGH-SSFTAAPNLYRLCIVFLTFSCIGYAMPFILC 269
Query: 203 LLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNS-------- 254
++CCC+P I S+LG+ ++ +GAS + I+ LP++++K + +GNS
Sbjct: 270 AMICCCLPCIISILGHG-DLSQV-RGASAESINALPTYKFKLKKNG--SGNSGEISSGVE 325
Query: 255 ------------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
A + ED CCICL +Y + +E+R+LPCSH FH +CVD+WL+I + CPL
Sbjct: 326 GGVVGAGTEKERAISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLKINASCPL 385
Query: 303 CKQEL 307
CK E+
Sbjct: 386 CKCEV 390
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 173/366 (47%), Gaps = 81/366 (22%)
Query: 14 NSSTTVPY---SSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELLALLV 70
N S T P +SSP R R+ R F + W+++EL L
Sbjct: 66 NGSQTPPNGSSASSPSQGNTRSPRSESMGRRNLSPF---------NSGFWISIELAFTLT 116
Query: 71 QISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----------------- 113
QI T L +S+ E P P+ W+VGY GC+ SL ++Y R+
Sbjct: 117 QIIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFIHRNRGSEAVVQVNQAS 176
Query: 114 --------RQLYAS--------QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAI 157
+ Y + D S+P + + ++R +M+ +T+L+ FF +
Sbjct: 177 PHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTANTRMGLIMDHFKTALDCFFGV 236
Query: 158 WFVMGNVWVFDSRFGSFQRAPNLH----------------VLCISLLAWNALSYSFPFLL 201
FV+GNVW+F S APNL+ LCI L + ++Y+ PF+L
Sbjct: 237 LFVVGNVWIFGGH-ASVSDAPNLYRYFLNPDVKTLQISFESLCIVYLTLSCINYAMPFIL 295
Query: 202 FLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--------NLEAGN 253
++CCC+P I SVLG ++ +GAS++ I+ LP++++K + N E G
Sbjct: 296 CAMICCCLPCIISVLGIREDLNQV-RGASEESINTLPTYKFKVTNDENGCTGQRNSEEGG 354
Query: 254 SAP---------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ ED CCICLA+Y E +E+R+LPC+H FH CVD+WL+I + CPLCK
Sbjct: 355 IVAIGTEKERVISGEDAVCCICLARYLEDDEMRELPCAHFFHAVCVDRWLKINATCPLCK 414
Query: 305 QE-LER 309
E LER
Sbjct: 415 FEILER 420
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 163/295 (55%), Gaps = 49/295 (16%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ---- 115
W+++EL+ L QI LS+S+ E P P+ W++GY IGC+ L LY RY
Sbjct: 87 WISIELIVNLSQIVAAVVVLSVSRNEHPQAPLFTWLLGYTIGCIAILPHLYWRYLHRNRL 146
Query: 116 -------------LYASQVDGFSL---PDVEQQRSSEDS-------------RFSHLMNK 146
+ S+++ +++ P + +S RF ++
Sbjct: 147 DMEQEMPPQRSPGMNISEINSYAVVSSPHASEAVEGANSTGVSRTNLPMASPRFYAMVAC 206
Query: 147 CRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLC 206
+ L+ FFA+WFV+GNVW+F SR S APNL+ +C+ LA+ + Y+ PF+L ++C
Sbjct: 207 FKLVLDCFFAVWFVVGNVWMFGSR-SSAHDAPNLYRICLVFLAFGFIGYALPFILCTMIC 265
Query: 207 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY--KRVD---------SNLEAGNSA 255
CC+P I SVLG + ++ ++GA+ + I+ L ++++ KRV L AG
Sbjct: 266 CCLPCIISVLGVHEDLD-MNRGATTEAINTLVAYKFQSKRVHDGDVGGDGGGVLAAGTDK 324
Query: 256 P---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ ED CCICL+K+ E++R+LPC+H+FH++C+D+WL+I + CPLCK E+
Sbjct: 325 ERTISAEDAICCICLSKFSNNEDLRELPCAHVFHMECIDKWLQINALCPLCKAEI 379
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 21/199 (10%)
Query: 130 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 189
++++ R L+ + +L+ FFA+WFV+GNVW+F S APNL+ LCI L
Sbjct: 328 QEEQYEAMGRLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSS-SEAPNLYRLCIVFLT 386
Query: 190 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK---RVD 246
++ + Y+ PF+L +CCC+P I S+LG+ ++ +GA+ + I+ LP++++K +
Sbjct: 387 FSCIGYAMPFILCATICCCLPCIISILGFREDL-TQTRGATSESINALPTYKFKLKKNRN 445
Query: 247 SNLEAGNSAPA----------------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
+ GNS ED CCICLAKY +E+R+LPCSH FH +CV
Sbjct: 446 GDDREGNSGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECV 505
Query: 291 DQWLRILSCCPLCKQELER 309
D+WL+I + CPLCK+E+++
Sbjct: 506 DKWLKINALCPLCKREVKK 524
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ 115
W+++EL + QI LS+S+ E P P+ WIVGY GC+ +L +LY R+R
Sbjct: 108 WISIELALTVSQIIASXVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRH 163
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 19/175 (10%)
Query: 150 SLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV 209
+L+ FFA+WFV+GNVW+F R S APNL+ LCI L ++ + Y+ PF+L ++CCC+
Sbjct: 2 ALDCFFAVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCL 60
Query: 210 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN----------- 258
P I SV+G+ + +GA+ + I+ LP++++K +GN A
Sbjct: 61 PCIISVMGFREDTNNT-RGATSESINSLPTYKFKTKKRRHSSGNEAEGQDGGIVAAGTDK 119
Query: 259 ------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICLAKY +E+R+LPC+H FH +CVD+WL+I + CPLCK E+
Sbjct: 120 ERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEI 174
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 24/192 (12%)
Query: 139 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYS 196
R S L +T+++ FFA+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+
Sbjct: 95 RPSILAYHSKTAVDCFFAVWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVGYA 154
Query: 197 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--------- 247
PF++ +CCC P + SVL ++G +GA+ + I LP++++K S
Sbjct: 155 VPFIMCAAICCCFPCLISVLRLQEDLGQT-RGATQELIEALPTYKFKPRRSKNWGLDYAS 213
Query: 248 ---NL-EAGNSAPAN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR 295
NL E G P ED CCICL KY + +E+R+LPC+H+FH++CVD+WL+
Sbjct: 214 SSENLSEGGILGPGTKKERTVSAEDAVCCICLTKYGDDDELRELPCTHLFHVQCVDKWLK 273
Query: 296 ILSCCPLCKQEL 307
I + CPLCK ++
Sbjct: 274 INAVCPLCKTDI 285
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 137/269 (50%), Gaps = 28/269 (10%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS 119
W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY
Sbjct: 89 WISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVH-RNR 147
Query: 120 QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPN 179
+D + S+ S N + + L + D+ Q APN
Sbjct: 148 HLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPSISSDA-----QDAPN 202
Query: 180 LHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 239
++ LC++ LA + + Y+ PF++ +CCC P + SVL ++G ++GA+ + I LP+
Sbjct: 203 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQ-NRGATQELIDALPT 261
Query: 240 WRYK--RV-----------DSNLEAGNSAPAN--------EDPECCICLAKYKEKEEVRK 278
+++K RV + E G P ED CCICL KY + +E+R+
Sbjct: 262 YKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRE 321
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 322 LPCTHFFHVQCVDKWLKINAVCPLCKTEI 350
>gi|297743323|emb|CBI36190.3| unnamed protein product [Vitis vinifera]
Length = 920
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 27/263 (10%)
Query: 56 RASTWMTLELLALLVQISIITFTLSISK-KESPIWPMRIWIVGYDIGCLLSLLLLYGRYR 114
+ W++L+ + ++QI LS+SK P + + W+VGY GC+L L LLY RY
Sbjct: 39 ESGLWISLQFILSVIQIVASIVVLSLSKLNGDPDYKLFSWVVGYACGCVLMLPLLYCRYI 98
Query: 115 QLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF 174
+ ++ F + R ++ + SL FFA+WFV+GNVWVF S +
Sbjct: 99 LILVKKL--FLI-----------CRLYGIVEVLKMSLSCFFAVWFVLGNVWVFGSS-STG 144
Query: 175 QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LISSVLGYNMNMGAADKGASDDQ 233
+ L LC+ LA + Y+ P C +P LI L A + D
Sbjct: 145 KDDTKLETLCLVFLASGCIMYAMPVFRCAAFCLLLPFLILPTLASPQEQ--AREANPDYS 202
Query: 234 ISRLPSWRYKRVDSN------LEAGNS---APANEDPECCICLAKYKEKEEVRKLPCSHM 284
+ LP++ +K ++ L AG A + ED CCICL KY + +EVR+LPCSH
Sbjct: 203 FNALPTYNFKLKENGTGESGVLAAGTDKERAISGEDAVCCICLGKYADNDEVRELPCSHF 262
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FH++CVD+WL+I CPLC+ EL
Sbjct: 263 FHVECVDKWLKINPRCPLCQSEL 285
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
+ +L FF +W V+G VW+ + F A L LC+ L Y+ P + F LC
Sbjct: 351 KMTLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFASLCL 410
Query: 208 CVP-LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-------- 258
+P LI + L ++ +GA+ + I+ LP++++K ++ G A
Sbjct: 411 FLPCLICATL---VSPHEKPRGATPESINELPTYKFKSKENGRGEGGVWAAGTIKERTLS 467
Query: 259 -EDPECCICLAKYKEKEEVRKLPC-SHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL +Y + EE+R+LPC SH FH +CVDQWL+I +CCPLC+ EL
Sbjct: 468 EEDAVCCICLGQYADNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSEL 518
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 83/162 (51%), Gaps = 20/162 (12%)
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
+ L FFA WFV+GN+W +R S A L +LC LL + Y+ P + LL
Sbjct: 743 KMVLGCFFAFWFVLGNIWA--ARVSS--DAEKLDMLCQLLLKTACIMYAIPAIGCFLL-- 796
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 267
+ISS L N+ K +D +R A + ED CCICL
Sbjct: 797 -PRMISSALMAPRNL---TKNGTDAVGVLAAGTEQER----------AISEEDAVCCICL 842
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
KY + +E+R+LPC H FH +CVD+WL+I + CPLC+ E+ R
Sbjct: 843 EKYVDNDELRELPCGHFFHKECVDEWLKINARCPLCQSEIAR 884
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 130 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 189
E++R+ S +M ++ FF +WFV G+V F S AP L L +LL
Sbjct: 537 EKERTLSGEEVSKVMEVFWLTMSCFFVVWFVFGSVCFFGVS-SSIHDAPILEGLFKALLL 595
Query: 190 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS--DDQISRLPSWRYKRVDS 247
Y+ P + C + L +G S D + LP++++K ++
Sbjct: 596 SGCTIYAMPGIAIASYCLFFSWLILSLLLLKLR-EKHRGTSTPDSPPNVLPTYKFKSKEN 654
Query: 248 N----LEAG----NSAPANEDPECCICLAKYKEKEEVRKLPC-SHMFHLKCVDQWLRILS 298
L AG +++ + ED CCICL Y + EE+R+LPC SH FH++CVD+WL+I +
Sbjct: 655 GGGVLLAAGTKKKSASLSGEDVVCCICLGNYADNEELRELPCCSHFFHVECVDKWLKIKA 714
Query: 299 CCPLCKQE 306
CPLC+ E
Sbjct: 715 RCPLCQSE 722
>gi|147815560|emb|CAN70531.1| hypothetical protein VITISV_010219 [Vitis vinifera]
Length = 305
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 131/263 (49%), Gaps = 31/263 (11%)
Query: 56 RASTWMTLELLALLVQISIITFTLSISKKESPI-WPMRIWIVGYDIGCLLSLLLLYGRYR 114
+ W++L+ + ++QI LS+SK + + W+VGY GC+L L LLY RY
Sbjct: 37 ESGLWISLQFILSVIQIVASIVVLSLSKXNGDXDYKLFSWVVGYACGCVLMLPLLYCRYI 96
Query: 115 QLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF 174
R + + + ++ + SL FFA+WFV+GNVWVF S +
Sbjct: 97 V-----------------RGTVNLQLYGIVEVLKMSLSCFFAVWFVLGNVWVFGSS-STG 138
Query: 175 QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LISSVLGYNMNMGAADKGASDDQ 233
+ L LC+ LA + Y+ P C +P LI L A + D
Sbjct: 139 KDDTKLETLCLVFLASGCIMYAMPVXRCAAFCLLLPFLILPTLASPQEQ--AREANPDYS 196
Query: 234 ISRLPSWRYKRVDSN------LEAGNS---APANEDPECCICLAKYKEKEEVRKLPCSHM 284
+ LP++ +K ++ L AG A + ED CCICL KY + +EVR+LPCSH
Sbjct: 197 FNALPTYNFKLKENGTGESGVLAAGTDKERAISGEDAVCCICLGKYADNDEVRELPCSHF 256
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FH++CVD+WL+I CPLC+ EL
Sbjct: 257 FHVECVDKWLKINPRCPLCQSEL 279
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 41/299 (13%)
Query: 44 PSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R TA R + W + L+LL L I + L +S ESP P+R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELF 154
I GY + C+L ++ + YR + Q G S+ E++ S S + + T +F
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHG-QRGGPSMAADEERGSDGSSSIAKHLESGNT---MF 169
Query: 155 FAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVP 210
IW+++G WV + AP L+ LCI LA++ F ++ + +CCC+P
Sbjct: 170 SFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLP 229
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSA 255
I ++L Y ++ +GAS+D I ++P ++++R++ +E G +
Sbjct: 230 CIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSSGGMMIECGTNQ 285
Query: 256 P-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
P A ED ECCICL+ Y + E+R+LPC+H FH C+D+WL I + CPLCK + +
Sbjct: 286 PIEKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHINATCPLCKLNVRK 344
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 153/302 (50%), Gaps = 41/302 (13%)
Query: 44 PSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R TA R + W + L+LL L I + L +S ESP P+R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELF 154
I GY + C+L ++ + YR + Q G S+ E++ S S + + T +F
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHG-QRGGPSMAADEERGSDGSSSIAKHLESGNT---MF 169
Query: 155 FAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVP 210
IW+++G WV + AP L+ LCI LA++ F ++ + +CCC+P
Sbjct: 170 SFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLP 229
Query: 211 LISSVLGYNMNMGA---ADKGASDDQISRLPSWRYKRVDSN---------------LEAG 252
I ++L Y ++ +GAS+D I ++P ++++R++ +E G
Sbjct: 230 CIIAIL-YAVSDQVWLLTYEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSSGGMMIECG 288
Query: 253 NSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ P A ED ECCICL+ Y + E+R+LPC+H FH C+D+WL I + CPLCK +
Sbjct: 289 TNQPIEKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHINATCPLCKLNV 348
Query: 308 ER 309
+
Sbjct: 349 RK 350
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 144/281 (51%), Gaps = 45/281 (16%)
Query: 63 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-RQLYASQV 121
L++L L + I L +S KE P P+R+WI+GY + CL + + Y R+L+ +
Sbjct: 86 LDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVWIIGYSLQCLFHIGCVIFEYKRRLFGTSA 145
Query: 122 --------------DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 167
G S+ D +QR ++ + ++ + ++ +F IW+++G WV
Sbjct: 146 RLEASDSTSVSESDGGDSVDDGVEQRGNDGD--TCVVKQLESANTMFSFIWWIVGFYWVT 203
Query: 168 DSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMG 223
+P L+ LCI+ LA++ + + L+ L +CCC+P I +L Y M
Sbjct: 204 AGGQNLTNDSPQLYWLCITFLAFDVIFVIICIAVACLIGLAICCCLPCIIGIL-YAMT-- 260
Query: 224 AADKGASDDQISRLPSWRYKR------VDSNLEAGNSAP--------------ANEDPEC 263
+GA+ ++I +LP ++++R V+++ +A ++ED EC
Sbjct: 261 -DREGATQEEIEQLPMYKFRRIGDFEKVNADFQATFGGMMTECEIDTPTERRLSHEDAEC 319
Query: 264 CICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
CICL+ Y++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 320 CICLSAYEDGTELRQLPCQHHFHSTCIDKWLYINATCPLCK 360
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 153/316 (48%), Gaps = 56/316 (17%)
Query: 44 PSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R TA R + W + L+LL L I L +S ESP P+RIW
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILTTAVVLVLSGDESPSVPLRIW 113
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSR--------------- 139
I GY + C++ ++ + YR + + G S +++R ++ S
Sbjct: 114 IAGYAVQCVVHMVCVAIEYRVRHGQR--GGSSMAADEERGTDGSSSSIDDAGESGPHGRI 171
Query: 140 --FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
F+ + ++ +F IW+++G WV AP L+ LCI LA++ F
Sbjct: 172 GYFASVAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVF 231
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++RVD
Sbjct: 232 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRRVDEPEKQSV 287
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+W
Sbjct: 288 TMIESSGGIMIECGTNQPIEKVLAAEDAECCICLSVYDDGAELRELPCGHHFHCACIDKW 347
Query: 294 LRILSCCPLCKQELER 309
L I + CPLCK + +
Sbjct: 348 LHINATCPLCKLNVRK 363
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 149/311 (47%), Gaps = 55/311 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL + I++ L +S+ E+ P+R W
Sbjct: 57 PSMLVREAAAEHLEERQADWAYSRPVVALDLLWNISFITVAAVVLVLSRNENSPMPLRTW 116
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP-----------------DVEQQRSSED 137
+ GY + C++ ++ + YR + SQ G +P E Q D
Sbjct: 117 VAGYALQCIVHMVCVAVEYR-MRRSQRGGGPVPADEERGSDVSSSSSDEDASENQLRGRD 175
Query: 138 SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
+ + L ++ +F IW+++G W+ + AP L+ LCI LA++ F
Sbjct: 176 TDYVSLAKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVF 235
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++RVD
Sbjct: 236 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRRVDEPEKDSA 291
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
E G + P A ED ECCIC++ Y + E+R+LPC H FH C+D+W
Sbjct: 292 GATESSGGIMTECGTNQPIEKALAAEDAECCICISAYDDGAELRELPCGHHFHCACIDKW 351
Query: 294 LRILSCCPLCK 304
L I + CPLCK
Sbjct: 352 LHINATCPLCK 362
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 149/311 (47%), Gaps = 55/311 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL + I++ L +S+ E+ P+R W
Sbjct: 57 PSMLVREAAAEHLEERQADWAYSRPVVALDLLWNISFITVAAVVLVLSRNENSPMPLRTW 116
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP-----------------DVEQQRSSED 137
+ GY + C++ ++ + YR + SQ G +P E Q D
Sbjct: 117 VAGYALQCIVHMVCVAVEYR-MRRSQRGGGPVPADEERGSDVSSSSSDEDASENQLRGRD 175
Query: 138 SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
+ + L ++ +F IW+++G W+ + AP L+ LCI LA++ F
Sbjct: 176 TDYVSLAKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVF 235
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++RVD
Sbjct: 236 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRRVDEPEKDSA 291
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
E G + P A ED ECCIC++ Y + E+R+LPC H FH C+D+W
Sbjct: 292 DATESSGGIMTECGTNQPIEKALAAEDAECCICISAYDDGAELRELPCGHHFHCACIDKW 351
Query: 294 LRILSCCPLCK 304
L I + CPLCK
Sbjct: 352 LHINATCPLCK 362
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 151/318 (47%), Gaps = 56/318 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL L I++ L +S+ E P+R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYA---SQVDGFSLPDVEQQR----------------SS 135
+ GY + C++ ++ + YR + S V G + DVE+
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQRGSAVAGAAPADVERGSDASSSSSDEDDRELDLHG 178
Query: 136 EDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY 195
+ ++ + ++ +F IW+++G W+ Q AP L+ LCI LA++
Sbjct: 179 RRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFV 238
Query: 196 SFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN--- 248
F ++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R D
Sbjct: 239 VFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQ 294
Query: 249 ------------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D
Sbjct: 295 DVDPMGPFGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDSAELRELPCGHHFHCTCID 354
Query: 292 QWLRILSCCPLCKQELER 309
+WL I + CPLCK + +
Sbjct: 355 KWLHINATCPLCKYNIRK 372
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 161/330 (48%), Gaps = 47/330 (14%)
Query: 17 TTVPYSSSPPATEDRMARNRPAA----RAGAPSFLIR-TAMRI--SRASTWMTLELLALL 69
+T Y+ +P R+ R A R G PS L+R TA R R + W + + LL
Sbjct: 2 STPNYAHAPLLRPRRVGRTPVLALLLGRRG-PSVLVRETAARELEERRADWGYSKPVVLL 60
Query: 70 ------VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLL--SLLLLYGRYRQLYAS-- 119
V + + L S E+P P+R+WI GY + CL+ +L+LL R R +
Sbjct: 61 DVTWNTVFVVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNVIGGGR 120
Query: 120 QVDGFSLPDVEQQRSSEDSRF-----SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF 174
+ D SL DV +D F S +C + + +W+++G WV +
Sbjct: 121 ERDEESLDDVNDSEEDDDVEFLNSSSSGFAKRCSSLNTMLSLLWWMVGFYWVVNGGDILI 180
Query: 175 QRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 230
Q AP L+ L + LA++ F L+ + LCCC+P I +L Y + A +GAS
Sbjct: 181 QDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIGIL-YAV---AGQEGAS 236
Query: 231 DDQISRLPSWRYK----------RVDSNLEAGNSAPANE------DPECCICLAKYKEKE 274
+ +S LP +R++ + S + NS+ ANE D ECCIC++ Y+++
Sbjct: 237 ESDLSTLPKYRFQVPGNEETPSPKGGSMVPIENSSGANERVLSPEDAECCICISPYEDEA 296
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+ LPC+H FH C+ +WL++ + CPLCK
Sbjct: 297 ELHALPCNHHFHSTCIVKWLKMNATCPLCK 326
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 151/318 (47%), Gaps = 56/318 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL L I++ L +S+ E P+R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYA---SQVDGFSLPDVEQQR----------------SS 135
+ GY + C++ ++ + YR + S V G + DVE+
Sbjct: 119 VAGYALQCVVHMICVAIEYRMRHGQRGSAVAGAAPADVERGSDASSSSSDEDDRELDLHG 178
Query: 136 EDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY 195
+ ++ + ++ +F IW+++G W+ Q AP L+ LCI LA++
Sbjct: 179 RRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFV 238
Query: 196 SFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN--- 248
F ++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R D
Sbjct: 239 VFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQ 294
Query: 249 ------------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D
Sbjct: 295 DVDPMGPFGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDSAELRELPCGHHFHCTCID 354
Query: 292 QWLRILSCCPLCKQELER 309
+WL I + CPLCK + +
Sbjct: 355 KWLHINATCPLCKYNIRK 372
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 157/315 (49%), Gaps = 52/315 (16%)
Query: 35 NRPAARAGAPSFLIR-TAMR--ISRASTW------MTLELL--ALLVQISIITFTLSISK 83
R R G PS L+R TA R R + W ++L+++ A V +S+ +++
Sbjct: 34 GRATGRRG-PSMLVRETAARELDERRADWGYSKPVVSLDMMWNAAFVVVSVTMLLVTV-- 90
Query: 84 KESPIWPMRIWIVGYDIGCLLSLLLLYGRY------------RQLYASQVDGFSLPDVEQ 131
KE P P+RIWI GY + CL+ ++L++ Y Q +++ + D E
Sbjct: 91 KERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTRRERDIESQQQSTEEENVPESDEED 150
Query: 132 QRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWN 191
R+S S S + +C + + +W+++G WV Q AP+L+ L + LA++
Sbjct: 151 DRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVVSGGDVLLQNAPHLYWLAVVFLAFD 210
Query: 192 ALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS 247
F +L L LCCC+P I ++L Y + A +GAS+ + +LP ++++ + +
Sbjct: 211 VFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLIQLPKYKFQMIRN 266
Query: 248 ----NLEAGNSAPAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+EAG P ED ECCICL+ Y++ E+ LPC+H FH C
Sbjct: 267 EEKPGIEAGKMVPVETSSRFLGTERILLPEDAECCICLSPYEDGAELHALPCNHHFHATC 326
Query: 290 VDQWLRILSCCPLCK 304
+ +WL++ + CPLCK
Sbjct: 327 IVKWLKMNATCPLCK 341
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 53/324 (16%)
Query: 31 RMARNRPAARAGAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSI 81
R A R R PS ++R A R S W + L++L ++ L +
Sbjct: 51 RQASGRRLMRE--PSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAATVLVL 108
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLY-------ASQVDG-----FSLP-- 127
S+ E+P P+R+WIVGY + +L + + YR+ A+ V G S P
Sbjct: 109 SRNENPNMPLRLWIVGYALQSVLHVACVCVEYRRRLRHREHSNAAAVSGDGSGDLSSPSM 168
Query: 128 DVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISL 187
D S D + ++ +F IW+V+G WV Q +P L+ LCI+
Sbjct: 169 DGSGHYVSFDDDGISMAKHLESANTMFSFIWWVVGFYWVSADSEALVQDSPLLYWLCIAF 228
Query: 188 LAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK 243
L ++ F ++ + +CCC+P I ++L Y + A +GAS + I +L ++++
Sbjct: 229 LGFDVFFVVFCIALACIIGIAVCCCLPCIIALL-YAV---ADQEGASKEDIEQLSKFKFQ 284
Query: 244 RVDSNLE-AGNSAPA-------------------NEDPECCICLAKYKEKEEVRKLPCSH 283
R ++N + AGN+ A +ED ECCICL+ Y + E+RKLPCSH
Sbjct: 285 RTETNEKHAGNTQGAAGGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELRKLPCSH 344
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FH CVD+WL I + CPLCK +
Sbjct: 345 HFHCACVDKWLHINATCPLCKYNI 368
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 53/310 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL L I + L++S++ESP P+R+W
Sbjct: 59 PSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAFILVAAAVLALSREESPSMPLRLW 118
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQ--------------QRS--SEDS 138
IVGY + C+L + + YR + D E +R+ +
Sbjct: 119 IVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEETGTDGSSSSSDEDAGERAPRGRNG 178
Query: 139 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 198
+ + ++ +F IW+++G WV AP L+ LCI LA++ F
Sbjct: 179 DYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFC 238
Query: 199 F----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN------ 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R+D
Sbjct: 239 VALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRMDEPEKQSVN 294
Query: 249 ---------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL 294
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL
Sbjct: 295 MTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWL 354
Query: 295 RILSCCPLCK 304
I + CPLCK
Sbjct: 355 HINATCPLCK 364
>gi|225442723|ref|XP_002280502.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 295
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 129/259 (49%), Gaps = 25/259 (9%)
Query: 61 MTLELLALLVQISIITFTLSISKKESPIWPMRI-WIVGYDIGCLLSLLLLYGRYRQLYAS 119
++++L+ + Q+ L +S + +P W++GY GC L L LLY RY
Sbjct: 42 LSIQLILTVTQMVASLVVLWVSMAQEHRYPKLFPWVMGYASGCALMLPLLYSRYHIARTL 101
Query: 120 QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPN 179
+ S E + ++ + +L FF +W V+G VW+ + F A
Sbjct: 102 NLG----------SSEEAEKLFGVVRFFKMTLSCFFLVWLVLGIVWIPGALFSIRDDATL 151
Query: 180 LHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LISSVLGYNMNMGAADKGASDDQISRLP 238
L LC+ L Y+ P + F LC +P LI + L ++ +GA+ + I+ LP
Sbjct: 152 LETLCLVLFLSGCFVYAIPGMRFASLCLFLPCLICATL---VSPHEKPRGATPESINELP 208
Query: 239 SWRYKRVDSNLEAGNSAPAN---------EDPECCICLAKYKEKEEVRKLPC-SHMFHLK 288
++++K ++ G A ED CCICL +Y + EE+R+LPC SH FH +
Sbjct: 209 TYKFKSKENGRGEGGVWAAGTIKERTLSEEDAVCCICLGQYADNEELRELPCCSHFFHAE 268
Query: 289 CVDQWLRILSCCPLCKQEL 307
CVDQWL+I +CCPLC+ EL
Sbjct: 269 CVDQWLKIKACCPLCQSEL 287
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 149/299 (49%), Gaps = 41/299 (13%)
Query: 44 PSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R TA R + W + L+LL L I + L S E+P P+RIW
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIW 113
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELF 154
I GY + C+L ++ + YR Q G S+ E++ + S + + T +F
Sbjct: 114 IAGYAVQCVLHIVCVAIEYR-FRHRQRGGPSMAADEERGTDGSSSIAKHLESGNT---MF 169
Query: 155 FAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVP 210
IW+++G WV + AP L+ LCI LA++ F ++ + +CCC+P
Sbjct: 170 SFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLP 229
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSA 255
I ++L Y ++ +GAS+D I ++P ++++ +D +E G +
Sbjct: 230 CIIAIL-YAVS---DQEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSGGIMIECGTNQ 285
Query: 256 P-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
P A ED ECCICL+ Y + ++R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 286 PIEKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLCKLNVRK 344
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 54/316 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL L I++ L +S+ E P+R W
Sbjct: 59 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTW 118
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQ-----------------QRSSED 137
+ GY + C++ ++ + YR + + + P E+ R
Sbjct: 119 VAGYALQCVIHMVCVAIEYRMRHGQRGGAGAAPADEERGSDGSSSSSDEDDRELDRHGRR 178
Query: 138 SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
+ ++ + ++ +F IW+++G W+ + AP L+ LCI LA++ F
Sbjct: 179 TDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVF 238
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R D
Sbjct: 239 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQDV 294
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+W
Sbjct: 295 DPMGPFGGIMTECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCTCIDKW 354
Query: 294 LRILSCCPLCKQELER 309
L I + CPLCK + +
Sbjct: 355 LHINATCPLCKYNIRK 370
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 52/298 (17%)
Query: 55 SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLL 108
R S W + L++L L + + L S E+P P+R WI+GY++ CL +
Sbjct: 73 ERQSEWAYSKPVIVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWIIGYNLQCLFHVGC 132
Query: 109 LYGRYRQLYASQVDGFSLPDV---------------EQQRSSEDSRF---SHLMNKCRTS 150
+ YR+ + Q D F D + +DS+ + L ++
Sbjct: 133 VIAEYRRRHRRQSDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDSQIEPGTSLAKHLESA 192
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNA----LSYSFPFLLFLLLC 206
+F +W+++G WV Q +P L+ LC++ LA++ L + L+ + +C
Sbjct: 193 NAIFSFVWWIIGFYWVTADSEELSQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVC 252
Query: 207 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY------KRVDSNL---------EA 251
CC+P I +VL + G GASD++I RLP +++ ++V+ + +
Sbjct: 253 CCLPCIIAVLYALADRG----GASDEEIERLPKFKFLTVRNSEKVNGEIRETHGGIMTQL 308
Query: 252 GNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
G +P ++++ ECCICL Y++ E+R++ C H FH C+D+WLRI + CPLCK
Sbjct: 309 GVDSPTERVLSSDEAECCICLCDYEDGTELREMSCRHHFHEACIDKWLRINATCPLCK 366
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 151/306 (49%), Gaps = 45/306 (14%)
Query: 44 PSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R TA R + W + L+LL L I + L S E+P P+RIW
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIW 113
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-------RSSEDSRFSHLMNKC 147
I GY + C+L ++ + YR Q G S+ E++ + ED+ S +
Sbjct: 114 IAGYAVQCVLHIVCVAIEYR-FRHRQRGGPSMAADEERGTDGSSSSTDEDAGVSIPHGRL 172
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFL 203
+ +F IW+++G WV + AP L+ LCI LA++ F ++ +
Sbjct: 173 ESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGI 232
Query: 204 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN--------------- 248
+CCC+P I ++L Y ++ +GAS+D I ++P ++++ +D
Sbjct: 233 AVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSGGIM 288
Query: 249 LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
+E G + P A ED ECCICL+ Y + ++R+LPC H FH C+D+WL I + CPLC
Sbjct: 289 IECGTNQPIEKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLC 348
Query: 304 KQELER 309
K + +
Sbjct: 349 KLNVRK 354
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 55/316 (17%)
Query: 44 PSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R TA R + W + L+LL L I + L +S ESP P+R+W
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVW 113
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSS-------EDS--RFSH--- 142
I GY + C+L ++ + YR + Q G S+ E++ S ED+ +H
Sbjct: 114 IAGYAVQCVLHMVCVAIEYRVRHG-QRGGPSMAADEERGSDGSSSSTDEDAGENVTHGRI 172
Query: 143 -----LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
+ + +F IW+++G WV + AP L+ LCI LA++ F
Sbjct: 173 GDCVSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVF 232
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R++
Sbjct: 233 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRINEPEKQSV 288
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+E G + P A ED ECCICL+ Y + E+R+LPC+H FH C+D+W
Sbjct: 289 SMTGSSGGMMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKW 348
Query: 294 LRILSCCPLCKQELER 309
L I + CPLCK + +
Sbjct: 349 LHINATCPLCKLNVRK 364
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 34/270 (12%)
Query: 65 LLALLVQISIITFTLSIS---KKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQV 121
+L +L ++ + T+ +S +E P P+R WIVGY++ CL+ + + YR+ +++
Sbjct: 33 VLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVIAEYRRRESNRD 92
Query: 122 DGFSLPDVEQQR---SSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
L V+ +E + + ++ +F +W+V+G WV Q +P
Sbjct: 93 LDSGLSSVQGSSDGYGAEIESGNSVAKPIESTNAIFSFVWWVIGFYWVTADAEELAQSSP 152
Query: 179 NLHVLCISLLAWN----ALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
L+ LC++ LA++ L + L+ + +CCC+P I +VL Y + A +GASD++I
Sbjct: 153 QLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCIIAVL-YAL---ADREGASDEEI 208
Query: 235 SRLPSWRY------KRVDSNL---------EAGNSAP-----ANEDPECCICLAKYKEKE 274
+LP +++ ++V+ + + G +P ++++ ECCICL Y++
Sbjct: 209 EKLPKFKFLTVRNSEKVNGEIRETRGGIMTQLGVDSPSERVLSSDEAECCICLCDYEDGT 268
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+L C H FH C+D+WLRI + CPLCK
Sbjct: 269 ELRELSCRHHFHEACIDKWLRINATCPLCK 298
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 162/353 (45%), Gaps = 71/353 (20%)
Query: 18 TVPYSSSPPATEDRMARNRPAARAGA--------------PSFLIR-TAMRI--SRASTW 60
T P SS E + R + R A PS L+R TA R S W
Sbjct: 22 TTPLLSSGSQGESNSSSRRQSLREAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDW 81
Query: 61 ------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYR 114
+ L++L +++ L +S+KE P P+R+WIVGY + C+L ++ + YR
Sbjct: 82 AYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGYGLQCVLHMVCVCVEYR 141
Query: 115 QL--------YASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS-----LE----LFFAI 157
+ + DG +L + S E + L + TS LE +F I
Sbjct: 142 RRRRRRRRVGFGIGSDG-NLSSGSRGDSGEYVTLAQLEDHDGTSSVAKHLESANTMFSFI 200
Query: 158 WFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLIS 213
W+++G WV +P L+ LCI L ++ + ++ + +CCC+P I
Sbjct: 201 WWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCII 260
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-----------------LEAGNSAP 256
++L Y + A +GAS + I +L ++++RVD++ E G +P
Sbjct: 261 AIL-YAV---ADQEGASKEDIEQLSKFKFRRVDNDEKLTGNGDEQGPLGGVMTECGTDSP 316
Query: 257 -----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ ED ECCICL+ Y + E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 317 VEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 369
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 161/343 (46%), Gaps = 65/343 (18%)
Query: 20 PYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRIS---RASTW------MTLELL--AL 68
P +P A M R R G PS L+R + R + W + L+++
Sbjct: 618 PRQEAPRAASLAMLLGRVTGRRG-PSMLVRETAALELEERRADWGYSKPVVALDMVWNTA 676
Query: 69 LVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA---------- 118
V +SI LS+ KE P P+RIWI GY + CL+ ++L++ YR+ +
Sbjct: 677 FVVVSITMLILSV--KEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSRRVRDEERQQ 734
Query: 119 -----SQVDGFSLPDVEQQRSSED----------SRFSHLMNKCRTSLELFFAIWFVMGN 163
++V+G + + SED S S ++ +C + + +W+++G
Sbjct: 735 QQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSNRSSVIKRCESVNTMASFLWWIVGF 794
Query: 164 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYN 219
WV Q AP+L+ L + LA++ F +L L LCCC+P I ++L Y
Sbjct: 795 YWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YA 853
Query: 220 MNMGAADKGASDDQISRLPSWRYK----RVDSNLEAGNSAP--------ANE------DP 261
+ A +GAS+ +S LP +R++ ++ AG P ANE D
Sbjct: 854 V---AGQEGASEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLANERILLPEDA 910
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
ECCICL Y++ E+ LPC+H FH C+ +WL++ + CPLCK
Sbjct: 911 ECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPLCK 953
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 164/322 (50%), Gaps = 47/322 (14%)
Query: 26 PATEDRMARNRPAARAGAPSFLIR-TAMRI---------SRASTWMTLE---LLALLVQI 72
P+ R A +R RA + ++R +++R+ R S W + +L +L +
Sbjct: 31 PSQPLRGAASRLLRRASSRGMMLRESSVRVRETAAEQIEERQSEWAYSKPVIVLDVLWNL 90
Query: 73 SIITFTLSIS---KKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDV 129
+ + T+ +S +E P P+R WIVGY++ CL+ + + YR+ +++ L V
Sbjct: 91 AFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVIAEYRRRESNRDLDSGLSSV 150
Query: 130 EQQR---SSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCIS 186
+ +E + + ++ +F +W+V+G WV Q +P L+ LC++
Sbjct: 151 QGSSDGYGAEIESGNSVAKHIESTNAIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVA 210
Query: 187 LLAWNA----LSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY 242
LA++ L + L+ + +CCC+P I +VL Y + A +GASD++I +LP +++
Sbjct: 211 FLAFDVIFVVLCVAVACLIGIAVCCCLPCIIAVL-YAL---ADREGASDEEIEKLPKFKF 266
Query: 243 ------KRVDSNL---------EAGNSAPA-----NEDPECCICLAKYKEKEEVRKLPCS 282
++V+ + + G P+ +++ ECCICL Y++ E+R+L C
Sbjct: 267 LTVRNSEKVNGEIRETRGGIMTQLGVDFPSERVLSSDEAECCICLCDYEDGTELRELFCR 326
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H FH C+D+WLRI + CPLCK
Sbjct: 327 HHFHEACIDKWLRINATCPLCK 348
>gi|147815561|emb|CAN70532.1| hypothetical protein VITISV_010220 [Vitis vinifera]
Length = 232
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 24/225 (10%)
Query: 94 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLEL 153
W++GY GC L L LLY RY + S E + ++ + +L
Sbjct: 13 WVMGYASGCALMLPLLYSRYXIARTLNLG----------SSEEAEKLFGVVRFFKMTLSC 62
Query: 154 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LI 212
FF +W V+G VW+ + F A L LC+ L Y+ P + F LC +P LI
Sbjct: 63 FFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFASLCLFLPCLI 122
Query: 213 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN---------EDPEC 263
+ L ++ +GA+ + I+ LP++++K ++ G A ED C
Sbjct: 123 CATL---VSPHEKPRGATPESINELPTYKFKSKENGRGEGGVWAAGTIKERTLSEEDAVC 179
Query: 264 CICLAKYKEKEEVRKLPC-SHMFHLKCVDQWLRILSCCPLCKQEL 307
CICL +Y + EE+R+LPC SH FH +CVDQWL+I +CCPLC+ EL
Sbjct: 180 CICLGQYADNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSEL 224
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 59/329 (17%)
Query: 31 RMARNRPAARA--GAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTL 79
R+ R+ + R PS L+R A R S W + L+ + L +++ T L
Sbjct: 34 RLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVAVATAVL 93
Query: 80 SISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA---------------SQVDGF 124
+S E+P P+R+W++GY + C++ ++ + YR+ + + DG
Sbjct: 94 VLSSDENPNMPLRVWVIGYGLQCMMHMVCVCVEYRRRNSRRRRDMSPRSSSSSMEEEDGL 153
Query: 125 SLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSFQRAPNL 180
L R E + + N LE + IW+V+G WV Q +P L
Sbjct: 154 GLSRNSDDRYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQL 213
Query: 181 HVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 236
+ LCI L ++ + ++ + +CCC+P I +VL Y + A +GAS + I +
Sbjct: 214 YWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGASKEDIDQ 269
Query: 237 LPSWRYKRVDSNL----------------EAGNSAPA-----NEDPECCICLAKYKEKEE 275
L +++++V ++ E G +P +ED ECCICL+ Y+++ E
Sbjct: 270 LTKFKFRKVGDSVKHTVDEEQGDSGGLMTECGTDSPVEHTLPHEDAECCICLSAYEDETE 329
Query: 276 VRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 330 LRELPCGHHFHCGCVDKWLYINATCPLCK 358
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 54/299 (18%)
Query: 56 RASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL 109
R S W + L+L+ L +++ L IS+ E P P+RIW++GY + C+L + +
Sbjct: 19 RQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCVLHMSCV 78
Query: 110 YGRYRQLYA--SQVDGFSLPDVEQQR----SSEDSR----------FSHLMNKCRTSLEL 153
YR+ S G L D+E S+E+ F L + ++ +
Sbjct: 79 VSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEKHRLLTGSSFFPFCSLAKRLESANTM 138
Query: 154 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCV 209
F +W+V+G W+ Q +P ++ LCI LA++ F ++ + +CCC+
Sbjct: 139 FSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALACMIGIAVCCCL 198
Query: 210 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--------NLEAGNSAPAN--- 258
P I ++L ++ +GAS++ IS LP+ ++KRV S + E + PA
Sbjct: 199 PCIIAILYAVVD----QEGASEEDISVLPTLKFKRVKSPSCSSTKPDEEDKAALPAGGVM 254
Query: 259 -------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
ED ECCICL+ Y++ E+R+LPC+H FH C+ +WLRI + CPLCK
Sbjct: 255 CSSESLFQRMLSAEDAECCICLSSYEDDAELRELPCNHHFHGSCIVKWLRINATCPLCK 313
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 64/328 (19%)
Query: 27 ATEDRMARNRPAARAGAPSFLIRTAMRISRASTW------MTLELLALLVQISIITFTLS 80
A+ RM P+ R + R S W + L++L V + + L
Sbjct: 49 ASNRRMMLREPSVRVRE----VAAEQLEERQSQWAYSKPIIVLDILWNFVFVIVSIAILG 104
Query: 81 ISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS--------------------Q 120
S +E P P+R+WI+GY+ CLL + + Y++ + +
Sbjct: 105 FSSEEDPDVPLRLWIIGYNFQCLLHVGCVIAEYKRRREANSPPSGEDSSNHESLSGSDDE 164
Query: 121 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 180
DG+S+ D ++D + ++ +F +W+++G WV Q +P L
Sbjct: 165 SDGYSIND------TDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQL 218
Query: 181 HVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 236
+ LC++ LA++ + + L+ + +CCC+P I ++L Y + A +GA D++I R
Sbjct: 219 YWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAIL-YAL---ADQEGAPDEEIER 274
Query: 237 LPSWRY-------------KRVDSNLEAGNSAPA-------NEDPECCICLAKYKEKEEV 276
L +++ + + G A + +ED EC ICL Y++ E+
Sbjct: 275 LLKFKFLVVKNSEKVNGEIRETQGGIMTGLGAESQTERVLSSEDAECSICLCAYEDGVEL 334
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCK 304
R+LPC H FH CVD+WLRI + CPLCK
Sbjct: 335 RELPCRHHFHSLCVDKWLRINATCPLCK 362
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 55/301 (18%)
Query: 55 SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLL 108
R S W + L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++
Sbjct: 71 ERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVC 130
Query: 109 L---YGRYRQLYASQV------------------DGFSLPDVEQQRSSEDSRFSHLMNKC 147
+ Y R R+L +S D D + + D + +
Sbjct: 131 VCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDETSVAKHL 190
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFL 203
++ +F IW+++G WV + +P L+ LCI LA++ + ++ +
Sbjct: 191 ESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGI 250
Query: 204 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN--------------- 248
+CCC+P I ++L Y + A +GA+ ++I RLP ++++R+ +
Sbjct: 251 AVCCCLPCIIAIL-YTV---ADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIM 306
Query: 249 LEAGNSAPA-----NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
E P ED ECCICL+ Y+++ E+R+LPC H FH C+D+WL I + CPLC
Sbjct: 307 TECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLC 366
Query: 304 K 304
K
Sbjct: 367 K 367
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 47/292 (16%)
Query: 55 SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLL 108
R S W + +++L L + I L +S +E P P+R+WIVGY + CL ++
Sbjct: 19 ERQSGWGYSKPIVLIDVLRNLAFVIIAVGVLGLSLEEKPKVPLRVWIVGYGLQCLCHVVC 78
Query: 109 LYGRYRQ-----------LYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAI 157
+ YR+ L + D ED+ S + + ++ + I
Sbjct: 79 VVVEYRKRRNLGFEESGILSSGSGDSLGFGTHRSGNDGEDT--SRVPKRVESASTMVSVI 136
Query: 158 WFVMGNVWVFDS-RFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLI 212
W+V+G WV + R + +P L+ LC++ LA++AL + L+ + +CCC+P I
Sbjct: 137 WWVIGFYWVTAAGRQDLEENSPQLYWLCVTFLAFDALFVIICAAAACLIGIAVCCCLPCI 196
Query: 213 SSVLGYNMNMGAADKGASDDQISRLPSWRY------KRVDSN---------LEAGNSAP- 256
+L M +GA+ ++I RLP +++ ++VD E N P
Sbjct: 197 IGIL---YAMTDPQEGATAEEIDRLPKYKFCRAEAFEKVDGENPEICGGMMTECDNDTPI 253
Query: 257 ----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
++ED ECCICL+ Y+ E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 254 ERAVSHEDAECCICLSAYENGSELRELPCNHHFHCMCIDKWLCINATCPLCK 305
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 146/298 (48%), Gaps = 53/298 (17%)
Query: 56 RASTWMTLELLALL-----VQISIITFT-LSISKKESPIWPMRIWIVGYDIGCLLSLLLL 109
R S W + + LL + II+FT L +S E P P+R WI+GY + C++ + +
Sbjct: 78 RQSDWAYSKPIILLDLLWNLAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQCIIHMSCV 137
Query: 110 YGRYRQLYASQ-------------------VDGFSLPDVEQQRSSEDSRFSHLMNKCRTS 150
Y++ +++ V G D +++ + S+L+ ++
Sbjct: 138 AVEYKRRRSTREPTGLDRNSDWTSGEDSNSVSGSDGDDYATEQTVNEDESSNLVKHIESA 197
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNA----LSYSFPFLLFLLLC 206
+F IW+++G WV + +P L+ L I+ LA++ + + L+ + +C
Sbjct: 198 NTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVVFVLICVAIACLVGVAIC 257
Query: 207 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR------VDSNLEAGNS------ 254
CC+P I ++L Y + +GA+ ++I RLP + + R V+ +++ +
Sbjct: 258 CCLPCIIAIL-YAV---TDQEGATKEEIERLPKYTFNRTGDVEKVNGDIQESSGGIMSNC 313
Query: 255 ---APAN-----EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
AP ED ECCICL+ Y+ E+R+LPC+H FH C+D+WL + + CPLCK
Sbjct: 314 DTDAPTERFLRPEDSECCICLSAYENGAELRELPCNHHFHCNCIDKWLHMNATCPLCK 371
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 150/316 (47%), Gaps = 55/316 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+ L L I + L +S ESP P+R W
Sbjct: 55 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 114
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQ--------------QRSSEDSRF 140
I GY C++ ++ + Y Y Q+ G +P E+ + SR
Sbjct: 115 IAGYTAQCVVHMVCVAIEYCLRYG-QLGGSPIPVDEESGSGSASSSSSDDDREHGSHSRS 173
Query: 141 SHLMNKCR---TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY-- 195
++ + ++ +F +W+++G WV + AP L+ LCI LA++
Sbjct: 174 GDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIIFLAFDVFFVVF 233
Query: 196 --SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
+ ++ + +CCC+P I ++L Y ++ +GAS+D I ++P +++++++
Sbjct: 234 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRKMEEPEKQSV 289
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+W
Sbjct: 290 GVPGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKW 349
Query: 294 LRILSCCPLCKQELER 309
L I + CPLCK + +
Sbjct: 350 LHINATCPLCKYNVRK 365
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 147/299 (49%), Gaps = 54/299 (18%)
Query: 56 RASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL 109
R S W + L+L+ L +++ L IS+ E P P+RIW++GY + C+L + +
Sbjct: 19 RQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCVLHMSCV 78
Query: 110 YGRYRQLYA--SQVDGFSLPDVEQQR----SSEDSR----------FSHLMNKCRTSLEL 153
YR+ S G L D+E S+E+ F L + ++ +
Sbjct: 79 VSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEKHSLLTGSSFFPFCSLAKRLESANTM 138
Query: 154 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCV 209
F +W+V+G W+ Q +P ++ LCI LA++ F ++ + +CCC+
Sbjct: 139 FSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALACMIGIAVCCCL 198
Query: 210 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--------NLEAGNSAPAN--- 258
P I ++L ++ +GAS++ IS LP+ ++KRV + + E + PA
Sbjct: 199 PCIIAILYAVVD----QEGASEEDISVLPTLKFKRVRNPSCSSTKPDEEDKAALPAGGVM 254
Query: 259 -------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
ED ECCICL+ Y++ E+R+LPC+H FH C+ +WLRI + CPLCK
Sbjct: 255 CSSESLFQRMLSAEDAECCICLSSYEDDAELRELPCNHHFHGSCIVKWLRINATCPLCK 313
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 38/272 (13%)
Query: 61 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 120
+ L+L L + + L +S +E P P+R W+ GY + CL + ++ Y + +
Sbjct: 76 LVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRY 135
Query: 121 VDGFSLPDVEQQRSSEDSRFSH----LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQR 176
GF E + + ++ R SH +M + + IW+V G W+ +
Sbjct: 136 RLGF-----ENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLEG 190
Query: 177 APNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 232
+P L+ L + LA++ F F+ F +CC +P ++ GY MN +GAS+D
Sbjct: 191 SPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLA--YGYTMNF---LEGASED 245
Query: 233 QISRLPSWRY--------------KRVDSNLEAGNSAPANE------DPECCICLAKYKE 272
+I LP +R+ + V LE G + E D CCICLA+Y
Sbjct: 246 EIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVH 305
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
++ LPC+H FH +C+ +WLRI + CPLCK
Sbjct: 306 GVQLCMLPCNHHFHTRCIVKWLRINATCPLCK 337
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 55/301 (18%)
Query: 55 SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLL 108
R S W + L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++
Sbjct: 18 ERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVC 77
Query: 109 L---YGRYRQLYASQV------------------DGFSLPDVEQQRSSEDSRFSHLMNKC 147
+ Y R R+L +S D D + + D + +
Sbjct: 78 VCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDETSVAKHL 137
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFL 203
++ +F IW+++G WV + +P L+ LCI LA++ + ++ +
Sbjct: 138 ESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGI 197
Query: 204 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN--------------- 248
+CCC+P I ++L Y + A +GA+ ++I RLP ++++R+ +
Sbjct: 198 AVCCCLPCIIAIL-YTV---ADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIM 253
Query: 249 LEAGNSAPA-----NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
E P ED ECCICL+ Y+++ E+R+LPC H FH C+D+WL I + CPLC
Sbjct: 254 TECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLC 313
Query: 304 K 304
K
Sbjct: 314 K 314
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 153/316 (48%), Gaps = 55/316 (17%)
Query: 44 PSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R TA R + W + L+LL L I + L S E+P P+RIW
Sbjct: 54 PSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIW 113
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-------RSSEDSRFS----HL 143
I GY + C+L ++ + YR Q G S+ E++ + ED+ S +
Sbjct: 114 IAGYAVQCVLHIVCVAIEYR-FRHRQRGGPSMAADEERGTDGSSSSTDEDAGVSIPHGRI 172
Query: 144 MNKCRTSLEL------FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
N R + L F IW+++G WV + AP L+ LCI LA++ F
Sbjct: 173 GNYVRIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVF 232
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++ +D
Sbjct: 233 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRTMDETEKNSV 288
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+E G + P A ED ECCICL+ Y + ++R+LPC H FH C+D+W
Sbjct: 289 SLTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKW 348
Query: 294 LRILSCCPLCKQELER 309
L I + CPLCK + +
Sbjct: 349 LHINATCPLCKLNVRK 364
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 148/312 (47%), Gaps = 47/312 (15%)
Query: 39 ARAG--APSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESP 87
RAG PS L+R TA R R + W + L++ + + + L+ + E P
Sbjct: 38 GRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERP 97
Query: 88 IWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVD-GFSLPDVEQQRSSEDSRFSH---- 142
P+R+WIVGY + CL+ +LL++ YR+ G DVE S D +S
Sbjct: 98 NTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSHHGQRARDVESDAGSGDEDYSDDRDW 157
Query: 143 -----LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
+C +W+++G WV Q AP L+ L + LA++ F
Sbjct: 158 SSGYSFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIF 217
Query: 198 PFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE--- 250
+L L LCCC+P I ++L Y + A +GAS+ +S LP +R++ + +
Sbjct: 218 CVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSMLPKYRFRILSDEDKPSG 273
Query: 251 -AGNSAP--------ANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR 295
AG+ P ANE D ECCICL Y++ E+ LPC+H FH C+ +WL+
Sbjct: 274 GAGSMVPIETSSAYLANERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLK 333
Query: 296 ILSCCPLCKQEL 307
+ + CPLCK +
Sbjct: 334 MNATCPLCKYNI 345
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 143/284 (50%), Gaps = 38/284 (13%)
Query: 55 SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLL 108
R S W + L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++
Sbjct: 71 ERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVC 130
Query: 109 L---YGRYRQLYAS-QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNV 164
+ Y R R+L +S ++ SS + + ++ +F IW+++G
Sbjct: 131 VCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGNFSCSVAKHLESANTMFSFIWWIIGFY 190
Query: 165 WVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNM 220
WV + +P L+ LCI LA++ + ++ + +CCC+P I ++L Y +
Sbjct: 191 WVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAIL-YTV 249
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAPA-----NED 260
A +GA+ ++I RLP ++++R+ + E P ED
Sbjct: 250 ---ADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQED 306
Query: 261 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
ECCICL+ Y+++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 307 AECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCK 350
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 151/316 (47%), Gaps = 55/316 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+ L L I + L +S ESP P+R W
Sbjct: 55 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 114
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQ--------------QRSSEDSRF 140
I GY C++ ++ + YR Y Q+ G +P E+ + SR
Sbjct: 115 IAGYTAQCVVHMVCVAIEYRLRYG-QLGGSPIPVDEESGSGSASSSSSDDDREHGSHSRS 173
Query: 141 SHLMNKCR---TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
++ + ++ +F +W+++G WV + AP L+ LCI LA++ F
Sbjct: 174 GDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVF 233
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P +++++++
Sbjct: 234 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRKMEEPEKQSV 289
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+W
Sbjct: 290 GVPGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKW 349
Query: 294 LRILSCCPLCKQELER 309
L I + CPLCK + +
Sbjct: 350 LHINATCPLCKYNVRK 365
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 40/302 (13%)
Query: 39 ARAGAPSFLIRTAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKESPIWP 90
R G + + TA R R + W + L++ + + + L+ + KE+P P
Sbjct: 33 GRRGHSAVVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTP 92
Query: 91 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVD---GFSLPDVEQQRSSEDSRFSHLMNKC 147
+R WI GY + CL+ + L++ YR+ + D SL + S ED+RF+ +C
Sbjct: 93 IRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDARFT---KRC 149
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL--- 204
+ + +W+++G WV Q AP L+ L + LA++ F +L L
Sbjct: 150 ASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGI 209
Query: 205 -LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN------------LEA 251
LCCC+P I ++L Y + A +GAS+ +S LP +R++ + + +E
Sbjct: 210 ALCCCLPCIIAIL-YAV---AGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMET 265
Query: 252 GNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
N NE D ECCIC++ Y++ E+ LPC+H FH C+ +WL++ + CPLCK
Sbjct: 266 SNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKY 325
Query: 306 EL 307
+
Sbjct: 326 NI 327
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 151/330 (45%), Gaps = 73/330 (22%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL L I + L++S++ESP P+R+W
Sbjct: 59 PSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAFILVAAAVLALSREESPSMPLRLW 118
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVE-------------------QQRSS 135
IVGY + C+L + + YR + D E + R+
Sbjct: 119 IVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEETGTDGSSSSSDEDAGERAPRGRNG 178
Query: 136 EDSR-----------FSHLMNKCRTSLEL------FFAIWFVMGNVWVFDSRFGSFQRAP 178
+ R FS + C + L F IW+++G WV AP
Sbjct: 179 DYVRSVGHHIFYPDNFSVHKSACSIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAP 238
Query: 179 NLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
L+ LCI LA++ F ++ + +CCC+P I ++L Y ++ +GAS+D I
Sbjct: 239 QLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDI 294
Query: 235 SRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPECCICLAKYKEKE 274
++P ++++R+D +E G + P A ED ECCICL+ Y +
Sbjct: 295 RQIPRYKFRRMDEPEKQSVNMTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGA 354
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 355 ELRELPCGHHFHCVCIDKWLHINATCPLCK 384
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 53/310 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL L I++ L +S+ E P+R W
Sbjct: 4 PSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRGEDSPMPLRTW 63
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRS----------SEDSRFSH-- 142
+ GY + C++ ++ + YR + + D E+ +ED R
Sbjct: 64 VAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCT 123
Query: 143 ----LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 198
+ ++ +F IW+++G W+ + AP L+ LCI LA++ F
Sbjct: 124 DCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFC 183
Query: 199 F----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN------ 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R D
Sbjct: 184 VALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQTAD 239
Query: 249 ---------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL 294
E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL
Sbjct: 240 ETGPFGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWL 299
Query: 295 RILSCCPLCK 304
I + CPLCK
Sbjct: 300 HINATCPLCK 309
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 151/316 (47%), Gaps = 55/316 (17%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+ L L I + L +S ESP P+R W
Sbjct: 4 PSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPLRFW 63
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQ--------------QRSSEDSRF 140
I GY C++ ++ + YR Y Q+ G +P E+ + SR
Sbjct: 64 IAGYTAQCVVHMVCVAIEYRLRYG-QLGGSPIPVDEESGSGSASSSSSDDDREHGSHSRS 122
Query: 141 SHLMNKCR---TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
++ + ++ +F +W+++G WV + AP L+ LCI LA++ F
Sbjct: 123 GDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVF 182
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P +++++++
Sbjct: 183 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRKMEEPEKQSV 238
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+W
Sbjct: 239 GVPGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKW 298
Query: 294 LRILSCCPLCKQELER 309
L I + CPLCK + +
Sbjct: 299 LHINATCPLCKYNVRK 314
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 158/338 (46%), Gaps = 53/338 (15%)
Query: 16 STTVPYSSSPPATEDRMARNRPAAR----AGA------PSFLIR-TAMRI--SRASTW-- 60
+ +V S+P R R AAR AG+ PS L+R TA R S W
Sbjct: 46 TISVDEESNPIHRSARRQGLREAARFLRHAGSRRMMREPSMLVRETAAEQLEERQSDWAY 105
Query: 61 ----MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 116
+ L++L L ++I L +S+ E P P+R+W+VGY I C L + + YR+
Sbjct: 106 SKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRR 165
Query: 117 ----YASQVDGFSLPDVEQQRS------SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWV 166
+ G L + Q+ + S+ ++ +F IW+++G WV
Sbjct: 166 RRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWV 225
Query: 167 FDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNM 222
+P L+ LCI L ++ + ++ L +CCC+P I ++L Y +
Sbjct: 226 SAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV-- 282
Query: 223 GAADKGASDDQISRLPSWRYKRVDS-----------NLEAGNSAPAN-----EDPECCIC 266
A +GAS + I ++P +R+ + + E G +P ED ECCIC
Sbjct: 283 -ADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCIC 341
Query: 267 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
L +Y++ E+R+LPC+H FH C+D+WL I S CPLCK
Sbjct: 342 LCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 37/303 (12%)
Query: 35 NRPAARAGAPSFLIRTAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKES 86
NR + R GA + TA + R + W + L++L + + L + K+E
Sbjct: 35 NRASGRRGASMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEK 94
Query: 87 PIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDG--FSLPDVEQQRSSEDSRFSHLM 144
P P+RIWI GY I CL+ ++L++ +R+ A G + Q ED+ L
Sbjct: 95 PNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSRPGDLEAAQATNQDSEDEDNDERFLS 154
Query: 145 NK-CRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 203
K C + + +W+++G W+ Q A +L+ L LA++ F +L
Sbjct: 155 TKTCESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLAC 214
Query: 204 L----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE----AGNSA 255
L LCCC+P I ++L Y + A +GAS+ +S LP +R+ ++++ + G
Sbjct: 215 LIGIALCCCLPCIIALL-YAV---AGQEGASEADLSILPKYRFHTMNNDEKQSDGGGKMI 270
Query: 256 PAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 301
P + ED +CCICL+ Y++ E+ LPC+H FH C+ +WL++ + CP
Sbjct: 271 PVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCP 330
Query: 302 LCK 304
LCK
Sbjct: 331 LCK 333
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 45/325 (13%)
Query: 22 SSSPPATEDRMARNRPAARAGAPSFLIRTAMRI--SRASTW------MTLELLALLVQIS 73
+S+ P + R R G + TA R R W + L++ L +
Sbjct: 31 ASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVF 90
Query: 74 IITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQV-----------D 122
+ L S E P P+R+WIV Y CL+ ++L++ +++ A + D
Sbjct: 91 VSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQEPD 150
Query: 123 GFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHV 182
G+ + ++ + S FS + +C + + IW++ G WV Q AP+L+
Sbjct: 151 GYVTNESDEDDGGQRS-FSSVAKRCESVNTMVSLIWWLFGFYWVVAGGNILMQNAPSLYW 209
Query: 183 LCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 238
L + LA++ F +L L LCCC+P I ++L Y + A +GA+D +S LP
Sbjct: 210 LAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGATDADLSMLP 265
Query: 239 SWRYKRVDSNLEAGNS--APAN--------------EDPECCICLAKYKEKEEVRKLPCS 282
+RY RV + G+ P ED ECCICL+ Y++ E+ LPC+
Sbjct: 266 KYRY-RVSNEPSPGDGLMVPVETSSRYLTTERVLLCEDAECCICLSPYEDGVELHALPCN 324
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H FH C+ +WL++ + CPLCK +
Sbjct: 325 HHFHYACITKWLKMNATCPLCKYNI 349
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 37/303 (12%)
Query: 35 NRPAARAGAPSFLIRTAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKES 86
NR + R GA + TA + R + W + L++L + + L + K+E
Sbjct: 35 NRASGRRGASMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEK 94
Query: 87 PIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDG--FSLPDVEQQRSSEDSRFSHLM 144
P P+RIWI GY I CL+ ++L++ +R+ A G + Q ED+ L
Sbjct: 95 PNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSRPGDLEAAQATNQDSEDEDNDERFLS 154
Query: 145 NK-CRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 203
K C + + +W+++G W+ Q A +L+ L LA++ F +L
Sbjct: 155 TKTCESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLAC 214
Query: 204 L----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE----AGNSA 255
L LCCC+P I ++L Y + A +GAS+ +S LP +R+ ++++ + G
Sbjct: 215 LIGIALCCCLPCIIALL-YAV---AGQEGASEADLSILPKYRFHTMNNDEKQSDGGGKMI 270
Query: 256 PAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 301
P + ED +CCICL+ Y++ E+ LPC+H FH C+ +WL++ + CP
Sbjct: 271 PVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCP 330
Query: 302 LCK 304
LCK
Sbjct: 331 LCK 333
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 58/285 (20%)
Query: 65 LLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS----- 119
L ++V I+I+ F S E P P+R+WI+GY++ CL + + Y++ +
Sbjct: 93 FLFVIVSIAILGF----SSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPPP 148
Query: 120 ----------------QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGN 163
+ DG+S+ + +D + ++ +F +W+++G
Sbjct: 149 SGEDSSNHESLSGSEDESDGYSI-----NNTDDDDHGTSFTKHLESANTMFSFVWWIIGF 203
Query: 164 VWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYN 219
WV Q +P L+ LC++ LA++ + + L+ + +CCC+P I ++L Y
Sbjct: 204 YWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAIL-YA 262
Query: 220 MNMGAADKGASDDQISRLPSWRY------KRVDSNLEAGNSAPA--------------NE 259
+ A +GA D++I RL +++ ++V+ + +E
Sbjct: 263 L---ADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLSE 319
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
D EC ICL Y++ E+R+LPC H FH CVD+WLRI + CPLCK
Sbjct: 320 DAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 364
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 46/273 (16%)
Query: 61 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 120
+ L+++ L +S+ L + +E P P+R+WI GY + CLL + + ++R+
Sbjct: 76 VVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRR----- 130
Query: 121 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 180
R+ + R S ++ + + +F ++W+V G W+ Q +P L
Sbjct: 131 ------------RNGNEDRHSSIVKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRL 178
Query: 181 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 236
+ L + LA++ F + F L CC+PL + + Y M + +GAS+D I
