Query 021674
Match_columns 309
No_of_seqs 115 out of 1575
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:48:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021674.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021674hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532 Permease of the major 100.0 1.4E-39 3.1E-44 301.3 25.7 307 1-307 138-452 (466)
2 COG2271 UhpC Sugar phosphate p 100.0 1.2E-33 2.7E-38 250.0 18.6 292 1-301 127-433 (448)
3 TIGR00894 2A0114euk Na(+)-depe 100.0 1.1E-31 2.3E-36 251.9 29.7 305 1-305 141-453 (465)
4 COG2814 AraJ Arabinose efflux 100.0 1.8E-29 3.9E-34 225.8 24.4 274 2-303 112-387 (394)
5 PRK09556 uhpT sugar phosphate 100.0 2.1E-29 4.7E-34 236.5 21.6 292 1-301 132-448 (467)
6 TIGR00903 2A0129 major facilit 100.0 8.5E-29 1.8E-33 225.2 23.9 273 1-299 89-362 (368)
7 PRK11663 regulatory protein Uh 100.0 1.5E-28 3.3E-33 228.6 23.8 293 2-301 122-423 (434)
8 TIGR00893 2A0114 d-galactonate 100.0 2.4E-27 5.1E-32 215.8 27.4 296 1-298 92-395 (399)
9 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5.9E-28 1.3E-32 223.3 22.8 280 1-291 106-410 (412)
10 PRK03545 putative arabinose tr 100.0 8.3E-27 1.8E-31 214.0 25.2 273 1-302 107-380 (390)
11 PRK10406 alpha-ketoglutarate t 100.0 1.8E-26 3.8E-31 214.7 25.8 283 1-307 134-429 (432)
12 PRK11273 glpT sn-glycerol-3-ph 100.0 4.2E-26 9E-31 213.4 26.4 290 1-296 130-429 (452)
13 TIGR00712 glpT glycerol-3-phos 99.9 2.2E-26 4.8E-31 214.4 22.5 299 2-306 129-437 (438)
14 PRK10642 proline/glycine betai 99.9 8.3E-25 1.8E-29 206.6 26.7 284 1-297 128-425 (490)
15 PLN00028 nitrate transmembrane 99.9 4.4E-25 9.5E-30 207.7 24.0 290 1-302 134-433 (476)
16 PRK09952 shikimate transporter 99.9 1E-24 2.2E-29 203.2 26.2 285 1-305 135-436 (438)
17 PRK09705 cynX putative cyanate 99.9 1.7E-24 3.6E-29 199.0 24.4 271 1-301 107-380 (393)
18 TIGR00897 2A0118 polyol permea 99.9 3.2E-24 6.9E-29 197.7 25.9 282 1-301 115-400 (402)
19 COG2223 NarK Nitrate/nitrite t 99.9 3.2E-25 6.8E-30 196.9 17.1 272 6-301 119-400 (417)
20 PRK14995 methyl viologen resis 99.9 2.7E-24 5.8E-29 203.4 21.9 264 1-276 104-412 (495)
21 PRK03699 putative transporter; 99.9 5.3E-24 1.1E-28 195.7 22.7 269 1-297 105-375 (394)
22 TIGR00899 2A0120 sugar efflux 99.9 1.3E-23 2.8E-28 191.1 24.3 271 2-299 98-371 (375)
23 PRK10213 nepI ribonucleoside t 99.9 2.9E-23 6.2E-28 190.9 26.1 265 1-294 118-383 (394)
24 PRK11551 putative 3-hydroxyphe 99.9 1.8E-23 3.9E-28 192.6 24.7 273 1-297 113-391 (406)
25 PRK10091 MFS transport protein 99.9 1.5E-23 3.3E-28 191.9 23.7 267 1-297 101-371 (382)
26 TIGR00890 2A0111 Oxalate/Forma 99.9 8.9E-24 1.9E-28 191.5 22.0 273 1-295 101-375 (377)
27 TIGR00881 2A0104 phosphoglycer 99.9 1.8E-24 3.8E-29 196.3 16.5 278 1-283 93-378 (379)
28 PRK11010 ampG muropeptide tran 99.9 4.8E-23 1E-27 194.4 25.0 280 2-301 118-402 (491)
29 PRK15402 multidrug efflux syst 99.9 1.4E-22 3E-27 186.9 27.3 288 1-308 111-401 (406)
30 PRK15075 citrate-proton sympor 99.9 6.3E-23 1.4E-27 191.0 25.0 259 1-280 127-397 (434)
31 PRK15011 sugar efflux transpor 99.9 7.5E-23 1.6E-27 188.0 24.5 267 6-301 120-390 (393)
32 TIGR00710 efflux_Bcr_CflA drug 99.9 1.9E-22 4.2E-27 183.9 26.6 261 1-282 103-366 (385)
33 KOG2533 Permease of the major 99.9 1.2E-23 2.7E-28 195.7 18.4 182 1-182 144-337 (495)
34 PRK15034 nitrate/nitrite trans 99.9 5.7E-23 1.2E-27 189.8 21.7 274 2-305 139-457 (462)
35 TIGR00711 efflux_EmrB drug res 99.9 5.3E-23 1.1E-27 193.7 21.8 265 1-277 100-410 (485)
36 TIGR00892 2A0113 monocarboxyla 99.9 4.5E-23 9.8E-28 193.0 18.9 286 1-295 118-414 (455)
37 PRK10504 putative transporter; 99.9 3.6E-22 7.9E-27 187.6 25.0 269 1-280 108-418 (471)
38 TIGR00900 2A0121 H+ Antiporter 99.9 1.4E-22 2.9E-27 183.1 21.3 257 1-277 102-363 (365)
39 PRK11102 bicyclomycin/multidru 99.9 5E-22 1.1E-26 181.1 24.7 173 1-185 89-261 (377)
40 TIGR00883 2A0106 metabolite-pr 99.9 2E-22 4.3E-27 183.7 20.4 270 1-291 106-390 (394)
41 PRK10489 enterobactin exporter 99.9 3.9E-22 8.4E-27 184.6 22.3 274 2-299 121-397 (417)
42 PRK12307 putative sialic acid 99.9 3.7E-22 7.9E-27 185.1 21.2 266 1-283 116-389 (426)
43 PRK05122 major facilitator sup 99.9 1.4E-21 2.9E-26 179.8 24.6 270 1-306 122-393 (399)
44 PF07690 MFS_1: Major Facilita 99.9 1.8E-23 3.9E-28 188.0 11.2 254 1-268 95-352 (352)
45 PRK11195 lysophospholipid tran 99.9 8.4E-22 1.8E-26 181.1 22.3 287 1-309 98-390 (393)
46 TIGR00879 SP MFS transporter, 99.9 7.6E-22 1.6E-26 184.3 21.6 292 1-301 137-469 (481)
47 TIGR00891 2A0112 putative sial 99.9 6.9E-22 1.5E-26 181.2 20.8 275 1-286 110-400 (405)
48 TIGR00887 2A0109 phosphate:H+ 99.9 2.6E-21 5.7E-26 183.3 23.9 296 1-306 125-494 (502)
49 PRK12382 putative transporter; 99.9 3.3E-21 7.1E-26 176.9 23.3 266 1-302 122-389 (392)
50 TIGR01299 synapt_SV2 synaptic 99.9 2.2E-21 4.8E-26 188.9 22.3 295 1-307 265-740 (742)
51 PRK15403 multidrug efflux syst 99.9 5E-21 1.1E-25 177.1 23.5 268 1-287 114-382 (413)
52 PRK09874 drug efflux system pr 99.9 5.6E-21 1.2E-25 175.9 22.9 279 2-306 118-402 (408)
53 PRK11043 putative transporter; 99.9 1.3E-20 2.8E-25 173.5 24.2 258 1-282 104-362 (401)
54 PRK10077 xylE D-xylose transpo 99.9 6.2E-21 1.3E-25 179.5 22.3 291 1-299 130-454 (479)
55 COG2807 CynX Cyanate permease 99.9 9.9E-21 2.2E-25 165.1 21.6 273 2-302 110-385 (395)
56 PRK11902 ampG muropeptide tran 99.9 2.1E-20 4.6E-25 172.3 25.0 272 5-298 108-386 (402)
57 TIGR00902 2A0127 phenyl propri 99.9 1.3E-20 2.8E-25 172.6 23.3 267 2-296 105-373 (382)
58 TIGR00886 2A0108 nitrite extru 99.9 2.6E-21 5.7E-26 175.5 17.9 252 1-264 101-366 (366)
59 TIGR00895 2A0115 benzoate tran 99.9 1.3E-20 2.7E-25 172.3 22.5 264 1-275 115-398 (398)
60 TIGR01272 gluP glucose/galacto 99.9 2.3E-20 5E-25 166.0 23.3 266 2-292 21-305 (310)
61 PRK10473 multidrug efflux syst 99.9 4.3E-20 9.2E-25 169.5 25.6 170 1-185 101-270 (392)
62 TIGR00896 CynX cyanate transpo 99.9 9.3E-21 2E-25 171.6 20.9 252 1-281 97-353 (355)
63 PRK11652 emrD multidrug resist 99.9 1.1E-19 2.3E-24 167.0 27.4 257 1-282 106-365 (394)
64 PRK11128 putative 3-phenylprop 99.9 2.1E-20 4.5E-25 171.2 22.2 267 2-296 105-373 (382)
65 PRK11646 multidrug resistance 99.9 2.7E-20 5.8E-25 171.6 23.0 270 1-299 109-385 (400)
66 PRK03893 putative sialic acid 99.9 6.2E-21 1.3E-25 180.3 18.8 283 1-292 118-443 (496)
67 PRK10133 L-fucose transporter; 99.9 2.6E-20 5.6E-25 173.5 22.3 281 1-306 127-436 (438)
68 PRK03633 putative MFS family t 99.9 6.6E-20 1.4E-24 167.8 23.5 270 1-305 104-374 (381)
69 PRK06814 acylglycerophosphoeth 99.9 1.1E-20 2.3E-25 195.4 20.2 275 1-290 118-410 (1140)
70 cd06174 MFS The Major Facilita 99.9 2.8E-19 6E-24 160.3 25.0 250 1-298 97-348 (352)
71 TIGR02718 sider_RhtX_FptX side 99.9 5.7E-19 1.2E-23 162.1 27.0 261 10-295 116-384 (390)
72 PRK09528 lacY galactoside perm 99.9 1.9E-20 4.2E-25 173.5 17.2 274 14-306 126-407 (420)
73 TIGR00898 2A0119 cation transp 99.8 4.9E-19 1.1E-23 167.8 24.4 287 1-307 190-501 (505)
74 TIGR00901 2A0125 AmpG-related 99.8 3.3E-19 7.2E-24 161.5 20.5 168 5-185 97-276 (356)
75 TIGR00882 2A0105 oligosacchari 99.8 1.4E-18 3E-23 159.8 20.3 275 4-299 112-392 (396)
76 PRK10054 putative transporter; 99.8 1.2E-18 2.5E-23 160.4 19.7 264 4-295 109-377 (395)
77 TIGR00885 fucP L-fucose:H+ sym 99.8 3E-18 6.5E-23 158.3 22.5 268 1-294 104-404 (410)
78 PRK08633 2-acyl-glycerophospho 99.8 1.5E-18 3.3E-23 179.4 20.8 273 1-290 113-398 (1146)
79 TIGR00792 gph sugar (Glycoside 99.8 1.9E-18 4.2E-23 160.6 17.7 250 9-280 117-383 (437)
80 TIGR00805 oat sodium-independe 99.8 1.1E-18 2.4E-23 169.0 13.6 184 1-184 182-397 (633)
81 KOG1330 Sugar transporter/spin 99.8 1.8E-18 3.8E-23 155.4 10.0 271 1-277 131-412 (493)
82 KOG2504 Monocarboxylate transp 99.8 2.7E-17 5.8E-22 154.7 17.5 290 2-302 146-476 (509)
83 PF05977 MFS_3: Transmembrane 99.7 2.5E-16 5.5E-21 148.7 21.8 282 2-305 114-397 (524)
84 TIGR00924 yjdL_sub1_fam amino 99.7 2.3E-15 5E-20 141.7 25.0 297 1-302 112-468 (475)
85 PRK10207 dipeptide/tripeptide 99.7 2.4E-15 5.2E-20 141.8 24.8 297 1-299 115-473 (489)
86 TIGR00889 2A0110 nucleoside tr 99.7 1.3E-14 2.7E-19 134.6 22.2 249 23-301 132-401 (418)
87 KOG3764 Vesicular amine transp 99.7 1.6E-15 3.5E-20 133.9 13.3 275 1-301 169-453 (464)
88 PF11700 ATG22: Vacuole efflux 99.6 2.3E-13 5.1E-18 127.4 26.2 288 10-309 145-475 (477)
89 COG0738 FucP Fucose permease [ 99.6 1.7E-13 3.7E-18 121.8 21.9 274 2-302 115-409 (422)
90 KOG0569 Permease of the major 99.6 1.3E-13 2.7E-18 127.7 21.2 186 2-189 127-340 (485)
91 PF13347 MFS_2: MFS/sugar tran 99.5 7.1E-13 1.5E-17 123.3 20.6 248 10-278 122-385 (428)
92 PRK09669 putative symporter Ya 99.5 7.8E-13 1.7E-17 123.6 20.9 247 11-280 129-391 (444)
93 KOG0253 Synaptic vesicle trans 99.5 2.7E-12 5.9E-17 112.6 20.6 289 2-307 177-526 (528)
94 PRK09848 glucuronide transport 99.5 9.5E-13 2.1E-17 123.1 19.0 162 111-280 221-391 (448)
95 PRK10054 putative transporter; 99.5 7.4E-13 1.6E-17 121.9 17.7 171 119-300 8-180 (395)
96 PRK09584 tppB putative tripept 99.5 6.8E-12 1.5E-16 118.9 22.7 65 1-65 122-188 (500)
97 KOG4686 Predicted sugar transp 99.5 5.3E-12 1.1E-16 107.2 18.3 272 2-297 147-438 (459)
98 TIGR00924 yjdL_sub1_fam amino 99.5 2.2E-12 4.8E-17 121.5 17.5 176 115-300 6-190 (475)
99 PF06609 TRI12: Fungal trichot 99.5 1.3E-11 2.8E-16 117.2 22.3 265 2-277 142-467 (599)
100 PF03209 PUCC: PUCC protein; 99.5 1.1E-11 2.5E-16 111.1 20.5 283 2-301 100-397 (403)
101 PRK15462 dipeptide/tripeptide 99.5 4.3E-12 9.4E-17 118.9 17.8 172 118-299 9-186 (493)
102 PF00083 Sugar_tr: Sugar (and 99.4 5.8E-17 1.3E-21 151.4 -15.2 298 1-308 112-444 (451)
103 PRK09584 tppB putative tripept 99.4 1.1E-11 2.4E-16 117.5 19.4 177 108-295 11-194 (500)
104 PRK11462 putative transporter; 99.4 2.1E-10 4.5E-15 107.8 25.9 241 13-280 131-390 (460)
105 KOG2563 Permease of the major 99.4 4.6E-12 1E-16 114.1 13.9 251 13-279 162-423 (480)
106 PRK10429 melibiose:sodium symp 99.4 3E-11 6.6E-16 113.8 19.3 253 11-280 126-396 (473)
107 PRK09528 lacY galactoside perm 99.4 1.2E-11 2.7E-16 114.6 15.7 181 113-301 5-190 (420)
108 PRK11646 multidrug resistance 99.4 3.7E-11 8E-16 110.8 18.0 170 121-301 13-184 (400)
109 PRK10504 putative transporter; 99.4 4.4E-11 9.6E-16 112.5 18.7 173 118-301 10-184 (471)
110 PRK11663 regulatory protein Uh 99.4 4.8E-11 1E-15 111.2 17.9 163 122-295 27-191 (434)
111 KOG0254 Predicted transporter 99.3 4.8E-11 1E-15 113.6 16.9 184 1-187 152-362 (513)
112 TIGR00882 2A0105 oligosacchari 99.3 6.4E-11 1.4E-15 108.9 16.6 175 117-300 1-181 (396)
113 PF07690 MFS_1: Major Facilita 99.3 1E-10 2.2E-15 105.0 17.2 163 125-297 3-167 (352)
114 PRK10207 dipeptide/tripeptide 99.3 1.2E-10 2.6E-15 110.0 18.2 171 118-297 14-189 (489)
115 KOG0255 Synaptic vesicle trans 99.3 7.9E-10 1.7E-14 105.5 23.7 260 1-276 181-467 (521)
116 PRK09874 drug efflux system pr 99.3 2.5E-10 5.4E-15 105.1 19.5 171 119-301 15-192 (408)
117 TIGR00806 rfc RFC reduced fola 99.3 1.9E-10 4.1E-15 105.8 17.9 60 2-63 126-185 (511)
118 PRK05122 major facilitator sup 99.3 1.1E-10 2.4E-15 107.4 15.9 171 117-294 14-191 (399)
119 KOG2615 Permease of the major 99.3 7.2E-11 1.6E-15 104.2 13.6 260 8-277 137-414 (451)
120 PRK10489 enterobactin exporter 99.3 8.8E-11 1.9E-15 108.7 15.1 185 109-299 8-194 (417)
121 TIGR00899 2A0120 sugar efflux 99.3 1.9E-10 4E-15 104.6 16.7 167 125-300 4-174 (375)
122 TIGR01301 GPH_sucrose GPH fami 99.3 9.8E-10 2.1E-14 102.7 21.5 291 7-304 130-473 (477)
123 COG2211 MelB Na+/melibiose sym 99.3 8.1E-10 1.8E-14 101.7 20.3 247 14-279 135-398 (467)
124 TIGR00886 2A0108 nitrite extru 99.3 3.2E-10 7E-15 102.7 17.5 154 120-284 3-169 (366)
125 PRK11043 putative transporter; 99.3 4.9E-10 1.1E-14 103.1 18.8 165 127-301 12-180 (401)
126 PLN00028 nitrate transmembrane 99.3 5E-10 1.1E-14 105.7 19.0 178 115-302 30-219 (476)
127 PF03137 OATP: Organic Anion T 99.3 9.7E-13 2.1E-17 124.9 0.3 185 1-185 151-373 (539)
128 TIGR00788 fbt folate/biopterin 99.2 7.8E-11 1.7E-15 110.8 13.0 261 5-279 134-415 (468)
129 PRK12382 putative transporter; 99.2 2.2E-10 4.9E-15 105.1 15.4 168 117-291 14-188 (392)
130 COG2271 UhpC Sugar phosphate p 99.2 7.7E-11 1.7E-15 105.6 11.7 175 122-306 29-210 (448)
131 PTZ00207 hypothetical protein; 99.2 1.4E-09 3.1E-14 103.8 20.9 182 1-184 130-421 (591)
132 PF01306 LacY_symp: LacY proto 99.2 1.3E-09 2.8E-14 99.3 19.6 263 26-306 137-404 (412)
133 PRK15011 sugar efflux transpor 99.2 9.6E-10 2.1E-14 101.1 18.8 178 114-301 12-193 (393)
134 TIGR02332 HpaX 4-hydroxyphenyl 99.2 8.8E-10 1.9E-14 102.1 18.6 167 124-301 14-188 (412)
135 TIGR00903 2A0129 major facilit 99.2 6.6E-10 1.4E-14 101.3 17.0 155 137-302 10-165 (368)
136 PRK03699 putative transporter; 99.2 2.1E-09 4.5E-14 98.9 20.0 167 120-297 9-178 (394)
137 TIGR00900 2A0121 H+ Antiporter 99.2 5.6E-10 1.2E-14 100.6 15.8 169 123-299 4-176 (365)
138 PRK03545 putative arabinose tr 99.2 8.1E-10 1.7E-14 101.4 17.0 170 120-300 11-182 (390)
139 TIGR00710 efflux_Bcr_CflA drug 99.2 9.3E-10 2E-14 100.3 17.1 157 133-300 20-178 (385)
140 KOG3626 Organic anion transpor 99.2 3E-10 6.5E-15 109.0 13.7 184 1-184 247-459 (735)
141 PRK11652 emrD multidrug resist 99.2 1.5E-09 3.2E-14 99.7 18.0 162 128-300 18-181 (394)
142 PRK10091 MFS transport protein 99.2 1.4E-09 3.1E-14 99.6 17.5 169 118-297 3-173 (382)
143 TIGR00897 2A0118 polyol permea 99.2 1.9E-09 4.1E-14 99.5 17.7 159 119-286 14-177 (402)
144 TIGR00712 glpT glycerol-3-phos 99.2 6.2E-10 1.3E-14 103.9 14.7 175 118-301 27-205 (438)
145 PF03825 Nuc_H_symport: Nucleo 99.2 1.5E-08 3.2E-13 93.3 23.5 184 112-305 201-399 (400)
146 PRK15403 multidrug efflux syst 99.2 1.9E-09 4.1E-14 99.9 17.3 143 145-297 42-186 (413)
147 TIGR00891 2A0112 putative sial 99.2 3.4E-09 7.4E-14 97.1 18.8 164 123-297 17-184 (405)
148 PRK15462 dipeptide/tripeptide 99.2 2.8E-08 6E-13 93.4 25.0 63 3-65 112-176 (493)
149 PRK03633 putative MFS family t 99.2 4.1E-09 8.9E-14 96.4 19.1 151 117-278 5-157 (381)
150 PRK10213 nepI ribonucleoside t 99.1 3.9E-09 8.4E-14 97.2 18.6 154 133-297 35-190 (394)
151 KOG0252 Inorganic phosphate tr 99.1 5.7E-11 1.2E-15 107.3 6.0 291 1-302 154-498 (538)
152 TIGR00890 2A0111 Oxalate/Forma 99.1 1.1E-09 2.3E-14 99.1 14.4 157 134-301 19-176 (377)
153 PRK10473 multidrug efflux syst 99.1 4.8E-09 1E-13 96.2 18.8 165 123-298 8-174 (392)
154 COG2270 Permeases of the major 99.1 2.4E-09 5.3E-14 96.2 16.0 277 8-301 132-428 (438)
155 TIGR00895 2A0115 benzoate tran 99.1 2.6E-09 5.7E-14 97.4 16.8 153 134-297 33-187 (398)
156 PRK14995 methyl viologen resis 99.1 5.9E-09 1.3E-13 98.9 19.4 168 123-301 11-181 (495)
157 TIGR00711 efflux_EmrB drug res 99.1 3.4E-09 7.4E-14 99.8 17.6 165 125-300 9-175 (485)
158 PRK11551 putative 3-hydroxyphe 99.1 5.3E-09 1.2E-13 96.3 18.1 163 126-299 23-187 (406)
159 TIGR00893 2A0114 d-galactonate 99.1 1.9E-09 4E-14 98.0 14.7 150 142-301 17-168 (399)
160 TIGR00881 2A0104 phosphoglycer 99.1 9.2E-10 2E-14 99.7 11.9 163 128-301 5-170 (379)
161 PRK15402 multidrug efflux syst 99.1 7.9E-09 1.7E-13 95.3 18.0 152 137-299 32-185 (406)
162 cd06174 MFS The Major Facilita 99.1 4.3E-09 9.4E-14 94.1 15.7 165 123-298 4-170 (352)
163 PRK11273 glpT sn-glycerol-3-ph 99.1 5E-09 1.1E-13 98.2 16.6 156 137-301 48-207 (452)
164 PRK03893 putative sialic acid 99.1 1E-08 2.2E-13 97.1 18.7 160 123-293 25-186 (496)
165 PRK12307 putative sialic acid 99.1 9E-09 2E-13 95.4 17.9 158 123-291 23-182 (426)
166 PRK09705 cynX putative cyanate 99.1 1E-08 2.3E-13 94.3 17.5 155 135-300 26-182 (393)
167 TIGR00902 2A0127 phenyl propri 99.1 6.5E-09 1.4E-13 95.2 15.9 163 122-294 8-171 (382)
168 PRK11195 lysophospholipid tran 99.1 5.7E-09 1.2E-13 96.0 15.3 170 117-300 2-172 (393)
169 PRK11102 bicyclomycin/multidru 99.0 5.8E-09 1.3E-13 95.0 15.1 154 136-300 9-164 (377)
170 PRK11128 putative 3-phenylprop 99.0 8.2E-09 1.8E-13 94.5 15.8 159 127-295 13-172 (382)
171 TIGR00892 2A0113 monocarboxyla 99.0 1.1E-08 2.3E-13 96.1 15.5 152 135-297 36-189 (455)
172 COG2223 NarK Nitrate/nitrite t 99.0 1.4E-08 3.1E-13 91.2 14.9 177 118-304 14-195 (417)
173 COG2814 AraJ Arabinose efflux 99.0 5.3E-08 1.2E-12 88.1 17.9 174 119-302 14-188 (394)
174 PRK15034 nitrate/nitrite trans 99.0 5E-08 1.1E-12 90.8 18.2 146 117-273 33-185 (462)
175 TIGR00885 fucP L-fucose:H+ sym 99.0 8.3E-08 1.8E-12 88.9 19.3 165 123-298 8-203 (410)
176 TIGR01299 synapt_SV2 synaptic 99.0 5.5E-08 1.2E-12 95.7 18.8 147 139-296 188-349 (742)
177 PF05977 MFS_3: Transmembrane 98.9 3.5E-08 7.6E-13 93.7 16.1 182 114-301 6-189 (524)
178 TIGR00896 CynX cyanate transpo 98.9 3.6E-08 7.7E-13 89.3 15.5 146 138-295 20-168 (355)
179 PRK10133 L-fucose transporter; 98.9 1.6E-07 3.5E-12 87.7 20.1 144 121-275 29-177 (438)
180 PRK06814 acylglycerophosphoeth 98.9 6E-08 1.3E-12 101.0 18.1 182 113-301 6-194 (1140)
181 PRK11902 ampG muropeptide tran 98.9 1.4E-07 3E-12 87.0 17.5 164 127-301 8-181 (402)
182 PRK09556 uhpT sugar phosphate 98.9 1.5E-08 3.2E-13 95.4 11.1 159 137-301 48-211 (467)
183 PRK11010 ampG muropeptide tran 98.8 2.3E-07 5.1E-12 87.9 18.0 174 115-300 9-193 (491)
184 TIGR00894 2A0114euk Na(+)-depe 98.8 4.9E-08 1.1E-12 91.8 13.0 145 148-302 70-219 (465)
185 TIGR00880 2_A_01_02 Multidrug 98.8 9.1E-08 2E-12 73.7 12.3 132 160-301 4-137 (141)
186 TIGR00879 SP MFS transporter, 98.8 1.6E-07 3.4E-12 87.7 16.1 136 153-295 70-210 (481)
187 TIGR00792 gph sugar (Glycoside 98.8 6.9E-08 1.5E-12 89.8 12.8 161 131-300 12-192 (437)
188 TIGR00806 rfc RFC reduced fola 98.8 4E-07 8.8E-12 84.1 17.1 158 138-307 45-208 (511)
189 PRK08633 2-acyl-glycerophospho 98.8 3.1E-07 6.8E-12 95.6 17.9 157 114-277 5-165 (1146)
190 PF01306 LacY_symp: LacY proto 98.7 6E-08 1.3E-12 88.5 9.5 71 115-185 4-74 (412)
191 PRK10406 alpha-ketoglutarate t 98.7 1.5E-06 3.2E-11 81.0 18.5 151 135-295 38-212 (432)
192 PRK10077 xylE D-xylose transpo 98.7 7.1E-07 1.5E-11 84.0 16.4 140 150-297 51-210 (479)
193 PTZ00207 hypothetical protein; 98.7 1.5E-06 3.2E-11 83.4 17.9 155 134-301 43-204 (591)
194 PRK10642 proline/glycine betai 98.7 2.2E-06 4.9E-11 81.2 19.2 152 135-296 32-207 (490)
195 PRK09952 shikimate transporter 98.7 3.4E-06 7.5E-11 78.8 20.0 159 125-294 29-212 (438)
196 COG3104 PTR2 Dipeptide/tripept 98.7 4.1E-07 8.9E-12 83.7 12.8 183 113-302 15-206 (498)
197 TIGR00889 2A0110 nucleoside tr 98.6 1.3E-06 2.8E-11 81.2 16.1 63 122-184 6-68 (418)
198 TIGR00901 2A0125 AmpG-related 98.6 1.3E-06 2.9E-11 79.0 15.9 150 139-299 9-175 (356)
199 TIGR02718 sider_RhtX_FptX side 98.6 1.6E-06 3.4E-11 79.6 15.4 172 122-301 5-183 (390)
200 PRK15075 citrate-proton sympor 98.6 4.6E-06 9.9E-11 77.8 18.4 156 123-289 20-199 (434)
201 TIGR01301 GPH_sucrose GPH fami 98.6 2.2E-06 4.8E-11 80.4 15.7 169 123-301 9-217 (477)
202 TIGR00805 oat sodium-independe 98.5 2.5E-06 5.4E-11 83.3 14.6 155 143-302 57-281 (633)
203 PF06609 TRI12: Fungal trichot 98.5 1.5E-05 3.2E-10 76.4 18.8 175 115-301 37-216 (599)
204 TIGR00898 2A0119 cation transp 98.5 1.2E-06 2.6E-11 83.2 11.2 141 145-298 115-260 (505)
205 TIGR00887 2A0109 phosphate:H+ 98.5 1.8E-05 3.8E-10 75.3 18.7 138 151-296 53-219 (502)
206 TIGR00880 2_A_01_02 Multidrug 98.4 2.8E-07 6.1E-12 70.9 5.0 70 2-71 62-131 (141)
207 KOG2816 Predicted transporter 98.4 3.3E-06 7.1E-11 78.9 12.1 260 5-276 126-391 (463)
208 PRK09669 putative symporter Ya 98.4 2.8E-06 6E-11 79.5 11.5 52 130-181 21-72 (444)
209 TIGR00883 2A0106 metabolite-pr 98.4 2.5E-05 5.4E-10 70.9 17.2 54 244-297 125-186 (394)
210 PRK10429 melibiose:sodium symp 98.4 6.9E-06 1.5E-10 77.5 13.3 58 128-185 16-77 (473)
211 TIGR00788 fbt folate/biopterin 98.3 1.3E-05 2.9E-10 75.5 14.2 174 121-303 29-210 (468)
212 COG3104 PTR2 Dipeptide/tripept 98.3 9.9E-05 2.1E-09 68.3 18.3 64 2-65 128-193 (498)
213 PF13347 MFS_2: MFS/sugar tran 98.3 4.3E-06 9.3E-11 77.8 9.8 163 131-302 14-198 (428)
214 KOG2532 Permease of the major 98.3 1.1E-05 2.5E-10 75.5 12.5 150 148-308 67-222 (466)
215 KOG1330 Sugar transporter/spin 98.2 1.7E-06 3.7E-11 78.9 5.8 147 145-301 59-208 (493)
216 KOG3764 Vesicular amine transp 98.2 6.5E-06 1.4E-10 73.8 9.2 143 149-301 101-246 (464)
217 PRK11462 putative transporter; 98.2 5.1E-05 1.1E-09 71.4 15.6 157 131-296 22-198 (460)
218 PF12832 MFS_1_like: MFS_1 lik 98.1 1.4E-05 3E-10 55.5 7.6 62 123-185 5-66 (77)
219 COG0738 FucP Fucose permease [ 98.1 0.00026 5.7E-09 63.9 16.8 141 126-276 19-165 (422)
220 COG2807 CynX Cyanate permease 98.1 0.00016 3.5E-09 64.4 15.1 151 145-305 38-189 (395)
221 PF03092 BT1: BT1 family; Int 98.1 3.9E-05 8.4E-10 71.6 11.7 50 22-71 119-168 (433)
222 PF03825 Nuc_H_symport: Nucleo 98.1 0.00019 4.2E-09 66.2 15.9 62 122-184 6-67 (400)
223 KOG0255 Synaptic vesicle trans 98.1 4.9E-05 1.1E-09 72.6 12.0 138 147-297 111-250 (521)
224 PF06963 FPN1: Ferroportin1 (F 98.0 0.00028 6.1E-09 65.4 16.3 243 21-270 143-411 (432)
225 PRK09848 glucuronide transport 98.0 0.00013 2.7E-09 68.4 14.0 54 130-183 20-73 (448)
226 KOG2504 Monocarboxylate transp 98.0 0.0001 2.2E-09 70.1 12.1 165 121-295 45-214 (509)
227 KOG2615 Permease of the major 97.9 5.7E-05 1.2E-09 67.5 8.9 130 135-276 45-181 (451)
228 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00038 8.2E-09 68.1 14.9 164 133-303 2-183 (654)
229 COG2211 MelB Na+/melibiose sym 97.8 0.00039 8.5E-09 64.6 13.2 176 128-308 22-212 (467)
230 KOG0569 Permease of the major 97.8 0.0012 2.6E-08 61.9 16.4 154 139-300 39-203 (485)
231 PF07672 MFS_Mycoplasma: Mycop 97.8 0.00036 7.8E-09 59.4 11.3 97 22-127 1-103 (267)
232 PF06813 Nodulin-like: Nodulin 97.5 0.0038 8.2E-08 53.6 13.9 134 134-277 18-157 (250)
233 KOG2325 Predicted transporter/ 97.5 0.0025 5.4E-08 59.6 13.3 46 7-52 145-190 (488)
234 KOG0254 Predicted transporter 97.4 0.0032 7E-08 60.1 13.7 130 156-297 91-225 (513)
235 PF01770 Folate_carrier: Reduc 97.2 0.1 2.2E-06 48.0 20.3 173 10-183 112-314 (412)
236 PF03092 BT1: BT1 family; Int 97.2 0.0028 6.2E-08 59.2 10.2 152 143-302 14-175 (433)
237 KOG2816 Predicted transporter 97.1 0.022 4.7E-07 53.6 15.5 126 164-301 72-198 (463)
238 PF05631 DUF791: Protein of un 97.1 0.062 1.3E-06 48.2 16.9 38 147-184 62-99 (354)
239 TIGR00926 2A1704 Peptide:H+ sy 97.1 0.11 2.4E-06 51.1 20.2 72 2-73 96-177 (654)
240 PF11700 ATG22: Vacuole efflux 97.1 0.057 1.2E-06 51.1 17.7 55 250-304 187-249 (477)
241 KOG2533 Permease of the major 97.0 0.0041 8.9E-08 58.8 9.7 152 146-306 73-231 (495)
242 KOG3810 Micronutrient transpor 97.0 0.041 8.8E-07 49.1 14.6 279 11-301 114-420 (433)
243 PF05631 DUF791: Protein of un 96.8 0.027 5.8E-07 50.5 12.3 145 21-180 156-304 (354)
244 PF03209 PUCC: PUCC protein; 96.8 0.019 4.1E-07 52.4 11.4 134 144-280 5-154 (403)
245 TIGR00769 AAA ADP/ATP carrier 96.5 0.78 1.7E-05 43.3 25.1 165 12-184 150-333 (472)
246 KOG0252 Inorganic phosphate tr 96.2 0.01 2.2E-07 54.8 6.1 37 151-187 81-117 (538)
247 KOG3762 Predicted transporter 96.1 0.29 6.3E-06 46.4 15.0 184 113-307 366-555 (618)
248 KOG3098 Uncharacterized conser 96.0 0.61 1.3E-05 43.7 16.5 46 1-46 112-157 (461)
249 PF06963 FPN1: Ferroportin1 (F 95.9 0.95 2.1E-05 42.2 17.7 66 119-184 3-68 (432)
250 PF00083 Sugar_tr: Sugar (and 95.9 0.00034 7.4E-09 65.3 -5.1 128 156-294 48-184 (451)
251 PF06779 DUF1228: Protein of u 95.9 0.056 1.2E-06 38.0 7.2 51 131-182 5-55 (85)
252 KOG2325 Predicted transporter/ 95.9 0.095 2.1E-06 49.2 10.9 41 143-183 59-100 (488)
253 PF02487 CLN3: CLN3 protein; 95.9 0.25 5.3E-06 45.5 13.3 50 17-71 137-188 (402)
254 PRK03612 spermidine synthase; 95.8 1 2.2E-05 43.2 17.8 53 128-180 24-76 (521)
255 PF03219 TLC: TLC ATP/ADP tran 95.7 2 4.3E-05 40.8 20.9 165 13-184 166-349 (491)
256 KOG0253 Synaptic vesicle trans 95.6 0.3 6.5E-06 44.3 12.4 49 137-185 96-144 (528)
257 KOG2563 Permease of the major 95.5 0.3 6.6E-06 45.2 12.1 128 143-278 69-203 (480)
258 COG0477 ProP Permeases of the 95.1 0.035 7.6E-07 47.5 5.0 69 1-69 104-176 (338)
259 PF00854 PTR2: POT family; In 95.0 0.031 6.8E-07 51.0 4.4 69 2-70 44-115 (372)
260 COG2270 Permeases of the major 94.9 0.44 9.5E-06 43.8 11.3 163 137-305 34-223 (438)
261 COG0477 ProP Permeases of the 94.4 2.7 5.8E-05 35.6 15.6 144 137-290 21-173 (338)
262 KOG3762 Predicted transporter 94.4 0.04 8.8E-07 51.9 3.6 72 1-72 469-541 (618)
263 KOG0637 Sucrose transporter an 94.2 0.25 5.3E-06 45.9 8.2 49 10-62 161-210 (498)
264 COG3202 ATP/ADP translocase [E 93.6 6.6 0.00014 37.0 18.6 39 14-52 171-209 (509)
265 TIGR01272 gluP glucose/galacto 92.1 0.18 4E-06 44.8 4.0 59 2-62 241-299 (310)
266 TIGR00769 AAA ADP/ATP carrier 91.5 12 0.00026 35.5 15.4 33 244-276 158-190 (472)
267 KOG3574 Acetyl-CoA transporter 90.9 5.9 0.00013 36.4 12.0 164 111-277 258-431 (510)
268 PF00854 PTR2: POT family; In 90.7 3.3 7.2E-05 37.7 10.9 59 246-304 67-125 (372)
269 PF06813 Nodulin-like: Nodulin 87.7 1.3 2.7E-05 38.2 5.4 49 4-53 109-157 (250)
270 PF05978 UNC-93: Ion channel r 87.5 13 0.00027 29.5 15.1 29 156-184 38-67 (156)
271 PF02990 EMP70: Endomembrane p 87.5 5.1 0.00011 38.5 10.0 70 112-183 252-322 (521)
272 KOG0637 Sucrose transporter an 86.3 1.5 3.3E-05 40.8 5.4 64 124-188 38-105 (498)
