BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021673
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 158/338 (46%), Gaps = 53/338 (15%)
Query: 16 STTVPYSSSPPATEDRMARNRPAAR----AGA------PSFLIR-TAMRI--SRASTW-- 60
+ +V S+P R R AAR AG+ PS L+R TA R S W
Sbjct: 46 TISVDEESNPIHRSARRQGLREAARFLRHAGSRRMMREPSMLVRETAAEQLEERQSDWAY 105
Query: 61 ----MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 116
+ L++L L ++I L +S+ E P P+R+W+VGY I C L + + YR+
Sbjct: 106 SKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRR 165
Query: 117 ----YASQVDGFSLPDVEQQRS------SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWV 166
+ G L + Q+ + S+ ++ +F IW+++G WV
Sbjct: 166 RRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWV 225
Query: 167 FDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNM 222
+P L+ LCI L ++ + ++ L +CCC+P I ++L Y +
Sbjct: 226 SAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV-- 282
Query: 223 GAADKGASDDQISRLPSWRYKRVDS-----------NLEAGNSAPAN-----EDPECCIC 266
A +GAS + I ++P +R+ + + E G +P ED ECCIC
Sbjct: 283 -ADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCIC 341
Query: 267 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
L +Y++ E+R+LPC+H FH C+D+WL I S CPLCK
Sbjct: 342 LCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 50/308 (16%)
Query: 43 APSFLIR-TAMRI--SRASTW------MTLELL--ALLVQISIITFTLSISKKESPIWPM 91
APS L+R TA R R W + ++L A LV S + ++ +E P P+
Sbjct: 51 APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTV--EERPNEPI 108
Query: 92 RIWIVGYDIGCLLSLLLLYGRY---------RQLYASQVDGFSLPDVEQQRSSEDSRFSH 142
R+WI Y + CL ++L++ Y R L + + +++ +Q S ++S
Sbjct: 109 RVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYS 168
Query: 143 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 202
+ +C + + IW+++G WV + APNL+ L + LA + F +L
Sbjct: 169 FVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLA 228
Query: 203 LL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 258
L LCCC+P I ++L Y + A +G S+ ++ LP +++K SN E + P
Sbjct: 229 CLVGIALCCCLPCIIALL-YAV---AGTEGVSEAELGVLPLYKFKAFHSN-EKNITGPGK 283
Query: 259 -------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 299
ED +CCICL+ Y++ E+ LPC+H FH C+ +WL++ +
Sbjct: 284 MVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRAT 343
Query: 300 CPLCKQEL 307
CPLCK +
Sbjct: 344 CPLCKYNI 351
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 151/331 (45%), Gaps = 81/331 (24%)
Query: 44 PSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTLSISKKESPIWPMRIW 94
PS L+R A R S W + L+++ L +S+ T L +S+KE PI P+R+W
Sbjct: 75 PSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVW 134
Query: 95 IVGYDIGCLLSLLLLYGRYRQLYA------------------------------------ 118
++GY + C+L ++ + YR+
Sbjct: 135 LLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRN 194
Query: 119 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 178
S V SL ++ + SS + ++ +F IW+++G WV Q +P
Sbjct: 195 SGVQDLSLGHLDTESSS-------VAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 247
Query: 179 NLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 234
++ L I L ++ + ++ + +CCC+P I +VL Y + A +GAS + I
Sbjct: 248 RIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---ADQEGASKEDI 303
Query: 235 SRLPSWRYKRV-DSN---------------LEAGNSAPA-----NEDPECCICLAKYKEK 273
+L ++++++ D+N E G +P ED ECCICL+ Y++
Sbjct: 304 EQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDG 363
Query: 274 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 364 TELRELPCGHHFHCSCVDKWLYINATCPLCK 394
>sp|Q8LDB8|RING2_ARATH E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana
GN=At1g63170 PE=2 SV=2
Length = 381
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 67/337 (19%)
Query: 31 RMARNRPAARA--GAPSFLIRTAMRI---SRASTW------MTLELLALLVQISIITFTL 79
R+ R+ + R PS L+R A R S W + L+ + L + + T L
Sbjct: 34 RLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVL 93
Query: 80 SISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA--------------------- 118
+S E+P P+R+WI+GY + C++ ++ + YR+ +
Sbjct: 94 VLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSM 153
Query: 119 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSF 174
+ +G L +R E + + N LE + IW+V+G WV