Sbjct: 179 YWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIPL--AAIAYAMKIR---EGASEDDIRL 233
Query: 237 LPSWRY------KRVDSN--------LEAGNSAPAN------EDPECCICLAKYKEKEEV 276
LP +R+ ++VD + +E G+S+ + ED ECCICL++Y + E+
Sbjct: 234 LPRYRFCDASLVRKVDDDKKQALEAAVELGSSSSISDLALHPEDSECCICLSRYVDGAEL 293
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
LPC+H FH C+ +WLRI + CPLCK + R
Sbjct: 294 YILPCNHHFHCGCISRWLRINATCPLCKFNILR 326
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 149/325 (45%), Gaps = 45/325 (13%)
Query: 22 SSSPPATEDRMARNRPAARAGAPSFLIRTAMRI--SRASTW------MTLELLALLVQIS 73
+S+ P + R R G + TA R R W + L++ L +
Sbjct: 31 ASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVF 90
Query: 74 IITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-----------SQVD 122
+ L S E P P+R+WIV Y CL+ ++L++ +++ A Q D
Sbjct: 91 VSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQQPD 150
Query: 123 GFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHV 182
G+ + ++ + S S + +C + L IW++ G WV Q AP+L+
Sbjct: 151 GYVTNESDEDDGGQRS-LSSVAKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYW 209
Query: 183 LCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 238
L + LA++ F +L L LCCC+P I ++L Y + A +GA+D +S LP
Sbjct: 210 LAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGATDADLSMLP 265
Query: 239 SWRYKRVDSNLEAGNS--APAN--------------EDPECCICLAKYKEKEEVRKLPCS 282
+RY RV + G+ P ED ECCICL+ Y++ E+ LPC+
Sbjct: 266 KYRY-RVSNEPSPGDGLMVPVETSSRYLTTERVLLREDAECCICLSPYEDGVELHALPCN 324
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H FH C+ +WL++ + CPLCK +
Sbjct: 325 HHFHYACITKWLKMNATCPLCKYNI 349
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 62/317 (19%)
Query: 44 PSFLIR--TAMRIS-RASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS ++R A ++ R S W + L+LL L + + L+ + +E P PMR+W
Sbjct: 49 PSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPMRVW 108
Query: 95 IVGYDIGCLLSLLLLYGRY----RQLYAS---------------QVD---GFSLPDVEQQ 132
I GY + CLL ++ + Y RQ S QV+ G + + E
Sbjct: 109 IAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETG 168
Query: 133 RSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNA 192
R + R S + + + +F W+++G W+ + AP L+ LCI LA++
Sbjct: 169 RQETEER-SSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDV 227
Query: 193 LSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN 248
+F ++ + +CCC+P I ++L N GAS+ +I+ LP +R+ R+ +
Sbjct: 228 FFVAFCAAVACMIGIAVCCCLPCIIAILYAVAN----QDGASETEINLLPKYRFCRIGPS 283
Query: 249 LEAGNSAP---------------------ANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
E NS ED ECCICL+ Y++ E+ +LPC+H FH
Sbjct: 284 -EKNNSEKSPSYGGVMTLICGESTSERVLGAEDAECCICLSAYEDGVELYELPCNHHFHC 342
Query: 288 KCVDQWLRILSCCPLCK 304
C+ +WLRI + CPLCK
Sbjct: 343 GCIAKWLRINATCPLCK 359
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 155/325 (47%), Gaps = 57/325 (17%)
Query: 31 RMARNRPAARAGAPSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSI 81
R A NR R PS L+R TA R S W + L+++ + + L +
Sbjct: 51 RQASNRRTMRE--PSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVL 108
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLL---YGRYRQL----YASQVDGFSLPDVEQQRS 134
S+ ESP P+R+WIVGY C+L ++ + Y R RQL ++S +G S + S
Sbjct: 109 SRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSISGLGS 168
Query: 135 SEDSRF-----------SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVL 183
+S S + ++ +F IW+++G WV Q +P L+ L
Sbjct: 169 RANSSHYVSLAQLDENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWL 228
Query: 184 CISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 239
CI L ++ + ++ + +CCC+P I ++L Y + A +GA+ + + +L
Sbjct: 229 CIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALL-YAV---ADQEGATKEDVEQLSK 284
Query: 240 WRYKRVDSNL---------------EAGNSAPA-----NEDPECCICLAKYKEKEEVRKL 279
+++++V++ E +P ED ECCICL+ Y++ E+R+L
Sbjct: 285 FKFRKVENTEKFSTDVQEPLGGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVELREL 344
Query: 280 PCSHMFHLKCVDQWLRILSCCPLCK 304
PC H FH CVD+WL I + CPLCK
Sbjct: 345 PCGHHFHCACVDKWLYINATCPLCK 369
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 58/285 (20%)
Query: 65 LLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS----- 119
L ++V I+I+ F S E P P+R+WI+GY++ CL + + Y++ +
Sbjct: 76 FLFVIVSIAILGF----SSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPPP 131
Query: 120 ----------------QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGN 163
+ DG+S+ + +D + ++ +F +W+++G
Sbjct: 132 SGEDSSNHESLSGSEDESDGYSI-----NNTDDDDHGTSFTKHLESANTMFSFVWWIIGF 186
Query: 164 VWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYN 219
WV Q +P L+ LC++ LA++ + + L+ + +CCC+P I ++L Y
Sbjct: 187 YWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAIL-YA 245
Query: 220 MNMGAADKGASDDQISRLPSWRY------KRVDSNLEAGNSAPA--------------NE 259
+ A +GA D++I RL +++ ++V+ + +E
Sbjct: 246 L---ADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLSE 302
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
D EC ICL Y++ E+R+LPC H FH CVD+WLRI + CPLCK
Sbjct: 303 DAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 347
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 131/254 (51%), Gaps = 35/254 (13%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------LYASQVDGFSLPDVEQQRSS 135
S++ESP P+R WIVGY + C+L ++ + YR+ ++ S+ DG
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 136 EDS-RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALS 194
DS ++ + ++ +F IW+++G WV + +P L+ LCI L ++
Sbjct: 169 GDSSQYVTVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFF 228
Query: 195 Y----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV----- 245
+ ++ + +CCC+P I ++L Y + A +GAS + I +L +++++V
Sbjct: 229 VVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASKEDIDQLSRFKFRKVGDIEK 284
Query: 246 -DSNL---------EAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
D ++ E G AP + ED ECCICL+ Y + E+R+LPC H FH CV
Sbjct: 285 IDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCV 344
Query: 291 DQWLRILSCCPLCK 304
D+WL I + CPLCK
Sbjct: 345 DKWLYINATCPLCK 358
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 62/346 (17%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAAR----AGAPSFLIRTAMR---------------- 53
++S + P SPP + P R GA F+ RT R
Sbjct: 14 SASPSAPLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAE 73
Query: 54 --ISRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLS 105
R + W + L++L L +++ L+ S E P P+R+WIVGY + CLL
Sbjct: 74 HLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVLQCLLH 133
Query: 106 LLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVW 165
+L + YR+ + +Q+ + ++ ++ ++ +F IW+++G W
Sbjct: 134 VLSVTVEYRRRRR---------NADQEGAGDEDLKLSIVKHLESANTMFSFIWWIVGFYW 184
Query: 166 VFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMN 221
V AP L+ L I LA++ F ++ + +CCC+P I ++L Y +
Sbjct: 185 VSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAVT 243
Query: 222 MGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN------------------EDP 261
+ +GAS+D I+ L ++++ + L AG +AP ED
Sbjct: 244 DQVSQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDA 303
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK ++
Sbjct: 304 ECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 349
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 170/360 (47%), Gaps = 81/360 (22%)
Query: 22 SSSPPATEDRM-ARNRPAARAGAPSFLIR-TAMRISRASTWMTLELLAL----------- 68
+ SP A++D + +R A+ GA FL R ++ RI R + + E A
Sbjct: 28 TGSPNASDDGARSLSRRASIQGAARFLRRASSRRIMREPSMLVRETAAEQLEERQSDWAY 87
Query: 69 ---LVQISII---------TFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 116
+V + II T L +S+ E+P P+R+W+VGY + CLL ++ + YR+
Sbjct: 88 SRPVVVLDIIWNLAFVVVATVVLVLSRHENPNMPVRVWVVGYALQCLLHMICVCFEYRRR 147
Query: 117 YA------SQVDGFSLPDV------------EQQRSSE--DSRFSHLMNKCRTSL----- 151
++ S G S EQQ S + D +++ RTS+
Sbjct: 148 HSNAQQQRSNSGGQSGHTNNNNNSANQQSPGEQQESDDATDEEVDEVLSTERTSIAKRLE 207
Query: 152 ---ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLL 204
+F IW+++G W+ AP L+ LC+ LA++ + ++ +
Sbjct: 208 SANTMFSFIWWIVGFYWISAGGQILTHDAPQLYWLCVVFLAFDVFFVVFCVALACVIGIA 267
Query: 205 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS----------------N 248
+CCC+P I ++L Y + A +GAS++ I LP +++K + N
Sbjct: 268 VCCCLPCIIAIL-YAV---ADQEGASEEDIGLLPKYKFKSIGGSEKISGEKSGPFGGIMN 323
Query: 249 LEAGNSAP----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
L G S+ + ED ECCICL+ Y + E+R+LPCSH FH C+D+WLRI + CPLCK
Sbjct: 324 LCTGESSTERVLSAEDAECCICLSTYDDGVELRELPCSHHFHCTCIDKWLRINATCPLCK 383
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 41/250 (16%)
Query: 84 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 143
+E P P+R+WI GY + CLL + ++ Y++ A GF + R++ S +
Sbjct: 99 RERPSTPLRLWISGYGLQCLLHVGFVFFEYQRSMAHH--GF------EDRTAHRS----I 146
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 199
M + + + ++W+V G W+ Q +P L+ L + LA++ F
Sbjct: 147 MKRLESMNTMTSSVWWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMAC 206
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR--------------V 245
++F LCCC+P+++ Y M +GAS++ I LP + +++ +
Sbjct: 207 VIFFSLCCCIPIVA--FAYAMT---TREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPI 261
Query: 246 DSNLEAGNS------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
S +E NS A ED ECCICL++Y++ E+ LPC+H FH C+ +WLRI +
Sbjct: 262 GSTVELDNSHRIKELALHPEDSECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINAT 321
Query: 300 CPLCKQELER 309
CPLCK + +
Sbjct: 322 CPLCKSNIRQ 331
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 148/317 (46%), Gaps = 62/317 (19%)
Query: 44 PSFLIR--TAMRIS-RASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS ++R A ++ R S W + L+LL L + + L+ + +E P P+R+W
Sbjct: 49 PSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPLRVW 108
Query: 95 IVGYDIGCLLSLLLLYGRY----RQLYAS---------------QVD---GFSLPDVEQQ 132
I GY + CLL ++ + Y RQ S QV+ G + + E
Sbjct: 109 IAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETG 168
Query: 133 RSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNA 192
R + R S + + + +F W+++G W+ + AP L+ LCI LA++
Sbjct: 169 RQETEER-SSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDV 227
Query: 193 LSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN 248
+F ++ + +CCC+P I ++L N GAS+ +I+ LP +R+ R+ +
Sbjct: 228 FFVAFCAAVACMIGIAVCCCLPCIIAILYAVAN----QDGASETEINLLPKYRFCRIGPS 283
Query: 249 LEAGNSAP---------------------ANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
E NS ED ECCICL+ Y++ E+ +LPC+H FH
Sbjct: 284 -EKNNSEKSPSYGGVMTLICGESTSERVLGAEDAECCICLSAYEDGVELYELPCNHHFHC 342
Query: 288 KCVDQWLRILSCCPLCK 304
C+ +WLRI + CPLCK
Sbjct: 343 GCIAKWLRINATCPLCK 359
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 40/249 (16%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS 141
+ KE P P+R+WI GY + CL+ ++L++ YR+ + DVE ++
Sbjct: 60 TAKERPNTPIRLWICGYSLQCLVHVILVWLEYRRRNTRRGR-----DVESEQ-------- 106
Query: 142 HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLL 201
H +C + + +W+++G WV Q AP L+ L + LA++ F +L
Sbjct: 107 HFTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCVVL 166
Query: 202 FLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-----LEAG 252
L LCCC+P I ++L Y + A +GAS+ +S LP ++Y + + + AG
Sbjct: 167 ACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSILPKYKYLVMGNEEKRPRVGAG 222
Query: 253 NSAPAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 298
P ED ECCICL+ Y++ E+ LPC+H FH C+ +WL++ +
Sbjct: 223 KMVPVETSSGYLSTERVLLPEDAECCICLSPYEDGAELHALPCNHHFHAMCIVKWLKMNA 282
Query: 299 CCPLCKQEL 307
CPLCK +
Sbjct: 283 TCPLCKYNI 291
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 134/258 (51%), Gaps = 39/258 (15%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP------DVEQQRSS 135
SK+E P P+R+WIVGY + CL+ ++ + YR+ + G S P + S
Sbjct: 99 SKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVAHLSAGSES 158
Query: 136 EDSRFSHLMNKCRTSLELFFA-IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALS 194
E +H ++K S F+ +W+V+G W+ Q +P L+ L + LA++
Sbjct: 159 EIDMEAHSLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVVFLAFDVFF 218
Query: 195 Y----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-- 248
+ ++ + +CCC+P I ++L Y + A +GAS++ I+ +P ++++R S
Sbjct: 219 VVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASEEDINLIPRFKFRRSGSIDT 274
Query: 249 --LEAGNSAPA--------------------NEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+E + AP+ +ED ECCICL+ Y + E+R+LPC+H FH
Sbjct: 275 CIIEKADKAPSLGGIMALVGSSDPSSERGLSSEDAECCICLSPYDDGVELRELPCNHHFH 334
Query: 287 LKCVDQWLRILSCCPLCK 304
C+D+WLRI + CPLCK
Sbjct: 335 CSCIDKWLRINATCPLCK 352
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 134/258 (51%), Gaps = 39/258 (15%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP------DVEQQRSS 135
SK+E P P+R+WIVGY + CL+ ++ + YR+ + G S P + S
Sbjct: 99 SKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVGHLSAGSES 158
Query: 136 EDSRFSHLMNKCRTSLELFFA-IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALS 194
E +H ++K S F+ +W+V+G W+ Q +P L+ L + LA++
Sbjct: 159 EIDMEAHSLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVVFLAFDVFF 218
Query: 195 Y----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-- 248
+ ++ + +CCC+P I ++L Y + A +GAS++ I+ +P ++++R S
Sbjct: 219 VVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASEEDINLIPRFKFRRSGSIDT 274
Query: 249 --LEAGNSAPA--------------------NEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+E + AP+ +ED ECCICL+ Y + E+R+LPC+H FH
Sbjct: 275 CIIEKADKAPSLGGIMALVGSSDPSSERGLSSEDAECCICLSPYDDGVELRELPCNHHFH 334
Query: 287 LKCVDQWLRILSCCPLCK 304
C+D+WLRI + CPLCK
Sbjct: 335 CSCIDKWLRINATCPLCK 352
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 155/357 (43%), Gaps = 71/357 (19%)
Query: 9 SDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRI---SRASTW----- 60
SD L NS A R A R R PS ++R A R S W
Sbjct: 27 SDDLNNSGRRRRQRLLQAARFLRQASGRRTMRE--PSVVVREAAAEQLEERQSDWAYSKP 84
Query: 61 -MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY------ 113
+ L+++ + + L +S+ E+P P+R+WI GY + C+L ++ + Y
Sbjct: 85 VVILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRF 144
Query: 114 ----------------------RQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSL 151
R+ S V G S + Q S HL ++
Sbjct: 145 QRSSSSNAVAGSDRIGSGNFSSREGSRSAVSGSSYVSLAQFDEESTSVAKHL----ESAN 200
Query: 152 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCC 207
+F IW+++G WV Q +P L+ LCI L ++ + ++ + +CC
Sbjct: 201 TMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCC 260
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEA--GNSAP--------- 256
C+P I ++L Y + A +GAS + I +L +++++V+SN + N P
Sbjct: 261 CLPCIIALL-YAV---ADQEGASKEDIEQLSKFKFRKVESNEKQTDNNQGPVGGIMTECR 316
Query: 257 ---------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
A ED ECCICL+ Y + E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 317 ADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 373
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 154/349 (44%), Gaps = 50/349 (14%)
Query: 4 RYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAG---APSFLIRTAMRIS---RA 57
R S PS + + +V SS PP+ R G PS ++ A + R
Sbjct: 14 RRSSPSSNTNADADSVNLSSPPPSAARPSRLAALIGRVGWPRGPSMMVHEATTLQLHRRR 73
Query: 58 STW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYG 111
+ W +TL++ + + L+ S K+SP+ P+R+W+VGY CL+ + +++
Sbjct: 74 ADWAHSRPVVTLDIAWNVACAAAAALVLASSAKDSPVKPLRLWLVGYAAQCLVHVGIVFT 133
Query: 112 RY----RQLY--ASQVDGFSLPDVEQQRSSED-----SRFSHLMNKCRTSLELFFAIWFV 160
R R + AS V+ SED R SH ++C T L +W++
Sbjct: 134 RLETRARHAWGPASDVESAGAGTDSSGTDSEDDETAEGRSSH-ASRCETINRLISFLWWI 192
Query: 161 MGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVL 216
+G W+ AP L+ L I LA++ F + + LCCC+P + ++L
Sbjct: 193 IGFYWLVSGGEVLEYGAPRLYWLTIVFLAFDVFFAVFCVAMSCFIGIALCCCLPCVVAIL 252
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRV------------------DSNLEAGNSAPAN 258
Y + A GASD IS LP +RY +S +
Sbjct: 253 -YAL---AGKVGASDGDISVLPRYRYYDPSEDSEEETDEGLMIPILNNSGMSTSERILLR 308
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED ECC+CL+ Y++ E+ LPC H FH C+ WLR+ + CPLCK +
Sbjct: 309 EDAECCVCLSSYEDGAELSALPCRHHFHWSCITTWLRMNATCPLCKYNI 357
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 50/308 (16%)
Query: 43 APSFLIR-TAMRI--SRASTW------MTLELL--ALLVQISIITFTLSISKKESPIWPM 91
APS L+R TA R R W + ++L A LV S + ++ +E P P+
Sbjct: 51 APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTV--EERPNEPI 108
Query: 92 RIWIVGYDIGCLLSLLLLYGRY---------RQLYASQVDGFSLPDVEQQRSSEDSRFSH 142
R+WI Y + CL ++L++ Y R L + + +++ +Q S ++S
Sbjct: 109 RVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYS 168
Query: 143 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 202
+ +C + + IW+++G WV + APNL+ L + LA + F +L
Sbjct: 169 FVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLA 228
Query: 203 LL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 258
L LCCC+P I ++L Y + A +G S+ ++ LP +++K SN E + P
Sbjct: 229 CLVGIALCCCLPCIIALL-YAV---AGTEGVSEAELGVLPLYKFKAFHSN-EKNITGPGK 283
Query: 259 -------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
ED +CCICL+ Y++ E+ LPC+H FH C+ +WL++ +
Sbjct: 284 MVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRAT 343
Query: 300 CPLCKQEL 307
CPLCK +
Sbjct: 344 CPLCKYNI 351
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 43/288 (14%)
Query: 56 RASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL 109
R S W + +++L L + I L +S +E P P R WIV Y + C ++ +
Sbjct: 80 RQSDWGYSKPVVVIDVLWSLAIVIIAVGVLGLSLEEKPRVPFRAWIVAYILLCSCHVVCV 139
Query: 110 YGRYRQ-----LYASQV---DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVM 161
YR+ L S + D D Q+S D + + + + +++ F IW+++
Sbjct: 140 VVEYRKRRNLGLRESGILSSDSGDSLDFSTQQSENDGQNTSVAKRVESAMTTFSIIWWII 199
Query: 162 GNVWVFDS-RFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVL 216
G WV + R + +P L+ LCI+ LA + L + L+ + +CC +P I +L
Sbjct: 200 GFYWVTTAGRQNVAKDSPQLYWLCIAFLAADTLFVIICIAVACLIGIAVCCFLPCIIGIL 259
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDS----NLEAGNS----------------AP 256
Y M A +GA+ ++I RL +++ R+ + N E+ S A
Sbjct: 260 -YAM---ADQEGATKEEIDRLLKYKFHRIGNCEKVNDESQESFGGMMTECDTDTPIERAL 315
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ ED ECCICL+ Y++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 316 SREDTECCICLSAYEDGSELRELPCGHHFHCMCIDKWLCINATCPLCK 363
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 139/275 (50%), Gaps = 57/275 (20%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------LYASQVDG------------ 123
S++ESP P+R WIVGY + C+L ++ + YR+ ++ S+ DG
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 124 ------FSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGS 173
+L +V++ S + +F L++ LE +F IW+++G WV
Sbjct: 169 GDSSQYVTLANVDEHHS-QTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGGQAL 227
Query: 174 FQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA 229
+ +P L+ LCI L ++ + ++ + +CCC+P I ++L Y + A +GA
Sbjct: 228 ARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGA 283
Query: 230 SDDQISRLPSWRYKRV------DSNL---------EAGNSAP-----ANEDPECCICLAK 269
S + I +L +++++V D ++ E G AP + ED ECCICL+
Sbjct: 284 SKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSA 343
Query: 270 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
Y + E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 344 YDDGVELRELPCGHHFHCTCVDKWLYINATCPLCK 378
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 46/250 (18%)
Query: 84 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 143
+E P P+R+WI GY + CLL + + ++R+ R+ + R S +
Sbjct: 9 QERPSRPLRVWIFGYALQCLLHVGFVCFQFRR-----------------RNGNEDRHSSI 51
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 199
+ + + +F ++W+V G W+ Q +P L+ L + LA++ F
Sbjct: 52 VKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMAC 111
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY------KRVDSN----- 248
+ F L CC+PL + + Y M + +GAS+D I LP +R+ ++VD +
Sbjct: 112 IFFFALFCCIPL--AAIAYAMKI---REGASEDDIRLLPRYRFCDASLVRKVDDDKKQAL 166
Query: 249 ---LEAGNSAPAN------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
+E G+S+ + ED ECCICL++Y + E+ LPC+H FH C+ +WLRI +
Sbjct: 167 EAAVELGSSSSISDLALHPEDSECCICLSRYVDGAELYILPCNHHFHCGCISRWLRINAT 226
Query: 300 CPLCKQELER 309
CPLCK + R
Sbjct: 227 CPLCKFNILR 236
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 147/315 (46%), Gaps = 50/315 (15%)
Query: 35 NRPAARAGAPSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKE 85
R R G PS L+R TA R R + W + L+++ + + + L + +E
Sbjct: 1980 GRATGRRG-PSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARE 2038
Query: 86 SPIWPMRIWIVGYDIGCLLSLLLLYGRY-----------RQLYASQVDGFSLPDVEQQ-- 132
P P+R+WI GY + C + ++L++ Y Q Q + D E +
Sbjct: 2039 RPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDG 2098
Query: 133 RSSEDSRF--SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAW 190
SS F S + +C + + +W+++G WV Q AP L+ L + LA+
Sbjct: 2099 NSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAF 2158
Query: 191 NALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK--- 243
+ F L+ + LCCC+P I ++L Y + A +GAS+ +S LP +R++
Sbjct: 2159 DVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSMLPRYRFEANN 2214
Query: 244 RVDSNLEAGNSAPAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
S + AG P ED ECCICL+ Y++ E+ LPC+H FH C
Sbjct: 2215 EEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTC 2274
Query: 290 VDQWLRILSCCPLCK 304
+ +WL++ + CPLCK
Sbjct: 2275 IAKWLKMNATCPLCK 2289
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 34/247 (13%)
Query: 85 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLM 144
E P P+R+WIVGY + CLL +L + YR+ + +Q+ + ++ ++
Sbjct: 113 ERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR---------NADQEGAGDEDLKLSIV 163
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----L 200
++ +F IW+++G WV AP L+ L I LA++ F +
Sbjct: 164 KHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACV 223
Query: 201 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN 258
+ + +CCC+P I ++L Y + + +GAS+D I+ L ++++ + L AG +AP
Sbjct: 224 IGIAVCCCLPCIIAIL-YAVTDQVSQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVG 282
Query: 259 ------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + C
Sbjct: 283 GVMTECGTNPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATC 342
Query: 301 PLCKQEL 307
PLCK ++
Sbjct: 343 PLCKFDI 349
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 50/314 (15%)
Query: 35 NRPAARAGAPSFLIR-TAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKE 85
R R G PS L+R TA R R + W + L+++ + + + L + +E
Sbjct: 36 GRATGRRG-PSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARE 94
Query: 86 SPIWPMRIWIVGYDIGCLLSLLLLYGRY-----------RQLYASQVDGFSLPDVEQQ-- 132
P P+R+WI GY + C + ++L++ Y Q Q + D E +
Sbjct: 95 RPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRRVRDEEQQQQPQHSDSDVNDSEDEDG 154
Query: 133 RSSEDSRF--SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAW 190
SS F S + +C + + +W+++G WV Q AP L+ L + LA+
Sbjct: 155 NSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAF 214
Query: 191 NALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVD 246
+ F +L L LCCC+P I ++L Y + A +GAS+ +S LP +R++ +
Sbjct: 215 DVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSMLPRYRFEANN 270
Query: 247 ---SNLEAGNSAPAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
S + AG P ED ECCICL+ Y++ E+ LPC+H FH C
Sbjct: 271 EEKSGVGAGTMFPTETSSGYLANERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTC 330
Query: 290 VDQWLRILSCCPLC 303
+ +WL++ + CPLC
Sbjct: 331 IAKWLKMNATCPLC 344
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 49/261 (18%)
Query: 84 KESPIWPMRIWIVGYDIGCLLS---LLLLYGRYRQLYASQVDGFSLPD------------ 128
+E P P+R+WI+GY + L+ ++L + R R+ + D L +
Sbjct: 102 EEEPCVPLRVWILGYLLQGLVHSVCVVLEFRRRRRGSYLEDDDSVLENGLRWSFSSESDS 161
Query: 129 --VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCIS 186
+ S E+S H+ ++ + IW+++G WV + +P L+ LCI+
Sbjct: 162 DFASEHESEENSIIKHI----ESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCIT 217
Query: 187 LLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY 242
LA++ + L+ + +CCC+P I ++L AD+GA+ ++I +LP +++
Sbjct: 218 FLAFDVVIVVICVAVACLIGIAVCCCLPCILAIL-----YAVADQGATMEEIDQLPKYKF 272
Query: 243 KRVDSNLEAGNSAPAN-------------------EDPECCICLAKYKEKEEVRKLPCSH 283
+ + + E G++ ++ ED ECCICL+ Y + E+R+LPC+H
Sbjct: 273 RMIKESKEEGDAQESSRGVMTECDNDTASEHVIALEDAECCICLSAYDDGAELRELPCNH 332
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH C+D+WL I + CPLCK
Sbjct: 333 HFHCTCIDKWLLICATCPLCK 353
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 41/250 (16%)
Query: 84 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 143
+E P P+R+WI GY + CLL + ++ Y++ A GF + R++ S +
Sbjct: 27 RERPSTPLRLWISGYGLQCLLHVGFVFFEYQRSMAHH--GF------EDRTAHRS----I 74
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 199
M + + + ++W+V G W+ Q +P L+ L + LA++ F
Sbjct: 75 MKRLESMNTMTSSVWWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMAC 134
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR--------------V 245
+ F LCCC+P+++ Y M +GAS++ I LP + +++ +
Sbjct: 135 VXFFSLCCCIPIVA--FAYAMT---TREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPI 189
Query: 246 DSNLEAGNS------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
S +E NS A ED ECCICL++Y++ E+ LPC+H FH C+ +WLRI +
Sbjct: 190 GSTVELDNSHRIKELALHPEDSECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINAT 249
Query: 300 CPLCKQELER 309
CPLCK + +
Sbjct: 250 CPLCKSNIRQ 259
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 150/332 (45%), Gaps = 64/332 (19%)
Query: 31 RMARNRPAARAGAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSI 81
R A R R PS L+R A R S W + L+++ L + + L +
Sbjct: 48 RQASGRRMMRE--PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVL 105
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLY------ASQV-------------- 121
S E+P P+R+WIVGY + C+L ++ + YR+ AS V
Sbjct: 106 SASEAPGMPLRLWIVGYAMQCVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSSSGNLSVS 165
Query: 122 --DGFSLPDVEQQR---SSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQR 176
+G + Q D + + ++ +F +W+++G WV Q
Sbjct: 166 SREGSASASASAQNVLLGQLDDESTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQD 225
Query: 177 APNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 232
+P L+ LCI L ++ + ++ + +CCC+P I ++L Y + +GAS +
Sbjct: 226 SPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALL-YAVT---DQEGASKE 281
Query: 233 QISRLPSWRYKRVDSNLEAGNS--------------------APANEDPECCICLAKYKE 272
I +L ++++R++SN + + A A ED ECCICL+ Y +
Sbjct: 282 DIEQLSKFKFRRIESNEKLTGTIQGPVGGIMTECQADSPIEHALAEEDAECCICLSSYDD 341
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 342 GVELRELPCGHHFHCVCVDKWLYINATCPLCK 373
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 46/265 (17%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------LYASQVDGFSLPDVEQQRSS 135
S++ESP P+R WIVGY + C+L ++ + YR+ ++ S+ DG
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 136 EDS----RFSHLMNKCRTSL--------ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVL 183
DS + L ++ TS+ +F IW+++G WV + +P L+ L
Sbjct: 169 GDSSQYVTLASLGDESSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWL 228
Query: 184 CISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 239
CI L ++ + ++ + +CCC+P I ++L Y + A +GAS + I +L
Sbjct: 229 CIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASKEDIDQLSR 284
Query: 240 WRYKRV------DSNL---------EAGNSAP-----ANEDPECCICLAKYKEKEEVRKL 279
+++++V D ++ E G AP + ED ECCICL+ Y + E+R+L
Sbjct: 285 FKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELREL 344
Query: 280 PCSHMFHLKCVDQWLRILSCCPLCK 304
PC H FH CVD+WL I + CPLCK
Sbjct: 345 PCGHHFHCTCVDKWLYINATCPLCK 369
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS 141
S ESP P+R+WI GY + CLL +L + YR+ D +Q+ + ++
Sbjct: 110 STGESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRSR---------DADQEGAGDEDFKL 160
Query: 142 HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF-- 199
++ ++ +F IW+++G WV AP L+ L I LA++ F
Sbjct: 161 SVVKHLESANTMFSFIWWIVGFYWVSAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVAL 220
Query: 200 --LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSA 255
++ + +CCC+P I ++L + +GAS+D I+ L ++++ + L AG +A
Sbjct: 221 ACVIGIAVCCCLPCIIAIL---YAVTDQQEGASEDDINNLSKFKFRTMSDADKLAAGIAA 277
Query: 256 PAN------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRIL 297
P ED ECCICL Y++ E+R+LPC+H FH C+D+WL I
Sbjct: 278 PVGGVMTECGTNPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHIN 337
Query: 298 SCCPLCK 304
+ CPLCK
Sbjct: 338 ATCPLCK 344
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 57/334 (17%)
Query: 23 SSPPATEDRMAR-----NRPAARAGAPSFLIRTAMRIS----RASTWMTLELLALLVQIS 73
+SPP + R +R R A R G PS L+R + RA + +LAL + +
Sbjct: 35 ASPPPSAVRPSRLAALIGRAAGRRG-PSMLVRETAALQLQRRRADWAHSRPVLALDIAWN 93
Query: 74 IITFTLSISK-----KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPD 128
+ + + +ESP+ P+R+W+VGY CL+ + L+ R+ S D
Sbjct: 94 VAFAAAAAAVLSSSAEESPVKPLRLWVVGYAAQCLVHVGLVCADTRRETRRARRSAS--D 151
Query: 129 VEQQRSS-------------EDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQ 175
VE + + R S+ +C T L +W+++G W+F
Sbjct: 152 VESAGAGTDSSDADSEDDERAEGRSSY-TGRCETMNTLISFLWWIIGFYWIFSGGEVLEH 210
Query: 176 RAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASD 231
AP L+ L I LA++ F + + LCCC+P + ++L Y + A +GASD
Sbjct: 211 GAPRLYWLTIVFLAFDVFFAVFCVAVACFIGIALCCCLPCVIAIL-YAL---AGQEGASD 266
Query: 232 DQISRLPSWRYKRVDSNLEAG-----------NSAPAN-------EDPECCICLAKYKEK 273
IS L +RY + E G NS + ED ECCICL+ Y++
Sbjct: 267 ADISVLLRYRYSDPSEDGEKGVDEGLMIPILNNSGMSTSERILLREDAECCICLSSYEDG 326
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 327 AELSALPCNHHFHWPCITKWLRMNATCPLCKYNI 360
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 149/327 (45%), Gaps = 62/327 (18%)
Query: 31 RMARNRPAARAGAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSI 81
R A R R PS ++R A R S W + L++L ++ +
Sbjct: 49 RQASGRRLMRE--PSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVFIL 106
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ--------------------LYASQV 121
S+ E+P P+R+WIVGY + C+L + + Y++ L +
Sbjct: 107 SRNENPNMPLRLWIVGYALQCVLHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPPSM 166
Query: 122 DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLH 181
DG Q + + + T +F IW+V+G WV + +P L+
Sbjct: 167 DGSGHYVSLAQFDDDGISMAKHLESANT---MFSFIWWVVGFYWVSADSESLVRDSPLLY 223
Query: 182 VLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRL 237
LCI+ L ++ F ++ + +CCC+P I ++L Y + A +GAS + I +L
Sbjct: 224 WLCIAFLGFDVFFVVFCMALACIVGIAVCCCLPCIIALL-YAV---ADQEGASKEDIEQL 279
Query: 238 PSWRYKRVDSNLE-AGNSAPA-------------------NEDPECCICLAKYKEKEEVR 277
++++R ++N + AGN+ A +ED ECCICL+ Y + E+R
Sbjct: 280 SKFKFQRTETNEKLAGNTQGAAGGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELR 339
Query: 278 KLPCSHMFHLKCVDQWLRILSCCPLCK 304
+LPC H FH CVD+WL I + CPLCK
Sbjct: 340 QLPCGHHFHCACVDKWLHINATCPLCK 366
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 64/346 (18%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAAR----AGAPSFLIRTAMR---------------- 53
++S + P SPP + P R GA F+ RT R
Sbjct: 14 SASPSAPLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAE 73
Query: 54 --ISRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLS 105
R + W + L++L L +++ L+ S E P P+R+WIVGY + CLL
Sbjct: 74 HLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVLQCLLH 133
Query: 106 LLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVW 165
+L + YR+ + +Q+ + ++ ++ ++ +F IW+++G W
Sbjct: 134 VLSVTVEYRRRRR---------NADQEGAGDEDLKLSIVKHLESANTMFSFIWWIVGFYW 184
Query: 166 VFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMN 221
V AP L+ L I LA++ F ++ + +CCC+P I ++L
Sbjct: 185 VSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL---YA 241
Query: 222 MGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN------------------EDP 261
+ +GAS+D I+ L ++++ + L AG +AP ED
Sbjct: 242 VTDQQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDA 301
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK ++
Sbjct: 302 ECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 347
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 65/346 (18%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAAR----AGAPSFLIRTAMR---------------- 53
++S + P SPP + P R GA F+ RT R
Sbjct: 14 SASPSAPLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAE 73
Query: 54 --ISRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLS 105
R + W + L++L L +++ L+ S E P P+R+WIVGY + CLL
Sbjct: 74 HLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVLQCLLH 133
Query: 106 LLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVW 165
+L + YR+ + +Q+ + ++ ++ ++ +F IW+++G W
Sbjct: 134 VLSVTVEYRRRRR---------NADQEGAGDEDLKLSIVKHLESANTMFSFIWWIVGFYW 184
Query: 166 VFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMN 221
V AP L+ L I LA++ F ++ + +CCC+P I ++L Y +
Sbjct: 185 VSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAVT 243
Query: 222 MGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN------------------EDP 261
+GAS+D I+ L ++++ + L AG +AP ED
Sbjct: 244 ---DQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDA 300
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK ++
Sbjct: 301 ECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 346
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 65/322 (20%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R S W + L+++ L +S+ T L +S+ E PI P+R+W
Sbjct: 4 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRNEHPIMPLRVW 63
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVD-------------------------GFSLPDV 129
++GY + C+L ++ + YR+ + + G
Sbjct: 64 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTPRSRSSSSSSSSSSLEEDALGSRRNSG 123
Query: 130 EQQRS--SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISL 187
EQ S D+ S + ++ +F IW+++G WV Q +P ++ L I
Sbjct: 124 EQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVF 183
Query: 188 LAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK 243
L ++ + ++ + +CCC+P I +VL Y + A +GAS + I +L ++++
Sbjct: 184 LGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---ADQEGASKEDIEQLTKFKFR 239
Query: 244 RV-DSNLEAGNSAPA--------------------NEDPECCICLAKYKEKEEVRKLPCS 282
+V D+N G+ A ED ECCICL+ Y++ E+R+LPC
Sbjct: 240 KVGDANRHTGDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCG 299
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H FH CVD+WL I + CPLCK
Sbjct: 300 HHFHCSCVDKWLYINATCPLCK 321
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 41/270 (15%)
Query: 72 ISIITFTLSISKKESPIWPMRIWIVGYDI-GCLLSLLLLYGRYRQLYASQVDG-FSLPDV 129
++I L++S E P P+R WIVGY + G L SL ++ R+ + + G S +V
Sbjct: 91 LAIGASVLALSADEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRTATISGTHSGSNV 150
Query: 130 EQQRSSE-DSRF-----------SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRA 177
E SSE D F + + ++ + IW+++G WV + +
Sbjct: 151 EWSFSSESDEEFYPSEQFLEGDGNSITKHIESANTMLSFIWWIVGFYWVTAGGQSLTRDS 210
Query: 178 PNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQ 233
P L+ LCI+ L+++ + + L+ + +CCC+P I ++L + A +GA+ ++
Sbjct: 211 PQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAIL----YVVADQEGATKEE 266
Query: 234 ISRLPSWRYK-----RVDSNLE--------------AGNSAPANEDPECCICLAKYKEKE 274
I +LP +++ + + ++E A A ED ECCICL+ Y +
Sbjct: 267 IEQLPKYKFIIIKEFKKEGDIEESSRGIMTESESETATEHVIALEDAECCICLSAYDDGA 326
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 327 ELRELPCNHHFHCTCIDKWLLINATCPLCK 356
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 46/308 (14%)
Query: 35 NRPAARAGAPSFLIRTAMRI--SRASTW------MTLELLALLVQISIITFTLSISKKES 86
R + R GA + TA + R + W + L++L + + L + K+E
Sbjct: 35 GRASGRRGASMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVVVAIVMLLVFKEEK 94
Query: 87 PIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSS-------EDSR 139
P P+R+WI GY I CL+ ++L++ +R+ A G D+E + S ED+
Sbjct: 95 PNVPIRVWICGYAIQCLVHVVLVWLEFRKRNARTRTG----DLEAAQGSGNHDSEDEDND 150
Query: 140 FSHLMNK-CRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 198
L K C + + IW++ G W+ Q A +L+ L LA++ F
Sbjct: 151 ERILSTKTCESMNTIISFIWWIAGFYWLVSGGDILLQNATHLYWLTFIFLAFDVFFAIFC 210
Query: 199 FLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN------ 248
+L L LCCC+P I ++L Y + A +GAS+ +S LP +R++ ++++
Sbjct: 211 VVLACLIGIALCCCLPCIIALL-YAV---AGQEGASEADLSILPKYRFQALNNDEKQSDG 266
Query: 249 ------LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRI 296
+EAG+ E D +CCICL+ Y++ E+ L C+H FH C+ +WL++
Sbjct: 267 GGKMIPVEAGSENMGKERVLLPEDADCCICLSSYEDGAELVSLSCNHHFHSTCIVKWLKM 326
Query: 297 LSCCPLCK 304
+ CPLCK
Sbjct: 327 NATCPLCK 334
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 54/329 (16%)
Query: 27 ATEDRMARNRPAARAGAPSFLIRTAMRISRASTW------MTLELLALLVQISIITFTLS 80
A+ RM P+ R + A R S W + L++ V ++I L+
Sbjct: 47 ASGRRMMLREPSVRMREAA----AAEVEGRQSEWAYSRPVVALDVAWNAVFLAIGASVLA 102
Query: 81 ISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFS-----LPDVEQQRSS 135
+S E P P+R WIVGY + L L + + + +V G + V+ SS
Sbjct: 103 LSTDEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRRRVSGTHPGSNVVGHVQWSFSS 162
Query: 136 E-DSRF-----------SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVL 183
E D F + + T + IW+++G WV + +P L+ L
Sbjct: 163 ESDEEFYPPEQFLEGDGNSITKHIETVNTMLSFIWWIVGFYWVTAGGQSLTRDSPQLYWL 222
Query: 184 CISLLAWNA----LSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 239
CI+ LA++ + S L+ + +CCC+P I ++L + A +GA+ ++I +LP
Sbjct: 223 CITFLAFDVVIVLICVSVACLIGIAVCCCLPCILAIL----YVVADPEGATKEEIDQLPK 278
Query: 240 WRYK-----RVDSNLE--------------AGNSAPANEDPECCICLAKYKEKEEVRKLP 280
++++ + + ++E A A ED ECCICL+ Y E+R+LP
Sbjct: 279 YKFRIIKEFKKEGDIEESSRGIMTETESETAAEHVIALEDAECCICLSAYDNDAELRELP 338
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQELER 309
C+H FH C+D+WL I + CPLCK + R
Sbjct: 339 CNHHFHCTCIDKWLLINATCPLCKFNILR 367
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 154/335 (45%), Gaps = 59/335 (17%)
Query: 21 YSSSPP--ATEDRMAR--NRPAARAGAPSFLIRTAMRIS---RASTW------MTLELLA 67
+ +SPP A R+A R A R G PS L+R + R + W + L++
Sbjct: 31 HQASPPPAARPSRLAALIGRAAGRRG-PSMLVRETAALQLERRRADWAHSRPVVALDVAW 89
Query: 68 LLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP 127
+ + L+ S ESP P+R+W+VGY + C++ + L+ + + P
Sbjct: 90 NVAFAAAAAAVLAASAAESPAKPLRLWLVGYALQCVVHVSLVCSGPGRRRRAAR--ARGP 147
Query: 128 DVEQQRSSE----------------DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRF 171
DVE ++ D R S + +C + L +W+++G WV
Sbjct: 148 DVESDAANAGPDGSGSEDDDDEEAMDERSSSV-ERCESVNTLVSFLWWIIGFYWVVSGGD 206
Query: 172 GSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADK 227
Q AP L+ L + LA++ F + + LCCC+P + ++L Y + +
Sbjct: 207 MLEQGAPRLYWLTVVFLAFDVFFAVFCVAVACFIGVALCCCLPCVVAIL-YAL---VGQE 262
Query: 228 GASDDQISRLPSWRYKRVDSNLEAG-----------NSAPA-------NEDPECCICLAK 269
GASD I LP ++Y + ++E G NS + NED ECCICL+
Sbjct: 263 GASDADIGVLPRYKYSVANEDVEKGTDEGLMIPILNNSGASTSERILLNEDAECCICLSS 322
Query: 270 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
Y++ E+ LPC+H FH C+ +WLR+ + CPLCK
Sbjct: 323 YEDGVELSALPCNHHFHSTCITKWLRMHATCPLCK 357
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 161/357 (45%), Gaps = 72/357 (20%)
Query: 15 SSTTVPYSSSPPAT---EDRMARNRPAA--------RAG--APSFLIR-TAMRI--SRAS 58
SS T P + P T R R A RAG PS L+R TA R R +
Sbjct: 2 SSQTAPTEAPEPYTPLLRSRTDAGRGPAPALALLLGRAGRRGPSMLVRETAARELEERRA 61
Query: 59 TW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 112
W + L++ + + + L+ + E P P+R+WIVGY + CL+ +LL++
Sbjct: 62 DWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVHVLLVWLE 121
Query: 113 YRQLYASQVDGFSLP--DVEQQR-----------------SSEDSRFSHLMNKCRTSLEL 153
YR+ S DVE ++ SRF+ T +
Sbjct: 122 YRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCESLNTGVSF 181
Query: 154 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL----LCCCV 209
+W+++G WV Q AP L+ L + LA++ F +L L LCCC+
Sbjct: 182 ---LWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 238
Query: 210 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE-----AGNSAPAN------ 258
P I ++L Y + A +GAS+ +S LP +++ R+ S+++ AG+ P
Sbjct: 239 PCIIAIL-YAV---AGQEGASEADLSMLPKYKF-RILSDVDKPSGGAGSMVPIETSSAYL 293
Query: 259 --------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED ECCICL Y++ E+ LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 294 ENERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNI 350
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 151/331 (45%), Gaps = 81/331 (24%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R S W + L+++ L +S+ T L +S+KE PI P+R+W
Sbjct: 75 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVW 134
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYA------------------------------------ 118
++GY + C+L ++ + YR+
Sbjct: 135 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRN 194
Query: 119 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
S V SL ++ + SS + ++ +F IW+++G WV Q +P
Sbjct: 195 SGVQDLSLGHLDTESSS-------VAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 247
Query: 179 NLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
++ L I L ++ + ++ + +CCC+P I +VL Y + A +GAS + I
Sbjct: 248 RIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---ADQEGASKEDI 303
Query: 235 SRLPSWRYKRV-DSN---------------LEAGNSAPA-----NEDPECCICLAKYKEK 273
+L ++++++ D+N E G +P ED ECCICL+ Y++
Sbjct: 304 EQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDG 363
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 364 TELRELPCGHHFHCSCVDKWLYINATCPLCK 394
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 27/244 (11%)
Query: 85 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLM 144
E P P+R W+ GY + CLL +L + Y++ G + V+Q + + ++
Sbjct: 109 ERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCREARSGGA--GVDQDDAGDGDLKISIV 166
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----L 200
+ +F IW+++G WV Q AP L+ L I LA++ F +
Sbjct: 167 KHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALACV 226
Query: 201 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN 258
+ + +CCC+P I ++L Y + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 227 IGIAVCCCLPCIIAIL-YAVTDQVCQEGASEEDINNLSKYKFRTMGEADKLVAGIAAPVG 285
Query: 259 ------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + C
Sbjct: 286 GVMTECGTNPPVEHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCIDKWLHINATC 345
Query: 301 PLCK 304
PLCK
Sbjct: 346 PLCK 349
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 151/331 (45%), Gaps = 81/331 (24%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R S W + L+++ L +S+ T L +S+KE PI P+R+W
Sbjct: 4 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVW 63
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYA------------------------------------ 118
++GY + C+L ++ + YR+
Sbjct: 64 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRN 123
Query: 119 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
S V SL ++ + SS + ++ +F IW+++G WV Q +P
Sbjct: 124 SGVQDLSLGHLDTESSS-------VAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 176
Query: 179 NLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
++ L I L ++ + ++ + +CCC+P I +VL Y + A +GAS + I
Sbjct: 177 RIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---ADQEGASKEDI 232
Query: 235 SRLPSWRYKRV-DSN---------------LEAGNSAPA-----NEDPECCICLAKYKEK 273
+L ++++++ D+N E G +P ED ECCICL+ Y++
Sbjct: 233 EQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDG 292
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 293 TELRELPCGHHFHCSCVDKWLYINATCPLCK 323
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 67/337 (19%)
Query: 31 RMARNRPAARA--GAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTL 79
R+ R+ + R PS L+R A R S W + L+ + L + + T L
Sbjct: 34 RLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVL 93
Query: 80 SISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA--------------------- 118
+S E+P P+R+WI+GY + C++ ++ + YR+ +
Sbjct: 94 VLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSM 153
Query: 119 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSF 174
+ +G L +R E + + N LE + IW+V+G WV
Sbjct: 154 DEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELA 213
Query: 175 QRAPNLHVLCI----SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 230
Q +P L+ LCI + + + ++ + +CCC+P I +VL Y + A +GAS
Sbjct: 214 QGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGAS 269
Query: 231 DDQISRLPSWRYKRVDSNL------------------EAGNSAPA-----NEDPECCICL 267
+ I +L +++++V + E G +P +ED ECCICL
Sbjct: 270 KEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICL 329
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 330 SAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 67/337 (19%)
Query: 31 RMARNRPAARA--GAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTL 79
R+ R+ + R PS L+R A R S W + L+ + L + + T L
Sbjct: 34 RLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVL 93
Query: 80 SISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA--------------------- 118
+S E+P P+R+WI+GY + C++ ++ + YR+ +
Sbjct: 94 VLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSM 153
Query: 119 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSF 174
+ +G L +R E + + N LE + IW+V+G WV
Sbjct: 154 DEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELA 213
Query: 175 QRAPNLHVLCI----SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 230
Q +P L+ LCI + + + ++ + +CCC+P I +VL Y + A +GAS
Sbjct: 214 QGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGAS 269
Query: 231 DDQISRLPSWRYKRVDSNL------------------EAGNSAPA-----NEDPECCICL 267
+ I +L +++++V + E G +P +ED ECCICL
Sbjct: 270 KEDIDQLTKFKFRKVGDTMKHTVDEEQGEGDSGGVMTECGTDSPVEHALPHEDAECCICL 329
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 330 SAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 155/340 (45%), Gaps = 53/340 (15%)
Query: 14 NSSTTVPYSSSPPATE-DRMAR--NRPAARAGAPSFLIRTAMRIS---RASTW------M 61
++ + P S SP A R+A R A R G PS L+R + R + W +
Sbjct: 27 DARSGTPASPSPSAARPSRLAALIGRAAGRRG-PSMLVRETAALQLQRRRADWAHSRPVV 85
Query: 62 TLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQV 121
L++ + + L+ S +ESP+ P+R+W+VGY CL+ + L+ R+
Sbjct: 86 ALDIAWNVAFAAAAAAVLASSAEESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRAR 145
Query: 122 DGFSLPDVEQQRSSEDSRF------------SHLMNKCRTSLELFFAIWFVMGNVWVFDS 169
S DVE + DS S ++C T L +W+++G W+
Sbjct: 146 --GSASDVESAGAGTDSSDADSEDDERAEGRSSRTSRCETMNTLISFLWWIIGFYWLVSG 203
Query: 170 RFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAA 225
AP L+ L + LA++ F + + LCCC+P + ++L Y + A
Sbjct: 204 GEVLEYGAPRLYWLTVVFLAFDVFFAVFCVAVACFIGIALCCCLPCVIAIL-YAL---AG 259
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAG-----------NSAPAN-------EDPECCICL 267
+GASD IS LP +R+ + E G NS + ED ECC+CL
Sbjct: 260 QEGASDADISVLPRYRFSDPSEDGEKGTDEGLMIPILNNSGVSTSERILLREDAECCVCL 319
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 320 SSYEDGAELSALPCNHHFHWTCITKWLRMNATCPLCKYNI 359
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 67/337 (19%)
Query: 31 RMARNRPAARA--GAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTL 79
R+ R+ + R PS L+R A R S W + L+ + L + + T L
Sbjct: 34 RLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVL 93
Query: 80 SISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA--------------------- 118
+S E+P P+R+WI+GY + C++ ++ + YR+ +
Sbjct: 94 VLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSM 153
Query: 119 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSF 174
+ +G L +R E + + N LE + IW+V+G WV
Sbjct: 154 DEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELA 213
Query: 175 QRAPNLHVLCI----SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 230
Q +P L+ LCI + + + ++ + +CCC+P I +VL Y + A +GAS
Sbjct: 214 QGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGAS 269
Query: 231 DDQISRLPSWRYKRVDSNL------------------EAGNSAPA-----NEDPECCICL 267
+ I +L +++++V + E G +P +ED ECCICL
Sbjct: 270 KEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICL 329
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 330 SAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 54/316 (17%)
Query: 35 NRPAARAGAPSFLIRTAMRIS---RASTW------MTLELLALLVQISIITFTLSISKKE 85
R A R G PS L+R + R + W + L++ + + L+ S E
Sbjct: 51 GRAAGRRG-PSMLVRETAALQLDRRRADWAHSRPVVALDVAWNVAFAAAAAAVLAASTAE 109
Query: 86 SPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL-- 143
SP P+R+W+VGY + C++ + L+ R+ A+ G PD+E ++ + S
Sbjct: 110 SPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARG---PDIESGAATAGANSSESDE 166
Query: 144 -------------MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAW 190
++C + + +W+++G WV Q AP L+ L + LA+
Sbjct: 167 GNDEEAMEERASSTDRCESVNTMVSFLWWIIGFYWVVTGGDVLEQGAPRLYWLTVVFLAF 226
Query: 191 NALSYSFPFL----LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVD 246
+ F + + + LCCC+P + ++L Y + +GASD I LP ++Y
Sbjct: 227 DVFFAVFCVVVACFIGVALCCCLPCVVAIL-YAL---VGQEGASDADIGVLPRYKYSDPS 282
Query: 247 SNLEAG-----------NSAPAN-------EDPECCICLAKYKEKEEVRKLPCSHMFHLK 288
N E G NS + ED ECCICL+ Y++ E+ LPC+H FH
Sbjct: 283 ENGEKGTDEGVMIPILNNSGTSTSERILLREDAECCICLSSYEDGVELSALPCNHHFHSM 342
Query: 289 CVDQWLRILSCCPLCK 304
C+ +WLR+ + CPLCK
Sbjct: 343 CITKWLRMHANCPLCK 358
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 37/269 (13%)
Query: 72 ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQ 131
+ + L+ + KE+P P+R WI GY + CLL + L++ YR+ + D S +++
Sbjct: 74 VVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRNDAPGDEDSAANLDY 133
Query: 132 QRSSEDSRFS----------HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLH 181
++ +C + + +W+++G WV Q AP L+
Sbjct: 134 DDVNDSDEDDVGTSGSSSSTGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLY 193
Query: 182 VLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRL 237
L + LA++ F +L L LCCC+P I ++L Y + A +GAS+ +S L
Sbjct: 194 WLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASESDLSIL 249
Query: 238 PSWRYKRVDSN-------------LEAGNSAPANE------DPECCICLAKYKEKEEVRK 278
P +R++ + + +E N NE D ECCIC++ Y++ E+
Sbjct: 250 PKYRFQMLSNEETPGEGGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHV 309
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 310 LPCNHHFHSTCIVKWLKMNATCPLCKYNI 338
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 36/261 (13%)
Query: 79 LSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQR----- 133
L+ + KE+P P+R WI GY + CL+ + L++ YR+ + D S ++
Sbjct: 81 LACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSD 140
Query: 134 -----SSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLL 188
+S S S +C + + +W+++G WV Q AP L+ L + L
Sbjct: 141 EDDVGTSGSSSSSGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFL 200
Query: 189 AWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR 244
A++ F +L L LCCC+P I ++L Y + A +GAS+ +S LP +R++
Sbjct: 201 AFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASESDLSILPKYRFQL 256
Query: 245 VDSN------------LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFH 286
+ + +E N NE D ECCIC++ Y++ E+ LPC+H FH
Sbjct: 257 LSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFH 316
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
C+ +WL++ + CPLCK +
Sbjct: 317 STCIVKWLKMNATCPLCKYNI 337
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 30/244 (12%)
Query: 85 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLM 144
E P P+R W+ GY + CLL +L + Y++ G + V+Q + + ++
Sbjct: 109 ERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCREARSGGA--GVDQDDAGDGDLKISIV 166
Query: 145 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----L 200
+ +F IW+++G WV Q AP L+ L I LA++ F +
Sbjct: 167 KHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALACV 226
Query: 201 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN 258
+ + +CCC+P I ++L Y + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 227 IGIAVCCCLPCIIAIL-YAVT---DQEGASEEDINNLSKYKFRTMGEADKLVAGIAAPVG 282
Query: 259 ------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + C
Sbjct: 283 GVMTECGTNPPVEHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCIDKWLHINATC 342
Query: 301 PLCK 304
PLCK
Sbjct: 343 PLCK 346
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 62/330 (18%)
Query: 31 RMARNRPAARAGAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSI 81
R A R R PS L+R A R S W + L+++ + + L +
Sbjct: 48 RRASGRRMMRE--PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVL 105
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA----------SQVDGFSLPDVEQ 131
S E+P P+R+WIVGY + C+L ++ + YR+ +V S
Sbjct: 106 SASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVS 165
Query: 132 QRSSE-------------DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
R D + + ++ +F +W+++G WV Q +P
Sbjct: 166 SREGSASGSAQYVSLGQLDDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSP 225
Query: 179 NLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
L+ LCI L ++ + ++ + +CCC+P I ++L Y + A +GAS + I
Sbjct: 226 QLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALL-YAV---ADQEGASKEDI 281
Query: 235 SRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPECCICLAKYKEKE 274
+L ++++R++SN E +P A ED ECCICL+ Y +
Sbjct: 282 EQLSKFKFRRIESNEKLTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGV 341
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 342 ELRELPCGHHFHCVCVDKWLYINATCPLCK 371
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 44/255 (17%)
Query: 90 PMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRS----------SEDSR 139
P+R W+ GY + C++ ++ + YR + + D E+ +ED R
Sbjct: 2 PLRTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDR 61
Query: 140 FSH------LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL 193
+ ++ +F IW+++G W+ + AP L+ LCI LA++
Sbjct: 62 RGSCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVF 121
Query: 194 SYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN- 248
F ++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R D
Sbjct: 122 FVVFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPE 177
Query: 249 --------------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
E G + P A ED ECCICL+ Y + E+R+LPC H FH C
Sbjct: 178 KQTADETGPFGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCAC 237
Query: 290 VDQWLRILSCCPLCK 304
+D+WL I + CPLCK
Sbjct: 238 IDKWLHINATCPLCK 252
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 148/311 (47%), Gaps = 54/311 (17%)
Query: 44 PSFLIRTAMRIS---RASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R + R S W + L+L+ L + + L +SKKE+ +RIW
Sbjct: 23 PSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVQVSLAVLVLSKKETNCNELRIW 82
Query: 95 IVGYDIGCLLSLLLLYGRY----RQLYAS----QVDGFSLPDVEQQRSSEDSRF------ 140
I+GY + C++ +L + Y +Q+ A+ + + + DS F
Sbjct: 83 IIGYALQCVVHMLCVCCEYLRRQQQVNANPSSVSSSNSTYAPINNGENDVDSGFDDDGLS 142
Query: 141 --SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY--- 195
+ + ++ +F +W+V+G W+ AP ++ LC+ L ++
Sbjct: 143 NEASWAKRLESANTMFSFVWWVVGFYWITAGGQSLAVDAPYVYWLCVLFLTFDVFFVVFC 202
Query: 196 -SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE---- 250
+ ++ + +CCC+P I ++L Y + A +GAS++ I+ LP+ +++++ S+ +
Sbjct: 203 VALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASEEDINNLPTAKFRKISSDGKITAN 258
Query: 251 -----------AGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
G S E D ECCICL+ Y++ E+R LPCSH FH C+ +W
Sbjct: 259 YERALAGVMTFVGASENLTERSLFEDDAECCICLSSYEDGVELRDLPCSHHFHSTCIIKW 318
Query: 294 LRILSCCPLCK 304
LRI + CPLCK
Sbjct: 319 LRINATCPLCK 329
>gi|297844460|ref|XP_002890111.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
gi|297335953|gb|EFH66370.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 70/260 (26%)
Query: 57 ASTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL------- 109
S W T+EL+ LVQI L+++K E + W++GY GC+ + L+L
Sbjct: 59 GSLWNTMELVVTLVQIVASLVVLTVAKDEHLQALLLTWVIGYTCGCIANTLVLLLSCVRK 118
Query: 110 YGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDS 169
Y R +++DG +M+ + +E FF +W V+G +W+
Sbjct: 119 YNRIGVYSRTRIDG-------------------VMDALKMGIECFFVVWLVLGILWICYG 159
Query: 170 RFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA 229
S AP L+ LC+ +A++ + +++ LL A +G
Sbjct: 160 H-SSPSDAPKLYRLCVVFIAFSCIRFAYAVLL----------------------CAGEGL 196
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV--RKLPCSHMFHL 287
+ + PS D CCICL KY E+E V RKL CSH+FH
Sbjct: 197 RGGFVFQKPS-------------------HDDCCCICLGKYGEEEGVALRKLECSHVFHS 237
Query: 288 KCVDQWLRILSCCPLCKQEL 307
+C+D+WLRI S CPLC+ ++
Sbjct: 238 ECIDKWLRIKSSCPLCQSQV 257
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 62/283 (21%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYG--RYRQLYASQVD-----------GFSLPD 128
S +ESP+ P+R+W+VGY + CL+ + L+ R R +A D G D
Sbjct: 38 STEESPVTPLRLWLVGYALQCLVHVGLVCSDSRRRPAHARSSDVESADGDAAGAGTDSSD 97
Query: 129 VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP---------- 178
+ + R S +C + + +W+++G WV Q AP
Sbjct: 98 SDDDDEGREQR-SSFAKRCESINTMVSFLWWIIGFYWVVSGGDVLEQDAPRLYWYCGPKP 156
Query: 179 ------------NLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNM 222
N+H+L + LA++ F + + LCCC+P + ++L Y +
Sbjct: 157 VPITDYFMIVQSNVHMLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAIL-YAL-- 213
Query: 223 GAADKGASDDQISRLPSWRYKRVDSNLEAG-----------NSAPA-------NEDPECC 264
A +GASD I LP +RY + + G NS + +ED ECC
Sbjct: 214 -AGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAECC 272
Query: 265 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 273 ICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNI 315
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 84 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 143
E P P+R+W+ GY CLL + ++ +R + D FS + E
Sbjct: 63 NERPSTPLRLWLCGYAFECLLHVAFVFSEFR---VTTRDSFSHTPYSIAKKLEP------ 113
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 199
MN +S +W+V G W+ + +P L+ L + LA++ F
Sbjct: 114 MNTLASS------VWWVFGFYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMAC 167
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR------VDSN----- 248
++F L C +P+I+ L Y + + +GAS+D IS LP +R+ + VD N
Sbjct: 168 IVFFALFCIIPIIA--LAYALRI---REGASEDDISSLPMYRFSQSNVMVMVDDNKKQHV 222
Query: 249 -LEAGNSAPAN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
+ G+ P++ +D ECCICL Y + E+ +LPC+H FH C+ +WLR +
Sbjct: 223 KAKIGSYNPSHISELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHCACISRWLRTKAT 282
Query: 300 CPLCKQELER 309
CPLCK + R
Sbjct: 283 CPLCKYNIRR 292
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 47/261 (18%)
Query: 90 PMRIWIVGYDIGCLLSLLLLYGRY------RQLYASQVDGFSLP---------DVEQQRS 134
P+R WIVGY + C+L ++ + Y ++ S+ DG D Q +
Sbjct: 2 PLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVT 61
Query: 135 ----SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAW 190
++S S + ++ +F IW+++G WV + +P L+ LCI L +
Sbjct: 62 LASLGDESSTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGF 121
Query: 191 NALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV- 245
+ + ++ + +CCC+P I ++L Y + A +GAS + I +L +++++V
Sbjct: 122 DVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASKEDIDQLSRFKFRKVG 177
Query: 246 -----DSNL---------EAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
D ++ E G AP + ED ECCICL+ Y + E+R+LPC H FH
Sbjct: 178 DIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFH 237
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
CVD+WL I + CPLCK +
Sbjct: 238 CTCVDKWLYINATCPLCKYNI 258
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 161/371 (43%), Gaps = 87/371 (23%)
Query: 16 STTVPYSSSPPATEDRMARNRPAAR----AGA------PSFLIR-TAMRI--SRASTW-- 60
+ +V S+P R R AAR AG+ PS L+R TA R S W
Sbjct: 45 TISVDEESNPIHRSARRQGLREAARFLRHAGSRRMVREPSMLVRETAAEQLEERQSDWAY 104
Query: 61 ----MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 116
+ L++L L ++I L +S+ E P P+R+W+VGY I C L + + YR+
Sbjct: 105 SKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRR 164
Query: 117 YASQV-----DGFSLPDVEQQRSSEDSRFSHLMNKCRTS-----LE----LFFAIWFVMG 162
+ DG P + + L ++ TS LE +F IW+++G
Sbjct: 165 RRRRHRSSSEDGGG-PGFTNSSQQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIG 223
Query: 163 NVWVFDSRFGSFQRAPNLHVLCISLLA----WNALSYSFPFLLFLLLCCCVPLISSVLGY 218
WV +P L+ LCI L + + ++ L +CCC+P I ++L Y
Sbjct: 224 FYWVSAGGQTLSGDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-Y 282
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSN-----------LEAGNSAPAN-----EDP- 261
+ A +GAS + I ++P +R+ ++ ++ E G +P ED
Sbjct: 283 AV---ADQEGASKNDIDQMPKFRFTKIGNDEKLSGKARGIMTECGTDSPIERSLSPEDAV 339
Query: 262 ----------------------------ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
ECCICL +Y++ E+R+LPC+H FH C+D+W
Sbjct: 340 HSHFHILMQLYIFKVCRLINSWLLMILKECCICLCEYEDGVELRELPCNHHFHCACIDKW 399
Query: 294 LRILSCCPLCK 304
L I S CPLCK
Sbjct: 400 LHINSRCPLCK 410
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 84 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 143
+E P P+R+W+ GY C+L + +Y +R D FS + E
Sbjct: 93 RERPATPLRLWLCGYAFECVLHMAFVYFEFRTRIR---DSFSHTTYSIVKKLEP------ 143
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 199
MN +S +W+V G W+ + +P+L+ L + LA++ F
Sbjct: 144 MNTLASS------VWWVFGFYWIVVGGQALLEDSPHLYWLTVVFLAFDVFFIIFCIGMAC 197
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------RVDSN----- 248
++F L C +P+I+ L Y M + +GAS++ I LP +R+ VD N
Sbjct: 198 IVFFALFCIIPIIA--LAYAMRI---REGASEEDIRSLPMYRFSLSNSLVMVDDNKKQLV 252
Query: 249 ---LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
+++ N + +E D ECCICL Y E EE+ +LPC+H FH C+ +WLR +
Sbjct: 253 KVRVDSCNGSHMSELSLHPDDSECCICLCPYVEGEELYRLPCTHHFHCGCISRWLRTKAT 312
Query: 300 CPLCKQELER 309
CPLCK + R
Sbjct: 313 CPLCKFNILR 322
>gi|194699464|gb|ACF83816.1| unknown [Zea mays]
gi|414885023|tpg|DAA61037.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 180
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 22/149 (14%)