273 KOG4686 Predicted sugar transp 85.6 0.82 1.8E-05 40.1 3.1 57 13-69 374-434 (459)
274 KOG1237 H+/oligopeptide sympor 82.9 49 0.0011 32.3 15.0 172 128-300 47-243 (571)
275 PF13000 Acatn: Acetyl-coenzym 82.5 42 0.00091 32.0 13.0 34 244-277 434-467 (544)
276 PF05978 UNC-93: Ion channel r 82.4 1.6 3.4E-05 34.7 3.3 50 1-50 99-148 (156)
277 TIGR00939 2a57 Equilibrative N 78.3 37 0.00079 31.9 11.5 261 2-271 117-428 (437)
278 PF01770 Folate_carrier: Reduc 75.8 69 0.0015 29.8 14.4 46 139-184 24-71 (412)
279 PF03137 OATP: Organic Anion T 75.7 0.83 1.8E-05 44.0 -0.2 48 135-182 19-66 (539)
280 KOG3626 Organic anion transpor 67.1 81 0.0018 31.7 11.2 49 136-184 114-162 (735)
281 KOG3574 Acetyl-CoA transporter 55.5 1.8E+02 0.0039 27.2 11.1 67 118-188 31-102 (510)
282 PRK03612 spermidine synthase; 52.0 24 0.00053 33.9 4.8 65 5-70 124-189 (521)
283 PF01733 Nucleoside_tran: Nucl 49.9 4.9 0.00011 35.6 -0.2 40 2-46 8-47 (309)
284 KOG1479 Nucleoside transporter 47.2 2.4E+02 0.0052 26.2 16.7 68 231-299 132-201 (406)
285 COG5336 Uncharacterized protei 46.6 86 0.0019 23.1 5.7 31 247-277 38-68 (116)
286 KOG1278 Endosomal membrane pro 43.5 27 0.00059 33.4 3.5 35 148-182 352-387 (628)
287 PF04226 Transgly_assoc: Trans 43.0 56 0.0012 20.1 3.8 31 41-71 5-39 (48)
288 COG5336 Uncharacterized protei 42.4 1.2E+02 0.0025 22.4 5.8 22 162-183 50-71 (116)
289 COG1288 Predicted membrane pro 40.1 3.3E+02 0.0071 25.7 13.3 31 54-84 216-247 (481)
290 KOG1237 H+/oligopeptide sympor 39.6 47 0.001 32.4 4.7 68 2-69 163-236 (571)
291 KOG4332 Predicted sugar transp 38.8 13 0.00028 32.6 0.6 42 144-185 62-103 (454)
292 PF10183 ESSS: ESSS subunit of 37.8 29 0.00063 25.4 2.3 30 51-80 54-83 (105)
293 PF11872 DUF3392: Protein of u 35.7 1.8E+02 0.0038 21.4 6.0 18 131-148 62-79 (106)
294 PF05232 BTP: Bacterial Transm 32.7 1.5E+02 0.0033 19.7 5.5 41 144-184 24-64 (67)
295 PF09605 Trep_Strep: Hypotheti 32.5 2.1E+02 0.0045 23.3 6.8 25 160-184 158-182 (186)
296 PF11299 DUF3100: Protein of u 32.0 78 0.0017 26.8 4.1 47 2-49 182-228 (241)
297 PF13940 Ldr_toxin: Toxin Ldr, 31.8 65 0.0014 18.1 2.4 20 161-180 15-34 (35)
298 PF12832 MFS_1_like: MFS_1 lik 31.6 1E+02 0.0023 20.9 4.2 37 26-62 34-70 (77)
299 KOG2601 Iron transporter [Inor 31.3 4.4E+02 0.0096 24.6 12.1 64 122-185 31-94 (503)
300 KOG3098 Uncharacterized conser 30.2 4.8E+02 0.01 24.8 13.0 56 129-184 20-80 (461)
301 PRK11588 hypothetical protein; 30.2 5.1E+02 0.011 25.0 12.4 11 54-64 229-239 (506)
302 KOG1479 Nucleoside transporter 29.5 4.7E+02 0.01 24.4 9.7 42 139-180 264-309 (406)
303 TIGR02185 Trep_Strep conserved 29.0 3.2E+02 0.0069 22.3 8.3 23 162-184 163-185 (189)
304 TIGR03716 R_switched_YkoY inte 26.5 2.7E+02 0.0059 23.3 6.5 48 6-53 8-55 (215)
305 PF13493 DUF4118: Domain of un 24.7 1.2E+02 0.0026 21.6 3.8 22 163-184 84-105 (105)
306 TIGR03717 R_switched_YjbE inte 23.9 3.8E+02 0.0082 21.6 6.8 45 8-52 15-59 (176)
307 TIGR03718 R_switched_Alx integ 23.8 2.5E+02 0.0054 25.0 6.0 52 12-65 82-135 (302)
308 PRK04949 putative sulfate tran 23.1 4.8E+02 0.01 22.4 7.6 20 164-183 92-111 (251)
309 PF07857 DUF1632: CEO family ( 21.9 5.2E+02 0.011 22.3 8.6 16 134-149 194-209 (254)
310 PF12273 RCR: Chitin synthesis 21.5 58 0.0013 24.7 1.5 11 57-67 1-11 (130)
311 KOG3880 Predicted small molecu 21.1 2.3E+02 0.0049 25.7 5.2 44 28-71 147-192 (409)
312 PRK02237 hypothetical protein; 20.6 2.5E+02 0.0054 20.7 4.5 41 136-182 44-84 (109)
313 KOG4830 Predicted sugar transp 20.3 94 0.002 27.3 2.6 48 137-185 36-92 (412)
314 PF13386 DsbD_2: Cytochrome C 20.1 4.8E+02 0.01 21.2 14.8 36 149-184 145-180 (199)
No 1
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=301.29 Aligned_cols=307 Identities=38% Similarity=0.765 Sum_probs=269.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-cCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
||+++|..+|+...+.++|+|++||++..++..++..+|.+++.+++|++.+. +|||++|++.|.+++++.++|+....
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999 99999999999999999888888889
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCC--CCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchh
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPV--KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 157 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g 157 (309)
|+|+++|..+++|++.+++++.+++.+ .++||++++++|.+|.+++..++.+++.+.+.+|+|+|+++++|++..+.|
T Consensus 218 d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G 297 (466)
T KOG2532|consen 218 DSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETG 297 (466)
T ss_pred CCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhh
Confidence 999999999999988876654433322 478999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC--chHHHHHHHHHHHhhhhhhhc
Q 021674 158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGTDAFSQS 235 (309)
Q Consensus 158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 235 (309)
++.+++.+.+.+..+++|+++||+.+|.++.+..||.+..+++.+.++++..+...+ ....++.++.++.+...+...
T Consensus 298 ~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~ 377 (466)
T KOG2532|consen 298 FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNIS 377 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchh
Confidence 999999999999999999999999877666777788888888888777766555433 344555555555555556666
Q ss_pred chhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHHHHHHHHHHhhcCCccc
Q 021674 236 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFSTGEKV 307 (309)
Q Consensus 236 ~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (309)
+.+.+..+..|++.+..+|+.|..+.+.++++|.++|.+... .+|+.+|++.+++++++.+++.++.++|+.
T Consensus 378 Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~ 452 (466)
T KOG2532|consen 378 GFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPA 452 (466)
T ss_pred hhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCccc
Confidence 777777776899999999999999999999999999999943 479999999999999999999999766653
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=249.96 Aligned_cols=292 Identities=18% Similarity=0.245 Sum_probs=212.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhH--HHHhhhcCCcchhHhhhhHHHHHHHHHHhhc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--PFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 78 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~--~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~ 78 (309)
+|..+|..+|++.+.+++|||++|||+..++|+.+.++|+.+.+++. +++.++++||..|+..+++++++.++.++..
T Consensus 127 ng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 127 NGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 36778899999999999999999999999999999999999999999 9999999999999999999988877777778
Q ss_pred ccCCCCCCCCCHHHHHH--HHhccCCCCCCCCC-----ChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674 79 HSSPAEDPQLRPAEKKL--IVSSCASKEPVKTI-----PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 151 (309)
Q Consensus 79 ~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~ 151 (309)
+|+|++.. +++.|+.. ..+...++++.+.. -++.++|||..|.+.+.+.+.+...|++..|.|.|+.|++|+
T Consensus 207 rd~Pqs~G-LP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~ 285 (448)
T COG2271 207 RDRPQSEG-LPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF 285 (448)
T ss_pred CCCccccC-CCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC
Confidence 88887542 22211110 00000001111111 235678999999999999999999999999999999999999
Q ss_pred CccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc--CchHHHHH-HHHHHHh
Q 021674 152 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV--DSPAMAVL-CMACSQG 228 (309)
Q Consensus 152 s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~ 228 (309)
|..++....+...+++..|+++.||+|||+.+.+ |..+..+.+++..+++...+.. ++..+... +...++.
T Consensus 286 s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~ 359 (448)
T COG2271 286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFL 359 (448)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997433 2222223333333333333332 22233222 2222322
Q ss_pred h-hhhhhcchhhhhhccCCC-chHHHHHHHhHhHhh-hhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 229 T-DAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 229 ~-~~~~~~~~~~~~~~~~~~-~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
. ++-..-++ ...|..|+ ..|+|.|+.+..+++ |.+.+....|++.|..+|...|.+..+..+++.+....+
T Consensus 360 IyGPqmLiGl--~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 360 IYGPQMLIGL--AAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred HhhHHHHHHH--HHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 1 11111112 22456664 689999999999999 778899999999999889999988777777666554444
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.1e-31 Score=251.87 Aligned_cols=305 Identities=31% Similarity=0.567 Sum_probs=223.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-CCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
||+++|...|...++++||+|++||++++++..++.++|.++++++++++.+.+ |||+.|++.+++++++.++++...+
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 589999999999999999999999999999999999999999999999999984 9999999988888777666666666
Q ss_pred cCCCCCCCCCHHHHHHHHhccC-CC-CCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchh
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCA-SK-EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 157 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g 157 (309)
|+|+++++.+++|++...+... ++ +..++.++++++|+|.+|......++.+++.+.+.+|+|.|+++.+|++..+++
T Consensus 221 ~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g 300 (465)
T TIGR00894 221 DDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENG 300 (465)
T ss_pred CCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhH
Confidence 7776655544444433221111 11 111245688999999999999999999999999999999999999999999999
Q ss_pred hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhh-HHHHHHHHhhHHHHHHHHHhhc-cCchHHHHHHHHHHHhhhhhhhc
Q 021674 158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT-VRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQS 235 (309)
Q Consensus 158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
+...++.++..++.+++|+++||.++|+..... .++................... .++....+.++..+.+.......
T Consensus 301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 380 (465)
T TIGR00894 301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLA 380 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999999999876543322 2222222222111111111111 22333333333222222111122
Q ss_pred chhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674 236 GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFSTGE 305 (309)
Q Consensus 236 ~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (309)
.......+..|+.+|.+.++.|+.+++++.++|.+.|.+.|. ++|..+|.+.+++.+++.+....+.+++
T Consensus 381 ~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 453 (465)
T TIGR00894 381 GVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAE 453 (465)
T ss_pred hhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecce
Confidence 233334566788999999999999999999999999999886 3488889888888888877766655444
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-29 Score=225.85 Aligned_cols=274 Identities=23% Similarity=0.293 Sum_probs=203.8
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|+.+|..++....+..+..||+||+++++++..+.+++.++|.|+|.++.|++|||+.|++.+.++++..+..++..|
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-- 189 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-- 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 678899999999999999999999999999999999999999999999999999999999999998876554444444
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
|++.++-+ +.+..+..+++|+|+.|......++.+.++|..++|+-+++++..|+|....++.+.
T Consensus 190 ~~~~~~~~---------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll 254 (394)
T COG2814 190 PSEISGSL---------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLL 254 (394)
T ss_pred CccCCCCC---------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHH
Confidence 22211100 000112346899999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH-hhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI-GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYS 239 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (309)
..++++.+|+.++|+++|| +.|+ .+... .++....... ....+++...... ..+++......+. ...
T Consensus 255 ~~Gv~~~~Gn~~gGrl~dr-~~~~--------~l~~~~~l~a~~~l~l-~~~~~~~~~~~~~~~~wg~a~~~~~~~-~~~ 323 (394)
T COG2814 255 AFGIAGFIGNLLGGRLADR-GPRR--------ALIAALLLLALALLAL-TFTGASPALALALLFLWGFAFSPALQG-LQT 323 (394)
T ss_pred HHHHHHHHHHHHHhhhccc-cchh--------HHHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHhhhhhhH-HHH
Confidence 9999999999999999999 5442 11111 1111111111 1122233332222 2233332222111 222
Q ss_pred hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674 240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 303 (309)
Q Consensus 240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (309)
...+..|+.+..+.++++...|+|-.+|..++|.++|+.++....++.+.+.+++.+....-.+
T Consensus 324 ~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 324 RLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2233567899999999999999999999999999999999999999888888777655444433
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=2.1e-29 Score=236.49 Aligned_cols=292 Identities=17% Similarity=0.138 Sum_probs=199.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc---CCcchhHhhhhHHHHHHHHHHhh
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GWPSVFYSFGSLGTVWFTVWLSK 77 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~---gWr~~F~i~~~~~~v~~~~~~~~ 77 (309)
+|+++|...|...+++++|+|++|||+++|++..+.++|.++++++..++.+++ +||..|.+.+++++++.++++..
T Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 132 SGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999999999999999999988877764 69999998888887765555555
Q ss_pred cccCCCCCCCCCHHHHHH-H-HhccCCCCCCCCCC-----hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhC
Q 021674 78 AHSSPAEDPQLRPAEKKL-I-VSSCASKEPVKTIP-----WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLH 150 (309)
Q Consensus 78 ~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g 150 (309)
.+|+|++.+..+++|... . .+++.+++. ++.+ .++++|||.+|...+..++.....++..+|+|.|+++++|
T Consensus 212 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g 290 (467)
T PRK09556 212 GSDSPEELGWGKAEEIFGEPISEEDKETES-TDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELG 290 (467)
T ss_pred CCCChhhcCCCChhhcccCccchhhhcccc-ccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 566665433222221000 0 000000000 0111 1236899999998888888888888999999999999999
Q ss_pred CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhh
Q 021674 151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGT 229 (309)
Q Consensus 151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (309)
+|..++++......++..++.+++|+++||+++|+.... ...... ...........++.... +..+..+...
T Consensus 291 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 291 FSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA------CIALAL-IIFTLGVYQHATSEYMYLASLFALGFLV 363 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH------HHHHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 999999999998999999999999999999987642111 001111 11111111122233222 2222222211
Q ss_pred hhhhhcchhhh-hhccCCCchHHHHHHHhHhHhh-hhhHHHhHHHhhcc------------cCCchHHHHHHHHHHHHHH
Q 021674 230 DAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQ------------HGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 230 ~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~------------~~~~~~~~~~~~~~~~~~~ 295 (309)
.... ...... .+..+++.+|++.|+.|..+++ |++++|.+.|++.| ..+|+..|.+..++.+++.
T Consensus 364 ~~~~-~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~ 442 (467)
T PRK09556 364 FGPQ-LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCI 442 (467)
T ss_pred hhHH-HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHH
Confidence 1111 111111 2334556899999999999997 66999999999999 5679999988877777776
Q ss_pred HHHHhh
Q 021674 296 AVWNLF 301 (309)
Q Consensus 296 ~~~~~~ 301 (309)
+....+
T Consensus 443 ~~~~~~ 448 (467)
T PRK09556 443 CLMAIV 448 (467)
T ss_pred HHHHHH
Confidence 555544
No 6
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=8.5e-29 Score=225.22 Aligned_cols=273 Identities=14% Similarity=0.060 Sum_probs=185.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|+|+|. .+.....++||+|+|||++++++...+.++|.++++++++++.+++|||+.|++.++++++..++++...||
T Consensus 89 ~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 89 AALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred HHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5788885 566667779999999999999999999999999999999999999999999999888887765556656777
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+|+++++..+. ++ . ..++++++|||.+|.+...+++.....|++.+|+|+|+++ +|+|.. .+...
T Consensus 168 ~p~~~~~~~~~-~~----------~--~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~ 232 (368)
T TIGR00903 168 LPFQAAEGFGF-KD----------A--VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAV 232 (368)
T ss_pred CCCCCCCCcch-HH----------H--HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHH
Confidence 66543211000 00 0 0136788999999999999999999999999999999965 688864 66666
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
.++.+.+.++ .++++||..||+.+....+. . ....+.........+++...+.++...........+..+..
T Consensus 233 ~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~----~-~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (368)
T TIGR00903 233 ALAILAGLIG---VAVIPDRVARAGLRSIYIRA----A-ALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDW 304 (368)
T ss_pred HHHHHHHHHH---HHHhhHHhhhhhhHHHHHHH----H-HHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 6666555544 58999998765422111111 1 11111111111222223332222222111111111223333
Q ss_pred hhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674 241 HQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 241 ~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
..|..| +.||++.|+.|..+++++..+|.+.+.+++ +.+..|.+.+++.+++++...
T Consensus 305 ~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 305 IGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 345444 689999999999999999999999998884 566777777777777766644
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.5e-28 Score=228.64 Aligned_cols=293 Identities=15% Similarity=0.133 Sum_probs=193.8
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|+++|..+|...+++.||+|+|||++++++++.+.++|.++++++.+++.+++|||+.|++.+++.++..+......+|+
T Consensus 122 g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 122 AFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 67788888999999999999999999999999999999999999999999999999999988877655433333344555
Q ss_pred CCCC--CCCCHHHHHHHHhccCCCCCCCCCChh-----HhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674 82 PAED--PQLRPAEKKLIVSSCASKEPVKTIPWG-----LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 154 (309)
Q Consensus 82 p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~ 154 (309)
|++. ++.++.+++. .+...++ +.++.+++ ..+|+|++|......++.....+++.+|+|+|+++++|+|..
T Consensus 202 p~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 279 (434)
T PRK11663 202 PQAMGLPSVGEWRHDA-LELAQQQ-EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLV 279 (434)
T ss_pred HhhcCCCCcccccccc-cccchhc-cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHH
Confidence 4322 1110000000 0000000 00011222 256789999887777777777788899999999888999999
Q ss_pred chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh
Q 021674 155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS 233 (309)
Q Consensus 155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (309)
+++...+...+++.++.++.|+++||+.+|++... ..............+... ...+.... ..+...++.....
T Consensus 280 ~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~- 354 (434)
T PRK11663 280 TANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPM---NLIFAAGILLSVGSLWLM-PFASYVMQAACFFTIGFFVFGP- 354 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHH---HHHHHHHHHHHHHHHHHc-ccccHHHHHHHHHHHHHHHhhH-
Confidence 99999999999999999999999999954332111 011111111111111111 11222221 1122222111100
Q ss_pred hcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 234 QSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 234 ~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
.........| .+++.++.++|+.|+..++|++++|.+.|++.|+.+|...|.+.+++.+++++.....
T Consensus 355 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 355 QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPF 423 (434)
T ss_pred HHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 1111112233 3457899999999999999999999999999999889999998888877776555443
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=2.4e-27 Score=215.82 Aligned_cols=296 Identities=25% Similarity=0.412 Sum_probs=202.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...|...+++.|++|+|||++++++.....++|.++++++++++.++.+||+.|++.+++.++..+..+...+|
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPD 171 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecC
Confidence 47888899999999999999999999999999999999999999999999999999999998877766554443333444
Q ss_pred CCCCCCCCCHHHHHHHHhc----c--CCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674 81 SPAEDPQLRPAEKKLIVSS----C--ASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 154 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~ 154 (309)
+|+++++.++++++...++ . .++++.+..+.++++|+|+++......++.....+...+|+|.|+++.+|+|..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (399)
T TIGR00893 172 PPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSIL 251 (399)
T ss_pred CCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHH
Confidence 4433222222222111110 0 011111223456788999999888888888888889999999999999999999
Q ss_pred chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhh
Q 021674 155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 234 (309)
Q Consensus 155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
+.+.+.....++..++.++.|+++||+++|+........ ...................+...........+..... ..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 329 (399)
T TIGR00893 252 EAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARK-TAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AG 329 (399)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH-HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hh
Confidence 999999999999999999999999999987532221111 1111111111111111111222222222222211111 12
Q ss_pred cchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHHHHHHHHH
Q 021674 235 SGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 235 ~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~ 298 (309)
+..+....| .++++++.+.++.+...++++.++|.+.|.+.|..+ |...|.+.+++.+++.+..
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 330 AIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 222333333 456789999999999999999999999999999866 8888888777776665544
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.96 E-value=5.9e-28 Score=223.25 Aligned_cols=280 Identities=19% Similarity=0.282 Sum_probs=189.0
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh------hcCCcchhHhhhhHHHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH------RFGWPSVFYSFGSLGTVWFTVW 74 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~------~~gWr~~F~i~~~~~~v~~~~~ 74 (309)
+|+++|+..|...++++||+|+|||++++++++.+.++|.++++++++++.+ ..|||++|++.++++++...+.
T Consensus 106 ~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 106 VGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999999998874 4799999999888776654444
Q ss_pred HhhcccCCCCCCCCCHHHHHHHHh----ccCC-CCC-----CCCC----ChhHhhcchHHHHHHHHHHHHHHHHHHHHHh
Q 021674 75 LSKAHSSPAEDPQLRPAEKKLIVS----SCAS-KEP-----VKTI----PWGLILSKPPVWALIVSHFCHNWGTFILLTW 140 (309)
Q Consensus 75 ~~~~~~~p~~~~~~~~~~~~~~~~----~~~~-~~~-----~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w 140 (309)
....+|+|++.+..+++|++...+ +..+ +++ .++. .++++ ++|.+|.....+++....++++.+|
T Consensus 186 ~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
T TIGR02332 186 WFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIW 264 (412)
T ss_pred hhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHH
Confidence 445577765443333333321110 1000 000 0011 23443 3577888888888888889999999
Q ss_pred HHHHHHH-HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH
Q 021674 141 MPTYYNQ-VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA 219 (309)
Q Consensus 141 lp~~l~~-~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (309)
+|+|+++ ..|+|..+++.+..+..++..++.++.|+++||+++|+.... .........+.+.. ..+++...