Sbjct: 154 DEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELA 213
Query: 175 QRAPNLHVLCI----SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 230
Q +P L+ LCI + + + ++ + +CCC+P I +VL Y + A +GAS
Sbjct: 214 QGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGAS 269
Query: 231 DDQISRLPSWRYKRVDSNL------------------EAGNSAPA-----NEDPECCICL 267
+ I +L +++++V + E G +P +ED ECCICL
Sbjct: 270 KEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICL 329
Query: 268 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 304
+ Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 330 SAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 185 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 235
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 203 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 262
Query: 236 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 291
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 263 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 322
Query: 292 QWLRILSCCPLCKQELE 308
QWL + CP+C+ ++E
Sbjct: 323 QWLAMSKKCPICRVDIE 339
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
HV+ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 222 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 281
+G +G S D I+ LPS RYK E N NE C IC Y++ E++ LPC
Sbjct: 255 VGTESRGLSADTIASLPSKRYK------EGDNQNGTNE--SCVICRLDYEDDEDLILLPC 306
Query: 282 SHMFHLKCVDQWLRILSCCPLCKQEL 307
H +H +C++ WL+I CP+C E+
Sbjct: 307 KHSYHSECINNWLKINKVCPVCSAEV 332
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 181 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 239
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 240 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 298
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 299 CCPLCKQEL 307
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
A KG + D ++R+P R +++P E C +CL ++ E VR LP C
Sbjct: 148 AISKGLTGDSLNRIPKVRIT---------DTSP--EIVSCSVCLQDFQVGETVRSLPHCH 196
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D+WLR + CPLC++ L
Sbjct: 197 HMFHLPCIDKWLRRHASCPLCRRHL 221
>sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c
PE=2 SV=1
Length = 967
Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 863 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 922
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 923 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 960
>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis GN=rnf111-b
PE=2 SV=1
Length = 959
Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 855 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEATEEDTEEKCTICLSIL 914
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 915 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 952
>sp|Q5R476|RN111_PONAB E3 ubiquitin-protein ligase Arkadia OS=Pongo abelii GN=RNF111 PE=2
SV=1
Length = 986
Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 222 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis GN=rnf111
PE=2 SV=1
Length = 954
Score = 65.1 bits (157), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +Y++V ++ + + +D +C ICL+
Sbjct: 850 LGNVNRGASQGTIERCTYPHKYEKVSTDWFSQRKLHSKQDGEEATEEDTEEKCTICLSIL 909
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 910 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 947
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLP-CSH 283
D G I LP + YK + + G A ++P +C +CL ++ EK+++R LP CSH
Sbjct: 105 DSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSH 164
Query: 284 MFHLKCVDQWLRILSCCPLCKQEL 307
FHL C+D WL+ S CPLC+ L
Sbjct: 165 AFHLNCIDTWLQSNSTCPLCRGTL 188
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKE 274
G ++++GA D D RLP K+V +L P D +C +CL +++E E
Sbjct: 34 GMDIDLGAVDFTEWD---QRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGE 90
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
VR+LPC H+FH C+ WL + CPLC+ EL
Sbjct: 91 TVRQLPCEHLFHSACILPWLGKTNSCPLCRHEL 123
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ NLE S E C +C + ++ ++ +R LPC+H
Sbjct: 366 AKPRGLTKADIEQLPSYRF-----NLENHQS----EQTLCVVCFSDFESRQLLRVLPCNH 416
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
FH KCVD+WL+ CP+C+
Sbjct: 417 EFHAKCVDKWLKTNRTCPICR 437