Query: 180 LHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 239
++ LC++ LA + + Y+ PF++ +CCC P + SVL ++G ++GA+ + I LP+
Sbjct: 1 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQ-NRGATQELIDALPT 59
Query: 240 WRYK--RV-----------DSNLEAGNSAPAN--------EDPECCICLAKYKEKEEVRK 278
+++K RV + E G P ED CCICL KY + +E+R+
Sbjct: 60 YKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRE 119
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 120 LPCTHFFHVQCVDKWLKINAVCPLCKTEI 148
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 157/367 (42%), Gaps = 82/367 (22%)
Query: 16 STTVPYSSSPPATEDRMARNRPAAR----AGA------PSFLIR-TAMRI--SRASTW-- 60
+ +V S+P R R AAR AG+ PS L+R TA R S W
Sbjct: 46 TISVDEESNPIHRSARRQGLREAARFLRHAGSRRMMREPSMLVRETAAEQLEERQSDWAY 105
Query: 61 ----MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY--- 113
+ L++L L ++I L +S+ E P P+R+W+VGY I C L + + Y
Sbjct: 106 SKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRR 165
Query: 114 -RQLYASQVDGFSLPDVEQQRS------SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWV 166
R+ + G L + Q+ + S+ ++ +F IW+++G WV
Sbjct: 166 RRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWV 225
Query: 167 FDSRFGSFQRAPNLHVLCISLLA----WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNM 222
+P L+ LCI L + + ++ L +CCC+P I ++L Y +
Sbjct: 226 SAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV-- 282
Query: 223 GAADKGASDDQISRLPSWRYKRVDS-----------NLEAGNSAPAN-----EDP----- 261
A +GAS + I ++P +R+ + + E G +P ED
Sbjct: 283 -ADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAVQSHF 341
Query: 262 ------------------------ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRIL 297
ECCICL +Y++ E+R+LPC+H FH C+D+WL I
Sbjct: 342 HILIKLYILKVCKIDNAWLLMILQECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHIN 401
Query: 298 SCCPLCK 304
S CPLCK
Sbjct: 402 SRCPLCK 408
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 33/245 (13%)
Query: 85 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS-HL 143
ESP P+R+W+ GY + CL +L + YR+ ++ Q ++ D F +
Sbjct: 112 ESPSVPLRVWLAGYVLQCLFHVLCVTVEYRRRREAR----GGGFGADQGAAADGDFKLSI 167
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 199
+ ++ +F IW+++G W+ AP L+ L I LA++ F
Sbjct: 168 VKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVALAC 227
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPA 257
++ + +CCC+P I ++L + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 228 VIGIAVCCCLPCIIAILYAVTDQ----EGASEEDINNLSKFKFRTMGDADKLVAGIAAPV 283
Query: 258 N------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I +
Sbjct: 284 GGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHCTCIDKWLHINAT 343
Query: 300 CPLCK 304
CPLCK
Sbjct: 344 CPLCK 348
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 59/283 (20%)
Query: 55 SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLL 108
R S W + L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++
Sbjct: 71 ERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVC 130
Query: 109 L---YGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVW 165
+ Y R R L +S + + +
Sbjct: 131 ICVEYKRRRHLASSGA----------------------VERSGGWGSGHLSSSSGSDEGD 168
Query: 166 VFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMN 221
D R R + LCI LA++ + ++ + +CCC+P I ++L Y +
Sbjct: 169 PIDYRVEVRNRVEDETRLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAIL-YTV- 226
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAPA-----NEDP 261
A +GA+ ++I RLP ++++R+ + E P ED
Sbjct: 227 --ADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDA 284
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
ECCICL+ Y+++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 285 ECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCK 327
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 33/245 (13%)
Query: 85 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS-HL 143
ESP P+R+W+ GY + CL +L + YR+ ++ Q ++ D F +
Sbjct: 112 ESPSVPLRVWLSGYVLQCLFHVLCVTVEYRRRREAR----GGGFGADQGAAADGDFKLSI 167
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 199
+ ++ +F IW+++G W+ AP L+ L I LA++ F
Sbjct: 168 VKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVALAC 227
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPA 257
++ + +CCC+P I ++L + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 228 VIGIAVCCCLPCIIAILYAVTDQ----EGASEEDINNLSKFKFRTMGDADKLVAGIAAPV 283
Query: 258 N------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I +
Sbjct: 284 GGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHCTCIDKWLHINAT 343
Query: 300 CPLCK 304
CPLCK
Sbjct: 344 CPLCK 348
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 44/273 (16%)
Query: 61 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 120
+ L+++ L + + L + +E P P+R+W+ GY C+L + +Y +R
Sbjct: 68 LVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFECVLHMAFVYFEFR---TGI 124
Query: 121 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 180
D FS + E MN +S +W++ G W+ + +P L
Sbjct: 125 RDSFSHTAYSIVKKLEP------MNTLASS------VWWIFGFYWIVVGDQALLEDSPRL 172
Query: 181 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 236
+ L + LA++ F ++F L C +P+I+ L Y M + +GAS++ I
Sbjct: 173 YWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIA--LAYAMRI---REGASEEDILS 227
Query: 237 LPSWRYKR------VDSN---LEAGNSAPAN-----------EDPECCICLAKYKEKEEV 276
LP +R+ + VD N L G N +D ECCICL Y E E+
Sbjct: 228 LPMYRFSQSNSLVMVDDNKKQLIKGRVDSCNGSHMSALSLHPDDSECCICLCPYVEGAEL 287
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
+LPC+H FH +C+ +WL+ + CPLCK + R
Sbjct: 288 YRLPCTHHFHCECIGRWLQTKATCPLCKFNILR 320
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 40/262 (15%)
Query: 82 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-----------RQLYASQVDGFSLPDVE 130
+ +E P P+R+WI GY + C + ++L++ Y Q Q + D E
Sbjct: 5 TARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSE 64
Query: 131 QQ--RSSEDSRF--SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCIS 186
+ SS F S + +C + + +W+++G WV Q AP L+ L +
Sbjct: 65 DEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVV 124
Query: 187 LLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY 242
LA++ F +L L LCCC+P I ++L Y + A +GAS+ +S LP +R+
Sbjct: 125 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSMLPRYRF 180
Query: 243 KRVD---SNLEAGNSAPAN--------------EDPECCICLAKYKEKEEVRKLPCSHMF 285
+ + S + AG P ED ECCICL Y++ ++ LPC+ F
Sbjct: 181 EANNEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICLHSYEDGTKLPALPCNPHF 240
Query: 286 HLKCVDQWLRILSCCPLCKQEL 307
C+ +WL+ + CPLCK ++
Sbjct: 241 PSTCISKWLKKKATCPLCKYKI 262
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 54/300 (18%)
Query: 44 PSFLIRTAMRIS---RASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R + R S W + L+L+ L + + L +S+KE +RIW
Sbjct: 4 PSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVLLSLAVLVLSRKEKNCTELRIW 63
Query: 95 IVGYDIGCLLSLLLLYGRY--RQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE 152
IVGY + C++ +L + Y RQ Q + S ++ S ++ FS
Sbjct: 64 IVGYALQCVVHMLCVCCEYLRRQQQQQQANANSSLSWAKRLESANTMFSF---------- 113
Query: 153 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCC 208
+W+++G W+ AP+++ LC+ LA++ + ++ + +CCC
Sbjct: 114 ----VWWIVGFYWITAGGQSLAVDAPHVYWLCVVFLAFDVFFVVFCVALACVIGIAVCCC 169
Query: 209 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEA---------------GN 253
+P I ++L Y + A +GAS++ I+ LPS +++++ S+ + G
Sbjct: 170 LPCIIAIL-YAV---ADQEGASEEDINNLPSAKFRKIYSDGKGKGDTERPLAGVMTFVGA 225
Query: 254 SAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
SA E D ECCICL+ Y++ E+R LPCSH FH C+ +WLRI + CPLCK +
Sbjct: 226 SANLTERSLFEDDAECCICLSSYEDGVELRHLPCSHHFHSTCISKWLRINATCPLCKYNI 285
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 28/199 (14%)
Query: 130 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 189
E+ + + + ++ +F IW+++G WV AP L+ LCI LA
Sbjct: 22 ERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLA 81
Query: 190 WNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV 245
++ F ++ + +CCC+P I ++L Y + + +GAS+D I ++P ++++R+
Sbjct: 82 FDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAV---SDQEGASEDDIRQIPRYKFRRM 137
Query: 246 DS---------------NLEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMF 285
D +E G + P A ED ECCICL+ Y + E+R+LPC H F
Sbjct: 138 DEPEKQSVNMTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHF 197
Query: 286 HLKCVDQWLRILSCCPLCK 304
H C+D+WL I + CPLCK
Sbjct: 198 HCVCIDKWLHINATCPLCK 216
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 28/176 (15%)
Query: 153 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCC 208
+F IW+++G W+ + AP L+ LCI LA++ F ++ + +CCC
Sbjct: 64 MFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCC 123
Query: 209 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGN 253
+P I ++L Y ++ +GAS+D I ++P ++++R D E G
Sbjct: 124 LPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQTADETGPFGGIMTECGT 179
Query: 254 SAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 180 NQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCK 235
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 27/181 (14%)
Query: 153 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCC 208
+F IW+++G WV AP L+ L I LA++ F ++ + +CCC
Sbjct: 14 MFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCIALACVIGIAVCCC 73
Query: 209 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN-------- 258
+P I +L + ++GAS+D ++ L ++++ + L AG +AP
Sbjct: 74 LPCIIGIL---YAVTDQEEGASEDDVNNLSKFKFRTMSDADKLAAGIAAPVGGVMTECGT 130
Query: 259 ----------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK +
Sbjct: 131 NPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFNIV 190
Query: 309 R 309
+
Sbjct: 191 K 191
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 28/181 (15%)
Query: 153 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCC 208
+F +W+++G WV + AP L+ LCI LA++ F ++ + +CCC
Sbjct: 19 MFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCC 78
Query: 209 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGN 253
+P I ++L Y + + +GAS+D I ++P +++++++ +E G
Sbjct: 79 LPCIIAIL-YAV---SDQEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSGGIMIECGT 134
Query: 254 SAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK +
Sbjct: 135 NQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVR 194
Query: 309 R 309
+
Sbjct: 195 K 195
>gi|323454158|gb|EGB10028.1| hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]
Length = 360
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 92 RIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSL 151
R+W G+ G L+ + R +A + P + R+S R+ ++ R SL
Sbjct: 112 RVW--GFFHGLRLAATTVVAGLRWRFAPR------PPPDADRASR-RRYLVMVTNARNSL 162
Query: 152 ELFFAIWFVMGNVWVFDSRFGSFQRAPN--LHVLCISLLAWN----ALSYSFPFLLFLLL 205
+ IWFV+GN+W+ S A ++V + +L L F + +
Sbjct: 163 DALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLVVQYGQICLPCIFAIAMVPVF 222
Query: 206 CCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCI 265
C C+P + +L +++ A +GA+ ++RLP+ Y N+E EDP C +
Sbjct: 223 CFCLPCVIRLLA-SLHDPVAGRGATKRDLARLPTVPYSE---NMELLK----GEDPCCSV 274
Query: 266 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C++ Y++ +++R LPC H+FH+ CVDQWL + + CPLC++ +
Sbjct: 275 CISDYEKGDKLRVLPCKHLFHVDCVDQWLSVNATCPLCRKSI 316
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 26/175 (14%)
Query: 157 IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLI 212
+W+++G WV Q AP L+ L + LA++ F + + LCCC+P +
Sbjct: 5 LWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCV 64
Query: 213 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG-----------NSAPA---- 257
++L Y + A +GASD I LP +RY + + G NS +
Sbjct: 65 IAIL-YAL---AGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSER 120
Query: 258 ---NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
+ED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK + +
Sbjct: 121 ILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILK 175
>gi|452822917|gb|EME29932.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 368
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 151 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 210
L F+ +WF++G++W+ + + + AP+L+ L ++L+ P F L+ CC+P
Sbjct: 212 LNAFYLVWFIVGSIWLSECETCN-KTAPHLYRLVLALIVIYYALLGLPLACFCLIMCCLP 270
Query: 211 L-ISSVLGY-NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLA 268
L I +L Y + A+ +QI+ LP Y S ED C ICL
Sbjct: 271 LFIRLLLPYAESTQRRRGRAATAEQINNLPCSSY--------VHGSFEREEDTSCVICLT 322
Query: 269 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
Y + + +R LPC H +H KC+D+WL + CPLCK++++
Sbjct: 323 DYIDGDMIRHLPCKHHYHKKCIDEWLALDKSCPLCKKDID 362
>gi|194693834|gb|ACF81001.1| unknown [Zea mays]
Length = 156
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 197 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------------- 243
PF+L L+CCC+P I S++G+ ++ ++GA+ D I+ L ++R++
Sbjct: 1 MPFILCALICCCLPCIISLMGFREDLDE-NRGATSDAINALGTYRFRSKKPRNGEANEGG 59
Query: 244 -RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
V + A + ED CCICLA+Y + +++R LPC H FH CVD+WL+I + CPL
Sbjct: 60 GGVFAPGTDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPL 119
Query: 303 CKQELE 308
CK E++
Sbjct: 120 CKAEID 125
>gi|297800734|ref|XP_002868251.1| hypothetical protein ARALYDRAFT_915357 [Arabidopsis lyrata subsp.
lyrata]
gi|297314087|gb|EFH44510.1| hypothetical protein ARALYDRAFT_915357 [Arabidopsis lyrata subsp.
lyrata]
Length = 79
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 12/90 (13%)
Query: 220 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
MNM ++D+ SD+Q+S L SW++KR+ N +S AN++ KEEVRKL
Sbjct: 1 MNMRSSDRATSDNQMSSLCSWKFKRIKENATDSDSDSANDN------------KEEVRKL 48
Query: 280 PCSHMFHLKCVDQWLRILSCCPLCKQELER 309
P SH FH CVDQWL I+SCCPLCKQ+L R
Sbjct: 49 PRSHKFHFNCVDQWLHIISCCPLCKQDLLR 78
>gi|297597455|ref|NP_001043999.2| Os01g0703300 [Oryza sativa Japonica Group]
gi|255673600|dbj|BAF05913.2| Os01g0703300, partial [Oryza sativa Japonica Group]
Length = 64
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 45/46 (97%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ECCICLA+YKEKEEVR+LPC+HMFHLKCVD+WLRI+S CPLCKQEL
Sbjct: 18 ECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 63
>gi|449017510|dbj|BAM80912.1| ring finger protein [Cyanidioschyzon merolae strain 10D]
Length = 365
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 151 LELFFAIWFVMGNVWVFDSRF--GSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCC 208
L + W ++G++W+ +SR G+ AP L +C+ L+ P +L L+ CC
Sbjct: 183 LHALYLGWIILGSIWLSESRTCPGT---APLLFRICVILVLVYFAFLMLPLVLITLIICC 239
Query: 209 VPL-ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 267
+PL I ++ Y + ++ A+ + + +LP ++ D++ + P C ICL
Sbjct: 240 LPLFIRFLVNYAERLRRQERAAAPEIVEQLPVVQF---DASQCEDFGFEEDGAPICTICL 296
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRIL-SCCPLCKQELE 308
++Y+ EE+RKLPC H FH CVDQWL CP C+ +++
Sbjct: 297 SQYEPAEEIRKLPCGHHFHRACVDQWLLFFDKSCPQCRSDVD 338
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 30/174 (17%)
Query: 159 FVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISS 214
+++G WV +P L+ LCI L ++ + ++ + +CCC+P I +
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 215 VLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL----------------EAGNSAP-- 256
+L Y + +GAS + I +L ++++R D ++ E G +P
Sbjct: 61 IL-YAVT---DQEGASKEDIDQLAKFKFRR-DGDIDKLTGDDQGCSGGIMTECGTDSPME 115
Query: 257 ---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ ED ECCICL+ Y++ E+R+LPC H FH CVD+WL I + CPLCK ++
Sbjct: 116 HVLSGEDAECCICLSAYEDGAELRQLPCGHHFHCTCVDKWLYINATCPLCKYDI 169
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 56/287 (19%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R + W + L+LL + I++ L +S+ E+ P+R W
Sbjct: 57 PSMLVREAAAEHLEERQADWAYSRPVVALDLLWNISFITVAAVVLVLSRNENSPMPLRTW 116
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP-----------------DVEQQRSSED 137
+ GY + C++ ++ + YR + SQ G +P E Q D
Sbjct: 117 VAGYALQCIVHMVCVAVEYR-MRRSQRGGGPVPADEERGSDVSSSSSDEDASENQLRGRD 175
Query: 138 SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 197
+ + L ++ +F IW+++G W+ + AP L+ LCI LA++ F
Sbjct: 176 TDYVSLAKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVF 235
Query: 198 PF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN----- 248
++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++RVD
Sbjct: 236 CVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRRVDEPEKDSA 291
Query: 249 ----------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLP 280
E G + P A ED ECCIC++ E + +++P
Sbjct: 292 DATESSGGIMTECGTNQPIEKALAAEDAECCICISA-AEARKYKRIP 337
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 26/153 (16%)
Query: 177 APNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 232
AP L+ L + LA++ F + + LCCC+P + ++L Y + A +GASD
Sbjct: 2 APRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAIL-YAL---AGQEGASDA 57
Query: 233 QISRLPSWRYKRVDSNLEAG-----------NSAPA-------NEDPECCICLAKYKEKE 274
I LP +RY + + G NS + +ED ECCICL+ Y++
Sbjct: 58 DIGFLPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAECCICLSSYEDGA 117
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 118 ELSALPCNHHFHWTCITKWLRMHATCPLCKYNI 150
>gi|281210989|gb|EFA85155.1| hypothetical protein PPL_02155 [Polysphondylium pallidum PN500]
Length = 548
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 22/163 (13%)
Query: 155 FAIWFVMGNVWVFDSRFGSF--QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLI 212
+ IWF++G + F ++ AP L + S++ + S F+ CC +
Sbjct: 324 YVIWFIVGVILTFKAKSSDQCPSSAPYLFWVIYSVVIIQIIICSLGFIF-----CCCSCV 378
Query: 213 SSVLGYNMNMGAADK------GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCIC 266
S+L +N A D+ GA+D I +L +YK A +D C IC
Sbjct: 379 FSLLRLGLNFEATDRAASVSRGATDSMIRKLSIKKYKV---------GLLAKDDTSCAIC 429
Query: 267 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
L++Y E +++R LPC+H +HL C+D+WL I CP CK+++++
Sbjct: 430 LSEYIEDDKIRILPCNHHYHLDCIDRWLIIDKSCPFCKRDIDK 472
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 22/126 (17%)
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG------- 252
+ + LCCC+P + ++L Y + A +GASD I LP +RY + + G
Sbjct: 4 FIGIALCCCLPCVIAIL-YAL---AGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMI 59
Query: 253 ----NSAPA-------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 301
NS + +ED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CP
Sbjct: 60 PVLNNSGTSTSERILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCP 119
Query: 302 LCKQEL 307
LCK +
Sbjct: 120 LCKYNI 125
>gi|452824772|gb|EME31773.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 351
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 90 PMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ-VDGFSLPDVEQQRSSEDSRFSHLMNKCR 148
P++ W++ + + LLY +++L VD +S QQRS C
Sbjct: 140 PLKYWVLFNGV-----ISLLYTIFKRLSNEDLVDDYSQLTSIQQRSL----------ICF 184
Query: 149 TSLELFFAIWFVMGNVWVFDSRFGSFQR-APNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
+ WF++G VWVF R + QR A L+ L ++L+ N + F + LL CC
Sbjct: 185 RIISWLSLAWFIVGMVWVF--RCETCQRTAVALYRLSLALVIINLI---FLGVSVLLACC 239
Query: 208 CVPLISSVLGYNMNMGAA----DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPEC 263
L ++ + N+ + +GA+ +I R+ RY R S E+ C
Sbjct: 240 IFVLAPNLFRPDFNLDGSVTFHRRGATKKEIDRILLVRYHRDSSE----------EESTC 289
Query: 264 CICLAKYKEKEEVRKLPCS--HMFHLKCVDQWLRILSCCPLCKQELE 308
ICL +Y+E +R LPC+ H FH CVD+WL + CPLCK E++
Sbjct: 290 PICLCEYEEGNLLRILPCTSKHRFHATCVDRWLILNKSCPLCKAEID 336
>gi|260818404|ref|XP_002604373.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
gi|229289699|gb|EEN60384.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
Length = 446
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 284
A +G + D+I++LPS ++ R D+ A + NE+ C IC+ +YK ++R++PC+H
Sbjct: 353 APRGLTKDEIAQLPSRKFTRQDAQRLA---SEGNEN-SCTICMVEYKTGNKLRRMPCAHE 408
Query: 285 FHLKCVDQWLRILSCCPLCKQELE 308
FH KCVD+WL+ CP+C+Q++E
Sbjct: 409 FHSKCVDRWLKQNGSCPVCRQQVE 432
>gi|328868397|gb|EGG16775.1| transmembrane protein [Dictyostelium fasciculatum]
Length = 826
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 128 DVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF--QRAPNLHVLCI 185
D Q S E +R + L + WF++G V F +R AP L +
Sbjct: 310 DDNGQPSPEVARVQLIFRNLHNVLSCSWITWFIVGIVCTFKARAHDTCTSSAPYLFWVSY 369
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPLISSV-LGYNMNM------------GAADKGASDD 232
S++ + + S L +L CCC + S + LG ++ M +GA+D
Sbjct: 370 SVVIFQIVIAS----LAMLFCCCSCIFSLMRLGVHIEMVQAAGGGGAAGGMGDSRGATDT 425
Query: 233 QISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
+ +L + ++K N+D C ICL Y + E++R LPC H +HL C+D+
Sbjct: 426 MLRKLSTKKFK---------TGVLPNDDCSCAICLTDYVDGEKIRILPCKHHYHLNCIDR 476
Query: 293 WLRILSCCPLCKQELE 308
WL CP CK++++
Sbjct: 477 WLIQNKSCPFCKRDID 492
>gi|422294477|gb|EKU21777.1| ring u-box domain-containing protein, partial [Nannochloropsis
gaditana CCMP526]
Length = 326
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 141 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFL 200
S L+ K R L++F IWF +GN WVF SR+ F +P + + + ++ ++ FP L
Sbjct: 183 SVLVEKAREILDIFALIWFTLGNAWVFGSRYCRFT-SPGIFYVSLGIIVMTYVTMLFPVL 241
Query: 201 LFLLL----CCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSA 255
L LL C C+P + A +GAS +I+ LP ++ + EAG
Sbjct: 242 LALLFVPFACFCMPCFLRLAIQLQAQDRASRGASSAEINALPVVKFGVGMFDGAEAGT-- 299
Query: 256 PANEDPECCICLAKYKEKEEVRKLPC--SHMFHL 287
C ICLA+Y+E E +R L C H FH+
Sbjct: 300 -------CAICLAEYEEGEALRLLQCPGKHHFHV 326
>gi|224086263|ref|XP_002335211.1| predicted protein [Populus trichocarpa]
gi|222833086|gb|EEE71563.1| predicted protein [Populus trichocarpa]
Length = 66
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 5/66 (7%)
Query: 220 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP-----ANEDPECCICLAKYKEKE 274
M+MG+ ++GASDDQISRLPS RYK VD++ E NS A+ D ECCICLAK K+ E
Sbjct: 1 MSMGSTERGASDDQISRLPSRRYKAVDTDSEFRNSVDCDSTVASADLECCICLAKNKDIE 60
Query: 275 EVRKLP 280
EVR+LP
Sbjct: 61 EVRQLP 66
>gi|390340259|ref|XP_799787.3| PREDICTED: uncharacterized protein LOC575286 [Strongylocentrotus
purpuratus]
Length = 1687
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 13/111 (11%)
Query: 210 PLISSVLGYNMNMGAADKGASDDQISR--LPSWRYK-----RVDSNLEAGNSAPANEDPE 262
P+ ++ ++G ++GAS I R LP +YK DS+ E G A + P+
Sbjct: 1410 PMYEELVQLGEHLGQVNRGASRSTIERNTLPH-KYKLRHQKESDSSEETGEVEGAAKIPD 1468
Query: 263 -----CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
C ICL+ +++ E+VR+LPC H+FH++CVDQWL CP+C+ ++E
Sbjct: 1469 DDMEKCTICLSYFEDDEDVRRLPCMHLFHVECVDQWLVTNKRCPICRVDIE 1519
>gi|298711234|emb|CBJ32454.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 123
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 199 FLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 258
LL +LC C+P + ++G + KGA D+I +LP +Y+ V
Sbjct: 1 MLLVPVLCFCLPCVIRLMGM-LQGPQRRKGARQDEIEKLPVVKYREVQDM---------- 49
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
ED C ICL +Y+ ++E+RKLPC H FH CVD WL + + CP C+
Sbjct: 50 EDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCR 95
>gi|388514763|gb|AFK45443.1| unknown [Lotus japonicus]
Length = 145
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ ED CCICLA Y+ +E+R+LPCSH FH CVD+WL+I + CPLCK E+
Sbjct: 79 SKEDAVCCICLATYENNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEI 129
>gi|429965613|gb|ELA47610.1| hypothetical protein VCUG_00933 [Vavraia culicis 'floridensis']
Length = 241
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 70 VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDV 129
+Q+ T L ++ + P +++I Y++ L+ L+L + R+R+ + LPD+
Sbjct: 39 LQVIFNTSVLVVTMNQHSKAPFKLFISVYNVLVLVQLILFFLRHREYFRVA----RLPDI 94
Query: 130 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 189
Q ++E S FS+ ++ F W + G W + + AP L+ + L
Sbjct: 95 --QDNNELSLFSNFVDA-------FSLFWCLTGFHWTQECKTCKIS-APLLYY---TTLT 141
Query: 190 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL 249
W+ L + PLI+ VL + + A K LP YK
Sbjct: 142 WSYLG---------IFVVVSPLIAIVLL--IFIIAYFK-------PNLPVIEYK------ 177
Query: 250 EAGNSAPAN-EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
N+ N E+ C ICLA+Y ++++ LPC+H FHL C+D+W I CPLCK+ +
Sbjct: 178 ---NTGEINKENANCSICLAEYNVNDKIKILPCNHHFHLNCIDEWFNIDDICPLCKKPIN 234
>gi|330804127|ref|XP_003290050.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
gi|325079850|gb|EGC33431.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
Length = 102
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 285
+KGA++ +I +LP + + + N NE CCICL + + EEVR LPC H F
Sbjct: 22 NKGATNTEIIKLPVHKIDKNQATNPENNGPTTNE--TCCICLCEMENGEEVRTLPCKHFF 79
Query: 286 HLKCVDQWLRILSCCPLCKQEL 307
H+ C+DQWL++ CP+ K+ +
Sbjct: 80 HVTCIDQWLKVNKVCPVDKKAI 101
>gi|242018674|ref|XP_002429799.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514811|gb|EEB17061.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 125
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
++GAS D I R P +YKR+ N+E + C ICL++++E E+VR+LPC H
Sbjct: 35 NRGASQDTIERNTFPH-KYKRMKKNVEDSEEDHVEK---CTICLSEFEELEDVRRLPCMH 90
Query: 284 MFHLKCVDQWLRILSCCPLCKQELE 308
+FH++CVDQWL CP+C+ ++E
Sbjct: 91 LFHIECVDQWLSTNKRCPICRVDIE 115
>gi|387593481|gb|EIJ88505.1| hypothetical protein NEQG_01195 [Nematocida parisii ERTm3]
Length = 259
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED +C ICLA Y EKE++RKLPC H FH+ C+D+W I CPLCK+ +
Sbjct: 200 EDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPI 248
>gi|387597135|gb|EIJ94755.1| hypothetical protein NEPG_00279, partial [Nematocida parisii ERTm1]
Length = 263
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 258 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED +C ICLA Y EKE++RKLPC H FH+ C+D+W I CPLCK+ +
Sbjct: 203 EEDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPI 252
>gi|378755066|gb|EHY65093.1| hypothetical protein NERG_01539 [Nematocida sp. 1 ERTm2]
Length = 263
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 258 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED +C ICLA Y EKE++RKLPC H FH+ C+D+W I CPLCK+ +
Sbjct: 203 EEDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPI 252
>gi|452823709|gb|EME30717.1| hypothetical protein Gasu_19590 [Galdieria sulphuraria]
Length = 286
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 15/93 (16%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAG--------NSAPA-----NEDP--ECCICLAKYK 271
+GASDD I R+PS+ + + D NL +S P+ NED C ICL Y
Sbjct: 190 QGASDDLIERIPSYIFVQPDQNLAKNELQENTRQSSVPSFAPKENEDTAMSCSICLEAYV 249
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ E++R LPC H FH CVD+WLR + CP+CK
Sbjct: 250 DGEQLRVLPCMHQFHSLCVDKWLRRYARCPICK 282
>gi|414885021|tpg|DAA61035.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 80
Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 4 CCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 48
>gi|348690933|gb|EGZ30747.1| hypothetical protein PHYSODRAFT_295425 [Phytophthora sojae]
Length = 548
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 129 VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFV--MGNVWVFDSRFGSFQRAPNLHVLCIS 186
+E +S R++H R + + +G+VWV+++ N +
Sbjct: 334 IESDEASPPLRYNHRAALWREDTMVIHGGSYQSQLGDVWVYNTTNAETTEISN------N 387
Query: 187 LLAWNALSYSFPFLLFLLLCCCVPLISSVLGY--------NMNMGAADKGASDDQISRLP 238
L + S + F++ C ++ + G+ M A +G + +++ +L
Sbjct: 388 TLPLDPESLVYVLGAFIVTCWSCLALTVITGFLYDQVRAAQMRGAAVVRGVTKERLEQLR 447
Query: 239 SWRYKRVDSNLEA-------GNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
+Y R + N +A D C ICL ++++ E+VR LPC H+FH+ C+D
Sbjct: 448 VTKYCRAERNPQAPTEPLNPAEGGSTENDDVCPICLIEFEDGEDVRNLPCKHIFHVACID 507
Query: 292 QWLRILSCCPLCKQELE 308
+WL+ + CP+CK ++
Sbjct: 508 EWLKRNTSCPMCKSNVD 524
>gi|357509173|ref|XP_003624875.1| RING finger protein [Medicago truncatula]
gi|355499890|gb|AES81093.1| RING finger protein [Medicago truncatula]
Length = 400
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 20/103 (19%)
Query: 227 KGASDDQISRLPSWRYKR------VDSN--------LEAGNSAPANE------DPECCIC 266
+GAS+D I LP +R+ + VD N + + N + +E D ECCIC
Sbjct: 293 EGASEDDIKSLPMYRFSQPNVMIMVDKNKKQLDEARIGSHNQSHISELSLHPDDSECCIC 352
Query: 267 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
L Y + E+ +LPC+H FH +C+ +WLR + CPLCK + R
Sbjct: 353 LCSYVDGTELYRLPCTHHFHCECISRWLRTKATCPLCKFNIRR 395
>gi|413941893|gb|AFW74542.1| hypothetical protein ZEAMMB73_593005 [Zea mays]
Length = 193
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 141 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWN 191
S+LMNK R LELFFA+WFVMGNVWVFD+R GSFQRAP L + S+ +
Sbjct: 42 SYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAPRLDGIYFSIFPFG 92
>gi|147815563|emb|CAN70534.1| hypothetical protein VITISV_010222 [Vitis vinifera]
Length = 244
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 9/85 (10%)
Query: 231 DDQISRLPSWRYKRVDSN----LEAG----NSAPANEDPECCICLAKYKEKEEVRKLPC- 281
D + LP++++K ++ L AG +++ + ED CCICL Y + EE+R+LPC
Sbjct: 151 DSPPNVLPTYKFKSKENGGGVLLAAGTKKKSASLSGEDVVCCICLGNYADNEELRELPCC 210
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQE 306
SH FH++CVD+WL+I + CPLC+ E
Sbjct: 211 SHFFHVECVDKWLKIKARCPLCQSE 235
>gi|440494400|gb|ELQ76781.1| putative E3 ubiquitin ligase [Trachipleistophora hominis]
Length = 241
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 45/240 (18%)
Query: 70 VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDV 129
+Q+ T L ++ + P +++I Y++ L+ ++L + R+R+ + LPD+
Sbjct: 39 LQVIYNTIILVVTMNQHTKAPFKLFISVYNVLVLVQIILFFLRHREYFRVT----RLPDI 94
Query: 130 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 189
Q ++E S FS+ ++ + LF W + G W + + AP L+ + A
Sbjct: 95 --QDNNELSLFSNFVD----AFSLF---WCLTGFHWTQECKTCKIT-APWLYY---TTYA 141
Query: 190 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL 249
W+ L +F+++ PLI+ VL + + A K LP YK
Sbjct: 142 WSFLG------IFVVIS---PLIAIVLL--IFIIAYFK-------PNLPVIEYK------ 177
Query: 250 EAGNSAPAN-EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
N+ N E+ C ICLA+Y ++++ LPC+H FHL C+D+W I CPLCK+ +
Sbjct: 178 ---NAGEINKENANCSICLAEYNMNDKIKILPCNHHFHLNCIDEWFNIDDICPLCKKPIN 234
>gi|357466367|ref|XP_003603468.1| RING finger protein [Medicago truncatula]
gi|355492516|gb|AES73719.1| RING finger protein [Medicago truncatula]
Length = 81
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
CCIC+A Y+ +E+R+LPCSH+FH +CVD+WL+I + CPLCK E+
Sbjct: 6 CCICIANYENDDELRELPCSHLFHKECVDKWLKINALCPLCKSEI 50
>gi|242063536|ref|XP_002453057.1| hypothetical protein SORBIDRAFT_04g037520 [Sorghum bicolor]
gi|241932888|gb|EES06033.1| hypothetical protein SORBIDRAFT_04g037520 [Sorghum bicolor]
Length = 318
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 223 GAADKGASDDQISRLPSWRYKRVDSNL-EAGNSAPANEDPECCICLAKYKEKEEVRKLP- 280
GA +G D I LP++ Y++ +N E+ ++APA+E C +CL +++E + VR LP
Sbjct: 133 GAEPRGLEDAAIRALPAFSYRKTPANAAESQSAAPASE---CAVCLGEFEEGDRVRMLPA 189
Query: 281 CSHMFHLKCVDQWLRILSCCPLCK 304
C H+FHL CVD WL+ + CPLC+
Sbjct: 190 CLHVFHLGCVDAWLQSNASCPLCR 213
>gi|325179882|emb|CCA14284.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 320
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 139 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 198
R + L+ R +L L W +MGNVW+F S + A +L S F
Sbjct: 134 RHAKLLKTIRFTLSLLELYWALMGNVWIFFSAGSTELDAHRCGDGSTTLH-----SVGFW 188
Query: 199 FLLFLLLCCCVPLISSVLGYNM-NMGAADKGASDDQIS--RLPSWRYKRVDSNLEAGNSA 255
L+ +C P + ++ Y + + D +Q++ +L + + + L
Sbjct: 189 LLIVPYVCELTPFLYCLVSYGIVQLTGWDLDEYVEQLTSAKLERGAKREIINQLTLRIFV 248
Query: 256 PANE--DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
P N D CCICL ++ E++R LPC+H FH C+D+WL + + CP C+ ++
Sbjct: 249 PTNSTYDTSCCICLCDFELNEKIRLLPCNHHFHSGCIDEWLGLNATCPTCRISIDE 304
>gi|325182411|emb|CCA16864.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 342
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 34/191 (17%)
Query: 138 SRFSHLMNKCRTSLELFFAIWFVMGNVWVF---DSRFGSFQRAPNLHVLCISLLAWNALS 194
++ + + L+L WF++GN+WV D++ G + + L +
Sbjct: 134 EQYMRYLGNVKYGLDLLGVFWFLVGNMWVISDDDAQHGKPATGSGEKLEDAAPLTPSHCD 193
Query: 195 YSFPFLLFLLLCC---------------------CVPLISSVLGYNMNMGAADKGASDDQ 233
S L F ++ C+P + VL KGAS +
Sbjct: 194 PSLYHLAFWMIVITYVKIFLPCILLLILLPVICFCLPCLIRVLS-RFQDPMRGKGASQEI 252
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
I+RL YK+ A +D CCICL Y E EE+R LPC H FH +C D+W
Sbjct: 253 IARLTCTNYKK---------DMFAQDDCNCCICLNAYVEDEELRLLPCRHHFHKQCADEW 303
Query: 294 LRILSCCPLCK 304
L + + CP C+
Sbjct: 304 LVVNATCPTCR 314
>gi|357509175|ref|XP_003624876.1| RING finger protein [Medicago truncatula]
gi|355499891|gb|AES81094.1| RING finger protein [Medicago truncatula]
Length = 296
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 24/148 (16%)
Query: 179 NLHVLCISLLAWNALSYSF--PFLLFLLLCCCVPLISSVLGYNMNMGA-ADKGASDDQIS 235
L ++C+SL + +SF ++F L C V +I+ L Y + +GAS+D I
Sbjct: 141 GLTMVCLSLNEFFDAVFSFWIYLIVFGALFCIVQIIA--LAYALTQPLRIREGASEDDIK 198
Query: 236 RLPSWRYKR------VDSN---LEAGNSAPAN----------EDPECCICLAKYKEKEEV 276
LP +R+ + VD N LEA + +D ECCICL Y + E+
Sbjct: 199 SLPMYRFCQPNVMIMVDKNKTQLEARTGSHNRSHISELSLHPDDSECCICLCPYVDGTEL 258
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+LPC+H FH +C+ +WLR + CPLCK
Sbjct: 259 YRLPCTHHFHCECIGRWLRTKATCPLCK 286
>gi|432852760|ref|XP_004067371.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Oryzias latipes]
Length = 1034
Score = 73.9 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 169 SRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL--LLCCCVPLISSVLGYNMNMGAAD 226
S + P LH IS++ ++P + ++ + +L +G +
Sbjct: 883 SHLPHYHAPPRLHHFPISVMHAGISDMTYPHIRYISSRMTGFGRTYEDLLHLEERLGTVN 942
Query: 227 KGASDDQISRLP-SWRYKRVDSNLEAGNSAPANEDPE--CCICLAKYKEKEEVRKLPCSH 283
+GAS I R +YK+ + + A+ED E C ICL+ +E E+VR+LPC H
Sbjct: 943 RGASQGTIERCTYPHKYKKRKLHGKQDEDQGADEDTEEKCTICLSILEEGEDVRRLPCMH 1002
Query: 284 MFHLKCVDQWLRILSCCPLCKQELE 308
+FH CVDQWL CP+C+ ++E
Sbjct: 1003 LFHQLCVDQWLLTNKKCPICRVDIE 1027
>gi|348669639|gb|EGZ09461.1| hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae]
Length = 321
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 83 KKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSH 142
+ E+ + +++W++ + + L+LLL + Y A L + +
Sbjct: 92 QSETLCYRIQVWVLLHTVHLALTLLLEWTLYYLNGARSNSAIRLRE----------HYMA 141
Query: 143 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 202
+++ + L+L WF++GN+WV S ++ L + ++ +SY+ FL
Sbjct: 142 PLSQLKYGLDLAGLFWFLVGNMWVI-SDGARCDDGSAMYQLALWMIV---ISYAKIFLPC 197
Query: 203 LLLCC-------CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSA 255
LLL C+P + +L + KGA+ + I RL + Y + N
Sbjct: 198 LLLLALLPVLCFCLPCVIRLLS-RLQDPMRGKGATKEIIDRLETKTY--------SANMF 248
Query: 256 PANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
P ED CCICL Y+ + +R LPC H FH CVD+WL + S CP C++ +
Sbjct: 249 PP-EDACCCICLNDYEPSQSLRVLPCEHHFHKDCVDEWLLVNSTCPTCRKSI 299
>gi|344248155|gb|EGW04259.1| RING finger protein 165 [Cricetulus griseus]
Length = 280
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 137 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 196
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 197 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 256
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 257 QWLAMSKKCPICRVDIE 273
>gi|348528117|ref|XP_003451565.1| PREDICTED: RING finger protein 165-like [Oreochromis niloticus]
Length = 345
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRL--PSWRY 242
+Y +P L L L P +L +G+ +GA I R P
Sbjct: 213 NYPYPQLHLLALQSLNPSRHATAVRESYEELLQLEDRLGSVSRGAVQTTIERFTFPHKYK 272
Query: 243 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
KR L+ G + D +C ICL+ ++ E+VR+LPC H+FH CVDQWL CP+
Sbjct: 273 KRKPLQLKIGEEEETDVDEKCTICLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPI 332
Query: 303 CKQELE 308
C+ ++E
Sbjct: 333 CRVDIE 338
>gi|119621879|gb|EAX01474.1| ring finger protein 165, isoform CRA_a [Homo sapiens]
Length = 262
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
++ +Y +P L FL L +L +G +GA + I R +YK
Sbjct: 136 TQMVVHEIRNYPYPQLHFLAL--------QLLQLEDRLGNVTRGAVQNTIERFTFPHKYK 187
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 188 KRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 247
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 248 PICRVDIE 255
>gi|148677515|gb|EDL09462.1| mCG18269 [Mus musculus]
Length = 280
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 137 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 196
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 197 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 256
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 257 QWLAMSKKCPICRVDIE 273
>gi|149029497|gb|EDL84711.1| similar to ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 281
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 138 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 197
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 198 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 257
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 258 QWLAMSKKCPICRVDIE 274
>gi|321461482|gb|EFX72514.1| hypothetical protein DAPPUDRAFT_6903 [Daphnia pulex]
Length = 107
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRV-DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
M +GAS I R S YKR+ SN + + +C ICL +++E E+VR+L
Sbjct: 13 MAQLSRGASQTCIERNTLSHSYKRLLRSNSSVDGDSNEDNTEKCTICLCEFEEGEDVRRL 72
Query: 280 PCSHMFHLKCVDQWLRILSCCPLCKQELE 308
PC H+FH+ CVDQWL + CPLC+ ++E
Sbjct: 73 PCMHLFHVSCVDQWLTTVKFCPLCRVDIE 101
>gi|348509737|ref|XP_003442403.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Oreochromis
niloticus]
Length = 977
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANEDPE--CCICLAKYKEKEEVRK 278
+G ++GAS I R +YK+ + + A+ED E C ICL+ +E E+VR+
Sbjct: 881 LGTVNRGASQGTIERCTYPHKYKKRKLHGKQDEDEGADEDTEEKCTICLSILEEGEDVRR 940
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 LPCMHLFHQLCVDQWLLTNKKCPICRVDIE 970
>gi|256818810|ref|NP_001157976.1| RING finger protein 165 [Mus musculus]
gi|378523436|sp|E9QAU8.1|RN165_MOUSE RecName: Full=RING finger protein 165
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|345480478|ref|XP_003424157.1| PREDICTED: hypothetical protein LOC100678661 [Nasonia vitripennis]
Length = 612
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL++++E E VR+LPC H+FH+ CVDQWL SCCP+C+ ++E
Sbjct: 555 KCTICLSEFEENENVRRLPCMHLFHIDCVDQWLSTNSCCPICRVDIE 601
>gi|256818812|ref|NP_001157977.1| ring finger protein 165 [Rattus norvegicus]
gi|183985981|gb|AAI66566.1| Rnf165 protein [Rattus norvegicus]
Length = 348
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 205 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 264
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 265 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 324
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 325 QWLAMSKKCPICRVDIE 341
>gi|395822968|ref|XP_003784773.1| PREDICTED: RING finger protein 165 [Otolemur garnettii]
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|256079620|ref|XP_002576084.1| ring finger protein 11 (sid 1669) (nedd4 ww domain-binding protein
2) [Schistosoma mansoni]
gi|353230819|emb|CCD77236.1| putative ring finger protein 11 (sid 1669) (nedd4 ww domain-binding
protein 2) [Schistosoma mansoni]
Length = 468
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
S+PA PEC ICL +Y++K+ +R LPC H FH+KC+D WL+ + CP C+
Sbjct: 218 SSPARGHPECEICLIEYQDKDRLRHLPCGHAFHMKCIDSWLKQSTTCPKCR 268
>gi|395510609|ref|XP_003759566.1| PREDICTED: RING finger protein 165 [Sarcophilus harrisii]
Length = 347
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVP---------LISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G+ +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPNRHTSAVRESYEELLQLEDRLGSVSRGAVQNTIE 263
Query: 236 RLP-SWRYKRVDSNLEAGNSAPANE---DPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ G E D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQEGKGKKEDGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|354477745|ref|XP_003501079.1| PREDICTED: RING finger protein 165-like [Cricetulus griseus]
Length = 355
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 212 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 271
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 272 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 331
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 332 QWLAMSKKCPICRVDIE 348
>gi|326521562|dbj|BAK00357.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP- 280
+G+ G + +S LP Y++ EAG+++ A D C +CL++ + + VR+LP
Sbjct: 87 IGSRRHGLNASALSALPVTVYRK-----EAGSTSAAGAD--CAVCLSELVDGDTVRQLPN 139
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQELER 309
C H+FH++CVD WLR + CPLC+ E E+
Sbjct: 140 CGHVFHVECVDAWLRTRTSCPLCRAEAEQ 168
>gi|384252332|gb|EIE25808.1| hypothetical protein COCSUDRAFT_60820 [Coccomyxa subellipsoidea
C-169]
Length = 1018
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G D I LP+ +Y S+ + E+ +C +C +++ E VR LPC
Sbjct: 913 VGTVSRGVPQDIIDALPNAKYTSRFSDAHPADGK--EEEEQCAVCRMEFEAGENVRLLPC 970
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQELER 309
SH++H C+ QWL I CP+C QE+ +
Sbjct: 971 SHVYHPDCIGQWLHINKVCPICSQEVTK 998
>gi|327266890|ref|XP_003218236.1| PREDICTED: e3 ubiquitin-protein ligase RNF13-like [Anolis
carolinensis]
Length = 384
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPS 239
H++ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLQKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|294935942|ref|XP_002781567.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892404|gb|EER13362.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 365
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 130/327 (39%), Gaps = 62/327 (18%)
Query: 8 PSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELLA 67
P S SS P S P +RM+R L+R + + A+++ L +A
Sbjct: 64 PGTSPEGSSLLGPEQGSDP---NRMSRRER-------ELLVRGNLAEAVATSFTLLVTVA 113
Query: 68 LLVQISIITFTLSISKKESPIWPMRIWIV---GYDIGCLLSLLL------LYGRYRQLYA 118
L + + + L + W IWIV + C + LL+ L +R ++
Sbjct: 114 LFILVVVYAMYLYL-------WAWAIWIVLTNDRKLECDVPLLMWLEVYMLASLFRGVFQ 166
Query: 119 SQVDGFSL-----PDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 173
V+ L D + S + + L ++ L LFF W + G + S S
Sbjct: 167 RMVETLYLRLTYGQDWQLHASEHPVKLALL----KSFLNLFFPAWLIYGQTLLVTSHTCS 222
Query: 174 FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLG-----YNMNMGA--AD 226
A N + S AW F+ L C I ++ G + + G A
Sbjct: 223 ---ATNSSLYTCS--AW--------FIGVGLTIWCGFGIVALFGATFLLWMVRTGRLRAK 269
Query: 227 KGASDDQISRLPSWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEK-EEVRKLPCS 282
+GAS D I ++P+ +Y VD A S P NE C IC Y + +E++ PC
Sbjct: 270 RGASPDVIDKIPTVQYDSTLFVDDQNSADGSHPLNE---CSICFQNYSDSTDEIKHTPCD 326
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELER 309
H FH C+ WL + CPLC+ + E
Sbjct: 327 HYFHKSCLAHWLNTATTCPLCRSDFEE 353
>gi|449495146|ref|XP_004159747.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
Length = 180
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 192 ALSYSFPFLLFLLLC---CCVPLISSVLGY---NMNMGAADKGASDDQISRLPSWRYKRV 245
AL F +L LLC C V LI+ N +A++G + LP +RYK
Sbjct: 22 ALESDFVVILAALLCALICMVGLITVARCAWLRRGNQASANRGLKKKILQSLPKFRYK-- 79
Query: 246 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
S + G A EC ICLA++ E EE+R+LP C H FH+ CVD WL S CP C+
Sbjct: 80 -STVGDGKIAA-----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 133
Query: 305 QEL 307
Q L
Sbjct: 134 QIL 136
>gi|414884510|tpg|DAA60524.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 93
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 250 EAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E G + P + ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 21 ECGTNPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCK 80
>gi|294887191|ref|XP_002772001.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239875909|gb|EER03817.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 365
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 130/327 (39%), Gaps = 62/327 (18%)
Query: 8 PSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRASTWMTLELLA 67
P S SS P S P +RM+R L+R + + A+++ L +A
Sbjct: 64 PGTSPEGSSLLGPEQGSDP---NRMSRRER-------ELLVRGNLAEAVATSFTLLVTVA 113
Query: 68 LLVQISIITFTLSISKKESPIWPMRIWIV---GYDIGCLLSLLL------LYGRYRQLYA 118
L + + + L + W IWIV + C + LL+ L +R ++
Sbjct: 114 LFILVVVYAMYLYL-------WAWAIWIVLTNDRKLECDVPLLMWLEVYMLASLFRGVFQ 166
Query: 119 SQVDGFSL-----PDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 173
V+ L D + S + + L ++ L LFF W + G + S S
Sbjct: 167 RMVETLYLRLTYGQDWQLHASEHPVKLALL----KSFLNLFFPAWLIYGQTLLVTSHTCS 222
Query: 174 FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLG-----YNMNMGA--AD 226
A N + S AW F+ L C I ++ G + + G A
Sbjct: 223 ---ATNSSLYTCS--AW--------FIGVGLTIWCGFGIVALFGATFLLWMVRTGRLRAK 269
Query: 227 KGASDDQISRLPSWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEK-EEVRKLPCS 282
+GAS D I ++P+ +Y VD A S P NE C IC Y + +E++ PC
Sbjct: 270 RGASPDVIDKIPTVQYDSTLFVDDQNSADGSHPLNE---CSICFQNYSDSTDEIKHTPCD 326
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELER 309
H FH C+ WL + CPLC+ + E
Sbjct: 327 HYFHKSCLAHWLNTATTCPLCRSDFEE 353
>gi|301111063|ref|XP_002904611.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262095928|gb|EEY53980.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 320
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 144 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 203
+++ + L+L WF++GN+WV S ++ L + ++ +SY+ FL L
Sbjct: 143 LSQLKYGLDLAGLFWFLVGNMWVI-SDGARCDDGSAMYQLALWMIV---ISYAKIFLPCL 198
Query: 204 LLCC-------CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP 256
LL C+P + +L + KGA+ + I +L S Y N P
Sbjct: 199 LLLALLPILCFCLPCVIRLLS-RLQDPMRGKGATKEMIDQLESKTY--------TANMFP 249
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCICL Y+ + +R LPC+H FH +CVD+WL + S CP C++ +
Sbjct: 250 P-EDACCCICLNDYEASQSLRVLPCAHHFHKECVDEWLLVNSTCPTCRKSI 299
>gi|431896218|gb|ELK05634.1| RING finger protein 165 [Pteropus alecto]
Length = 404
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 270 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 329
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 330 KRRPQDGKGKKEDGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 389
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 390 PICRVDIE 397
>gi|74228963|dbj|BAE21950.1| unnamed protein product [Mus musculus]
Length = 154
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISR 236
++ +Y +P L FL L P +L +G +GA + I R
Sbjct: 12 QMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIER 71
Query: 237 LP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
+YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQ
Sbjct: 72 FTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQ 131
Query: 293 WLRILSCCPLCKQELE 308
WL + CP+C+ ++E
Sbjct: 132 WLAMSKKCPICRVDIE 147
>gi|449456961|ref|XP_004146217.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
Length = 181
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 192 ALSYSFPFLLFLLLC---CCVPLISSVLGY---NMNMGAADKGASDDQISRLPSWRYKRV 245
AL F +L LLC C V LI+ N +A++G + LP +RYK
Sbjct: 22 ALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASANRGLKKKILQSLPKFRYK-- 79
Query: 246 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
S + G A EC ICLA++ E EE+R+LP C H FH+ CVD WL S CP C+
Sbjct: 80 -STVGDGKIAA-----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 133
Query: 305 QEL 307
Q L
Sbjct: 134 QIL 136
>gi|387019691|gb|AFJ51963.1| e3 ubiquitin-protein ligase RNF13-like [Crotalus adamanteus]
Length = 381
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 173 SFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SD 231
F H++ I + Y PFL+ + +C + +I + + + A +
Sbjct: 161 EFTYEKGAHIVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLQK 220
Query: 232 DQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
DQ+ +LP ++K+ D E C ICL +Y++ +++R LPCSH +H KCVD
Sbjct: 221 DQLKKLPIHKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVD 268
Query: 292 QWL-RILSCCPLCKQEL 307
WL + CP+CKQ++
Sbjct: 269 PWLTKTKKTCPVCKQKV 285
>gi|328768780|gb|EGF78825.1| hypothetical protein BATDEDRAFT_89994 [Batrachochytrium
dendrobatidis JAM81]
Length = 465
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
K +S I+ P+ + +D ED C ICLA+Y ++++++PC H FH
Sbjct: 384 KASSSTDITAPPAPTFLELDE-----------EDAHCIICLAEYDSGDDLKQMPCKHHFH 432
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
CVD WLR+ S CPLC QEL+
Sbjct: 433 AICVDDWLRLKSNCPLCIQELQ 454
>gi|397520252|ref|XP_003830238.1| PREDICTED: RING finger protein 165 [Pan paniscus]
Length = 279
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 136 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 195
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 196 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 255
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 256 QWLAMSKKCPICRVDIE 272
>gi|351707128|gb|EHB10047.1| RING finger protein 165 [Heterocephalus glaber]
Length = 280
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 137 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 196
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 197 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 256
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 257 QWLAMSKKCPICRVDIE 273
>gi|354499654|ref|XP_003511923.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Cricetulus griseus]
gi|344256164|gb|EGW12268.1| RING finger protein 13 [Cricetulus griseus]
Length = 380
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|327259457|ref|XP_003214553.1| PREDICTED: RING finger protein 165-like [Anolis carolinensis]
Length = 344
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 222 MGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
+G+ ++GA + I R +YK+ S E + ++ D +C ICL+ ++ E+VR
Sbjct: 247 LGSVNRGAVQNTIERFTFPHKYKKRRPQGSKAEKEDGEESDTDEKCTICLSMLEDGEDVR 306
Query: 278 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 307 RLPCMHLFHQVCVDQWLATSKKCPICRVDIE 337
>gi|291394329|ref|XP_002713561.1| PREDICTED: ring finger protein 165 [Oryctolagus cuniculus]
Length = 347
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|296222604|ref|XP_002757254.1| PREDICTED: RING finger protein 165 [Callithrix jacchus]
Length = 346
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 203 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 262
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 263 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 322
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 323 QWLAMSKKCPICRVDIE 339
>gi|57165361|ref|NP_689683.2| RING finger protein 165 isoform 1 [Homo sapiens]
gi|114672999|ref|XP_529953.2| PREDICTED: RING finger protein 165 isoform 2 [Pan troglodytes]
gi|332236807|ref|XP_003267592.1| PREDICTED: RING finger protein 165 isoform 2 [Nomascus leucogenys]
gi|402903044|ref|XP_003914393.1| PREDICTED: RING finger protein 165 [Papio anubis]
gi|74762404|sp|Q6ZSG1.1|RN165_HUMAN RecName: Full=RING finger protein 165
gi|34534391|dbj|BAC86992.1| unnamed protein product [Homo sapiens]
gi|60738654|tpg|DAA05330.1| TPA_inf: putative ubiquitin ligase component [Homo sapiens]
Length = 346
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 203 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 262
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 263 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 322
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 323 QWLAMSKKCPICRVDIE 339
>gi|157821373|ref|NP_001102914.1| E3 ubiquitin-protein ligase RNF13 precursor [Rattus norvegicus]
gi|81884214|sp|Q66HG0.1|RNF13_RAT RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|51859285|gb|AAH81881.1| Similar to ring finger protein 13 [Rattus norvegicus]
gi|149064725|gb|EDM14876.1| rCG50011, isoform CRA_b [Rattus norvegicus]
gi|149064726|gb|EDM14877.1| rCG50011, isoform CRA_b [Rattus norvegicus]
Length = 380
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|403265414|ref|XP_003924935.1| PREDICTED: RING finger protein 165 [Saimiri boliviensis
boliviensis]
Length = 400
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 257 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 316
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 317 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 376
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 377 QWLAMSKKCPICRVDIE 393
>gi|47210135|emb|CAF95584.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 222 MGAADKGASDDQISRL--PSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
+G+ +GA I R P KR L+ G + D +C ICL+ ++ E+VR+L
Sbjct: 268 LGSVSRGAVQTTIERFTFPHKYKKRKPLQLKIGGEEETDVDEKCTICLSMLEDGEDVRRL 327
Query: 280 PCSHMFHLKCVDQWLRILSCCPLCKQELE 308
PC H+FH CVDQWL CP+C+ ++E
Sbjct: 328 PCMHLFHQGCVDQWLATSRKCPICRVDIE 356
>gi|380799985|gb|AFE71868.1| RING finger protein 165, partial [Macaca mulatta]
Length = 193
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 50 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 109
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 110 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 169
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 170 QWLAMSKKCPICRVDIE 186
>gi|355701932|gb|EHH29285.1| RING finger protein 165, partial [Macaca mulatta]
Length = 326
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 183 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 242
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 243 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 302
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 303 QWLAMSKKCPICRVDIE 319
>gi|444728898|gb|ELW69332.1| RING finger protein 165, partial [Tupaia chinensis]
Length = 327
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 184 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 243
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 244 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 303
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 304 QWLAMSKKCPICRVDIE 320
>gi|348576884|ref|XP_003474215.1| PREDICTED: RING finger protein 165-like [Cavia porcellus]
Length = 336
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 193 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 252
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 253 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 312
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 313 QWLAMSKKCPICRVDIE 329
>gi|410921626|ref|XP_003974284.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Takifugu
rubripes]
Length = 379
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPS 239
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 168 HVVLMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPI 227
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
+YK+ DS C ICL +Y+E +++R LPCSH +H KCVD WL +
Sbjct: 228 HKYKKGDSY------------DVCAICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKK 275
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 276 TCPVCKQKV 284
>gi|149064727|gb|EDM14878.1| rCG50011, isoform CRA_c [Rattus norvegicus]
Length = 353
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 142 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 201
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 202 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 249
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 250 TCPVCKQKV 258
>gi|355755011|gb|EHH58878.1| RING finger protein 165, partial [Macaca fascicularis]
Length = 326
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 183 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 242
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 243 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 302
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 303 QWLAMSKKCPICRVDIE 319
>gi|334325346|ref|XP_001371377.2| PREDICTED: RING finger protein 165-like [Monodelphis domestica]
Length = 492
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVP---------LISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 358 NYPYPQLHFLALQGLNPNRHTSAVRESYEELLQLEDRLGNVSRGAVQNTIERFTFPHKYK 417
Query: 244 RVDSNLEAGNSAPANE---DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ G E D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 418 KRRPQEGKGKKEDGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 477
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 478 PICRVDIE 485
>gi|348581670|ref|XP_003476600.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Cavia porcellus]
Length = 396
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 184 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLGKDQLKKLPV 243
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 244 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 291
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 292 TCPVCKQKV 300
>gi|195157042|ref|XP_002019405.1| GL12252 [Drosophila persimilis]
gi|194115996|gb|EDW38039.1| GL12252 [Drosophila persimilis]
Length = 1345
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 15/113 (13%)
Query: 201 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 256
L L + PL LG + +GAA ++GA+ + I R LP +Y+R+ E+
Sbjct: 1221 LHLEIGLATPL---SLGSRIVIGAARPNRGATLETIERNTLP-HKYRRLRRPSES----- 1271
Query: 257 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ED E C ICL+ ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1272 -DEDAEKCAICLSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1323
>gi|195640466|gb|ACG39701.1| protein binding protein [Zea mays]
Length = 268
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
++G+ D+G SD+ IS L W+YK +G + +C ICL+ ++ +E + LP
Sbjct: 184 SVGSEDRGLSDELISYLQPWKYK------ASGFFSRKTNHDDCPICLSTFRNRETMITLP 237
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WLR+ CP+CK EL
Sbjct: 238 CMHHYHAACVTKWLRVNKTCPVCKYEL 264
>gi|198454685|ref|XP_001359674.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
gi|198132908|gb|EAL28824.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
Length = 1343
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 15/113 (13%)
Query: 201 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 256
L L + PL LG + +GAA ++GA+ + I R LP +Y+R+ E+
Sbjct: 1219 LHLEIGLATPL---SLGSRIVIGAARPNRGATLETIERNTLP-HKYRRLRRPSES----- 1269
Query: 257 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ED E C ICL+ ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1270 -DEDAEKCAICLSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1321
>gi|209881414|ref|XP_002142145.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557751|gb|EEA07796.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 413
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 218 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG-NSAPANEDPECCICLAKYKEKEEV 276
+ M ++G ++D I + S + S L+ G NS P++E P C +CL++ E V
Sbjct: 322 FGMADANNNRGVNNDVILTI-SQKAFIYHSQLQVGSNSEPSDEPPMCTVCLSEVNNGENV 380
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
KL C H+FHL+C+ +WLR+ CPLCK ++
Sbjct: 381 VKLNCQHLFHLQCIQEWLRMSVICPLCKVDV 411
>gi|164663850|ref|NP_001106884.1| E3 ubiquitin-protein ligase RNF13 isoform a precursor [Mus
musculus]
gi|341941985|sp|O54965.2|RNF13_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|34849794|gb|AAH58182.1| Rnf13 protein [Mus musculus]
gi|74192298|dbj|BAE34334.1| unnamed protein product [Mus musculus]
gi|148703375|gb|EDL35322.1| ring finger protein 13, isoform CRA_b [Mus musculus]
gi|148703379|gb|EDL35326.1| ring finger protein 13, isoform CRA_b [Mus musculus]
Length = 381
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|2746335|gb|AAC03770.1| RING zinc finger protein [Mus musculus]
Length = 381
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|377520133|ref|NP_001243687.1| RING finger protein 165 isoform 2 [Homo sapiens]
gi|410052644|ref|XP_003953329.1| PREDICTED: RING finger protein 165 isoform 1 [Pan troglodytes]
gi|426385861|ref|XP_004059416.1| PREDICTED: RING finger protein 165 [Gorilla gorilla gorilla]
gi|441602936|ref|XP_004087767.1| PREDICTED: RING finger protein 165 [Nomascus leucogenys]
gi|193783761|dbj|BAG53743.1| unnamed protein product [Homo sapiens]
Length = 154
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISR 236
++ +Y +P L FL L P +L +G +GA + I R
Sbjct: 12 QMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIER 71
Query: 237 LP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
+YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQ
Sbjct: 72 FTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQ 131
Query: 293 WLRILSCCPLCKQELE 308
WL + CP+C+ ++E
Sbjct: 132 WLAMSKKCPICRVDIE 147
>gi|348535847|ref|XP_003455409.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Oreochromis
niloticus]
Length = 381
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 168 HVVLLPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 227
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
+YK+ D N + C ICL +Y+E +++R LPCSH +H KCVD WL +
Sbjct: 228 HKYKKGD-NYDV-----------CAICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKK 275
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 276 TCPVCKQKV 284
>gi|47230399|emb|CAF99592.1| unnamed protein product [Tetraodon nigroviridis]
Length = 469
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 15/176 (8%)
Query: 148 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 207
RT+ EL S + P LH + L+Y + +
Sbjct: 287 RTAWELGIETVAPYPPAGHLHSHLPPYHPPPRLHHFPFMHAGISELTYPHIRYISSRMTG 346
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLP-SWRYKRVDSNLEA------------GNS 254
+L +G ++GAS I R +YK+V ++ A
Sbjct: 347 FGRTYEDLLHLEERLGTVNRGASQGTIERCTYPHKYKKVSPHVSAVCPQQRKLHSKQDED 406