T Consensus 265 ~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~------~~~~~~~~~~~~~~--~~~~~~~~ 336 (412)
T TIGR02332 265 TPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTA------LPYLFAAAGWLLAS--ATDHNLIQ 336 (412)
T ss_pred HHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHH------HHHHHHHHHHHHHH--hcCCHHHH
Confidence 9999987 347888899999999999999999999999999986531111 00001111111111 12222222
Q ss_pred HH-HHHHHHhhhhhhhcch-hhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHH
Q 021674 220 VL-CMACSQGTDAFSQSGL-YSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLY 291 (309)
Q Consensus 220 ~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~ 291 (309)
.. +.....+. ...... +.... ..++++++++.|+.|..+++|++++|.+.|.+.|. ++|+..+.+.+++.
T Consensus 337 ~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 337 LLGIIMASMGS--FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHHHHHh--hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 11 11111111 111111 12222 34567899999999999999999999999999998 56998887666544
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=8.3e-27 Score=213.98 Aligned_cols=273 Identities=15% Similarity=0.165 Sum_probs=195.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
||++.+...|...+++.|++|+|||++++|++..+.++|..+++++++.+.+++|||+.|++.+++.++......+..||
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPL 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46777888899999999999999999999999999999999999999999999999999999888776654333333343
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+|++++ + + ..+.++++|||.++......++.....+...+|+|+|+++.+|+|..+.+.+.
T Consensus 187 ~~~~~~---~--------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 247 (390)
T PRK03545 187 LPSEHS---G--------------S--LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLL 247 (390)
T ss_pred CCCCCc---c--------------h--HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 222110 0 0 01245678999888776666666667777889999999988999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (309)
....++..+++++.|+++||+++|. ............... ....++.... ......+.+..... .....
T Consensus 248 ~~~~~~~~~g~~~~g~l~dr~~~~~--------~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~l~g~~~~~~~-~~~~~ 317 (390)
T PRK03545 248 LLFGGAGIIGSVLFSRLGNRHPSGF--------LLIAIALLLVCLLLL-LPAANSEWHLSVLSIFWGIAIMCIG-LAMQV 317 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHHHHH-HHHhchHHHHHHHHHHHHHHHhcch-HHHHH
Confidence 9899999999999999999987542 111111111111111 1122223222 22222232221111 11222
Q ss_pred hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
...+..|+.++.+.++.+...++|..+||.+.|.+.|+.+++..|...+.+.+++.+......
T Consensus 318 ~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 318 KVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 333456778899999999999999999999999999998999999988888887776655555
No 11
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=1.8e-26 Score=214.69 Aligned_cols=283 Identities=14% Similarity=0.110 Sum_probs=182.2
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT 72 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~ 72 (309)
||+|+|+++|.+.++++|++|+||||++.++...+...|..+++.+...+. +.+|||++|++.++++++.
T Consensus 134 ~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-- 211 (432)
T PRK10406 134 QGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-- 211 (432)
T ss_pred HHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH--
Confidence 699999999999999999999999999999999998888888887665543 3689999999877666554
Q ss_pred HHHhh-cccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHhC
Q 021674 73 VWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC-HNWGTFILLTWMPTYYNQVLH 150 (309)
Q Consensus 73 ~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~wlp~~l~~~~g 150 (309)
++++. .+|+|+ .|++. +++ ..++++++|+++.|......++ ....+|++.+|+|+|+++.+|
T Consensus 212 ~~~~~~~~e~~~-------~~~~~-------~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g 275 (432)
T PRK10406 212 LWLRRQLDETSQ-------QETRA-------LKE--AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAG 275 (432)
T ss_pred HHHHhcCCCCch-------HHHhh-------hcc--cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 22322 233221 11110 001 2357788999988876555444 366788999999999999899
Q ss_pred CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHH-HHHHhhccCchHHHHHHHHHHHhh
Q 021674 151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAF-FLTQLSHVDSPAMAVLCMACSQGT 229 (309)
Q Consensus 151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
++..+.+....+..++..++.++.|+++||++||+... ...+....... ........+++...+.+...+...
T Consensus 276 ~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (432)
T PRK10406 276 MHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML------CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLI 349 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH------HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 99989988888888888889999999999998763111 00110100111 111111222333222222111111
Q ss_pred hhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhh-hhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCccc
Q 021674 230 DAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV 307 (309)
Q Consensus 230 ~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (309)
.............| .+++.|+++.|+.|..+++ .+...|.+.+.+-+.+.|...+...+++.+++.+...+..+|+|.
T Consensus 350 ~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~~~~ 429 (432)
T PRK10406 350 VSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKG 429 (432)
T ss_pred HHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 11111112222233 4567899999999988875 355688888855333557667776666776666665666666554
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=4.2e-26 Score=213.37 Aligned_cols=290 Identities=17% Similarity=0.215 Sum_probs=183.1
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHH-hhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT-GLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~l-g~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
+|+++|...|...+.+.+|+|+|+|++++++++.+.++|..+ ++.++..+....|||+.|++.+++.++..++.+...+
T Consensus 130 ~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~ 209 (452)
T PRK11273 130 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMR 209 (452)
T ss_pred HHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 367788888988899999999999999999999999998755 4444434444569999999988776665444444455
Q ss_pred cCCCCCCCCCHHHHHH-HHhccCCCCCCCCCCh-----hHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCc
Q 021674 80 SSPAEDPQLRPAEKKL-IVSSCASKEPVKTIPW-----GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 153 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~ 153 (309)
|+|++.+..+++|.+. ..++..+++. ++.+. +.++|+|.+|...+..++.+...++..+|+|.|+++++|++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~ 288 (452)
T PRK11273 210 DTPQSCGLPPIEEYKNDYPDDYNEKHE-QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL 288 (452)
T ss_pred CCHhhcCCCChhhhhhccccccccccC-CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 5554321111111000 0000000000 01111 236789999988888888877888999999999999999999
Q ss_pred cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhh
Q 021674 154 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAF 232 (309)
Q Consensus 154 ~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (309)
.+++.+..+..++..++.++.|+++||++++++... .+....+..............++... +.....+......
T Consensus 289 ~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 364 (452)
T PRK11273 289 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGP 364 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchH----HHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhH
Confidence 999988888888999999999999999964332111 01111111111111111112222222 2222222211111
Q ss_pred hhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhH-HHhHHHhhcccCCchHHHHHHHHHHHHHHH
Q 021674 233 SQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVF-GTAATGYILQHGSWDDVFKVSVGLYLVGTA 296 (309)
Q Consensus 233 ~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 296 (309)
...... ..+..+++.+|.++|+.+..+++++.+ +|.+.|++.|+.+|+..|++..++.+++++
T Consensus 365 -~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~ 429 (452)
T PRK11273 365 -VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVI 429 (452)
T ss_pred -HHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 111111 123345678999999999999998875 799999999997899999877666665543
No 13
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.95 E-value=2.2e-26 Score=214.42 Aligned_cols=299 Identities=17% Similarity=0.251 Sum_probs=192.4
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-hcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
|+++|..+|.....+.|++|+|||++++++.+++.++|..+++++.+...+ +.|||+.|++.+++.++..+..+...+|
T Consensus 129 g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 667788888889999999999999999999999999999999988776544 5799999999888776644333334455
Q ss_pred CCCCCCCCCHHHHHHH-HhccCCCCCCCCCC-----hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674 81 SPAEDPQLRPAEKKLI-VSSCASKEPVKTIP-----WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 154 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~ 154 (309)
+|++++ .++.++... .+++..+++.++.+ ++.++|||.+|......++.+...+++.+|+|.|+++..|+|+.
T Consensus 209 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 287 (438)
T TIGR00712 209 TPQSCG-LPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALD 287 (438)
T ss_pred CHHhcC-CCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChh
Confidence 443221 111110000 00000000000111 23468899999887777777777889999999999998999999
Q ss_pred chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhh
Q 021674 155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFS 233 (309)
Q Consensus 155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 233 (309)
+++++..+..+...++++++|+++||++++++.... ... .................+...... .+..+.+....
T Consensus 288 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 362 (438)
T TIGR00712 288 KSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATG---VFF-MTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGP- 362 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHH---HHH-HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccH-
Confidence 999999989999999999999999999754322110 000 100011111111111122222211 11122211100
Q ss_pred hcchhh-hhhccCCCchHHHHHHHhHhHhhhh-hHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674 234 QSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAG-VFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 306 (309)
Q Consensus 234 ~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg-~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (309)
...... ..+..+++.++++.|+.|..+++++ +++|.+.|.+.|+.+|+..+.+..++.+++.+...+..+.||
T Consensus 363 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 363 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 010111 1233455789999999999999876 589999999999988999998877777767666555554443
No 14
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=8.3e-25 Score=206.62 Aligned_cols=284 Identities=15% Similarity=0.152 Sum_probs=171.1
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT 72 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~ 72 (309)
||+|.|+++|++.++++||+|+|+||++.++...+..+|.++|+.+..++. +++|||+.|++.++++++. .
T Consensus 128 ~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~ 206 (490)
T PRK10642 128 QGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-L 206 (490)
T ss_pred HHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-H
Confidence 699999999999999999999999999999999998899988887665443 3689999999866555432 2
Q ss_pred HHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcc-hHHHH-HHHHHHHHHHHHHHHHHhHHHHHHHHhC
Q 021674 73 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWA-LIVSHFCHNWGTFILLTWMPTYYNQVLH 150 (309)
Q Consensus 73 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~~~~~~~~~~~~~~~wlp~~l~~~~g 150 (309)
+..+..+|+|+.. +..++....+....++.++.++++++|+ ++.+. .....++.+..+|++.+|+|+|+++.+|
T Consensus 207 ~~~~~~~esp~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 282 (490)
T PRK10642 207 YLRHALEETPAFQ----QHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLH 282 (490)
T ss_pred HHHHcCCCChhHH----HHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2223345544311 0000000000000001123466777654 33332 2233345567788999999999998899
Q ss_pred CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH-hhHHHHHHHHHhhccCchHHHHH-HHHHHHh
Q 021674 151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI-GFLGPAFFLTQLSHVDSPAMAVL-CMACSQG 228 (309)
Q Consensus 151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 228 (309)
++..+.++......++..++.++.|+++||+|||+.. +... .+.............++...... ....+++
T Consensus 283 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 283 YSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV-------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI 355 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 9988888877777888999999999999999976311 1111 11111111111111222222211 1111111
Q ss_pred hhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHH
Q 021674 229 TDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 229 ~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 297 (309)
.+.. .+....... ..+++.|+++.++.+..+++++.++|.+.+++.+. ++|...+....++.+++.+.
T Consensus 356 ~~~~-~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 356 LNCF-TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred HHHH-HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 1111 111111122 34667899999986666888889999999999886 44554444444444444433
No 15
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.94 E-value=4.4e-25 Score=207.67 Aligned_cols=290 Identities=14% Similarity=0.097 Sum_probs=183.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh---------hcCCcchhHhhhhHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------RFGWPSVFYSFGSLGTVWF 71 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~---------~~gWr~~F~i~~~~~~v~~ 71 (309)
+|++++...+ ....++||+|+++||+++|+.++..++|..+++.+.+.+.. ..|||+.|++.+++.++..
T Consensus 134 ~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 134 IGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred HHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence 3667766544 55688999999999999999998888888887766655432 2589999999888887654
Q ss_pred HHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674 72 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 151 (309)
Q Consensus 72 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~ 151 (309)
+..+...+|.|+++ .++.++ +++.++++ ....+++.+++++.|...+.+++.....+.+.+|+|+|+++.+|+
T Consensus 213 l~~~~~~~~~p~~~--~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 285 (476)
T PLN00028 213 ILVLTLGQDLPDGN--YRELKK----SGTMPKDS-FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGL 285 (476)
T ss_pred HHHHHHcCcCCCCc--hhhHHh----cCcccccc-HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCC
Confidence 44443333433221 111111 00000100 011245667889988877776665556678889999999988999
Q ss_pred CccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhh
Q 021674 152 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTD 230 (309)
Q Consensus 152 s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 230 (309)
+..+++.+..+..++..++.+++|+++||+++|..... |+....................++....+. +...+++..
T Consensus 286 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~--r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~ 363 (476)
T PLN00028 286 SLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG--RLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQ 363 (476)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch--hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997632111 222221222112111122222223222221 111121111
Q ss_pred hhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 231 AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
...+..++...+..|+.+|++.|+.|..+++|++++|.+.+ .-+.++|..+|.+.+++.+++.+...+..
T Consensus 364 -~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 364 -AACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred -HhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 11122333334566788999999999988888888887765 22345798999888877777776665553
No 16
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=1e-24 Score=203.24 Aligned_cols=285 Identities=15% Similarity=0.188 Sum_probs=178.5
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh--------hcCCcchhHhhhhHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--------RFGWPSVFYSFGSLGTVWFT 72 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~--------~~gWr~~F~i~~~~~~v~~~ 72 (309)
||+++|+++|.+.++++|++|+|||++..+....+..+|.+++..+..++.+ ++|||+.|++.+++.++.
T Consensus 135 ~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-- 212 (438)
T PRK09952 135 QGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-- 212 (438)
T ss_pred HHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH--
Confidence 6999999999999999999999999999999999999999999888776653 589999999866655432
Q ss_pred HHHhh-cccCCCCCCCCCHHHHHHHHhccCCCCCCCCCCh-hHhhcchHHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHh
Q 021674 73 VWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW-GLILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVL 149 (309)
Q Consensus 73 ~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~~~~~~wlp~~l~~~~ 149 (309)
.+++. .+|+|+ .. +++ ++.+++ +++.++ +.++|+|+.|.... ..++.....|...+|+|.|+++++
T Consensus 213 ~~l~~~~~es~~----~~--~~~---~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 281 (438)
T PRK09952 213 LWVRNGMEESAE----FE--QQQ---HEQAAA--KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNL 281 (438)
T ss_pred HHHHHhCCCChh----HH--HHH---hhcccc--cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23322 233221 10 110 000000 112233 34677887776543 455566778899999999999999
Q ss_pred CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHH-HHHHhhccCchHHHHHHHHH-HH
Q 021674 150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAF-FLTQLSHVDSPAMAVLCMAC-SQ 227 (309)
Q Consensus 150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 227 (309)
|++..+........++...++.++.|+++||++||+.... ..+....... +.......+.....+..... +.
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYIT------GALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH------HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 9988765555556677788899999999999987632110 0010001111 11111111222222211111 11
Q ss_pred hhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHh-hhhhHHHhHHHhhccc--CCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674 228 GTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGV-LAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAVWNLFST 303 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~-lgg~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (309)
+.+ ...+..++...| .+++.|+++.++.+..++ +++.++|.+.+++.|. ++|...+...+++.+++.+......+
T Consensus 356 ~~~-~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 356 AHD-MVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHH-HHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 111 111222233334 345678888888665554 8999999999999885 35877777777777777666555554
Q ss_pred Cc
Q 021674 304 GE 305 (309)
Q Consensus 304 ~~ 305 (309)
+|
T Consensus 435 ~~ 436 (438)
T PRK09952 435 NQ 436 (438)
T ss_pred cc
Confidence 44
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=1.7e-24 Score=199.03 Aligned_cols=271 Identities=17% Similarity=0.183 Sum_probs=183.0
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-CCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
||+|+|...+....++.+|+| +||+++++++.++.++|..+++.+++++.++. +||+.|.+.++..++....++...+
T Consensus 107 ~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 185 (393)
T PRK09705 107 GGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSA 185 (393)
T ss_pred HHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 589999999999999999997 88999999999999999999999999999886 8999988766555443333322222
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 159 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~ 159 (309)
++|+++ + +++ .+.++.+|+|+.|.+....++.+..+++..+|+|+|+++ +|+|..+++..
T Consensus 186 ~~~~~~----~------------~~~---~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~ 245 (393)
T PRK09705 186 REVASS----H------------KTT---TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSL 245 (393)
T ss_pred CCCccc----c------------CCC---cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHH
Confidence 222111 0 000 011235678888887777777777888999999999987 79999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhh
Q 021674 160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
..+..+++.+++++.|++.||.++|+. ......+......... ....+..... ....+.+.+.........
T Consensus 246 ~~~~~i~~i~g~~~~g~l~~r~~~~~~-------~~~~~~l~~~~~~~~~-~~~~~~~~~~-~~l~g~g~g~~~~~~~~~ 316 (393)
T PRK09705 246 LALMTLGQAAGALLMPAMARHQDRRKL-------LMLALVLQLVGFCGFI-WLPLQLPVLW-AMVCGLGLGGAFPLCLLL 316 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccchHH-------HHHHHHHHHHHHHHHH-HccchHHHHH-HHHHHHhccchHHHHHHH
Confidence 999999999999999999999986531 1111111111111111 1111111111 112222222111111111
Q ss_pred hhhccC-CCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674 240 NHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 240 ~~~~~~-~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
..++.+ +++++...++.+..+++++.++|.+.|++.|+ ++|...|.+.+.+.++..+....+
T Consensus 317 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 317 ALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 223333 35789999999999999999999999999998 568888888776666555444444
No 18
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=3.2e-24 Score=197.71 Aligned_cols=282 Identities=16% Similarity=0.123 Sum_probs=186.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHH-HHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~-~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
+|+|.+...+.....+.+++|+|||++++|+.+++.++|. ++++++++++.+++||+..++.......+...+.....+
T Consensus 115 ~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 115 RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 4777777888888889999999999999999999999996 689999999999999776665433222221112222223
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 159 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~ 159 (309)
|+++.+ +.+++++ .++. +.++++++|||++|...+..++.....++..+|+|.|+++ +|+|..+.+.+
T Consensus 195 ~~~~~~-~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~ 262 (402)
T TIGR00897 195 DIFTPQ-HMQTREK--------FSEL--GKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQI 262 (402)
T ss_pred CCCCcc-cccCCcc--------hhhH--HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHH
Confidence 321110 0000000 0000 1134568899999988888888888889999999999865 89999999998
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh--ccCchHHH-HHHHHHHHhhhhhhhcc
Q 021674 160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS--HVDSPAMA-VLCMACSQGTDAFSQSG 236 (309)
Q Consensus 160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (309)
.....+++.++++..|+++||+++|+... .............+.... ..++.... +.....+.+.... ..
T Consensus 263 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~--~~ 335 (402)
T TIGR00897 263 WGTFFFTNIVFNVIFGIVGDKLGWMNTVR-----WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY--VP 335 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHH-----HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH--HH
Confidence 88889999999999999999998664211 000111111111111111 11222222 2222223222221 11
Q ss_pred hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 237 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 237 ~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
......+..|+++|.+.|+.|...++++.++|.+.|.+.|..++...+++.+++++++.+...+.
T Consensus 336 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 336 LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 22233456778899999999999999999999999999999888888888888887776655443
No 19
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=3.2e-25 Score=196.89 Aligned_cols=272 Identities=20% Similarity=0.287 Sum_probs=199.0
Q ss_pred ccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC---CcchhHhhhhHHHHHHHHHHhhcccCC
Q 021674 6 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WPSVFYSFGSLGTVWFTVWLSKAHSSP 82 (309)
Q Consensus 6 g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g---Wr~~F~i~~~~~~v~~~~~~~~~~~~p 82 (309)
|+.+..+...+++|||||++|.++|+.. ..|+|..+...+..+++...| ||.+-.+..+..++..++......|.|
T Consensus 119 GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p 197 (417)
T COG2223 119 GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVP 197 (417)
T ss_pred cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 5677888899999999999999999999 779999999999999999999 999998877666554444444455544
Q ss_pred CCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674 83 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL 162 (309)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~ 162 (309)
+.+++.++. .+.+++.++||+..|.+.+.|+...-++-++..|+|.|+++++|.++.++|.+...
T Consensus 198 ~~r~~~~~~---------------~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~ 262 (417)
T COG2223 198 EHRASVKPQ---------------LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFL 262 (417)
T ss_pred hhhcccccc---------------chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Confidence 322111110 01235678899999999999998877889999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc-----CchHHHHH-HHHHHHhhhhhhhcc
Q 021674 163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-----DSPAMAVL-CMACSQGTDAFSQSG 236 (309)
Q Consensus 163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~ 236 (309)
..+.+.+..+++|+++||+|.+|.... ..+.+..... ....... .+...... ++... .+....+..
T Consensus 263 f~~~g~l~Rp~GG~LsDR~Gg~rv~~~------~f~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~l~-~~~G~GnGs 334 (417)
T COG2223 263 FPLIGALARPLGGWLSDRIGGRRVTLA------VFVGMALAAA-LLSLFLTGFGHGGSFVVFVAVFLALF-VFAGLGNGS 334 (417)
T ss_pred HHHHHHHHHhccchhhhhccchhHHHH------HHHHHHHHHH-HHHccccccccCcchHHHHHHHHHHH-HHhccCcch
Confidence 999999999999999999997742211 1111111111 1111110 11222222 22221 122344556
Q ss_pred hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674 237 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 237 ~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
++...+...|++.|.+.|+...++.+||+.-|...|...|. ++++..|++...+++++.+.....
T Consensus 335 vfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 335 VFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred heeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666778999999999999999999999999999998 558999999888888887644444
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=2.7e-24 Score=203.40 Aligned_cols=264 Identities=16% Similarity=0.120 Sum_probs=180.6
Q ss_pred CCcccccchhhHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
||+|.++..|....++.+++ |+|||++++|++....++|..+||++++++.+++||||.|++..++.++...+..+..|
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 68899999999999888887 68999999999999999999999999999999999999999987777665444444445
Q ss_pred cCCCCC-CCCCHHHHHH---------------------------------------HHhccCCCCCCCCCChhHhhcchH
Q 021674 80 SSPAED-PQLRPAEKKL---------------------------------------IVSSCASKEPVKTIPWGLILSKPP 119 (309)
Q Consensus 80 ~~p~~~-~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~l~~~~~ 119 (309)
++|+++ ++.+..+... ...+...++| ..|+ +++|+|.
T Consensus 184 ~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p--~~~~-~lf~~~~ 260 (495)
T PRK14995 184 RQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRP--MIDM-RLFTHRI 260 (495)
T ss_pred CCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcCH-HHhCCcc
Confidence 544321 1122111000 0001111111 2233 5789998
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~ 199 (309)
++......++.....++...++|.|+|+.+|+|+.++|+++.+..++..+++++.|++.||+++|+.. ..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~---------~~g 331 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA---------TGG 331 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH---------HHH
Confidence 88777777777777888899999999999999999999999999999999999999999999865311 111
Q ss_pred hHHHH---HHHHHhhccCchHH-HHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 200 FLGPA---FFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 200 ~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
..... ..+......++... .......+++.+............+.++++++.+.++.|+.+++|+.+|+.+.|.+.
T Consensus 332 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 332 MALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 11111111122222 222222333333221111122234456678999999999999999999999999986
Q ss_pred c
Q 021674 276 Q 276 (309)
Q Consensus 276 ~ 276 (309)
+
T Consensus 412 ~ 412 (495)
T PRK14995 412 S 412 (495)
T ss_pred H
Confidence 5
No 21
>PRK03699 putative transporter; Provisional
Probab=99.93 E-value=5.3e-24 Score=195.72 Aligned_cols=269 Identities=14% Similarity=0.192 Sum_probs=178.8
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-hcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
+|++.|...+....++.|++|+|+|+++++..+...++|..+++++.+.+.+ .+|||+.|.+.+++.++..++.++ .
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~ 182 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--S 182 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--c
Confidence 4677888888999999999999999999999999999999999998888764 579999999888776654433332 1
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 159 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~ 159 (309)
+.|+.+++.+ + ++++. .++ ..+++++...+..++.....+++.+|+|.|+++.+|+|+.+++.+
T Consensus 183 ~~p~~~~~~~--~---------~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 246 (394)
T PRK03699 183 EFPALGKHAP--K---------ADKPV----AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNL 246 (394)
T ss_pred CCccccccCc--c---------ccCcc----ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHH
Confidence 2222111000 0 00000 011 124566766666677767788899999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchH-HHHHHHHHHHhhhhhhhcchh
Q 021674 160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLY 238 (309)
Q Consensus 160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (309)
.+...++..++.++.|+++||+++|+.. ..... ............++.. .....+..+++.+.. .+...
T Consensus 247 ~~~~~~~~~ig~~~~g~l~dr~~~~~~l--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~~ 316 (394)
T PRK03699 247 VSNFWMAYMVGMWIFSFIVRFFDLQRIL--------TVLAG-LALVLMYLFVNTDDPSHLLYAILGLGFFSSAI-YTTII 316 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhHH--------HHHHH-HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH-HHHHH
Confidence 9999999999999999999999876421 11111 1111111111222332 222222233222111 11122
Q ss_pred hhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHH
Q 021674 239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 239 ~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 297 (309)
+...+..|+.++...+..+..+++|+.++|.+.|++.|..++...+++.+++++++.+.
T Consensus 317 ~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 317 TLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 22233345555667788888999999999999999999878888888777777666443
No 22
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=1.3e-23 Score=191.09 Aligned_cols=271 Identities=15% Similarity=0.094 Sum_probs=180.7
Q ss_pred CcccccchhhHHHHHhccCCCcchhHH--HHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRS--LALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~--~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
|.+.+...|...++..|+.|+++|++. .+....+.++|.++|+++++++.+++|||+.|++.+++.++.....++..|
T Consensus 98 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 98 SSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred HhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 445667788888999999998888765 688888899999999999999999999999999987766554433333345
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 159 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~ 159 (309)
|+|+++++ ++ + ..+.++.+|+|+.+......++.........+++|.|+++++|.++.+.+.+
T Consensus 178 ~~~~~~~~---~~----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 240 (375)
T TIGR00899 178 SYPRGAPG---AL----------T----RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLM 240 (375)
T ss_pred CcccCccc---cc----------C----cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHH
Confidence 54432111 00 0 1123346677777765555555444455667889999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchh
Q 021674 160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLY 238 (309)
Q Consensus 160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 238 (309)
.........++.++.|++.||+++|+.. . ................++.+.... ....+.+.+.. .+...
T Consensus 241 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~ 310 (375)
T TIGR00899 241 MGTAAGLEIPFMLLAGYLIKRFGKRRLM--------L-LAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL-AGIGM 310 (375)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcchhHH--------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 8777677778889999999999876421 1 111111111111111122222211 11112222211 11122
Q ss_pred hhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674 239 SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 239 ~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
...+|..|++++.+.++.+...++|+.++|.+.|.+.|..+|+..|.+.+++.+++.+...
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 311 LYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 2334556777789999999999999999999999999988899999888877777765543
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=2.9e-23 Score=190.88 Aligned_cols=265 Identities=16% Similarity=0.193 Sum_probs=174.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.|...|...+++.|++|+|||++++++..++.++|..+++++++++.+++|||+.|++.+++.++......+..||
T Consensus 118 ~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~ 197 (394)
T PRK10213 118 LGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPS 197 (394)
T ss_pred HHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 47888899999999999999999999999999999999999999999999999999999998877666543333333343
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+|++++ ++ ..+.++++|+|++|......++.....++..+|+|+++.+++|+++.+.+...
T Consensus 198 ~~~~~~---------------~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~ 258 (394)
T PRK10213 198 LPGEPS---------------HQ----KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVL 258 (394)
T ss_pred CCcccc---------------cc----hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHH
Confidence 221110 00 11234678999988876666666667777888886666677899999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (309)
....++..+++.+.+++.||.+++ .............+......++++... .....+++.... ......
T Consensus 259 ~~~~~~~iig~~~~~~l~~r~~~~---------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~-~~~~~~ 328 (394)
T PRK10213 259 LSFGIASFVGTSLSSFILKRSVKL---------ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALV-PVGWST 328 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccchh---------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhh-hHHHHH
Confidence 888888899998888888884322 111111111111111111112222221 222222222211 111221
Q ss_pred hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHH
Q 021674 240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 294 (309)
Q Consensus 240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 294 (309)
..++..|++.+.+.+......++|..+||.+.|.+.|+.++...+...+.+.++.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 329 WITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 2222335555666666677788999999999999999877777776655444433
No 24
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.92 E-value=1.8e-23 Score=192.64 Aligned_cols=273 Identities=20% Similarity=0.228 Sum_probs=177.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...|...+++.|++|+|+|++++++.+.+.++|..+++.++..+.+..+||+.|++.+++.++.........+|
T Consensus 113 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 113 TGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred HHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 47888889999999999999999999999999999999999999999999899999999998776555443333333455
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcc---hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK---PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 157 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g 157 (309)
+|+.+++.+++ +++ +...+.++|+ +..+......++.....+...+|+|.|+++ +|++..+.+
T Consensus 193 ~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~ 258 (406)
T PRK11551 193 SRAFAQAAGAG-----------KQR--APVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAG 258 (406)
T ss_pred ChhHHhccCcc-----------hhh--hhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhh
Confidence 43221100000 000 0011222222 233334444455555677888999999986 699999999
Q ss_pred hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcc
Q 021674 158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSG 236 (309)
Q Consensus 158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 236 (309)
.......++..++.++.|+++||+++|+. +. ...+............++..... .....+++... ..+.
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~ 328 (406)
T PRK11551 259 LVQIAFNIGGALGSLLIGALMDRLRPRRV--------VL-LIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVG-GQSV 328 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHH--------HH-HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh-HHHH
Confidence 99999999999999999999999987631 11 11111111111111222332221 11222221111 1122
Q ss_pred hhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHH
Q 021674 237 LYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 237 ~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 297 (309)
.+... +..++++++.+.|+.+...++++.++|.+.|.+.|+ +++...+.....+.+++.+.
T Consensus 329 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 329 LYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence 22222 334667899999999999999999999999999998 45666666665555555433
No 25
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.92 E-value=1.5e-23 Score=191.93 Aligned_cols=267 Identities=16% Similarity=0.206 Sum_probs=176.7
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|+++|...|....++.|++|++||++++++...+..+|..+++++++++.+.+|||++|++.+++.++..+......||
T Consensus 101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 47888888898899999999999999999999999999999999999999999999999999887766544333333444
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
.++++ + .+. +.+ .+.+|+++.|......++.+.+.+...+++|+|+++.+|+|+.+.+++.
T Consensus 181 ~~~~~-~--~~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 241 (382)
T PRK10091 181 IRDEA-K--GGL---------------REQ-FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIM 241 (382)
T ss_pred CCccc-c--cCH---------------HHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 32111 0 000 001 2356788777766555555566667778889999988999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHH-HHHHHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (309)
.+..++..++.++.|+++||+++|+... ............... ..+.... .+.....+.+..... .....