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 217 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKE 274
G ++++GA D D RLP K+V +L P D +C +CL +++E E
Sbjct: 34 GMDIDLGALDFTEWD---QRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGE 90
Query: 275 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 307
VR+LPC H+FH C+ WL + CPLC+ EL
Sbjct: 91 TVRQLPCEHLFHSSCILPWLGKTNSCPLCRHEL 123
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 610
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 745
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 225 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 283
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 98 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 284 MFHLKCVDQWLRILSCCPLCK 304
+FH+ C+D WL+ + CPLC+
Sbjct: 156 VFHIDCIDIWLQGNANCPLCR 176
>sp|Q99ML9|RN111_MOUSE E3 ubiquitin-protein ligase Arkadia OS=Mus musculus GN=Rnf111 PE=1
SV=1
Length = 989
Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNL----------EAGNSAPANEDPECCICLAKY 270
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 944
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 982
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 627
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 221 NMGAADKGASDDQISRLPSWRYKRVDSNL---------EAGNSAPANEDPECC-ICLAKY 270
MGA D A DD S + K + +L N+ A+E+ + C +CL +
Sbjct: 145 QMGAVDT-AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDF 203
Query: 271 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+ E VR LP C HMFHL C+D WL CP+C++++
Sbjct: 204 QLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 263 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 305
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 588
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 282
KG + D + ++P + +NL+A N+D C +CL ++ E VR LP C
Sbjct: 158 GGSKGLTGDLVDKIPKIKITG-KNNLDA----SGNKD-SCSVCLQDFQLGETVRSLPHCH 211
Query: 283 HMFHLKCVDQWLRILSCCPLCKQEL 307
HMFHL C+D WL CP+C+++L
Sbjct: 212 HMFHLPCIDNWLFRHGSCPMCRRDL 236
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 227 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 285
+G + I+ LP++ D G +A A E C +CL+ KE+++ R+LP C H+F
Sbjct: 80 RGLNPTVIASLPTFTVGATD-----GVAASATE---CAVCLSVLKEQDKARELPNCKHIF 131
Query: 286 HLKCVDQWLRILSCCPLCKQELE 308
H+ CVD WL S CP+C+ E+E
Sbjct: 132 HVDCVDTWLTTCSTCPVCRTEVE 154
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 21/123 (17%)
Query: 200 LLFLLLCCCV--------PLISSVLGYNMNMGA------ADKGASDDQISRLPSWRYKRV 245
LLF +L CCV P +S G +G D I+ PS+ Y +V
Sbjct: 57 LLFSMLACCVCYKYTNTSPHGTSSDTEEGGHGEVAFTRRTSRGLGKDVINSFPSFLYSQV 116
Query: 246 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
L+ G EC ICL +++++E +R +P CSH FH C+D WL S CP+C+
Sbjct: 117 -KGLKIGKGGV-----ECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170
Query: 305 QEL 307
L
Sbjct: 171 ASL 173
>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis
GN=rnf111-a PE=2 SV=1
Length = 923
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 222 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 270
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 819 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 878
Query: 271 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 879 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 916
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 207 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCIC 266
CC+ + G+ + +G D I P++ Y V + + GN EC IC
Sbjct: 71 CCIEE-NETGGHEVLHSRVRRGIDKDVIESFPAFLYSEVKA-FKIGNGGV-----ECAIC 123
Query: 267 LAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
L +++++E +R +P CSH FH C+D+WL S CP+C+ L
Sbjct: 124 LCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANL 165
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 219 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 278
+ + A A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQTEAVEALIQELPKFRLKAV-----------PDDCGECLICLEEFHIGHEVRG 250
Query: 279 LPCSHMFHLKCVDQWLRILSCCPLCK 304
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 219 NMNMGAADKGASDDQ--ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 276
N ++ A D DQ I+ P + + + D++ + + D C ICL +YKE E +