Query: 255 APANEDPE--CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
A+ED E C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 407 EGADEDTEEKCTICLSILEEGEDVRRLPCMHLFHQLCVDQWLVTNKKCPICRVDIE 462
>gi|414885025|tpg|DAA61039.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 241
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 26/148 (17%)
Query: 60 WMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----RQ 115
W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY R
Sbjct: 89 WISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRH 148
Query: 116 L-YASQVDGFSLPDVEQQRSSEDS-------------------RFSHLMNKCRTSLELFF 155
L Q + P + +SSE R S L +T ++ FF
Sbjct: 149 LDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDCFF 208
Query: 156 AIWFVMGNVWVFDSRFGS--FQRAPNLH 181
A+WFV+GNVW+F R S Q APN++
Sbjct: 209 AVWFVVGNVWIFGGRSISSDAQDAPNMY 236
>gi|432854518|ref|XP_004067940.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Oryzias latipes]
Length = 375
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 172 GSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-S 230
G + HV+ I + Y PFLL + +C + + + + A K
Sbjct: 159 GDYMYDKGGHVVLIPDFSLPLEYYLLPFLLIVAICLILIAVFMITKAVQDCRKAWKSRLR 218
Query: 231 DDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
DQ+ +LP +Y++ DS C ICL +Y+E +++R LPCSH +H KCV
Sbjct: 219 KDQLKKLPIHKYQKGDSY------------DVCAICLDEYEEGDKLRVLPCSHAYHSKCV 266
Query: 291 DQWL-RILSCCPLCKQEL 307
D WL + CP+CKQ++
Sbjct: 267 DPWLTKTKKTCPVCKQKV 284
>gi|351705693|gb|EHB08612.1| RING finger protein 13 [Heterocephalus glaber]
Length = 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPS 239
H++ + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFNLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLGKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|148703376|gb|EDL35323.1| ring finger protein 13, isoform CRA_c [Mus musculus]
Length = 354
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 142 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 201
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 202 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 249
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 250 TCPVCKQKV 258
>gi|45382515|ref|NP_990686.1| E3 ubiquitin-protein ligase RNF13 precursor [Gallus gallus]
gi|21362882|sp|Q90972.1|RNF13_CHICK RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName:
Full=C-RZF; AltName: Full=RING finger protein 13; Flags:
Precursor
gi|1321818|emb|CAA64725.1| RING zinc finger protein [Gallus gallus]
gi|60116919|gb|AAX14391.1| RING finger protein 13 [Gallus gallus]
gi|1589724|prf||2211437A RING finger protein
Length = 381
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|432108101|gb|ELK33079.1| RING finger protein 165 [Myotis davidii]
Length = 362
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVP--LISSV-------LGYNMNMGAADKGASDDQISRL--PSWRY 242
+Y +P L FL L P IS+V L +G +GA + I R P
Sbjct: 228 NYPYPQLHFLALQGLNPSRHISAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 287
Query: 243 KRVDSNLEAGNSAP--ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
KR N + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 288 KRRPQNGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 347
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 348 PICRVDIE 355
>gi|195605866|gb|ACG24763.1| protein binding protein [Zea mays]
Length = 268
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
++G+ D+G SD+ IS L W+YK S N D +C ICL+ ++ +E + LP
Sbjct: 184 SVGSEDRGLSDELISYLQPWKYK-----ASGFFSRKTNHD-DCPICLSTFRNRETMITLP 237
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WLR+ CP+CK EL
Sbjct: 238 CMHHYHAACVTKWLRVNKTCPVCKYEL 264
>gi|223943525|gb|ACN25846.1| unknown [Zea mays]
gi|413953444|gb|AFW86093.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 268
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
++G+ D+G SD+ IS L W+YK S N D +C ICL+ ++ +E + LP
Sbjct: 184 SVGSEDRGLSDELISYLQPWKYK-----ASGFFSRKTNHD-DCPICLSTFRNRETMITLP 237
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WLR+ CP+CK EL
Sbjct: 238 CMHHYHAACVTKWLRVNKTCPVCKYEL 264
>gi|392345650|ref|XP_003749329.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Rattus
norvegicus]
Length = 278
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 67 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 126
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 127 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 174
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 175 TCPVCKQKV 183
>gi|194221716|ref|XP_001491239.2| PREDICTED: e3 ubiquitin-protein ligase RNF13 [Equus caballus]
Length = 381
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H+L + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HILLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRVLPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|118349920|ref|XP_001008241.1| Zinc finger, C3HC4 type [Tetrahymena thermophila]
gi|89290008|gb|EAR87996.1| Zinc finger, C3HC4 type [Tetrahymena thermophila SB210]
Length = 779
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 237 LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRI 296
+P+ YK +D N +E EC ICL YKE+++VR C H++H C+DQWL
Sbjct: 304 MPAMFYKEIDLN--------KDEQEECTICLEGYKEEDKVRISICGHLYHQACIDQWLVA 355
Query: 297 LSCCPLCKQEL 307
+ CP C+QEL
Sbjct: 356 HTNCPYCRQEL 366
>gi|297275258|ref|XP_001090387.2| PREDICTED: hypothetical protein LOC702104 [Macaca mulatta]
Length = 634
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 179 NLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGA 229
V I + +Y +P L FL L P +L +G +GA
Sbjct: 485 QFQVRPIPXVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGA 544
Query: 230 SDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 285
+ I R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+F
Sbjct: 545 VQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLF 604
Query: 286 HLKCVDQWLRILSCCPLCKQELE 308
H CVDQWL + CP+C+ ++E
Sbjct: 605 HQLCVDQWLAMSKKCPICRVDIE 627
>gi|209881207|ref|XP_002142042.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557648|gb|EEA07693.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 409
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 144/361 (39%), Gaps = 85/361 (23%)
Query: 15 SSTTVPYSSSPPATE---DRMARN-------RPAARAGAPSFLIRTAMRISRASTWMTLE 64
+S +P S+ + E +R RN +P AR A LI+ +TW
Sbjct: 67 NSQHIPISTELTSIELDSNRGIRNYGMGSIYQPIARENA---LIQLVYHYPEKTTW---- 119
Query: 65 LLALLVQISIITF----TLSISKKESPIWPMRIWIVGYDIGCL-----LSLLLLYGRYRQ 115
L +++I I+F TL+I+ ++V Y C+ LS+ LL Q
Sbjct: 120 FLHYMLRIGAISFMTLGTLTIA-----------FLVIYQSQCIKTSKYLSIWLLIHAILQ 168
Query: 116 LYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRT-----------SLELFFAIWFVMGNV 164
+ + + + + +Q ++R ++++ + L + + IWF +G
Sbjct: 169 IIQAICRIYYIKVLGKQPIGPNTRITYILQSIKKLTDSEAWKRGKILSVIYYIWFTIGFY 228
Query: 165 WVFD-----SRFGSFQRAPNLHVLCISLLAWNALSYS-----------------FPFLLF 202
W+ + ++ + +L + + ++ LS S +PF L
Sbjct: 229 WILNVSNSQTQVNEIYESDSLIISWLHRRTYSLLSDSVQRIFANLSSVDIKSTIWPFYLL 288
Query: 203 LLLCCCVPLISSVLGYNMNM----------GAADKGASDDQISRLP-----SWRYKRVDS 247
++L C + +I + + + G K + D++ LP W Y++
Sbjct: 289 IMLFCTLRIILLLATFYLTFPLSTSHLEYPGNKTKSFTLDKLMMLPVKTYSEWIYEKEQE 348
Query: 248 NLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ + N C ICL + + +R LPC+H FH C+D WL + CPLC+Q L
Sbjct: 349 EILNKKTNDRNIQDSCIICLTDFSCSDLIRCLPCNHSFHESCIDVWLLRSAVCPLCQQTL 408
Query: 308 E 308
E
Sbjct: 409 E 409
>gi|326926239|ref|XP_003209310.1| PREDICTED: e3 ubiquitin-protein ligase RNF13-like [Meleagris
gallopavo]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|41054856|ref|NP_957338.1| ring finger protein 13 [Danio rerio]
gi|27881904|gb|AAH44449.1| Ring finger protein 13 [Danio rerio]
Length = 377
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 169 HVILMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ DS C ICL +Y+E E +R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGDSY------------DVCAICLDEYEEGERLRVLPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|41351101|gb|AAH65620.1| Ring finger protein 13 [Danio rerio]
Length = 377
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 169 HVILMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ DS C ICL +Y+E E +R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGDSY------------DVCAICLDEYEEGERLRVLPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|301119555|ref|XP_002907505.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106017|gb|EEY64069.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 551
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGN--------SAPANEDPECCICLAKYKEKEEVRK 278
+G + +++ +L +Y R + N E+ + NED C ICL ++++ E+VR
Sbjct: 438 RGVTKERLDQLRITKYNRAERNPESPTELLSPTSVGSIENEDI-CPICLIEFEDGEDVRN 496
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH+ C+D+WL+ + CP+CK ++
Sbjct: 497 LPCKHIFHVACIDEWLKRNTSCPMCKSNVD 526
>gi|293336774|ref|NP_001168563.1| uncharacterized protein LOC100382345 [Zea mays]
gi|223949189|gb|ACN28678.1| unknown [Zea mays]
gi|413924038|gb|AFW63970.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 310
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 212 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 271
+ + G A +G D I LP++ Y++ ++L APA+E C +CL +++
Sbjct: 108 VRTSTGGTPASSAEPRGLEDAVIRALPAFSYRKKPADLPPSAPAPASE---CAVCLGEFE 164
Query: 272 EKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
E + VR LP C H+FH+ CVD WL+ + CPLC+
Sbjct: 165 EGDSVRMLPACLHVFHVGCVDAWLQGNASCPLCR 198
>gi|224061170|ref|XP_002189845.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Taeniopygia guttata]
Length = 381
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|363743996|ref|XP_414696.3| PREDICTED: RING finger protein 165 [Gallus gallus]
Length = 401
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 222 MGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
+G+ +GA + I R +YK+ + E + ++ D +C ICL+ ++ E+VR
Sbjct: 304 LGSVSRGAVQNTIERFTFPHKYKKRRPQEGKAEQEDGEESDTDEKCTICLSMLEDGEDVR 363
Query: 278 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 364 RLPCMHLFHQVCVDQWLATSKKCPICRVDIE 394
>gi|449514096|ref|XP_002195312.2| PREDICTED: RING finger protein 165 [Taeniopygia guttata]
Length = 372
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 222 MGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
+G+ +GA + I R +YK+ + E + ++ D +C ICL+ ++ E+VR
Sbjct: 275 LGSVSRGAVQNTIERFTFPHKYKKRRPQEGKAEQDDGEESDTDEKCTICLSMLEDGEDVR 334
Query: 278 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 335 RLPCMHLFHQVCVDQWLATSKKCPICRVDIE 365
>gi|301765498|ref|XP_002918178.1| PREDICTED: RING finger protein 165-like [Ailuropoda melanoleuca]
Length = 369
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 235 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 294
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 295 KRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 354
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 355 PICRVDIE 362
>gi|350578446|ref|XP_003480368.1| PREDICTED: RING finger protein 165-like [Sus scrofa]
Length = 345
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 30/198 (15%)
Query: 141 SHLMNKCRTSLELFFAIWFVMG------------NVWVFDSRFGSFQRAPNLHVL----- 183
SH M C++ L L F V + + P +H
Sbjct: 141 SHRMGLCQSQLSLHLEACFRQDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHHFPRNSS 200
Query: 184 CISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQI 234
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 201 STQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTI 260
Query: 235 SRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CV
Sbjct: 261 ERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCV 320
Query: 291 DQWLRILSCCPLCKQELE 308
DQWL + CP+C+ ++E
Sbjct: 321 DQWLAMSKKCPICRVDIE 338
>gi|328776000|ref|XP_001122053.2| PREDICTED: hypothetical protein LOC726305 [Apis mellifera]
Length = 630
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 24/155 (15%)
Query: 170 RFGSFQRAP---NLHVLCISLLAWNALSYS-----FPFLLFLLLCCCVPLISSVLGY--- 218
+G +R P + H + I+ L L S PF F LL P+ + + Y
Sbjct: 473 HYGPHRRPPGPQHRHHIHINWLQHLHLQGSDAHDTMPFSSFGLLHPARPMSAQLENYMRL 532
Query: 219 -NM-NMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEK 273
N+ +M + GA+ + I S ++YKR + +E NED +C ICL+++++
Sbjct: 533 VNLRHMAHINCGATQESIESHTFRYKYKR-EKKVE-------NEDSIEKCTICLSEFEDC 584
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
E VR+LPC H+FH+ CVDQWL CP+C+ ++E
Sbjct: 585 ESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDIE 619
>gi|328708855|ref|XP_003243816.1| PREDICTED: hypothetical protein LOC100573509 isoform 1
[Acyrthosiphon pisum]
gi|328708857|ref|XP_003243817.1| PREDICTED: hypothetical protein LOC100573509 isoform 2
[Acyrthosiphon pisum]
Length = 760
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 11/87 (12%)
Query: 226 DKGASDDQISR--LPSWRYKRVD--SNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
++GAS D I + P +YKR+ S+ N+ +C ICL+ +++ E+VR+LPC
Sbjct: 658 NRGASKDTIEKNTFP-HKYKRIKRSSDEMEDNTE------KCTICLSDFEDTEDVRRLPC 710
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH+ C+DQWL CP+C+ ++E
Sbjct: 711 MHLFHVDCIDQWLSSNKRCPICRVDIE 737
>gi|428174163|gb|EKX43061.1| hypothetical protein GUITHDRAFT_61154, partial [Guillardia theta
CCMP2712]
Length = 73
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 229 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLK 288
AS+ QISRLP R++ A E ECCICL +Y E++RKLPC H FH
Sbjct: 1 ASEGQISRLPFERFE------PATGKGSGEEATECCICLCEYDVGEKLRKLPCLHRFHSV 54
Query: 289 CVDQWLRILSCCPLCKQEL 307
CVD+WL CP+CK+ +
Sbjct: 55 CVDRWLLSNKMCPICKESI 73
>gi|426218145|ref|XP_004003310.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Ovis aries]
Length = 380
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|115497538|ref|NP_001069610.1| E3 ubiquitin-protein ligase RNF13 precursor [Bos taurus]
gi|122143536|sp|Q0VD51.1|RNF13_BOVIN RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|111308417|gb|AAI19834.1| Ring finger protein 13 [Bos taurus]
gi|296491071|tpg|DAA33154.1| TPA: ring finger protein 13 [Bos taurus]
gi|440896858|gb|ELR48673.1| E3 ubiquitin-protein ligase RNF13 [Bos grunniens mutus]
Length = 380
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|345802719|ref|XP_547590.3| PREDICTED: RING finger protein 165 [Canis lupus familiaris]
Length = 347
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 213 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 272
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 273 KRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 332
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 333 PICRVDIE 340
>gi|255582096|ref|XP_002531843.1| ring finger protein, putative [Ricinus communis]
gi|223528514|gb|EEF30541.1| ring finger protein, putative [Ricinus communis]
Length = 205
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 12/97 (12%)
Query: 213 SSVLGYNMN-MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 271
S+V N+N A D+G +S++P +Y E+G + P + C ICL ++
Sbjct: 85 SAVQAANLNPEQAIDRGIKKQSLSQIPEVKY-------ESGLNIPVTD---CPICLGEFA 134
Query: 272 EKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
E E+VR LP C+H FH+KC+D+W+ S CPLC+Q L
Sbjct: 135 EGEKVRVLPKCNHGFHVKCIDKWILSHSSCPLCRQPL 171
>gi|410977656|ref|XP_003995218.1| PREDICTED: RING finger protein 165 [Felis catus]
Length = 344
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 201 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 260
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 261 RFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 320
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 321 QWLAMSKKCPICRVDIE 337
>gi|301776154|ref|XP_002923497.1| PREDICTED: RING finger protein 13-like [Ailuropoda melanoleuca]
gi|281353739|gb|EFB29323.1| hypothetical protein PANDA_012636 [Ailuropoda melanoleuca]
Length = 381
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|57103676|ref|XP_534303.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Canis lupus
familiaris]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|189522117|ref|XP_701217.3| PREDICTED: RING finger protein 165 [Danio rerio]
Length = 347
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 163 NVWVFDSRFGSFQRAPNLH-----VLCISLLAWNALSYSFPFLLFLLLCCCVPL------ 211
++ + + +P LH ++ +Y +P L L L P
Sbjct: 178 HISPLTQHYQHYLTSPRLHHFPRNTTSAQVVVHEIRNYPYPQLHLLALQSLSPSRHATAV 237
Query: 212 ---ISSVLGYNMNMGAADKGASDDQISRL--PSWRYKRVDSNLEAG-NSAPANEDPECCI 265
+L +G ++GA I R P KR L+ G + + D +C I
Sbjct: 238 RESYEELLQLEDRLGNVNRGAVQATIERFTFPHKYKKRRPLELKIGMDEEELDTDEKCTI 297
Query: 266 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
CL+ +++E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 298 CLSMLEDEEDVRRLPCMHLFHQACVDQWLATNKKCPICRVDIE 340
>gi|355716766|gb|AES05716.1| ring finger protein 13 [Mustela putorius furo]
Length = 380
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|344269880|ref|XP_003406775.1| PREDICTED: RING finger protein 165-like [Loxodonta africana]
Length = 504
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 370 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 429
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 430 KRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 489
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 490 PICRVDIE 497
>gi|325183549|emb|CCA18010.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 849
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G S I +LP+++Y V NL+ P ++P+C IC + ++E ++V+ LPC H +H
Sbjct: 767 RGVSQSLIDQLPTYQYTAV-HNLQ--QELPKVKNPDCLICRSAFREGDKVKSLPCFHSYH 823
Query: 287 LKCVDQWLRILSCCPLCK 304
+CVD WL + CPLC+
Sbjct: 824 KRCVDAWLSLSQVCPLCQ 841
>gi|357483919|ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago truncatula]
gi|355513581|gb|AES95204.1| RING-H2 finger protein ATL4M [Medicago truncatula]
gi|388507050|gb|AFK41591.1| unknown [Medicago truncatula]
Length = 234
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
KG S D +S++P + K N+EA + E C +CL ++ E VR LP C
Sbjct: 157 GGSKGLSVDSVSKIP--KIKITADNIEA-----SGEKVSCSVCLQDFQLGETVRSLPHCH 209
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D WL CPLC+++L
Sbjct: 210 HMFHLPCIDMWLLRHGSCPLCRRDL 234
>gi|281346415|gb|EFB21999.1| hypothetical protein PANDA_006572 [Ailuropoda melanoleuca]
Length = 326
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 183 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 242
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 243 RFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 302
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 303 QWLAMSKKCPICRVDIE 319
>gi|74191108|dbj|BAE39388.1| unnamed protein product [Mus musculus]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
+ K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKIKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|388502038|gb|AFK39085.1| unknown [Lotus japonicus]
Length = 89
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 249 LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
LE G PANE D ECCIC++ Y++ E+ LPC+H FH C+ +WL++ + CPL
Sbjct: 18 LETGIGFPANERALSPEDAECCICISSYEDGAELHSLPCNHHFHSTCIVKWLKMNATCPL 77
Query: 303 CK 304
CK
Sbjct: 78 CK 79
>gi|410971206|ref|XP_003992063.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Felis catus]
Length = 381
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|410913211|ref|XP_003970082.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Takifugu
rubripes]
Length = 1006
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDS-------NLEAGNSAPANEDPE--CCICLAKYK 271
+G ++GAS I R +YK+V + + A+ED E C ICL+ +
Sbjct: 903 LGTVNRGASQGTIERCTYPHKYKKVSRFACSRKLHDKQDEEEGADEDTEEKCTICLSILE 962
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 963 EGEDVRRLPCMHLFHQLCVDQWLVTNKKCPICRVDIE 999
>gi|390179083|ref|XP_003736797.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859705|gb|EIM52870.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1224
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS++Y N E N + C +C+ ++ K+ +R LPCSH
Sbjct: 1099 AKPRGLTRNEIDQLPSYKY-----NPEVHNG----DQTSCVVCMCDFELKQLLRVLPCSH 1149
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 1150 EFHAKCVDKWLRSNRTCPICR 1170
>gi|224084358|ref|XP_002307271.1| predicted protein [Populus trichocarpa]
gi|222856720|gb|EEE94267.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
MG G S+D I + L W+Y+ V AG S+ +ED CCIC +Y +++++ KL
Sbjct: 568 MGNVSTGLSEDAIVANLKRWKYQTV-----AGGSS--SEDEPCCICQEEYADEDDLGKLK 620
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQ 305
C H FH C+ +WL + CP+CK+
Sbjct: 621 CGHDFHFNCIKKWLVQKNNCPICKK 645
>gi|194214648|ref|XP_001498671.2| PREDICTED: RING finger protein 165-like [Equus caballus]
Length = 407
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 273 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 332
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 333 KRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 392
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 393 PICRVDIE 400
>gi|21536693|gb|AAM61025.1| unknown [Arabidopsis thaliana]
Length = 340
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D I+ LPS RYK E N NE C IC Y++ E++ LPC
Sbjct: 255 VGTESRGLSADTIASLPSKRYK------EGDNQNGTNE--SCVICRLDYEDDEDLILLPC 306
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H +C++ WL+I CP+C E+
Sbjct: 307 KHSYHSECINNWLKINKVCPVCSAEV 332
>gi|297830656|ref|XP_002883210.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329050|gb|EFH59469.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D I+ LPS RYK E N NE C IC Y++ E++ LPC
Sbjct: 252 VGTESRGLSADTIASLPSKRYK------EGDNQNGTNE--SCVICRLDYEDDEDLILLPC 303
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H +C++ WL+I CP+C E+
Sbjct: 304 KHSYHSECINNWLKINKVCPVCSAEV 329
>gi|18402411|ref|NP_566651.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
gi|75335434|sp|Q9LT17.1|BBR_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER-related; Short=AtBBR
gi|11994203|dbj|BAB01306.1| unnamed protein product [Arabidopsis thaliana]
gi|15010578|gb|AAK73948.1| AT3g19910/MPN9_15 [Arabidopsis thaliana]
gi|15028363|gb|AAK76658.1| unknown protein [Arabidopsis thaliana]
gi|19310707|gb|AAL85084.1| unknown protein [Arabidopsis thaliana]
gi|332642786|gb|AEE76307.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
Length = 340
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D I+ LPS RYK E N NE C IC Y++ E++ LPC
Sbjct: 255 VGTESRGLSADTIASLPSKRYK------EGDNQNGTNE--SCVICRLDYEDDEDLILLPC 306
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H +C++ WL+I CP+C E+
Sbjct: 307 KHSYHSECINNWLKINKVCPVCSAEV 332
>gi|224088216|ref|XP_002308375.1| predicted protein [Populus trichocarpa]
gi|222854351|gb|EEE91898.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 7/75 (9%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+ P +K+VD GN +ED +C ICLA+Y+E +++R LPC H +H+ CVD+W
Sbjct: 450 VDSFPLKNHKKVDK--VEGN----DEDEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKW 503
Query: 294 LR-ILSCCPLCKQEL 307
L+ I CPLC+ ++
Sbjct: 504 LKEIHGVCPLCRGDV 518
>gi|291399975|ref|XP_002716309.1| PREDICTED: ring finger protein 13 [Oryctolagus cuniculus]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|357127647|ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like [Brachypodium
distachyon]
Length = 210
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 25/150 (16%)
Query: 175 QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV-----------PLISSVLGYNMN-- 221
Q++ + VL +++ AL+ F L LL CC +++ + +MN
Sbjct: 21 QQSFSGRVLLAAVVILFALTVVFVALRVLLYMCCAFGGGGSRGRGGGGLAAGIRRSMNSF 80
Query: 222 --MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
+G++ +G +S LP Y++ S A D EC +CL++ + ++VR+L
Sbjct: 81 GRIGSSRRGLDASALSALPVTAYQK---------STGAAGDAECAVCLSELADGDKVREL 131
Query: 280 P-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
P C H+FH++CVD WLR + CPLC+ E
Sbjct: 132 PNCGHVFHVECVDAWLRSRTTCPLCRAGAE 161
>gi|417399951|gb|JAA46956.1| Putative e3 ubiquitin-protein ligase rnf13 isoform 1 [Desmodus
rotundus]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|410922910|ref|XP_003974925.1| PREDICTED: RING finger protein 165-like [Takifugu rubripes]
Length = 354
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 163 NVWVFDSRFGSFQRAPNLHVL-----CISLLAWNALSYSFPFLLFLLLCCCVPL------ 211
++ + + +P +H ++ +Y +P L L L P
Sbjct: 185 HIHPLPQHYQHYLTSPRMHHFPRNNASTQVVVHEIRNYPYPQLHLLALQSLNPSRHASAV 244
Query: 212 ---ISSVLGYNMNMGAADKGASDDQISRL--PSWRYKRVDSNLEAG-NSAPANEDPECCI 265
+L +G+ ++GA I R P KR+ +L+ + + D +C I
Sbjct: 245 RESYEELLQLEDRLGSVNRGAVQTTIERFTFPHKYKKRIPQDLKMCLDDEELDTDEKCTI 304
Query: 266 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
CL+ ++ E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 305 CLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIE 347
>gi|350591630|ref|XP_003358656.2| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Sus scrofa]
gi|417515473|gb|JAA53565.1| ring finger protein 13 [Sus scrofa]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|440908835|gb|ELR58817.1| RING finger protein 165, partial [Bos grunniens mutus]
Length = 354
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 211 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 270
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 271 RFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVD 330
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 331 QWLAMSKKCPICRVDIE 347
>gi|344288944|ref|XP_003416206.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Loxodonta
africana]
Length = 381
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|195395466|ref|XP_002056357.1| GJ10273 [Drosophila virilis]
gi|194143066|gb|EDW59469.1| GJ10273 [Drosophila virilis]
Length = 1174
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + +++ +LPS++Y N EA N + C +C+ ++ ++ +R LPCSH
Sbjct: 1042 AKPRGLTRNEVDQLPSYKY-----NPEAHNG----DQSSCVVCMCDFELRQLLRVLPCSH 1092
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 1093 EFHAKCVDKWLRSNRTCPICR 1113
>gi|242062904|ref|XP_002452741.1| hypothetical protein SORBIDRAFT_04g031560 [Sorghum bicolor]
gi|241932572|gb|EES05717.1| hypothetical protein SORBIDRAFT_04g031560 [Sorghum bicolor]
Length = 194
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
AA+KG + + LP+ Y V + +AG+ EC ICLA+++E + +R LP C
Sbjct: 68 AANKGVKKEVLRSLPTVTY--VSDSCKAGDEEEGGGADECAICLAEFEEGQAMRVLPQCG 125
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H FH CVD WLR S CP C++ L
Sbjct: 126 HAFHAACVDTWLRAHSSCPSCRRVL 150
>gi|395527967|ref|XP_003766107.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Sarcophilus harrisii]
Length = 382
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|126338112|ref|XP_001363895.1| PREDICTED: e3 ubiquitin-protein ligase RNF13 [Monodelphis
domestica]
Length = 382
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|358418714|ref|XP_617227.4| PREDICTED: RING finger protein 165 [Bos taurus]
gi|359079406|ref|XP_002697858.2| PREDICTED: RING finger protein 165 [Bos taurus]
Length = 373
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 239 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 298
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 299 KRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 358
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 359 PICRVDIE 366
>gi|358337342|dbj|GAA55711.1| E3 ubiquitin-protein ligase RNF12-B [Clonorchis sinensis]
Length = 483
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
S P+ PEC ICL +Y+ K+++R LPC H FH KC+D W S CP C+
Sbjct: 245 STPSRGHPECEICLTEYRNKDQLRHLPCGHAFHKKCIDAWFNESSTCPKCR 295
>gi|53792039|dbj|BAD54624.1| hypothetical protein [Oryza sativa Japonica Group]
gi|53793096|dbj|BAD54305.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125555625|gb|EAZ01231.1| hypothetical protein OsI_23259 [Oryza sativa Indica Group]
Length = 190
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 178 PNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP--LISSVLGYNMNMGAA-------DKG 228
P ++ +S + + +F L+ L CCC +V GY GA G
Sbjct: 25 PPRGLIVVSAVFLSIFLATFLTLMSLAFCCCRRWRERDAVSGYVDGEGAVVVVAAGESGG 84
Query: 229 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHL 287
+ LP V S+ + G +A + EC +CL +E E VR+LP C H++H
Sbjct: 85 GEPFPVEALPPAYAYVVGSSDDGGATAASGVGRECAVCLGAVREGEMVRRLPACEHVYHA 144
Query: 288 KCVDQWLRILSCCPLCKQELE 308
C+D+WL CPLC++EL+
Sbjct: 145 DCIDRWLAAHRTCPLCRRELD 165
>gi|195037839|ref|XP_001990368.1| GH19305 [Drosophila grimshawi]
gi|193894564|gb|EDV93430.1| GH19305 [Drosophila grimshawi]
Length = 885
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS++Y N EA N + C +C+ ++ ++ +R LPCSH
Sbjct: 757 AKPRGLTRNEIDQLPSYKY-----NPEAHNG----DQSSCVVCMCDFELRQMLRVLPCSH 807
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 808 EFHAKCVDKWLRSNRTCPICR 828
>gi|296473789|tpg|DAA15904.1| TPA: ring finger protein 165-like [Bos taurus]
Length = 571
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 437 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 496
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 497 KRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 556
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 557 PICRVDIE 564
>gi|221110595|ref|XP_002160653.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like, partial [Hydra
magnipapillata]
Length = 359
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G S ++ +PS+R+ G + N +C +C+++Y +E++R+LPC+H FH
Sbjct: 281 RGLSKTELDTIPSFRFS-------TGTAKETNS--KCVVCMSEYVNREKLRRLPCTHDFH 331
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
KC+D+WLR CP+C+ +++
Sbjct: 332 SKCIDKWLRSNRTCPVCRDDVK 353
>gi|393909281|gb|EFO18865.2| ring finger-H2 protein [Loa loa]
Length = 505
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L CSH+FH+
Sbjct: 421 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCSHVFHI 474
Query: 288 KCVDQWLRILSCCPLCKQELER 309
C+D+WL CP+C+ ++++
Sbjct: 475 VCIDRWLVYNKKCPVCRLDVDK 496
>gi|145507746|ref|XP_001439828.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407023|emb|CAK72431.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 213 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKE 272
+L +G KG + QI +LP KR N A ED +C +CL ++KE
Sbjct: 242 EQLLELEEQIGNVPKGLTKQQIKQLP----KR------TLNQANIPED-KCSVCLFEFKE 290
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E+VR+LPC H++H C+ WL+ CPLCK E+E
Sbjct: 291 EEKVRELPCKHIYHSSCIKNWLQNNKQCPLCKTEIE 326
>gi|119621880|gb|EAX01475.1| ring finger protein 165, isoform CRA_b [Homo sapiens]
Length = 260
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 222 MGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
+G +GA + I R +YK+ D + ++ D +C ICL+ ++ E+VR
Sbjct: 163 LGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVR 222
Query: 278 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+LPC H+FH CVDQWL + CP+C+ ++E
Sbjct: 223 RLPCMHLFHQLCVDQWLAMSKKCPICRVDIE 253
>gi|348517369|ref|XP_003446206.1| PREDICTED: RING finger protein 165-like [Oreochromis niloticus]
Length = 351
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRL--PSWRYKRVDSNLEAG-NSAPANEDPECCICLAKYKEKEEVRK 278
+G+ ++GA I R P KR+ +L+ + + D +C ICL+ ++ E+VR+
Sbjct: 255 LGSVNRGAVQTTIERFTFPHKYKKRIPQDLKMCLDDEELDTDEKCTICLSMLEDGEDVRR 314
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 315 LPCMHLFHQACVDQWLATSRKCPICRVDIE 344
>gi|326677584|ref|XP_001920673.3| PREDICTED: RING finger protein 165-like [Danio rerio]
Length = 310
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 171 FGSFQRAPNLHVL-----CISLLAWNALSYSFPFLLFLLLCCCVPLISS---------VL 216
+ + +P +H L ++ +Y +P L L L P S +L
Sbjct: 149 YQHYLASPRMHHLPRNTSTTQVVVHEIRNYPYPQLHLLALQSLSPSRHSSAVRESYEELL 208
Query: 217 GYNMNMGAADKGASDDQISRL--PSWRYKRVDSNLE-AGNSAPANEDPECCICLAKYKEK 273
+G+ +GA I R P KR +L+ N ++ D +C ICL+ ++
Sbjct: 209 QLEDRLGSVSRGAIQTTIERFTFPHKYKKRKPLDLKFCENDEESDVDEKCTICLSMLEDG 268
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 269 EDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIQ 303
>gi|410903686|ref|XP_003965324.1| PREDICTED: RING finger protein 165-like [Takifugu rubripes]
Length = 340
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRL--PSWRY 242
+Y +P L L L P +L +G+ +GA I R P
Sbjct: 207 NYPYPQLHLLALQSLNPSRHATAVRESYEELLQLEDRLGSVSRGAVQTTIERFTFPHKYK 266
Query: 243 KRVDSNLEAGNSAPANE-DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 301
KR ++ G + D C ICL+ ++ E+VR+LPC H+FH CVDQWL CP
Sbjct: 267 KRKPMQMKIGEEEEETDVDERCTICLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCP 326
Query: 302 LCKQELE 308
+C+ ++E
Sbjct: 327 ICRVDIE 333
>gi|327281659|ref|XP_003225564.1| PREDICTED: hypothetical protein LOC100554767 [Anolis carolinensis]
Length = 650
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + DQI LP+ Y V ++E G ++ A C +C+ +Y ++R+LPC H FH
Sbjct: 575 RGLTKDQIDSLPTRNYGSV--SVEEGETSKA-----CSVCIIEYVVGNKLRQLPCMHEFH 627
Query: 287 LKCVDQWLRILSCCPLCKQ 305
C+D+WL S CP+C+Q
Sbjct: 628 FHCIDRWLSDNSTCPICRQ 646
>gi|6005864|ref|NP_009213.1| E3 ubiquitin-protein ligase RNF13 [Homo sapiens]
gi|34577087|ref|NP_899237.1| E3 ubiquitin-protein ligase RNF13 [Homo sapiens]
gi|197101023|ref|NP_001125196.1| E3 ubiquitin-protein ligase RNF13 precursor [Pongo abelii]
gi|114589798|ref|XP_530652.2| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 10 [Pan
troglodytes]
gi|114589802|ref|XP_001142115.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 9 [Pan
troglodytes]
gi|332214389|ref|XP_003256319.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Nomascus
leucogenys]
gi|332214391|ref|XP_003256320.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Nomascus
leucogenys]
gi|397512369|ref|XP_003826520.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Pan paniscus]
gi|426342508|ref|XP_004037884.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Gorilla
gorilla gorilla]
gi|426342510|ref|XP_004037885.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Gorilla
gorilla gorilla]
gi|21362880|sp|O43567.1|RNF13_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|75042231|sp|Q5RCV8.1|RNF13_PONAB RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|2746333|gb|AAC03769.1| RING zinc finger protein [Homo sapiens]
gi|3387925|gb|AAC28641.1| RING zinc finger protein RZF [Homo sapiens]
gi|14602541|gb|AAH09781.1| Ring finger protein 13 [Homo sapiens]
gi|14602579|gb|AAH09803.1| Ring finger protein 13 [Homo sapiens]
gi|48145725|emb|CAG33085.1| RNF13 [Homo sapiens]
gi|55727286|emb|CAH90399.1| hypothetical protein [Pongo abelii]
gi|119599265|gb|EAW78859.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|119599267|gb|EAW78861.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|119599269|gb|EAW78863.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|167773739|gb|ABZ92304.1| ring finger protein 13 [synthetic construct]
gi|189053849|dbj|BAG36109.1| unnamed protein product [Homo sapiens]
gi|193786879|dbj|BAG52202.1| unnamed protein product [Homo sapiens]
gi|306921283|dbj|BAJ17721.1| ring finger protein 13 [synthetic construct]
gi|325463911|gb|ADZ15726.1| ring finger protein 13 [synthetic construct]
gi|410210576|gb|JAA02507.1| ring finger protein 13 [Pan troglodytes]
gi|410254348|gb|JAA15141.1| ring finger protein 13 [Pan troglodytes]
gi|410308004|gb|JAA32602.1| ring finger protein 13 [Pan troglodytes]
gi|410351773|gb|JAA42490.1| ring finger protein 13 [Pan troglodytes]
gi|410351775|gb|JAA42491.1| ring finger protein 13 [Pan troglodytes]
Length = 381
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|312086763|ref|XP_003145205.1| ring finger-H2 protein [Loa loa]
Length = 484
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L CSH+FH+
Sbjct: 400 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCSHVFHI 453
Query: 288 KCVDQWLRILSCCPLCKQELER 309
C+D+WL CP+C+ ++++
Sbjct: 454 VCIDRWLVYNKKCPVCRLDVDK 475
>gi|296227840|ref|XP_002759543.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Callithrix jacchus]
Length = 381
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|402861239|ref|XP_003895008.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Papio
anubis]
gi|402861241|ref|XP_003895009.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Papio
anubis]
gi|380783017|gb|AFE63384.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
gi|383410459|gb|AFH28443.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
gi|384941704|gb|AFI34457.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
Length = 381
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|355746972|gb|EHH51586.1| hypothetical protein EGM_10995 [Macaca fascicularis]
Length = 381
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|297797783|ref|XP_002866776.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312611|gb|EFH43035.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 221
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A KG + D + R+P R +++P E C +CL ++ E VR LP C
Sbjct: 148 AISKGLTGDSLDRIPKVRIT---------DTSP--EIVSCSVCLQDFQVGETVRSLPQCH 196
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D+WLR + CPLC++ L
Sbjct: 197 HMFHLPCIDKWLRAHASCPLCRRHL 221
>gi|148222567|ref|NP_001083709.1| ring finger protein 13 precursor [Xenopus laevis]
gi|39645071|gb|AAH63734.1| MGC68556 protein [Xenopus laevis]
Length = 381
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 195 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPSWRYKRVDSNLEAGN 253
Y PFL+ + +C + +I + + + A + DQ+ +LP ++K+ D
Sbjct: 183 YLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGD------- 235
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQEL 307
E C +CL +Y+E +++R LPCSH +H KCVD WL + CP+CKQ++
Sbjct: 236 -----EYDVCAVCLDEYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>gi|449271045|gb|EMC81660.1| RING finger protein 13 [Columba livia]
Length = 390
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPS 239
HV+ I + Y PFL+ + +C + +I + + + A K DQ+ ++P
Sbjct: 169 HVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARKNRLRKDQLKKIPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ + + + +E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGEWIILCLSR---DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 285
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 286 TCPVCKQKV 294
>gi|395859874|ref|XP_003802254.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Otolemur garnettii]
Length = 380
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 168 HVVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 227
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 228 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 275
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 276 TCPVCKQKV 284
>gi|357478447|ref|XP_003609509.1| RING finger protein [Medicago truncatula]
gi|355510564|gb|AES91706.1| RING finger protein [Medicago truncatula]
Length = 545
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+ P +K+VD+ + GN A +C ICLA+Y++ +++R LPC H +H+ CVD+W
Sbjct: 461 VDSFPLKSHKKVDA-ADGGNDAE-----QCYICLAEYEDGDQIRVLPCKHEYHMSCVDKW 514
Query: 294 LR-ILSCCPLCKQEL 307
L+ I CPLC+ +
Sbjct: 515 LKEIHGVCPLCRSNV 529
>gi|426254067|ref|XP_004020707.1| PREDICTED: RING finger protein 165 [Ovis aries]
Length = 370
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 236 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 295
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 296 KRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 355
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 356 PICRVDIE 363
>gi|195108127|ref|XP_001998644.1| GI23522 [Drosophila mojavensis]
gi|193915238|gb|EDW14105.1| GI23522 [Drosophila mojavensis]
Length = 1020
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS++Y A + + C +C+ ++ ++ +R LPCSH
Sbjct: 887 AKPRGLTRNEIDQLPSYKYN---------PDAHSGDQSSCVVCMCDFELRQLLRVLPCSH 937
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 938 EFHAKCVDKWLRSNRTCPICR 958
>gi|403265778|ref|XP_003925091.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|357143190|ref|XP_003572834.1| PREDICTED: RING-H2 finger protein ATL80-like [Brachypodium
distachyon]
Length = 193
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 259
L + C C + G + + A+KG + + LP+ Y +A +S E
Sbjct: 40 LGLVARCACTRRWARAAGASSSPPGANKGVKKEVLRSLPTVTYVSDGRGGKADSSESEAE 99
Query: 260 DPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
EC ICLA++++ +E+R LP C H FH CVD WLR S CP C++ L
Sbjct: 100 ADECAICLAEFEDGQEMRVLPQCGHGFHAACVDTWLRSHSSCPSCRRVL 148
>gi|195655383|gb|ACG47159.1| protein binding protein [Zea mays]
Length = 271
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
++G +G SD+ IS L W+YK V + +G + +C ICL+ ++ +E + LP
Sbjct: 184 SVGTEYRGLSDELISYLQPWKYKAVKA---SGLFSRKTNHEDCPICLSTFRNRETMITLP 240
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL++ CP+CK EL
Sbjct: 241 CRHHYHAACVTRWLKVNKTCPVCKYEL 267
>gi|195446140|ref|XP_002070646.1| GK10924 [Drosophila willistoni]
gi|194166731|gb|EDW81632.1| GK10924 [Drosophila willistoni]
Length = 1411
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 15/113 (13%)
Query: 201 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 256
L L + PL LG + +G ++GA+ + I R LP +Y+RV E
Sbjct: 1281 LHLEIGLATPL---SLGSRILIGPPRPNRGATLETIERNTLP-HKYRRVRRPSET----- 1331
Query: 257 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ED E C ICL+ ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1332 -DEDAEKCAICLSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1383
>gi|297805668|ref|XP_002870718.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297316554|gb|EFH46977.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 375
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G I LP + YK + + G + A E +C +CL ++ EK+++R LP CSH
Sbjct: 105 DSGLDQAFIDALPVFHYKEIVGSGSVGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHA 164
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FHL C+D WL+ S CPLC+ L
Sbjct: 165 FHLNCIDTWLQSNSTCPLCRGTL 187
>gi|79332615|ref|NP_001032158.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
gi|332010773|gb|AED98156.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
Length = 245
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A KG + D ++R+P R +++P E C +CL ++ E VR LP C
Sbjct: 172 AISKGLTGDSLNRIPKVRIT---------DTSP--EIVSCSVCLQDFQVGETVRSLPHCH 220
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D+WLR + CPLC++ L
Sbjct: 221 HMFHLPCIDKWLRRHASCPLCRRHL 245
>gi|47207180|emb|CAF92164.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 195 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPSWRYKRVDSNLEAGN 253
Y PFL+ + +C + ++ + + + A + DQ+ +LP +YK+ DS
Sbjct: 117 YLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPIHKYKKGDSY----- 171
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQEL 307
C ICL +Y++ +++R LPCSH +H KCVD WL + CP+CKQ++
Sbjct: 172 -------DVCAICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKV 219
>gi|413942672|gb|AFW75321.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 318
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
++G +G SD+ IS L W+YK V + +G + +C ICL+ ++ +E + LP
Sbjct: 231 SVGTEYRGLSDELISYLQPWKYKAVKA---SGLFSRKTNHEDCPICLSTFRNRETMITLP 287
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL++ CP+CK EL
Sbjct: 288 CRHHYHAACVTRWLKVNKTCPVCKYEL 314
>gi|356548563|ref|XP_003542670.1| PREDICTED: uncharacterized protein LOC100783722 [Glycine max]
Length = 540
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+ LP +K+VD + GN A +C ICLA Y+E +++R LPC H +H+ CVD+W
Sbjct: 456 VDSLPLKSHKKVD-GADVGNDAE-----QCYICLADYEEGDQIRVLPCFHEYHMSCVDKW 509
Query: 294 LR-ILSCCPLCK 304
L+ I CPLC+
Sbjct: 510 LKEIHGVCPLCR 521
>gi|388495990|gb|AFK36061.1| unknown [Lotus japonicus]
Length = 237
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 218 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
++ G A KG S D + ++P + D+N +A + E C +CL ++ E VR
Sbjct: 154 FDTGCGGA-KGLSGDSVEKIPKIKIT-TDNNADA-----SGERVSCSVCLQDFQLGETVR 206
Query: 278 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
LP C HMFHL C+D+WL CPLC+++L
Sbjct: 207 SLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL 237
>gi|307203731|gb|EFN82691.1| RING finger protein 165 [Harpegnathos saltator]
Length = 695
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 228 GASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
GA+ + I S +YKRV +E G+ A +C ICL+++++ E VR+LPC H+FH
Sbjct: 608 GATQESIESHTFPHKYKRV-KKVENGDDATE----KCTICLSEFEDCENVRRLPCMHLFH 662
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
+ CVDQWL CP+C+ ++E
Sbjct: 663 IDCVDQWLCTNKRCPICRVDIE 684
>gi|56118680|ref|NP_001008015.1| ring finger protein 13 precursor [Xenopus (Silurana) tropicalis]
gi|51704075|gb|AAH80893.1| ring finger protein 13 [Xenopus (Silurana) tropicalis]
Length = 383
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 195 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPSWRYKRVDSNLEAGN 253
Y PFL+ + +C + +I + + + A + DQ+ +LP ++K+ D
Sbjct: 184 YLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGD------- 236
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQEL 307
E C +CL +Y+E +++R LPCSH +H KCVD WL + CP+CKQ++
Sbjct: 237 -----EYDVCAVCLDEYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 286
>gi|345326230|ref|XP_001507758.2| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Ornithorhynchus
anatinus]
Length = 462
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 248 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 307
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 308 HKFKKGD------------EYDICAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 355
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 356 TCPVCKQKV 364
>gi|194901950|ref|XP_001980514.1| GG17197 [Drosophila erecta]
gi|190652217|gb|EDV49472.1| GG17197 [Drosophila erecta]
Length = 1251
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E+ +ED E C ICL ++ + EVR+LPC
Sbjct: 1149 NRGATLETIERNTLP-HKYRRVRRPSES------DEDAEKCAICLTLFEIENEVRRLPCM 1201
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1202 HLFHTDCVDQWLVTNKHCPICRVDIE 1227
>gi|15239242|ref|NP_201408.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
gi|68565289|sp|Q9FKX5.1|NIPL1_ARATH RecName: Full=NEP1-interacting protein-like 1; AltName:
Full=RING-H2 finger protein ATL27
gi|10177122|dbj|BAB10412.1| unnamed protein product [Arabidopsis thaliana]
gi|46518387|gb|AAS99675.1| At5g66070 [Arabidopsis thaliana]
gi|48958511|gb|AAT47808.1| At5g66070 [Arabidopsis thaliana]
gi|332010772|gb|AED98155.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
Length = 221
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A KG + D ++R+P R +++P E C +CL ++ E VR LP C
Sbjct: 148 AISKGLTGDSLNRIPKVRIT---------DTSP--EIVSCSVCLQDFQVGETVRSLPHCH 196
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D+WLR + CPLC++ L
Sbjct: 197 HMFHLPCIDKWLRRHASCPLCRRHL 221
>gi|115440011|ref|NP_001044285.1| Os01g0755700 [Oryza sativa Japonica Group]
gi|20160754|dbj|BAB89695.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533816|dbj|BAF06199.1| Os01g0755700 [Oryza sativa Japonica Group]
gi|215766318|dbj|BAG98546.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 219 NMNMGAADK--GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 276
+N GA K G I+ LP+ Y +V AG + EC ICL +E + V
Sbjct: 77 TVNAGAPPKQVGLDPSAIAALPTAAYGKVAGGDAAGGTT------ECAICLGAMQEADAV 130
Query: 277 RKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
R LP C H+FH+ C+D+WL S CP+C+ +E
Sbjct: 131 RVLPACRHVFHVACIDKWLASSSSCPVCRAGVE 163
>gi|145519746|ref|XP_001445734.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413200|emb|CAK78337.1| unnamed protein product [Paramecium tetraurelia]
Length = 470
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 211 LISSVLGYNMNMGAADK-GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLA 268
L+++ + N N G D +I +LP R NLE +ED +C ICL
Sbjct: 377 LLNTFIQLNENGTVEGHLGCEDHEIQQLPVRRI-----NLEQ--IKQLDEDHMKCLICLC 429
Query: 269 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+Y+E+++V+ +PC H FH +C+D+WL+ CP+CK ELE
Sbjct: 430 EYEEEDQVKTIPCLHYFHDECIDKWLKKSRHCPICKNELE 469
>gi|297811169|ref|XP_002873468.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319305|gb|EFH49727.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 526
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 215 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKE 272
+L MG S++ +SR L Y++ D E G+ + + ED +C IC ++ +
Sbjct: 432 LLALGEKMGTVSTALSEEALSRSLKQSTYQKTD---ETGSISLSKEDDIKCSICQEEFVD 488
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+EV +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 489 GDEVGTMPCQHMYHVSCVQQWLRMKNWCPICKTSAE 524
>gi|195501805|ref|XP_002097951.1| GE10089 [Drosophila yakuba]
gi|194184052|gb|EDW97663.1| GE10089 [Drosophila yakuba]
Length = 1259
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E+ +ED E C ICL ++ + EVR+LPC
Sbjct: 1157 NRGATLETIERNTLP-HKYRRVRRPSES------DEDAEKCAICLTLFEIENEVRRLPCM 1209
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1210 HLFHTDCVDQWLVTNKHCPICRVDIE 1235
>gi|84994748|ref|XP_952096.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302257|emb|CAI74364.1| hypothetical protein, conserved [Theileria annulata]
Length = 296
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 248 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
NL G+S +E C +CL +Y++ +E+R+LPC+H FH +C+D WL+ + CP+CK
Sbjct: 230 NLFTGDSGELDESLRSCSVCLEEYQQGDEIRRLPCTHSFHKRCIDTWLKKSTICPICK 287
>gi|345305717|ref|XP_003428368.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 165-like
[Ornithorhynchus anatinus]
Length = 357
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 194 SYSFPFLLFLLLCCCVP---------LISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 243
+Y +P L L L P +L +G+ +GA + I R +YK
Sbjct: 223 NYPYPQLHLLALQGLNPNRHTSAVRESYEELLQLEDRLGSVSRGAVQNTIERFTFPHKYK 282
Query: 244 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 300
+ + + + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL C
Sbjct: 283 KRRPQEGKDKKEDGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQVCVDQWLATSKKC 342
Query: 301 PLCKQELE 308
P+C+ ++E
Sbjct: 343 PICRVDIE 350
>gi|115449737|ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|48716363|dbj|BAD22974.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|48716498|dbj|BAD23103.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|113538071|dbj|BAF10454.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|222623928|gb|EEE58060.1| hypothetical protein OsJ_08900 [Oryza sativa Japonica Group]
Length = 320
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A +G + I LP++RY++ + A +S EC +C+++++E+E VR LP C
Sbjct: 110 AEPRGLEEAAIQSLPAFRYRKAIKDTTADSS-------ECAVCISEFQEEERVRLLPSCL 162
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H+FH+ C+D WL+ + CPLC+
Sbjct: 163 HVFHVDCIDTWLQGNANCPLCR 184
>gi|218191836|gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indica Group]
Length = 320
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A +G + I LP++RY++ + A +S EC +C+++++E+E VR LP C
Sbjct: 110 AEPRGLEEAAIQSLPAFRYRKAIKDTTADSS-------ECAVCISEFQEEERVRLLPSCL 162
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H+FH+ C+D WL+ + CPLC+
Sbjct: 163 HVFHVDCIDTWLQGNANCPLCR 184
>gi|242058313|ref|XP_002458302.1| hypothetical protein SORBIDRAFT_03g030870 [Sorghum bicolor]
gi|241930277|gb|EES03422.1| hypothetical protein SORBIDRAFT_03g030870 [Sorghum bicolor]
Length = 475
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+GASDDQI+ LP S +E GN + D C ICL + +R LPC H FH
Sbjct: 403 RGASDDQINSLPL-------SLVEGGNCS----DEPCNICLDCPAAGDSIRHLPCLHKFH 451
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
KC+D+WL + +CCP+CK +
Sbjct: 452 KKCIDRWLGMRTCCPICKSNV 472
>gi|226505342|ref|NP_001148879.1| protein binding protein [Zea mays]
gi|195622886|gb|ACG33273.1| protein binding protein [Zea mays]
Length = 268
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G SD+ IS L SW+YK +G + +C ICL+ ++ +E + LPC
Sbjct: 185 VGTEYRGLSDELISYLQSWKYK------SSGLFSRKTNHEDCPICLSTFRNRETMITLPC 238
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H CV +WL++ CP+CK EL
Sbjct: 239 RHHYHAACVTRWLKVNKTCPVCKYEL 264
>gi|145505561|ref|XP_001438747.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405919|emb|CAK71350.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 28/137 (20%)
Query: 172 GSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASD 231
G Q+ N H + +A++Y +L +G KG +
Sbjct: 219 GDQQQLENFHEYQDQEIDPDAMTYE-----------------QLLELEEQIGNVPKGLTK 261
Query: 232 DQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
QI +LP KR ++ +S P ++ C +CL ++KE+E+VR+LPC H++H C+
Sbjct: 262 QQIKQLP----KRTLNH----DSMPEDK---CSVCLFEFKEEEKVRELPCKHIYHSSCIK 310
Query: 292 QWLRILSCCPLCKQELE 308
WL+ CPLCK E+E
Sbjct: 311 NWLQNNKQCPLCKTEIE 327
>gi|119599264|gb|EAW78858.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|119599266|gb|EAW78860.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|119599268|gb|EAW78862.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|193786901|dbj|BAG52224.1| unnamed protein product [Homo sapiens]
Length = 262
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 50 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 109
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 110 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 157
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 158 TCPVCKQKV 166
>gi|255565501|ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
gi|223537045|gb|EEF38681.1| zinc finger protein, putative [Ricinus communis]
Length = 254
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP- 280
+G + KG + I LP + Y ++ + EC +CL +++EKE V+ +P
Sbjct: 101 VGGSRKGLDPEVIKSLPVYSYYHGEAKYQI----------ECAVCLGEFEEKETVKSIPY 150
Query: 281 CSHMFHLKCVDQWLRILSCCPLCK 304
C HMFHL+C++ WL++ CP+C+
Sbjct: 151 CKHMFHLECIETWLKLHVTCPVCR 174
>gi|213512162|ref|NP_001135282.1| ring finger protein 13 [Salmo salar]
gi|209155986|gb|ACI34225.1| RING finger protein 13 [Salmo salar]
Length = 380
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 169 HVVLMPDFSLPLEYYLIPFLITVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
+YK+ D C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKYKKGDVY------------DVCAICLDEYEDGDQLRVLPCSHAYHSKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|198454408|ref|XP_002137865.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132780|gb|EDY68423.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 890
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS++Y N E N + C +C+ ++ K+ +R LPCSH
Sbjct: 765 AKPRGLTRNEIDQLPSYKY-----NPEVHNG----DQTSCVVCMCDFELKQLLRVLPCSH 815
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 816 EFHAKCVDKWLRSNRTCPICR 836
>gi|383856916|ref|XP_003703952.1| PREDICTED: uncharacterized protein LOC100880939 [Megachile
rotundata]
Length = 625
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 228 GASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
GA+ + I S ++YKRV +E G A +C ICL+++++ E VR+LPC H+FH
Sbjct: 538 GATQESIESHTFRYKYKRV-KKVENGEDAIE----KCTICLSEFEDCESVRRLPCMHLFH 592
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
+ CVDQWL CP+C+ ++E
Sbjct: 593 IDCVDQWLCTNKRCPICRVDIE 614
>gi|189521454|ref|XP_001922708.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like [Danio rerio]
Length = 988
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ E A + + +C ICL+ +E E+VR+
Sbjct: 892 LGTVNRGASQGTIERCTYPHKYKKRKLHGKQEEEEGAEEDTEEKCTICLSILEEGEDVRR 951
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 952 LPCMHLFHQLCVDQWLLTNKKCPICRVDIE 981
>gi|325180789|emb|CCA15199.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 522
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 19/105 (18%)
Query: 223 GAADKGASDDQISRLPSWRYKR---------VDSNLEAGNSAPA---------NEDPECC 264
G+ +G S +++ +L +YK+ V N + S+ N D + C
Sbjct: 348 GSNTRGVSQERMQQLEILKYKKPVKSVDPACVHHNKDVSVSSHVGSIQIPICLNFDEDVC 407
Query: 265 -ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
ICL +++E+E VRKL C+H+FH+ C+D+WLR CP+CK +E
Sbjct: 408 PICLVEFEEEENVRKLNCTHIFHVPCIDEWLRRNVTCPMCKDIVE 452
>gi|401412029|ref|XP_003885462.1| Proteophosphoglycan ppg4, related [Neospora caninum Liverpool]
gi|325119881|emb|CBZ55434.1| Proteophosphoglycan ppg4, related [Neospora caninum Liverpool]
Length = 1822
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
++E C IC Y EE+R+LPC+H+FH C+D WLR CP+CK +L
Sbjct: 1767 SDEAKRCSICFEDYDHGEELRRLPCTHVFHKNCIDMWLRRSFVCPICKHDL 1817
>gi|38567912|emb|CAD41576.3| OSJNBa0088I22.8 [Oryza sativa Japonica Group]
gi|125591338|gb|EAZ31688.1| hypothetical protein OsJ_15836 [Oryza sativa Japonica Group]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 222 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 215 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 266
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL+I CP+C +E+
Sbjct: 267 CEHQYHQTCVTKWLKINKVCPVCNKEV 293
>gi|195054421|ref|XP_001994123.1| GH17353 [Drosophila grimshawi]
gi|193895993|gb|EDV94859.1| GH17353 [Drosophila grimshawi]
Length = 1665
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E +ED E C ICL+ ++ + +VR+LPC
Sbjct: 1563 NRGATLEIIERNTLPH-KYRRVRRPSET------DEDAEKCAICLSLFEIENDVRRLPCM 1615
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1616 HLFHTDCVDQWLVTNKHCPICRVDIE 1641
>gi|125549397|gb|EAY95219.1| hypothetical protein OsI_17037 [Oryza sativa Indica Group]
Length = 298
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 222 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 215 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 266
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL+I CP+C +E+
Sbjct: 267 CEHQYHQTCVTKWLKINKVCPVCNKEV 293
>gi|402594007|gb|EJW87934.1| hypothetical protein WUBG_01157 [Wuchereria bancrofti]
Length = 510
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L C+H+FH+
Sbjct: 426 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCNHVFHV 479
Query: 288 KCVDQWLRILSCCPLCKQELER 309
C+D+WL CP+C+ ++++
Sbjct: 480 VCIDRWLVYNKKCPVCRLDVDK 501
>gi|356562902|ref|XP_003549707.1| PREDICTED: uncharacterized protein LOC100783604 [Glycine max]
Length = 541
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+ LP +K+VD GN A +C ICLA Y+E +++R LPC H +H+ CVD+W
Sbjct: 457 VDSLPLKSHKKVDV-AHGGNDAE-----QCYICLADYEEGDQIRVLPCFHEYHMSCVDKW 510
Query: 294 LR-ILSCCPLCK 304
L+ I CPLC+
Sbjct: 511 LKEIHGVCPLCR 522
>gi|170587844|ref|XP_001898684.1| ring finger-H2 protein [Brugia malayi]
gi|158593954|gb|EDP32548.1| ring finger-H2 protein, putative [Brugia malayi]
Length = 488
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L C+H+FH+
Sbjct: 404 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCNHVFHV 457
Query: 288 KCVDQWLRILSCCPLCKQELER 309
C+D+WL CP+C+ ++++
Sbjct: 458 VCIDRWLVYNKKCPVCRLDVDK 479
>gi|429962863|gb|ELA42407.1| hypothetical protein VICG_00506 [Vittaforma corneae ATCC 50505]
Length = 248
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 53/262 (20%)
Query: 51 AMRISRASTWMTLELLALLVQ---ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLL 107
A RI+ S TL + L+ I F L I++ + P+++++ GY + C +
Sbjct: 17 ASRITAISCIRTLVVTDLIFHGARILFSIFVLYITRNDIVEEPLKVFLTGYILLCAAKAI 76
Query: 108 LLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 167
+ + + LP+ E+ + + FS+L+ C LF W+++G W+
Sbjct: 77 TFFSKNSAFFHIN----RLPEYEESNNGL-AVFSNLVEGCN----LF---WYILGYHWLQ 124
Query: 168 DSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV----PLISSVLGYNMNMG 223
S Q P L+ + L +SY P + +LL V P + +V+ +N
Sbjct: 125 QCENCS-QTHPLLYYTTVIWLILGFVSYILPLVAIVLLLILVSYVKPKLKTVVFHN---- 179
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
DS++ GNS C IC Y V+ LPC H
Sbjct: 180 ----------------------DSDIHDGNS-------RCVICYENYVPGSLVKFLPCDH 210
Query: 284 MFHLKCVDQWLRILSCCPLCKQ 305
FH +CVD+WL I CPLCK+
Sbjct: 211 HFHCECVDEWLNIRDTCPLCKK 232
>gi|225463026|ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263653 [Vitis vinifera]
Length = 542
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 248 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQ 305
N + ++A + ED +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 464 NHKKADTAQSGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRG 523
Query: 306 EL 307
++
Sbjct: 524 DV 525
>gi|307170860|gb|EFN62971.1| RING finger protein 165 [Camponotus floridanus]
Length = 709
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
MG + GA+ + I S +YKRV +E G A +C ICL+++++ E VR+LP
Sbjct: 616 MGHINCGATQESIESHTFPHKYKRV-KKVENGEDAIE----KCTICLSEFEDCESVRRLP 670
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQELE 308
C H+FH+ CVD+WL CP+C+ ++E
Sbjct: 671 CMHLFHIDCVDRWLCTNKRCPICRVDIE 698
>gi|406862594|gb|EKD15644.1| RING finger domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 365
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 256 PANEDPE-------CCICLAKYKEKEEVRKLPCSHMFHLKCVDQW-LRILSCCPLCKQEL 307
P E+PE C IC+A + E EEVR LPCSH FH CVD W L + CP+C+ EL
Sbjct: 169 PVKEEPEQRQPGFECAICIADFVENEEVRLLPCSHTFHPACVDPWLLNVSGTCPICRYEL 228
Query: 308 E 308
E
Sbjct: 229 E 229
>gi|194744417|ref|XP_001954691.1| GF16619 [Drosophila ananassae]
gi|190627728|gb|EDV43252.1| GF16619 [Drosophila ananassae]
Length = 1226
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 15/113 (13%)
Query: 201 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 256
L L + PL LG + +G ++GA+ + I R LP +Y+RV E
Sbjct: 1100 LHLEIGLATPL---SLGSRILIGPPRPNRGATLETIERNTLP-HKYRRVRRPSET----- 1150
Query: 257 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ED E C ICL ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1151 -DEDAEKCAICLTLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1202
>gi|147858550|emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]