T Consensus 242 ~~~~~~~~ig~~~~g~l~~r~~~~~~~~-------~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~-~~~~~ 312 (382)
T PRK10091 242 MLVGLGMVLGNLLSGRLSGRYSPLRIAA-------VTDFIIVLALLMLFF-FGGMKTASLIFAFICCAGLFALS-APLQI 312 (382)
T ss_pred HHHHHHHHHHhHHHheeccccCchhHHH-------HHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhhh-HHHHH
Confidence 9999999999999999999998663211 111111111111111 1122222 222222222221111 11111
Q ss_pred -hhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHH
Q 021674 240 -NHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 240 -~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 297 (309)
..++. +++..+.+. .+...++|+++||.+.|.+.|+ .+|+..+.+.+.+.++....
T Consensus 313 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 313 LLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 11222 334455443 4677899999999999999996 68998888876665555433
No 26
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=8.9e-24 Score=191.52 Aligned_cols=273 Identities=18% Similarity=0.151 Sum_probs=181.8
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|+++|...+.....+.+|+| |||+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.++.....+...++
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 101 ASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 478888888888999999998 6799999999999999999988888888888999999999888776654444333333
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+|+++++ +++ +.+.++.+.++.+|+|+.|......++..........+.|.|.+ ++|.+..+.+.+.
T Consensus 180 ~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (377)
T TIGR00890 180 PPGQLIK-TNI-----------EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQ-SLGLSDGFLVLAV 246 (377)
T ss_pred Cchhccc-cCc-----------ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCHHHHHHHH
Confidence 2221110 000 00001123467889998887776666665555666677888865 4789888899999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (309)
....++..++.++.|+++||++||+.... ....................... ......+.+.+.. ......
T Consensus 247 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~ 318 (377)
T TIGR00890 247 SISSIFNGGGRPFLGALSDKIGRQKTMSI-------VFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGT-ISLFPS 318 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhH-------HHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccc-hhccHH
Confidence 99999999999999999999987642211 11111111111111111111111 1111122211111 111111
Q ss_pred hhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674 240 NHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 240 ~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 295 (309)
... ..++++++.+.|+.+...++|+.++|.+.|.+.|+.+|+..|.+.+++.+++.
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 319 LVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 222 34567899999999999999999999999999999889999988777766554
No 27
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.92 E-value=1.8e-24 Score=196.28 Aligned_cols=278 Identities=17% Similarity=0.187 Sum_probs=181.5
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhh-hhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL-AFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~-~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
+|++.+...|...++++|++|+|||++++++.+.+.++|..+++ .++..+.++.+||+.|++.+.+.++..+......+
T Consensus 93 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 93 NGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred HHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeC
Confidence 47888999999999999999999999999999999999999999 47777778899999999888776654444444445
Q ss_pred cCCCCCCCCCHHHH-HHHHhc---cCCCC-CCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674 80 SSPAEDPQLRPAEK-KLIVSS---CASKE-PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 154 (309)
Q Consensus 80 ~~p~~~~~~~~~~~-~~~~~~---~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~ 154 (309)
|+|++++..++++. ....++ +.+++ ...+..+++++|+|.+|...+..++.....+.+.+|+|.|+++.+|++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 252 (379)
T TIGR00881 173 DSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE 252 (379)
T ss_pred CCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 44432211000000 000000 00000 01112245678999999888888887778888999999999999999999
Q ss_pred chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh
Q 021674 155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS 233 (309)
Q Consensus 155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (309)
+.+.......++..++.++.|+++||..+|++.... ....................+.... ......+......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 327 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLA----VFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGP- 327 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHH----HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhh-
Confidence 999999999999999999999999997554322110 0111111111111111111122222 1112222111111
Q ss_pred hcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHH
Q 021674 234 QSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV 283 (309)
Q Consensus 234 ~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~ 283 (309)
........ +..+++.++.+.++.|...++++.++|.+.|.+.|+.+|+..
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 328 QMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred hHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 11111122 234567899999999999999999999999999998777653
No 28
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=4.8e-23 Score=194.44 Aligned_cols=280 Identities=14% Similarity=0.168 Sum_probs=184.5
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-hcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
|++.+...+...+++.||+|+|||+++.++...+..+|.++++.++.++.+ .+|||..|++.+++.++..+..+ ..+|
T Consensus 118 ~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~-~~~e 196 (491)
T PRK11010 118 AFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL-LAPE 196 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 344556667788899999999999999999999999999999999999999 57999999998877665433322 2444
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++ +++. +++ ...++++++++++.|......++.....+...+|.|+|+.+++|+|..+.+.+.
T Consensus 197 ~~~~~~~---~~~~--------~~~-~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~ 264 (491)
T PRK11010 197 PTDTIPV---PKTL--------EQA-VVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVN 264 (491)
T ss_pred Ccccccc---ccch--------hhh-HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 3221100 0000 000 012456778888877766666666666777788999999888999999999987
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH-HhhHHHHHHHHHhhcc-CchHHHHHHHHHHHhhhhhhhcch
Q 021674 161 -VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS-IGFLGPAFFLTQLSHV-DSPAMAVLCMACSQGTDAFSQSGL 237 (309)
Q Consensus 161 -~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
....++..++.+++|+++||+++|+. .+.. +......+........ ++.........+......+.....
T Consensus 265 ~~~g~i~~iiG~ll~G~L~dr~g~~~~-------l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~ 337 (491)
T PRK11010 265 KTLGLLATIVGALYGGILMQRLSLFRA-------LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAF 337 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHH-------HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567999999999999999997631 1111 1101111111111111 222221111111000011111112
Q ss_pred hhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 238 YSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 238 ~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
++...+ .+++..++..++.|...++|+.+++.+.|.+.|..||...|.+.+++.+.+.+.....
T Consensus 338 ~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 338 VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 222223 3445788899999999999999999999999998889999988888888776665544
No 29
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=1.4e-22 Score=186.90 Aligned_cols=288 Identities=13% Similarity=0.045 Sum_probs=183.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...|....++.|++|+++|++..++......+|..+++.+++++.++.|||+.|++.+++.++.....+...||
T Consensus 111 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 111 QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46777888889999999999999999999999998899999999999999999999999998887776554433333444
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++ +.+.++ . ..++++++|||+++......++.....+...++.|.|+++++|+++.+.++..
T Consensus 191 ~~~~~~~-~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~ 257 (406)
T PRK15402 191 TAGRVGE-KLSLKE----------L--GRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQ 257 (406)
T ss_pred CCccccc-cccHHH----------H--HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHH
Confidence 3221110 000000 0 11346788999988877666666666667778899999999999999999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHh--hccCchHHHH-HHHHHHHhhhhhhhcch
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDSPAMAV-LCMACSQGTDAFSQSGL 237 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (309)
....++..++.++.|+++||+++|+... ................ ....+..+.. .....+.+.+.. .+..
T Consensus 258 ~~~~~~~~~g~~~~g~l~~r~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~-~~~~ 330 (406)
T PRK15402 258 VPVFGALIAGNLTLARLTSRRPLRSLIR------MGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA-NAGL 330 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHH------HHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH-hhhH
Confidence 7777888999999999999998763111 0001011111111111 1112222222 122222222211 1122
Q ss_pred hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcccc
Q 021674 238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV 308 (309)
Q Consensus 238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (309)
........++++|...++.+...+++..+|+.+.+.+.+..++.......+++.++..+....+.+++++.
T Consensus 331 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (406)
T PRK15402 331 YRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFLKDKPMG 401 (406)
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 22222334578999999999999999999999999998885544333333333333333334444444443
No 30
>PRK15075 citrate-proton symporter; Provisional
Probab=99.92 E-value=6.3e-23 Score=190.97 Aligned_cols=259 Identities=12% Similarity=0.137 Sum_probs=158.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT 72 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~ 72 (309)
||+++|...|+...+++||+|+|+|++++++...+.++|..+++.+++.+. +++|||+.|++..... +. .
T Consensus 127 ~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~-~ 204 (434)
T PRK15075 127 QGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PF-I 204 (434)
T ss_pred hhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HH-H
Confidence 689999999999999999999999999999999999998888888877763 5789999999743322 21 1
Q ss_pred HHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674 73 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWAL-IVSHFCHNWGTFILLTWMPTYYNQVLHF 151 (309)
Q Consensus 73 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~wlp~~l~~~~g~ 151 (309)
.+.+. .++|+++ .+++ + +++..+..++.+.|+++.+.. ....++.....+...+|+|.|+++++|+
T Consensus 205 ~~~~~---~~~e~~~---~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 271 (434)
T PRK15075 205 FLIRR---SLEETEE---FLAR---K----HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHL 271 (434)
T ss_pred HHHHH---hcCCCHH---HHHh---h----hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22221 1222110 0000 0 000001123444566655543 3333445566788899999999998999
Q ss_pred CccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhh
Q 021674 152 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTD 230 (309)
Q Consensus 152 s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 230 (309)
+..+.+++..+..++..++.+++|+++||++||+.... ...................++.... ......+.+.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 346 (434)
T PRK15075 272 SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIA-----FTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYG 346 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH-----HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 99999998888889999999999999999987632110 0001000000001111111222111 11111222221
Q ss_pred hhhhcchhhhhhc-cCCCchHHHHHHHhHhHhh-hhhHHHhHHHhhcccCCc
Q 021674 231 AFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSW 280 (309)
Q Consensus 231 ~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~l-gg~i~~~~~g~l~~~~~~ 280 (309)
.. .+.......| .+++.++++.++.+..++. ++.++|.+.|++.|+.++
T Consensus 347 ~~-~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 347 SY-NGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HH-HhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 11 1112222223 4567899999987665654 588999999999998554
No 31
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=7.5e-23 Score=188.03 Aligned_cols=267 Identities=15% Similarity=0.078 Sum_probs=171.6
Q ss_pred ccchhhHHHHHhccCCCcch--hHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674 6 GVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 83 (309)
Q Consensus 6 g~~~p~~~~~i~~~~p~~~r--g~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~ 83 (309)
+...|...+++.++.|+++| ++..++.+++.++|.++|+++++++.+++|||..|++.+++.++..+......||+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 120 STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 45677788888888887766 4667899999999999999999999999999999998887776654444444555443
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcc-hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674 84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL 162 (309)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~ 162 (309)
++++. ++ +.+ ...++ +..+......++.....+.+..|+|.|+++++|+++.+.+.+...
T Consensus 200 ~~~~~-~~----------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~ 260 (393)
T PRK15011 200 ELPLA-TG----------TLE--------APRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGT 260 (393)
T ss_pred CCccc-cc----------ccc--------ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 22110 00 000 01112 222333333344434455667899999999999999999988877
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HHhhhhhhhcchhhhh
Q 021674 163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSGLYSNH 241 (309)
Q Consensus 163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 241 (309)
..++..++.++.|+++||+++|+. +. ................+++...+..... +...+.. .+......
T Consensus 261 ~~~~~i~~~~~~G~l~dr~g~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~-~~~~~~~~ 330 (393)
T PRK15011 261 AAGLEIPTMLIAGYFAKRLGKRFL--------MR-VAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGIL-GGIGMLYF 330 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHH--------HH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 777888899999999999987631 11 1111111111111122233322222111 1111111 11112223
Q ss_pred hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 242 QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 242 ~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+|..|++++.+.++.+...++|+.++|.+.|.+.|+.+|+..|.+.+++.+++.+...+.
T Consensus 331 ~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 331 QDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 455677799999999999999999999999999998789988887777776666554443
No 32
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.92 E-value=1.9e-22 Score=183.93 Aligned_cols=261 Identities=15% Similarity=0.187 Sum_probs=173.7
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...+...+++.|++|++||+++.++.+...++|..+++.+++.+.+++|||+.|++.+++.++.........+|
T Consensus 103 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 103 QAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred HHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 47888999999999999999999999999999999999999999999999999999999998777666544333333444
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++.+.++ ...++++++|||+++...+...+.....+...++.|.++++++|+++.+.+.+.
T Consensus 183 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 248 (385)
T TIGR00710 183 TLPYEARIQIST--------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLF 248 (385)
T ss_pred CCCCcccCCHHH--------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHH
Confidence 332211100000 011245678899888877766666667788889999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC-chHHHHH--HHHHHHhhhhhhhcch
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD-SPAMAVL--CMACSQGTDAFSQSGL 237 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~ 237 (309)
....++..++.++.|+++||+++|+.... ................... ....... ....+.+.+.. ....
T Consensus 249 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 321 (385)
T TIGR00710 249 ALNIIAMIFGGFLNGRFIKKWGAKSLLRM------GLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMI-SSIA 321 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHH------HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH-HHHH
Confidence 98999999999999999999987632111 1111111111111111111 1111111 11122222211 1112
Q ss_pred hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674 238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 282 (309)
Q Consensus 238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~ 282 (309)
.....|..|+.++.+.++.|...+.++.+.+.+.+.+.+...+..
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00710 322 MAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPM 366 (385)
T ss_pred HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHH
Confidence 222334456788999999999998877777777785544344443
No 33
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.2e-23 Score=195.73 Aligned_cols=182 Identities=22% Similarity=0.305 Sum_probs=151.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh------hhcCCcchhHhhhhHHHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI------HRFGWPSVFYSFGSLGTVWFTVW 74 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~------~~~gWr~~F~i~~~~~~v~~~~~ 74 (309)
.|+.|++.+|+...+++.||.++|||+.+|++++..++|+++|..+...+. ...||||.|++.|+++++..++.
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 388999999999999999999999999999999999999999999998863 35799999999999998877777
Q ss_pred HhhcccCCCCCCCCCHHHHHHHHh----ccCCC-CC-CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 021674 75 LSKAHSSPAEDPQLRPAEKKLIVS----SCASK-EP-VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 148 (309)
Q Consensus 75 ~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~-~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~ 148 (309)
+...|+.|.+..-.+++|+....+ +..+. ++ .+...+++.+|+|.+|...+..++.....|++.+|+|.|+.+.
T Consensus 224 f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~ 303 (495)
T KOG2533|consen 224 FFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSN 303 (495)
T ss_pred EEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcC
Confidence 777888887654455555432211 11111 11 2234467789999999999999999999999999999999997
Q ss_pred hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674 149 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 182 (309)
Q Consensus 149 ~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~ 182 (309)
.|+|..++..+..+..+++.++.+++|+++||..
T Consensus 304 ~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 304 GGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred CCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999999963
No 34
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.91 E-value=5.7e-23 Score=189.76 Aligned_cols=274 Identities=14% Similarity=0.095 Sum_probs=170.4
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh-----hhc-------------CCcchhHhh
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-----HRF-------------GWPSVFYSF 63 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~-----~~~-------------gWr~~F~i~ 63 (309)
|++ |+.++...+.+++|||+||||+++|+.....++|..++..+...++ +.+ +||.++++.
T Consensus 139 Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~ 217 (462)
T PRK15034 139 GFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIW 217 (462)
T ss_pred HHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHH
Confidence 666 7788999999999999999999999997777777776665554433 333 366666666
Q ss_pred hhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHH
Q 021674 64 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 143 (309)
Q Consensus 64 ~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~ 143 (309)
.++.++..++.+...+|.|+++ .+ ..++++.+|+|..|...+.+++.+-++.++..|+|.
T Consensus 218 ~~~~iv~~i~~~~~~~~~~~~~--~~------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~ 277 (462)
T PRK15034 218 VPLLAIATIAAWSGMNDIASSR--AS------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAM 277 (462)
T ss_pred HHHHHHHHHHHHHhCCCccccc--cC------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655554333333322221110 00 112456899999999999999887777788889999
Q ss_pred HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH-HHHhhccC-chHH-HH
Q 021674 144 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF-LTQLSHVD-SPAM-AV 220 (309)
Q Consensus 144 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~ 220 (309)
|+++.+ +.........+..+...+..+++|+++||+|+|+.... ..+.+...... ........ .... ..
T Consensus 278 ~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~------~~i~~~i~~~~~~l~lp~~~~~~~~~~~ 349 (462)
T PRK15034 278 LAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI------NFIFMAIFSALLFLTLPGTGSGNFIAFY 349 (462)
T ss_pred HHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH------HHHHHHHHHHHHHHHhccccccHHHHHH
Confidence 998754 33333333344557788899999999999997642111 11111111111 11111111 1111 11
Q ss_pred -HHHHHHHhhhhhhhcchhhhhhccCC----------------------CchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 221 -LCMACSQGTDAFSQSGLYSNHQDIAP----------------------RYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
.++..... ....+..++....+.-| ++.|.++|+.+.++.+||++-|.+.|...+.
T Consensus 350 ~~~~~l~~~-~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~ 428 (462)
T PRK15034 350 AVFMGLFLT-AGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNM 428 (462)
T ss_pred HHHHHHHHH-hcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHH
Confidence 11111111 11223333322111111 2689999999999999999999999999887
Q ss_pred -CCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674 278 -GSWDDVFKVSVGLYLVGTAVWNLFSTGE 305 (309)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (309)
+++...|+...+.+++|.++-.....|+
T Consensus 429 ~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 429 TGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7799999999889888865544444444
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=5.3e-23 Score=193.67 Aligned_cols=265 Identities=18% Similarity=0.220 Sum_probs=180.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
||++.+...|...+++.|++|+++|+++++++..+..+|..+|+.+++++.+++|||+.|++.++++++.........++
T Consensus 100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCC
Confidence 58889999999999999999999999999999999999999999999999999999999999877776554333333343
Q ss_pred CCCCC-CCCCHHHH--------------------------HH--------------HHhccCCCCCCCCCChhHhhcchH
Q 021674 81 SPAED-PQLRPAEK--------------------------KL--------------IVSSCASKEPVKTIPWGLILSKPP 119 (309)
Q Consensus 81 ~p~~~-~~~~~~~~--------------------------~~--------------~~~~~~~~~~~~~~~~~~l~~~~~ 119 (309)
+++++ ++.+.... .. ..++..++++ ..+ .+++|+|+
T Consensus 180 ~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~ 256 (485)
T TIGR00711 180 DKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNP--LVD-LRLFKYRN 256 (485)
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCC--ccC-HHHHcCCC
Confidence 32211 11111000 00 0000011111 122 35788998
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~ 199 (309)
++......++.....++..+++|.|+++.+|+++.++++...+..++..++.++.|++.||+++|+. + ..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~--------~-~~g 327 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL--------V-TIG 327 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH--------H-HHH
Confidence 8887777788888888999999999999999999999999999999999999999999999987631 1 111
Q ss_pred hHHHHHHHHHhh---ccCchHH-H-HHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674 200 FLGPAFFLTQLS---HVDSPAM-A-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 274 (309)
Q Consensus 200 ~~~~~~~~~~~~---~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l 274 (309)
............ ..+.+.. . ......+++.+....+.......+.++++++.+.++.|+.+++|+.+|+.+.|.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 328 LILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211111111111 1122222 1 1222223332222111111223445668899999999999999999999999999
Q ss_pred ccc
Q 021674 275 LQH 277 (309)
Q Consensus 275 ~~~ 277 (309)
.++
T Consensus 408 ~~~ 410 (485)
T TIGR00711 408 LTN 410 (485)
T ss_pred HHH
Confidence 875
No 36
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=4.5e-23 Score=193.02 Aligned_cols=286 Identities=13% Similarity=0.157 Sum_probs=181.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.|...+...+++.+|+| +||+++.|+.+.+.++|..+++++++++.+.+|||+.|++.+++.++..+.++...++
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~ 196 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV 196 (455)
T ss_pred HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 477888777788889999996 7899999999999999999999999999999999999999888766543322222221
Q ss_pred CCCCCCCCCHHHHHH----HHhc----cCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCC
Q 021674 81 SPAEDPQLRPAEKKL----IVSS----CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 152 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s 152 (309)
.+++++...++++.. ..++ ...++..+..++ +++|+|+++......++...+.+...+|+|.|+++ +|++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s 274 (455)
T TIGR00892 197 GPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVD 274 (455)
T ss_pred CcccccccccccccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCC
Confidence 111000000000000 0000 000000011122 47899999887777777777788889999999976 7999
Q ss_pred ccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhh
Q 021674 153 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDA 231 (309)
Q Consensus 153 ~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 231 (309)
..+++++.++.+++..++.+++|+++||...|+. ++......++...+........++.+.. +..+..+++.+.
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~ 349 (455)
T TIGR00892 275 EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS 349 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch
Confidence 9999999999999999999999999997422110 1111111111111111111122233322 222223332221
Q ss_pred hhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHH
Q 021674 232 FSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 232 ~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 295 (309)
. ....++.. +..++++++.+.++.+...++|++++|.+.|.+.|. ++|+..|.+.+++.+++.
T Consensus 350 ~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 350 V-GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred H-HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 1 11222222 234567889999999999999999999999999997 468888877666555443
No 37
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=3.6e-22 Score=187.62 Aligned_cols=269 Identities=12% Similarity=0.098 Sum_probs=176.5
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
||++.|...|....++.|++|+++|+++.++.....++|..+|+++++.+.++.|||+.|++..++..+.........++
T Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 108 QGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 58899999999999999999999999999999999999999999999999999999999998776655443333333333
Q ss_pred CCCCCCCCCHHHHHH---------------------------------------HHhccCCCCCCCCCChhHhhcchHHH
Q 021674 81 SPAEDPQLRPAEKKL---------------------------------------IVSSCASKEPVKTIPWGLILSKPPVW 121 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~ 121 (309)
+++++++.+...... ..++...+ .+..+. +++|||+++
T Consensus 188 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~l~~~~~~~ 264 (471)
T PRK10504 188 YTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN--RALFSL-KLFRTRTFS 264 (471)
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCH-HHhcccchH
Confidence 322222222110000 00011111 123344 478999988
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH
Q 021674 122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 201 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~ 201 (309)
......++...+......+.|.|++..+|.++.+++++..+..++..++.++.|+++||+++|+.. .......
T Consensus 265 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~-------~~~~~~~ 337 (471)
T PRK10504 265 LGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL-------VATTLGL 337 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-------HHHHHHH
Confidence 877777777667666778899999988999999999999888888888889999999999876321 1111111
Q ss_pred HHH-HHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674 202 GPA-FFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 278 (309)
Q Consensus 202 ~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~ 278 (309)
... .........++.... ......+.+.+.. .+.... ...+.+++.++.+.++.|+..++|..+|+.+.|.+++..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 338 ALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTR-FSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHhccccccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 111111111222111 1122222221111 111111 123456678999999999999999999999999998864
Q ss_pred Cc
Q 021674 279 SW 280 (309)
Q Consensus 279 ~~ 280 (309)
++
T Consensus 417 g~ 418 (471)
T PRK10504 417 GQ 418 (471)
T ss_pred hh
Confidence 33
No 38
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=1.4e-22 Score=183.11 Aligned_cols=257 Identities=14% Similarity=0.115 Sum_probs=172.7
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHh-hcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS-KAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~-~~~ 79 (309)
+|++.+...|+..+++.|++|++||++++++.+.+.++|.++++++++++.+++|||+.|++.++..++....... +.+
T Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (365)
T TIGR00900 102 LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIP 181 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4678888899999999999999999999999999999999999999999999999999999866655443222222 222
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHhCCCccchhh
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLTESGL 158 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~l~~~~g~s~~~~g~ 158 (309)
|++++++ ++.+++..+ +. ..++++++|||.++......++.....+... .+.|.|+++.+|.+..+.+.
T Consensus 182 ~~~~~~~--~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (365)
T TIGR00900 182 ELAASEI--QALSNAVLR------DT--REGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGW 251 (365)
T ss_pred cCCCccc--cccchhHHH------HH--HhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHH
Confidence 2211111 110000000 00 1135667899998887777776666666666 89999999889999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC-chHHH-HHHHHHHHhhhhhhhcc
Q 021674 159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD-SPAMA-VLCMACSQGTDAFSQSG 236 (309)
Q Consensus 159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 236 (309)
+.....++..++.++.+++.||.++|+. +. .+.....+........+ +.... +.....+++.+.. .+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~ 321 (365)
T TIGR00900 252 VLAAFGLGALLGALLLGLLGRYFKRMAL--------MT-GAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPI-NVP 321 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhHH--------HH-HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999876521 11 11111111111111111 12221 2222222222211 122
Q ss_pred hhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 237 LYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 237 ~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
...... ..++++++.+.++.|...++++.++|.+.|.+.|+
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222223 34567899999999999999999999999999886
No 39
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.91 E-value=5e-22 Score=181.08 Aligned_cols=173 Identities=13% Similarity=0.173 Sum_probs=134.8
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...+...+++.|++|+|+|++++++.+....+|..+++.+++.+.+++|||+.|++.+.+.++..+......+|
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36777888889999999999999999999999999999999999999999999999999998777766544333333444
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++.+.+.+ + ...++++++|+|+.+......++...+.+.+.++.|.++.+.+|+++.+.+.+.
T Consensus 169 ~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~ 236 (377)
T PRK11102 169 TLPKERRQPFHLR----------T--TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYF 236 (377)
T ss_pred cCcccccCCCChH----------H--HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHH
Confidence 3222110000000 0 011345678898888766666666677788889999999998999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~ 185 (309)
.+..++..++.++.|++.||+++|+
T Consensus 237 ~~~~~~~~~~~~~~g~l~~r~g~~~ 261 (377)
T PRK11102 237 ALNIVFLFVMTIINSRFVRRVGALN 261 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 9999999999999999999998764
No 40
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.90 E-value=2e-22 Score=183.73 Aligned_cols=270 Identities=16% Similarity=0.153 Sum_probs=172.5
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT 72 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~ 72 (309)
||++.+...+....+++|++|+|||+++.++...+..+|.++++.++..+. +.++||+.|++.+++.++..
T Consensus 106 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~- 184 (394)
T TIGR00883 106 QGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL- 184 (394)
T ss_pred HHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH-
Confidence 588999999999999999999999999999999999999999998876654 46799999998665554432
Q ss_pred HHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchH--HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhC
Q 021674 73 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP--VWALIVSHFCHNWGTFILLTWMPTYYNQVLH 150 (309)
Q Consensus 73 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g 150 (309)
......+|+|++ ++++ + + +++ ++.++++.+|+++ ++......++.....+...+|+|.|+++++|
T Consensus 185 ~~~~~~~~~~~~-----~~~~----~-~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 251 (394)
T TIGR00883 185 YLRRNLEETPVF-----EKAQ----E-K-HKK--KRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLG 251 (394)
T ss_pred HHHHhcCCChhH-----HHHH----h-c-ccc--ccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 222223332211 0000 0 0 111 1234566777765 6666666666667778888999999999899
Q ss_pred CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH-HHHHHhhccCchHHHHHH-HHHHHh
Q 021674 151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA-FFLTQLSHVDSPAMAVLC-MACSQG 228 (309)
Q Consensus 151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~ 228 (309)
.+..+.+.......++..++.++.|+++||+++|+... .......... .........++....... ...+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 325 (394)
T TIGR00883 252 LSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLI------IFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALI 325 (394)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH------HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 99999999988889999999999999999998763111 0111111111 111111111222222211 112222
Q ss_pred hhhhhhcchhhhhhc-cCCCchHHHHHHH-hHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHH
Q 021674 229 TDAFSQSGLYSNHQD-IAPRYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLY 291 (309)
Q Consensus 229 ~~~~~~~~~~~~~~~-~~~~~~g~a~~~~-~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~ 291 (309)
.+.. .+...+...| .+++.++.+.++. +....+|+.++|.+.|.+.|+.+ |...++....+.
T Consensus 326 ~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 326 GGMY-TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHH-hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 1111 1222333333 3456788887774 44456788899999999999855 766655544443
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.90 E-value=3.9e-22 Score=184.61 Aligned_cols=274 Identities=16% Similarity=0.088 Sum_probs=176.4
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|++.+...|+..+++.|++|+++|+++.++...+.++|..+|+.+++.+.+..|||+.|++.++..++..+. ....+++
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 199 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPAL 199 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 556666778888999999999999999999999999999999999999999999999999866555443322 2333433
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
++++.+. +++. ++. ..+++.++|+|.++...+..++.. ...+..+|+|.|+++.+|+++.+.+++..
T Consensus 200 ~~~~~~~-~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~ 266 (417)
T PRK10489 200 PPPPQPR-EHPL---------RSL--LAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYA 266 (417)
T ss_pred CCCCccc-ccch---------HHH--HHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHH
Confidence 2211000 0000 000 112455778888766555444432 34567889999999889999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhhh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSN 240 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (309)
...++..++.++.+++.||.++++ .+. .+.....+........++..... .....+.+.+ .........
T Consensus 267 ~~~~g~~ig~~~~~~l~~~~~~~~--------~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~ 336 (417)
T PRK10489 267 AVPLGAALGALTSGWLAHSARPGL--------LML-LSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSA-ISSLLQYTL 336 (417)
T ss_pred HHHHHHHHHHHHHHHhhhccCcch--------HHH-HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 889999999999999999843221 111 11111111111122222222222 2222222221 111112233
Q ss_pred hhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHH-HHHHHH
Q 021674 241 HQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV-GTAVWN 299 (309)
Q Consensus 241 ~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~ 299 (309)
.++. +++.+|.+.++.+...++|+.++|.+.|.+.|..++...+...+++.++ +.+.+.
T Consensus 337 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 337 LQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 3444 4467999999999999999999999999999987776666655555444 444433
No 42
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.90 E-value=3.7e-22 Score=185.07 Aligned_cols=266 Identities=15% Similarity=0.132 Sum_probs=165.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhh-cc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK-AH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~-~~ 79 (309)
+|+|.|...+....++.|++|+|+|+++.++...+.++|.++++.+.+.+.+++|||+.|++... ..+. .++++. .|
T Consensus 116 ~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~-~~~~-~~~~~~~~p 193 (426)
T PRK12307 116 VGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL-PVLL-VIYIRARAP 193 (426)
T ss_pred HHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH-HHHH-HHHHHHHCC
Confidence 47888999999999999999999999999999999999999999999999999999999997433 2222 122222 12
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCC--CCCCCChhHhhcchHHHHHHHH---HHHHHHHHHHHHHhHHHHHHHHhCCCcc
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKE--PVKTIPWGLILSKPPVWALIVS---HFCHNWGTFILLTWMPTYYNQVLHFNLT 154 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~wlp~~l~~~~g~s~~ 154 (309)
|+++. ++++...+++.+++ ...+.++++++|+|.++..... .++.....+.+..|+|.|+++ +|+++.
T Consensus 194 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 266 (426)
T PRK12307 194 ESKEW------EEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTG 266 (426)
T ss_pred CChHH------HHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHH
Confidence 21110 00000000000000 0011245678888877654322 222223345678899999986 599999
Q ss_pred chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhh
Q 021674 155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 234 (309)
Q Consensus 155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
+.+.......++..++.++.|+++||+++|+.. ...................+.. ..+.....+.+......