Sbjct: 93 NEDLEAGDVVVGLDQAVINSYPKFHFSK-DTSAASSDGFGGGGDTTCSICLCEYKEAEML 151
Query: 277 RKLP-CSHMFHLKCVDQWLRILSCCPLCKQ 305
R +P C H FHL C+D WL++ CP+C+
Sbjct: 152 RMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 212 ISSVLGYNMNMG--AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAK 269
+S+ N N+G AA G + ++P Y +++A EC ICL
Sbjct: 70 VSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKA---------TECLICLGD 120
Query: 270 YKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
+++ E+VR LP C+H FH++C+D WL S CP C+Q L
Sbjct: 121 FEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 199 FLLFLLLCCCVPLI-----SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGN 253
F+ ++ CC+ I G ++ A +G + I P++ Y V L+ G
Sbjct: 60 FISLGMVSCCLHCIFYREEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVK-GLKIGK 118
Query: 254 SAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
EC ICL++++++E +R +P CSH FH C+D WL S CP+C+ L
Sbjct: 119 GGV-----ECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANL 168
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
+KG + LP + +S +G +A + EC ICL + + EE+R LP C H
Sbjct: 67 NKGLKKKALQSLPRSTFTAAEST--SGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHS 124
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FH++C+D+WL S CP C++ L
Sbjct: 125 FHVECIDKWLVSRSSCPSCRRIL 147
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 226 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 284
D G I LP + Y V +LE + +C +CL ++ + +++R LP CSH
Sbjct: 178 DSGLDQTAIDALPVFLYGNVTISLE--------QPFDCAVCLNEFSDTDKLRLLPVCSHA 229
Query: 285 FHLKCVDQWLRILSCCPLCKQEL 307
FHL C+D WL S CPLC++ L
Sbjct: 230 FHLHCIDTWLLSNSTCPLCRRSL 252
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+ +Q+ ++P+ Y++ D E C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKEQLKQIPTHDYQKGD------------EYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 256
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
>sp|Q6ZNA4|RN111_HUMAN E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens GN=RNF111 PE=1
SV=3
Length = 994
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 262 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 308
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 263 CCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 304
C ICL YK K +R+LP C+H+FHLKC+D WLR+ CP+C+
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCR 189
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 221 NMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 279
N G++ +G D+ + P + Y V S ++D EC ICL + ++ E VR L
Sbjct: 87 NDGSSRRGGLDNAVVESFPVFAYSSVKE------SKIGSKDLECAICLNELEDHETVRLL 140
Query: 280 P-CSHMFHLKCVDQWLRILSCCPLCKQEL 307
P C+H+FH+ C+D WL + CP+C+ L
Sbjct: 141 PICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 325 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEVRQLLRVLPCNH 375
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 376 EFHAKCVDKWLKANRTCPICRAD 398
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 224 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 283
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 268 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFEVRQLLRVLPCNH 318
Query: 284 MFHLKCVDQWLRILSCCPLCKQE 306
FH KCVD+WL+ CP+C+ +
Sbjct: 319 EFHAKCVDKWLKANRTCPICRAD 341
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 228 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 286
G ++ I + ++YK D ++ +C +CL++++E E +R LP C+H FH
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDG---------SDCSVCLSEFEENESLRLLPKCNHAFH 166
Query: 287 LKCVDQWLRILSCCPLCK 304
L C+D WL+ S CPLC+
Sbjct: 167 LPCIDTWLKSHSNCPLCR 184
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 230 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 289
+ +Q+ ++P+ Y++ D E C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKEQLKQIPTHDYQKGD------------EYDVCAICLDEYEDGDKLRILPCAHAYHSRC 256
Query: 290 VDQWL-RILSCCPLCKQELER 309
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,865,442
Number of Sequences: 539616
Number of extensions: 4260657
Number of successful extensions: 12700
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 12202
Number of HSP's gapped (non-prelim): 510
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)