Length = 542
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 248 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQ 305
N + ++A + ED +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 464 NHKKADTAQSGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRG 523
Query: 306 EL 307
++
Sbjct: 524 DV 525
>gi|405967974|gb|EKC33083.1| Protein regulator of cytokinesis 1 [Crassostrea gigas]
Length = 1813
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A KG + +I +LP++R+ + + + + ++ C +C+ ++ ++ +R LPCSH
Sbjct: 1729 AKPKGLTKPEIEQLPAYRFNKENHHSDMDQTS-------CVVCMCDFENRQLLRVLPCSH 1781
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WL+ CP+C+
Sbjct: 1782 EFHAKCVDKWLKTNRTCPICR 1802
>gi|198434521|ref|XP_002131882.1| PREDICTED: similar to Ring finger protein 44 [Ciona intestinalis]
Length = 765
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 34/156 (21%)
Query: 176 RAPNLHVLCISLLAWNA----------LSYSFPFL---LFLLLCCCVPLIS-----SVLG 217
AP+LH I + WN L++ P L +F PL++
Sbjct: 596 HAPSLHSHPIVMSPWNVPQVIPPLPQFLAFPLPTLPGFMFNPFMTFRPLLALDEDVDPTN 655
Query: 218 YNMNMGAADK-------GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 270
Y + A++ G S +I +L S+R+K G S+P + P C +C++++
Sbjct: 656 YEALINLAERLGEVKPQGLSKPRIDQLTSYRFK-------PGLSSP--DQPICVVCMSEW 706
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 306
+ K+ +R LPC H FH KCVD+WLR CP+C+ +
Sbjct: 707 EPKQLLRVLPCKHEFHAKCVDRWLRSNRTCPICRGD 742
>gi|297286655|ref|XP_001108379.2| PREDICTED: RING finger protein 13 [Macaca mulatta]
Length = 246
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 34 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 93
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 94 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 141
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 142 TCPVCKQKV 150
>gi|357625903|gb|EHJ76189.1| eIF2B-beta protein [Danaus plexippus]
Length = 1060
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + +I LPS++Y E C +C+ +++ ++ +R LPC+H
Sbjct: 978 AKPRGLARHEIDLLPSYKYSE---------QTHQGEQTSCVVCMCEFEARQTLRVLPCAH 1028
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 1029 EFHAKCVDKWLRSNRTCPICR 1049
>gi|195606966|gb|ACG25313.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 512
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
++ LP YK+++ AP D +C ICL +Y++ +++R LPC H FHL+CVD
Sbjct: 443 VNSLPCKSYKKLE--------APQRSDDMEQCHICLNEYEDGDQIRTLPCKHEFHLQCVD 494
Query: 292 QWLR-ILSCCPLCKQEL 307
+WL+ I CPLC+ ++
Sbjct: 495 KWLKEIHRVCPLCRGDV 511
>gi|147903607|ref|NP_001087624.1| E3 ubiquitin-protein ligase arkadia-C [Xenopus laevis]
gi|82198457|sp|Q66J97.1|R111C_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-C; AltName:
Full=RING finger protein 111-C
gi|51703448|gb|AAH81009.1| MGC81562 protein [Xenopus laevis]
Length = 967
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 863 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 922
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 923 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 960
>gi|224137078|ref|XP_002327016.1| predicted protein [Populus trichocarpa]
gi|222835331|gb|EEE73766.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
++ LP Y++ G A + +C ICL Y+E +++R LPCSH FH+ CVD+W
Sbjct: 351 VNSLPLKNYQK-----SPGTENVAQHEQQCHICLVDYEEGDKIRVLPCSHEFHMACVDKW 405
Query: 294 LR-ILSCCPLCKQEL 307
L+ I CPLC+ ++
Sbjct: 406 LKDIHGVCPLCRDDV 420
>gi|195444736|ref|XP_002070005.1| GK11818 [Drosophila willistoni]
gi|194166090|gb|EDW80991.1| GK11818 [Drosophila willistoni]
Length = 846
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G S ++I +LPS++Y N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 721 AKPRGLSRNEIDQLPSYKY-----NPEVHNG----DQTSCVVCMCDFELRQLLRVLPCSH 771
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 772 EFHAKCVDKWLRSNRTCPICR 792
>gi|326498937|dbj|BAK02454.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G +S LP Y++ E+G + A EC +CLA+ + +E R+LP C H+FH
Sbjct: 84 GLDASALSALPVTAYRK-----ESGAAPRA----ECAVCLAELADGDEARELPNCGHLFH 134
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
L+CVD WLR + CPLC+ E
Sbjct: 135 LECVDAWLRTRTTCPLCRAGAE 156
>gi|326488711|dbj|BAJ97967.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G +S LP Y++ E+G + A EC +CLA+ + +E R+LP C H+FH
Sbjct: 84 GLDASALSALPVTAYRK-----ESGAAPRA----ECAVCLAELADGDEARELPNCGHLFH 134
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
L+CVD WLR + CPLC+ E
Sbjct: 135 LECVDAWLRTRTTCPLCRAGAE 156
>gi|148234951|ref|NP_001090211.1| E3 ubiquitin-protein ligase arkadia-B [Xenopus laevis]
gi|82237141|sp|Q6NRV8.1|R111B_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-B; AltName:
Full=RING finger protein 111-B
gi|47124697|gb|AAH70603.1| Rnf111 protein [Xenopus laevis]
Length = 959
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 855 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEATEEDTEEKCTICLSIL 914
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 915 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 952
>gi|326679661|ref|XP_003201353.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Danio rerio]
Length = 750
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + +QI L + Y +V+ E G + C +C+ +Y + ++R+LPC+H FH
Sbjct: 672 RGLTKEQIDNLVTRTYGQVNLEGEQGRA--------CSVCINEYAQGNKLRRLPCAHEFH 723
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
+ C+D+WL + CP+C+Q +
Sbjct: 724 IHCIDRWLSENNTCPICRQPI 744
>gi|219127302|ref|XP_002183877.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404600|gb|EEC44546.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 317
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 213 SSVLGYNMNMGAA------DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANED--PECC 264
+++L +N G A G S +I RLP +R+ ++ P +E+ P C
Sbjct: 216 AALLRFNEESGPALESLLNHVGLSQQEIDRLP---LRRLSDPMDEVLRRPMSEEDLPLCT 272
Query: 265 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
ICL Y+ ++EVR +PC H FH C+D WLR + CP+CK
Sbjct: 273 ICLEPYRLEDEVRSIPCFHYFHKSCIDPWLRQKASCPICKH 313
>gi|157887047|emb|CAP03014.1| NEP1-interacting protein [Spinacia oleracea]
Length = 235
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
KG S D + ++P + + ++N +G E C +CL ++ E VR LP C H+F
Sbjct: 160 KGLSGDLVEKIPKIKITKNNNNDASG------ERVSCSVCLQDFQIGETVRSLPDCHHLF 213
Query: 286 HLKCVDQWLRILSCCPLCKQEL 307
HL C+D+WL + CPLC+++L
Sbjct: 214 HLPCIDKWLLKHASCPLCRRDL 235
>gi|28573149|ref|NP_731367.2| murashka, isoform C [Drosophila melanogaster]
gi|28381204|gb|AAF54394.4| murashka, isoform C [Drosophila melanogaster]
gi|317008637|gb|ADU79246.1| GH10160p [Drosophila melanogaster]
Length = 1173
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 1047 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 1097
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 1098 EFHAKCVDKWLRSNRTCPICR 1118
>gi|308505926|ref|XP_003115146.1| CRE-TOE-4 protein [Caenorhabditis remanei]
gi|308259328|gb|EFP03281.1| CRE-TOE-4 protein [Caenorhabditis remanei]
Length = 503
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 39/51 (76%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
ED C +CL+ +++ E +RKLPC+H+FH +C+ +WL I CP+C+++++R
Sbjct: 446 EDDTCTVCLSNFEDGESIRKLPCNHVFHPECIYKWLDINKKCPMCREDIDR 496
>gi|242045404|ref|XP_002460573.1| hypothetical protein SORBIDRAFT_02g031050 [Sorghum bicolor]
gi|241923950|gb|EER97094.1| hypothetical protein SORBIDRAFT_02g031050 [Sorghum bicolor]
Length = 324
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G ++G S D ++ LPS YK D ++ GN+ +C IC + +E E + LPC
Sbjct: 239 VGTENRGLSADTLASLPSVTYKMQD--VQDGNTE------QCVICRVELEEGESLIALPC 290
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H++H +C++QWL+I CP+C E+
Sbjct: 291 KHLYHPECINQWLQINKVCPMCSAEV 316
>gi|195395880|ref|XP_002056562.1| GJ11010 [Drosophila virilis]
gi|194143271|gb|EDW59674.1| GJ11010 [Drosophila virilis]
Length = 1477
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E +ED E C ICL+ ++ + +VR+LPC
Sbjct: 1369 NRGATLEIIERNTLPH-KYRRVRRPSET------DEDAEKCAICLSLFEIENDVRRLPCM 1421
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1422 HLFHTDCVDQWLVTNKHCPICRVDIE 1447
>gi|442618623|ref|NP_001262484.1| CG6923, isoform D [Drosophila melanogaster]
gi|440217328|gb|AGB95866.1| CG6923, isoform D [Drosophila melanogaster]
Length = 1265
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E +ED E C ICL ++ + EVR+LPC
Sbjct: 1154 NRGATLETIERNTLP-HKYRRVRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1206
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1207 HLFHTDCVDQWLVTNKHCPICRVDIE 1232
>gi|298705326|emb|CBJ49016.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1372
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 255 APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
A A +C ICL ++E + +RKLPC H FH KCVD+WL + CPLCK+
Sbjct: 1172 AEAASSADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKR 1222
>gi|21356709|ref|NP_650112.1| CG6923, isoform A [Drosophila melanogaster]
gi|24646071|ref|NP_731623.1| CG6923, isoform B [Drosophila melanogaster]
gi|386765608|ref|NP_001247056.1| CG6923, isoform C [Drosophila melanogaster]
gi|7299505|gb|AAF54693.1| CG6923, isoform A [Drosophila melanogaster]
gi|16197957|gb|AAL13749.1| LD22771p [Drosophila melanogaster]
gi|23171037|gb|AAN13524.1| CG6923, isoform B [Drosophila melanogaster]
gi|211938579|gb|ACJ13186.1| FI06048p [Drosophila melanogaster]
gi|220947268|gb|ACL86177.1| CG6923-PA [synthetic construct]
gi|220956714|gb|ACL90900.1| CG6923-PA [synthetic construct]
gi|383292652|gb|AFH06374.1| CG6923, isoform C [Drosophila melanogaster]
Length = 1256
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E +ED E C ICL ++ + EVR+LPC
Sbjct: 1154 NRGATLETIERNTLP-HKYRRVRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1206
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1207 HLFHTDCVDQWLVTNKHCPICRVDIE 1232
>gi|357159651|ref|XP_003578515.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 337
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D ++ LPS YK D ++ GN+ +C IC +++E E + LPC
Sbjct: 252 VGTESRGLSADTLASLPSVTYKTKD--VQDGNTE------QCVICRVEFEEGESLVALPC 303
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H C++QWL+I CP+C E+
Sbjct: 304 KHSYHPDCINQWLQINKVCPMCSAEV 329
>gi|195539967|gb|AAI67972.1| Unknown (protein for IMAGE:7068139) [Danio rerio]
Length = 711
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + +QI L + Y +V+ E G + C +C+ +Y + ++R+LPC+H FH
Sbjct: 633 RGLTKEQIDNLVTRTYGQVNLEGEQGRA--------CSVCINEYAQGNKLRRLPCAHEFH 684
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
+ C+D+WL + CP+C+Q +
Sbjct: 685 IHCIDRWLSENNTCPICRQPI 705
>gi|51092240|gb|AAT94533.1| AT15166p [Drosophila melanogaster]
Length = 1256
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E +ED E C ICL ++ + EVR+LPC
Sbjct: 1154 NRGATLETIERNTLP-HKYRRVRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1206
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1207 HLFHTDCVDQWLVTNKHCPICRVDIE 1232
>gi|413948218|gb|AFW80867.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 200 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECLICLEEFHVGNEVRG 248
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 249 LPCAHNFHVECIDQWLRLNVKCPRCR 274
>gi|26339148|dbj|BAC33245.1| unnamed protein product [Mus musculus]
Length = 981
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|26331328|dbj|BAC29394.1| unnamed protein product [Mus musculus]
Length = 981
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|47125046|gb|AAH69835.1| Rnf111 protein [Mus musculus]
Length = 981
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|308081112|ref|NP_001183423.1| uncharacterized protein LOC100501846 [Zea mays]
gi|238011374|gb|ACR36722.1| unknown [Zea mays]
Length = 505
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
++ LP YK+++ AP D +C ICL +Y++ +++R LPC H FHL+CVD
Sbjct: 432 VNSLPCKSYKKLE--------APQRSDDMEQCHICLTEYEDGDQIRILPCKHEFHLQCVD 483
Query: 292 QWLR-ILSCCPLCKQEL 307
+WL+ I CPLC+ ++
Sbjct: 484 KWLKEIHRVCPLCRGDV 500
>gi|74000295|ref|XP_535498.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Canis
lupus familiaris]
Length = 985
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|413924199|gb|AFW64131.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 513
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
++ LP YK+++ AP D +C ICL +Y++ +++R LPC H FHL+CVD
Sbjct: 440 VNSLPCKSYKKLE--------APQRSDDMEQCHICLTEYEDGDQIRILPCKHEFHLQCVD 491
Query: 292 QWLR-ILSCCPLCKQEL 307
+WL+ I CPLC+ ++
Sbjct: 492 KWLKEIHRVCPLCRGDV 508
>gi|301782361|ref|XP_002926594.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like isoform 1
[Ailuropoda melanoleuca]
Length = 985
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|126277147|ref|XP_001368075.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 1
[Monodelphis domestica]
Length = 982
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 886 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 945
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 946 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 975
>gi|115460008|ref|NP_001053604.1| Os04g0571200 [Oryza sativa Japonica Group]
gi|113565175|dbj|BAF15518.1| Os04g0571200, partial [Oryza sativa Japonica Group]
Length = 290
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 222 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 207 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 258
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL+I CP+C +E+
Sbjct: 259 CEHQYHQTCVTKWLKINKVCPVCNKEV 285
>gi|410961151|ref|XP_003987148.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Felis
catus]
Length = 985
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|197100103|ref|NP_001124565.1| E3 ubiquitin-protein ligase Arkadia [Pongo abelii]
gi|75070423|sp|Q5R476.1|RN111_PONAB RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|55733525|emb|CAH93440.1| hypothetical protein [Pongo abelii]
Length = 986
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|395502785|ref|XP_003755756.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sarcophilus
harrisii]
Length = 981
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|356571242|ref|XP_003553788.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
max]
Length = 506
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 171 FGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 230
F +Q AP H L + S P ++F++ C + G + AA + +
Sbjct: 350 FFDYQTAPPQHGL--RVFGIITSSIVGPAIIFVIAIACYASLKYRRGNTARIAAAQR-SE 406
Query: 231 DDQISRLPSWRYKRVD-SNLEA------GNS--APANEDPECCICLAKYKEKEEVRKLP- 280
IS PS +D S +E+ G S P D C ICL++YK K+ +R +P
Sbjct: 407 PSAISPQPSIATMGLDDSTIESYQKLVLGESRRVPGPNDGCCTICLSEYKTKDTIRCIPE 466
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQ 305
C+H FH +C+D+WLR+ S CP+C+
Sbjct: 467 CAHCFHAECIDEWLRMNSTCPVCRN 491
>gi|344293339|ref|XP_003418381.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Loxodonta africana]
Length = 984
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSVLEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|291402920|ref|XP_002718253.1| PREDICTED: ring finger protein 111 isoform 1 [Oryctolagus
cuniculus]
Length = 984
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|116310277|emb|CAH67282.1| OSIGBa0111L12.9 [Oryza sativa Indica Group]
Length = 254
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 222 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 171 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 222
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL+I CP+C +E+
Sbjct: 223 CEHQYHQTCVTKWLKINKVCPVCNKEV 249
>gi|354465242|ref|XP_003495089.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2
[Cricetulus griseus]
Length = 982
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 886 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSVLEEGEDVRR 945
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 946 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 975
>gi|335279598|ref|XP_003353382.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 984
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|326525757|dbj|BAJ88925.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 346
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D ++ LPS YK D ++ GN+ +C IC +++E E + LPC
Sbjct: 261 VGTESRGLSADTLASLPSVTYKTKD--MQDGNT------EQCVICRVEFEEGESLVALPC 312
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
+H +H C++QWL+I CP+C E+
Sbjct: 313 NHSYHPDCINQWLQINKVCPMCSAEV 338
>gi|215701052|dbj|BAG92476.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 254
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 222 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 171 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 222
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL+I CP+C +E+
Sbjct: 223 CEHQYHQTCVTKWLKINKVCPVCNKEV 249
>gi|355716731|gb|AES05704.1| ring finger protein 111 [Mustela putorius furo]
Length = 992
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|194206605|ref|XP_001500178.2| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 2 [Equus
caballus]
Length = 985
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|308808894|ref|XP_003081757.1| FOG: Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
gi|116060223|emb|CAL56282.1| FOG: Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
Length = 213
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 223 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 281
G AD+GAS +++ LPS ++R + ++A D C +CL + + E V+ LP C
Sbjct: 117 GEADRGASAVKVAELPSRTFRRSEGGVDA-------IDGMCAVCLDVFLDGEMVKTLPSC 169
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQ 305
+H FH C+D+WL CCP+C++
Sbjct: 170 AHEFHEACIDRWLLRRDCCPICRR 193
>gi|410961147|ref|XP_003987146.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Felis
catus]
Length = 994
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 898 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 957
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 958 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|332235794|ref|XP_003267089.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Nomascus
leucogenys]
Length = 986
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|159463100|ref|XP_001689780.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283768|gb|EDP09518.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1408
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
KGA ++Q++ LP+ D+ + APA C +C+ E V+++PC+H FH
Sbjct: 566 KGAKEEQLAALPT-EVLTADNPRRRSDGAPAT----CAVCMEDLVAGETVKRIPCAHEFH 620
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
C+DQWLR + CP+C+ ++
Sbjct: 621 ENCIDQWLRTKANCPICQPQV 641
>gi|426233214|ref|XP_004010612.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Ovis
aries]
Length = 986
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|114657299|ref|XP_510446.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 8 [Pan
troglodytes]
gi|410221200|gb|JAA07819.1| ring finger protein 111 [Pan troglodytes]
gi|410252214|gb|JAA14074.1| ring finger protein 111 [Pan troglodytes]
gi|410306404|gb|JAA31802.1| ring finger protein 111 [Pan troglodytes]
Length = 986
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|31874557|emb|CAD98031.1| hypothetical protein [Homo sapiens]
Length = 986
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + G + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGGEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|335279602|ref|XP_003353383.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 993
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|168029222|ref|XP_001767125.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681621|gb|EDQ68046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPAN------------EDPECCICLAKYKEKEEVR 277
SD ISRLP YKR S + A + + E+ C +CL + E E +R
Sbjct: 164 SDTDISRLPVRVYKR-SSQIPAADQSQLRYDKIVQGEQKTLEELTCSVCLEQVVEGEIIR 222
Query: 278 KLPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC H FH C+D WLR + CP+CK
Sbjct: 223 TLPCVHQFHAACIDLWLRQQATCPVCK 249
>gi|118352226|ref|XP_001009386.1| RING finger protein [Tetrahymena thermophila]
gi|89291153|gb|EAR89141.1| RING finger protein [Tetrahymena thermophila SB210]
Length = 1202
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C ICL + E E+V++L C H FH+ CVD WL+I CPLC+Q L
Sbjct: 1137 CAICLNDFDEGEKVKELNCEHRFHISCVDDWLKIKGSCPLCRQNL 1181
>gi|357117891|ref|XP_003560695.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 315
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE-------AGNS-APANEDPECCICLA 268
G+ +G+ D G S D I+ LP++ Y+ + + AG+S + E EC +CL
Sbjct: 70 GHGALLGSDDLGLSMDDITALPTFTYRSRAAPMTPQSLSRCAGSSRSKGREAVECVVCLQ 129
Query: 269 KYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
+ + + VR LP C H FH C+D WLR S CP+C+
Sbjct: 130 ELVDGDVVRVLPACKHFFHGGCIDVWLRTRSSCPVCR 166
>gi|281204915|gb|EFA79109.1| hypothetical protein PPL_07934 [Polysphondylium pallidum PN500]
Length = 628
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 220 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
++ +KGA+ I LP + ++ ++ +E CCICL++ + EEV+ L
Sbjct: 551 LDENVNNKGANIQSIKTLPIRKIEK-NTKIET-----------CCICLSQMEVNEEVKTL 598
Query: 280 PCSHMFHLKCVDQWLRILSCCPLCKQEL 307
PC H FH+ C+DQWL++ CP+ KQ +
Sbjct: 599 PCLHFFHIDCIDQWLKVNKICPIDKQSI 626
>gi|242050126|ref|XP_002462807.1| hypothetical protein SORBIDRAFT_02g032320 [Sorghum bicolor]
gi|241926184|gb|EER99328.1| hypothetical protein SORBIDRAFT_02g032320 [Sorghum bicolor]
Length = 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
KG D + +LP+ + EA +E PEC ICLA++ +EVR LP C H F
Sbjct: 90 KGIEKDALEKLPTVPF-------EAAGHDDVDERPECAICLAEFARGDEVRVLPPCGHAF 142
Query: 286 HLKCVDQWLRILSCCPLCKQEL 307
H CVD WL S CP C+ L
Sbjct: 143 HAACVDTWLLCTSTCPSCRTAL 164
>gi|224109496|ref|XP_002315216.1| predicted protein [Populus trichocarpa]
gi|222864256|gb|EEF01387.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 223 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCS 282
G + G+S Q S S K+ D+ G+ ++++ C +CL + E +R LPC
Sbjct: 174 GPQNGGSSMQQASSSVSAEQKKQDTGNAIGSMKSSDDELTCSVCLEQVSMGEVIRTLPCL 233
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H FH C+D WLR CP+CK
Sbjct: 234 HQFHANCIDPWLRQQGTCPVCK 255
>gi|410918361|ref|XP_003972654.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 467
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +PS+++ + + +E C +C+ ++ ++ +R LPCSH
Sbjct: 390 AKPRGLTKADIEHIPSYKFNSNNHH---------SEQTMCVVCMCDFESRQLLRVLPCSH 440
Query: 284 MFHLKCVDQWLRILSCCPLCKQELER 309
FH KCVD+WL+ CP+C+ E++R
Sbjct: 441 EFHAKCVDKWLKANRTCPICRAEVQR 466
>gi|390355526|ref|XP_790205.3| PREDICTED: uncharacterized protein LOC585279 isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G S I +LPS+RY N E + N+ C +C++ ++ ++ +R LPCSH
Sbjct: 408 AKPRGLSKANIDQLPSYRY-----NPETPRTI--NDQTCCVVCMSDFETRQTLRVLPCSH 460
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH +CVD+WL+ CP+C+ +
Sbjct: 461 EFHARCVDKWLKSNRTCPICRAD 483
>gi|4959044|gb|AAD34209.1|AF069992_1 LIM domain interacting RING finger protein [Mus musculus]
Length = 600
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E +++RKLPCSH FH+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGDKLRKLPCSHEFHVHCIDRWLSENSTCPICRR 588
>gi|170061533|ref|XP_001866274.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879738|gb|EDS43121.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 327
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 225 ADKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPC 281
++GA+ + I P +YKR+ E +ED E C ICL+++ +E+VR+LPC
Sbjct: 240 TNRGATQEMIEHNTFPH-KYKRLRRASET------DEDSEKCTICLSQFIPQEDVRRLPC 292
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 293 MHLFHKDCVDQWLVTNKHCPICRVDIE 319
>gi|195112014|ref|XP_002000571.1| GI22448 [Drosophila mojavensis]
gi|193917165|gb|EDW16032.1| GI22448 [Drosophila mojavensis]
Length = 1503
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+RV E+ +ED E C ICL+ ++ + +VR+LPC
Sbjct: 1396 NRGATLEIIERNTLP-HKYRRVRRPSES------DEDAEKCAICLSLFEIENDVRRLPCM 1448
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1449 HLFHTDCVDQWLVTNKHCPICRVDIE 1474
>gi|326533810|dbj|BAK05436.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 34/155 (21%)
Query: 163 NVWVF--DSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS------- 213
N W+F +SR+ + R L + LS++ L FLL S
Sbjct: 5 NSWLFADNSRYSTRAR-----------LVFMGLSFAIGILTFLLYLAIWYTCSRRSRRQR 53
Query: 214 SVLGYNMNMGAA---DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 270
+ ++ GAA ++G SD I+ LP++ Y++ D + +C +CL +
Sbjct: 54 GPVADDLESGAAAGTERGMSDAAIAALPTFLYEQPDDDAAV----------DCAVCLGQL 103
Query: 271 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
+ E+ R+LP C+H+FH +CVD WLR CP+C+
Sbjct: 104 EAGEKARRLPKCAHLFHAECVDAWLRAHCTCPMCR 138
>gi|422294236|gb|EKU21536.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
gi|422294277|gb|EKU21577.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
Length = 502
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
S + +RLP Y +SNL ECCICL ++ + VRKLPC H++H +C
Sbjct: 237 SPQEKARLPIAPYDPGESNLYNFR--------ECCICLTDFERTDLVRKLPCGHVYHSEC 288
Query: 290 VDQWLRILSCCPLCKQEL 307
VD W + S CPLCK ++
Sbjct: 289 VDCWFSVNSVCPLCKSDV 306
>gi|356506304|ref|XP_003521925.1| PREDICTED: uncharacterized protein LOC100810553 [Glycine max]
Length = 397
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 259 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
E +C ICLA+YKEKE +R +P C H FHL C+D WLR S CP+C+ L+
Sbjct: 291 ETTQCVICLAEYKEKELLRIIPKCGHTFHLSCIDMWLRKQSTCPVCRLSLQ 341
>gi|414590063|tpg|DAA40634.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 323
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G ++G S D ++ LPS YK +++ GN+ +C IC + +E E + LPC
Sbjct: 238 VGTENRGLSADALASLPSVTYKM--QSVQDGNTE------QCVICRVELEEGESLIALPC 289
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H++H +C++QWL+I CP+C E+
Sbjct: 290 KHLYHPECINQWLQINKVCPMCSAEV 315
>gi|410909057|ref|XP_003968007.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Takifugu
rubripes]
Length = 519
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 441 RGLTKEQIDNLATRTYGQASLEGEIGRA--------CSVCINEYAQGNKLRRLPCSHEFH 492
Query: 287 LKCVDQWLRILSCCPLCKQ 305
+ C+D+WL + CP+C+Q
Sbjct: 493 IHCIDRWLSENNTCPICRQ 511
>gi|195329748|ref|XP_002031572.1| GM26076 [Drosophila sechellia]
gi|194120515|gb|EDW42558.1| GM26076 [Drosophila sechellia]
Length = 1257
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 226 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 282
++GA+ + I R LP +Y+R+ E +ED E C ICL ++ + EVR+LPC
Sbjct: 1152 NRGATLETIERNTLP-HKYRRIRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1204
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 1205 HLFHTDCVDQWLVTNKHCPICRVDIE 1230
>gi|347969289|ref|XP_003436399.1| AGAP013357-PA [Anopheles gambiae str. PEST]
gi|333468455|gb|EGK96956.1| AGAP013357-PA [Anopheles gambiae str. PEST]
Length = 2020
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 220 MNMGAADKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEV 276
M +GAS + I P +YKR+ ++ +ED E C ICL++++ +V
Sbjct: 1840 MEDSCTSRGASQEMIETHTFPH-KYKRLR------RASETDEDSEKCTICLSQFEIDNDV 1892
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
R+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1893 RRLPCMHLFHKDCVDQWLVTNKHCPICRVDIE 1924
>gi|357507109|ref|XP_003623843.1| RING finger protein [Medicago truncatula]
gi|124360239|gb|ABN08252.1| Zinc finger, RING-type [Medicago truncatula]
gi|124360861|gb|ABN08833.1| Zinc finger, RING-type [Medicago truncatula]
gi|355498858|gb|AES80061.1| RING finger protein [Medicago truncatula]
gi|388496154|gb|AFK36143.1| unknown [Medicago truncatula]
Length = 190
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G I +P+ ++ N EA + A ED +C ICLA YKE+E +R +P C H
Sbjct: 61 DPGTEPVLIEAIPTLKF-----NQEAFS---AIEDTQCVICLADYKEREILRIMPKCGHT 112
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FHL C+D WLR S CP+C+
Sbjct: 113 FHLSCIDIWLRKQSTCPVCR 132
>gi|357142455|ref|XP_003572578.1| PREDICTED: RING-H2 finger protein ATL10-like [Brachypodium
distachyon]
Length = 287
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 256 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
PA E+ +C +CL +Y+ K+ VR LP C H FH+ C+D WL+ S CP+C+ +
Sbjct: 96 PAQEESQCTVCLEEYEAKDVVRVLPFCGHAFHVACIDAWLKQQSTCPICRASM 148
>gi|359486069|ref|XP_002272258.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 282
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
DP C +C +Y+ EEVR++PC HM+H C+ WLRI + CP+C+ ELE
Sbjct: 200 DPCCPVCKEEYQAGEEVREMPCKHMYHSDCIVPWLRIHNSCPVCRHELE 248
>gi|147765316|emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]
Length = 915
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Query: 200 LLFLLLC------CCVPLISSVLGYNMNMGAADK------GASDDQISRLPSWRYKRVDS 247
L FLLL VP S + N+ D+ G + LP +R+ S
Sbjct: 552 LTFLLLAYAKFCHVAVPDFSDFDNHQQNLHGIDRERLRSSGIDKRVMESLPFFRF----S 607
Query: 248 NLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQE 306
+L+ + E EC +CL+K++E E +R LP C H FH+ C+DQWL S CPLC+ +
Sbjct: 608 SLKG-----SKEGLECAVCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSSCPLCRYK 662
Query: 307 LE 308
+
Sbjct: 663 FD 664
>gi|432930094|ref|XP_004081317.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oryzias latipes]
Length = 724
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 646 RGLTKEQIDNLSTRTYSQASLEGEIGRA--------CSVCINEYAQGNKLRRLPCSHEFH 697
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
+ C+D+WL + CP+C+Q +
Sbjct: 698 IHCIDRWLSENNTCPICRQPI 718
>gi|317419922|emb|CBN81958.1| RING finger protein 6, partial [Dicentrarchus labrax]
Length = 283
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 205 RGLTKEQIDNLSTRTYGQASLEGEMGRA--------CSVCINEYAQGNKLRRLPCSHEFH 256
Query: 287 LKCVDQWLRILSCCPLCKQ 305
+ C+D+WL + CP+C+Q
Sbjct: 257 IHCIDRWLSENNTCPICRQ 275
>gi|390355528|ref|XP_003728567.1| PREDICTED: uncharacterized protein LOC585279 isoform 1
[Strongylocentrotus purpuratus]
Length = 514
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G S I +LPS+RY N E + N+ C +C++ ++ ++ +R LPCSH
Sbjct: 430 AKPRGLSKANIDQLPSYRY-----NPETPRTI--NDQTCCVVCMSDFETRQTLRVLPCSH 482
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH +CVD+WL+ CP+C+ +
Sbjct: 483 EFHARCVDKWLKSNRTCPICRAD 505
>gi|242057653|ref|XP_002457972.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
gi|241929947|gb|EES03092.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
Length = 374
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 200 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 248
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 249 LPCAHNFHVECIDQWLRLNVKCPRCR 274
>gi|405967730|gb|EKC32861.1| E3 ubiquitin-protein ligase arkadia-B [Crassostrea gigas]
Length = 735
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL++++ +E+VR+LPC H+FH+ CVDQWL CP+C+ ++E
Sbjct: 679 KCTICLSEFEIEEDVRRLPCMHLFHIPCVDQWLTTNKKCPICRVDIE 725
>gi|356542379|ref|XP_003539644.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Glycine max]
Length = 274
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 243 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
K+ EAG P +E C ICL + K E VR LPC H FH C+D WLR CP+
Sbjct: 193 KQESGGTEAGTGGPEDE-LTCTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPV 251
Query: 303 CK 304
CK
Sbjct: 252 CK 253
>gi|47223363|emb|CAG04224.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 270 RGLTKEQIDNLATRTYGQASLEGEMGRA--------CSVCINEYAQGNKLRRLPCSHEFH 321
Query: 287 LKCVDQWLRILSCCPLCKQ 305
+ C+D+WL + CP+C+Q
Sbjct: 322 IHCIDRWLSENNTCPICRQ 340
>gi|359476036|ref|XP_002281341.2| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
Length = 413
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Query: 200 LLFLLLC------CCVPLISSVLGYNMNMGAADK------GASDDQISRLPSWRYKRVDS 247
L FLLL VP S + N+ D+ G + LP +R+ S
Sbjct: 50 LTFLLLAYAKFCHVAVPDFSDFDNHQQNLHGLDRERLRSSGIDKRVMESLPFFRF----S 105
Query: 248 NLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQE 306
+L+ + E EC +CL+K++E E +R LP C H FH+ C+DQWL S CPLC+ +
Sbjct: 106 SLKG-----SKEGLECAVCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSSCPLCRYK 160
Query: 307 LE 308
+
Sbjct: 161 FD 162
>gi|224133604|ref|XP_002327636.1| predicted protein [Populus trichocarpa]
gi|222836721|gb|EEE75114.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
KG D + ++P R ++ E+G E C +CL ++ E VR LP C
Sbjct: 146 GGSKGLPGDSLEKIPKIRITSNNNVDESG------EKVSCSVCLQDFQLGETVRSLPHCH 199
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D+WL + CPLC+++L
Sbjct: 200 HMFHLPCIDKWLLRHASCPLCRRDL 224
>gi|218196079|gb|EEC78506.1| hypothetical protein OsI_18434 [Oryza sativa Indica Group]
Length = 394
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 211 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 259
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 260 LPCAHNFHVECIDQWLRLNVKCPRCR 285
>gi|298204569|emb|CBI23844.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
DP C +C +Y+ EEVR++PC HM+H C+ WLRI + CP+C+ ELE
Sbjct: 200 DPCCPVCKEEYQAGEEVREMPCKHMYHSDCIVPWLRIHNSCPVCRHELE 248
>gi|115462059|ref|NP_001054629.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|51038194|gb|AAT93997.1| unknow protein [Oryza sativa Japonica Group]
gi|113578180|dbj|BAF16543.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|215706903|dbj|BAG93363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630174|gb|EEE62306.1| hypothetical protein OsJ_17095 [Oryza sativa Japonica Group]
Length = 386
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 201 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 249
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 250 LPCAHNFHVECIDQWLRLNVKCPRCR 275
>gi|268569244|ref|XP_002640470.1| Hypothetical protein CBG13603 [Caenorhabditis briggsae]
Length = 502
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
ED C +CL ++ E +RKLPC+H+FH +C+ +WL I CP+C++E++R
Sbjct: 433 EDDTCTVCLNNFEAGESIRKLPCNHLFHPECIYKWLDINKKCPMCREEIDR 483
>gi|297846582|ref|XP_002891172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337014|gb|EFH67431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 173 SFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV--------PLISSVLGYNMNMGA 224
S QR + + I +L + LLF L CCV P +S G
Sbjct: 38 SAQRPKQIPAVIIGMLMFT--------LLFSLFACCVCFKYTSTSPHGTSSDTEEGGHGE 89
Query: 225 ------ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G D I+ PS+ Y +V L+ G EC ICL +++++E +R
Sbjct: 90 VAFTRRTSRGLGKDVITSFPSFLYSQV-KGLKIGKGGV-----ECAICLNEFEDEETLRL 143
Query: 279 LP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+P CSH+FH C+D WL S CP+C+ L
Sbjct: 144 MPPCSHVFHASCIDVWLSSRSTCPVCRASL 173
>gi|357127651|ref|XP_003565492.1| PREDICTED: RING-H2 finger protein ATL1-like [Brachypodium
distachyon]
Length = 219
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G +S LP Y++ +S A + D C +CL++ + ++VR+LP C H+F
Sbjct: 82 RGLDASALSALPVTAYRKKESAAGASAGGGPDSD--CAVCLSELTDGDKVRELPNCGHVF 139
Query: 286 HLKCVDQWLRILSCCPLCKQELE 308
H+ CVD WLR + CPLC+ E E
Sbjct: 140 HVDCVDAWLRSTTTCPLCRAEAE 162
>gi|118404362|ref|NP_001072805.1| E3 ubiquitin-protein ligase arkadia [Xenopus (Silurana) tropicalis]
gi|123914777|sp|Q0V9R0.1|RN111_XENTR RecName: Full=E3 ubiquitin-protein ligase arkadia; AltName:
Full=RING finger protein 111
gi|111305672|gb|AAI21429.1| ring finger protein 111 [Xenopus (Silurana) tropicalis]
Length = 954
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +Y++V ++ + + +D +C ICL+
Sbjct: 850 LGNVNRGASQGTIERCTYPHKYEKVSTDWFSQRKLHSKQDGEEATEEDTEEKCTICLSIL 909
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 910 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 947
>gi|326926532|ref|XP_003209453.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like [Meleagris
gallopavo]
Length = 985
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GA+ I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGATQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|413953138|gb|AFW85787.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 187
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 193 LSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS-WRYKRVDSNLEA 251
+S SFPFL L +P+ + L + G A+ G IS LP+ + YKR
Sbjct: 74 ISRSFPFLH--LSTRALPVAAGRLFWPA--GTAEPGMDAAAISSLPAAFGYKR------- 122
Query: 252 GNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
PA +C ICL E VR+LP C H+FH C+DQWLR + C LC+ +
Sbjct: 123 -EHHPATGWAQCAICLGLVAIGEAVRRLPTCGHLFHAGCIDQWLRAHATCSLCRAAV 178
>gi|315075292|ref|NP_001186680.1| E3 ubiquitin-protein ligase Arkadia [Gallus gallus]
Length = 985
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GA+ I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGATQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|224062385|ref|XP_002196878.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Taeniopygia
guttata]
Length = 985
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GA+ I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGATQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|194746673|ref|XP_001955801.1| GF16054 [Drosophila ananassae]
gi|190628838|gb|EDV44362.1| GF16054 [Drosophila ananassae]
Length = 854
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS++Y + ++ G+ + C +C+ ++ ++ +R LPCSH
Sbjct: 725 AKPRGLTRNEIDQLPSYKY---NPDVHNGDQS------SCVVCMCDFELRQLLRVLPCSH 775
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 776 EFHAKCVDKWLRSNRTCPICR 796
>gi|443723425|gb|ELU11856.1| hypothetical protein CAPTEDRAFT_219920, partial [Capitella teleta]
Length = 265
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 7/79 (8%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 285
+KG D +I LP+ Y + S L+ N C ICL+++++KEEVR+LPC H +
Sbjct: 185 NKGLQDGEIECLPTSNYFKPTS-LDDDNLL------TCKICLSEFEDKEEVRRLPCLHQY 237
Query: 286 HLKCVDQWLRILSCCPLCK 304
H C+D+WLR+ + CP C+
Sbjct: 238 HTACIDEWLRMKAQCPTCR 256
>gi|115435248|ref|NP_001042382.1| Os01g0213400 [Oryza sativa Japonica Group]
gi|14164470|dbj|BAB55721.1| ring-H2 zinc finger protein-like [Oryza sativa Japonica Group]
gi|113531913|dbj|BAF04296.1| Os01g0213400 [Oryza sativa Japonica Group]
gi|125569502|gb|EAZ11017.1| hypothetical protein OsJ_00862 [Oryza sativa Japonica Group]
gi|215695552|dbj|BAG90743.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 237
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 256 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
P +C +CL++ + E+VR+LP C H+FH++CVD WLR + CPLC+ E E
Sbjct: 122 PGATAADCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAEAE 175
>gi|444730977|gb|ELW71346.1| E3 ubiquitin-protein ligase Arkadia [Tupaia chinensis]
Length = 961
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 195 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP-SWRYKRVDSN----- 248
Y P L L +PL+ ++ +G ++GAS I R +YK+V ++
Sbjct: 831 YHAPPRLHHLQLGALPLME-LIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQR 889
Query: 249 -----LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
+ + + +C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C
Sbjct: 890 KLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPIC 949
Query: 304 KQELE 308
+ ++E
Sbjct: 950 RVDIE 954
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 15/86 (17%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAKYKEKEEVRKLP 280
A +G S +I LPS+RY P N + C +C+ ++ ++ +R LP
Sbjct: 940 AKPRGMSKAKIEDLPSYRYN------------PDNHQSQQTLCVVCMCDFENRQLLRVLP 987
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQE 306
C+H FH KCVD+WL+ CP+C+ +
Sbjct: 988 CNHEFHAKCVDKWLKSNRTCPICRAD 1013
>gi|225468578|ref|XP_002263471.1| PREDICTED: NEP1-interacting protein 1 [Vitis vinifera]
gi|296084057|emb|CBI24445.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 220 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
+ G A KG D + ++P D+N +A + E C +CL ++ E VR L
Sbjct: 154 FDTGGA-KGLPGDSVEKIPKITITS-DNNGDA-----SGEKVSCSVCLQDFQLGETVRSL 206
Query: 280 P-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
P C HMFHL C+D+WL CPLC+++L
Sbjct: 207 PHCHHMFHLPCIDKWLLGHGSCPLCRRDL 235
>gi|407920977|gb|EKG14150.1| Zinc finger RING-type protein [Macrophomina phaseolina MS6]
Length = 585
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP----ECCIC 266
+IS ++ N G A AS + I+ LP R R + AG+S P D EC IC
Sbjct: 277 VISQLMEQNA-TGNAPGPASAEAIAALPKKRVTR--QMVGAGDSPPDFPDDQLHGECSIC 333
Query: 267 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
+ + EEV +LPC H FH +C++ WLR CP C++ +E+
Sbjct: 334 MDEVPIGEEVTELPCGHWFHGQCIEAWLREHDTCPHCRKGIEK 376
>gi|224113387|ref|XP_002316478.1| predicted protein [Populus trichocarpa]
gi|222865518|gb|EEF02649.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 170 RFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADK-- 227
RFG F + + +S +A L+Y F C PL + ++ ++ D+
Sbjct: 13 RFGGFALTFGISMGVLSAIAIAILAYYF--------CTRKPLPAGHSNHDGSLSIDDQDS 64
Query: 228 -----GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRKLP- 280
G + ++ P Y L G+ + A CC ICLA YK+ + +R LP
Sbjct: 65 VVIEIGLDEATLNTYPKLVYSEAKEKLGKGDDSVAAS---CCSICLADYKDSDLLRLLPD 121
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQELER 309
C H+FH +C+D WL++ + CP+C+ R
Sbjct: 122 CDHLFHAQCIDPWLKLHTTCPMCRNSPVR 150
>gi|403353724|gb|EJY76407.1| hypothetical protein OXYTRI_02086 [Oxytricha trifallax]
Length = 354
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G S ++ RL S +Y+ V+++LE E CCICL + + + VR+L C HMFH
Sbjct: 275 EGLSSIELLRLQSEKYQ-VNTDLE--------ESESCCICLDNFTQDQFVRRLGCKHMFH 325
Query: 287 LKCVDQWLRILSCCPLCK 304
C+D+WL CPLCK
Sbjct: 326 KTCLDKWLIRCGACPLCK 343
>gi|356507234|ref|XP_003522374.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 339
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 41/248 (16%)
Query: 69 LVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPD 128
++ SI ++ + +S P+ IW V D + + LL L + F P
Sbjct: 18 MLATSIAIVAINWKRYQSCTHPLHIWTV-VDYAAVFTFRLLMFVDNGLASGMGLDFGWP- 75
Query: 129 VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRF---GSFQRAPNLHVLCI 185
QR + +++ L F W ++G +W +++ G Q+
Sbjct: 76 ---QRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSNTKICLPGGGQK--------W 124
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG---------ASDDQISR 236
L W SY LL C+ + + M A +G A + I
Sbjct: 125 GFLIWLLFSYCG-----LLCIACLAMRKWLKRRQARMLGAQEGIPVSAFGREAVEALIQE 179
Query: 237 LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRI 296
LPS+R V +N EC ICL ++ +VR LPC+H FH++C+D+WLR+
Sbjct: 180 LPSFRLTAVPTNCS-----------ECLICLEEFHVGNQVRGLPCAHNFHVECIDEWLRL 228
Query: 297 LSCCPLCK 304
CP C+
Sbjct: 229 NVNCPRCR 236
>gi|357127649|ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like [Brachypodium
distachyon]
Length = 204
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 227 KGASDDQISRLPSWRY-KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
+G +S LP Y K+ ++ D +C +CL++ + ++VR+LP C H+
Sbjct: 86 RGLDASALSALPVTAYRKKKQERRAGASAGGGGPDSDCAVCLSELADGDKVRELPNCGHV 145
Query: 285 FHLKCVDQWLRILSCCPLCKQELE 308
FHL+CVD WLR + CPLC+ E E
Sbjct: 146 FHLECVDAWLRSRTTCPLCRAEAE 169
>gi|195995807|ref|XP_002107772.1| hypothetical protein TRIADDRAFT_18741 [Trichoplax adhaerens]
gi|190588548|gb|EDV28570.1| hypothetical protein TRIADDRAFT_18741, partial [Trichoplax
adhaerens]
Length = 49
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C IC+ YK++E++R+LPCSH FH +CVD+WLR + CP+C++ +
Sbjct: 1 CAICMDDYKKREKIRELPCSHGFHARCVDKWLRQHNSCPICRENI 45
>gi|432899466|ref|XP_004076572.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Oryzias
latipes]
Length = 395
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+ +Q+ R+P+ R+ + D + C ICL +Y+E +++R LPCSH +H KC
Sbjct: 220 TKEQLKRIPTHRFTKGD------------DYDVCAICLDEYEEGDKLRVLPCSHAYHCKC 267
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CKQ + R
Sbjct: 268 VDPWLTQTKKTCPVCKQRVTR 288
>gi|326525505|dbj|BAJ88799.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G SDD IS L +R K N S+ N D EC IC + YK +E++ +LPC
Sbjct: 91 VGTQSRGLSDDLISYLEPFRNK---CNF---FSSKKNTD-ECVICKSNYKSREKLIRLPC 143
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
SH +H C+ +WL+I CP+C +E+
Sbjct: 144 SHCYHAGCITRWLKINKACPVCNEEV 169
>gi|157105744|ref|XP_001649008.1| hypothetical protein AaeL_AAEL004356 [Aedes aegypti]
gi|108880039|gb|EAT44264.1| AAEL004356-PA [Aedes aegypti]
Length = 517
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 225 ADKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPC 281
+++GA+ + I P +YKR+ E +ED E C ICL++++ +VR+LPC
Sbjct: 429 SNRGATQEMIEHNTFP-HKYKRLRRASET------DEDSEKCTICLSQFEVDNDVRRLPC 481
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH CVDQWL CP+C+ ++E
Sbjct: 482 MHLFHKDCVDQWLVTNKHCPICRVDIE 508
>gi|302821069|ref|XP_002992199.1| hypothetical protein SELMODRAFT_186618 [Selaginella moellendorffii]
gi|300139966|gb|EFJ06696.1| hypothetical protein SELMODRAFT_186618 [Selaginella moellendorffii]
Length = 160
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 192 ALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR---YKRVDSN 248
L Y + +L+ +++S + + D+ + IS L Y R+
Sbjct: 19 GLGYGIAIAVGILVLVSTIMLASYVCVRQQSSSRDRSDGEWTISGLDQVTLESYPRI--V 76
Query: 249 LEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
A P +D C ICLA Y+E E +R LP C H+FH++C+D W+R+ + CP+C+
Sbjct: 77 FSAQQPLPHPQDTACAICLADYREAEMLRVLPDCRHVFHVQCIDSWMRLQATCPMCR 133
>gi|334349289|ref|XP_001362311.2| PREDICTED: hypothetical protein LOC100009881 isoform 2 [Monodelphis
domestica]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 231 DDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
DDQ P K NL N ++ C +C+ +Y E ++RKLPCSH +H+ C+
Sbjct: 267 DDQ----PRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCI 322
Query: 291 DQWLRILSCCPLCKQ 305
D+WL S CP+C++
Sbjct: 323 DRWLSENSTCPICRR 337
>gi|223995979|ref|XP_002287663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976779|gb|EED95106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 319
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 228 GASDDQISRLPSWRYKRVDSNL----EAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
GA+D +I+R PS + D L + + AN++ C +CL +Y+ + VR +PC H
Sbjct: 234 GATDAEINRCPSRTLEVGDDLLRPRTQQQQADGANDEHRCSVCLEQYQVGDVVRTIPCFH 293
Query: 284 MFHLKCVDQWLRILSCCPLCKQ 305
FH C+D W+R + CP+CK
Sbjct: 294 SFHASCIDPWMREKAECPVCKH 315
>gi|15242616|ref|NP_198841.1| RING-H2 finger protein ATL46 [Arabidopsis thaliana]
gi|68565290|sp|Q9FL07.1|ATL46_ARATH RecName: Full=RING-H2 finger protein ATL46
gi|10177512|dbj|BAB10906.1| RING zinc finger protein-like [Arabidopsis thaliana]
gi|51970768|dbj|BAD44076.1| RING finger -like protein [Arabidopsis thaliana]
gi|332007142|gb|AED94525.1| RING-H2 finger protein ATL46 [Arabidopsis thaliana]
Length = 376
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLP-CSH 283
D G I LP + YK + + G A ++P +C +CL ++ EK+++R LP CSH
Sbjct: 105 DSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSH 164
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FHL C+D WL+ S CPLC+ L
Sbjct: 165 AFHLNCIDTWLQSNSTCPLCRGTL 188
>gi|356522660|ref|XP_003529964.1| PREDICTED: putative RING-H2 finger protein ATL50-like [Glycine max]
Length = 187
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 259 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
E +C ICLA+YKEKE +R +P C H FHL C+D WLR S CP+C+ L+
Sbjct: 81 ETTQCVICLAEYKEKELLRIIPKCGHTFHLSCIDMWLRKQSTCPVCRLSLQ 131
>gi|225453756|ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
gi|296089077|emb|CBI38780.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 9/76 (11%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
++ +P+ ++ R EA +S ED +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 65 VAAIPTMKFNR-----EAFSSV---EDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDV 116
Query: 293 WLRILSCCPLCKQELE 308
WLR S CP+C+ L+
Sbjct: 117 WLRKQSTCPVCRLSLQ 132
>gi|224096674|ref|XP_002310694.1| predicted protein [Populus trichocarpa]
gi|222853597|gb|EEE91144.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 259
L+ + C C V G + + A+KG + LP + Y D + E G +
Sbjct: 45 LILMARCACT---RRVTGGSPSSDKANKGVKKKNLQLLPRFSYSAGDGSGEGGGATTKFG 101
Query: 260 DPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
EC ICL ++ E +EVR LP C H FH+ C+D WLR S CP C+Q L
Sbjct: 102 STECAICLGEFVEGDEVRVLPQCGHSFHVVCIDTWLRSHSSCPSCRQIL 150
>gi|125527751|gb|EAY75865.1| hypothetical protein OsI_03783 [Oryza sativa Indica Group]
Length = 238
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
I+ LP+ Y +V AG + EC ICL +E + VR LP C H+FH+ C+D+
Sbjct: 94 IAALPTAAYGKVAGGDAAGGTT------ECAICLGAMQEADAVRVLPACRHVFHVACIDK 147
Query: 293 WLRILSCCPLCKQELE 308
WL S CP+C+ +E
Sbjct: 148 WLASSSSCPVCRAGVE 163
>gi|148223407|ref|NP_001085602.1| E3 ubiquitin-protein ligase RNF181 [Xenopus laevis]
gi|82201112|sp|Q6GPV5.1|RN181_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF181; AltName:
Full=RING finger protein 181
gi|49256561|gb|AAH73002.1| MGC82583 protein [Xenopus laevis]
Length = 156
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKE 274
G ++++GA D D RLP K+V +L P D +C +CL +++E E
Sbjct: 34 GMDIDLGAVDFTEWD---QRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGE 90
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
VR+LPC H+FH C+ WL + CPLC+ EL
Sbjct: 91 TVRQLPCEHLFHSACILPWLGKTNSCPLCRHEL 123
>gi|224146616|ref|XP_002326072.1| predicted protein [Populus trichocarpa]
gi|222862947|gb|EEF00454.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 262 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+C ICL ++ E E+VR LP CSH FH+KC+D+WL + S CPLC+Q L
Sbjct: 115 DCTICLGEFSEGEKVRVLPKCSHGFHVKCIDKWLLLHSSCPLCRQTL 161
>gi|147781800|emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
Length = 224
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 9/76 (11%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
++ +P+ ++ R EA +S ED +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 88 VAAIPTMKFNR-----EAFSSV---EDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDV 139
Query: 293 WLRILSCCPLCKQELE 308
WLR S CP+C+ L+
Sbjct: 140 WLRKQSTCPVCRLSLQ 155
>gi|115495409|ref|NP_001070092.1| RING finger protein 44 [Danio rerio]
gi|123908298|sp|Q08CG8.1|RNF44_DANRE RecName: Full=RING finger protein 44
gi|115313066|gb|AAI24247.1| Zgc:153103 [Danio rerio]
Length = 448
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ NLE S E C +C + ++ ++ +R LPC+H
Sbjct: 366 AKPRGLTKADIEQLPSYRF-----NLENHQS----EQTLCVVCFSDFESRQLLRVLPCNH 416
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WL+ CP+C+
Sbjct: 417 EFHAKCVDKWLKTNRTCPICR 437
>gi|10129643|emb|CAC08239.1| Pspzf zinc finger protein-like [Arabidopsis thaliana]
Length = 498
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 215 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 272
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 401 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 457
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 458 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 493
>gi|255562369|ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
gi|223538562|gb|EEF40166.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
Length = 223
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 267
C L++S N + G A+ G + P+ Y D NL D EC ICL
Sbjct: 88 CSSLVASRSADNSSAGLANTGVKRKALKTFPTVNYS-TDLNLPG-------LDTECAICL 139
Query: 268 AKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQ 305
+++ E VR LP C+H FH++C+D+WL S CP C+
Sbjct: 140 SEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRH 178
>gi|255579580|ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
gi|223529804|gb|EEF31739.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
Length = 235
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+ G A KG + D + ++P + ++ ++A + E C +CL ++ E VR LP
Sbjct: 155 DTGGA-KGLTGDTVEKIPKIKITS-NNTIDA-----SGEKVACSVCLQDFQVGETVRSLP 207
Query: 281 -CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C HMFHL C+D+WL + CPLC+++L
Sbjct: 208 HCHHMFHLPCIDKWLLRHASCPLCRRDL 235
>gi|58332096|ref|NP_001011200.1| E3 ubiquitin-protein ligase RNF181 [Xenopus (Silurana) tropicalis]
gi|82195685|sp|Q5M974.1|RN181_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF181; AltName:
Full=RING finger protein 181
gi|56541182|gb|AAH87570.1| ring finger protein 181 [Xenopus (Silurana) tropicalis]
gi|89268984|emb|CAJ81968.1| novel protein containing RING finger [Xenopus (Silurana)
tropicalis]
Length = 156
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKE 274
G ++++GA D D RLP K+V +L P D +C +CL +++E E
Sbjct: 34 GMDIDLGALDFTEWD---QRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGE 90
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
VR+LPC H+FH C+ WL + CPLC+ EL
Sbjct: 91 TVRQLPCEHLFHSSCILPWLGKTNSCPLCRHEL 123
>gi|357125304|ref|XP_003564334.1| PREDICTED: uncharacterized protein LOC100841715 [Brachypodium
distachyon]
Length = 248
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
++G +G SD+ +S L W+YK + S N +C ICL+ ++ +E + LP
Sbjct: 162 SVGNESRGLSDELMSFLVPWKYK----DRSGFFSRKTNNLDDCSICLSAFRNRERLITLP 217
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL+I CP+CK E+
Sbjct: 218 CKHNYHAGCVTKWLKIDKTCPVCKYEV 244
>gi|22326712|ref|NP_196626.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|79327651|ref|NP_001031869.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|53850555|gb|AAU95454.1| At5g10650 [Arabidopsis thaliana]
gi|58652060|gb|AAW80855.1| At5g10650 [Arabidopsis thaliana]
gi|332004193|gb|AED91576.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332004194|gb|AED91577.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 525
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 215 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 272
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 428 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 484
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 485 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 520
>gi|226530491|ref|NP_001148026.1| RING-H2 finger protein ATL2K [Zea mays]
gi|195615316|gb|ACG29488.1| RING-H2 finger protein ATL2K [Zea mays]
gi|414880463|tpg|DAA57594.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 241
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 227 KGASDDQ-ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
KG D I+ LP+ Y+ + AG+ EC ICL ++ E VR LP C H+
Sbjct: 87 KGGLDPAAIAALPTTLYRNDAAEAGAGSD-------ECTICLGAVQDGEVVRALPACGHV 139
Query: 285 FHLKCVDQWLRILSCCPLCKQELE 308
FH+ CVD WL S CP+C+ E+E
Sbjct: 140 FHVPCVDTWLASSSSCPVCRAEVE 163
>gi|118359792|ref|XP_001013134.1| RING finger related protein [Tetrahymena thermophila]
gi|89294901|gb|EAR92889.1| RING finger related protein [Tetrahymena thermophila SB210]
Length = 383
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 229 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCS--HMFH 286
A+++ I RL +YK + N++ + ECCICL Y+ + + LPCS H +H
Sbjct: 292 ANNEIIKRLQPQKYK------DKINNSEFDTQKECCICLVDYQSDDLIISLPCSKLHHYH 345
Query: 287 LKCVDQWLRILSCCPLCKQELER 309
CV +WL I CP+CK+ LE+
Sbjct: 346 YDCVVKWLNISGVCPICKKPLEQ 368
>gi|255571091|ref|XP_002526496.1| ring finger protein, putative [Ricinus communis]
gi|223534171|gb|EEF35887.1| ring finger protein, putative [Ricinus communis]
Length = 484
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
+C ICL Y+E +E+R LPCSH +H+ CVD+WL+ I CPLC+ ++
Sbjct: 421 QCHICLVDYEEGDEIRVLPCSHEYHVSCVDKWLKEIHGVCPLCRGDV 467
>gi|20466428|gb|AAM20531.1| Pspzf zinc finger protein-like [Arabidopsis thaliana]
Length = 525
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 215 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 272
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 428 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 484
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 485 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 520
>gi|71031078|ref|XP_765181.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352137|gb|EAN32898.1| hypothetical protein TP02_0615 [Theileria parva]
Length = 1138
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
C +CL +Y++ E+R+LPC+H FH C+D WLR + CP+CK
Sbjct: 172 CSVCLEEYQQGTEIRRLPCTHSFHKNCIDTWLRKSTICPICK 213
>gi|399529262|gb|AFP44689.1| hypothetical protein [Eragrostis tef]
Length = 252
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A+ +G + I R+P++RY+ + EC +CLA++++ E +R+LP C
Sbjct: 68 ASRRGLEEAAIRRIPTFRYQ------------SGSNKQECAVCLAEFRDGERLRQLPPCL 115
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H FH+ C+D WL+ + CPLC+
Sbjct: 116 HAFHIDCIDAWLQSTANCPLCR 137
>gi|222423625|dbj|BAH19781.1| AT5G10650 [Arabidopsis thaliana]
Length = 525
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 215 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 272
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 428 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 484
Query: 273 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 485 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 520
>gi|237830951|ref|XP_002364773.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|211962437|gb|EEA97632.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|221507652|gb|EEE33256.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 1542
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
++E C IC Y+ +E+R+LPC+H+FH C+D WLR CP+CK +L
Sbjct: 1487 SDEAKRCSICFEDYEHADELRRLPCTHVFHKNCIDVWLRRSFVCPICKHDL 1537
>gi|226490958|ref|NP_001141061.1| uncharacterized protein LOC100273142 [Zea mays]
gi|194702454|gb|ACF85311.1| unknown [Zea mays]
gi|413939328|gb|AFW73879.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 510
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
+C ICL +Y++ +++R LPC H FHL+CVD+WL+ I CPLC+ ++
Sbjct: 459 QCHICLTEYEDGDQIRTLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 505
>gi|255541456|ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
gi|223548972|gb|EEF50461.1| ring finger protein, putative [Ricinus communis]
Length = 201
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
++ +P+ ++ R + A ED +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 66 VAAIPTMKFNR--------EAFTAVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDV 117
Query: 293 WLRILSCCPLCK 304
WLR S CP+C+
Sbjct: 118 WLRKQSTCPVCR 129
>gi|148223081|ref|NP_001082725.1| E3 ubiquitin-protein ligase RNF12-A [Xenopus laevis]
gi|82198038|sp|Q641J8.1|RF12A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-A; AltName:
Full=RING finger protein 12-A; AltName: Full=XRnf12
gi|51950095|gb|AAH82339.1| XRnf12 protein [Xenopus laevis]
Length = 622
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 610
>gi|340713250|ref|XP_003395158.1| PREDICTED: hypothetical protein LOC100651676 [Bombus terrestris]
Length = 631
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
M A GA+ + I S +YKR + NS A E +C ICL+++++ E VR+LP
Sbjct: 538 MAAISCGATQESIESHTFRHKYKR---EKKVENSEDAIE--KCTICLSEFEDCESVRRLP 592
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQELE 308
C H+FH+ CVDQWL CP+C+ ++E
Sbjct: 593 CMHLFHIDCVDQWLCTNKRCPICRVDIE 620
>gi|395859921|ref|XP_003802274.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Otolemur garnettii]
Length = 619
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 565 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 607
>gi|359484061|ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Vitis vinifera]
Length = 452
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D I+ LPS YK SN E N + C IC Y++ E + L C
Sbjct: 371 IGTESRGLSSDTIASLPSVTYK-AQSNQEGSNDS-------CVICRLDYEDGETLTVLSC 422
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H +C++ WL+I CP+C E+
Sbjct: 423 KHSYHSECINNWLQINKVCPICSTEV 448
>gi|353440930|gb|AEQ94064.1| MIP32849p1 [Drosophila melanogaster]
Length = 333
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 207 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 257
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 258 EFHAKCVDKWLRSNRTCPICR 278
>gi|33411670|dbj|BAC81441.1| XRnf12 [Xenopus laevis]
Length = 616
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 562 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 604
>gi|168693457|ref|NP_001108244.1| E3 ubiquitin-protein ligase RNF12-B [Xenopus laevis]
gi|82208071|sp|Q7T037.1|RF12B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-B; AltName:
Full=RING finger protein 12-B; AltName: Full=XRnf12B
gi|33411672|dbj|BAC81442.1| XRnf12B [Xenopus laevis]
Length = 757
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 745
>gi|449268981|gb|EMC79795.1| E3 ubiquitin-protein ligase rnf12-A [Columba livia]
Length = 595
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 583
>gi|217072448|gb|ACJ84584.1| unknown [Medicago truncatula]
Length = 187
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G I +P+ ++ N EA + A ED +C ICLA YKE+E +R +P C H
Sbjct: 61 DPGTEPVLIEAIPTLKF-----NQEAFS---AIEDTQCVICLADYKEREILRIMPKCGHT 112
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FHL C+D WL+ S CP+C+
Sbjct: 113 FHLSCIDIWLKKQSTCPVCR 132
>gi|213626227|gb|AAI69999.1| XRnf12C protein [Xenopus laevis]
Length = 751
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 697 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 739
>gi|348512116|ref|XP_003443589.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oreochromis
niloticus]
Length = 772
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 694 RGLTKEQIDNLSTRTYGQASLEGEIGRA--------CSVCINEYVQGNKLRRLPCSHEFH 745
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
+ C+D+WL + CP+C+Q +
Sbjct: 746 VHCIDRWLSENNTCPICRQPI 766
>gi|297811909|ref|XP_002873838.1| hypothetical protein ARALYDRAFT_488627 [Arabidopsis lyrata subsp.