T Consensus 267 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 338 (426)
T PRK12307 267 VVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF-------SIGLLMSFLFIFPLFRIPQDNY-LLLGACLFGLMATNVGV 338 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHHHHHHHHHHHHccccH-HHHHHHHHHHHHhcccH
Confidence 999988888999999999999999999876311 1111111111111111111222 21111111111110001
Q ss_pred cch-hhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHH
Q 021674 235 SGL-YSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV 283 (309)
Q Consensus 235 ~~~-~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~ 283 (309)
... .... +..+++.+|.+.|+.+...++++.++|.+.|++.|+.++...
T Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 339 GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred hHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 111 1122 334556799999999999999999999999999998766543
No 43
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.90 E-value=1.4e-21 Score=179.81 Aligned_cols=270 Identities=19% Similarity=0.152 Sum_probs=173.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|+|++...|...+++.|++|+|||++++++...+.++|.++|+++++++.+++|||+.|++..++.++.. +..+..
T Consensus 122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~-- 198 (399)
T PRK05122 122 LGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL-LLARPR-- 198 (399)
T ss_pred HHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-HHHhcC--
Confidence 58899999999999999999999999999999999999999999999999999999999987666554432 222211
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
|+++++ ++ + +.++++.+|+ .|.......+.........+|+|.|+++ +|+ .+.+...
T Consensus 199 -~~~~~~-~~-~---------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~ 255 (399)
T PRK05122 199 -PAVPPV-KG-E---------------RLPFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALAL 255 (399)
T ss_pred -CCCCCC-Cc-c---------------chhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHH
Confidence 211110 00 0 0122333332 2322222333445566777899999875 466 3456666
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (309)
....++..++.++.|++.||+++|+. +. ................++....+ .....+++.+.. .+....
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~-~~~~~~ 325 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRV--------AI-VSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLV-FPALGV 325 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHH--------HH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHH-HHHHHH
Confidence 67778888999999999999986531 11 11111111111111222332222 222223222211 111111
Q ss_pred -hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674 240 -NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 306 (309)
Q Consensus 240 -~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (309)
..+..+++++|.+.++.+...++|+.++|.+.|.+.|+.+|+..+.+.+++.+++.+....+.+|++
T Consensus 326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 326 EAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 1234566789999999999999999999999999999888999998887777777655555544433
No 44
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=1.8e-23 Score=188.04 Aligned_cols=254 Identities=26% Similarity=0.470 Sum_probs=167.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...|...+++.|++|+|||++++++.....++|.++++.+++.+.+++|||+.|++.+++.++..++.....++
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence 47788899999999999999999999999999999999999999999999999999999999888877664432233333
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCC-hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCC-ccchhh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIP-WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN-LTESGL 158 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s-~~~~g~ 158 (309)
+|+++++.++++++ ++++.+..+ ++.++++|.+|......++.....+...+|+|.|+++.+|++ ..+.+.
T Consensus 175 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (352)
T PF07690_consen 175 PPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGL 247 (352)
T ss_dssp -STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHH
T ss_pred cccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHH
Confidence 33222111111110 000001122 567788887775555555555677789999999999999999 789999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcch
Q 021674 159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGL 237 (309)
Q Consensus 159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (309)
+..+..+...++.++.|+++||+++|+ +..............+......++..+.. .....+.+.+ ...+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 320 (352)
T PF07690_consen 248 LFSIFGIVGIIGSLLAGRLSDRFGRRR------RLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFG-IVFPIL 320 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHH-HHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcHH------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHHHH
Confidence 899999999999999999999987542 11111111111111111111122222222 2222333222 112223
Q ss_pred hhhhhc-cCCCchHHHHHHHhHhHhhhhhHHH
Q 021674 238 YSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGT 268 (309)
Q Consensus 238 ~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~ 268 (309)
.....+ .+++++|.+.++.+...++++.++|
T Consensus 321 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 321 FSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 333333 4557899999999999999999987
No 45
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=8.4e-22 Score=181.12 Aligned_cols=287 Identities=12% Similarity=0.012 Sum_probs=182.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
||+++|...|+..+++.|++|+|||++++|+.+...++|.++|+.+++++.++. |+..|.+.+...++. .+.....||
T Consensus 98 ~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~ 175 (393)
T PRK11195 98 VGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPR 175 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 689999999999999999999999999999999999999999999999998864 888887765443322 222233444
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+|+++++.+++++...++ . ...++.++|+|.++.......+...........+|.|+++.+|+|+.+.|++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~-~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~ 247 (393)
T PRK11195 176 LGARRPGQSWNPIALLRD-F-------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQ 247 (393)
T ss_pred CcccccccCCCHHHHHHH-H-------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHH
Confidence 433221111111110000 0 01134677888766554444444444556667788899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (309)
....+++.++++..+++.||.++|+. .. .++... .........++++.... ....+.+.+.. .....+
T Consensus 248 ~~~~~g~i~g~~~~~~l~~~~~~~~~-------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~-~~~~~~ 316 (393)
T PRK11195 248 AVVAIGIAVGAGAAARLVTLETVLRV-------LP--AGILMG-LVVLLMALQHSLLPAYPLLILIGALGGFF-VVPMNA 316 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccch-------HH--HHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhh-hhhHHH
Confidence 99999999999999999888665421 11 111111 11111111222332222 22233322222 222333
Q ss_pred hhhccCCC-c-hHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh---cCCccccC
Q 021674 240 NHQDIAPR-Y-SGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF---STGEKVVD 309 (309)
Q Consensus 240 ~~~~~~~~-~-~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 309 (309)
..++.+|+ . +|.+.++.|+.++++..++..+.+.+ +..+.+..+.+....++++....+.| .+.++.+|
T Consensus 317 ~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK11195 317 LLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWRWHRRNQRQFD 390 (393)
T ss_pred HHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 33444554 3 69999999999999999999998865 56667777777666666666665555 34444444
No 46
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.89 E-value=7.6e-22 Score=184.29 Aligned_cols=292 Identities=15% Similarity=0.116 Sum_probs=174.2
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhH---HHHhhhcCCcchhHhhhhHHHHHHHHHHhh
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS---PFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 77 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~---~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~ 77 (309)
+|+|.|...+....+++|++|+++|++++++.+.+.++|..+++.++ ....+..|||+.|++.++..++. .+....
T Consensus 137 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~ 215 (481)
T TIGR00879 137 LGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFF 215 (481)
T ss_pred HHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhc
Confidence 58899999999999999999999999999999999999999999999 77777889999999855544443 233334
Q ss_pred cccCCCCC--CCCCHHHHHHHHhccCCCCC--------------------CCCCChhHhhcc------hHHHHHHHHHHH
Q 021674 78 AHSSPAED--PQLRPAEKKLIVSSCASKEP--------------------VKTIPWGLILSK------PPVWALIVSHFC 129 (309)
Q Consensus 78 ~~~~p~~~--~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~~------~~~~~~~~~~~~ 129 (309)
.+|+|+.. ++..+++++...+....+++ ..+..++++++. +.++......+.
T Consensus 216 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (481)
T TIGR00879 216 LPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQ 295 (481)
T ss_pred CCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 55554310 00001100000000000000 000112233321 222222222232
Q ss_pred HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH
Q 021674 130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ 209 (309)
Q Consensus 130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (309)
.........+|.|.+++ ++|++..+.+....+..++..++.+++|+++||+++|+.... .............
T Consensus 296 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-------~~~~~~~~~~~~~ 367 (481)
T TIGR00879 296 QFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLI-------GAAGMAICLFVLG 367 (481)
T ss_pred HHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH-------HHHHHHHHHHHHH
Confidence 22233445667776665 579999888888888899999999999999999987642111 1111111111111
Q ss_pred ---hhccCc-----hHHHH-HHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674 210 ---LSHVDS-----PAMAV-LCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 279 (309)
Q Consensus 210 ---~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~ 279 (309)
....+. ....+ .......+......+.......|. +++.++.+.++.+...+++++++|.+.+.+.++.+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~ 447 (481)
T TIGR00879 368 ILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG 447 (481)
T ss_pred HHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 111111 11111 111111111111111122222344 44679999999999999999999999999999878
Q ss_pred chHHHHHHHHHHHHHHHHHHhh
Q 021674 280 WDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
|...|++.+++.+++++...++
T Consensus 448 ~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 448 VGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred ccceehhHHHHHHHHHHHHhee
Confidence 8888888777777766665544
No 47
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.89 E-value=6.9e-22 Score=181.24 Aligned_cols=275 Identities=14% Similarity=0.110 Sum_probs=166.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC--CcchhHhhhhHHHHHHHHHHhhc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLSKA 78 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g--Wr~~F~i~~~~~~v~~~~~~~~~ 78 (309)
+|++.+...|...+++.|++|++||+++.++.+++.++|.++++.+++.+.++.+ ||+.|++.++..++. .......
T Consensus 110 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~ 188 (405)
T TIGR00891 110 IGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNI 188 (405)
T ss_pred HHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhC
Confidence 4788999999999999999999999999999999999999999999999998876 999999755444433 2333334
Q ss_pred ccCCCCCCCCCHHH--HHHHHhccCCCCCCCCCChh----Hhh-cchH----HHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 021674 79 HSSPAEDPQLRPAE--KKLIVSSCASKEPVKTIPWG----LIL-SKPP----VWALIVSHFCHNWGTFILLTWMPTYYNQ 147 (309)
Q Consensus 79 ~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~l~-~~~~----~~~~~~~~~~~~~~~~~~~~wlp~~l~~ 147 (309)
||+++.+++.++++ ++...+ ..++++..+.+.+ ... +.++ +........+.+...+...+|+|.|+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (405)
T TIGR00891 189 PEAEDWKEKHAGKALVRTMVDI-LYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKA 267 (405)
T ss_pred CCChhHHHHhhhhhhhhhHHHH-HhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 44332111000000 000000 0000000000000 001 1111 1222333333344556777899999999
Q ss_pred HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHH
Q 021674 148 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACS 226 (309)
Q Consensus 148 ~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 226 (309)
++|++..+.+.+.....++..+++++.|+++||+++|+.... ................++....... ...+
T Consensus 268 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (405)
T TIGR00891 268 DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVC--------SLLAGQLLIIPVFAIGANVAVLGLGLFFQQ 339 (405)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHH--------HHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 999999999999999999999999999999999987642111 1111101111111112222221111 1111
Q ss_pred Hhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHH
Q 021674 227 QGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKV 286 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~ 286 (309)
...... .+....... ..++++++.+.|+.+...++++.++|.+.|++.|+.+ |+..+..
T Consensus 340 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 340 MLVQGI-WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHccc-hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 111111 111112222 3456789999999999999999999999999999855 7765554
No 48
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.89 E-value=2.6e-21 Score=183.34 Aligned_cols=296 Identities=14% Similarity=0.120 Sum_probs=171.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-----------------------hcCCc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-----------------------RFGWP 57 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-----------------------~~gWr 57 (309)
+|++.|+..|....+++|++|+|+|++++++......+|..+++.++.++.+ .++||
T Consensus 125 ~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR 204 (502)
T TIGR00887 125 LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR 204 (502)
T ss_pred HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence 4889999999999999999999999999999999999999999988876543 24899
Q ss_pred chhHhhhhHHHHHHHHHHhhcccCCCC---CCCCCHHHHHHHH-h---c-c-CCCC------CC--CCCChhHhhcch--
Q 021674 58 SVFYSFGSLGTVWFTVWLSKAHSSPAE---DPQLRPAEKKLIV-S---S-C-ASKE------PV--KTIPWGLILSKP-- 118 (309)
Q Consensus 58 ~~F~i~~~~~~v~~~~~~~~~~~~p~~---~~~~~~~~~~~~~-~---~-~-~~~~------~~--~~~~~~~l~~~~-- 118 (309)
++|.+.++++++. .++.+..||+|+. +.+.++++++... . + . ..++ +. .+.+++++++++
T Consensus 205 ~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 283 (502)
T TIGR00887 205 ILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFK 283 (502)
T ss_pred HHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhh
Confidence 9998766555543 3444567888873 1111111111111 0 0 0 0000 00 112466776532
Q ss_pred -HHHHH----HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhh------------HhhhhHHHHHHHHHHHHHHHHHH
Q 021674 119 -PVWAL----IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL------------FCVLPWLTMAFSANLGGWIADTL 181 (309)
Q Consensus 119 -~~~~~----~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~------------~~~~~~~~~~ig~~~~G~l~dr~ 181 (309)
+.++. ....++....+|+...|.|+++++ .|++..+++. ...+..++..++.++.++++||+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~ 362 (502)
T TIGR00887 284 WRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII 362 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22221 222344455678889999999964 6887654321 12333445667888999999999
Q ss_pred HHcCCChhhHHHHHHHHhhHHHHHHHHHhh-ccCc-hHHHHHHHHHHH-hhhhhhhcchhhhhhccC-CCchHHHHHHHh
Q 021674 182 VSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-HVDS-PAMAVLCMACSQ-GTDAFSQSGLYSNHQDIA-PRYSGVLLGLSN 257 (309)
Q Consensus 182 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~g~a~~~~~ 257 (309)
|||+..... .+........+.... .... ......+....+ +.+. .+..+....|.. ++.|+.+.++.+
T Consensus 363 gRR~~l~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~E~~p~~~R~~~~g~~~ 434 (502)
T TIGR00887 363 GRKPIQLMG------FFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGP--NATTFIVPGEVFPTRYRSTAHGISA 434 (502)
T ss_pred cchhHHHHH------HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC--CchhhhhhhccCchhHHHHHHHHHH
Confidence 987422110 000000111111111 1111 111111111111 1111 111222234444 467999999999
Q ss_pred HhHhhhhhHHHhHHHhhcccC----------CchHHHHHHHHHHHHHHHHHHh-hcCCcc
Q 021674 258 TAGVLAGVFGTAATGYILQHG----------SWDDVFKVSVGLYLVGTAVWNL-FSTGEK 306 (309)
Q Consensus 258 ~~~~lgg~i~~~~~g~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 306 (309)
..++++++++|.+.+++.|.. ++...|.+.+++.+++.+.+.+ ..|+++
T Consensus 435 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 435 ASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred HHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 999999999999999999852 2345666666666655444332 344443
No 49
>PRK12382 putative transporter; Provisional
Probab=99.89 E-value=3.3e-21 Score=176.90 Aligned_cols=266 Identities=14% Similarity=0.138 Sum_probs=169.5
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
||++.+...|+..+++.|++|+|||++++++.+.+.+.|..+|+++++++.+++|||+.+.+..++.++.. ...++.+|
T Consensus 122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 200 (392)
T PRK12382 122 LGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW-AFNGTVRK 200 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HHHHhccC
Confidence 57888888999999999999999999999999999999999999999999999999998876554443322 22222222
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++ + + +.+.++.+| ..|.......+..........|.|.|+++ .|++ +.+...
T Consensus 201 ~~~~~-----~-----------~----~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~ 255 (392)
T PRK12382 201 VPAHA-----G-----------E----RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTL 255 (392)
T ss_pred CCCCc-----c-----------c----CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHH
Confidence 11100 0 0 001122221 12221122233334556677899999976 4664 456666
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (309)
....++..++.+..|++.||+++|+.... ............ ...++...... ....+.+.+. ..+....
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~ 325 (392)
T PRK12382 256 TAFGGAFVLMRVLFGWMPDRFGGVKVAIV-------SLLVETVGLLLL--WLAPTAWVALAGAALTGAGCSL-IFPALGV 325 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeehHH-------HHHHHHHHHHHH--HHcccHHHHHHHHHHHHHHHHh-HHHHHHH
Confidence 66677788899999999999987643211 111111111111 12223332222 2222222211 1121222
Q ss_pred h-hhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 240 N-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 240 ~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
. .+..+++++|.+.++.+...++++.++|.+.|.+.|+.+|+..|.+.+.+.+++.+....+.
T Consensus 326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 326 EVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 2 23356688999999999999999999999999999998899999998888877776655444
No 50
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.89 E-value=2.2e-21 Score=188.91 Aligned_cols=295 Identities=14% Similarity=0.107 Sum_probs=177.0
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------------CCcchhHhhhhHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------------GWPSVFYSFGSLG 67 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------------gWr~~F~i~~~~~ 67 (309)
+|+|.|+..|....+++|++|+++||+.++++.+...+|.++++.++.++.+++ +||+.|++.+++.
T Consensus 265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ 344 (742)
T TIGR01299 265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC 344 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999887777654 5889888766555
Q ss_pred HHHHHHHHhhcccCCCCCCC-CCHHHH-HHHH-----------------------hccCCC-----CCCCC---------
Q 021674 68 TVWFTVWLSKAHSSPAEDPQ-LRPAEK-KLIV-----------------------SSCASK-----EPVKT--------- 108 (309)
Q Consensus 68 ~v~~~~~~~~~~~~p~~~~~-~~~~~~-~~~~-----------------------~~~~~~-----~~~~~--------- 108 (309)
++. ++..+..||+|+.... .+.++. +.++ .....+ +....
T Consensus 345 ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (742)
T TIGR01299 345 VFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVR 423 (742)
T ss_pred HHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhh
Confidence 443 3444557888753110 000000 0000 000000 00000
Q ss_pred ---------CChhHhhcchH---HHHHHHHHHHHHHHHHHHHHhHHHHHHHH----h-----------------------
Q 021674 109 ---------IPWGLILSKPP---VWALIVSHFCHNWGTFILLTWMPTYYNQV----L----------------------- 149 (309)
Q Consensus 109 ---------~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~wlp~~l~~~----~----------------------- 149 (309)
.+++.+|+.|. .+.+++..++..+++|++.+|+|.++++. +
T Consensus 424 ~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (742)
T TIGR01299 424 ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLEN 503 (742)
T ss_pred hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhh
Confidence 02344554433 34456677888889999999999987541 0
Q ss_pred --------------CCCc--------------------------------------------------------------
Q 021674 150 --------------HFNL-------------------------------------------------------------- 153 (309)
Q Consensus 150 --------------g~s~-------------------------------------------------------------- 153 (309)
|+..
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 583 (742)
T TIGR01299 504 QIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGC 583 (742)
T ss_pred hhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCcc
Confidence 0000
Q ss_pred -----------cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-
Q 021674 154 -----------TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL- 221 (309)
Q Consensus 154 -----------~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (309)
........+..++..++.+++|+++||+|||+. +..++++.+++........+....+.
T Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~---------l~~~~~lsai~~ll~~~~~s~~~ll~~ 654 (742)
T TIGR01299 584 PIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM---------LAGSMVLSCISCFFLSFGNSESAMIAL 654 (742)
T ss_pred CccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 001223445567889999999999999997631 12222222222222222222222222
Q ss_pred HHHHHHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH-H
Q 021674 222 CMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW-N 299 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~ 299 (309)
..+.++.... ..+..+....|..| +.|+++.|+.++.+++|++++|.++|.+.+.. ....|.+.+++.+++++.. .
T Consensus 655 ~~l~g~~~~~-~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-~~~pf~i~a~~lll~~ll~~~ 732 (742)
T TIGR01299 655 LCLFGGLSIA-AWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-KAAPILFASAALACGGLLALK 732 (742)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHh
Confidence 1112221111 12223333445545 67999999999999999999999999888753 4556666665655554433 3
Q ss_pred hhcCCccc
Q 021674 300 LFSTGEKV 307 (309)
Q Consensus 300 ~~~~~~~~ 307 (309)
+..|+++.
T Consensus 733 LPET~~~~ 740 (742)
T TIGR01299 733 LPDTRGQV 740 (742)
T ss_pred CCCCcccc
Confidence 34555443
No 51
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=5e-21 Score=177.07 Aligned_cols=268 Identities=9% Similarity=0.006 Sum_probs=169.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
||++++...+....++.|++|++||++++++++.+.++|..+|+.+++.+.+++|||+.|++.++++++..+......||
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57888877778888999999999999999999999999999999999999999999999999888776654333333454
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++ +.+.+. ...++++++|||++|...+...+.....+.+.++.|.++++.+|+++.+.++..
T Consensus 194 ~~~~~~~-~~~~~~------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~ 260 (413)
T PRK15403 194 TVKRGAV-PFSAKS------------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQ 260 (413)
T ss_pred CccccCC-CCChHH------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHH
Confidence 3321100 000000 011356789999999887777777777888889999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (309)
.+...+..+++.+.+.+.+|..+++. ... ......++..... .......+........ ...+.+.+. ..+...+
T Consensus 261 ~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~-~~~~~~ig~~l~~--~~~~~~~~~~~~~~~~~~l~~~G~~~-~~p~~~~ 335 (413)
T PRK15403 261 VPVFGAVIVANAIVARFVKDPTEPRF-IWR-AVPIQLVGLALLI--VGNLLWPHVWLWSVLGTSLYAFGIGL-IFPTLFR 335 (413)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchhH-HHH-HHHHHHHHHHHHH--HHHHHccccHHHHHHHHHHHHHHHHH-HhHHHHH
Confidence 77777777777777665543322211 100 0001111111111 1111112222111111 111222211 1122221
Q ss_pred hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHH
Q 021674 240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVS 287 (309)
Q Consensus 240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~ 287 (309)
..........|++.++.+.....+...++...|++.+++ -...|...
T Consensus 336 ~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~ 382 (413)
T PRK15403 336 FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG-GRLPFHLL 382 (413)
T ss_pred HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHH
Confidence 111112234688999999999899999999999987774 34444443
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.88 E-value=5.6e-21 Score=175.90 Aligned_cols=279 Identities=16% Similarity=0.163 Sum_probs=173.8
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|++. +..|....++.+++|++||+++.++...+.++|..+++++++.+.+++|||+.|++.+++.++..+......+|+
T Consensus 118 g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 118 GLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4443 456788889999999999999999999999999999999999999999999999988776655433333333432
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHH-HHHHHHHHHHHHHHHhHHHHHHHHhCCCcc---chh
Q 021674 82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALI-VSHFCHNWGTFILLTWMPTYYNQVLHFNLT---ESG 157 (309)
Q Consensus 82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~---~~g 157 (309)
+++++ ++++.+ ..+..+.+|+|+.+... ...++..........++|.|+++..+.... ..+
T Consensus 197 ~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 261 (408)
T PRK09874 197 FQPVS--KKEMLH-------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISG 261 (408)
T ss_pred ccccc--chhhhH-------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 21110 000000 00112345676655432 223333344455668889998875443221 245
Q ss_pred hHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcc
Q 021674 158 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSG 236 (309)
Q Consensus 158 ~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 236 (309)
.+.....++..++.+..|+++||+++|+... .......+........++++... .....+.+.+.. .+.
T Consensus 262 ~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~ 331 (408)
T PRK09874 262 MIASVPGVAALLSAPRLGKLGDRIGPEKILI---------TALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGAL-LPA 331 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHH---------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhh-HHH
Confidence 5556667788889999999999998764211 11111111111111222333222 222222222211 121
Q ss_pred hhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674 237 LYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 306 (309)
Q Consensus 237 ~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (309)
..... ...+++++|...++.+...++|..++|.+.|.+.|+.+|+..|.+.+++.+++.+......+|++
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~~ 402 (408)
T PRK09874 332 VQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRR 402 (408)
T ss_pred HHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22222 23455778999999999999999999999999999988999999888888777766555444443
No 53
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=1.3e-20 Score=173.47 Aligned_cols=258 Identities=13% Similarity=0.132 Sum_probs=169.7
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...+...+++.|++|+++|++..+..+...++|..+++.+++++.+++|||+.|++.+.+.++..+..+ ..+|
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 182 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL-RLKP 182 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 467777777888889999999999999999999999999999999999999999999999988777765543332 2333
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
++++++ +++ ++.++++++|+|+.+.......+....++.+.+|.|.++++ +|+++.+.++..
T Consensus 183 ~~~~~~----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~ 244 (401)
T PRK11043 183 SKKARK----QSQ-------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSY 244 (401)
T ss_pred CCCccc----cch-------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHH
Confidence 221110 000 01245678889888766655555556677888999999865 799999999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (309)
....++..++..+.+++.||+++|+... ............+........++...... ....+.+.+.. .+....
T Consensus 245 ~~~~~~~~~g~~~~~~l~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 319 (401)
T PRK11043 245 VPQTIAFLVGGYGCRAALQKWGGEQLLP----WLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAI-YPIVVA 319 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHH----HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 7778888899999999999987653110 01111111111111111111222222211 11122222111 122222
Q ss_pred hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674 240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 282 (309)
Q Consensus 240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~ 282 (309)
...+..|+++|.+.++.|+.++.++..++.+.|.+.|......
T Consensus 320 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 320 QALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 2233456789999999999999999999999999988644433
No 54
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.88 E-value=6.2e-21 Score=179.49 Aligned_cols=291 Identities=14% Similarity=0.106 Sum_probs=163.2
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHh--------hhcCCcchhHhhhhHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFT 72 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~--------~~~gWr~~F~i~~~~~~v~~~ 72 (309)
||++.|+..|...++++|++|+||||+++++...+..+|.++++.++..+. +++|||+.|++.+++.++..+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM 209 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999887766543 467999999987776665433
Q ss_pred HHHhhcccCCCCCC-CCCHHHHHHHHhccCCC-CCCC-CCChhHhhcc-----hHHHH-----H----HHHHHHHHHHHH
Q 021674 73 VWLSKAHSSPAEDP-QLRPAEKKLIVSSCASK-EPVK-TIPWGLILSK-----PPVWA-----L----IVSHFCHNWGTF 135 (309)
Q Consensus 73 ~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~~~-----~~~~~-----~----~~~~~~~~~~~~ 135 (309)
.....||+|+... +.++++.+...++.... +..+ ..+.++.+++ +..+. . ....+....+.+
T Consensus 210 -~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (479)
T PRK10077 210 -LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGIN 288 (479)
T ss_pred -HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChh
Confidence 3334577664211 11111111111100000 0000 0001111110 11100 0 011111122334
Q ss_pred HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCc
Q 021674 136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS 215 (309)
Q Consensus 136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (309)
...+|.|.++++ .|++..+......+..+...++.+++|+++||++||+..... ........+.+......+.
T Consensus 289 ~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~------~~~~~v~~~~l~~~~~~~~ 361 (479)
T PRK10077 289 VVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIG------ALGMAIGMFSLGTAFYTQA 361 (479)
T ss_pred HHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHh------HHHHHHHHHHHHHHHhcCc
Confidence 556677887754 799888788777788889999999999999999876422110 0111111111111111111
Q ss_pred hH-HHHHHH-HHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhc------ccCCchHHHHH
Q 021674 216 PA-MAVLCM-ACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYIL------QHGSWDDVFKV 286 (309)
Q Consensus 216 ~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~------~~~~~~~~~~~ 286 (309)
.. ....++ ..+.+......+..+....|. +++.|+.+.|+.+..+++++++++.+.+.+. |+.++...|.+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 441 (479)
T PRK10077 362 PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWI 441 (479)
T ss_pred ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHH
Confidence 11 211111 111111111011222333344 4578999999999999999999876665443 45556667776
Q ss_pred HHHHHHHHHHHHH
Q 021674 287 SVGLYLVGTAVWN 299 (309)
Q Consensus 287 ~~~~~~~~~~~~~ 299 (309)
.+++.+++.+...
T Consensus 442 ~~~~~~~~~~~~~ 454 (479)
T PRK10077 442 YGCMGVLAALFMW 454 (479)
T ss_pred HHHHHHHHHHHHH
Confidence 6655555544433
No 55
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.88 E-value=9.9e-21 Score=165.12 Aligned_cols=273 Identities=16% Similarity=0.198 Sum_probs=192.8
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-CCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
|.|.+.......+++.+.|| ||-+..+|+++.+.++|+.+++.+...+.++. |||......+.++++.++.|++.. .
T Consensus 110 G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~-~ 187 (395)
T COG2807 110 GAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA-L 187 (395)
T ss_pred HhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc-c
Confidence 44555556666778889999 66899999999999999999999999999987 799999999999988877777542 1
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++ . +.+ ..+ ..+.+.++|||..|.+.+.+-+.+..+|..+.|+|.+++| +|+|..++|.+.
T Consensus 188 r~~-~----~~~--------~~~----~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~ll 249 (395)
T COG2807 188 REQ-A----ASI--------ATK----LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLL 249 (395)
T ss_pred ccc-c----ccc--------ccc----cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHH
Confidence 110 0 000 000 1122458999999999999999999999999999999986 699999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhh-hhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTD-AFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 239 (309)
+...+.....+++..++.+|...++.... ....+....++-........+++.. +..+.+.+ .+.......
T Consensus 250 sl~~l~~~~~~ll~P~la~R~~n~r~~~~------~~~~~~l~G~~G~~~~P~~~~~lw~--~llG~G~G~~F~laL~li 321 (395)
T COG2807 250 SLMQLAQLPTALLIPLLARRSKNQRPLVV------LALLLMLVGLVGLLLAPGQLPILWA--LLLGLGQGGAFPLALTLI 321 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHH------HHHHHHHHHHHHHHHhhhhHHHHHH--HHHhCccchHHHHHHHHH
Confidence 99999999999999999999654432111 1111111111111122223333332 22333321 222222222
Q ss_pred hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 240 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 240 ~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
..+..+|++.+.-++..+.++|+-+++||.+.|++-|. ++|+..+...+.+.+...+.-+...
T Consensus 322 ~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 322 LLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 33445678888999999999999999999999999998 8899888777766655554434444
No 56
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.88 E-value=2.1e-20 Score=172.27 Aligned_cols=272 Identities=14% Similarity=0.122 Sum_probs=165.7
Q ss_pred cccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-cCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674 5 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 83 (309)
Q Consensus 5 ~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~ 83 (309)
.+...|+..+++.|++|+|||+++.++...+.++|.++++.+++++.+. +|||..|++.+++.++..+. ....+|+++
T Consensus 108 ~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~ 186 (402)
T PRK11902 108 SASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEV 186 (402)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCcc
Confidence 4456678889999999999999999999999999999999999999886 59999999877766554332 223343222
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhh
Q 021674 84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLP 163 (309)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~ 163 (309)
++++ +++.++ +. ..++++++|||.++......++.+........+.+.++.+++|+++.+.+++....