lyrata]
gi|297319675|gb|EFH50097.1| hypothetical protein ARALYDRAFT_488627 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G +D I + ++YK+ D ++ +C +CL++++E E +R LP C+H FH
Sbjct: 114 GLNDSMIKSITVYKYKKGDGFVDG---------SDCSVCLSEFEENESLRLLPKCNHAFH 164
Query: 287 LKCVDQWLRILSCCPLCK 304
L C+D WL+ S CPLC+
Sbjct: 165 LPCIDTWLKSHSNCPLCR 182
>gi|226495451|ref|NP_001149296.1| LOC100282919 [Zea mays]
gi|195626142|gb|ACG34901.1| protein binding protein [Zea mays]
Length = 323
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G ++G S D ++ LPS YK +++ GN+ +C IC + ++ E + LPC
Sbjct: 238 VGTENRGLSADALASLPSVTYKM--QSVQDGNTE------QCVICRVELEDGESLIALPC 289
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H++H +C++QWL+I CP+C E+
Sbjct: 290 KHLYHPECINQWLQINKVCPMCSAEV 315
>gi|357127645|ref|XP_003565489.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Brachypodium
distachyon]
Length = 161
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A G I+RLP + R + + A D C +CL +E E VR LP C H
Sbjct: 77 ASGGLDGATIARLPCFVAARRSRSQTTSGANDATTDHCCTVCLGAVEEGETVRALPFCRH 136
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH +CVD WLR+ CP+C+
Sbjct: 137 AFHARCVDAWLRLRPTCPVCR 157
>gi|350420241|ref|XP_003492446.1| PREDICTED: hypothetical protein LOC100747900 [Bombus impatiens]
Length = 626
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
M A GA+ + I S +YKR + NS A E +C ICL+++++ E VR+LP
Sbjct: 533 MAAISCGATQESIESHTFRHKYKR---EKKVENSEDAIE--KCTICLSEFEDCESVRRLP 587
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQELE 308
C H+FH+ CVDQWL CP+C+ ++E
Sbjct: 588 CMHLFHIDCVDQWLCTNKRCPICRVDIE 615
>gi|328872195|gb|EGG20562.1| hypothetical protein DFA_00423 [Dictyostelium fasciculatum]
Length = 675
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 18/93 (19%)
Query: 220 MNMGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 276
++ +KGA +I +LP+ + K ++D+ CCICL + + + V
Sbjct: 597 LDENVNNKGAQATEIKQLPTHKIKTGSKIDT---------------CCICLCEMEIGQNV 641
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
+ LPC+H FH +C+D WL+I CP+ KQ + +
Sbjct: 642 KSLPCTHYFHTECIDNWLKINKICPIDKQSINK 674
>gi|345321013|ref|XP_001513994.2| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Ornithorhynchus
anatinus]
Length = 154
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 276
G ++++G+AD D RLP KR+ NL A +C +CL +++E++
Sbjct: 34 GMDIDLGSADLTDWD---HRLPPPAAKRIVQNLPTAVITEAQAGLKCPVCLLEFEEEQTA 90
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
R +PC H+FH C+ WL + CPLC+ EL
Sbjct: 91 RAMPCQHLFHANCILPWLGKTNSCPLCRHEL 121
>gi|148236424|ref|NP_001084194.1| XRnf12C protein [Xenopus laevis]
gi|33411674|dbj|BAC81443.1| XRnf12C [Xenopus laevis]
Length = 825
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 771 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 813
>gi|167017568|gb|ABZ04755.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|328868880|gb|EGG17258.1| phosphatidylinositol transfer protein [Dictyostelium fasciculatum]
Length = 587
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLE---AGNSAPANEDPECCICLAKYKEKEE 275
N+N GAA K ++I LP K D+++E + + + + C ICL +++
Sbjct: 500 NLNYGAAKK----EEIESLPMHTIKS-DNDIEHLFSDTQSSSQQPTSCSICLDEFEIDNH 554
Query: 276 VRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
++ LPC H FH +C+D+WL+I + CP+CK L
Sbjct: 555 LKTLPCLHHFHSECIDKWLKIKANCPICKSSL 586
>gi|242061886|ref|XP_002452232.1| hypothetical protein SORBIDRAFT_04g022150 [Sorghum bicolor]
gi|241932063|gb|EES05208.1| hypothetical protein SORBIDRAFT_04g022150 [Sorghum bicolor]
Length = 240
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A GA + +P+ Y L+A P C ICLA+ + E VR LP C+H
Sbjct: 121 AQAGARRKALRAMPTLVYSPGMLPLQAAGGG----GPVCAICLAELEPGERVRVLPKCNH 176
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FH++CVD+WL + S CP C+Q L
Sbjct: 177 GFHVRCVDRWLLVRSTCPTCRQPL 200
>gi|224084028|ref|XP_002307200.1| predicted protein [Populus trichocarpa]
gi|118482335|gb|ABK93092.1| unknown [Populus trichocarpa]
gi|222856649|gb|EEE94196.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 193 LSYSFPFLLFLLLC---CCVPLISS--------VLGYNMN----MGAADKGASDDQISRL 237
L F +L LLC C V LI++ V G + A+KG + L
Sbjct: 21 LESDFVVILAALLCALICVVGLIAAARCAWLRRVTGGASSGPPPQAKANKGVKKKNLQLL 80
Query: 238 PSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRI 296
P + Y + G + + EC ICL ++ E +EVR LP C H FH+ C+D+WL
Sbjct: 81 PRFTY-----SAGGGGATTSFGTTECAICLGEFVEGDEVRVLPQCGHGFHVGCIDKWLGS 135
Query: 297 LSCCPLCKQEL 307
S CP C+Q L
Sbjct: 136 HSSCPSCRQIL 146
>gi|414886479|tpg|DAA62493.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 322
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G ++G S D + LPS YK +++ GN+ +C IC + +E E + LPC
Sbjct: 237 VGTENRGLSADTLGSLPSVTYKL--QHVQDGNTE------QCVICRVELEEGESLIALPC 288
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H++H +C++QWL+I CP+C E+
Sbjct: 289 KHLYHPECINQWLQINKVCPMCSAEV 314
>gi|226498638|ref|NP_001150748.1| protein binding protein [Zea mays]
gi|195641466|gb|ACG40201.1| protein binding protein [Zea mays]
Length = 322
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G ++G S D + LPS YK +++ GN+ +C IC + +E E + LPC
Sbjct: 237 VGTENRGLSADTLGSLPSVTYKL--QHVQDGNTE------QCVICRVELEEGESLIALPC 288
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H++H +C++QWL+I CP+C E+
Sbjct: 289 KHLYHPECINQWLQINKVCPMCSAEV 314
>gi|431901142|gb|ELK08267.1| E3 ubiquitin-protein ligase RLIM [Pteropus alecto]
Length = 607
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 553 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 595
>gi|395546427|ref|XP_003775089.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Sarcophilus harrisii]
Length = 618
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 564 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 606
>gi|116782843|gb|ABK22685.1| unknown [Picea sitchensis]
Length = 291
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 243 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 302
K+ DS G+ E+ C +CL + E E VR LPC H FH C+D WLR + CP+
Sbjct: 210 KKTDSENIEGSGKGREEELTCSVCLEQVNEGELVRSLPCLHQFHASCIDPWLRQQATCPV 269
Query: 303 CK 304
CK
Sbjct: 270 CK 271
>gi|15219716|ref|NP_171931.1| RING-H2 finger protein ATL1 [Arabidopsis thaliana]
gi|68565098|sp|P93823.1|ATL1_ARATH RecName: Full=RING-H2 finger protein ATL1
gi|1903359|gb|AAB70441.1| F19P19.21 [Arabidopsis thaliana]
gi|28393753|gb|AAO42287.1| unknown protein [Arabidopsis thaliana]
gi|29824325|gb|AAP04123.1| unknown protein [Arabidopsis thaliana]
gi|332189567|gb|AEE27688.1| RING-H2 finger protein ATL1 [Arabidopsis thaliana]
Length = 381
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 98 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 156 VFHIDCIDIWLQGNANCPLCR 176
>gi|417403353|gb|JAA48484.1| Putative e3 ubiquitin-protein ligase rlim [Desmodus rotundus]
Length = 617
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 563 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 605
>gi|410988853|ref|XP_004000691.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Felis catus]
Length = 621
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 567 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 609
>gi|167017590|gb|ABZ04766.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|167017572|gb|ABZ04757.1| At1g04360 [Arabidopsis thaliana]
gi|167017578|gb|ABZ04760.1| At1g04360 [Arabidopsis thaliana]
gi|167017582|gb|ABZ04762.1| At1g04360 [Arabidopsis thaliana]
gi|167017592|gb|ABZ04767.1| At1g04360 [Arabidopsis thaliana]
gi|167017594|gb|ABZ04768.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|168035662|ref|XP_001770328.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678359|gb|EDQ64818.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 228 GASDDQISRLPSWRYKR----------------------------VDSNLEAGNSAPAN- 258
G SD ISRLP YK VD++LE+ + N
Sbjct: 260 GMSDTDISRLPVRMYKGSVQKPAADQSQPSSKGEDPPCEEVVVDIVDASLESVDEGKQNV 319
Query: 259 --EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+ C +CL + + E +R LPC H FH C+DQWL+ + CP+CK
Sbjct: 320 VEEELTCSVCLEQVVDGEIIRTLPCVHQFHAACIDQWLKQQATCPVCK 367
>gi|444518192|gb|ELV12009.1| E3 ubiquitin-protein ligase RLIM [Tupaia chinensis]
Length = 558
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 504 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 546
>gi|431896576|gb|ELK05988.1| RING finger protein 115 [Pteropus alecto]
Length = 305
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 188 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YKRV 245
L+W+ L +S P +++ +LG N G A ++I+ LP+ ++V
Sbjct: 166 LSWSGLLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQEQV 223
Query: 246 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
D+ LE C +C Y EEVR+LPC+H FH C+ WL + CP+C++
Sbjct: 224 DTGLE------------CSVCKEDYTVGEEVRQLPCNHFFHSSCIVPWLELHDTCPICRK 271
Query: 306 EL 307
L
Sbjct: 272 SL 273
>gi|345807549|ref|XP_859444.2| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 3 [Canis lupus
familiaris]
Length = 625
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 613
>gi|301787517|ref|XP_002929173.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
gi|281350879|gb|EFB26463.1| hypothetical protein PANDA_019274 [Ailuropoda melanoleuca]
Length = 625
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 613
>gi|167017586|gb|ABZ04764.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|355716637|gb|AES05675.1| ring finger protein, LIM domain interacting [Mustela putorius furo]
Length = 625
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 613
>gi|301778327|ref|XP_002924579.1| PREDICTED: e3 ubiquitin-protein ligase RNF167-like [Ailuropoda
melanoleuca]
Length = 353
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 203 LLLCCCVPLISSVLGY-NMNMGAA-----DKGASDDQISRLPSWRYKRVDSNLEAGNSAP 256
LL C+ L + V+G + MGA + Q++RL + KR+ + +
Sbjct: 168 FLLGYCLILFTGVVGLLILAMGAGLIARFIQHQKQLQMNRLTKEQLKRIPIH----DYQK 223
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQELER 309
++ C ICLA+Y++ +++R LPC+H +H +CVD WL + CP+CKQ ++R
Sbjct: 224 GDQYDVCAICLAEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVQR 277
>gi|167017570|gb|ABZ04756.1| At1g04360 [Arabidopsis thaliana]
gi|167017574|gb|ABZ04758.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|126277151|ref|XP_001368112.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 2
[Monodelphis domestica]
Length = 990
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 886 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 945
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 946 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 983
>gi|15809022|ref|NP_291082.1| E3 ubiquitin-protein ligase Arkadia [Mus musculus]
gi|81903227|sp|Q99ML9.1|RN111_MOUSE RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|13676779|gb|AAK38272.1|AF330197_1 Arkadia [Mus musculus]
Length = 989
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 944
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 982
>gi|34452684|ref|NP_057204.2| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|34452686|ref|NP_899196.1| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|426396456|ref|XP_004064457.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Gorilla
gorilla gorilla]
gi|426396458|ref|XP_004064458.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Gorilla
gorilla gorilla]
gi|143811451|sp|Q9NVW2.3|RLIM_HUMAN RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12;
AltName: Full=Renal carcinoma antigen NY-REN-43
gi|15426504|gb|AAH13357.1| Ring finger protein, LIM domain interacting [Homo sapiens]
gi|119619045|gb|EAW98639.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|119619046|gb|EAW98640.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|123993649|gb|ABM84426.1| ring finger protein 12 [synthetic construct]
gi|123999977|gb|ABM87497.1| ring finger protein 12 [synthetic construct]
gi|306921343|dbj|BAJ17751.1| ring finger protein, LIM domain interacting [synthetic construct]
Length = 624
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|332239684|ref|XP_003269028.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 610
>gi|297710376|ref|XP_002831863.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pongo
abelii]
Length = 624
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|297832398|ref|XP_002884081.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329921|gb|EFH60340.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 239
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLE--------AGNS---APANEDPECCICLAK 269
MGA D A DD S + K + L GN+ A N DP C +CL
Sbjct: 143 QMGAVDA-AFDDHTSLFDTGGSKGLTGELVEKIPKMTITGNNNTDASENRDP-CSVCLQD 200
Query: 270 YKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
++ E VR LP C HMFHL C+D WL CP+C+++L
Sbjct: 201 FQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDL 239
>gi|167017576|gb|ABZ04759.1| At1g04360 [Arabidopsis thaliana]
gi|167017580|gb|ABZ04761.1| At1g04360 [Arabidopsis thaliana]
gi|167017584|gb|ABZ04763.1| At1g04360 [Arabidopsis thaliana]
gi|167017588|gb|ABZ04765.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|397507950|ref|XP_003824440.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
paniscus]
gi|397507952|ref|XP_003824441.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
paniscus]
Length = 622
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 610
>gi|301782363|ref|XP_002926595.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like isoform 2
[Ailuropoda melanoleuca]
gi|281347131|gb|EFB22715.1| hypothetical protein PANDA_016265 [Ailuropoda melanoleuca]
Length = 993
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 948
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|114689178|ref|XP_001141975.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
troglodytes]
gi|114689180|ref|XP_001142065.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
troglodytes]
gi|410212840|gb|JAA03639.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410212842|gb|JAA03640.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259648|gb|JAA17790.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259650|gb|JAA17791.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294556|gb|JAA25878.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294558|gb|JAA25879.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337801|gb|JAA37847.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337803|gb|JAA37848.1| ring finger protein, LIM domain interacting [Pan troglodytes]
Length = 620
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 566 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 608
>gi|297833024|ref|XP_002884394.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297330234|gb|EFH60653.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
N +G D G + I + ++Y+++D +E+ +C +CL++++E E +R
Sbjct: 118 NPTIGGGD-GLDESLIKSITVYKYRKMDGFVESS---------DCSVCLSEFQENESLRL 167
Query: 279 LP-CSHMFHLKCVDQWLRILSCCPLCK 304
LP C+H FH+ C+D WL+ S CPLC+
Sbjct: 168 LPKCNHAFHVPCIDTWLKSHSNCPLCR 194
>gi|149757525|ref|XP_001505027.1| PREDICTED: e3 ubiquitin-protein ligase RLIM isoform 1 [Equus
caballus]
Length = 616
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 562 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 604
>gi|354488554|ref|XP_003506433.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
gi|344243810|gb|EGV99913.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 603
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 549 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 591
>gi|311276513|ref|XP_003135236.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Sus scrofa]
gi|335306207|ref|XP_003360418.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Sus scrofa]
gi|350595776|ref|XP_003484178.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 623
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 569 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 611
>gi|218190408|gb|EEC72835.1| hypothetical protein OsI_06563 [Oryza sativa Indica Group]
Length = 194
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G + I LP+ Y+R L G DP C +CL + E VR+LP C H++H
Sbjct: 92 GLTAAAIDALPASEYER---PLGVGGGG----DPACSVCLEDVRGGETVRRLPACGHLYH 144
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
C+D WLR + CPLC+ +L
Sbjct: 145 AACIDAWLRSRTTCPLCRSDL 165
>gi|410961149|ref|XP_003987147.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Felis
catus]
Length = 993
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 948
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|327288909|ref|XP_003229167.1| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like [Anolis
carolinensis]
Length = 586
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 532 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 574
>gi|432120081|gb|ELK38694.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 612
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 558 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 600
>gi|354465240|ref|XP_003495088.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1
[Cricetulus griseus]
gi|344243798|gb|EGV99901.1| E3 ubiquitin-protein ligase Arkadia [Cricetulus griseus]
Length = 990
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 886 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSVL 945
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 946 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 983
>gi|291402922|ref|XP_002718254.1| PREDICTED: ring finger protein 111 isoform 2 [Oryctolagus
cuniculus]
Length = 992
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 947
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|388453379|ref|NP_001253768.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|402910577|ref|XP_003917944.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Papio anubis]
gi|383412441|gb|AFH29434.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412443|gb|AFH29435.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412445|gb|AFH29436.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412447|gb|AFH29437.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412449|gb|AFH29438.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412451|gb|AFH29439.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
Length = 624
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|326924458|ref|XP_003208444.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Meleagris
gallopavo]
Length = 593
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 539 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 581
>gi|7022528|dbj|BAA91632.1| unnamed protein product [Homo sapiens]
Length = 624
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|332025030|gb|EGI65217.1| E3 ubiquitin-protein ligase arkadia-C [Acromyrmex echinatior]
Length = 687
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 228 GASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
GA+ + I S +YKRV +E G A +C ICL+++++ E VR+LPC H+FH
Sbjct: 599 GATQESIESHTFPHKYKRV-KKVENGEDAIE----KCTICLSEFEDCERVRRLPCMHLFH 653
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
+ CVD+WL CP+C+ ++E
Sbjct: 654 IDCVDRWLCTNKRCPICRVDIE 675
>gi|297802346|ref|XP_002869057.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297314893|gb|EFH45316.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 236
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
KG + D + ++P + +NL+A N+D C +CL ++ E VR LP C
Sbjct: 158 GGSKGLTGDLVDKIPKIKITG-KNNLDA----SGNKD-SCSVCLQDFQLGETVRSLPHCH 211
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D WL CP+C+++L
Sbjct: 212 HMFHLPCIDNWLFRHGSCPMCRRDL 236
>gi|167017596|gb|ABZ04769.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 138 VFHIDCIDIWLQGNANCPLCR 158
>gi|145491261|ref|XP_001431630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398735|emb|CAK64232.1| unnamed protein product [Paramecium tetraurelia]
Length = 494
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 229 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLPCSHMFHL 287
S+DQI++LP + ++E N +++ +C ICL Y+E + VR +PC H FH
Sbjct: 405 TSEDQINQLPIRQI-----SMEFINQHQNDDNHIKCMICLEDYEENQIVRTMPCWHYFHQ 459
Query: 288 KCVDQWLRILSCCPLCKQELE 308
+C+D+WL + CP+CK E++
Sbjct: 460 ECIDKWLHKSTLCPICKTEVD 480
>gi|24645397|ref|NP_649902.2| murashka, isoform A [Drosophila melanogaster]
gi|24645399|ref|NP_731366.1| murashka, isoform B [Drosophila melanogaster]
gi|20151609|gb|AAM11164.1| LD30050p [Drosophila melanogaster]
gi|23170810|gb|AAN13432.1| murashka, isoform A [Drosophila melanogaster]
gi|23170811|gb|AAN13433.1| murashka, isoform B [Drosophila melanogaster]
gi|220947288|gb|ACL86187.1| mura-PA [synthetic construct]
gi|220956746|gb|ACL90916.1| mura-PA [synthetic construct]
Length = 868
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 742 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 792
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 793 EFHAKCVDKWLRSNRTCPICR 813
>gi|326511373|dbj|BAJ87700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 218 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
++++ A G I LP++ Y + S A + A +C +CL+++ + +R
Sbjct: 98 FHLHEDGAGPGLDQAAIDELPAFAYAEL-SGSGASSGAKGQRQFDCAVCLSEFAADDRLR 156
Query: 278 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
LP C H FH+ C+D WLR S CPLC+ L
Sbjct: 157 LLPLCGHAFHVACIDTWLRSSSTCPLCRTAL 187
>gi|296235819|ref|XP_002763060.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Callithrix
jacchus]
Length = 620
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 566 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 608
>gi|195330386|ref|XP_002031885.1| GM26248 [Drosophila sechellia]
gi|194120828|gb|EDW42871.1| GM26248 [Drosophila sechellia]
Length = 872
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 746 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 796
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 797 EFHAKCVDKWLRSNRTCPICR 817
>gi|426229341|ref|XP_004008749.1| PREDICTED: RING finger protein 44 [Ovis aries]
Length = 432
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+ AD G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LP
Sbjct: 347 GLTKADSGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLP 397
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQE 306
C+H FH KCVD+WL+ CP+C+ +
Sbjct: 398 CNHEFHTKCVDKWLKANRTCPICRAD 423
>gi|297848660|ref|XP_002892211.1| hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp.
lyrata]
gi|297338053|gb|EFH68470.1| hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG EC +CL +++E E++R +P C H
Sbjct: 98 VNRGLDESAIRAIPVFKFKKRD--VAAGEDDQNKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
+FH+ C+D WL+ + CPLC+ +
Sbjct: 156 VFHIDCIDIWLQGNANCPLCRTSV 179
>gi|449454614|ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 203
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 259 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
ED +C ICL +Y+EKE +R +P C H FHL C+D WLR S CP+C+ L+
Sbjct: 85 EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPLQ 135
>gi|403372055|gb|EJY85916.1| Ring finger protein, putative [Oxytricha trifallax]
Length = 447
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVR 277
N++ K S D I LP ++K+ + +A N+ +E+ +C IC KY E E+++
Sbjct: 355 NLDQKINQKPLSSDMIDSLPETKFKKNEHAHQANNNGVQDEEETKCSICQCKYLEGEDLK 414
Query: 278 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
L C H +H +C+ +WL + CP+C+ E++
Sbjct: 415 TLTCFHKYHKECISEWLHRQNFCPICRTEIK 445
>gi|332235796|ref|XP_003267090.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Nomascus
leucogenys]
Length = 994
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 949
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|335279600|ref|XP_001928853.3| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Sus
scrofa]
Length = 992
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 947
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|149691907|ref|XP_001500171.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 1 [Equus
caballus]
Length = 993
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 948
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|157819973|ref|NP_001100306.1| E3 ubiquitin-protein ligase Arkadia [Rattus norvegicus]
gi|149028844|gb|EDL84185.1| ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 987
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 883 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 942
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 943 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 980
>gi|10944884|emb|CAC14228.1| RING zinc finger LIM domain binding protein [Homo sapiens]
Length = 624
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|344282004|ref|XP_003412765.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Loxodonta
africana]
Length = 609
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 555 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 597
>gi|242062944|ref|XP_002452761.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
gi|241932592|gb|EES05737.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
Length = 89
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 249 LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
+E G + P A ED ECCIC++ Y + ++ +LPC H FH C+++WLRI CPLC
Sbjct: 14 IECGTNQPIEKVLAAEDAECCICISAYDDGAKLCELPCGHHFHCICINKWLRINVMCPLC 73
Query: 304 KQELER 309
+ + +
Sbjct: 74 QYNVPK 79
>gi|212724133|ref|NP_001131833.1| uncharacterized protein LOC100193208 [Zea mays]
gi|194688576|gb|ACF78372.1| unknown [Zea mays]
gi|195627610|gb|ACG35635.1| protein binding protein [Zea mays]
gi|414866067|tpg|DAA44624.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
G S +S S ++ D G S P+ ++ C +CL + + +R LPC H FH+
Sbjct: 183 GPSQLSVSSTGSGNEEKQDGLKADGTSKPSEDELTCSVCLEQVTVGDLLRSLPCLHQFHV 242
Query: 288 KCVDQWLRILSCCPLCKQEL 307
C+D WLR CP+CK ++
Sbjct: 243 NCIDPWLRQQGTCPICKHQV 262
>gi|255081262|ref|XP_002507853.1| predicted protein [Micromonas sp. RCC299]
gi|226523129|gb|ACO69111.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE--------CCICLAKYKEK 273
+GA G S D I +P+W Y + +P PE C +CL ++
Sbjct: 304 LGAVSAGVSADVIDAMPAWTYHSPTPGAMDPSGSPGG-GPEHECSQVPCCSVCLCDAEDG 362
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ +R LPC H++H C+D+WL S CP+CK ++
Sbjct: 363 DAMRTLPCMHVYHADCIDKWLGEHSTCPICKHDV 396
>gi|213624561|gb|AAI71271.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
gi|213627806|gb|AAI71269.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 627
>gi|167017604|gb|ABZ04773.1| At1g04360 [Arabidopsis thaliana]
gi|167017610|gb|ABZ04776.1| At1g04360 [Arabidopsis thaliana]
gi|167017612|gb|ABZ04777.1| At1g04360 [Arabidopsis thaliana]
gi|167017614|gb|ABZ04778.1| At1g04360 [Arabidopsis thaliana]
gi|167017620|gb|ABZ04781.1| At1g04360 [Arabidopsis thaliana]
gi|167017624|gb|ABZ04783.1| At1g04360 [Arabidopsis thaliana]
gi|167017628|gb|ABZ04785.1| At1g04360 [Arabidopsis thaliana]
gi|167017630|gb|ABZ04786.1| At1g04360 [Arabidopsis thaliana]
gi|167017634|gb|ABZ04788.1| At1g04360 [Arabidopsis thaliana]
gi|167017636|gb|ABZ04789.1| At1g04360 [Arabidopsis thaliana]
gi|167017646|gb|ABZ04794.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 138 VFHIDCIDIWLQGNANCPLCR 158
>gi|167017600|gb|ABZ04771.1| At1g04360 [Arabidopsis thaliana]
gi|167017626|gb|ABZ04784.1| At1g04360 [Arabidopsis thaliana]
gi|167017632|gb|ABZ04787.1| At1g04360 [Arabidopsis thaliana]
gi|167017638|gb|ABZ04790.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 138 VFHIDCIDIWLQGNANCPLCR 158
>gi|426257257|ref|XP_004022246.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Ovis aries]
Length = 610
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 556 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 598
>gi|62859463|ref|NP_001016091.1| E3 ubiquitin-protein ligase RNF12 [Xenopus (Silurana) tropicalis]
gi|123884087|sp|Q07G42.1|RNF12_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF12; AltName: Full=RING
finger protein 12
gi|115530795|emb|CAL49424.1| ring finger protein 12 [Xenopus (Silurana) tropicalis]
Length = 639
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 627
>gi|300796903|ref|NP_001179251.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470869|tpg|DAA12984.1| TPA: ring finger protein, LIM domain interacting-like isoform 1
[Bos taurus]
gi|296470870|tpg|DAA12985.1| TPA: ring finger protein, LIM domain interacting-like isoform 2
[Bos taurus]
Length = 611
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 557 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 599
>gi|281342946|gb|EFB18530.1| hypothetical protein PANDA_013950 [Ailuropoda melanoleuca]
Length = 345
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 203 LLLCCCVPLISSVLGY-NMNMGAA-----DKGASDDQISRLPSWRYKRVDSNLEAGNSAP 256
LL C+ L + V+G + MGA + Q++RL + KR+ + +
Sbjct: 168 FLLGYCLILFTGVVGLLILAMGAGLIARFIQHQKQLQMNRLTKEQLKRIPIH----DYQK 223
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQELER 309
++ C ICLA+Y++ +++R LPC+H +H +CVD WL + CP+CKQ ++R
Sbjct: 224 GDQYDVCAICLAEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVQR 277
>gi|167017652|gb|ABZ04797.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 138 VFHIDCIDIWLQGNANCPLCR 158
>gi|114657301|ref|XP_001172710.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 5 [Pan
troglodytes]
gi|410221202|gb|JAA07820.1| ring finger protein 111 [Pan troglodytes]
gi|410252216|gb|JAA14075.1| ring finger protein 111 [Pan troglodytes]
Length = 994
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 949
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|440910350|gb|ELR60156.1| E3 ubiquitin-protein ligase RLIM [Bos grunniens mutus]
Length = 611
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 557 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 599
>gi|387019697|gb|AFJ51966.1| e3 ubiquitin-protein ligase RNF167-like [Crotalus adamanteus]
Length = 367
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 181 HVLCISLLAWNALSYSFPF---LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRL 237
HV+ I + Y PF + ++ C LI + + M D+ S +Q+ ++
Sbjct: 160 HVVLIPEYIFPLGYYLIPFTGVVGVVIAVMCAILIVRCMQHRKRM-RKDR-LSKEQLKKI 217
Query: 238 PSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RI 296
P +YK+ D E C ICL +Y++ + +R LPCSH +H KCVD WL +
Sbjct: 218 PVHKYKKGD------------EYDVCAICLEEYEDGDRLRILPCSHAYHCKCVDPWLTQT 265
Query: 297 LSCCPLCKQELER 309
CP+CKQ + R
Sbjct: 266 KKTCPVCKQRVIR 278
>gi|357137455|ref|XP_003570316.1| PREDICTED: uncharacterized protein LOC100833892 isoform 1
[Brachypodium distachyon]
Length = 518
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
++ LP YK++++ A + D E C ICL +Y++ +++R LPC H FHL+CVD+
Sbjct: 444 VNSLPCKSYKKLET-------AQCSADLEQCHICLTEYEDGDQIRSLPCKHEFHLQCVDK 496
Query: 293 WLR-ILSCCPLCKQEL 307
WL+ I CPLC+ ++
Sbjct: 497 WLKEIHRVCPLCRGDV 512
>gi|326436567|gb|EGD82137.1| hypothetical protein PTSG_02811 [Salpingoeca sp. ATCC 50818]
Length = 262
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+ LP+ +Y E G+S+ +C +CL Y + E VR+L C H+FH CVD W
Sbjct: 184 LDHLPTRQYDAAQDKTEEGDSS----HDQCVVCLQNYSDGEMVRELDCHHLFHQACVDPW 239
Query: 294 LRILSCCPLCKQEL 307
L + CPLCK+ +
Sbjct: 240 LMQHNTCPLCKRAV 253
>gi|167017598|gb|ABZ04770.1| At1g04360 [Arabidopsis thaliana]
gi|167017608|gb|ABZ04775.1| At1g04360 [Arabidopsis thaliana]
gi|167017616|gb|ABZ04779.1| At1g04360 [Arabidopsis thaliana]
gi|167017640|gb|ABZ04791.1| At1g04360 [Arabidopsis thaliana]
gi|167017648|gb|ABZ04795.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 138 VFHIDCIDIWLQGNANCPLCR 158
>gi|194903083|ref|XP_001980810.1| GG17363 [Drosophila erecta]
gi|190652513|gb|EDV49768.1| GG17363 [Drosophila erecta]
Length = 887
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 761 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 811
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 812 EFHAKCVDKWLRSNRTCPICR 832
>gi|194703322|gb|ACF85745.1| unknown [Zea mays]
gi|413939275|gb|AFW73826.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 439
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLP-CSH 283
D G I LP + Y+ V +AP +DP +C +CL ++ +++R LP CSH
Sbjct: 91 DAGVDQAFIDALPVFLYRNVV------GAAPGGKDPFDCAVCLCEFAPDDQLRLLPKCSH 144
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FHL+C+D WL S CPLC++ L
Sbjct: 145 AFHLECIDTWLLSHSTCPLCRRSL 168
>gi|242051609|ref|XP_002454950.1| hypothetical protein SORBIDRAFT_03g001980 [Sorghum bicolor]
gi|241926925|gb|EES00070.1| hypothetical protein SORBIDRAFT_03g001980 [Sorghum bicolor]
Length = 178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
D G S D I+ LP++ + G APA + C +CL + + E+VR+LP C+H
Sbjct: 72 GDHGMSADAIAALPTFVH---------GAEAPALD---CPVCLGQVEAGEKVRRLPKCAH 119
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH CVD WLR S CP+C+
Sbjct: 120 SFHADCVDAWLRAHSTCPMCR 140
>gi|226500884|ref|NP_001149313.1| RING-H2 finger protein ATL2C [Zea mays]
gi|195624254|gb|ACG33957.1| RING-H2 finger protein ATL2C [Zea mays]
Length = 433
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLP-CSH 283
D G I LP + Y+ V +AP +DP +C +CL ++ +++R LP CSH
Sbjct: 87 DAGVDQAFIDALPVFLYRNVV------GAAPGGKDPFDCAVCLCEFSPDDQLRLLPKCSH 140
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FHL+C+D WL S CPLC++ L
Sbjct: 141 AFHLECIDTWLLSHSTCPLCRRSL 164
>gi|195572254|ref|XP_002104111.1| GD20788 [Drosophila simulans]
gi|194200038|gb|EDX13614.1| GD20788 [Drosophila simulans]
Length = 877
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 751 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 801
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 802 EFHAKCVDKWLRSNRTCPICR 822
>gi|30680091|ref|NP_179364.2| NEP1-interacting protein 2 [Arabidopsis thaliana]
gi|68565195|sp|Q8GT74.1|NIP2_ARATH RecName: Full=NEP1-interacting protein 2; AltName: Full=RING-H2
finger protein ATL25
gi|27524904|emb|CAC81898.1| NEP1-interacting protein 2 [Arabidopsis thaliana]
gi|330251581|gb|AEC06675.1| NEP1-interacting protein 2 [Arabidopsis thaliana]
Length = 241
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNL---------EAGNSAPANEDPECC-ICLAKY 270
MGA D A DD S + K + +L N+ A+E+ + C +CL +
Sbjct: 145 QMGAVDT-AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDF 203
Query: 271 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ E VR LP C HMFHL C+D WL CP+C++++
Sbjct: 204 QLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>gi|357472837|ref|XP_003606703.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355507758|gb|AES88900.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 268
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 19/99 (19%)
Query: 225 ADKGASDDQISRLPSWRYKRVD--------SNLEA--------GNSAPANEDPE---CCI 265
+ S+++I+ LP ++K + S+LEA G AN+ + C I
Sbjct: 149 GTRSMSEEEINALPIHKHKVTEGGPPGSPYSSLEAAEIKQDFKGEEGSANDQEDGLTCAI 208
Query: 266 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
CL + + E VR LPC H FH C+DQWLR CP+CK
Sbjct: 209 CLDQVQRGELVRSLPCLHQFHASCIDQWLRRKRTCPVCK 247
>gi|224098363|ref|XP_002199379.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Taeniopygia
guttata]
Length = 595
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 583
>gi|224117248|ref|XP_002331758.1| predicted protein [Populus trichocarpa]
gi|222874455|gb|EEF11586.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
KG D + ++P + + SN N E C +CL ++ E VR LP C
Sbjct: 146 GGSKGLPGDSLEKIPKIK---ITSN---NNGDATGEKVACSVCLQDFQLGETVRSLPHCH 199
Query: 283 HMFHLKCVDQWLRILSCCPLCKQE 306
HMFHL C+D+WL + CPLC+++
Sbjct: 200 HMFHLPCIDKWLLKHASCPLCRRD 223
>gi|12850423|dbj|BAB28712.1| unnamed protein product [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 588
>gi|26325250|dbj|BAC26379.1| unnamed protein product [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 588
>gi|291411188|ref|XP_002721870.1| PREDICTED: ring finger protein, LIM domain interacting [Oryctolagus
cuniculus]
Length = 612
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 558 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 600
>gi|167017602|gb|ABZ04772.1| At1g04360 [Arabidopsis thaliana]
gi|167017606|gb|ABZ04774.1| At1g04360 [Arabidopsis thaliana]
gi|167017622|gb|ABZ04782.1| At1g04360 [Arabidopsis thaliana]
gi|167017642|gb|ABZ04792.1| At1g04360 [Arabidopsis thaliana]
gi|167017644|gb|ABZ04793.1| At1g04360 [Arabidopsis thaliana]
gi|167017650|gb|ABZ04796.1| At1g04360 [Arabidopsis thaliana]
gi|167017654|gb|ABZ04798.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 138 VFHIDCIDIWLQGNANCPLCR 158
>gi|357137459|ref|XP_003570318.1| PREDICTED: uncharacterized protein LOC100833892 isoform 3
[Brachypodium distachyon]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
++ LP YK++++ A + D E C ICL +Y++ +++R LPC H FHL+CVD+
Sbjct: 436 VNSLPCKSYKKLET-------AQCSADLEQCHICLTEYEDGDQIRSLPCKHEFHLQCVDK 488
Query: 293 WLR-ILSCCPLCKQEL 307
WL+ I CPLC+ ++
Sbjct: 489 WLKEIHRVCPLCRGDV 504
>gi|357137457|ref|XP_003570317.1| PREDICTED: uncharacterized protein LOC100833892 isoform 2
[Brachypodium distachyon]
Length = 517
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
++ LP YK++++ A + D E C ICL +Y++ +++R LPC H FHL+CVD+
Sbjct: 443 VNSLPCKSYKKLET-------AQCSADLEQCHICLTEYEDGDQIRSLPCKHEFHLQCVDK 495
Query: 293 WLR-ILSCCPLCKQEL 307
WL+ I CPLC+ ++
Sbjct: 496 WLKEIHRVCPLCRGDV 511
>gi|195499458|ref|XP_002096956.1| GE24768 [Drosophila yakuba]
gi|194183057|gb|EDW96668.1| GE24768 [Drosophila yakuba]
Length = 1040
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 914 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 964
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 965 EFHAKCVDKWLRSNRTCPICR 985
>gi|47078289|ref|NP_035406.3| E3 ubiquitin-protein ligase RLIM [Mus musculus]
gi|259016319|sp|Q9WTV7.2|RLIM_MOUSE RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12
gi|15277964|gb|AAH12960.1| Ring finger protein, LIM domain interacting [Mus musculus]
gi|148682142|gb|EDL14089.1| ring finger protein 12, isoform CRA_a [Mus musculus]
gi|148682143|gb|EDL14090.1| ring finger protein 12, isoform CRA_a [Mus musculus]
Length = 600
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 588
>gi|413916031|gb|AFW55963.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 233 QISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVD 291
++ R+P Y+ +N + S+ ++D +C ICL ++ + EE+R LP C H FH++C+D
Sbjct: 112 ELRRIPVVLYE---ANKQPSASSGTDDDDDCAICLGEFDDGEELRLLPGCHHGFHVQCID 168
Query: 292 QWLRILSCCPLCKQEL 307
WL + + CP C+ L
Sbjct: 169 VWLVMHASCPTCRNSL 184
>gi|403291724|ref|XP_003936919.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Saimiri boliviensis
boliviensis]
Length = 642
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 588 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 630
>gi|387019685|gb|AFJ51960.1| e3 ubiquitin-protein ligase RNF12-A-like [Crotalus adamanteus]
Length = 607
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 553 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 595
>gi|348538752|ref|XP_003456854.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Oreochromis
niloticus]
Length = 387
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 27/134 (20%)
Query: 189 AWNALSYSFPF------LLFLLLCCCVPLISSVL------GYNMNMGAADKGASDDQISR 236
A+ L FPF +LF + C + L+ SV+ Y + S +Q+ R
Sbjct: 157 AYVILRPEFPFPLSYYLILFAGVVCMIILVMSVIFIIRCVQYRKRL--RKNRLSKEQLKR 214
Query: 237 LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-R 295
+P ++ + D + C ICL +Y+E +++R LPCSH +H KCVD WL +
Sbjct: 215 IPIHKFSKGD------------DYDVCAICLDEYEEGDKLRVLPCSHAYHCKCVDPWLTQ 262
Query: 296 ILSCCPLCKQELER 309
CP+CKQ + R
Sbjct: 263 TKKTCPVCKQRVTR 276
>gi|224124792|ref|XP_002319423.1| predicted protein [Populus trichocarpa]
gi|222857799|gb|EEE95346.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 262 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+C ICL ++ E E+VR LP CSH FH+KC+D+WL + S CPLC+Q L
Sbjct: 101 DCPICLGEFSEGEKVRVLPQCSHGFHVKCIDRWLLLHSSCPLCRQAL 147
>gi|357129250|ref|XP_003566278.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 299
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKR----VDSNLEAGNSAPANEDP--ECCICLAKY 270
G +G+ D G S D I+ LP++ Y+ S G + E EC +CL +
Sbjct: 56 GTGALLGSDDLGLSMDDITALPTFTYRSRAPMTPSRCGGGGKSKGREAAAVECVVCLQEL 115
Query: 271 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
+ + VR LP C H FH C+D WLR S CP+C+
Sbjct: 116 ADGDVVRVLPACKHFFHGGCIDVWLRTRSSCPVCR 150
>gi|224144048|ref|XP_002325167.1| predicted protein [Populus trichocarpa]
gi|222866601|gb|EEF03732.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
Query: 229 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLK 288
A + + P +K++D GN +ED +C ICLA+Y+E +++R LPC H +H+
Sbjct: 97 APESVVDSFPLKNHKKLDRV--KGN----DEDEQCYICLAEYEEGDKIRVLPCHHEYHMV 150
Query: 289 CVDQWLR-ILSCCPLCKQEL 307
CVD+WL+ I CPLC+ ++
Sbjct: 151 CVDKWLKEIHGVCPLCRGDV 170
>gi|296084573|emb|CBI25594.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 248 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQ 305
N + ++A + ED +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 102 NHKKADTAQSGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRG 161
Query: 306 EL 307
++
Sbjct: 162 DV 163
>gi|302800686|ref|XP_002982100.1| hypothetical protein SELMODRAFT_59303 [Selaginella moellendorffii]
gi|300150116|gb|EFJ16768.1| hypothetical protein SELMODRAFT_59303 [Selaginella moellendorffii]
Length = 147
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 242 YKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCC 300
Y R+ A P +D C ICLA Y+E E +R LP C H+FH++C+D W+R+ + C
Sbjct: 63 YPRI--VFSAQQPLPHPQDTACAICLADYREAEMLRVLPDCRHVFHVQCIDSWMRLQATC 120
Query: 301 PLCK 304
P+C+
Sbjct: 121 PMCR 124
>gi|167017656|gb|ABZ04799.1| At1g04360-like protein [Arabidopsis lyrata]
Length = 361
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
++G + I +P +++K+ D + AG EC +CL +++E E++R +P C H+
Sbjct: 87 NRGLDESAIRAIPVFKFKKRD--VAAGEDDQNKNSQECSVCLNEFQEDEKLRIIPNCCHV 144
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FH+ C+D WL+ + CPLC+ +
Sbjct: 145 FHIDCIDIWLQGNANCPLCRTSV 167
>gi|255638731|gb|ACU19670.1| unknown [Glycine max]
Length = 205
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 284
A + A + I LPS+R V +N EC ICL ++ +VR LPC+H
Sbjct: 34 AQREAVEALIQELPSFRLTAVPTNCS-----------ECLICLEEFHVGNQVRGLPCTHN 82
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FH++C+D+WLR+ CP C+
Sbjct: 83 FHVECIDEWLRLNVNCPRCR 102
>gi|224055977|ref|XP_002298709.1| predicted protein [Populus trichocarpa]
gi|222845967|gb|EEE83514.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 208 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 267
C L++S N + AA+ G + P +Y D NL D +C ICL
Sbjct: 89 CSNLVASESAANPSTQAANTGVKRKALKTFPIVKYS-TDLNLPG-------LDTQCVICL 140
Query: 268 AKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQ 305
+++ E VR LP C+H FH+KC+D+WL S CP C+
Sbjct: 141 SEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRH 179
>gi|387016758|gb|AFJ50498.1| Hypothetical protein LOC100554767 [Crotalus adamanteus]
Length = 634
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 15/83 (18%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE----CCICLAKYKEKEEVRKLPCS 282
+G + DQI L + Y+ P +ED E C +C+ +Y ++R+LPC
Sbjct: 559 RGLTKDQIDNLSTRNYEN-----------PHSEDDEISKTCSVCINEYVVGNKLRQLPCM 607
Query: 283 HMFHLKCVDQWLRILSCCPLCKQ 305
H FH C+D+WL S CP+C+Q
Sbjct: 608 HEFHFHCIDRWLSENSTCPICRQ 630
>gi|351727597|ref|NP_001237678.1| uncharacterized protein LOC100306109 [Glycine max]
gi|255627575|gb|ACU14132.1| unknown [Glycine max]
Length = 242
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
KG S D + ++P + D+N +A + + C +CL + E VR LP C
Sbjct: 154 GGSKGLSGDLVEKIPKIKIT-TDNNFDA-----SGDRVSCSVCLQDFMLGETVRSLPHCH 207
Query: 283 HMFHLKCVDQWLRILSCCPLCKQ 305
HMFHL C+D+WL CPLC++
Sbjct: 208 HMFHLPCIDKWLFRHGSCPLCRK 230
>gi|26452210|dbj|BAC43193.1| unknown protein [Arabidopsis thaliana]
Length = 241
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNL---------EAGNSAPANEDPECC-ICLAKY 270
MGA D A DD S + K + +L N+ A+E+ + C +CL +
Sbjct: 145 QMGAVDT-AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDF 203
Query: 271 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ E VR LP C HMFHL C+D WL CP+C++++
Sbjct: 204 QLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>gi|413938750|gb|AFW73301.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 75
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
ED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 20 EDAECCICLSSYEDGAELSALPCNHHFHWPCITKWLRMNATCPLCKYNI 68
>gi|357492753|ref|XP_003616665.1| RING finger protein [Medicago truncatula]
gi|355518000|gb|AES99623.1| RING finger protein [Medicago truncatula]
Length = 170
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 223 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 281
+ +G + D I +LP ++ SN A E+ ECCICL+ +++ E+V+ LP C
Sbjct: 70 SSQSEGLNADAIKKLPIILHQSNTSNH-------ALEETECCICLSTFRDGEKVKVLPSC 122
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQELE 308
H FH +CVD WL S CPLC+ L+
Sbjct: 123 DHYFHCECVDAWLVNHSSCPLCRASLK 149
>gi|115488388|ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group]
gi|77554889|gb|ABA97685.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113649188|dbj|BAF29700.1| Os12g0432600 [Oryza sativa Japonica Group]
gi|215766317|dbj|BAG98545.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G S + I +P++ Y+R S +C +C+A K+ + VR+LP C H F
Sbjct: 96 RGLSQEDIEAIPAFEYRRGSSGSGVA---------QCAVCIAAVKDGDTVRRLPACGHAF 146
Query: 286 HLKCVDQWLRILSCCPLCKQEL 307
H CVD WLR + CP+C+ ++
Sbjct: 147 HAPCVDGWLRDHATCPMCRADV 168
>gi|42567430|ref|NP_195309.2| NEP1-interacting protein 1 [Arabidopsis thaliana]
gi|68565196|sp|Q8GT75.2|NIP1_ARATH RecName: Full=NEP1-interacting protein 1; AltName: Full=RING-H2
finger protein ATL26
gi|26451101|dbj|BAC42655.1| unknown protein [Arabidopsis thaliana]
gi|30017273|gb|AAP12870.1| At4g35840 [Arabidopsis thaliana]
gi|332661179|gb|AEE86579.1| NEP1-interacting protein 1 [Arabidopsis thaliana]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
KG + D + ++P + +NL+A N+D C +CL ++ E VR LP C
Sbjct: 158 GGSKGLTGDLVDKIPKIKITG-KNNLDA----SGNKD-SCSVCLQDFQLGETVRSLPHCH 211
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D WL CP+C+++L
Sbjct: 212 HMFHLPCIDNWLFRHGSCPMCRRDL 236
>gi|226499734|ref|NP_001148308.1| RING-H2 finger protein ATL2K [Zea mays]
gi|195617376|gb|ACG30518.1| RING-H2 finger protein ATL2K [Zea mays]
Length = 238
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G ++ LP+ Y+ +AG A++ EC ICL +E E VR LP C H+F
Sbjct: 86 RGLDPAAVAALPTVLYR------DAGG---ADDGAECTICLGAVQEGELVRALPACGHVF 136
Query: 286 HLKCVDQWLRILSCCPLCKQELE 308
H+ CVD W S CP+C+ E+E
Sbjct: 137 HVPCVDTWFASSSSCPVCRAEVE 159
>gi|67846064|ref|NP_001020063.1| E3 ubiquitin-protein ligase RLIM [Rattus norvegicus]
gi|392355774|ref|XP_003752129.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Rattus
norvegicus]
gi|66910661|gb|AAH97491.1| Ring finger protein 12 [Rattus norvegicus]
gi|149055585|gb|EDM07169.1| ring finger protein 12, isoform CRA_b [Rattus norvegicus]
Length = 603
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 549 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 591
>gi|125524894|gb|EAY73008.1| hypothetical protein OsI_00881 [Oryza sativa Indica Group]
Length = 237
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 262 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C +CL++ + E+VR+LP C H+FH++CVD WLR + CPLC+ E E
Sbjct: 128 DCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAEAE 175
>gi|15227929|ref|NP_181765.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
gi|68565335|sp|Q9SLC3.1|ATL41_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL41; AltName:
Full=RING-H2 finger protein ATL41
gi|4567308|gb|AAD23719.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|18491287|gb|AAL69468.1| At2g42360/MHK10.8 [Arabidopsis thaliana]
gi|70905063|gb|AAZ14057.1| At2g42360 [Arabidopsis thaliana]
gi|110736438|dbj|BAF00187.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330255017|gb|AEC10111.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G + I+ LP++ D G +A A E C +CL+ KE+++ R+LP C H+F
Sbjct: 80 RGLNPTVIASLPTFTVGATD-----GVAASATE---CAVCLSVLKEQDKARELPNCKHIF 131
Query: 286 HLKCVDQWLRILSCCPLCKQELE 308
H+ CVD WL S CP+C+ E+E
Sbjct: 132 HVDCVDTWLTTCSTCPVCRTEVE 154
>gi|428181381|gb|EKX50245.1| hypothetical protein GUITHDRAFT_50560, partial [Guillardia theta
CCMP2712]
Length = 50
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
E P C ICL ++ E EE++ LPC H+FH C+DQWLR+ S CPLCK+
Sbjct: 1 EKPTCSICLGEFAEGEELKSLPCVHVFHCACIDQWLRLSSECPLCKR 47
>gi|426236501|ref|XP_004012206.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Ovis aries]
Length = 680
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 203 LLLCCCVPLISSVLGYNMNMGAAD---KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 259
L+ +P++ + +N G D +G + +QI L + Y+ ++ E G +
Sbjct: 572 LVETGTLPILRLAHFFLLNEGDDDDPTRGLTKEQIDNLSTRNYEHSGADGEPGKA----- 626
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C++ Y ++R+LPC H FH+ C+D+WL CP+C+Q
Sbjct: 627 ---CSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSDNCTCPVCRQ 669
>gi|326680221|ref|XP_001923015.2| PREDICTED: hypothetical protein LOC561841 [Danio rerio]
Length = 474
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 214 SVLGYNMNMGA--ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 271
++L + GA A S +I RLP K D AG + +C IC ++YK
Sbjct: 382 ALLAFEEQQGAVMAKNTLSKAEIERLP---IKTYDPTHSAGKT-------DCQICFSEYK 431
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
E +R LPC H +H+KC+D+WL+ + CP+C+ ++
Sbjct: 432 AGERLRMLPCLHDYHVKCIDRWLKENATCPICRADV 467
>gi|170571824|ref|XP_001891879.1| hypotetical protein, conserved [Brugia malayi]
gi|158603363|gb|EDP39313.1| hypothetical protein, conserved [Brugia malayi]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C IC +++++ VR LPC+H FHLKC+D+WLR CP+C+Q +
Sbjct: 393 CVICQCDFEKRDMVRMLPCAHHFHLKCIDKWLRGNRTCPICRQNV 437
>gi|125562449|gb|EAZ07897.1| hypothetical protein OsI_30152 [Oryza sativa Indica Group]
Length = 300
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 222 MGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G +G S D ++ LPS Y+ + D N+E +C IC +++E E +
Sbjct: 215 VGTESRGLSADTLASLPSITYRAQDKQDGNME-----------QCVICRVEFEEGESLVA 263
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC H +H +C++QWL++ CP+C E+
Sbjct: 264 LPCKHSYHSECINQWLQLNKVCPMCSAEV 292
>gi|376335795|gb|AFB32557.1| hypothetical protein 0_15036_01, partial [Abies alba]
Length = 135
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A+ G D I+ LPS Y G S +C ICLA++ E E VR LP C+H
Sbjct: 65 ANTGMKDKSINALPSIIY---------GKSVRPELATDCAICLAEFLEGEGVRVLPSCNH 115
Query: 284 MFHLKCVDQWLRILSCCPLC 303
FH++CVD+WLR S CP C
Sbjct: 116 GFHMECVDKWLRSHSSCPTC 135
>gi|149411042|ref|XP_001505684.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like
[Ornithorhynchus anatinus]
Length = 595
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 583
>gi|357129287|ref|XP_003566296.1| PREDICTED: uncharacterized protein LOC100838775 [Brachypodium
distachyon]
Length = 690
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
A+E +C ICL +Y+E + VR LPC+H FHL CVD+WL+ I CPLC+ ++
Sbjct: 627 ADEAAQCYICLVEYEEGDCVRVLPCNHEFHLTCVDKWLKEIHRVCPLCRGDV 678
>gi|357484247|ref|XP_003612411.1| Ring finger protein [Medicago truncatula]
gi|355513746|gb|AES95369.1| Ring finger protein [Medicago truncatula]
gi|388496508|gb|AFK36320.1| unknown [Medicago truncatula]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 25/132 (18%)
Query: 192 ALSYSFPFLLFLLLC---CCVPLIS----------SVLGYNMNMGAADKGASDDQISRLP 238
A+ F +L LLC C V LI+ S G + A+KG + LP
Sbjct: 28 AIESDFVVILAALLCALICVVGLIAVARCAWLRRDSGAGNSPQQALANKGLKKKVLQSLP 87
Query: 239 SWRYKRVDSNLEAGNSAPAN--EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLR 295
+ Y VDSN P EC ICL+ + +E+R LP C H FH+ C+D WL
Sbjct: 88 KFSY--VDSN-------PGKWLATTECAICLSDFAAGDEIRVLPQCGHGFHVACIDTWLG 138
Query: 296 ILSCCPLCKQEL 307
S CP C+Q L
Sbjct: 139 SHSSCPSCRQIL 150
>gi|402467073|gb|EJW02437.1| hypothetical protein EDEG_03141 [Edhazardia aedis USNM 41457]
Length = 244
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 245 VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
++ N + G+ D C ICL Y E E+++ LPC H FH+ C+D+W + CPLCK
Sbjct: 174 IEYNKDRGDIG--RHDANCSICLNDYNENEKIKMLPCKHHFHVNCIDEWFNVDDICPLCK 231
Query: 305 QELE 308
+ +
Sbjct: 232 KPIN 235
>gi|224028865|gb|ACN33508.1| unknown [Zea mays]
gi|413952408|gb|AFW85057.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 237
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G ++ LP+ Y+ ++ A++ EC ICL +E E VR LP C H+F
Sbjct: 86 RGLDPAAVAALPTVLYR---------DAGGADDGAECTICLGAVQEGELVRALPACGHVF 136
Query: 286 HLKCVDQWLRILSCCPLCKQELE 308
H+ CVD W S CP+C+ E+E
Sbjct: 137 HVPCVDTWFASSSSCPVCRAEVE 159
>gi|219886093|gb|ACL53421.1| unknown [Zea mays]
Length = 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 284
A + A + I LP +R K V ++ EC ICL ++ EVR LPC+H
Sbjct: 206 AQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRGLPCAHN 254
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FH++C+DQWLR+ CP C+
Sbjct: 255 FHVECIDQWLRLNVKCPRCR 274
>gi|301120268|ref|XP_002907861.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102892|gb|EEY60944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 744
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
+GAS I +LP++ + + + GN P+C IC ++ EE++ LPC H +H
Sbjct: 666 RGASASLIHQLPTYTFSTAKEHNDQGN-------PDCLICRCSFEVGEEIKSLPCFHSYH 718
Query: 287 LKCVDQWLRILSCCPLCK 304
CVD WL + CP+C+
Sbjct: 719 SDCVDSWLSLNKVCPVCQ 736
>gi|242060666|ref|XP_002451622.1| hypothetical protein SORBIDRAFT_04g004780 [Sorghum bicolor]
gi|241931453|gb|EES04598.1| hypothetical protein SORBIDRAFT_04g004780 [Sorghum bicolor]
Length = 255
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
KG D I+ LP + Y+R E + EC +CL + + R+LP C H+F
Sbjct: 130 KGLDADAIAALPEFMYRR----KEDAADGKEERELECAVCLGAMADGDAARRLPSCMHVF 185
Query: 286 HLKCVDQWLRILSCCPLCKQELE 308
H CVD WLR S CP+C+ E++
Sbjct: 186 HRGCVDVWLRERSTCPVCRAEVD 208
>gi|5360113|gb|AAD42875.1|AF155109_1 putative ring zinc finger protein NY-REN-43 antigen [Homo sapiens]
gi|189054525|dbj|BAG37298.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 429 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 471
>gi|66811790|ref|XP_640074.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
gi|60468089|gb|EAL66099.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
Length = 320
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
GA +QI LP+ + D +LE + C ICL + + ++ LPC H +H
Sbjct: 241 GAKKEQIDLLPT-HFIDTDKDLEI--FLKGGDSKTCSICLDDFAVNDAIKTLPCIHHYHS 297
Query: 288 KCVDQWLRILSCCPLCKQEL 307
CV++WL+I S CP+CK +
Sbjct: 298 DCVEKWLKIKSVCPICKTSV 317
>gi|335305810|ref|XP_001924902.3| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 635
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C IC+ +Y E ++R LPCSH FH+ C+D+WL S CP+C+ E+
Sbjct: 581 CSICITEYTEGNKIRILPCSHEFHIHCIDRWLAENSTCPICRGEI 625
>gi|296085296|emb|CBI29028.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D I+ LPS YK SN E N + C IC Y++ E + L C
Sbjct: 227 IGTESRGLSSDTIASLPSVTYK-AQSNQEGSNDS-------CVICRLDYEDGETLTVLSC 278
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H +C++ WL+I CP+C E+
Sbjct: 279 KHSYHSECINNWLQINKVCPICSTEV 304
>gi|15219561|ref|NP_174766.1| RING-H2 finger protein ATL34 [Arabidopsis thaliana]
gi|68565270|sp|Q9C7I1.1|ATL34_ARATH RecName: Full=RING-H2 finger protein ATL34; Flags: Precursor
gi|12322941|gb|AAG51457.1|AC069160_3 RING zinc finger protein, putative [Arabidopsis thaliana]
gi|332193658|gb|AEE31779.1| RING-H2 finger protein ATL34 [Arabidopsis thaliana]
Length = 327
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 21/123 (17%)
Query: 200 LLFLLLCCCV--------PLISSVLGYNMNMGA------ADKGASDDQISRLPSWRYKRV 245
LLF +L CCV P +S G +G D I+ PS+ Y +V
Sbjct: 57 LLFSMLACCVCYKYTNTSPHGTSSDTEEGGHGEVAFTRRTSRGLGKDVINSFPSFLYSQV 116
Query: 246 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
L+ G EC ICL +++++E +R +P CSH FH C+D WL S CP+C+
Sbjct: 117 -KGLKIGKGGV-----ECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170
Query: 305 QEL 307
L
Sbjct: 171 ASL 173
>gi|224063645|ref|XP_002301244.1| predicted protein [Populus trichocarpa]
gi|222842970|gb|EEE80517.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
++ P YK+ G A + +C ICL Y+E +++R LPCSH +H+ CVD+W
Sbjct: 287 VNSFPLKNYKKFQ-----GTENVAQHEQQCHICLVDYEEGDKIRVLPCSHEYHMSCVDKW 341