T Consensus 187 ~~~~-~~~~~~---------~~--~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~ 254 (402)
T PRK11902 187 PARP-PRSLGE---------AV--VGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTL 254 (402)
T ss_pred cccc-cchhHH---------HH--HHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHH
Confidence 1110 000000 00 12456789999988776666665555444456777788888999999999987655
Q ss_pred H-HHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc-cCchHHHHHHHHH---HHhhhhhh-hcch
Q 021674 164 W-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMAC---SQGTDAFS-QSGL 237 (309)
Q Consensus 164 ~-~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~-~~~~ 237 (309)
+ ++..++.+++|++.||+++|+... ..........+.+..... .++.+........ ..+..... ....
T Consensus 255 ~~~~~i~g~~~~g~l~~r~g~~~~l~------~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 328 (402)
T PRK11902 255 GLAATIVGALAGGTLMVRLGLYRSLM------LFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALL 328 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 468899999999999998763110 011111111111111111 1232222222111 11111000 1111
Q ss_pred hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH
Q 021674 238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 298 (309)
....++. ..+...++.+....+++.+++.+.|.+.|+.||...|.+.+.+.+++.+..
T Consensus 329 ~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 329 MALCNRS---FSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHhcCCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 1111221 223334455555566776667789999999889998988887777665443
No 57
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=1.3e-20 Score=172.61 Aligned_cols=267 Identities=10% Similarity=0.019 Sum_probs=174.0
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|.+.+...|.+.++..++ +|||+++.|......++|.++++++++++.+++|||..|++...+..+.. ... ..+++
T Consensus 105 ~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~-~~~~~ 180 (382)
T TIGR00902 105 ALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGF-LIKPT 180 (382)
T ss_pred HHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHH-HcCCC
Confidence 455667788888887664 57899999999999999999999999999999999999988655432222 222 22222
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
++++++ ++ ++ +++ +..++++++|||++|...+..++...+...+.+|.|.|+++ +|.|..+.|.+..
T Consensus 181 ~~~~~~-~~-~~--------~~~--~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~ 247 (382)
T TIGR00902 181 IPPKDA-IP-ED--------ESQ--GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWG 247 (382)
T ss_pred CCCCcc-cc-cc--------ccc--cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHH
Confidence 111110 00 00 000 12245778999999988888888778888999999999976 8999999999888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSN 240 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (309)
...++..++..+.+++.||++.|+ . ...+.....+........++++..+. ...-+...+.+ .......
T Consensus 248 ~~~~~~i~~~~~~~~l~~r~g~~~--------~-l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~-~~~~~~~ 317 (382)
T TIGR00902 248 IGVLAEIIIFAFSNKLFQNCSARD--------L-LLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVC-HLAAMRY 317 (382)
T ss_pred HHHHHHHHHHHHhHHHHhhCCHHH--------H-HHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 777888888888888888887653 1 11222222211111222333332221 11112222211 1122222
Q ss_pred hhccCCCchHHHHHHHhH-hHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHH
Q 021674 241 HQDIAPRYSGVLLGLSNT-AGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA 296 (309)
Q Consensus 241 ~~~~~~~~~g~a~~~~~~-~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 296 (309)
.++.+++.++.+.++.|. ...+|..++|.+.|++.|+.++ ..|...+.+.+++.+
T Consensus 318 i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 318 IAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 234456678888888774 4568889999999999999765 567766666665543
No 58
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.88 E-value=2.6e-21 Score=175.48 Aligned_cols=252 Identities=17% Similarity=0.152 Sum_probs=154.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh----------hcCCcchh-HhhhhHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVF-YSFGSLGTV 69 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~----------~~gWr~~F-~i~~~~~~v 69 (309)
+|++.+ .++....+++|++|+|||++++++.....++|..+++.+++.+.+ +.+||+.| +..+++..+
T Consensus 101 ~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 101 IGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence 466654 456678999999999999999999998888888888877776665 34899999 444554444
Q ss_pred HHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 021674 70 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL 149 (309)
Q Consensus 70 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~ 149 (309)
...+.+...+|+|+++++.++.+. .++....++....+.++.+|+|++|...+..++.....+.+.+|+|.|+++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
T TIGR00886 180 PALLIFFVGADTPPGKPATGKLSF---KGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQF 256 (366)
T ss_pred HHHHHHHhcccCCcccccchhccc---ccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333333333444432211000000 00000000000113456788998888777777666667888999999999999
Q ss_pred CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC--chHHHHH-HHHHH
Q 021674 150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVL-CMACS 226 (309)
Q Consensus 150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~ 226 (309)
|+++.+++.+..+..+...++.++.|+++||+++|+... ..................+ +...... .....
T Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (366)
T TIGR00886 257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLL-------MSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALF 329 (366)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHH-------HHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 999999999888888999999999999999998764221 1111111111111111221 2222111 11111
Q ss_pred HhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhh
Q 021674 227 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG 264 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg 264 (309)
...+ ...+..++...+..|+++|.+.|+.+..+++|+
T Consensus 330 ~~~g-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 330 FFSG-AGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHhc-cccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence 1111 122233444445667889999999999988764
No 59
>TIGR00895 2A0115 benzoate transport.
Probab=99.88 E-value=1.3e-20 Score=172.25 Aligned_cols=264 Identities=23% Similarity=0.333 Sum_probs=164.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...|...+++.|++|+++|++++++...+..+|..+++.+++++.+.+|||+.|++.+++..+...+.....+|
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 115 AGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred HhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 47889999999999999999999999999999999999999999999999999999999998766555443333334455
Q ss_pred CCCCCCCCCHHHHHH----HHhc---c----CCCCCC----CCCChhHhhcch---HHHHHHHHHHHHHHHHHHHHHhHH
Q 021674 81 SPAEDPQLRPAEKKL----IVSS---C----ASKEPV----KTIPWGLILSKP---PVWALIVSHFCHNWGTFILLTWMP 142 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~----~~~~---~----~~~~~~----~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~wlp 142 (309)
+++...+.+++++.. ..++ + .++++. ++..++.+++++ +.+......++.....+...+|+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (398)
T TIGR00895 195 SIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP 274 (398)
T ss_pred CChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433111111111000 0000 0 000000 001122233332 233344445555667778889999
Q ss_pred HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HH
Q 021674 143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VL 221 (309)
Q Consensus 143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 221 (309)
++.+++|++..+.+.......++..++.++.|+++||+++|. . .. ................++.... ..
T Consensus 275 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
T TIGR00895 275 -KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-T-------AL-LLLLGAVFAVLVGSTLFSPTLLLLL 344 (398)
T ss_pred -HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-H-------HH-HHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 666678999999999999999999999999999999998651 1 11 1111111111111111222222 22
Q ss_pred HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 222 CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
....+.+.+. ..+.......+ .+++.++.+.|+.+...++++.++|.+.|+++
T Consensus 345 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ll 398 (398)
T TIGR00895 345 GAIAGFFVNG-GQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYLL 398 (398)
T ss_pred HHHHHHHHHH-HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhcC
Confidence 2222222221 12222333333 35578999999999999999999999999763
No 60
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.87 E-value=2.3e-20 Score=166.01 Aligned_cols=266 Identities=12% Similarity=0.071 Sum_probs=174.0
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh----------------hcCCcchhHhhhh
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------------RFGWPSVFYSFGS 65 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~----------------~~gWr~~F~i~~~ 65 (309)
|.|.+...+.+..++++..|+|++++.+++..+.+++|.+++|.+++.+.. ..+||++|++.+.
T Consensus 21 g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~ 100 (310)
T TIGR01272 21 ASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAG 100 (310)
T ss_pred HhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 678888999999999999999999999999999999999999999998873 2479999997766
Q ss_pred HHHHHHHHHHh-hcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 021674 66 LGTVWFTVWLS-KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 144 (309)
Q Consensus 66 ~~~v~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~ 144 (309)
+..+..+.+.+ ..|| .+++ ++++. .+++ ..+.++++|+|..+...+..++..-.--+..+|+|.|
T Consensus 101 ~~~~~~i~~~~~~~p~---~~~~--~~~~~------~~~~---~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~y 166 (310)
T TIGR01272 101 ALAVLAIIFAFLPLPE---LQEA--DVARV------SSGD---TTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNF 166 (310)
T ss_pred HHHHHHHHHHHccCCC---CCcc--ccccc------cccc---ccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65444333322 2222 1111 00000 0000 0112346788888876666666554567889999999
Q ss_pred HHHH--hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH
Q 021674 145 YNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC 222 (309)
Q Consensus 145 l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
+.+. +|+++.+.++..+....++.+|.+++++++||+++|+. +. ......+.........+........
T Consensus 167 l~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~--------l~-~~~~l~~~~~~l~~~~~~~~~~~~~ 237 (310)
T TIGR01272 167 LSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY--------LA-FNAFLAVLLSIGAALTHGYVAMWFV 237 (310)
T ss_pred HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH--------HH-HHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9864 58999999999999999999999999999999987631 11 1111111111111111222111222
Q ss_pred HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674 223 MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 292 (309)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 292 (309)
...+++.+ ...+..++...+..|+..+.++++. ..+.+|+++.|.+.|.+.|..+.+..|++...+++
T Consensus 238 ~l~g~~~s-~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~ 305 (310)
T TIGR01272 238 LALGLFNS-IMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL 305 (310)
T ss_pred HHHHHHHH-HHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 22232222 1122233333333455566777775 56889999999999999998778888776555544
No 61
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=4.3e-20 Score=169.53 Aligned_cols=170 Identities=15% Similarity=0.153 Sum_probs=129.7
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...+....++.|++|+|||+++.++.+...++|..+++.+++.+.+..|||+.|++.+.+.++...+.+...+|
T Consensus 101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 47788888899999999999999999999999999999999999999998889999999999887766554443334444
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++ +++ + ...+.++.+|||+.+.......+.....+.+..+.|.++++++|+++.+.+.+.
T Consensus 181 ~~~~~~~---~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 245 (392)
T PRK10473 181 TRPARAP---AAS----------S--KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIM 245 (392)
T ss_pred CCCcccC---Ccc----------c--hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHH
Confidence 3221100 000 0 011234567888877655544444444556778889999999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~ 185 (309)
....++..++.++.+++.||+++|+
T Consensus 246 ~~~~~~~i~~~~~~~~l~~r~g~~~ 270 (392)
T PRK10473 246 ALTAGVSMTVSFSTPFALGIFKPRT 270 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 8889999999999999999998763
No 62
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.87 E-value=9.3e-21 Score=171.61 Aligned_cols=252 Identities=13% Similarity=0.126 Sum_probs=163.5
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc--CCcchhHhhhhHHHHHHHHHHhhc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWLSKA 78 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~--gWr~~F~i~~~~~~v~~~~~~~~~ 78 (309)
+|+|.+...+....++.|++| +||++++++.+.+.++|..+++.+++.+.++. +||+.|.+.+.+.++....+.
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~--- 172 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWI--- 172 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh---
Confidence 367777777788888999997 68999999999999999999999999988875 399999876655443322222
Q ss_pred ccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhh
Q 021674 79 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL 158 (309)
Q Consensus 79 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~ 158 (309)
++.++++++ + + +.+..+.++++|||..|......++....++...+|+|.|+++ +|++..+.+.
T Consensus 173 ~~~~~~~~~----~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~ 236 (355)
T TIGR00896 173 PQVRRRVAA----N----------Q-TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGS 236 (355)
T ss_pred hhhccccCC----C----------C-CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 221111100 0 0 0001234567899998877766666667788899999999986 7999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchh
Q 021674 159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 238 (309)
Q Consensus 159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
+.+...++..++.++.|+++||+++|+.. .................... +... ......+.+.+.. .+...
T Consensus 237 ~~~~~~~~~i~~~~~~g~l~dr~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~l~g~~~g~~-~~~~~ 307 (355)
T TIGR00896 237 LLALMQLAQAASALLIPALARRVKDQRGI------VAVLAVLQLVGLCGLLFAPM-HGLW-AWALVLGLGQGGA-FPLAL 307 (355)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchHH------HHHHHHHHHHHHHHHHHhhh-hHHH-HHHHHHHHhhhhH-hHHHH
Confidence 99999999999999999999999654311 11111111111111111111 1111 1122222222211 11111
Q ss_pred hh-hhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCch
Q 021674 239 SN-HQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWD 281 (309)
Q Consensus 239 ~~-~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~ 281 (309)
+. ..+. ++++++...++.+..+++++.++|.+.|++.|+ ++|.
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 308 TLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 11 1222 345678889999999999999999999999997 4453
No 63
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=1.1e-19 Score=167.00 Aligned_cols=257 Identities=13% Similarity=0.105 Sum_probs=169.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...+....+..|++|++||+++.++.+.+..++..+++++++++.++.|||+.|++.+++.++.........+|
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36677777888888999999999999999999999999999999999999999999999998777665543333334454
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++ +++ ...++++++|||+.|......+....+...+.++.|.++++.+|+|+.+.++..
T Consensus 186 ~~~~~~~--~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (394)
T PRK11652 186 TRPADAR--RTR--------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILF 249 (394)
T ss_pred cCccccc--hhH--------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHH
Confidence 3322111 000 012356678898887655555555555556667889999998999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH--HhhccCchHHHHH-HHHHHHhhhhhhhcch
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT--QLSHVDSPAMAVL-CMACSQGTDAFSQSGL 237 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (309)
....++..+++.+.+++.||.+++. ............... ......+.+.... ....+.+.+ ...+..
T Consensus 250 ~~~~~~~~~g~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~ 320 (394)
T PRK11652 250 ILPIPAAFFGAWFAGRPNKRFSTLM--------WQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAG-MLFPLA 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-HHHHHH
Confidence 8777888888888888888886321 111111111111111 1111112222221 111222222 112223
Q ss_pred hhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674 238 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 282 (309)
Q Consensus 238 ~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~ 282 (309)
.+...+..|+++|.+.++.+...++|+.+++.+.+.+.+...+..
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 365 (394)
T PRK11652 321 TSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSL 365 (394)
T ss_pred HHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence 333345556788999999999999999999999999876654443
No 64
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.87 E-value=2.1e-20 Score=171.17 Aligned_cols=267 Identities=11% Similarity=0.086 Sum_probs=170.4
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|++.+...|.+.++..+| ++||+++.+......++|.++|+++++++.+++|||..|++.+...++.. +.....+|+
T Consensus 105 g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~ 181 (382)
T PRK11128 105 NLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML-LGQLLRPTI 181 (382)
T ss_pred HHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHccCCC
Confidence 556778888888887777 46788889999999999999999999999999999999997665443332 222222321
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
+ |+. ++++ ..+++ ..++++++|||++|......++.........+++|.|+++ .|++..+.|.+..
T Consensus 182 ~---~~~-~~~~-------~~~~~--~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~ 247 (382)
T PRK11128 182 M---PQG-ESRQ-------QESAG--WPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWS 247 (382)
T ss_pred C---Ccc-cccc-------ccccc--cchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHH
Confidence 1 110 0000 00011 2357889999999988777777766777788899999965 7999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSN 240 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (309)
...++..+...+.|++.||+++|+. + ..+.....+........++++..+. ....+.+.+.. .+.....
T Consensus 248 ~~~~~~~~~~~~~g~l~~r~~~~~~--------l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~ 317 (382)
T PRK11128 248 LGVVAEVLIFAFSNRLFRRWSARDL--------L-LLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC-HLAAMRY 317 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHH--------H-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 8888888888999999999886531 1 1122222222111223334443322 22222222211 1222222
Q ss_pred hhccCCCchHHHHHHHhHhH-hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHH
Q 021674 241 HQDIAPRYSGVLLGLSNTAG-VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA 296 (309)
Q Consensus 241 ~~~~~~~~~g~a~~~~~~~~-~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 296 (309)
..+.++++.+...+..+... .+|..++|.+.|.+.|+.++ ..+...+++.+++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 318 IAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 23345555677788776443 45668999999999998665 355555555554443
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.87 E-value=2.7e-20 Score=171.55 Aligned_cols=270 Identities=11% Similarity=0.058 Sum_probs=164.0
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++++...|+..+++.|++|+|||++++|+.....++|..+|+++++++. ++|||+.|++.+.+.++..++.....+|
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 109 SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 467777888999999999999999999999999999999999999999998 7899999998776655443332333332
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
. ++++. ++ +. ..++++++|||+++......+...........++|.|+++..+ ++.+.+.+.
T Consensus 188 ~-~~~~~--~~------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~ 249 (400)
T PRK11646 188 Y-KLSTV--RT------------PV--REGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMY 249 (400)
T ss_pred c-ccccc--ch------------hh--HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHH
Confidence 1 11100 00 00 1135677889888765554444333344456789999987644 778888887
Q ss_pred hhhHHHHHHHHHHHHHHHHHH-HHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchh
Q 021674 161 VLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLY 238 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (309)
....+....+....+++.||. +.++ .+. .++.............++....... ...+.+.. ...+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~r~~~~~--------~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~-~~~p~~~ 319 (400)
T PRK11646 250 AIEACLSLTLLYPIARWSEKRFRLEH--------RLM-AGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSI-IAEPARE 319 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhH--------HHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHccHH
Confidence 776666555554555666553 2221 111 1111111111111122223222211 11122211 1112222
Q ss_pred hhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC---C-chHHHHHHHHHHHHHHHHHH
Q 021674 239 SNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG---S-WDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 239 ~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~---~-~~~~~~~~~~~~~~~~~~~~ 299 (309)
.... ..+++++|.+.++.|...++|+.++|.+.|.+.|+. + ....+.....+.+++.+...
T Consensus 320 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 320 TLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 2222 345678999999999999999999999999999873 2 23455554555554544433
No 66
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.87 E-value=6.2e-21 Score=180.31 Aligned_cols=283 Identities=12% Similarity=0.138 Sum_probs=161.8
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.++..+....++.|++|+|+|++++++...+.++|..+++.+.+.+.+++|||+.|++. .+..+.........||
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~-~~~~~~~~~~~~~~p~ 196 (496)
T PRK03893 118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG-ILPIIFALWLRKNLPE 196 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH-HHHHHHHHHHHHhCCC
Confidence 367788889999999999999999999999999999999999999999999999999999873 3333322222223333
Q ss_pred CCCCCCCCCHH-H-HHHHHhccCCCCCCCCCC--------hhHhh-------------------------------cchH
Q 021674 81 SPAEDPQLRPA-E-KKLIVSSCASKEPVKTIP--------WGLIL-------------------------------SKPP 119 (309)
Q Consensus 81 ~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~--------~~~l~-------------------------------~~~~ 119 (309)
+++.+++.+++ + ++........++...... ....+ +.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (496)
T PRK03893 197 AEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPT 276 (496)
T ss_pred chhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhH
Confidence 22111000000 0 000000000000000000 00000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~ 199 (309)
........++.....+....|+|.|+++++|++..+.+.+.+...++..++.++.|+++||+++|+. +....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~--------~~~~~ 348 (496)
T PRK03893 277 GVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKA--------YVCSL 348 (496)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--------HHHHH
Confidence 0000001111111112456899999998899999999999999999999999999999999987632 11111
Q ss_pred hHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 200 FLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
.+............+...+.. .........+............+ .+++.++.+.++.+...++|+.++|.+.|.+.|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 349 LISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 111111111111111221111 11111101110111111122233 3456899999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHH
Q 021674 278 GSWDDVFKVSVGLYL 292 (309)
Q Consensus 278 ~~~~~~~~~~~~~~~ 292 (309)
.++...+.....+..
T Consensus 429 ~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 429 LDLGTALASLSFSLT 443 (496)
T ss_pred CChHHHHHHHHHHHH
Confidence 778777655444433
No 67
>PRK10133 L-fucose transporter; Provisional
Probab=99.87 E-value=2.6e-20 Score=173.53 Aligned_cols=281 Identities=10% Similarity=0.115 Sum_probs=176.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh------------------h--------c
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH------------------R--------F 54 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~------------------~--------~ 54 (309)
||+|.|...+....++.++.|++||.+.+++.+...++|..+|+.+++.+.. . .
T Consensus 127 ~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~ 206 (438)
T PRK10133 127 IAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVL 206 (438)
T ss_pred HHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHH
Confidence 5889999999999999998888888888999999999999999988876541 0 3
Q ss_pred CCcchhHhhhhH-HHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHH
Q 021674 55 GWPSVFYSFGSL-GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG 133 (309)
Q Consensus 55 gWr~~F~i~~~~-~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 133 (309)
+||++|+....+ .++..++..+..||.+++++ +++ ++.+ ...++++++|+|.++...+..++....
T Consensus 207 ~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~----~~~--------~~~~-~~~~~~~ll~~~~~~~~~l~~~~~~~~ 273 (438)
T PRK10133 207 SVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH----SDA--------KQGS-FSASLSRLARIRHWRWAVLAQFCYVGA 273 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc----ccc--------cccc-hhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 577777643332 22222222222232111100 000 0000 012346788999988776666777777
Q ss_pred HHHHHHhHHHHH-HHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674 134 TFILLTWMPTYY-NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 212 (309)
Q Consensus 134 ~~~~~~wlp~~l-~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (309)
.++..+|+|+|+ ++.+|+|+.+++....+..+++.++++++|++.||+++|+.. .....+....++... .
T Consensus 274 ~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l--------~~~~~~~~~~~~~~~-~ 344 (438)
T PRK10133 274 QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL--------AAYALIAMALCLISA-F 344 (438)
T ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--------HHHHHHHHHHHHHHH-H
Confidence 788889999996 667899999999999999999999999999999999876321 111111111111111 1
Q ss_pred cCchHHHHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHH
Q 021674 213 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLY 291 (309)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~ 291 (309)
.+.......+..++++.+ ...+..++...+..+++.+.+.++.++ ..+++.++|++.|.+.|..+ .+..|++.+.++
T Consensus 345 ~~~~~~~~~~~l~glg~~-~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~ 422 (438)
T PRK10133 345 AGGHVGLIALTLCSAFMS-IQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCF 422 (438)
T ss_pred cCChHHHHHHHHHHHHHH-HHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 112221122222333322 122334444444456667788887764 55788999999999999865 677787666555
Q ss_pred HHHHHHHHhhcCCcc
Q 021674 292 LVGTAVWNLFSTGEK 306 (309)
Q Consensus 292 ~~~~~~~~~~~~~~~ 306 (309)
+... .+.....|++
T Consensus 423 ~~~~-~~~~~~~~~~ 436 (438)
T PRK10133 423 AVIF-IFARFRSQTA 436 (438)
T ss_pred HHHH-HHHHHhhccc
Confidence 4433 4455555543
No 68
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.86 E-value=6.6e-20 Score=167.77 Aligned_cols=270 Identities=13% Similarity=0.043 Sum_probs=168.0
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...|...+.+.++.|++||++++++++.+.++|..+|+.+++.+.+...|+..+. .+.+.......... +.
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~--~~ 180 (381)
T PRK03633 104 AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFT--RI 180 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHh--cc
Confidence 4788888889888888899999999999999999999999999999999887654443333 23222111111111 11
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+|++++ +++ ..+.++.+|+|..+......+..........+|+|.|+++ .|.++.+.+.+.
T Consensus 181 ~~~~~~----------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~ 241 (381)
T PRK03633 181 LNQQAE----------------NHD--STSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWM 241 (381)
T ss_pred cCCCCC----------------CCC--CCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Confidence 111100 000 1234567888887755444444444455677899999976 699999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 240 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
....++..++.+..|+++||+++|+. +. .+............. ...........+.+... ..+.....
T Consensus 242 ~~~~~~~~~~~~~~g~l~dr~~~~~~--------l~-~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~-~~p~~~~~ 309 (381)
T PRK03633 242 ALLVSAGILGQWPIGRLADRFGRLLV--------LR-VQVFVVILGSIAMLS--QAAMAPALFILGAAGFT-LYPVAMAW 309 (381)
T ss_pred HHHHHHHHHHHhhhHHHHHHcCcHHH--------HH-HHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHh-HHHHHHHH
Confidence 88889999999999999999986631 11 111111111110111 11111111111211111 11222222
Q ss_pred h-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674 241 H-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGE 305 (309)
Q Consensus 241 ~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (309)
. +..++++++.+.+..+...++|+.++|.+.|++.|+.++...|.+.+.+.+++. +...+.+||
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~-~~~~~~~~~ 374 (381)
T PRK03633 310 ACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL-LMLLRKAGH 374 (381)
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH-HHHHhccCC
Confidence 2 233445667777778888899999999999999999889888888777776554 333333343
No 69
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=1.1e-20 Score=195.38 Aligned_cols=275 Identities=12% Similarity=0.072 Sum_probs=181.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
||++.+...|+..+++.+++|++||++++|+.+++.++|.++|+++++++.+..|||+.|+..++..++.. +.....++
T Consensus 118 ~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 196 (1140)
T PRK06814 118 MGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGW-LASLFIPK 196 (1140)
T ss_pred HHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHhhCCC
Confidence 58899999999999999999999999999999999999999999999999999999999955444444332 22223333
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
.+++++..+.... ... +. ...++.+.++|.+|...+..++.+...+.+.+|+|.|+++.+|.++.+.|++.
T Consensus 197 ~~~~~~~~~~~~~-~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~ 267 (1140)
T PRK06814 197 TGNAAPDLKIDRN-IIR------ST--ITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFL 267 (1140)
T ss_pred CCCCCCCCeeccc-hHH------HH--HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHH
Confidence 3222111110000 000 00 11356778999999888777777777788889999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH---------------HhhccCchHHH-HHHHH
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT---------------QLSHVDSPAMA-VLCMA 224 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~~~ 224 (309)
+...+++.+|.++.|+++||..+++..... ....+.....+... .+....+.+.. +..+.
T Consensus 268 ~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1140)
T PRK06814 268 AVFSVGVAVGSFLASKLSEGRITLLYVPIG----ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFG 343 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeeeehHH----HHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHH
Confidence 999999999999999999876654322111 01111100001110 00000122222 22222
Q ss_pred HHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHH
Q 021674 225 CSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGL 290 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~ 290 (309)
.+++.+.+ .....+.. ...+++.+|.+.|+.|+..+++..+++.+.|.+.+. .++...+++...+
T Consensus 344 ~g~~~~~~-~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 344 LAAAGGLY-IVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHh-HHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 23222222 12233333 345667899999999999999999999999999754 4555555544433
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.86 E-value=2.8e-19 Score=160.27 Aligned_cols=250 Identities=29% Similarity=0.491 Sum_probs=183.2
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.+...|...+++.|++|+|||++++++.....++|..+++.+++.+.++.+||+.|++.+.+.++..+..... +
T Consensus 97 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 174 (352)
T cd06174 97 LGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L- 174 (352)
T ss_pred HHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H-
Confidence 47888999999999999999999999999999999999999999999999999999999998777665543322111 0
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
|+++......++..........+.|.++++..|.+..+.+...
T Consensus 175 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T cd06174 175 -------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLL 217 (352)
T ss_pred -------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 4455566666777777888899999999988899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (309)
....++..++.++.|+++||+++|+. .+. .+..............++..... .....+.+.+ ...+....
T Consensus 218 ~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~ 288 (352)
T cd06174 218 SLFGLGGILGALLGGLLSDRLGRRRL-------LLL-IGLLLAALGLLLLALAPSLALLLVALLLLGFGLG-FAFPALLT 288 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhH-------HHH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh-ccchhHHH
Confidence 99999999999999999999987631 111 11111111111112222232222 2222222222 11122222
Q ss_pred hhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH
Q 021674 240 NHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 240 ~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 298 (309)
...+. ++++++...++.+...++++.++|.+.|.+.|..+|...+.+.+++.+++.+..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 289 LASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 23333 447899999999999999999999999999998889998888887777766554
No 71
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=5.7e-19 Score=162.06 Aligned_cols=261 Identities=14% Similarity=0.162 Sum_probs=170.5
Q ss_pred hhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCC
Q 021674 10 PAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR 89 (309)
Q Consensus 10 p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~ 89 (309)
+..-++..|+.++|+++...+....+..+|.++|..+.+++.+++|||..|++.+.+.++..+..+. .+|+++++++
T Consensus 116 ~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~-~~~~~~~~~~-- 192 (390)
T TIGR02718 116 IATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW-LKDRAVASPE-- 192 (390)
T ss_pred HHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCCcCccc--
Confidence 3344467788888888988888999999999999999999999999999999988777654433322 2222111110
Q ss_pred HHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHH
Q 021674 90 PAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMA 168 (309)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~ 168 (309)
+++ + +..++++++|+|..|......++...+.....+|.|.|++| +|+|+.+.|.+.....+ ...
T Consensus 193 -~~~----------~--~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~ 258 (390)
T TIGR02718 193 -APL----------A--RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVL 258 (390)
T ss_pred -cch----------h--hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHH
Confidence 000 0 01235678899988877777777777778888899999987 69999999998877764 667
Q ss_pred HHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH-HHHHHHHHhhc---cCchHHHHHHHHHH-Hhhhhhhhcchhhh-hh
Q 021674 169 FSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQLSH---VDSPAMAVLCMACS-QGTDAFSQSGLYSN-HQ 242 (309)
Q Consensus 169 ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~ 242 (309)
++..++|++.||+++|+.... ..... ...+....... ...+.....+.... +..+ ......+.. .+
T Consensus 259 ~g~~~~g~l~~r~g~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 330 (390)
T TIGR02718 259 LGCGGGAWLVRRAGLWRTFIL-------GVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG-ITSVAIYTAFMR 330 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHH-------HHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 788999999999997642111 11000 00111111011 11222211111111 1111 111222222 22
Q ss_pred ccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674 243 DIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 243 ~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 295 (309)
..++ +.+++..++.|...++|+.++|.+.|.+.|+.+++..|.+.+++.+++.
T Consensus 331 ~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 331 FAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 3344 6789999999999999999999999999998889888888776666554
No 72
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.85 E-value=1.9e-20 Score=173.49 Aligned_cols=274 Identities=11% Similarity=0.105 Sum_probs=164.9
Q ss_pred HHHhccCC--CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHH
Q 021674 14 NILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA 91 (309)
Q Consensus 14 ~~i~~~~p--~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~ 91 (309)
..+.+|.+ +++|++..|......++|..+++++++.+.+ .+||+.|++.+++.++.....+...+|++++ ++.+++
T Consensus 126 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 203 (420)
T PRK09528 126 GAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST-AKVANA 203 (420)
T ss_pred hhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch-hhhccc
Confidence 33445544 3567888899999999999999999998876 5999999987766665443433322332221 110000
Q ss_pred HHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh---CCCccchhhHhhhhHHHHH
Q 021674 92 EKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL---HFNLTESGLFCVLPWLTMA 168 (309)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~---g~s~~~~g~~~~~~~~~~~ 168 (309)
++ .++++.+..+.++++|||++|.+.+..++....+.....+.|.|+.+.. +.+..+.+....+..++..