Query: 294 LR-ILSCCPLCKQ 305
L+ I CPLC+
Sbjct: 342 LKEIHGVCPLCRD 354
>gi|189527584|ref|XP_686027.3| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like isoform 1
[Danio rerio]
Length = 632
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 578 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 620
>gi|226500604|ref|NP_001150413.1| LOC100284043 [Zea mays]
gi|195639078|gb|ACG39007.1| protein binding protein [Zea mays]
gi|219888467|gb|ACL54608.1| unknown [Zea mays]
gi|414881944|tpg|DAA59075.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 284
A + A + I LP +R K V ++ EC ICL ++ EVR LPC+H
Sbjct: 206 AQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRGLPCAHN 254
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FH++C+DQWLR+ CP C+
Sbjct: 255 FHVECIDQWLRLNVKCPRCR 274
>gi|198434915|ref|XP_002128365.1| PREDICTED: similar to ring finger protein 215 [Ciona intestinalis]
Length = 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 181 HVLCISLLAWNALSY-SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 239
H + + WNAL + S LF + S L Y + + +D + RL
Sbjct: 233 HPILVKHEQWNALFFISVSICLFFFFKIGWVVFHSDLPYYTYQDVSLREMTDTAVQRLKI 292
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
Y+ + N+ C ICL KY + +R LPC H FH+ C+D WL
Sbjct: 293 QIYRNRNRRKLDEACNETNQPERCAICLDKYYSLQRLRVLPCKHRFHVGCIDPWLLTRRT 352
Query: 300 CPLCK 304
CPLCK
Sbjct: 353 CPLCK 357
>gi|376335785|gb|AFB32552.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335787|gb|AFB32553.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335789|gb|AFB32554.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335791|gb|AFB32555.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335793|gb|AFB32556.1| hypothetical protein 0_15036_01, partial [Abies alba]
Length = 135
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A+ G D I+ LPS Y G S +C ICLA++ E E VR LP C+H
Sbjct: 65 ANTGMKDKSINALPSIIY---------GKSVRPELATDCAICLAEFLEGEGVRVLPSCNH 115
Query: 284 MFHLKCVDQWLRILSCCPLC 303
FH++CVD+WLR S CP C
Sbjct: 116 GFHMECVDKWLRSHSSCPTC 135
>gi|148232126|ref|NP_001091531.1| E3 ubiquitin-protein ligase RNF6 [Bos taurus]
gi|146186811|gb|AAI40556.1| RNF6 protein [Bos taurus]
gi|296481743|tpg|DAA23858.1| TPA: ring finger protein 6 [Bos taurus]
Length = 669
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 203 LLLCCCVPLISSVLGYNMNMGAAD---KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 259
L+ +P++ + +N G D +G + +QI L + Y+ ++ E G +
Sbjct: 561 LVETGTLPILRLAHFFLLNEGDDDDPTRGLTKEQIDNLSTRNYEHSGADGEPGKA----- 615
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C++ Y ++R+LPC H FH+ C+D+WL CP+C+Q
Sbjct: 616 ---CSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQ 658
>gi|224063957|ref|XP_002301320.1| predicted protein [Populus trichocarpa]
gi|222843046|gb|EEE80593.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 259 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
ED +C ICL +Y+EKE +R +P C H FHL C+D WLR S CP+C+
Sbjct: 78 EDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVWLRKQSTCPVCR 124
>gi|326529613|dbj|BAK04753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 14/89 (15%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVD---SNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G +G S D ++ LPS Y+ D SN+E +C IC +++E E +
Sbjct: 207 VGTESRGVSADTLASLPSVTYQAQDKQESNME-----------QCVICRVEFEEGESLVA 255
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC H +H C++QWL++ CP+C E+
Sbjct: 256 LPCKHSYHSDCINQWLQLNKVCPMCSAEV 284
>gi|198422303|ref|XP_002124964.1| PREDICTED: similar to RING finger protein 150 [Ciona intestinalis]
Length = 385
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 28/42 (66%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
C IC+ YK E VR+LPC H+FH KCVD WL CP+CK
Sbjct: 266 CAICIENYKTAEVVRELPCRHIFHKKCVDPWLHTKHTCPMCK 307
>gi|449466065|ref|XP_004150747.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
Length = 313
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 194 SYSFPFLLFLLLCCCVPLISSVL-GYNMN----MG----AADKGASDDQ--ISRLPSWRY 242
++S FLL L C ++V+ GY+M MG + K + DQ I LP +R+
Sbjct: 11 TFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRF 70
Query: 243 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCP 301
G+ + E EC +CL +++ E +R LP C H FH++CVD WL S CP
Sbjct: 71 ---------GSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCP 121
Query: 302 LCKQELE 308
LC+ ++
Sbjct: 122 LCRYRVD 128
>gi|115477677|ref|NP_001062434.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|42407550|dbj|BAD10755.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|42408731|dbj|BAD09949.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|113624403|dbj|BAF24348.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|125604240|gb|EAZ43565.1| hypothetical protein OsJ_28186 [Oryza sativa Japonica Group]
gi|215706910|dbj|BAG93370.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 222 MGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G +G S D ++ LPS Y+ + D N+E +C IC +++E E +
Sbjct: 220 VGTESRGLSADTLASLPSITYRAQDKQDGNME-----------QCVICRVEFEEGESLVA 268
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC H +H +C++QWL++ CP+C E+
Sbjct: 269 LPCKHSYHSECINQWLQLNKVCPMCSAEV 297
>gi|348555451|ref|XP_003463537.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 2
[Cavia porcellus]
Length = 984
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISR--LP-SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R P ++ +++ + + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEATEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|391342339|ref|XP_003745478.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Metaseiulus
occidentalis]
Length = 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 258 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
E C ICL Y+ +EEVR+LPC H+FH C+DQW R CP+C+ ++ +
Sbjct: 107 KEGVRCSICLTDYEVEEEVRRLPCMHLFHAACIDQWFRADKRCPMCRVDITK 158
>gi|357164387|ref|XP_003580036.1| PREDICTED: uncharacterized protein LOC100837445 [Brachypodium
distachyon]
Length = 695
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPE----CCICLAKYKEKEEV 276
+G G S+++I S L W+Y+ + P E P CCIC +Y E++
Sbjct: 612 IGHVSTGLSEEKIMSGLKQWKYRDI----------PFEEPPTGVEPCCICQEEYTNGEDM 661
Query: 277 RKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
+L C H FH C+ QWL I + CP+CK+
Sbjct: 662 GRLDCGHDFHTTCIKQWLVIKNICPICKK 690
>gi|449436824|ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus]
gi|449532198|ref|XP_004173069.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus]
Length = 373
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A G + I + +YKR D +E +C +CL++++E E +R LP CSH
Sbjct: 115 ATTGLDEALIKSITVCKYKREDGLVEGS---------DCSVCLSEFQEDESLRLLPKCSH 165
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FHL+C+D WL+ S CPLC+ +
Sbjct: 166 AFHLQCIDTWLKSHSNCPLCRANI 189
>gi|302806006|ref|XP_002984753.1| hypothetical protein SELMODRAFT_121181 [Selaginella moellendorffii]
gi|300147339|gb|EFJ14003.1| hypothetical protein SELMODRAFT_121181 [Selaginella moellendorffii]
Length = 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A + G + + ++P + Y RV G+S EC +CL +++E +E+R LP C
Sbjct: 130 AMNTGLDESIVKKIPVYVY-RVGGEGVVGSS-------ECVVCLGEFEEDDELRILPKCL 181
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H FHL C+D WLR S CPLC+
Sbjct: 182 HAFHLSCIDVWLRSHSNCPLCR 203
>gi|357477371|ref|XP_003608971.1| RING finger protein [Medicago truncatula]
gi|355510026|gb|AES91168.1| RING finger protein [Medicago truncatula]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A + A + I LP +R K V ++ EC ICL +++ EVR
Sbjct: 185 GLYLTPAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFRVGNEVRG 233
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+D+WLR+ CP C+
Sbjct: 234 LPCAHNFHVECIDEWLRLNVKCPRCR 259
>gi|410988439|ref|XP_004000492.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Felis catus]
Length = 631
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C IC+ +Y E ++R LPC+H FH+ C+D+WL S CP+C++E+
Sbjct: 577 CTICITEYTEGNKLRILPCTHEFHVHCIDRWLSENSTCPICRREV 621
>gi|395816983|ref|XP_003781958.1| PREDICTED: RING finger protein 44 isoform 2 [Otolemur garnettii]
Length = 351
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPCSH
Sbjct: 269 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCSH 319
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|429963119|gb|ELA42663.1| hypothetical protein VICG_00415 [Vittaforma corneae ATCC 50505]
Length = 174
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW-LRILSCCPLCKQE 306
E +C +CL+++K K+ +R+L C H FH KC+D+W L+ SCCPLC++E
Sbjct: 117 ETKDCTVCLSEFKHKQRIRRLDCDHEFHKKCIDKWLLQGNSCCPLCRKE 165
>gi|47215711|emb|CAG04795.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 15/83 (18%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAKYKEKEEVRKLPCSH 283
+G + I +LPS+R+ P N E C +C++ ++ ++ +R LPCSH
Sbjct: 518 RGLTKGDIEQLPSYRFN------------PNNHQSEQTLCVVCMSDFESRQLLRVLPCSH 565
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WLR CP+C+ +
Sbjct: 566 EFHGKCVDKWLRANRTCPICRAD 588
>gi|357148802|ref|XP_003574899.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 302
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 222 MGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G +G S D ++ LPS Y+ + DSN E +C IC +++E E +
Sbjct: 217 VGTESRGLSADTLASLPSVTYEAKDKQDSNTE-----------QCVICRVEFEEGESLVA 265
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC H +H +C++QWL++ CP+C E+
Sbjct: 266 LPCKHSYHSECINQWLQLNKVCPMCSAEV 294
>gi|82217359|sp|Q90ZT7.1|R111A_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-A; AltName:
Full=RING finger protein 111-A
gi|13752371|gb|AAK38637.1|AF329847_1 ring finger-H2 protein, partial [Xenopus laevis]
Length = 923
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 819 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 878
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 879 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 916
>gi|67968828|dbj|BAE00771.1| unnamed protein product [Macaca fascicularis]
Length = 483
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 429 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 471
>gi|410914034|ref|XP_003970493.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Takifugu
rubripes]
Length = 661
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 607 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 649
>gi|449460935|ref|XP_004148199.1| PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus]
gi|449507803|ref|XP_004163133.1| PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus]
Length = 168
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 218 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
+ + +G I LP YK + +A +A AN+ EC ICL +++ E+V+
Sbjct: 68 HRLPSSPPQQGLGATTIISLPITLYKPPAAKEDAPGAA-ANDAGECSICLGVFEDGEKVK 126
Query: 278 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
LP C H +H +CVD+WLR S CPLC+ L
Sbjct: 127 ILPPCRHCYHSECVDRWLRSHSSCPLCRVSL 157
>gi|340522021|gb|EGR52254.1| predicted protein [Trichoderma reesei QM6a]
Length = 514
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 251 AGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQELE 308
A ++AP E+ C IC ++E E++R LPC+H FH C+D WL + CPLC+ +L
Sbjct: 335 AADAAPPPENAGCSICTEDFREGEDMRVLPCNHKFHPTCIDPWLVNVSGTCPLCRLDLH 393
>gi|255568331|ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
gi|223535599|gb|EEF37267.1| ring finger protein, putative [Ricinus communis]
Length = 254
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
I+ LP + YK+ + + E + D EC +CL+ +++E R LP C H FH +C+D+
Sbjct: 105 IASLPIFVYKQSNGDQE-------DNDQECAVCLSVLQDQEMARSLPNCKHTFHAECIDK 157
Query: 293 WLRILSCCPLCKQELE 308
WL S CP+C+ E E
Sbjct: 158 WLTSHSTCPICRTEAE 173
>gi|432878751|ref|XP_004073396.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oryzias
latipes]
Length = 602
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 548 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 590
>gi|432878338|ref|XP_004073308.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 642
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 214 SVLGYNMNMGAAD-KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAK 269
++L +G A +G + I +LPS+R+ P N E C +C++
Sbjct: 549 ALLNLAEQLGEAKLRGLTKGDIEQLPSYRFN------------PNNHQSEQTLCVVCMSD 596
Query: 270 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 306
++ ++ +R LPCSH FH KCVD+WLR CP+C+ +
Sbjct: 597 FESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRAD 633
>gi|294461394|gb|ADE76258.1| unknown [Picea sitchensis]
Length = 541
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 253 NSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCK 304
N +E +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 473 NENVNDEAAQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHRVCPLCR 525
>gi|413968522|gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]
Length = 170
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
+A+KG + LP + Y + A +A EC ICLA+Y +E+R LP C
Sbjct: 49 SANKGLKKKVLQSLPKFTYDPSSTANGAAFTA------ECAICLAEYAVGDEIRVLPQCG 102
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H+FHL+C+D WL S CP C+Q L
Sbjct: 103 HIFHLQCIDTWLGSHSSCPSCRQIL 127
>gi|255583480|ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
gi|223527773|gb|EEF29874.1| ring finger protein, putative [Ricinus communis]
Length = 550
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
+C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+ ++
Sbjct: 480 QCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDV 526
>gi|167017618|gb|ABZ04780.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCWH 137
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 138 VFHIDCIDIWLQGNANCPLCR 158
>gi|395816981|ref|XP_003781957.1| PREDICTED: RING finger protein 44 isoform 1 [Otolemur garnettii]
Length = 432
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPCSH
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCSH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|299473025|emb|CBN77418.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 458
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
C ICLA Y+E+E ++ LPC H FH C+D WL + + CPLCK
Sbjct: 141 CAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCK 182
>gi|449270595|gb|EMC81254.1| E3 ubiquitin-protein ligase Arkadia [Columba livia]
Length = 1000
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GA+ I R +YK+V ++ + + + +C ICL+
Sbjct: 896 LGNVNRGATQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 955
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 956 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 993
>gi|390356327|ref|XP_001181593.2| PREDICTED: RING finger protein 215-like [Strongylocentrotus
purpuratus]
Length = 428
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 293
+S++ W+YKR A +S + C +CL ++ + + +R LPC H FH +CVD W
Sbjct: 308 LSKMSVWKYKRKKYEFSASDSMDS-----CAVCLEEFFKGQTIRMLPCHHTFHNRCVDSW 362
Query: 294 LRILSCCPLCKQEL 307
L CPLCK ++
Sbjct: 363 LIRKRTCPLCKMDI 376
>gi|297737435|emb|CBI26636.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 218 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 277
YN+ + KG + I +LP SN N+ NE C ICL +K+ E R
Sbjct: 181 YNI---SGAKGLPHNFIEKLP-------KSNFCHSNAEMYNE-ISCTICLQDFKDGEMTR 229
Query: 278 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
LP C H FH++CVDQWL + CP+C++++
Sbjct: 230 GLPSCRHYFHMECVDQWLTLHGSCPMCRKDV 260
>gi|156407027|ref|XP_001641346.1| predicted protein [Nematostella vectensis]
gi|156228484|gb|EDO49283.1| predicted protein [Nematostella vectensis]
Length = 92
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A KG + +I +LP++R S N+D C +CL ++EK+ VR LPC H
Sbjct: 19 AKPKGLTRAEIDQLPTYRV--------TAESKKQNDDARCVVCLVDFEEKQLVRTLPCLH 70
Query: 284 MFHLKCVDQWLRI 296
+H +C+D+WL++
Sbjct: 71 EYHTRCIDKWLKV 83
>gi|157137022|ref|XP_001656980.1| ring finger protein [Aedes aegypti]
gi|108884247|gb|EAT48472.1| AAEL000523-PA [Aedes aegypti]
Length = 559
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + +I +LPS+++ ++ G+ C +C+ ++ ++ +R LPCSH
Sbjct: 475 AKPRGLARPEIDQLPSYKF---NAETHTGDQT------SCVVCMCDFEARQILRVLPCSH 525
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 526 EFHAKCVDKWLRSNRTCPICR 546
>gi|395505163|ref|XP_003756914.1| PREDICTED: RING finger protein 44 isoform 1 [Sarcophilus harrisii]
Length = 438
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 356 AKPRGLTKADIEQLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 406
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 407 EFHAKCVDKWLKANRTCPICRAD 429
>gi|449680832|ref|XP_002156770.2| PREDICTED: RING finger protein 150-like [Hydra magnipapillata]
Length = 362
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
+A ED C +CL YK+ E +R+LPC H+FH C+D WL CP+CK +
Sbjct: 233 AATHEEDDTCAVCLESYKDGETLRELPCIHLFHKSCIDPWLLYHRTCPMCKSNI 286
>gi|301133572|gb|ADK63408.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 355
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A A + I LP +R K V + EC ICL +++ EVR
Sbjct: 202 GLYLTPAQTEAVEALIQELPKFRLKAVPDDCG-----------ECLICLEEFQIGHEVRG 250
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>gi|170039241|ref|XP_001847450.1| ring finger protein [Culex quinquefasciatus]
gi|167862851|gb|EDS26234.1| ring finger protein [Culex quinquefasciatus]
Length = 539
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + +I +LPS+++ ++ G+ C +C+ ++ ++ +R LPCSH
Sbjct: 455 AKPRGLARPEIDQLPSYKF---NAETHTGDQT------SCVVCMCDFEARQVLRVLPCSH 505
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 506 EFHAKCVDKWLRSNRTCPICR 526
>gi|326489897|dbj|BAJ94022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505686|dbj|BAJ95514.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G G ++++I S L W+Y + LE PA CCIC Y + E++ ++
Sbjct: 623 IGHVSTGLTEEKIMSGLKQWKYLHIA--LEE----PATAIEPCCICQEDYTDGEDMGRVE 676
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQ 305
C H FH +C+ QWL I + CP+CK+
Sbjct: 677 CGHYFHTECIKQWLVIKNTCPICKK 701
>gi|297846872|ref|XP_002891317.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337159|gb|EFH67576.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 648
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 228 GASDDQIS-RLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
G +++ IS RL +YK + S+P +P CCIC +YKE E++ L C H FH
Sbjct: 567 GLNEETISNRLKQQKYK-------SSTSSPQEVEP-CCICQEEYKEGEDIGMLECGHDFH 618
Query: 287 LKCVDQWLRILSCCPLCK 304
+C+ +WL+ + CP+CK
Sbjct: 619 SQCIKEWLKQKNLCPICK 636
>gi|403307926|ref|XP_003944433.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Saimiri boliviensis
boliviensis]
Length = 271
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 188 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YKRV 245
+W+ + +S P +++ +LG N G A ++I+ LP+ ++V
Sbjct: 132 FSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQEQV 189
Query: 246 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
D+ LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C++
Sbjct: 190 DTGLE------------CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRK 237
Query: 306 EL 307
L
Sbjct: 238 SL 239
>gi|358249356|ref|NP_001239785.1| uncharacterized protein LOC100805406 [Glycine max]
gi|255645197|gb|ACU23096.1| unknown [Glycine max]
Length = 274
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 243 KRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 301
K+ EAG A +ED C ICL + K E VR LPC H FH C+D WLR CP
Sbjct: 193 KQASGGTEAG--AKGSEDELTCTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCP 250
Query: 302 LCK 304
+CK
Sbjct: 251 VCK 253
>gi|259155278|ref|NP_001158881.1| E3 ubiquitin-protein ligase RNF167 precursor [Salmo salar]
gi|223647828|gb|ACN10672.1| E3 ubiquitin-protein ligase RNF167 precursor [Salmo salar]
Length = 403
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+ +Q+ R+P ++ + D E C ICL +Y+E +++R LPCSH +H KC
Sbjct: 220 TKEQLKRIPIHKFTKGD------------EYDVCAICLDEYEEGDKLRVLPCSHAYHSKC 267
Query: 290 VDQWLR-ILSCCPLCKQELER 309
VD WL CP+CKQ + R
Sbjct: 268 VDPWLTGTKKTCPVCKQRVTR 288
>gi|226503579|ref|NP_001141538.1| uncharacterized protein LOC100273652 [Zea mays]
gi|194704976|gb|ACF86572.1| unknown [Zea mays]
gi|414587073|tpg|DAA37644.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 250 EAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
EA + A E EC +CLA+ + E R LP C+H FH +C+DQWLR S CPLC+ ++
Sbjct: 105 EAKDDHRAGEALECAVCLAELADGEPARFLPRCAHGFHAECIDQWLRGHSTCPLCRVDV 163
>gi|168027185|ref|XP_001766111.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682754|gb|EDQ69170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 233 QISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
+ LP++ +K S+ EAG C ICL Y+ E++R LPC H FH+ C+DQ
Sbjct: 161 DVDALPTFVFKGAGSD-EAGTGE------TCAICLEDYESGEKLRHLPCHHDFHVGCIDQ 213
Query: 293 WLRILS-CCPLCKQE 306
WL CP+CKQ+
Sbjct: 214 WLLTRKPFCPICKQD 228
>gi|356536643|ref|XP_003536846.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
Length = 340
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G + I +P +YK + N E G + + EC +CL+++++ E++R +P CSH+F
Sbjct: 84 RGLEEAVIKLIPVIQYKPEEGNTEFGERSLISS--ECSVCLSEFEQDEKLRVIPNCSHVF 141
Query: 286 HLKCVDQWLRILSCCPLCKQ 305
H+ C+D WL+ + CPLC++
Sbjct: 142 HIDCIDVWLQNNAHCPLCRR 161
>gi|449506660|ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
Length = 391
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 194 SYSFPFLLFLLLCCCVPLISSVL-GYNMN----MG----AADKGASDDQ--ISRLPSWRY 242
++S FLL L C ++V+ GY+M MG + K + DQ I LP +R+
Sbjct: 89 TFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRF 148
Query: 243 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCP 301
G+ + E EC +CL +++ E +R LP C H FH++CVD WL S CP
Sbjct: 149 ---------GSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCP 199
Query: 302 LCKQELE 308
LC+ ++
Sbjct: 200 LCRYRVD 206
>gi|299471057|emb|CBN78917.1| protein binding / ubiquitin-protein ligase/ zinc ion binding
[Ectocarpus siliculosus]
Length = 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
Query: 228 GASDDQISRLPSWRYKR--VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 285
GAS+ +I R PS+ DS ++ N C ICL +K +E VR +PC H F
Sbjct: 161 GASEGEIRRNPSFVIPEPAADSVVKPKN---------CSICLYPFKPRERVRIIPCLHQF 211
Query: 286 HLKCVDQWLRILSCCPLCK 304
H +C+D WLR + CP+CK
Sbjct: 212 HTECIDPWLRQNAICPVCK 230
>gi|224071365|ref|XP_002303424.1| predicted protein [Populus trichocarpa]
gi|222840856|gb|EEE78403.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
AA G + I + +YK+ D +E +C +CL++++E E +R LP CS
Sbjct: 114 AATTGVDEALIRSITVCKYKKGDGLIEGT---------DCSVCLSEFEEDESIRLLPKCS 164
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H FH+ C+D WLR S CPLC+ +
Sbjct: 165 HAFHVPCIDTWLRSHSNCPLCRANI 189
>gi|449456847|ref|XP_004146160.1| PREDICTED: NEP1-interacting protein 1-like [Cucumis sativus]
gi|449533956|ref|XP_004173936.1| PREDICTED: NEP1-interacting protein 1-like [Cucumis sativus]
Length = 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRKLP-CSHM 284
KG D + ++P + NS A + CC +CL ++ E VR LP C HM
Sbjct: 160 KGLPGDSVEKIPKIVVSK-------NNSVDAYGERVCCSVCLQDFQLGETVRSLPYCHHM 212
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FHL C+D+WL CPLC+++L
Sbjct: 213 FHLPCIDKWLLTHGSCPLCRRDL 235
>gi|357128092|ref|XP_003565710.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 246
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 262 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C +CLA++++ EE R LP C H FH++C+D W R S CPLC+ +++
Sbjct: 146 DCAVCLAEFEQGEEARALPRCGHRFHVECIDAWFRGNSTCPLCRADVQ 193
>gi|301614137|ref|XP_002936559.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 165-like
[Xenopus (Silurana) tropicalis]
Length = 351
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L L L P +L +G+ +GA + I
Sbjct: 208 TQMVVHEIRNYPYPQLHLLALQGLSPTRHTSAVRESYEELLQLEDRLGSVSRGAVQNIIE 267
Query: 236 R--LPSWRYKRV--DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R P KR+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 268 RCTFPHKYKKRIPHDGKDAKEDEEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQVCVD 327
Query: 292 QWLRILSCCPLCKQELE 308
QWL CP+C+ ++E
Sbjct: 328 QWLATSKKCPICRVDIE 344
>gi|237832047|ref|XP_002365321.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
gi|211962985|gb|EEA98180.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
Length = 1290
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
+CCIC+ +Y E +R+LPC H FH C+ +W++ S CPLC+ EL R
Sbjct: 1237 DCCICMGEYAVSESLRRLPCMHAFHTSCLRRWIQEKSTCPLCRFELTR 1284
>gi|226500022|ref|NP_001146938.1| RING-H2 finger protein ATL2A [Zea mays]
gi|195605428|gb|ACG24544.1| RING-H2 finger protein ATL2A [Zea mays]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP- 280
M A KG + +LP+ + E G E PEC ICLA++ +EVR LP
Sbjct: 80 MPAPRKGVDRAALEKLPTVPFA-----FEEGQD---GERPECAICLAEFAPGDEVRVLPP 131
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C+H FH CVD WL S CP C+ L
Sbjct: 132 CAHAFHAACVDTWLLCTSTCPSCRTAL 158
>gi|413943009|gb|AFW75658.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G D I LP + Y+ V G A A E +C +CL ++ ++ +R LP C H
Sbjct: 115 DAGLDQDVIDALPVFLYREV-----VGAGAGAKEPFDCAVCLCEFAGEDRLRLLPLCGHA 169
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FH+ C+D WL S CPLC+
Sbjct: 170 FHIGCIDTWLLSNSTCPLCR 189
>gi|195638030|gb|ACG38483.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 250 EAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
EA + A E EC +CLA+ + E R LP C+H FH +C+DQWLR S CPLC+ ++
Sbjct: 105 EAKDDHRAGEALECAVCLAELADGEPARFLPRCAHGFHAECIDQWLRGHSTCPLCRVDV 163
>gi|293332277|ref|NP_001168249.1| uncharacterized LOC100382012 [Zea mays]
gi|223947011|gb|ACN27589.1| unknown [Zea mays]
gi|413938289|gb|AFW72840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 185
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
AA++G + + LP+ Y E G EC ICLA+++ + VR LP C
Sbjct: 66 AANRGVKKEVLRSLPTVTYVSDSGKAEGGAD-------ECAICLAEFEGGQAVRVLPQCG 118
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H FH CVD WLR S CP C++ L
Sbjct: 119 HAFHAACVDTWLRAHSSCPSCRRVL 143
>gi|395505165|ref|XP_003756915.1| PREDICTED: RING finger protein 44 isoform 2 [Sarcophilus harrisii]
Length = 350
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 268 AKPRGLTKADIEQLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 318
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 319 EFHAKCVDKWLKANRTCPICRAD 341
>gi|350583447|ref|XP_001925867.3| PREDICTED: E3 ubiquitin-protein ligase RNF115-like, partial [Sus
scrofa]
Length = 259
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 20/126 (15%)
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGA--ADKGASDDQISRLPS--WR 241
S +W+ + +S P +++ +LG N G ADK ++I+ LP+
Sbjct: 118 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPPADK----EKITSLPTVTIT 173
Query: 242 YKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 301
++VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP
Sbjct: 174 QEQVDKGLE------------CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDACP 221
Query: 302 LCKQEL 307
+C++ L
Sbjct: 222 VCRKSL 227
>gi|334311222|ref|XP_001380922.2| PREDICTED: RING finger protein 44-like [Monodelphis domestica]
Length = 395
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 313 AKPRGLTKADIEQLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 363
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 364 EFHAKCVDKWLKANRTCPICRAD 386
>gi|224104393|ref|XP_002313422.1| predicted protein [Populus trichocarpa]
gi|222849830|gb|EEE87377.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 224 AADKGASDDQISRLPSWRYK-----------------------RVDSNLEAGNSAPANED 260
A+ ++++I+ LP +YK + DS GN + ++
Sbjct: 151 ASTTSMTEEEINALPVHKYKVPVQENGSASLQHASSSSAPAETKQDSKNADGNMKTSEDE 210
Query: 261 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
C ICL + E VR LPC H FH C+D WLR CP+CK
Sbjct: 211 LTCTICLEQVNRGELVRSLPCLHQFHTNCIDPWLRQQGTCPVCK 254
>gi|224087937|ref|XP_002308266.1| predicted protein [Populus trichocarpa]
gi|222854242|gb|EEE91789.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 10/78 (12%)
Query: 235 SRLPS-WRYKR--VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCV 290
S LPS ++YK+ +D + + G+ EC +CL+ ++E EEVR+LP C H FH C+
Sbjct: 83 SNLPSSFKYKKGKIDGDQDQGSGY------ECAVCLSAFEEGEEVRQLPRCKHSFHAPCI 136
Query: 291 DQWLRILSCCPLCKQELE 308
D WL S CPLC+ ++
Sbjct: 137 DMWLYSHSDCPLCRSSVD 154
>gi|15233745|ref|NP_192652.1| putative RING-H2 finger protein ATL37 [Arabidopsis thaliana]
gi|68565317|sp|Q9M0R4.1|ATL37_ARATH RecName: Full=Putative RING-H2 finger protein ATL37; Flags:
Precursor
gi|7267556|emb|CAB78037.1| putative protein [Arabidopsis thaliana]
gi|332657325|gb|AEE82725.1| putative RING-H2 finger protein ATL37 [Arabidopsis thaliana]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 207 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCIC 266
CC+ + G+ + +G D I P++ Y V + + GN EC IC
Sbjct: 71 CCIEE-NETGGHEVLHSRVRRGIDKDVIESFPAFLYSEVKA-FKIGNGGV-----ECAIC 123
Query: 267 LAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
L +++++E +R +P CSH FH C+D+WL S CP+C+ L
Sbjct: 124 LCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANL 165
>gi|301628324|ref|XP_002943307.1| PREDICTED: RING finger protein 44-like [Xenopus (Silurana)
tropicalis]
Length = 430
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 348 AKPRGLTKANIEQLPSYRF-----NAESHQS----EQTLCVVCFSDFESRQLLRVLPCNH 398
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 399 EFHAKCVDKWLKSNRTCPICRAD 421
>gi|221506522|gb|EEE32139.1| RING finger protein 6/12/38, putative [Toxoplasma gondii VEG]
Length = 1213
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 309
+CCIC+ +Y E +R+LPC H FH C+ +W++ S CPLC+ EL R
Sbjct: 1160 DCCICMGEYAVSESLRRLPCMHAFHTSCLRRWIQEKSTCPLCRFELTR 1207
>gi|156354054|ref|XP_001623218.1| predicted protein [Nematostella vectensis]
gi|156209895|gb|EDO31118.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 9/73 (12%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G S + I R+PS+R+ + ++ G+ C +C+ Y +E++RKLPC+H
Sbjct: 32 AKSRGLSKEVIDRIPSFRFSASNKDMSNGS---------CVVCMMDYTNREKLRKLPCNH 82
Query: 284 MFHLKCVDQWLRI 296
FH KC+D+WL++
Sbjct: 83 DFHSKCIDRWLKV 95
>gi|356538405|ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
Length = 226
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 193 LSYSFPFLLFLLLC---CCVPLIS----------SVLGYNMNMGAADKGASDDQISRLPS 239
L F +L LLC C V L++ S G + A+KG + LP
Sbjct: 29 LESDFVVILAALLCALICVVGLVAVARCAWLRRGSGAGNSPRQALANKGLKKKVLQSLPK 88
Query: 240 WRYKRVDSNLEAGNSAPAN--EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRI 296
+ Y VDSN P+ EC ICLA++ +E+R LP C H FH+ C+D WL
Sbjct: 89 FAY--VDSN-------PSKWLATSECAICLAEFAAGDEIRVLPQCGHGFHVPCIDTWLGS 139
Query: 297 LSCCPLCKQEL 307
S CP C+Q L
Sbjct: 140 HSSCPSCRQVL 150
>gi|302755532|ref|XP_002961190.1| hypothetical protein SELMODRAFT_65861 [Selaginella moellendorffii]
gi|302766788|ref|XP_002966814.1| hypothetical protein SELMODRAFT_65866 [Selaginella moellendorffii]
gi|300164805|gb|EFJ31413.1| hypothetical protein SELMODRAFT_65866 [Selaginella moellendorffii]
gi|300172129|gb|EFJ38729.1| hypothetical protein SELMODRAFT_65861 [Selaginella moellendorffii]
Length = 293
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A + A + I +LP ++ KRV + E C ICL + EVR
Sbjct: 202 GLTLTPAQREAVESLIQQLPKFQLKRVPT-----------ECSSCSICLEDFTVGTEVRG 250
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH+ C+D+WLR+ CP C+
Sbjct: 251 LPCAHNFHVDCIDEWLRLNVKCPQCR 276
>gi|242072438|ref|XP_002446155.1| hypothetical protein SORBIDRAFT_06g002790 [Sorghum bicolor]
gi|241937338|gb|EES10483.1| hypothetical protein SORBIDRAFT_06g002790 [Sorghum bicolor]
Length = 696
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 215 VLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 273
+L +G + G +++ I S + W+Y + +LE P +P CCIC Y E
Sbjct: 606 LLALGERIGYVNTGLTEENIMSNMKQWKYALI--SLE---DPPTGVEP-CCICQEDYVEG 659
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
E++ +L C H FH C+ QWL I + CP+CK+
Sbjct: 660 EDLGRLDCGHDFHTGCIKQWLVIKNLCPICKK 691
>gi|414866068|tpg|DAA44625.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
G S +S S + D G S P+ ++ C +CL + + +R LPC H FH+
Sbjct: 183 GPSQLSVSSTGSGNEVKQDGLKADGTSKPSEDELTCSVCLEQVTVGDLLRSLPCLHQFHV 242
Query: 288 KCVDQWLRILSCCPLCKQEL 307
C+D WLR CP+CK ++
Sbjct: 243 NCIDPWLRQQGTCPICKHQV 262
>gi|222617002|gb|EEE53134.1| hypothetical protein OsJ_35938 [Oryza sativa Japonica Group]
Length = 162
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G++ + I +P++ Y+R S +C +C+A K+ + VR+LP C H FH
Sbjct: 74 GSAQEDIEAIPAFEYRRGSSGSGVA---------QCAVCIAAVKDGDTVRRLPACGHAFH 124
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
CVD WLR + CP+C+ ++
Sbjct: 125 APCVDGWLRDHATCPMCRADV 145
>gi|226529223|ref|NP_001146218.1| uncharacterized protein LOC100279788 precursor [Zea mays]
gi|219886227|gb|ACL53488.1| unknown [Zea mays]
Length = 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G D I LP + Y+ V G A A E +C +CL ++ ++ +R LP C H
Sbjct: 115 DAGLDQDVIDALPVFLYREV-----VGAGAGAKEPFDCAVCLCEFAGEDRLRLLPLCGHA 169
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FH+ C+D WL S CPLC+
Sbjct: 170 FHIGCIDTWLLSNSTCPLCR 189
>gi|353235357|emb|CCA67371.1| hypothetical protein PIIN_01202 [Piriformospora indica DSM 11827]
Length = 1088
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 202 FLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP 261
++L +++ ++G +G S + LPS YK E ++
Sbjct: 839 YVLDDDFDDSYEALMALTQHVGPVKRGCSQKSLEELPSGTYKEFS---EGATEKVVGDNG 895
Query: 262 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
C ICL Y+ ++ KLP CSH +H CV +WL+ CP+C++ +E
Sbjct: 896 NCAICLEDYQPEDACMKLPRCSHFYHKDCVKEWLKSAKTCPVCRETVE 943
>gi|148231430|ref|NP_001087597.1| ring finger protein 167 precursor [Xenopus laevis]
gi|51513472|gb|AAH80409.1| MGC86297 protein [Xenopus laevis]
Length = 341
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 173 SFQRAPNLHVLCISLLAWNALSYSFPFLLFL---LLCCCVPLISSVLGYNMNMGAADKGA 229
+F N H+ + ++ Y PF++ + ++ C+ ++ + Y M
Sbjct: 153 NFSYYNNSHIYLMPDYYFSLGYYLIPFIVVVSAFIIIMCIVMVVRCVQYRKRM--RRNRL 210
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
S +Q++++P ++K+ D + C ICL +Y+E +++R LPCSH +H C
Sbjct: 211 SKEQLNKIPIHKFKKGD------------DYDVCAICLEEYEEGDKLRVLPCSHAYHSSC 258
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CK + R
Sbjct: 259 VDPWLTKTKKSCPVCKNRVFR 279
>gi|449487766|ref|XP_004157790.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
Length = 206
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 217 GYN--MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKE 274
GY+ + + +A + A + I LP +R K V ++ EC ICL ++
Sbjct: 56 GYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGN 104
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
EVR +PC+H FH++C+D+WLR+ CP C+
Sbjct: 105 EVRGMPCAHNFHVECIDEWLRLNVKCPRCR 134
>gi|22327588|ref|NP_199342.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|58652066|gb|AAW80858.1| At5g45290 [Arabidopsis thaliana]
gi|58652090|gb|AAW80870.1| At5g45290 [Arabidopsis thaliana]
gi|332007844|gb|AED95227.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 545
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 258 NEDP-ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
+EDP +C ICL +Y+E + +R LPC H FH CVD+WL+ I CPLC+ ++
Sbjct: 484 SEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535
>gi|115469704|ref|NP_001058451.1| Os06g0695600 [Oryza sativa Japonica Group]
gi|53791836|dbj|BAD53902.1| putative DNA binding zinc finger protein [Oryza sativa Japonica
Group]
gi|113596491|dbj|BAF20365.1| Os06g0695600 [Oryza sativa Japonica Group]
gi|215694615|dbj|BAG89806.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636148|gb|EEE66280.1| hypothetical protein OsJ_22486 [Oryza sativa Japonica Group]
Length = 579
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 215 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 273
+L +G+ SD+Q+ + L YK +S+LEA + +D +C IC +Y E
Sbjct: 478 LLALEERIGSVSTALSDEQLVKCLKRNVYKLPNSDLEANRAVL--DDAKCSICQEEYIEG 535
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
EEV ++ C H +H+ C+ +WLR + CP+CK
Sbjct: 536 EEVGRMQCEHQYHVSCIHEWLRQKNWCPICK 566
>gi|358337630|dbj|GAA33104.2| RING finger protein 38 [Clonorchis sinensis]
Length = 1239
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 227 KGASDDQISRLPSWRYKRVD---SNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
+G + +++ LP Y ++ + E A D C ICL Y+ K+ +R + C H
Sbjct: 1145 RGLTKEELDTLPVRSYGKIHEAPTQHENTKDCVAETDDRCMICLDDYESKDLLRAMRCRH 1204
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CPLC+ +
Sbjct: 1205 EFHAKCVDKWLKTKRTCPLCRAD 1227
>gi|226504274|ref|NP_001148220.1| RING-H2 finger protein ATL2M [Zea mays]
gi|195616772|gb|ACG30216.1| RING-H2 finger protein ATL2M [Zea mays]
gi|224035457|gb|ACN36804.1| unknown [Zea mays]
gi|414585838|tpg|DAA36409.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
I+ +P+ +Y N EA NS +D +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 67 IAAIPTMKY-----NCEAFNS---KDDVQCSICLGEYREKEILRIIPTCRHSFHLACLDL 118
Query: 293 WLRILSCCPLCKQELE 308
WL + CP+C+ LE
Sbjct: 119 WLEKQTTCPICRVSLE 134
>gi|449464090|ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
gi|449505086|ref|XP_004162372.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 393
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 256 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
P + D C ICL++Y+ KE +R +P C H FH CVD+WL++ + CP+C+
Sbjct: 310 PKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNATCPVCR 359
>gi|413948715|gb|AFW81364.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 346
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 195 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNS 254
+S FL+ + C P SS G I LP +R+ +
Sbjct: 3 FSLTFLVLMYAKFCHPSGSSSTNGAAAAAVCSVGVPKQVIQSLPFFRFATLRG------- 55
Query: 255 APANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
A + EC +CLA++ + + +R LP C H FHL CVD+WL+ + CPLC+ ++
Sbjct: 56 --ARQGMECSVCLARFDDADLLRLLPRCRHAFHLHCVDRWLQSNASCPLCRTSVD 108
>gi|357130197|ref|XP_003566737.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Brachypodium
distachyon]
Length = 382
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A + A + I LP + K V ++ EC ICL +++ EVR
Sbjct: 201 GLYLTTAQREAVEALIQELPKFMLKAVPTDCS-----------ECPICLEEFRVGNEVRG 249
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 250 LPCAHNFHVECIDQWLRLNVKCPRCR 275
>gi|300708549|ref|XP_002996451.1| hypothetical protein NCER_100447 [Nosema ceranae BRL01]
gi|239605755|gb|EEQ82780.1| hypothetical protein NCER_100447 [Nosema ceranae BRL01]
Length = 246
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 48/272 (17%)
Query: 38 AARAGAPSFLIRTAMRISRAST--WMTL-ELLALLVQISIITFTLSISKKESPIWPMRIW 94
+ + + +IR R++ S +M + ELL L +I ITF L + + E+ P++++
Sbjct: 3 VSNSSQTTHIIRNRTRLTALSCIRFMIISELLIKLTKIISITFVLYLKRNETCKQPLKVF 62
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSED-SRFSHLMNKCRTSLEL 153
+ + + ++ + + R FS+ ++ + R + D + FS+ + +L L
Sbjct: 63 LGVFLVITIIRCITFLSKNRTF-------FSIDNIPEFRDNPDLALFSNFIE----ALVL 111
Query: 154 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 213
F W+++G W+ + C + N + Y L
Sbjct: 112 F---WYLIGFHWLQE---------------CTNCSTTNPILYYMSALFI----------- 142
Query: 214 SVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 273
LG M + + + +++ + N + P +E C IC +Y+
Sbjct: 143 -TLGIAMFILPLLAIIALLLLKECVKPKFRIIKFN--KPDDLP-DETVTCTICFEQYEPG 198
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
E++ LPC+H FH CVD+WL + CPLCK+
Sbjct: 199 NEIKFLPCTHHFHCDCVDEWLALKESCPLCKR 230
>gi|413937169|gb|AFW71720.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 226
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A GA + +P+ Y L+A P C ICLA+ + E VR LP C+H
Sbjct: 107 AQAGARRKALRAMPTLVYSAGLLPLQAAGGG----GPVCAICLAELEPGERVRVLPKCNH 162
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FH++CVD+WL S CP C+Q L
Sbjct: 163 GFHVRCVDRWLLARSTCPTCRQPL 186
>gi|326435222|gb|EGD80792.1| hypothetical protein PTSG_01380 [Salpingoeca sp. ATCC 50818]
Length = 341
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK----QELER 309
C +CL +++E + VR+LPC H+FH++C+D+WL+ + CP C+ EL+R
Sbjct: 283 CAVCLQQFEENQHVRRLPCRHVFHVECIDEWLQSVPTCPTCRSNITDELDR 333
>gi|449469529|ref|XP_004152472.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like isoform 1 [Cucumis
sativus]
Length = 348
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 217 GYN--MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKE 274
GY+ + + +A + A + I LP +R K V ++ EC ICL ++
Sbjct: 198 GYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGN 246
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
EVR +PC+H FH++C+D+WLR+ CP C+ +
Sbjct: 247 EVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSV 279
>gi|323450871|gb|EGB06750.1| hypothetical protein AURANDRAFT_28873, partial [Aureococcus
anophagefferens]
Length = 65
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
ED ECCICL +++++E ++KL C H+FHL C+ +WL CP C+Q
Sbjct: 11 EDNECCICLDEFEDEERIKKLRCGHLFHLNCIKKWLLADMRCPTCRQ 57
>gi|168020812|ref|XP_001762936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685748|gb|EDQ72141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
G S +++ LPS+ +K ++ G S C ICL Y E++R LPC H FHL
Sbjct: 197 GMSVKEVNTLPSFVFKHIEDG--KGTSE------TCAICLEDYVAGEKLRLLPCQHEFHL 248
Query: 288 KCVDQWLRILS-CCPLCKQELE 308
C+DQWL CP+CK++ +
Sbjct: 249 DCIDQWLTTRKPFCPVCKRDAQ 270
>gi|30692957|ref|NP_190382.2| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
gi|302595901|sp|Q8GYT9.2|SIS3_ARATH RecName: Full=E3 ubiquitin-protein ligase SIS3; AltName:
Full=Protein SUGAR INSENSITIVE 3; Flags: Precursor
gi|332644833|gb|AEE78354.1| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
Length = 358
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQTEAVEALIQELPKFRLKAV-----------PDDCGECLICLEEFHIGHEVRG 250
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>gi|410913829|ref|XP_003970391.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 578
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAKYKEKEEVRKLPCSH 283
+G + I +LPS+R+ P N E C +C++ ++ ++ +R LPCSH
Sbjct: 499 RGLTKGDIEQLPSYRFN------------PNNHQSEQTLCVVCMSDFESRQLLRVLPCSH 546
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 547 EFHGKCVDKWLRANRTCPICR 567
>gi|17978924|gb|AAL47429.1| AT5g45290/K9E15_7 [Arabidopsis thaliana]
Length = 545
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 258 NEDP-ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
+EDP +C ICL +Y+E + +R LPC H FH CVD+WL+ I CPLC+ ++
Sbjct: 484 SEDPSQCYICLVEYEEADSIRALPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535
>gi|348555449|ref|XP_003463536.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 1
[Cavia porcellus]
Length = 992
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + + +C ICL+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEATEEDTEEKCTICLSIL 947
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|312084983|ref|XP_003144497.1| hypothetical protein LOAG_08919 [Loa loa]
Length = 514
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
KG + ++I +L S+R +E C IC +++++ VR LPC+H FH
Sbjct: 370 KGMTKNEIDQLKSFRVTDPALLMEK----------VCVICQCDFEKRDLVRMLPCAHHFH 419
Query: 287 LKCVDQWLRILSCCPLCKQ 305
LKC+D+WLR CP+C+Q
Sbjct: 420 LKCIDKWLRGNRTCPICRQ 438
>gi|224094300|ref|XP_002310131.1| predicted protein [Populus trichocarpa]
gi|222853034|gb|EEE90581.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 213 SSVLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 271
+L MG G S+D I + L W+Y+ V +ED CCIC Y
Sbjct: 39 EQLLALEEQMGNVSTGLSEDAIVATLKHWKYQAV-------ADGSDSEDEPCCICQEAYA 91
Query: 272 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
+++++ KL C H FH C+ +WL + CP+CK+
Sbjct: 92 DEDDLGKLKCGHDFHFNCIKRWLVEKNNCPICKK 125
>gi|348516947|ref|XP_003445998.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oreochromis
niloticus]
Length = 675
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 621 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 663
>gi|297819412|ref|XP_002877589.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323427|gb|EFH53848.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A A + I LP +R K V + EC ICL ++ EVR
Sbjct: 202 GLYLTPAQAEAVEALIQELPKFRLKAVPDDCG-----------ECLICLEEFHIGHEVRG 250
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>gi|26449875|dbj|BAC42060.1| unknown protein [Arabidopsis thaliana]
Length = 358
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQTEAVEALIQELPKFRLKAV-----------PDDCGECLICLEEFHIGHEVRG 250
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>gi|388495346|gb|AFK35739.1| unknown [Lotus japonicus]
Length = 249
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 244 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
+ DS G+ + ++ C ICL K E VR LPC H FH C+DQWLR CP+C
Sbjct: 168 KQDSEGAEGSIKVSVDELTCTICLEHVKRGELVRNLPCLHQFHANCIDQWLRQQGTCPVC 227
Query: 304 K 304
K
Sbjct: 228 K 228
>gi|115457184|ref|NP_001052192.1| Os04g0185500 [Oryza sativa Japonica Group]
gi|113563763|dbj|BAF14106.1| Os04g0185500 [Oryza sativa Japonica Group]
gi|215694293|dbj|BAG89286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 709
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G + G S+D+I + L W+Y + +E P CCIC +Y E E++ +L
Sbjct: 626 IGYVNTGLSEDKIRTGLKQWKYVSIP--IEE----PLTGVEPCCICQEEYAEGEDMGRLD 679
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQ 305
C H FH C+ QWL I + CP+CK+
Sbjct: 680 CGHDFHTACIKQWLVIKNLCPICKK 704
>gi|383155801|gb|AFG60106.1| Pinus taeda anonymous locus 0_14595_01 genomic sequence
gi|383155810|gb|AFG60115.1| Pinus taeda anonymous locus 0_14595_01 genomic sequence
Length = 138
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 242 YKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSC 299
++ S E G+ A ED CC ICL+ Y+E E VR +P C HMFH C+DQWLR
Sbjct: 46 FRSSKSEREEGSEA---EDKSCCSICLSDYRESEVVRVMPDCGHMFHAVCIDQWLRRHVT 102
Query: 300 CPLCK 304
CPLC+
Sbjct: 103 CPLCR 107
>gi|224124800|ref|XP_002319425.1| predicted protein [Populus trichocarpa]
gi|222857801|gb|EEE95348.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 262 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+C ICL ++ E E+VR LP CSH FH+KC+D+WL + S CPLC+Q L
Sbjct: 81 DCPICLGEFSEGEKVRVLPQCSHGFHVKCIDRWLLLHSSCPLCRQAL 127
>gi|414875730|tpg|DAA52861.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 511
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 237 LPSWRYKRVDSNLEAGNSAPANED-PECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWL 294
+ ++R + D + + S A +C +CL++ + E+VR LP CSH+FH+ C+D WL
Sbjct: 116 VATYRVRGADDDGPSSASDGAGTGTADCAVCLSELADGEKVRALPGCSHVFHVDCIDAWL 175
Query: 295 RILSCCPLCKQEL 307
R + CP+C+ E+
Sbjct: 176 RSRTTCPVCRAEV 188
>gi|38344619|emb|CAE02518.2| OSJNBb0003A12.5 [Oryza sativa Japonica Group]
gi|125589549|gb|EAZ29899.1| hypothetical protein OsJ_13953 [Oryza sativa Japonica Group]
Length = 684
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G + G S+D+I + L W+Y + +E P CCIC +Y E E++ +L
Sbjct: 601 IGYVNTGLSEDKIRTGLKQWKYVSIP--IEE----PLTGVEPCCICQEEYAEGEDMGRLD 654
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQ 305
C H FH C+ QWL I + CP+CK+
Sbjct: 655 CGHDFHTACIKQWLVIKNLCPICKK 679
>gi|393903772|gb|EFO19573.2| hypothetical protein LOAG_08919 [Loa loa]
Length = 508
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
KG + ++I +L S+R +E C IC +++++ VR LPC+H FH
Sbjct: 364 KGMTKNEIDQLKSFRVTDPALLMEK----------VCVICQCDFEKRDLVRMLPCAHHFH 413
Query: 287 LKCVDQWLRILSCCPLCKQ 305
LKC+D+WLR CP+C+Q
Sbjct: 414 LKCIDKWLRGNRTCPICRQ 432
>gi|116317854|emb|CAH65886.1| OSIGBa0148J22.5 [Oryza sativa Indica Group]
gi|116317864|emb|CAH65894.1| OSIGBa0132G14.2 [Oryza sativa Indica Group]
gi|125547379|gb|EAY93201.1| hypothetical protein OsI_15006 [Oryza sativa Indica Group]
Length = 684
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 222 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G + G S+D+I + L W+Y + +E P CCIC +Y E E++ +L
Sbjct: 601 IGYVNTGLSEDKIRTGLKQWKYVSIP--IEE----PLTGVEPCCICQEEYAEGEDMGRLD 654
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQ 305
C H FH C+ QWL I + CP+CK+
Sbjct: 655 CGHDFHTACIKQWLVIKNLCPICKK 679
>gi|440900640|gb|ELR51723.1| E3 ubiquitin-protein ligase RNF6 [Bos grunniens mutus]
Length = 667
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 203 LLLCCCVPLISSVLGYNMNMGAAD---KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 259
L+ +P++ + +N G D G + +QI L + Y+ ++ E G +
Sbjct: 559 LVETGTLPILRLAHFFLLNEGDDDDPTHGLTKEQIDNLSTRNYEHSGADGEPGKA----- 613
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C++ Y ++R+LPC H FH+ C+D+WL CP+C+Q
Sbjct: 614 ---CSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQ 656
>gi|388513249|gb|AFK44686.1| unknown [Lotus japonicus]
Length = 302
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
++ G + I + ++Y + GN+ E +C +CL++++E E +R LP C+
Sbjct: 119 SSSSGLDESLIKSITVFKYSK-------GNNGLVVEGSDCSVCLSEFQENESLRLLPKCN 171
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H FHL C+D WL+ S CPLC+ +
Sbjct: 172 HAFHLPCIDPWLKSHSSCPLCRSNI 196
>gi|50949391|emb|CAB75669.2| hypothetical protein [Homo sapiens]
Length = 178
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 82 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 141
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 142 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 171
>gi|347965741|ref|XP_321788.3| AGAP001358-PA [Anopheles gambiae str. PEST]
gi|333470373|gb|EAA43207.3| AGAP001358-PA [Anopheles gambiae str. PEST]
Length = 778
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + +I +LPS+++ ++ G+ C +C+ ++ ++ +R LPCSH
Sbjct: 694 AKPRGLARPEIDQLPSYKF---NAETHTGDQT------SCVVCMCDFEARQILRVLPCSH 744
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WLR CP+C+
Sbjct: 745 EFHAKCVDKWLRSNRTCPICR 765
>gi|307136233|gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
Length = 275
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 22/97 (22%)
Query: 230 SDDQISRLPSWRYK----------------------RVDSNLEAGNSAPANEDPECCICL 267
S++QI+ LP +YK R DS G++ + ++ C +CL
Sbjct: 159 SEEQINALPVHKYKVSGPQSDSSVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCL 218
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ E +R LPC H FH C+D WLR CP+CK
Sbjct: 219 EQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 255
>gi|443722532|gb|ELU11354.1| hypothetical protein CAPTEDRAFT_180387 [Capitella teleta]
Length = 341
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
C ICL+ +++ +EVR+LPC H+FH+ CVD WL CP+C+ ++E
Sbjct: 259 CTICLSDFEDSDEVRRLPCMHLFHIGCVDTWLSSNRRCPICRVDIE 304
>gi|358414165|ref|XP_003582764.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 1 [Bos
taurus]
Length = 628
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISR--LP-SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R P ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 532 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 591
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 592 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 621
>gi|449449014|ref|XP_004142260.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
Length = 307
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 224 AADKGASDDQISRLPSWRYKR-VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 281
A +G I +P YK+ ++ G EC +CL +++ +E++RK+P C
Sbjct: 78 AEPRGLDPSTIQSIPLINYKKPINETTTTGG--------ECAVCLTEFQTEEQLRKIPIC 129
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
SH+FH+ C+D WL+ S CPLC+ +
Sbjct: 130 SHLFHIDCIDIWLQNNSNCPLCRTSI 155
>gi|297809223|ref|XP_002872495.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318332|gb|EFH48754.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 237
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
N N+ A+ G S D LP YK + +D +C +CLA Y+ +E++++
Sbjct: 77 NNNLSTAELGLSKDVREMLPIVIYKE----------SFTVKDSQCSVCLADYQAEEKLQQ 126
Query: 279 LP-CSHMFHLKCVDQWLRILSCCPLCK 304
+P C H FH++C+D+WL + CPLC+
Sbjct: 127 MPACGHTFHMECIDRWLTSHTTCPLCR 153
>gi|258577977|ref|XP_002543170.1| predicted protein [Uncinocarpus reesii 1704]
gi|237903436|gb|EEP77837.1| predicted protein [Uncinocarpus reesii 1704]
Length = 539
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 211 LISSVLG-YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAK 269
L+SS+LG + + + AS + RL + + N+E G S NE+ C ICL
Sbjct: 422 LLSSLLGPVKPPVASEEDVASAGGLYRLIQYPGSLIAENMEDGTSIRVNENERCLICLCD 481
Query: 270 YKEKEEVRKL-PCSHMFHLKCVDQWLRI-LSCCPLCKQE 306
Y+ +EEVR L C H++H +C+D+WL + CPLC+ E
Sbjct: 482 YEAEEEVRLLAKCRHIYHRECIDEWLTTGRNSCPLCRGE 520
>gi|224143609|ref|XP_002325015.1| predicted protein [Populus trichocarpa]
gi|222866449|gb|EEF03580.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G I LP +R+ + + E EC +CL+K+++ E +R LP C H FH
Sbjct: 91 GIDKTVIESLPFFRFTSLKG---------SREGLECAVCLSKFEDIEILRLLPKCKHAFH 141
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
+ CVDQWL S CPLC++++
Sbjct: 142 INCVDQWLEKHSSCPLCRRKV 162
>gi|145552228|ref|XP_001461790.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429626|emb|CAK94417.1| unnamed protein product [Paramecium tetraurelia]
Length = 225
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 199 FLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 258
FL F+LL C V ++ L + KG I RL + +
Sbjct: 114 FLEFILLYCLVFVLVIALPLLCCLSIYRKGKHLYSIRRLKKYLDSIPPHKYTGSDDTWMK 173
Query: 259 EDPECCICLAKYKEKEEVRKLPCS--HMFHLKCVDQWLRILSCCPLCKQEL 307
ED CCIC+ +Y + E + +LPCS H FH C+ W + + CP+C+Q+L
Sbjct: 174 EDKTCCICMQEYVQHENILQLPCSGQHQFHELCIRNWFNVSTSCPICRQQL 224
>gi|449441410|ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus]
Length = 275
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 22/97 (22%)
Query: 230 SDDQISRLPSWRYK----------------------RVDSNLEAGNSAPANEDPECCICL 267
S++QI+ LP +YK R DS G++ + ++ C +CL
Sbjct: 159 SEEQINALPVHKYKVSGPQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCL 218
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ E +R LPC H FH C+D WLR CP+CK
Sbjct: 219 EQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 255
>gi|224043224|ref|XP_002192257.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Taeniopygia guttata]
Length = 664
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE-DPECCICLAKYKEKEEVRKLPCSHMF 285
+G + +QI L + Y G+ NE C +C+ +Y ++R+LPC+H F
Sbjct: 583 RGLTKEQIDNLSTRNY---------GDVHTENEWSKTCSVCINEYATGNKLRQLPCAHEF 633
Query: 286 HLKCVDQWLRILSCCPLCKQ 305
H+ C+D+WL S CP+C+Q
Sbjct: 634 HIHCIDRWLSENSTCPICRQ 653
>gi|432102802|gb|ELK30276.1| RING finger protein 44 [Myotis davidii]
Length = 457
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LP++R+ DS+ +E C +C + ++ ++ +R LPCSH
Sbjct: 375 AKPRGLTKADIEQLPAYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCSH 425
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 426 EFHTKCVDKWLKANRTCPICRAD 448
>gi|18417809|ref|NP_567877.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15983462|gb|AAL11599.1|AF424605_1 AT4g31450/F3L17_20 [Arabidopsis thaliana]
gi|25141205|gb|AAN73297.1| At4g31450/F3L17_20 [Arabidopsis thaliana]
gi|332660515|gb|AEE85915.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 497
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
ED +C IC +Y +EV +L C H +H+KCV +WLRI S CP+CK E
Sbjct: 444 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAE 493
>gi|330792054|ref|XP_003284105.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
gi|325085919|gb|EGC39317.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
Length = 204
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 228 GASDDQISRLPSWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 284
GA +QI LP + +D+ L +G+S + C ICL ++ + +R LPC H
Sbjct: 119 GAKKEQIDLLPIHHIENQQDLDTFLNSGSSKDLQQ-KVCSICLDEFVVNDLIRTLPCIHH 177
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
+H C+++WL+I S CP+CK E+
Sbjct: 178 YHSDCIEKWLKIKSVCPVCKYEV 200
>gi|238015284|gb|ACR38677.1| unknown [Zea mays]
gi|414585839|tpg|DAA36410.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 168
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
I+ +P+ +Y N EA NS +D +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 37 IAAIPTMKY-----NCEAFNS---KDDVQCSICLGEYREKEILRIIPTCRHSFHLACLDL 88
Query: 293 WLRILSCCPLCKQELE 308
WL + CP+C+ LE
Sbjct: 89 WLEKQTTCPICRVSLE 104
>gi|225446541|ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
Length = 247
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G I LP +++ D+ E G + +C +CL+ +E E R LP C H FH
Sbjct: 85 GLDQSVIDSLPMFKFSENDTQEEGGTT-------DCAVCLSVLEEGEIARLLPNCKHTFH 137
Query: 287 LKCVDQWLRILSCCPLCKQELE 308
+C+D+WL S CP+C+ E E
Sbjct: 138 AECIDKWLGTHSTCPICRTEAE 159
>gi|15225932|ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana]
gi|68565091|sp|O82353.1|ATL67_ARATH RecName: Full=RING-H2 finger protein ATL67
gi|3702333|gb|AAC62890.1| hypothetical protein [Arabidopsis thaliana]
gi|18491265|gb|AAL69457.1| At2g46160/T3F17.19 [Arabidopsis thaliana]
gi|330255556|gb|AEC10650.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana]
Length = 214
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 219 NMNMGAADKGASDDQ--ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 276
N ++ A D DQ I+ P + + + D++ + + D C ICL +YKE E +
Sbjct: 93 NEDLEAGDVVVGLDQAVINSYPKFHFSK-DTSAASSDGFGGGGDTTCSICLCEYKEAEML 151
Query: 277 RKLP-CSHMFHLKCVDQWLRILSCCPLCKQ 305
R +P C H FHL C+D WL++ CP+C+
Sbjct: 152 RMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181
>gi|402579379|gb|EJW73331.1| hypothetical protein WUBG_15762 [Wuchereria bancrofti]
Length = 204
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C IC +++++ VR LPC+H FHLKC+D+WLR CP+C+Q +
Sbjct: 85 CVICQCDFEKRDMVRMLPCAHHFHLKCIDKWLRGNRTCPICRQNV 129
>gi|147777624|emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
Length = 1377
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A G + I + +YK+ D +E +C +CL++++E E +R LP CSH
Sbjct: 1115 ATTGLDEALIKSITLCKYKKGDGLVEG---------TDCSVCLSEFEEDESLRLLPKCSH 1165
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FH++C+D WL+ S CPLC+ +
Sbjct: 1166 AFHVQCIDTWLKSHSNCPLCRANI 1189
>gi|118084993|ref|XP_417129.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Gallus gallus]
Length = 672
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 231 DDQISRLPSWRYKRVDSNLEAGNSAPANEDPE----CCICLAKYKEKEEVRKLPCSHMFH 286
DD+ RL +++D NL N + + E C +C+ +Y ++R+LPC H FH
Sbjct: 584 DDEDERLRGLTKEQID-NLSTRNYGDIHTEEEISKTCSVCINEYVTGNKLRQLPCMHEFH 642
Query: 287 LKCVDQWLRILSCCPLCKQ 305
+ C+D+WL S CP+C+Q
Sbjct: 643 IHCIDRWLSENSTCPICRQ 661
>gi|224132906|ref|XP_002321438.1| predicted protein [Populus trichocarpa]
gi|222868434|gb|EEF05565.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 256 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELER 309
P +D C ICL +YK KE ++ +P C H FH C+D+WLR+ + CP+C+ ER
Sbjct: 324 PKPDDNTCSICLCEYKPKETLKTIPECKHCFHSDCIDEWLRLNASCPICRNSPER 378
>gi|212723708|ref|NP_001131721.1| uncharacterized protein LOC100193086 [Zea mays]
gi|195653067|gb|ACG46001.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 249
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 169 IGTQSKGLPESVIALLPTSTYK-------TGIFSRKEKHDECVICCMAYKNRDRLTKLPC 221
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H CV +WL+I CP+C +E+
Sbjct: 222 GHHYHQACVAKWLQINKVCPVCNKEV 247
>gi|116283986|gb|AAH17878.1| RNF13 protein [Homo sapiens]
Length = 291
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 14/125 (11%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLC 303
CP+C
Sbjct: 277 TCPVC 281
>gi|115459386|ref|NP_001053293.1| Os04g0511600 [Oryza sativa Japonica Group]
gi|38345315|emb|CAE03385.2| OSJNBa0004N05.9 [Oryza sativa Japonica Group]
gi|113564864|dbj|BAF15207.1| Os04g0511600 [Oryza sativa Japonica Group]
gi|116311076|emb|CAH68006.1| OSIGBa0157K09-H0214G12.17 [Oryza sativa Indica Group]
Length = 730
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
GAS+ QI+ LP + SN+E +P C +CL + +R+LPC HMFH
Sbjct: 663 GASESQINNLP---QSVIQSNIE---------EP-CAVCLDNPSIGDTIRRLPCFHMFHK 709
Query: 288 KCVDQWLRILSCCPLCK 304
+C+D+WLR CP+CK
Sbjct: 710 ECIDEWLRRKKLCPVCK 726
>gi|15228395|ref|NP_187702.1| RING-H2 finger protein ATL72 [Arabidopsis thaliana]
gi|68565331|sp|Q9SG96.1|ATL72_ARATH RecName: Full=RING-H2 finger protein ATL72
gi|6630539|gb|AAF19558.1|AC011708_1 putative RING zinc finger protein [Arabidopsis thaliana]
gi|28466857|gb|AAO44037.1| At3g10910 [Arabidopsis thaliana]
gi|110735947|dbj|BAE99948.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|332641448|gb|AEE74969.1| RING-H2 finger protein ATL72 [Arabidopsis thaliana]
Length = 181
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 212 ISSVLGYNMNMG--AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAK 269
+S+ N N+G AA G + ++P Y +++A EC ICL
Sbjct: 70 VSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKA---------TECLICLGD 120
Query: 270 YKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+++ E+VR LP C+H FH++C+D WL S CP C+Q L
Sbjct: 121 FEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>gi|224107873|ref|XP_002314635.1| predicted protein [Populus trichocarpa]
gi|222863675|gb|EEF00806.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKEEVRKLP-CSH 283
+G + I +P +++K+ E N E EC +CL +++E E++R++P CSH
Sbjct: 85 RGLDESVIRSIPVFKFKK-----EGNNVRNVGERSFCECAVCLNEFQEAEKLRRIPNCSH 139
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
+FH+ C+D WL+ + CPLC+ +
Sbjct: 140 VFHIDCIDVWLQSNANCPLCRTSI 163
>gi|116789665|gb|ABK25333.1| unknown [Picea sitchensis]
Length = 413
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G + I +P ++YKR D ++ +C +CL+++ E + VR LP C+H FH
Sbjct: 122 GLEESTIRSIPVYKYKRGDGLVDCT---------DCSVCLSEFHEDDSVRLLPKCNHAFH 172
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
+ C+D WL S CPLC+ +
Sbjct: 173 VPCIDTWLNSHSNCPLCRANI 193
>gi|218195198|gb|EEC77625.1| hypothetical protein OsI_16613 [Oryza sativa Indica Group]
gi|222629194|gb|EEE61326.1| hypothetical protein OsJ_15437 [Oryza sativa Japonica Group]
Length = 713
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
GAS+ QI+ LP + SN+E +P C +CL + +R+LPC HMFH
Sbjct: 646 GASESQINNLP---QSVIQSNIE---------EP-CAVCLDNPSIGDTIRRLPCFHMFHK 692
Query: 288 KCVDQWLRILSCCPLCK 304
+C+D+WLR CP+CK
Sbjct: 693 ECIDEWLRRKKLCPVCK 709
>gi|147821210|emb|CAN66450.1| hypothetical protein VITISV_043084 [Vitis vinifera]
Length = 366
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
DP C +C +Y+ EEVR++PC+H++H C+ WLRI + CP+C+ EL+
Sbjct: 200 DPCCPVCKEEYQAGEEVREMPCNHLYHSDCIVPWLRIHNSCPVCRYELQ 248
>gi|145531749|ref|XP_001451641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419296|emb|CAK84244.1| unnamed protein product [Paramecium tetraurelia]
Length = 469
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 211 LISSVLGYNMNMG-AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLA 268
L+++ + N N + G D +I +LP + NLE +ED +C ICL
Sbjct: 376 LLNTFIQLNENGTIEGNLGCEDHEIQQLPVRKI-----NLEQ--VKQLDEDHMKCLICLC 428
Query: 269 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+Y+E++ V+ +PC H FH C+++WL+ CP+CK ELE
Sbjct: 429 EYEEEDLVKTIPCLHYFHDDCIEKWLKKSRHCPICKNELE 468
>gi|357165351|ref|XP_003580354.1| PREDICTED: uncharacterized protein LOC100831396 [Brachypodium
distachyon]
Length = 252
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 222 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G KG DD I L S YK R+ S E + EC IC YK ++++ LP
Sbjct: 171 IGTESKGLPDDMIMLLKSSTYKIRIFSRKEKHD--------ECVICCMAYKNRDKLTTLP 222
Query: 281 CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H +H CV +WL+I CP+C +E+
Sbjct: 223 CEHQYHQICVTKWLKINKVCPVCNKEV 249
>gi|242081951|ref|XP_002445744.1| hypothetical protein SORBIDRAFT_07g024950 [Sorghum bicolor]
gi|241942094|gb|EES15239.1| hypothetical protein SORBIDRAFT_07g024950 [Sorghum bicolor]
Length = 314
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 14/89 (15%)
Query: 222 MGAADKGASDDQISRLPSWRY---KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G KG + D I+ LPS Y + D N+E +C IC ++ E E +
Sbjct: 226 VGTESKGLAADTIASLPSVTYHAQDKQDGNME-----------QCVICRVEFDEGESLVA 274
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
LPC H +H +C++QWL++ CP+C E+
Sbjct: 275 LPCKHPYHSECINQWLQLNKVCPMCSAEV 303
>gi|194692338|gb|ACF80253.1| unknown [Zea mays]
Length = 249
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 169 IGTQSKGLPESVIALLPTSTYK-------TGIFSRKEKHDECVICCMAYKNRDRLTKLPC 221
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H CV +WL+I CP+C +E+
Sbjct: 222 GHHYHQACVAKWLQINKVCPVCNKEV 247
>gi|376335797|gb|AFB32558.1| hypothetical protein 0_15036_01, partial [Pinus mugo]
Length = 134
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 193 LSYSFPFLLFLLLCC--CVPLISSVLGYN---------MNMGAADKGASDDQISRLPSWR 241
+S + +L +LLC C+ ++S++ ++ M A+ G +D I LPS
Sbjct: 22 MSENMILILLVLLCTVICLMGLASIIPWDKIWRSCHDHMATRRANTGMNDKSIEALPSII 81
Query: 242 YKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCC 300
Y + L +C ICLA + E E VR LP C+H FH CVD+WLR S C
Sbjct: 82 YGKSMQQLAT----------DCAICLADFVEGEAVRVLPSCNHGFHTGCVDKWLRSHSSC 131
Query: 301 PLC 303
P C
Sbjct: 132 PTC 134
>gi|363739122|ref|XP_003642121.1| PREDICTED: RING finger protein 44-like [Gallus gallus]
Length = 498
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 416 AKPRGLTKADIEHLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 466
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 467 EFHAKCVDKWLKANRTCPICRAD 489
>gi|356513598|ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 382
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 284
A + A + I LP +R K V ++ EC ICL ++ EVR LPC+H
Sbjct: 208 AQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFYVGNEVRGLPCAHN 256
Query: 285 FHLKCVDQWLRILSCCPLCK 304
FH++C+D+WLR+ CP C+
Sbjct: 257 FHVECIDEWLRLNVKCPRCR 276
>gi|224067536|ref|XP_002197442.1| PREDICTED: RING finger protein 44 [Taeniopygia guttata]
Length = 442
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 360 AKPRGLTKADIEHLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 410
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 411 EFHAKCVDKWLKANRTCPICRAD 433
>gi|449433165|ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
Length = 382
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 10/68 (14%)
Query: 241 RYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSC 299
+YKR D +E +C +CL++++E E +R LP CSH FHL C+D WL+ S
Sbjct: 131 KYKRGDGLVEG---------TDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 181
Query: 300 CPLCKQEL 307
CPLC+ +
Sbjct: 182 CPLCRSNI 189
>gi|395822251|ref|XP_003784435.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Otolemur
garnettii]
Length = 993
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|348575005|ref|XP_003473280.1| PREDICTED: RING finger protein 44-like [Cavia porcellus]
Length = 432
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-ADSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHAKCVDKWLKANRTCPICRAD 423
>gi|218198816|gb|EEC81243.1| hypothetical protein OsI_24310 [Oryza sativa Indica Group]
Length = 540
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 215 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 273
+L +G+ SD+Q+ + L YK +S+LEA + +D +C IC +Y E
Sbjct: 439 LLALEERIGSVSTALSDEQLVKCLKRNVYKLPNSDLEANRAVL--DDAKCSICQEEYIEG 496
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
EEV ++ C H +H+ C+ +WLR + CP+CK
Sbjct: 497 EEVGRMQCEHQYHVPCIHEWLRQKNWCPICK 527
>gi|348514454|ref|XP_003444755.1| PREDICTED: hypothetical protein LOC100696086 [Oreochromis
niloticus]
Length = 1005
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 30/126 (23%)
Query: 197 FPFLLFLLLCCCVPLIS--------------SVLGYNMNMGAAD-KGASDDQISRLPSWR 241
P+ L +L P IS ++L +G A +G + I +LPS+R
Sbjct: 881 LPYFLSMLPVQPGPAISLELDVDDGEVENYEALLNLAERLGEAKLRGLTKGDIEQLPSYR 940
Query: 242 YKRVDSNLEAGNSAPANEDPE---CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 298
+ P N E C +C++ ++ ++ +R LPCSH FH KCVD+WLR
Sbjct: 941 FN------------PNNHQSEQTLCVVCMSDFESRQLLRVLPCSHEFHGKCVDKWLRANR 988
Query: 299 CCPLCK 304
CP+C+
Sbjct: 989 TCPICR 994
>gi|119597961|gb|EAW77555.1| ring finger protein 111, isoform CRA_b [Homo sapiens]
gi|119597966|gb|EAW77560.1| ring finger protein 111, isoform CRA_b [Homo sapiens]
Length = 917
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISR--LP-SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R P ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 821 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 880
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 881 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 910
>gi|390468395|ref|XP_002753235.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Callithrix jacchus]
Length = 594
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 498 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 557
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 558 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 587
>gi|5262756|emb|CAB45904.1| putative protein [Arabidopsis thaliana]
gi|7270048|emb|CAB79863.1| putative protein [Arabidopsis thaliana]
Length = 488
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
ED +C IC +Y +EV +L C H +H+KCV +WLRI S CP+CK E
Sbjct: 435 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAE 484
>gi|426379251|ref|XP_004056315.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Gorilla
gorilla gorilla]
Length = 995
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|426233216|ref|XP_004010613.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Ovis
aries]
Length = 995
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|402873505|ref|XP_003900614.1| PREDICTED: RING finger protein 44 isoform 1 [Papio anubis]
Length = 432
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFETRQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|242014475|ref|XP_002427915.1| RING finger protein, putative [Pediculus humanus corporis]
gi|212512399|gb|EEB15177.1| RING finger protein, putative [Pediculus humanus corporis]
Length = 560
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCI-CLAKYKEKEEVRKLPCS 282
A +G +I +LPS+++ N+E S D CC+ C+ ++ ++ +R LPCS
Sbjct: 471 AKPRGLFRAEIEQLPSYKF-----NVENHQS-----DQTCCVVCMCDFEPRQSLRVLPCS 520
Query: 283 HMFHLKCVDQWLRILSCCPLCK 304
H FH KCVD+WL+ CP+C+
Sbjct: 521 HEFHAKCVDKWLKGNRTCPICR 542
>gi|357512347|ref|XP_003626462.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
gi|355501477|gb|AES82680.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
Length = 249
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A G + I +PS+ Y S E + EC +CL +Y++ + +R LP CSH
Sbjct: 64 APHGLDESVIYAIPSFIYTTTKSEQEEESRG------ECVVCLEEYEDNDHIRILPFCSH 117
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FHL C+D WLR CPLC+
Sbjct: 118 TFHLNCIDVWLRSNPSCPLCR 138
>gi|332263048|ref|XP_003280568.1| PREDICTED: RING finger protein 44 [Nomascus leucogenys]
Length = 423
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ ++G + C +C + ++ ++ +R LPC+H
Sbjct: 341 AKPRGLTKADIEQLPSYRFN-PDSH-QSGQTL-------CVVCFSDFEARQLLRVLPCNH 391
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 392 EFHTKCVDKWLKANRTCPICRAD 414
>gi|47222931|emb|CAF99087.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 633 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 675
>gi|426351155|ref|XP_004043123.1| PREDICTED: RING finger protein 44 [Gorilla gorilla gorilla]
Length = 413
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 331 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 381
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 382 EFHTKCVDKWLKANRTCPICRAD 404
>gi|15233725|ref|NP_192651.1| putative RING-H2 finger protein ATL36 [Arabidopsis thaliana]
gi|68565318|sp|Q9M0R5.1|ATL36_ARATH RecName: Full=Putative RING-H2 finger protein ATL36; Flags:
Precursor
gi|7267555|emb|CAB78036.1| putative protein [Arabidopsis thaliana]
gi|332657324|gb|AEE82724.1| putative RING-H2 finger protein ATL36 [Arabidopsis thaliana]
Length = 345
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 199 FLLFLLLCCCVPLI-----SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGN 253
F+ ++ CC+ I G ++ A +G + I P++ Y V L+ G
Sbjct: 60 FISLGMVSCCLHCIFYREEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVK-GLKIGK 118
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
EC ICL++++++E +R +P CSH FH C+D WL S CP+C+ L
Sbjct: 119 GGV-----ECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANL 168
>gi|397515419|ref|XP_003827949.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Pan
paniscus]
Length = 993
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|335283091|ref|XP_003354234.1| PREDICTED: RING finger protein 44 isoform 2 [Sus scrofa]
Length = 351
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 269 AKPRGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 319
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|332235798|ref|XP_003267091.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Nomascus
leucogenys]
Length = 995
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|298204570|emb|CBI23845.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 260 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
DP C +C +Y+ EEVR++PC+H++H C+ WLRI + CP+C+ EL+
Sbjct: 200 DPCCPVCKEEYRAGEEVREMPCNHLYHSDCIVPWLRIHNSCPVCRYELQ 248
>gi|242074038|ref|XP_002446955.1| hypothetical protein SORBIDRAFT_06g025850 [Sorghum bicolor]
gi|241938138|gb|EES11283.1| hypothetical protein SORBIDRAFT_06g025850 [Sorghum bicolor]
Length = 247
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 167 IGTESKGLPESVIALLPTSTYK-------IGIFSRKEKHEECVICCMSYKNRDRLTKLPC 219
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H CV +WL+I CP+C +E+
Sbjct: 220 GHQYHQACVAKWLQINKVCPVCNKEV 245
>gi|7662486|ref|NP_055716.1| RING finger protein 44 [Homo sapiens]
gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full=RING finger protein 44
gi|24980826|gb|AAH39833.1| Ring finger protein 44 [Homo sapiens]
gi|38969938|gb|AAH63297.1| Ring finger protein 44 [Homo sapiens]
gi|119605477|gb|EAW85071.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|119605478|gb|EAW85072.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|168269688|dbj|BAG09971.1| RING finger protein 44 [synthetic construct]
Length = 432
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|355716966|gb|AES05780.1| ring finger protein 44 [Mustela putorius furo]
Length = 431
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|297791661|ref|XP_002863715.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309550|gb|EFH39974.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 682
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 228 GASDDQIS-RLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 286
G +++ IS RL +YK + +P + +P CCIC +Y E E++ L C H FH
Sbjct: 600 GVNEETISNRLKQRKYK-------SNTKSPQDTEP-CCICQEEYNEGEDMGTLECGHEFH 651
Query: 287 LKCVDQWLRILSCCPLCK 304
+C+ +WL+ + CP+CK
Sbjct: 652 SQCIKEWLKQKNLCPICK 669
>gi|15227839|ref|NP_179337.1| RING-H2 finger protein ATL44 [Arabidopsis thaliana]
gi|51316192|sp|O22755.1|ATL44_ARATH RecName: Full=RING-H2 finger protein ATL44; AltName: Full=RING-H2
zinc finger protein RHA3a
gi|13877953|gb|AAK44054.1|AF370239_1 putative RING zinc finger protein [Arabidopsis thaliana]
gi|3790573|gb|AAC68673.1| RING-H2 finger protein RHA3a [Arabidopsis thaliana]
gi|4914367|gb|AAD32903.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|17065626|gb|AAL33807.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330251537|gb|AEC06631.1| RING-H2 finger protein ATL44 [Arabidopsis thaliana]
Length = 185
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
+KG + LP + +S +G +A + EC ICL + + EE+R LP C H
Sbjct: 67 NKGLKKKALQSLPRSTFTAAEST--SGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHS 124
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FH++C+D+WL S CP C++ L
Sbjct: 125 FHVECIDKWLVSRSSCPSCRRIL 147
>gi|431895957|gb|ELK05375.1| E3 ubiquitin-protein ligase Arkadia [Pteropus alecto]
Length = 1100
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1047 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 1093
>gi|397470558|ref|XP_003806886.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Pan
paniscus]
Length = 432
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|351703763|gb|EHB06682.1| RING finger protein 115 [Heterocephalus glaber]
Length = 306
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 188 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YKRV 245
+W+ + +S P +++ +LG N G A ++I+ LP+ ++V
Sbjct: 167 FSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQEQV 224
Query: 246 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
D+ LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C++
Sbjct: 225 DTGLE------------CPVCKDDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRK 272
Query: 306 EL 307
L
Sbjct: 273 SL 274
>gi|297819418|ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323430|gb|EFH53851.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 366
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G I LP + Y V +L+ E +C +CL ++ + +++R LP CSH
Sbjct: 175 DSGLDQTSIDALPVFLYGNVTMSLK--------ESFDCAVCLNEFSDTDKLRLLPVCSHA 226
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FHL C+D WL S CPLC++ L
Sbjct: 227 FHLHCIDTWLLSNSTCPLCRRSL 249
>gi|359491594|ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
Length = 146
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 223 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 281
G+ G S D++ +LP + YK V LE +++P +C +CL +++ ++ R LP C
Sbjct: 43 GSGGLGMSQDELKKLPCFEYKAV--ALEKASNSPV----DCAVCLENFRKGDKCRLLPNC 96
Query: 282 SHMFHLKCVDQWLRILSCCPLCK 304
H FH +C+D WL CP+C+
Sbjct: 97 KHFFHSQCIDSWLLKTPICPICR 119
>gi|350583443|ref|XP_003481520.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Sus scrofa]
Length = 293
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS--WRYK 243
S +W+ + +S P +++ +LG N G A ++I+ LP+ +
Sbjct: 152 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTITQE 209
Query: 244 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
+VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C
Sbjct: 210 QVDKGLE------------CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDACPVC 257
Query: 304 KQEL 307
++ L
Sbjct: 258 RKSL 261
>gi|301096647|ref|XP_002897420.1| RING Finger Ubiquitin ligase, putative [Phytophthora infestans
T30-4]
gi|262107111|gb|EEY65163.1| RING Finger Ubiquitin ligase, putative [Phytophthora infestans
T30-4]
Length = 346
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 233 QISRLPSWRYKRVDSNLEAGNSAPANE--DPECCICLAKYKEKEEVRKLPCSHMFHLKCV 290
QI LP++ Y+ V ++E + E + C +C +++ +EEVR LPC H +H +C+
Sbjct: 268 QIIALPTFNYQ-VREHVEKNQTEEGGEVNNTVCAVCCDEFEAEEEVRALPCLHFYHRECI 326
Query: 291 DQWLRILSCCPLCKQ 305
DQWL CP+CK
Sbjct: 327 DQWLMCHRQCPICKH 341
>gi|194692670|gb|ACF80419.1| unknown [Zea mays]
gi|414866069|tpg|DAA44626.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 207
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
G S +S S ++ D G S P+ ++ C +CL + + +R LPC H FH+
Sbjct: 110 GPSQLSVSSTGSGNEEKQDGLKADGTSKPSEDELTCSVCLEQVTVGDLLRSLPCLHQFHV 169
Query: 288 KCVDQWLRILSCCPLCKQEL 307
C+D WLR CP+CK ++
Sbjct: 170 NCIDPWLRQQGTCPICKHQV 189
>gi|395455081|ref|NP_001257457.1| E3 ubiquitin-protein ligase Arkadia isoform 1 [Homo sapiens]
gi|119597967|gb|EAW77561.1| ring finger protein 111, isoform CRA_f [Homo sapiens]
Length = 995
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|114657305|ref|XP_001172697.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Pan
troglodytes]
Length = 995
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|109081311|ref|XP_001098035.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 3 [Macaca
mulatta]
Length = 993
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|281343329|gb|EFB18913.1| hypothetical protein PANDA_019185 [Ailuropoda melanoleuca]
Length = 344
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+ DQ+ ++P+ Y++ D + C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKDQLKQIPTHDYQKGD------------QYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 256
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
>gi|343962063|dbj|BAK62619.1| RING finger protein 13 [Pan troglodytes]
Length = 180
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Query: 232 DQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
DQ+ +LP ++K+ D E C ICL +Y++ +++R LPCSH +H KCVD
Sbjct: 20 DQLKKLPVHKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVD 67
Query: 292 QWL-RILSCCPLCKQEL 307
WL + CP+CKQ++
Sbjct: 68 PWLTKTKKTCPVCKQKV 84
>gi|395822247|ref|XP_003784433.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Otolemur
garnettii]
Length = 984
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|432094725|gb|ELK26205.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 795
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
C IC+ +Y E ++R LPCSH +H+ C+D+WL S CP+C++E+
Sbjct: 747 CIICITEYTEGNKLRILPCSHEYHVHCIDRWLSDNSTCPICRREV 791
>gi|402873507|ref|XP_003900615.1| PREDICTED: RING finger protein 44 isoform 2 [Papio anubis]
Length = 351
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 269 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFETRQLLRVLPCNH 319
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|426379247|ref|XP_004056313.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Gorilla
gorilla gorilla]
Length = 986
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|410040033|ref|XP_001136491.3| PREDICTED: RING finger protein 44 isoform 2 [Pan troglodytes]
Length = 430
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 348 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 398
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 399 EFHTKCVDKWLKANRTCPICRAD 421
>gi|326490868|dbj|BAJ90101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 298
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 247 SNLEAGNSA---PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPL 302
+ L AG+ + PA E+ +C +CL +Y+ K+ VR LP C H FH C+D WLR CP+
Sbjct: 86 AKLGAGDDSRRPPAQEESQCTVCLEEYEAKDVVRVLPYCGHAFHAACIDTWLRHHPTCPI 145
Query: 303 CK 304
C+
Sbjct: 146 CR 147
>gi|194379472|dbj|BAG63702.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 269 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 319
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|168015517|ref|XP_001760297.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688677|gb|EDQ75053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 183
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 251 AGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
A + P +D C ICL YK+ + +R LP C HMFH C+D WLR+ + CP+C+
Sbjct: 98 ASQALPHLQDTSCSICLGDYKDGDTLRMLPECRHMFHALCIDAWLRLHASCPMCR 152
>gi|73953315|ref|XP_546217.2| PREDICTED: RING finger protein 44 isoform 1 [Canis lupus
familiaris]
Length = 431
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 349 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 399
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 400 EFHTKCVDKWLKANRTCPICRAD 422
>gi|242036907|ref|XP_002465848.1| hypothetical protein SORBIDRAFT_01g046940 [Sorghum bicolor]
gi|241919702|gb|EER92846.1| hypothetical protein SORBIDRAFT_01g046940 [Sorghum bicolor]
Length = 317
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 250 EAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+AG AP EC +CL+++ E+E VR LP CSH FH+ C+D WL+ + CP C+ ++
Sbjct: 121 DAGGLAPRISVSECAVCLSEFVERERVRLLPNCSHAFHIDCIDTWLQGSARCPFCRSDV 179
>gi|300794460|ref|NP_001179642.1| RING finger protein 44 [Bos taurus]
gi|296485561|tpg|DAA27676.1| TPA: ring finger protein 44 [Bos taurus]
Length = 432
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|110741108|dbj|BAE98648.1| hypothetical protein [Arabidopsis thaliana]
Length = 390
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 259 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
ED +C IC +Y +EV +L C H +H+KCV +WLRI S CP+CK E
Sbjct: 337 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAE 386
>gi|49388302|dbj|BAD25417.1| hypothetical protein [Oryza sativa Japonica Group]
gi|49388472|dbj|BAD25599.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 258
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G ++ P+ ++ S A A A E+ +C +CL +Y+ K+ VR LP C H F
Sbjct: 74 RGLEPAVVTSFPTAKFGDGGSRPRA---AAALEESQCPVCLEEYEAKDVVRVLPSCGHAF 130
Query: 286 HLKCVDQWLRILSCCPLCKQEL 307
H+ C+D WLR S CP+C+ L
Sbjct: 131 HVACIDAWLRQHSTCPVCRASL 152
>gi|15228322|ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thaliana]
gi|68565188|sp|Q7X843.2|ATL48_ARATH RecName: Full=RING-H2 finger protein ATL48; AltName:
Full=YGHL1-C3HC4 RING fusion protein
gi|4678325|emb|CAB41136.1| putative protein [Arabidopsis thaliana]
gi|30038524|dbj|BAC75820.1| YGHL1-C3HC4 RING fusion protein [Arabidopsis thaliana]
gi|332644837|gb|AEE78358.1| RING-H2 finger protein ATL48 [Arabidopsis thaliana]
Length = 349
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G I LP + Y V +LE + +C +CL ++ + +++R LP CSH
Sbjct: 178 DSGLDQTAIDALPVFLYGNVTISLE--------QPFDCAVCLNEFSDTDKLRLLPVCSHA 229
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FHL C+D WL S CPLC++ L
Sbjct: 230 FHLHCIDTWLLSNSTCPLCRRSL 252
>gi|115449247|ref|NP_001048403.1| Os02g0798600 [Oryza sativa Japonica Group]
gi|51091322|dbj|BAD36057.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113537934|dbj|BAF10317.1| Os02g0798600 [Oryza sativa Japonica Group]
gi|222623853|gb|EEE57985.1| hypothetical protein OsJ_08736 [Oryza sativa Japonica Group]
Length = 389
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 10/76 (13%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
++ LP YK+ +A ++D E C ICL +Y++ +++R LPC H FHL CVD+
Sbjct: 317 VNSLPCKSYKK--------QTAQCSDDMEQCHICLTEYEDGDQIRSLPCKHEFHLLCVDK 368
Query: 293 WLR-ILSCCPLCKQEL 307
WL+ + CPLC+ ++
Sbjct: 369 WLKEVHRVCPLCRGDV 384
>gi|242036905|ref|XP_002465847.1| hypothetical protein SORBIDRAFT_01g046930 [Sorghum bicolor]
gi|241919701|gb|EER92845.1| hypothetical protein SORBIDRAFT_01g046930 [Sorghum bicolor]
Length = 317
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 209 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLA 268
V +S+V + G D ++ LP RY R A +SA A+E C +CL
Sbjct: 83 VERVSAVFFTDHEAAELPGGLDPDVVAALPVVRYHR----RRAKDSASASE---CAVCLG 135
Query: 269 KYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
++ E +++LP CSH FH+ C+D WL CPLC+
Sbjct: 136 EFAPGERLKQLPTCSHAFHIDCIDTWLHHNVSCPLCR 172
>gi|168066815|ref|XP_001785327.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663082|gb|EDQ49868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 80
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 259 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
ED EC +CL K+ E E +R LP CSH+FH +C+D W S CPLC+ L+
Sbjct: 28 EDLECAVCLEKFNEDEALRLLPQCSHVFHTECIDLWFHSHSTCPLCRMSLK 78
>gi|147858036|emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]
Length = 209
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G + LP ++K+ N P++ + +C +CL +++E E ++ LP CSH+F
Sbjct: 32 RGLDSSTVYSLPIAQFKK--------NEGPSHSNTDCAVCLGEFEEGEFLKHLPNCSHVF 83
Query: 286 HLKCVDQWLRILSCCPLCKQEL 307
H+ C+D W S CPLC+ +
Sbjct: 84 HIPCIDTWFESHSNCPLCRSHV 105
>gi|311249623|ref|XP_003123707.1| PREDICTED: RING finger protein 44 isoform 1 [Sus scrofa]
Length = 432
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|359807415|ref|NP_001240876.1| uncharacterized protein LOC100780922 [Glycine max]
gi|255641268|gb|ACU20911.1| unknown [Glycine max]
Length = 193
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 259 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
E +C ICLA YKE+E +R +P C H FHL C+D WLR S CP+C+
Sbjct: 86 EHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCR 132
>gi|255082784|ref|XP_002504378.1| ring-h2 finger protein [Micromonas sp. RCC299]
gi|226519646|gb|ACO65636.1| ring-h2 finger protein [Micromonas sp. RCC299]
Length = 341
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+G KG + + I LP RY +AP E+ +C ICL++++E +E ++P
Sbjct: 246 QIGTQSKGLAPEVIDALPVRRYT-------CAGTAPGREEEKCMICLSEFEEGDEAARVP 298
Query: 281 -CSHMFHLKCVDQWLRILSCCPLCKQELE 308
C H +H C+ WL CCP+CK E++
Sbjct: 299 KCGHEYHRGCLTPWLGDNKCCPICKTEID 327
>gi|37595553|ref|NP_060080.6| E3 ubiquitin-protein ligase Arkadia isoform 2 [Homo sapiens]
gi|119597962|gb|EAW77556.1| ring finger protein 111, isoform CRA_c [Homo sapiens]
gi|119597963|gb|EAW77557.1| ring finger protein 111, isoform CRA_c [Homo sapiens]
Length = 986
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|397515415|ref|XP_003827947.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Pan
paniscus]
Length = 984
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|301787345|ref|XP_002929081.1| PREDICTED: e3 ubiquitin-protein ligase RNF167-like [Ailuropoda
melanoleuca]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+ DQ+ ++P+ Y++ D + C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKDQLKQIPTHDYQKGD------------QYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 256
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
>gi|218191753|gb|EEC74180.1| hypothetical protein OsI_09301 [Oryza sativa Indica Group]
Length = 520
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 10/76 (13%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 292
++ LP YK+ +A ++D E C ICL +Y++ +++R LPC H FHL CVD+
Sbjct: 448 VNSLPCKSYKK--------QTAQCSDDMEQCHICLTEYEDGDQIRSLPCKHEFHLLCVDK 499
Query: 293 WLR-ILSCCPLCKQEL 307
WL+ + CPLC+ ++
Sbjct: 500 WLKEVHRVCPLCRGDV 515
>gi|395455083|ref|NP_001257458.1| E3 ubiquitin-protein ligase Arkadia isoform 3 [Homo sapiens]
gi|119597968|gb|EAW77562.1| ring finger protein 111, isoform CRA_g [Homo sapiens]
Length = 985
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|40789045|dbj|BAA83052.2| KIAA1100 protein [Homo sapiens]
Length = 444
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 362 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 412
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 413 EFHTKCVDKWLKANRTCPICRAD 435
>gi|449457941|ref|XP_004146706.1| PREDICTED: uncharacterized protein LOC101215855 [Cucumis sativus]
gi|449505397|ref|XP_004162456.1| PREDICTED: uncharacterized protein LOC101226984 [Cucumis sativus]
Length = 541
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 257 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
+E +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+ ++
Sbjct: 471 GDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDV 522
>gi|125524889|gb|EAY73003.1| hypothetical protein OsI_00875 [Oryza sativa Indica Group]
Length = 184
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A G S I+ LP++ Y+ + +C +CL + E+VR+LP C
Sbjct: 69 ANSHGMSAAAIAALPTFGYEASAAAAAL----------DCAVCLGQVDAGEKVRQLPKCG 118
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH +CVD WLR S CP+C+ +E
Sbjct: 119 HLFHAECVDGWLRAHSTCPMCRAAVE 144
>gi|52545897|emb|CAD39147.2| hypothetical protein [Homo sapiens]
Length = 354
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 272 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 322
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 323 EFHTKCVDKWLKANRTCPICRAD 345
>gi|38173842|gb|AAH60862.1| Ring finger protein 111 [Homo sapiens]
Length = 985
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|387273413|gb|AFJ70201.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 984
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|380813986|gb|AFE78867.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
gi|383419407|gb|AFH32917.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 984
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|344265309|ref|XP_003404727.1| PREDICTED: RING finger protein 44 [Loxodonta africana]
Length = 432
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|302755246|ref|XP_002961047.1| hypothetical protein SELMODRAFT_71236 [Selaginella moellendorffii]
gi|300171986|gb|EFJ38586.1| hypothetical protein SELMODRAFT_71236 [Selaginella moellendorffii]
Length = 291
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
G + ++ LP++ Y+R + ++ C IC+ +Y++ +++R LPC H FH
Sbjct: 202 GLTSSEVRSLPTFVYRRAGDGDDQADT--------CVICMEEYEDGQKLRVLPCRHAFHA 253
Query: 288 KCVDQWLRILS-CCPLCKQE 306
CVDQWL CP+CK++
Sbjct: 254 ACVDQWLVTRKPFCPVCKRD 273
>gi|357512351|ref|XP_003626464.1| hypothetical protein MTR_7g116200 [Medicago truncatula]
gi|355501479|gb|AES82682.1| hypothetical protein MTR_7g116200 [Medicago truncatula]
Length = 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A +G + I+ +PS+ Y N+ +E C +CL ++K+ + VR LP CSH
Sbjct: 65 APQGLHEFVINLIPSFIY----------NTTTKSEQETCSVCLTEFKDNDHVRTLPLCSH 114
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH C+D WLR + CPLC+
Sbjct: 115 IFHHDCIDVWLRSNTNCPLCR 135
>gi|255581543|ref|XP_002531577.1| protein binding protein, putative [Ricinus communis]
gi|223528807|gb|EEF30813.1| protein binding protein, putative [Ricinus communis]
Length = 276
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
G+S Q S S K+ D+ G+ + ++ C +CL + E +R LPC H FH
Sbjct: 179 GSSMQQASSSVSAEPKKQDTANAVGSMKASEDELTCSVCLEQVNVGELIRTLPCLHQFHA 238
Query: 288 KCVDQWLRILSCCPLCK 304
C+D WLR CP+CK
Sbjct: 239 NCIDPWLRQQGTCPVCK 255
>gi|260782279|ref|XP_002586217.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
gi|229271313|gb|EEN42228.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
Length = 619
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 210 PLISSVLGYNMNMGAAD--KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 267
PL LG ++ D +G + +QI LP+ + A NS C +C+
Sbjct: 524 PLTLVFLGIVISADGEDTPRGLTKEQIDTLPTRTFSEPSREENATNS--------CNVCI 575
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
Y E +R LPC+H FH CVD+WL I + CP+C+ +
Sbjct: 576 TDYIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 615
>gi|109081305|ref|XP_001098434.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 7 [Macaca
mulatta]
Length = 984
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|14714485|gb|AAH10369.1| RNF111 protein [Homo sapiens]
gi|119597960|gb|EAW77554.1| ring finger protein 111, isoform CRA_a [Homo sapiens]
Length = 137
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 41 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 100
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 101 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 130
>gi|410949128|ref|XP_003981276.1| PREDICTED: RING finger protein 44 isoform 2 [Felis catus]
Length = 351
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 269 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 319
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|403349495|gb|EJY74187.1| hypothetical protein OXYTRI_04558 [Oxytricha trifallax]
Length = 347
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 154 FFAIWFVMGNVWVFD-SRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLI 212
F W + GN + + + G + + + ++ A++Y + L CC+
Sbjct: 192 FHVAWLIYGNTFHYSRNSMGCKDTFDDFKAMWVIMMI--AIAYGYLVFLIYGFACCIG-- 247
Query: 213 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANED----PECCICLA 268
S VL + + G A++ + R+P Y +NL +E +C ICL
Sbjct: 248 SCVLCFVIAAGRQQSRANNPMVDRIP---YLAAVNNLNRKKFENVDEQNRNMEQCAICLG 304
Query: 269 KYKEKEEVRKLPCS--HMFHLKCVDQWLRILSCCPLCKQELE 308
Y + +E+ +L C H FH +C+ +WL+ CPLCK+E++
Sbjct: 305 DYVDTDEIAELKCDQRHYFHSECLKEWLKRKLECPLCKKEIK 346
>gi|255571782|ref|XP_002526834.1| protein with unknown function [Ricinus communis]
gi|223533838|gb|EEF35569.1| protein with unknown function [Ricinus communis]
Length = 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
+ AA+KG + LP + Y + A S EC ICL +++E +EVR LP
Sbjct: 66 SQAAANKGLKKKILQSLPKFTYGSAAATAAAAGSCK-YASTECAICLGEFEEGDEVRVLP 124
Query: 281 -CSHMFHLKCVDQWLRILSCCPLCKQEL 307
C H FH+ C+D WL S CP C+Q L
Sbjct: 125 QCGHGFHVGCIDTWLGSHSSCPSCRQIL 152
>gi|47497730|dbj|BAD19795.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 195
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
A+ G + I LP+ Y+R DP C +CL + E VR LP C H
Sbjct: 92 AECGLTAAAIDALPASEYERPRGG---------GGDPACSVCLEDVRGGETVRWLPACGH 142
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
++H C+D WLR + CPLC+ +L
Sbjct: 143 LYHAACIDAWLRSRTTCPLCRSDL 166
>gi|348676453|gb|EGZ16271.1| hypothetical protein PHYSODRAFT_560772 [Phytophthora sojae]
Length = 354
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 233 QISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
QI LP+++Y+ R D + + N + C +C +++ +EEVR LPC H +H +C
Sbjct: 275 QIIALPTFKYQFRERHDDENQTEEDSEVN-NTVCAVCCDEFEAEEEVRALPCLHFYHREC 333
Query: 290 VDQWLRILSCCPLCKQ 305
+DQWL CP+CK
Sbjct: 334 IDQWLMYHRQCPICKH 349
>gi|119605476|gb|EAW85070.1| ring finger protein 44, isoform CRA_a [Homo sapiens]
Length = 408
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 326 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 376
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 377 EFHTKCVDKWLKANRTCPICRAD 399
>gi|47077085|dbj|BAD18471.1| unnamed protein product [Homo sapiens]
Length = 994
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLVTNKKCPICRVDIE 987
>gi|74205977|dbj|BAE23252.1| unnamed protein product [Mus musculus]
Length = 876
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 780 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 839
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 840 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 869
>gi|325186499|emb|CCA21039.1| RING Finger Ubiquitin ligase putative [Albugo laibachii Nc14]
Length = 281
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 200 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY--KRVDSNLEAGNSAPA 257
L FL + V +SS + ++G G S QI RLP++RY + D + A +
Sbjct: 173 LRFLSMLRRVNELSSQIEVPDDLG----GLSYPQILRLPTFRYSIREADHSDAAHTCKES 228
Query: 258 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ + C IC K++ EEVR L C H +H C+DQWL CP+CK
Sbjct: 229 DLNTLCAICCYKFEAGEEVRILSCFHYYHRGCIDQWLYQNRICPVCK 275
>gi|149726055|ref|XP_001502682.1| PREDICTED: RING finger protein 44 [Equus caballus]
Length = 432
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|449440682|ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
gi|449518937|ref|XP_004166492.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
Length = 377
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQREAVEALIEELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 250
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH+ C+D+WLR+ CP C+
Sbjct: 251 LPCAHNFHVGCIDEWLRLNVKCPRCR 276
>gi|449451185|ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
sativus]
Length = 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 220 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRK 278
M+ D G + I+ P Y ++ L+ +S + CC ICLA YK + +R
Sbjct: 70 MDSVVVDIGLDQETITSYPKLLYS--EAKLQKNDSTAS-----CCSICLADYKNSDVLRL 122
Query: 279 LP-CSHMFHLKCVDQWLRILSCCPLCK 304
LP C H+FHLKCVD WLR+ CP+C+
Sbjct: 123 LPDCGHLFHLKCVDPWLRLHPTCPVCR 149
>gi|356531427|ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 370
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A+ G + I + + +YK+ D +E +C +CL+++++ E VR LP CS
Sbjct: 115 ASTIGLDEALIKSITACKYKKGDGLVEV---------TDCSVCLSEFRDDESVRLLPKCS 165
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
H FHL C+D WL+ S CPLC+ +
Sbjct: 166 HAFHLPCIDTWLKSHSSCPLCRASI 190
>gi|148694251|gb|EDL26198.1| ring finger 111 [Mus musculus]
Length = 820
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 767 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 813
>gi|115384252|ref|XP_001208673.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196365|gb|EAU38065.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 469
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 211 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 270
+IS ++G N+N G A AS I LP K+VD + GN A EC IC+
Sbjct: 377 VISELVGQNVN-GTAPPPASRSAIQSLPK---KKVDQEM-LGNDGRA----ECSICMDPV 427
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+ EV LPC H FH +C++ WL + CP C++ ++
Sbjct: 428 ELGTEVTVLPCKHWFHFQCIEMWLNQHNTCPHCRRGID 465
>gi|410949126|ref|XP_003981275.1| PREDICTED: RING finger protein 44 isoform 1 [Felis catus]
Length = 431
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 349 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 399
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 400 EFHTKCVDKWLKANRTCPICRAD 422
>gi|74180382|dbj|BAE32356.1| unnamed protein product [Mus musculus]
Length = 347
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+ +Q+ ++P+ Y++ D E C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKEQLKQIPTHDYQKGD------------EYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 256
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
>gi|403222214|dbj|BAM40346.1| uncharacterized protein TOT_020000605 [Theileria orientalis strain
Shintoku]
Length = 462
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
C +CL +Y+E E+++LPC+H +H C+D WL + CP+CK
Sbjct: 412 CSVCLEEYQEGVEIKRLPCTHFYHKNCIDLWLNKSTICPICK 453
>gi|357517007|ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
gi|355522814|gb|AET03268.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
Length = 356
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G D QI + + YK+ G++ + +C +CL+++++ E VR LP C+H+FH
Sbjct: 114 GLDDAQIKSIAVFSYKK-------GDAFFSTTVTDCSVCLSEFQDDESVRLLPMCNHVFH 166
Query: 287 LKCVDQWLRILSCCPLCKQEL 307
L C+D WL+ S CPLC+ +
Sbjct: 167 LPCIDTWLKSNSSCPLCRSSV 187
>gi|414585842|tpg|DAA36413.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 140
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 60 IGTQSKGLPESVIALLPTSTYK-------TGIFSRKEKHDECVICCMAYKNRDRLTKLPC 112
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H CV +WL+I CP+C +E+
Sbjct: 113 GHHYHQACVAKWLQINKVCPVCNKEV 138
>gi|326668275|ref|XP_002662262.2| PREDICTED: e3 ubiquitin-protein ligase RNF167-like [Danio rerio]
Length = 401
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
S +Q+ ++P ++ + DS C ICL +Y+E +++R LPCSH +H +C
Sbjct: 216 SKEQLKKIPIHKFNKGDSY------------DVCAICLDEYEEGDKLRVLPCSHAYHSRC 263
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CKQ + R
Sbjct: 264 VDPWLTQTKKTCPVCKQRVTR 284
>gi|224130156|ref|XP_002320766.1| predicted protein [Populus trichocarpa]
gi|222861539|gb|EEE99081.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 263 CCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
C ICL +Y+EKE +R +P C H FHL C+D+WLR S CP+C+ +++
Sbjct: 115 CSICLGEYQEKEVLRIMPKCGHNFHLSCIDEWLRKHSTCPVCRFQIQ 161
>gi|226499042|ref|NP_001150572.1| RING-H2 finger protein ATL1R [Zea mays]
gi|195640284|gb|ACG39610.1| RING-H2 finger protein ATL1R [Zea mays]
Length = 177
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
++G + R+P+ Y + G A+E C ICLA+++E E R LP C H
Sbjct: 60 NRGVKKSVLRRIPTVPYAASAAACSQGEGDDADE---CAICLAEFEEGEPTRVLPQCGHA 116
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FH CVD+WLR S CP C++ L
Sbjct: 117 FHAACVDRWLRAHSSCPSCRRIL 139
>gi|242076978|ref|XP_002448425.1| hypothetical protein SORBIDRAFT_06g026980 [Sorghum bicolor]
gi|241939608|gb|EES12753.1| hypothetical protein SORBIDRAFT_06g026980 [Sorghum bicolor]
Length = 398
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Query: 234 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 292
IS++ +YKR D+++ +C +CL ++++ E +R LP CSH FH +C+D+
Sbjct: 145 ISKITLCKYKRGDASVHT---------TDCSVCLGEFRDGESLRLLPKCSHAFHQQCIDK 195
Query: 293 WLRILSCCPLCKQEL 307
WL+ S CPLC+ +
Sbjct: 196 WLKSHSNCPLCRSNI 210
>gi|242093184|ref|XP_002437082.1| hypothetical protein SORBIDRAFT_10g020970 [Sorghum bicolor]
gi|241915305|gb|EER88449.1| hypothetical protein SORBIDRAFT_10g020970 [Sorghum bicolor]
Length = 328
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 228 GASDDQISRLPSWRYKRVDSNLE-----------AGNSAP--ANEDPECCICLAKYKEKE 274
G S D I+ LP++ Y+ D++ G + P A EC +CL + ++ +
Sbjct: 75 GLSADDIAALPTFTYRARDASASPSHGGGRRSRSKGRTTPGRAGAAVECVVCLQEMEDGD 134
Query: 275 EVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
VR LP C H FH C+D WLR S CP+C+ E
Sbjct: 135 VVRVLPACRHFFHGGCIDAWLRAHSTCPVCRAHPE 169
>gi|297596317|ref|NP_001042380.2| Os01g0212700 [Oryza sativa Japonica Group]
gi|56201670|dbj|BAD73148.1| ring-H2 zinc finger protein-like [Oryza sativa Japonica Group]
gi|215766139|dbj|BAG98367.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672992|dbj|BAF04294.2| Os01g0212700 [Oryza sativa Japonica Group]
Length = 185
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A G S I+ LP++ Y+ + A +C +CL + E+VR+LP C
Sbjct: 69 ANSHGMSAAAIAALPTFGYEASAAAAAA---------LDCAVCLGQVDAGEKVRQLPKCG 119
Query: 283 HMFHLKCVDQWLRILSCCPLCKQELE 308
H+FH +CVD WLR S CP+C+ +E
Sbjct: 120 HLFHAECVDAWLRAHSTCPMCRAAVE 145
>gi|242041429|ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
gi|241921963|gb|EER95107.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
Length = 280
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
G S +S S K+ D G S ++ C +CL + + +R LPC H FH+
Sbjct: 183 GPSQLSVSSTGSGNEKKQDGLKSDGTSKTPEDELTCSVCLEQVAVGDLLRSLPCLHQFHV 242
Query: 288 KCVDQWLRILSCCPLCKQEL 307
C+D WLR CP+CK ++
Sbjct: 243 NCIDPWLRQQGTCPICKHQV 262
>gi|358414167|ref|XP_003582765.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 2 [Bos
taurus]
Length = 636
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 532 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 591
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 592 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 629
>gi|13752369|gb|AAK38636.1|AF329846_1 ring finger protein, partial [Gallus gallus]
Length = 879
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 826 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 872
>gi|259490266|ref|NP_001159177.1| uncharacterized LOC100304262 precursor [Zea mays]
gi|223942485|gb|ACN25326.1| unknown [Zea mays]
gi|413956777|gb|AFW89426.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 223 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 281
G A G + + P+ Y V + + A S + EC +CLA +++++E+R LP C
Sbjct: 112 GGARAGLDKEVVESFPTAVYGDVKARV-AARSGSGSGPLECAVCLAAFEDQDELRVLPAC 170
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H+FH C+D WL CPLC+ +L
Sbjct: 171 CHVFHPDCIDPWLAGAVTCPLCRADL 196
>gi|410961153|ref|XP_003987149.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Felis
catus]
Length = 925
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 872 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 918
>gi|449469531|ref|XP_004152473.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like isoform 2 [Cucumis
sativus]
Length = 281
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 217 GYN--MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKE 274
GY+ + + +A + A + I LP +R K V ++ EC ICL ++
Sbjct: 131 GYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGN 179
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
EVR +PC+H FH++C+D+WLR+ CP C+
Sbjct: 180 EVRGMPCAHNFHVECIDEWLRLNVKCPRCR 209
>gi|402874436|ref|XP_003901044.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Papio anubis]
Length = 601
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 497 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 556
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 557 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 594
>gi|301611422|ref|XP_002935238.1| PREDICTED: hypothetical protein LOC100491274 [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 234 ISRLPSWRYKR---VDSNLEAG---NSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 287
ISRL + RY++ D G ++ ++ P C ICL ++ + +E+R LPC H +HL
Sbjct: 233 ISRLGTRRYQQRMLKDQRASGGWVETASTSSSVPVCAICLEEFTDGQELRILPCCHEYHL 292
Query: 288 KCVDQWLRILSCCPLC 303
CVD WLR CPLC
Sbjct: 293 GCVDPWLRQNHTCPLC 308
>gi|222623015|gb|EEE57147.1| hypothetical protein OsJ_07055 [Oryza sativa Japonica Group]
Length = 213
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
SA P C ICLA + E VR LP C+H FH++CVD+WL S CP C+Q L
Sbjct: 135 SAAGGPSPACAICLADLEPGERVRVLPKCNHGFHVRCVDRWLLARSTCPTCRQPL 189
>gi|426233210|ref|XP_004010610.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Ovis
aries]
gi|426233212|ref|XP_004010611.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Ovis
aries]
Length = 994
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|426216417|ref|XP_004002459.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Ovis aries]
Length = 293
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YK 243
S +W+ + +S P +++ +LG N G A ++I+ LP+ +
Sbjct: 152 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQE 209
Query: 244 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
+VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C
Sbjct: 210 QVDKGLE------------CPVCKEDYTVEEEVRQLPCNHYFHSSCIVPWLELHDACPVC 257
Query: 304 KQEL 307
++ L
Sbjct: 258 RKSL 261
>gi|397515417|ref|XP_003827948.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Pan
paniscus]
Length = 992
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|109081307|ref|XP_001098125.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 4 [Macaca
mulatta]
Length = 992
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|403274539|ref|XP_003929032.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Saimiri boliviensis
boliviensis]
Length = 994
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|357137098|ref|XP_003570138.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like
[Brachypodium distachyon]
Length = 382
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 280
N+ +D G + I+++ +YKR D + G +C +CL ++++ E +R LP
Sbjct: 131 NLSPSD-GMDETLINKITVCKYKRGDGFVVDGT--------DCSVCLGEFRDGESLRLLP 181
Query: 281 -CSHMFHLKCVDQWLRILSCCPLCK 304
CSH FHL C+D WL+ S CPLC+
Sbjct: 182 KCSHAFHLPCIDPWLKSHSSCPLCR 206
>gi|355778079|gb|EHH63115.1| hypothetical protein EGM_16017 [Macaca fascicularis]
Length = 1002
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 995
>gi|326526351|dbj|BAJ97192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 258 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 307
+E +C ICL +Y+E + +R LPC+H FHL CVD+WL+ I CPLC+ ++
Sbjct: 501 DETAQCYICLVEYEEGDCIRILPCNHEFHLTCVDKWLKEIHRVCPLCRGDV 551
>gi|428173594|gb|EKX42495.1| hypothetical protein GUITHDRAFT_141168 [Guillardia theta CCMP2712]
Length = 1546
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 241 RYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 298
R + E ED P C ICL + E+ R LPC H+FH C+DQWL +
Sbjct: 1422 RSSEAEGQTEGQTDGQDEEDNRPTCSICLGNFFTGEDCRMLPCLHVFHKNCIDQWLSMSQ 1481
Query: 299 CCPLCKQEL 307
CPLCK+ +
Sbjct: 1482 ECPLCKRSV 1490
>gi|426379249|ref|XP_004056314.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Gorilla
gorilla gorilla]
Length = 994
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|355692754|gb|EHH27357.1| hypothetical protein EGK_17534 [Macaca mulatta]
Length = 1001
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 994
>gi|168053219|ref|XP_001779035.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669597|gb|EDQ56181.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 259 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 308
ED EC +CL K++E E +R LP CSH+FH +C+D W S CPLC+ L+
Sbjct: 30 EDFECAVCLEKFQEDESLRLLPKCSHVFHTECIDVWFLSHSTCPLCRMSLK 80
>gi|156121123|ref|NP_001095709.1| E3 ubiquitin-protein ligase Arkadia [Bos taurus]
gi|151554408|gb|AAI47932.1| RNF111 protein [Bos taurus]
gi|296483228|tpg|DAA25343.1| TPA: ring finger protein 111 [Bos taurus]
Length = 994
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|115495109|ref|NP_001069776.1| E3 ubiquitin-protein ligase RNF115 [Bos taurus]
gi|92096918|gb|AAI14854.1| Ring finger protein 115 [Bos taurus]
gi|296489499|tpg|DAA31612.1| TPA: Rabring 7 [Bos taurus]
gi|440903798|gb|ELR54405.1| E3 ubiquitin-protein ligase RNF115 [Bos grunniens mutus]
Length = 293
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 186 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YK 243
S +W+ + +S P +++ +LG N G A ++I+ LP+ +
Sbjct: 152 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQE 209
Query: 244 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 303
+VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C
Sbjct: 210 QVDKGLE------------CPVCKEDYTVEEEVRQLPCNHYFHSSCIVPWLELHDACPVC 257
Query: 304 KQEL 307
++ L
Sbjct: 258 RKSL 261
>gi|2894379|emb|CAA74911.1| ring finger protein [Hordeum vulgare subsp. vulgare]
Length = 295
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 262 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQ 305
EC ICL+++ +KEE+R LP C H FH+ CVD WLR S CP C++
Sbjct: 208 ECAICLSEFADKEEIRVLPQCGHGFHVACVDAWLRAHSSCPSCRR 252
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.136 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,803,452,217
Number of Sequences: 23463169
Number of extensions: 186741230
Number of successful extensions: 631756
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8706
Number of HSP's successfully gapped in prelim test: 3314
Number of HSP's that attempted gapping in prelim test: 618111
Number of HSP's gapped (non-prelim): 13112
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)