T Consensus 204 ~~-------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 276 (420)
T PRK09528 204 LG-------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEA 276 (420)
T ss_pred hh-------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Confidence 00 0011111112445788998876655544444444556678899887653 5566677888888888889
Q ss_pred HHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhh-hhccCC
Q 021674 169 FSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDIAP 246 (309)
Q Consensus 169 ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~ 246 (309)
++.++.|+++||+++|+... .+..............++++..+.. ...+.+.... ....... ....++
T Consensus 277 ~~~~~~g~l~dr~g~~~~~~---------~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~ 346 (420)
T PRK09528 277 LIMFFAPFIINRIGAKNALL---------LAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFL-LVGVFKYITLNFDV 346 (420)
T ss_pred HHHHHHHHHHHHhCcchhhH---------HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCc
Confidence 99999999999999774211 1111111111112223344433222 1112111111 1111122 223455
Q ss_pred CchHHHHHH-HhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674 247 RYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 306 (309)
Q Consensus 247 ~~~g~a~~~-~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (309)
+.+++..+. .|+...+|++++|.+.|++.|..||+..|...+++.++..++...+.++++
T Consensus 347 ~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 347 RLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred cceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 667766554 678889999999999999999988999999887777766666555554433
No 73
>TIGR00898 2A0119 cation transport protein.
Probab=99.84 E-value=4.9e-19 Score=167.82 Aligned_cols=287 Identities=14% Similarity=0.037 Sum_probs=161.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.++..|....++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.+ ...+|
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCC
Confidence 5889999999999999999999999999999999999999999988876644 9999998887776554333 45677
Q ss_pred CCCCCC-CCCHHHH-HHH----Hhc--------------cCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHh
Q 021674 81 SPAEDP-QLRPAEK-KLI----VSS--------------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTW 140 (309)
Q Consensus 81 ~p~~~~-~~~~~~~-~~~----~~~--------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w 140 (309)
+|+... +.+.+|. +.. ..+ +..+++.++.++++++|+|+++.......+.... ..+.++
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~ 344 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFT-TAFSYY 344 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHH-HHHHHH
Confidence 664210 1111111 100 000 0000011123567889999887654443322221 122222
Q ss_pred HHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhhccCchHH
Q 021674 141 MPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLSHVDSPAM 218 (309)
Q Consensus 141 lp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 218 (309)
...+..+..+.+.. .......+...++.++.++++||++||+. +. ...+...+. ............
T Consensus 345 ~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~--------~~-~~~~~~~~~~l~~~~~~~~~~~~ 412 (505)
T TIGR00898 345 GLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYT--------MA-ASLLLAGVALLLLLFVPVDLYFL 412 (505)
T ss_pred HHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHH--------HH-HHHHHHHHHHHHHHHcCCCchHH
Confidence 22222223344422 33334566778889999999999987631 11 111111111 111111121122
Q ss_pred HHHHHHH-HHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH-
Q 021674 219 AVLCMAC-SQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT- 295 (309)
Q Consensus 219 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~- 295 (309)
....... .++.. ......+....|..| +.|+.+.|+.++.+++|++++|.+.+ +.+ .++...+.+.+++.+++.
T Consensus 413 ~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 413 RTALAVLGKFGIT-SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHH
Confidence 2221111 11111 111222333344444 67999999999999999999999998 433 334445555444444443
Q ss_pred HHHHhhcCCccc
Q 021674 296 AVWNLFSTGEKV 307 (309)
Q Consensus 296 ~~~~~~~~~~~~ 307 (309)
+.+.+..|+++.
T Consensus 490 ~~~~lpet~~~~ 501 (505)
T TIGR00898 490 LTLFLPETKGVP 501 (505)
T ss_pred HHHcCcCCCCCC
Confidence 333344555544
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.84 E-value=3.3e-19 Score=161.46 Aligned_cols=168 Identities=15% Similarity=0.100 Sum_probs=124.0
Q ss_pred cccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC--------CcchhHhhhhHHHHHHHHHHh
Q 021674 5 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------WPSVFYSFGSLGTVWFTVWLS 76 (309)
Q Consensus 5 ~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g--------Wr~~F~i~~~~~~v~~~~~~~ 76 (309)
.+...|+..+++.|++|+|||+++.++...+.++|.++++.+++.+.+++| ||..|++.+++.++.....+.
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 97 SATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 344557778899999999999999999999999999999999999999988 999999877766554322222
Q ss_pred hcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchH---HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCc
Q 021674 77 KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP---VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 153 (309)
Q Consensus 77 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~ 153 (309)
..+| |+++++.++++++ + . ..++++++|+|. .+...+..++.....+...+|+|+|+++ +|+++
T Consensus 177 ~~~e-~~~~~~~~~~~~~-------~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~ 243 (356)
T TIGR00901 177 LAKE-PQEDASVPKPLTQ-------A--V--LKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSK 243 (356)
T ss_pred hccC-CCcccccchhHHH-------H--H--HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence 2333 2221111111110 0 0 113456777765 6666666666677788899999999988 89999
Q ss_pred cchhhHhhhhH-HHHHHHHHHHHHHHHHHHHcC
Q 021674 154 TESGLFCVLPW-LTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 154 ~~~g~~~~~~~-~~~~ig~~~~G~l~dr~~~r~ 185 (309)
.+.+.+....+ ++..++.+++|+++||+++|+
T Consensus 244 ~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 276 (356)
T TIGR00901 244 EEIALVAKINGLLGAILGGLIGGIIMQPLNILY 276 (356)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 99988876655 577899999999999999764
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.82 E-value=1.4e-18 Score=159.79 Aligned_cols=275 Identities=11% Similarity=0.040 Sum_probs=165.5
Q ss_pred ccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674 4 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 83 (309)
Q Consensus 4 g~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~ 83 (309)
+.+...|....+..+.- +++++..|......++|.++|+++++.+.+ .|||..|++.+.++++..++.+...+|+|+
T Consensus 112 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (396)
T TIGR00882 112 VFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPS 188 (396)
T ss_pred HhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 34444555544444421 344567788888889999999999998765 699999998887777654333332333221
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh---CCCccchhhHh
Q 021674 84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL---HFNLTESGLFC 160 (309)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~---g~s~~~~g~~~ 160 (309)
++ + .++ ..+.++++.+..+.++++|||++|......++....+.....|.|.|+++.. +.+..+.|...
T Consensus 189 ~~-~----~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~ 260 (396)
T TIGR00882 189 SA-T----VAN---ALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVT 260 (396)
T ss_pred hh-h----hhc---ccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHH
Confidence 11 0 000 0000111111234678899999887666655555555566678999998765 45556678888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHH-HHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-ACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 239 (309)
....+...++....|++.||+++|+... .+..............++++...... ..+.+. +........
T Consensus 261 ~~~~i~~~~~~~~~g~l~~r~g~~~~l~---------~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~ 330 (396)
T TIGR00882 261 TMGELLNALIMFCAPLIINRIGAKNALL---------IAGTIMSVRIIGSSFATTALEVVILKMLHAFEV-PFLLVGCFK 330 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHH---------HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 8888888889999999999999774211 11111111111112233444332222 112211 111111111
Q ss_pred h-hhccCCCchHHHHHH-HhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674 240 N-HQDIAPRYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 240 ~-~~~~~~~~~g~a~~~-~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
. ....+++.++++.+. .|....+|++++|.+.|++.|..||+..|.+.+++.++..++-.
T Consensus 331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 1 222345555655544 57888999999999999999988899999988888777765543
No 76
>PRK10054 putative transporter; Provisional
Probab=99.82 E-value=1.2e-18 Score=160.38 Aligned_cols=264 Identities=12% Similarity=0.074 Sum_probs=161.1
Q ss_pred ccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCC
Q 021674 4 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 83 (309)
Q Consensus 4 g~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~ 83 (309)
+.+...|.......|.+|+++|+++.|+.+...++|.++++++++++.+ .|||.+|++.+++.++..+......+|+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 187 (395)
T PRK10054 109 AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK 187 (395)
T ss_pred HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3445567788888999999999999999999999999999999998875 799999998776665543322222332211
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh--CCCccchhhHhh
Q 021674 84 EDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL--HFNLTESGLFCV 161 (309)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~--g~s~~~~g~~~~ 161 (309)
+++ ++++ + ..+.++++|||++|......++.......+..|.+.|+.+.. +.+....+.+..
T Consensus 188 ~~~----~~~~--------~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 251 (395)
T PRK10054 188 AIA----TETG--------S----VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLP 251 (395)
T ss_pred ccc----cchh--------h----hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHH
Confidence 110 0000 0 011256788999888777777766666677789999987543 444455566666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc-cCchH-HHHHHHHHHHhhhhhhhcchhh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPA-MAVLCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
...+.........|++.||.++|+. + ..++............ .++.. +.+.....+.+... ..+....
T Consensus 252 ~~~~~~~~~~~~~g~~~~~~~~~~~--------l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~p~~~~ 321 (395)
T PRK10054 252 VNAAMVVSLQYSVGRRLNAANIRPL--------M-TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEII-YAPGEYM 321 (395)
T ss_pred hhhhheeeehhHHHHHHccCCchhH--------H-HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHH-HHhhHHH
Confidence 6666666666788889998765531 1 1111111111111111 12222 21222222222111 1112222
Q ss_pred hhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674 240 NHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 240 ~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 295 (309)
...+ .+++.++...+..+ ...+|..+||.+.|.+.|+.+....|.+.+.+..++-
T Consensus 322 ~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 322 LIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAW 377 (395)
T ss_pred HHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence 2222 34567788887655 5778999999999999999888777776555544333
No 77
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=3e-18 Score=158.32 Aligned_cols=268 Identities=13% Similarity=0.100 Sum_probs=165.2
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh--------------------------hc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--------------------------RF 54 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~--------------------------~~ 54 (309)
+|+|.|...+....++.+..|+|+|++.+++.+...++|..+++.+++.+.. ..
T Consensus 104 ~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (410)
T TIGR00885 104 LTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLA 183 (410)
T ss_pred HHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHH
Confidence 3778888899999999999999999999999999999999999999887743 24
Q ss_pred CCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHH
Q 021674 55 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT 134 (309)
Q Consensus 55 gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 134 (309)
+||++|.+.+.+.++..+++.+ .+ .|+.++ ++++ +++ ...+.++++|+|+++...+..++.....
T Consensus 184 ~w~~~fl~~a~~~~~~~~~~~~-~~-~p~~~~--~~~~----------~~~-~~~~~~~~~~~~~~~~~~l~~f~yvg~e 248 (410)
T TIGR00885 184 SVQTPYMIIGAVVLAVALLIML-TK-MPALNH--SDAK----------QIS-FSASLSRLARIRHYREGVIAQFFYVGVQ 248 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hc-CCCCCc--cccc----------ccc-chhhHHHHHhChhHHHHHHHHHHHHHHH
Confidence 7999999888877654333322 11 121110 0000 000 0113456789998888777777765566
Q ss_pred HHHHHhHHHHHHHHh-CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc
Q 021674 135 FILLTWMPTYYNQVL-HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV 213 (309)
Q Consensus 135 ~~~~~wlp~~l~~~~-g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (309)
.+..+|+|.|+++.. +.+...++.+......+..+|.++++++.||.++|+ .+..... ....+.......
T Consensus 249 ~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~--------~l~i~~~-~~~~~~ll~~~~ 319 (410)
T TIGR00885 249 IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK--------VLMAYAI-IGMALCLGSIFA 319 (410)
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--------HHHHHHH-HHHHHHHHHHHc
Confidence 678899999997532 334344455566666788999999999999997663 1211111 111111111122
Q ss_pred CchHHHHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC------CchHHHHHH
Q 021674 214 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG------SWDDVFKVS 287 (309)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~------~~~~~~~~~ 287 (309)
+.......+..+++... ...+..++...+.-+++...+.+...+. -+|+++.|.+.|.+.|+. +++..|.+.
T Consensus 320 ~~~~~~~~l~~~glf~s-~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~ 397 (410)
T TIGR00885 320 GGHVGLYCLTLCSAFMS-LMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILP 397 (410)
T ss_pred CChHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHH
Confidence 22222222222222221 1123344433333333333333333332 389999999999999952 577888877
Q ss_pred HHHHHHH
Q 021674 288 VGLYLVG 294 (309)
Q Consensus 288 ~~~~~~~ 294 (309)
..|++..
T Consensus 398 ~~~~~~~ 404 (410)
T TIGR00885 398 LLCFAVI 404 (410)
T ss_pred HHHHHHH
Confidence 7776544
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.81 E-value=1.5e-18 Score=179.43 Aligned_cols=273 Identities=19% Similarity=0.148 Sum_probs=170.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh--------c-CCcchhHhhhhHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------F-GWPSVFYSFGSLGTVWF 71 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~--------~-gWr~~F~i~~~~~~v~~ 71 (309)
+|++.|...|+..++++|++|++||++++|+...+.++|.++|+.+++++.+. + +|++.+.+..+...+..
T Consensus 113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1146)
T PRK08633 113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLG 192 (1146)
T ss_pred HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHH
Confidence 47888999999999999999999999999999999999999999999999886 3 45555544333322222
Q ss_pred HHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 021674 72 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 151 (309)
Q Consensus 72 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~ 151 (309)
++.....++.|+..+...+.++. .........++.++++|.++...+..++.....+...+++|.|+++.+|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 265 (1146)
T PRK08633 193 LIFAYRLPKVPAAAPEVFDKKKY-------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGL 265 (1146)
T ss_pred HHHHhcCcCCCCCCccccccccc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC
Confidence 22222334443322111000000 00000012356678888888776666666666777889999999999999
Q ss_pred Ccc-chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhh
Q 021674 152 NLT-ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGT 229 (309)
Q Consensus 152 s~~-~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (309)
+.. +.+++.....++..++.++.|+++||.++++... ++.++.++....+....+.... +.++..+++.
T Consensus 266 s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 266 DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVP---------LGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchh---------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 998 9999999999999999999999999987654221 1111111111111111222222 2222222222
Q ss_pred hhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHH
Q 021674 230 DAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGL 290 (309)
Q Consensus 230 ~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~ 290 (309)
+.. .....+... ..+++.+|.+.++.|++.++++.+++.+.+.+... .++...+.+.+.+
T Consensus 337 ~~~-~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 337 GLF-IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHh-hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 211 122223333 34567899999999999999988887776665443 2344445444433
No 79
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.80 E-value=1.9e-18 Score=160.60 Aligned_cols=250 Identities=13% Similarity=0.109 Sum_probs=152.4
Q ss_pred hhhHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-------hcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 9 MPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 9 ~p~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-------~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
.+...++..|.. |++||++..++.+.+.++|.+++..+.+.+.. ..|||+.|.+.+++.++......+..+|
T Consensus 117 ~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e 196 (437)
T TIGR00792 117 NIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKE 196 (437)
T ss_pred cccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 334456677777 67999999999999989988887766655542 4689999998888877665444444454
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHh
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 160 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~ 160 (309)
+++++++ ++ +++.+ -...+++++|||+++......++...+.+....+.|.|++...+ +..+.+.+.
T Consensus 197 ~~~~~~~----~~-------~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 263 (437)
T TIGR00792 197 RYSEIPK----NI-------EKKLS-LKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMG 263 (437)
T ss_pred cCCCCCc----cc-------ccCCC-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHH
Confidence 4321110 00 00000 01135678899999888777777766666666677777765555 455666677
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674 161 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (309)
....++..++.++.++++||+++|+.. ................ ..++..... .....+++.+.. ....++
T Consensus 264 ~~~~i~~ii~~~~~~~l~~r~g~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~-~~~~~~ 334 (437)
T TIGR00792 264 SIAIVAGLIGVLLFPRLVKKFGRKILF-------AGGILLMVLGYLIFFF-AGSNLPLILVLIILAGFGQNFV-TGLVWA 334 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHH-------HHHHHHHHHHHHHHHH-cchhHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 777889999999999999999876321 1111111111111111 112222222 222222222211 111111
Q ss_pred hhhc--------cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 240 NHQD--------IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 240 ~~~~--------~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
...| ..++..|.+.|+.|+..++++.+++.+.|.++|..||
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1111 2345689999999999999999999999999886444
No 80
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.79 E-value=1.1e-18 Score=169.01 Aligned_cols=184 Identities=15% Similarity=0.225 Sum_probs=136.7
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc----------------------CCcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF----------------------GWPS 58 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~----------------------gWr~ 58 (309)
||+|++..++...+++.||+|+++|+++++++.++..+|.++|+.+++++.+.+ +||.
T Consensus 182 ~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl 261 (633)
T TIGR00805 182 RGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI 261 (633)
T ss_pred HhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH
Confidence 699999999999999999999999999999999999999999999999988654 2677
Q ss_pred hhHhhhhHHHHHHHHHHhhcccCCCCCC--CCCHHHHHHHHh-ccCC-CC---CCC--CCChhHhhcchHHHHHHHHHHH
Q 021674 59 VFYSFGSLGTVWFTVWLSKAHSSPAEDP--QLRPAEKKLIVS-SCAS-KE---PVK--TIPWGLILSKPPVWALIVSHFC 129 (309)
Q Consensus 59 ~F~i~~~~~~v~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~-~~~~-~~---~~~--~~~~~~l~~~~~~~~~~~~~~~ 129 (309)
.|++.++++++..+.++...++.|++.. +.+.++++...+ +... ++ ..+ ...+++++|||.++...+..++
T Consensus 262 ~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~ 341 (633)
T TIGR00805 262 GFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVI 341 (633)
T ss_pred HHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 7888888777654433332223332211 111111100000 0000 00 000 1135678999999999888888
Q ss_pred HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHHHHHHHHHHHHHHHHHc
Q 021674 130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~G~l~dr~~~r 184 (309)
.....+++.+|+|.|+++.+|+++.+++++..+..+ ++.++.+++|+++||++.+
T Consensus 342 ~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 342 DSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 888999999999999999999999999999887766 5789999999999999754
No 81
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.8e-18 Score=155.40 Aligned_cols=271 Identities=15% Similarity=0.149 Sum_probs=162.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcC-CcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~g-Wr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
.|+||+...|.+.++++|.||.++|++.+++++...++|+.+|.+.+..+..+.+ |||.|+..+++++++.++.....+
T Consensus 131 vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 131 VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 4899999999999999999999999999999999999999999999999988766 999999999999887665554444
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCC-CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---hCCCccc
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEP-VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV---LHFNLTE 155 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~---~g~s~~~ 155 (309)
| |++. +.|+.. .+.+..++. ..-.+.+.+.|+|......+.+.......-++..|.|.+++.. .|++..+
T Consensus 211 e-P~rg----a~~~~~-~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~ 284 (493)
T KOG1330|consen 211 E-PERG----ARDEVD-GENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNA 284 (493)
T ss_pred C-cccc----cccccc-cCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCcccc
Confidence 3 3321 111100 000000000 0011234455666655445555554444555667888887644 3445445
Q ss_pred hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHH--HHHHhhHHHHHHHHHhhccCchHHH--HHHHHHHHhhhh
Q 021674 156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKI--MQSIGFLGPAFFLTQLSHVDSPAMA--VLCMACSQGTDA 231 (309)
Q Consensus 156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 231 (309)
...+..+...++.+|.+++|.++||+-++..+....+.- ....+..+.+.++..........+. ++++..+.....
T Consensus 285 ~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~ 364 (493)
T KOG1330|consen 285 TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISW 364 (493)
T ss_pred chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 555556777889999999999999987644432221111 1111111122222211111112121 222222211111
Q ss_pred hhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhh-HHHhHHHhhccc
Q 021674 232 FSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGV-FGTAATGYILQH 277 (309)
Q Consensus 232 ~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~-i~~~~~g~l~~~ 277 (309)
.+.+..... .+-.+|+.|.++.++--....+.|- -+|+++|.+-|+
T Consensus 365 ~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 365 FNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred cccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 111111111 2335788999999887777766554 556699999987
No 82
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.76 E-value=2.7e-17 Score=154.71 Aligned_cols=290 Identities=17% Similarity=0.252 Sum_probs=197.0
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|+|.|..+..+..++.+||+ |||+++.|+..++.++|..+=+++..++.+.+|||+.+++.+.+.+-.........|..
T Consensus 146 G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~ 224 (509)
T KOG2504|consen 146 GLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLS 224 (509)
T ss_pred hccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88999999999999999988 77999999999999999999999999999999999999998876654433333333322
Q ss_pred CCCCCC-----------------------------CCH----HHHHHHHhccCCC-CCCCCCCh---hHhhcchHHHHHH
Q 021674 82 PAEDPQ-----------------------------LRP----AEKKLIVSSCASK-EPVKTIPW---GLILSKPPVWALI 124 (309)
Q Consensus 82 p~~~~~-----------------------------~~~----~~~~~~~~~~~~~-~~~~~~~~---~~l~~~~~~~~~~ 124 (309)
++..+. ..+ ++....+.+++.. .+.+.... .+++|+|.++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~ 304 (509)
T KOG2504|consen 225 PPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLA 304 (509)
T ss_pred cCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHH
Confidence 221111 000 0000000000000 01011111 4688999999988
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674 125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 204 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~ 204 (309)
....+...+++....++|.|.. .+|++..++..+++..++...++.++.|+++||...++.. +..++++...
T Consensus 305 ~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~-------~~~~~ll~~g 376 (509)
T KOG2504|consen 305 LSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV-------LFLLTLLIAG 376 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH-------HHHHHHHHHH
Confidence 8888888899999999999998 6899999999999999999999999999999997643221 2222222222
Q ss_pred HHHHHhhccCch-HHHHHHHHHHHhhhhhhhcchhh-hhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCc
Q 021674 205 FFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYS-NHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSW 280 (309)
Q Consensus 205 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~ 280 (309)
+........++. .....+...++..+.+. .+.. ...| ...+.-..+.|+......++..++|++.|++.|. ++|
T Consensus 377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~--~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y 454 (509)
T KOG2504|consen 377 LARLFLPFATTYVGLIVFSILFGFCVGSFS--SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY 454 (509)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCe
Confidence 222222222232 22333444444333322 1111 1223 3456678889999999999999999999999998 559
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc
Q 021674 281 DDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
...|.....+.+++...+.+..
T Consensus 455 ~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 455 DHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeehhhcChHHHHHHHHHHHhH
Confidence 9888888888887776665554
No 83
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.75 E-value=2.5e-16 Score=148.72 Aligned_cols=282 Identities=18% Similarity=0.187 Sum_probs=184.1
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|++.+...|+-.+++.+.+|++|..+++++.+...+++-++||.++|.++..+|=.+.|.++++.-++. +..+...+.+
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~-i~~l~~~~~~ 192 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLIS-ILALLRWKPP 192 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcccc
Confidence 566778889999999999999999999999999999999999999999999999899999876533332 2222222221
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
+++ ++. +.|+ . . ++- +.-++.+.++|.+.......++.+.....+..-+|.+.++.+|.++..-|+++.
T Consensus 193 ~~~-~~~-~~e~-~-~-----~~l--~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a 261 (524)
T PF05977_consen 193 PPP-SSL-PRER-F-F-----SAL--REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLA 261 (524)
T ss_pred ccc-ccc-chhh-h-h-----hhH--HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHH
Confidence 111 111 1111 0 0 000 112455667777766555555555555556677999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHH-HHHhhhhhhhcchhhh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSN 240 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 240 (309)
..++++.+|+++.+++.+|+.+++. + ..+.+..++....+...++.+.....++ .+++.. .........
T Consensus 262 ~~gvGai~Gal~~~~l~~~~~~~~l--------v-~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~-~~~~~~~t~ 331 (524)
T PF05977_consen 262 AFGVGAILGALLLPRLRRRLSSRRL--------V-LLASLLFALALLLLALSPSFWLALIALFLAGAAWI-IANSSLNTL 331 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccCcchh--------h-HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 8888888888888887777654321 1 1122222222222333334433333222 222211 222222233
Q ss_pred hh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674 241 HQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGE 305 (309)
Q Consensus 241 ~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (309)
.+ ..+++.+|.+.++.++..+.+..+|..+.|.+.|+.+....+.+++++.+++.++...+.-++
T Consensus 332 ~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~ 397 (524)
T PF05977_consen 332 VQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQ 397 (524)
T ss_pred HHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 33 345578999999999999999999999999999998787777777766666665555553333
No 84
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.72 E-value=2.3e-15 Score=141.67 Aligned_cols=297 Identities=15% Similarity=0.091 Sum_probs=165.2
Q ss_pred CCcccccchhhHHHHHhccCCCcc---hhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHH--
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAE---RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL-- 75 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~---rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~-- 75 (309)
+|+|.|...|+..+++++++|++| |+++.++.+.+.++|..+|+++++++.+++|||+.|.+.++..++..+.++
T Consensus 112 ~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 112 IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHc
Confidence 378889999999999999998765 899999999999999999999999999999999999986643322211211
Q ss_pred hh-cccCCCCCCCCCHHHHHHHH-------------------hcc--------------------CCCCCCCCCChhHhh
Q 021674 76 SK-AHSSPAEDPQLRPAEKKLIV-------------------SSC--------------------ASKEPVKTIPWGLIL 115 (309)
Q Consensus 76 ~~-~~~~p~~~~~~~~~~~~~~~-------------------~~~--------------------~~~~~~~~~~~~~l~ 115 (309)
++ .++.|+++++.++++++... .+. ...++ ..+..+-.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 269 (475)
T TIGR00924 192 RHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP--RLDAVARN 269 (475)
T ss_pred ccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc--cCCHHHHh
Confidence 11 12222221112211111000 000 00000 00111111
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccc----hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674 116 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV 191 (309)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~----~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~ 191 (309)
|......+.....+....+....+-+|.|.++..+.+... .+.+.++..+...+..++..++-.|..||+......
T Consensus 270 ~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~ 349 (475)
T TIGR00924 270 KMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTP 349 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcH
Confidence 1122222233333333333444566788877665554333 678888888888888877777777777653322211
Q ss_pred HHHHHHHhhHHHHHH--HHHh----h---ccCchHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhH
Q 021674 192 RKIMQSIGFLGPAFF--LTQL----S---HVDSPAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAG 260 (309)
Q Consensus 192 ~~~~~~~~~~~~~~~--~~~~----~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~ 260 (309)
.|. .++++...+. .... . ...+.++.+.. ...+.+-. +..+..++.. +..+++.+|...|+.+...
T Consensus 350 ~k~--~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~-~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~ 426 (475)
T TIGR00924 350 LKF--TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGEL-MISPLGLSWWTKIAPQRLMGQMLGMWFLAQ 426 (475)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 121 1222221111 1111 0 11233333322 22222211 1122222222 3345578999999999988
Q ss_pred hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 261 VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 261 ~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
.+|..+++.+.....+..++...|...+.+.++..++..+..
T Consensus 427 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 427 AMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 889999988888777776788777776666665555554443
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.72 E-value=2.4e-15 Score=141.84 Aligned_cols=297 Identities=17% Similarity=0.187 Sum_probs=158.0
Q ss_pred CCcccccchhhHHHHHhccCCCc--chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHH---
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL--- 75 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~--~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~--- 75 (309)
||+|+|...|...++++|+||++ ||+++.++++.+.++|+.+|+.+++++.+++|||+.|++.++ +++..++.+
T Consensus 115 ~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~ 193 (489)
T PRK10207 115 IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFAC 193 (489)
T ss_pred HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHc
Confidence 58899999999999999999877 558899999999999999999999999999999999998543 333222111
Q ss_pred hhc-ccCCCCCCCC-CHHHHHHH------------HhccCCC-CCC-----------------CCCChhHhhcchHHHHH
Q 021674 76 SKA-HSSPAEDPQL-RPAEKKLI------------VSSCASK-EPV-----------------KTIPWGLILSKPPVWAL 123 (309)
Q Consensus 76 ~~~-~~~p~~~~~~-~~~~~~~~------------~~~~~~~-~~~-----------------~~~~~~~l~~~~~~~~~ 123 (309)
++. ++.++ +|+. +.+.+... .....++ .+. +..+..+++|+|.+...
T Consensus 194 ~~~~~~~~~-~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~ 272 (489)
T PRK10207 194 RGMVKDIGS-EPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAF 272 (489)
T ss_pred chhhcccCC-CCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 111 11110 1110 01100000 0000000 000 00000134566554433
Q ss_pred H-HHHHHHHHHHHH-HHHhHHHHHHHHhCCCcc----chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 124 I-VSHFCHNWGTFI-LLTWMPTYYNQVLHFNLT----ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 124 ~-~~~~~~~~~~~~-~~~wlp~~l~~~~g~s~~----~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
. .......+..|. ..+-+|.|.++..+.+.. ....+.++..+...+.+++.+++.||+++|+.......+....
T Consensus 273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G 352 (489)
T PRK10207 273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLG 352 (489)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHH
Confidence 2 222333344333 447788888753333211 2344444555677788889999999999886432222222111
Q ss_pred HhhHHHHHHH-----HHhhcc---CchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHH
Q 021674 198 IGFLGPAFFL-----TQLSHV---DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGT 268 (309)
Q Consensus 198 ~~~~~~~~~~-----~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~ 268 (309)
..+....+.. ...... .+.++.+. ....+.+-......+.-......+++.+|.++|+.+...++|+.++.
T Consensus 353 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~ 432 (489)
T PRK10207 353 MFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGG 432 (489)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111110 011111 12233222 22222222212111122223445667899999999999999999998
Q ss_pred hHHHhhcc------c----CCchHHHHHHHHHHHHHHHHHH
Q 021674 269 AATGYILQ------H----GSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 269 ~~~g~l~~------~----~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
.+...... . ..+...|...++..+++.+++.
T Consensus 433 ~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~ 473 (489)
T PRK10207 433 YVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMA 473 (489)
T ss_pred HHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88765521 1 1245566655555544444433
No 86
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.67 E-value=1.3e-14 Score=134.61 Aligned_cols=249 Identities=9% Similarity=0.076 Sum_probs=142.3
Q ss_pred cchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCC
Q 021674 23 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCAS 102 (309)
Q Consensus 23 ~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 102 (309)
..|.|..| ++|.++|+.+++.+....+|+. |++.+++.++..++ ....+|+|+.+++.+.+.+
T Consensus 132 ~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~--------- 194 (418)
T TIGR00889 132 FPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIK--------- 194 (418)
T ss_pred CCCeeeeh------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHH-HhcCCCCCCCccccccCHH---------
Confidence 34555555 3677888888887744444654 55556555543322 3344554322111000000
Q ss_pred CCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCc--------cchhhHhhhhHHHHHHHHHHH
Q 021674 103 KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL--------TESGLFCVLPWLTMAFSANLG 174 (309)
Q Consensus 103 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~--------~~~g~~~~~~~~~~~ig~~~~ 174 (309)
+. ...+.++++|+|+++......++..........+.|.|+++ .|.++ .+.+...+...+...++.+..
T Consensus 195 -~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~ 271 (418)
T TIGR00889 195 -VM-LGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTI 271 (418)
T ss_pred -HH-hhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 00 01134567899988877767666655555666888999875 46543 566888888888999999999
Q ss_pred HHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhhccCc--hHHHH-HHHHHHHhhhhhhhcchhhhhh-ccCCCc
Q 021674 175 GWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLSHVDS--PAMAV-LCMACSQGTDAFSQSGLYSNHQ-DIAPRY 248 (309)
Q Consensus 175 G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 248 (309)
|+++||+++|+. +. .+.+...+. .......+. ..... .....+.+.+.. ......... ..+++.
T Consensus 272 g~l~dr~g~r~~--------l~-~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~-~~~~~~~i~~~~p~~~ 341 (418)
T TIGR00889 272 PFFLKRFGIKKV--------ML-LSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFF-NISGSVFVEKEVPVHI 341 (418)
T ss_pred HHHHHHhCcHHH--------HH-HHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHH
Confidence 999999987631 11 112111111 111111111 11111 111122221111 111112222 345578
Q ss_pred hHHHHHHHh-HhHhhhhhHHHhHHHhhccc------CCchHHHHHHHHHHHHHHHHHHhh
Q 021674 249 SGVLLGLSN-TAGVLAGVFGTAATGYILQH------GSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 249 ~g~a~~~~~-~~~~lgg~i~~~~~g~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
++.+.++.+ ....+|+.++|.+.|.+.|+ .+|+..|.+.+++.+++.+.+.++
T Consensus 342 ~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~ 401 (418)
T TIGR00889 342 RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIF 401 (418)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999997 55678999999999999987 258888888777766665555554
No 87
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.65 E-value=1.6e-15 Score=133.89 Aligned_cols=275 Identities=17% Similarity=0.148 Sum_probs=176.9
Q ss_pred CCcccccchhhHHHHHhccCCCc-chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVA-ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~-~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
||+|.+....+..+++++.||++ ||++++|+...+.++|.++||+.||.+-|..|-+..|.+++.+.++-..+-+...+
T Consensus 169 QgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 169 QGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 89999999999999999999855 57999999999999999999999999999999999999999888765444333222
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc-chhh
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT-ESGL 158 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~-~~g~ 158 (309)
|.+.++ ++..+..++++++++|..+.........+...-.+---+|.+..+... ++. +.|+
T Consensus 249 --p~~~~~---------------~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~-~p~w~~G~ 310 (464)
T KOG3764|consen 249 --PTEMDP---------------DSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMF-TPGWEVGL 310 (464)
T ss_pred --ccccCc---------------cccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhcc-CCCcceee
Confidence 211110 001113467889999998876655444444443444556677777777 455 9999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcch
Q 021674 159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGL 237 (309)
Q Consensus 159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (309)
...+..+.-.++..+.|.++||++..++.. ...+++....+.......++....++ -...+++.. ...+.+
T Consensus 311 ~fLp~~~~y~ig~~lfg~la~k~~~~~wl~-------~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~-~~dasl 382 (464)
T KOG3764|consen 311 AFLPASLSYAIGTNLFGKLADKYPHLRWLL-------SLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIG-LADASL 382 (464)
T ss_pred eecccccchhccCchHHHHHHhcCchhHHH-------HHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHH-HHHHHH
Confidence 999999999999999999999998543211 11111111111111111112111111 111111111 111111
Q ss_pred ---hhhhhcc----CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 238 ---YSNHQDI----APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 238 ---~~~~~~~----~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
....-|. .-+.-|...++......+|-++||.++|.+.+.-|+.+.....+...++-+-+..+.
T Consensus 383 ~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 383 IPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred hhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 112458888899999999999999999999999777766655555555544333333
No 88
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.63 E-value=2.3e-13 Score=127.36 Aligned_cols=288 Identities=18% Similarity=0.184 Sum_probs=184.5
Q ss_pred hhHHHHHhccCCCcch--------------------------hHHHHHHHhhhhhHHHHhhhhHHHHhhhcC--------
Q 021674 10 PAMNNILSKWVPVAER--------------------------SRSLALVYSGMYLGSVTGLAFSPFLIHRFG-------- 55 (309)
Q Consensus 10 p~~~~~i~~~~p~~~r--------------------------g~~~g~~~~~~~~g~~lg~~l~~~l~~~~g-------- 55 (309)
.--.+++.+..+++++ ++..+.=.+..++|+++...+.-.+....+
T Consensus 145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~ 224 (477)
T PF11700_consen 145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWA 224 (477)
T ss_pred HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchh
Confidence 3445677888888877 999999999999999888777655543322
Q ss_pred CcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHH
Q 021674 56 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 135 (309)
Q Consensus 56 Wr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 135 (309)
=|..+.+.++--+++.+.+++..||+|+.++. ++.++ .....- ++. ...++++.|+|.+....+.+++.+-+..
T Consensus 225 ~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~-~~~~~-~~~~g~--~~l--~~t~k~~~~~~~~~~fLia~~l~~dg~~ 298 (477)
T PF11700_consen 225 IRVAFLIVALWWLVFSIPLFLWLPDRPGPRPL-PSGSS-YLRFGF--KRL--WRTFKEIRKLRQLFLFLIAYFLYSDGVN 298 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC-Ccchh-HHHHHH--HHH--HHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 36666665655444444455555665541111 11110 000000 000 1124566677888887888888888899
Q ss_pred HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh----
Q 021674 136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS---- 211 (309)
Q Consensus 136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 211 (309)
.+......|.++++|+|..+...+.....+.+.+|+.+.|++.||+|.|++.. .+..............++
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~-----l~~~l~~~~~i~~~g~~G~~~~ 373 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT-----LLISLILWIIIPLYGLFGFWPS 373 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH-----HHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999773211 111111110111111110
Q ss_pred --ccCchHH-HHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHH
Q 021674 212 --HVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKV 286 (309)
Q Consensus 212 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~ 286 (309)
..++++. .++....+...+.. ++..-+...+ .|+++.+.-.|+.+..++..+.+||.+.|.+.|. ++.+..+..
T Consensus 374 ~~g~~~~~~f~~~a~~~G~~~G~~-qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~ 452 (477)
T PF11700_consen 374 FFGLKSPWEFWVLAVLIGLFMGGI-QSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLF 452 (477)
T ss_pred ccCcccHHHHHHHHHHHHHHhhhH-HHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 0122222 22222222222221 1111111223 4566789999999999999999999999999998 568888888
Q ss_pred HHHHHHHHHHHHHhhcCCccccC
Q 021674 287 SVGLYLVGTAVWNLFSTGEKVVD 309 (309)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~ 309 (309)
..++.+++.++......+|+.+|
T Consensus 453 l~~lf~~gl~ll~~v~~~~g~~~ 475 (477)
T PF11700_consen 453 LLVLFLIGLILLFFVDVEKGRED 475 (477)
T ss_pred HHHHHHHHHHHHhhccchhhhhc
Confidence 88888888888877777777665
No 89
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.61 E-value=1.7e-13 Score=121.79 Aligned_cols=274 Identities=13% Similarity=0.129 Sum_probs=175.4
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-------------------cCCcchhHh
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------------------FGWPSVFYS 62 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-------------------~gWr~~F~i 62 (309)
|.|.|..-.++..+++...|+++-.+.+.+....+++|++++|++++.++.+ -.||++|.+
T Consensus 115 a~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~ 194 (422)
T COG0738 115 ASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLI 194 (422)
T ss_pred HhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHH
Confidence 4567777788899999999999999999999999999999999999998872 258888887
Q ss_pred hhhHHHHHHHH-HHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhH
Q 021674 63 FGSLGTVWFTV-WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 141 (309)
Q Consensus 63 ~~~~~~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wl 141 (309)
.+..-++..+. .+.+.|+.++++++ +.++ ++....+++|+|..+...+..|+..-.--+..+|+
T Consensus 195 ~~~~lvll~v~~~~~k~p~~~~~~~~--------------~~~~-~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl 259 (422)
T COG0738 195 LAGLLVLLAVLILLSKLPDLQVAAPS--------------LGAS-GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL 259 (422)
T ss_pred HHHHHHHHHHHHHhccCCcCCccccc--------------cccc-ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 65544333222 22222222111111 0011 01134678999999888888887766678888999
Q ss_pred HHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH
Q 021674 142 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL 221 (309)
Q Consensus 142 p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (309)
|+|+.+.+|++..++...++....+..+|..++.++..|+... |.+...+.+...++.. ....++......
T Consensus 260 ~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--------k~Laf~a~~~ill~~~-~~l~~g~v~~~~ 330 (422)
T COG0738 260 VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--------KYLAFYALIAILLLLA-VALIGGVVALYA 330 (422)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHHHHHHHHHHHHHHH-HHHhcChHHHHH
Confidence 9999998999999999999999999999999999999888653 2232222222222211 122233222222
Q ss_pred HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHH-HHHHHHHHHHHHHHh
Q 021674 222 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK-VSVGLYLVGTAVWNL 300 (309)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~~~~~ 300 (309)
..+++...+ ...+..++...+.-+++...++++ -....+||++-|++.|++.|+.+....+. +...|++.. +.+.+
T Consensus 331 l~~ig~F~s-imfPTIfslal~~l~~~ts~~s~~-l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV-~~~~~ 407 (422)
T COG0738 331 LFLIGLFNS-IMFPTIFSLALKNLGEHTSVGSGL-LVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV-LFFAL 407 (422)
T ss_pred HHHHHHHhH-HHHHHHHHHHHhccCcccccccee-eeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH-HHHHH
Confidence 233332211 122333333232333444444443 33467899999999999999965554444 445555433 55556
Q ss_pred hc
Q 021674 301 FS 302 (309)
Q Consensus 301 ~~ 302 (309)
+.
T Consensus 408 ~~ 409 (422)
T COG0738 408 IG 409 (422)
T ss_pred Hh
Confidence 65
No 90
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.61 E-value=1.3e-13 Score=127.68 Aligned_cols=186 Identities=16% Similarity=0.149 Sum_probs=129.0
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHH--HHhhhcCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP--FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~--~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
|+..|.......-++.|-.|++.||....+...+..+|..++..++. .+.+.-.|++.+....+++++.. +.+...|
T Consensus 127 Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~P 205 (485)
T KOG0569|consen 127 GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLP 205 (485)
T ss_pred HHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCC
Confidence 66777788888889999999999999999999999999999976653 34456679999998888777654 4455679
Q ss_pred cCCCCC--CCCCHHHHHHH-----------------Hhc--cCCCCCCCCCChhHhhcchHHHHHHHH----HHHH-HHH
Q 021674 80 SSPAED--PQLRPAEKKLI-----------------VSS--CASKEPVKTIPWGLILSKPPVWALIVS----HFCH-NWG 133 (309)
Q Consensus 80 ~~p~~~--~~~~~~~~~~~-----------------~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~-~~~ 133 (309)
|+|+.. .+.+++|.+.. .++ ..+.++.++.++++++|||..+.-... .++. ..+
T Consensus 206 ESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sG 285 (485)
T KOG0569|consen 206 ESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSG 285 (485)
T ss_pred CCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcC
Confidence 999731 11122211100 000 011112245678899998876653222 2222 223
Q ss_pred HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChh
Q 021674 134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVT 189 (309)
Q Consensus 134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~ 189 (309)
.+....|...++++ -|++..++-......++...+.++++.++.||.|||++.+.
T Consensus 286 i~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~ 340 (485)
T KOG0569|consen 286 INAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLI 340 (485)
T ss_pred cceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 44555666556654 69999999999999999999999999999999998865544
No 91
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.55 E-value=7.1e-13 Score=123.26 Aligned_cols=248 Identities=17% Similarity=0.231 Sum_probs=156.4
Q ss_pred hhHHHHHhccCC-CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------CCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 10 PAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 10 p~~~~~i~~~~p-~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
..-.++..|..+ ++||.+..+.-.....+|..+...+.+.+.+.+ +||+...+.+++.++...+.....+|+
T Consensus 122 i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~ 201 (428)
T PF13347_consen 122 IPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKER 201 (428)
T ss_pred CchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeec
Confidence 344567888886 689999999999999999976666666555432 599999988887776655555455551
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 82 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 82 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
+++. ++++ ++.+ -...++.++|||+++.+....++...+.....+..+.|.+...|.+ ...+.+..
T Consensus 202 ~~~~---~~~~---------~~~~-~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~ 267 (428)
T PF13347_consen 202 SVEV---TEQE---------KKIS-LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFML 267 (428)
T ss_pred cccc---cccc---------cccc-cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHH
Confidence 1111 0000 0101 1224678899999998888888877777777778888888888887 45566666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh--hcchh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS--QSGLY 238 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~ 238 (309)
...++..++.++.++++||+|+|+..... ....+........... ++.... +.....+.+.+... ...+.
T Consensus 268 ~~~~~~~v~~~~~~~l~~r~gk~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~gi~~~~~~~~~~a~~ 340 (428)
T PF13347_consen 268 IFFVASIVGSPLWGRLSKRFGKKKVYIIG------LLLAALGFLLLFFLGP-GSPWLVLILFILAGIGYGAFFVIPWAML 340 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHccceeehhhh------HHHHHHHHHHHHHHHh-hhHHHHHHHHHHhHhhhccccccccccc
Confidence 77889999999999999999987533211 0111111111111111 233322 22222333322221 11122
Q ss_pred hhhhc-----cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674 239 SNHQD-----IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 278 (309)
Q Consensus 239 ~~~~~-----~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~ 278 (309)
+...| ...+..|.-.++.+....++..+++.+.|.+++..
T Consensus 341 ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 341 ADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred ccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 22111 12345799999999999999999999999998763
No 92
>PRK09669 putative symporter YagG; Provisional
Probab=99.55 E-value=7.8e-13 Score=123.58 Aligned_cols=247 Identities=14% Similarity=0.116 Sum_probs=134.5
Q ss_pred hHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-------hcCCcchhHhhhhHHHHHHHHHHhhcccCC
Q 021674 11 AMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 82 (309)
Q Consensus 11 ~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-------~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p 82 (309)
.-.++.+|+. +++||.+..++-....++|..+++.+...+.. ..|||..+.+.+++.++.....+...+|++
T Consensus 129 p~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~ 208 (444)
T PRK09669 129 PYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERY 208 (444)
T ss_pred hHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEec
Confidence 3446788888 67999999888888888887777655444333 347888888888777665433333334322
Q ss_pred CCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674 83 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL 162 (309)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~ 162 (309)
+.+ + + ++ +....++++++|||+++.+....++...+...... +..|+.+..--+....+.+...
T Consensus 209 ~~~-~----~---------~~-~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~ 272 (444)
T PRK09669 209 TPE-V----D---------NS-SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLLRPDLATLFLVT 272 (444)
T ss_pred CCC-C----c---------CC-CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh-hhheeeeeecCCHHHHHHHHHH
Confidence 110 0 0 00 00012356788999988877666655444433333 3344433211122233444445
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhh--hcchhh
Q 021674 163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFS--QSGLYS 239 (309)
Q Consensus 163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~ 239 (309)
..+...++.++.++++||+++|+.... ............. ....++.... +.....+.+.+... ...+.+
T Consensus 273 ~~i~~ii~~~~~~~l~~r~gk~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 273 GMIAGLFGALLSERLLGKFDRVRAFKW------TIVAFVILSALIF-FIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHH------HHHHHHHHHHHHH-HhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 557778888999999999987632111 0111111111111 1112233222 22222222222111 111222
Q ss_pred hhhcc-----CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 240 NHQDI-----APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 240 ~~~~~-----~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
...|. ..+..|...+..++..++|.++++.+.|.++|..||
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11111 123468888999999999999999999999886444
No 93
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.52 E-value=2.7e-12 Score=112.63 Aligned_cols=289 Identities=16% Similarity=0.157 Sum_probs=159.3
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
|+|.|+ .|...++-.|.-|..+|++-+-.. .-+.+|.++...+.-..++.+||||..+..+.+-.+ +..++...+|+
T Consensus 177 ~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~-~a~f~~w~~ES 253 (528)
T KOG0253|consen 177 GFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMF-AARFLVWVYES 253 (528)
T ss_pred hccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHH-HHHHHhhcccC
Confidence 677888 899889999999999999877777 888999999999988889999999998876644333 33444456888
Q ss_pred CCCCCCCCHHHHH------HHH---------------------hc--------cCCCCCCCCCChhHhhcc---hHHHHH
Q 021674 82 PAEDPQLRPAEKK------LIV---------------------SS--------CASKEPVKTIPWGLILSK---PPVWAL 123 (309)
Q Consensus 82 p~~~~~~~~~~~~------~~~---------------------~~--------~~~~~~~~~~~~~~l~~~---~~~~~~ 123 (309)
|+-+-....+++. ..+ ++ +..+++ ....+.++.. ++...+
T Consensus 254 pRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~--rg~~~nLlsp~lrkttlll 331 (528)
T KOG0253|consen 254 PRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEV--RGGTTNLLSPKLRKTTLLL 331 (528)
T ss_pred cchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcccccc--ccchHhhcChHHHHHHHHH
Confidence 8742111111110 000 00 000111 1122333321 122234
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-----------------hCCCcc-chhhH-hhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 124 IVSHFCHNWGTFILLTWMPTYYNQV-----------------LHFNLT-ESGLF-CVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~wlp~~l~~~-----------------~g~s~~-~~g~~-~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
+...|...+.+|+.........|.. ..-... +..+. .....+.-.-|.++.+++.||+|||
T Consensus 332 w~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK 411 (528)
T KOG0253|consen 332 WRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK 411 (528)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch
Confidence 4444545556677665554444421 111111 11222 2334567778889999999999987
Q ss_pred CCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH--HHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHh
Q 021674 185 GLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC--SQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGV 261 (309)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~ 261 (309)
+ .+. ..++...++........++.....+++. .+..+++ ...|.+.+|..| +.|+++.|..+...+
T Consensus 412 k--------TMa-l~l~~f~iflfll~~c~~rn~~tvllf~arafisg~f--qvaYvYtPEVyPTavRatgvGtcSsmaR 480 (528)
T KOG0253|consen 412 K--------TMA-LSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAF--QVAYVYTPEVYPTAVRATGVGTCSSMAR 480 (528)
T ss_pred h--------HHH-HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchh--eEEEEecCcccchhhhhcchhhhhhHHh
Confidence 4 111 1111112221111111122222222222 2222223 334555567777 479999999999999
Q ss_pred hhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHh-hcCCccc
Q 021674 262 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL-FSTGEKV 307 (309)
Q Consensus 262 lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 307 (309)
+|++++|.+. ...+.......+...+.+.+.+.....+ +.||.++
T Consensus 481 IggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 481 IGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 9999999887 4444444555555555444444333333 3555544
No 94
>PRK09848 glucuronide transporter; Provisional
Probab=99.52 E-value=9.5e-13 Score=123.12 Aligned_cols=162 Identities=17% Similarity=0.124 Sum_probs=99.1
Q ss_pred hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhh
Q 021674 111 WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 190 (309)
Q Consensus 111 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~ 190 (309)
+++++|||+++...+..++...+.+...++.|.|+++.+|.+....++......++..++.++.++++||+++|+..
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~--- 297 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF--- 297 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence 56789999998888887877777788888888899988898776666655555677888999999999999866311
Q ss_pred HHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhcc--------CCCchHHHHHHHhHhHh
Q 021674 191 VRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI--------APRYSGVLLGLSNTAGV 261 (309)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~a~~~~~~~~~ 261 (309)
.....+.............++.+.... ....+.+.+.. .....+...|. ..+..|...++.|+...
T Consensus 298 ----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~-~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~k 372 (448)
T PRK09848 298 ----LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT-MTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRK 372 (448)
T ss_pred ----HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHH
Confidence 111111111111111111112222211 22222222211 11111111111 12356999999999999
Q ss_pred hhhhHHHhHHHhhcccCCc
Q 021674 262 LAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 262 lgg~i~~~~~g~l~~~~~~ 280 (309)
+|+++++.+.|.+++..||
T Consensus 373 lg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 373 CGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999998876433
No 95
>PRK10054 putative transporter; Provisional
Probab=99.52 E-value=7.4e-13 Score=121.92 Aligned_cols=171 Identities=13% Similarity=0.092 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674 119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~ 198 (309)
.++.+....++...+.+....++|.|+++++|+|..+.|+..+...++..++.+..|+++||+++|+... .
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~---------~ 78 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYML---------L 78 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH---------H
Confidence 3566777788888889999999999999999999999999999999999999999999999999874211 1
Q ss_pred hhHHHHHHHHHhhccCchHHHHHHH-HHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674 199 GFLGPAFFLTQLSHVDSPAMAVLCM-ACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 276 (309)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~ 276 (309)
+.....+........++.+..+.+. ..+.+...+ .+...... +..++++++.+.++.+...++|+.++|.+.+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 79 AITAFASGFIAIPLVNNVTLVVLFFALINCAYSVF-STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111111222332222221 111111111 11112222 23456789999999999999999999999999876
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHh
Q 021674 277 HGSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
.+|+..|...+++.+++.+...+
T Consensus 158 -~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 158 -QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred -hccCcHHHHHHHHHHHHHHHHHH
Confidence 47998998877777666544433
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.49 E-value=6.8e-12 Score=118.93 Aligned_cols=65 Identities=18% Similarity=0.429 Sum_probs=57.8
Q ss_pred CCcccccchhhHHHHHhccCCCcc--hhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhh
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 65 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~--rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~ 65 (309)
+|+|.|...|...++++|++|+++ |.++.++++.+.++|..+|+.+++++.+++|||+.|.+.++
T Consensus 122 ~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i 188 (500)
T PRK09584 122 IAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV 188 (500)
T ss_pred HHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 477888899999999999998654 56788999999999999999999999999999999998664
No 97
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.48 E-value=5.3e-12 Score=107.24 Aligned_cols=272 Identities=21% Similarity=0.229 Sum_probs=164.6
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchh--HhhhhHHHHH---------
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF--YSFGSLGTVW--------- 70 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F--~i~~~~~~v~--------- 70 (309)
|+|.=..-.+-.+++..||..||.+.++|+..+..-+|+..-..+-+++.+..+ ..| .-...+++..
T Consensus 147 GIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~--~~~~~~ghT~LG~~l~~~~~tc~~ 224 (459)
T KOG4686|consen 147 GIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG--RMFPGVGHTLLGLWLCFEVKTCKQ 224 (459)
T ss_pred ccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH--HhcccchHHHHHHHHHHHHHHHHH
Confidence 455555566777899999999999999999999999999877777777766432 011 0011111110
Q ss_pred -HHHHH-hhcccCCCCCCCCCHHHHHHHHhccC-CCCCCCCCChhHhh-cchHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 021674 71 -FTVWL-SKAHSSPAEDPQLRPAEKKLIVSSCA-SKEPVKTIPWGLIL-SKPPVWALIVSHFCHNWGTFILLTWMPTYYN 146 (309)
Q Consensus 71 -~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~ 146 (309)
.+..+ .-..| +.+|+..-+++.. .++| + +.++. -.|++|.+..++.+.+...+-+++--|.+++
T Consensus 225 slical~lg~~D--------~rAerilh~e~g~~Ge~p--k--Ltdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~ 292 (459)
T KOG4686|consen 225 SLICALSLGLSD--------DRAERILHLEEGFLGEEP--K--LTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQ 292 (459)
T ss_pred HHHHHHHhhhhh--------hHHHHHHhhhcCcccCCc--c--cccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 00000 00011 1223222122211 1122 1 11222 2478999998888888888889999999999
Q ss_pred HHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHH
Q 021674 147 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 226 (309)
Q Consensus 147 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (309)
+.+|+|+.+++-+.+.......+-+++.|.++||+|++-+++.. . .+..++. =....+ .-.+|+...+++...
T Consensus 293 ~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~--a---~~~tl~~-H~~l~F-t~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 293 KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS--A---CILTLLG-HSGLFF-TFLSPYTSMTFLGLS 365 (459)
T ss_pred HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH--H---HHHHHHH-hhhHHh-hhccHHHHHHHHhhh
Confidence 99999999999999999888999999999999999965222111 0 0111110 001111 113455444444332
Q ss_pred HhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCch--HH-HHHHHHHHHHHHHH
Q 021674 227 QGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWD--DV-FKVSVGLYLVGTAV 297 (309)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~--~~-~~~~~~~~~~~~~~ 297 (309)
....+. .+++......| ++.|++.|..+.+.|+|-++.|.+.|.+.|+ +++. -+ |+......+....+
T Consensus 366 ysllAc---slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgi 438 (459)
T KOG4686|consen 366 YSLLAC---SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGI 438 (459)
T ss_pred HHHHHH---HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 222211 12333333344 5789999999999999999999999999998 4443 23 33344444444433
No 98
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.47 E-value=2.2e-12 Score=121.47 Aligned_cols=176 Identities=13% Similarity=0.115 Sum_probs=115.3
Q ss_pred hcchH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHH--hCCCccchhhHhhhhHHHHHHHHHHHHHHHHH-HHHcCCChhh
Q 021674 115 LSKPP-VWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTT 190 (309)
Q Consensus 115 ~~~~~-~~~~~~~~~~~~~~~~~~~~wlp~~l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr-~~~r~~~~~~ 190 (309)
+++|+ ++.+....++...++|+...++|.|+++. +|+|..+++.......++..++.+++|+++|| +|||+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~---- 81 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT---- 81 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH----
Confidence 44543 55566667777788999999999999987 89999999999999999999999999999999 787631
Q ss_pred HHHHHHHHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhhhhhcc-CC---CchHHHHHHHhHhHhhhhh
Q 021674 191 VRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDI-AP---RYSGVLLGLSNTAGVLAGV 265 (309)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~g~a~~~~~~~~~lgg~ 265 (309)
+. .+.....+........++.... +.....+.+.+.+ .+...+...+. ++ +.++.+.++.+...++|+.
T Consensus 82 ----l~-~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~-~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ 155 (475)
T TIGR00924 82 ----MV-LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLF-KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF 155 (475)
T ss_pred ----HH-HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccc-cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH
Confidence 11 1111111111111222222222 2222222222211 11111111111 22 3477888999999999999
Q ss_pred HHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHh
Q 021674 266 FGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 266 i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
++|.+.|++.++.+|+..|.+.++..+++.+.+..
T Consensus 156 ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 156 ISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999878999998877666555544433
No 99
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.47 E-value=1.3e-11 Score=117.22 Aligned_cols=265 Identities=17% Similarity=0.169 Sum_probs=151.4
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHh-hccc
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS-KAHS 80 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~-~~~~ 80 (309)
|+|.|... .....++|..|.|.|....++.....-.....++.++..+..+-+|||.|++..+...+.++..+. +.|+
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 55654444 445668999999999988887776655555567777777766789999999877655443322221 2221
Q ss_pred C-CCCC-CCCCHHHH-HHH--------------------------------------------------HhccC-CCCCC
Q 021674 81 S-PAED-PQLRPAEK-KLI--------------------------------------------------VSSCA-SKEPV 106 (309)
Q Consensus 81 ~-p~~~-~~~~~~~~-~~~--------------------------------------------------~~~~~-~~~~~ 106 (309)
+ ++.+ ++.++.|+ +.. .|... .++|
T Consensus 221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~P- 299 (599)
T PF06609_consen 221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDP- 299 (599)
T ss_pred chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCC-
Confidence 1 1111 11111111 000 00000 0111
Q ss_pred CCCChhHhhcch-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc---chhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674 107 KTIPWGLILSKP-PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT---ESGLFCVLPWLTMAFSANLGGWIADTLV 182 (309)
Q Consensus 107 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~---~~g~~~~~~~~~~~ig~~~~G~l~dr~~ 182 (309)
-.|. +++|++ .+.......+.....+|+...+.|...+..++-++. +.+.+..+.+++..++..+.|.+..|.+
T Consensus 300 -l~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 300 -LFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR 377 (599)
T ss_pred -cCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence 2344 478874 455555666666667888889999999888888764 6788888888888899999999998775
Q ss_pred HcCCChhhHHHHHHHHhhHHHHHHHHH-hhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhH
Q 021674 183 SKGLSVTTVRKIMQSIGFLGPAFFLTQ-LSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAG 260 (309)
Q Consensus 183 ~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~ 260 (309)
+-| ..+........+++... ....++....+. ....+++.+..............+++..|+++++...++
T Consensus 378 ~~K-------w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R 450 (599)
T PF06609_consen 378 HIK-------WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIR 450 (599)
T ss_pred chh-------HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHH
Confidence 321 11111111111111111 122233332222 222233332221111111122345567999999999999
Q ss_pred hhhhhHHHhHHHhhccc
Q 021674 261 VLAGVFGTAATGYILQH 277 (309)
Q Consensus 261 ~lgg~i~~~~~g~l~~~ 277 (309)
.+||.++..+...+..+
T Consensus 451 ~~GGsIg~aIy~~I~~n 467 (599)
T PF06609_consen 451 SIGGSIGYAIYNAIFTN 467 (599)
T ss_pred HHhhHHHHHHHHHHHHh
Confidence 99999999888776653
No 100
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.46 E-value=1.1e-11 Score=111.07 Aligned_cols=283 Identities=17% Similarity=0.204 Sum_probs=178.9
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHh---hhhHHHHHHHHHHhhc
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS---FGSLGTVWFTVWLSKA 78 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i---~~~~~~v~~~~~~~~~ 78 (309)
|+|.+.......++++|..|+|||+++.++..+-.-+|.+++..+.+.+.+.++=.-..-+ .+.+.++..++..+.
T Consensus 100 G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg- 178 (403)
T PF03209_consen 100 GLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWG- 178 (403)
T ss_pred HhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 6777778888899999999999999999999999999999999999988887653333222 233333322222221
Q ss_pred ccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhh
Q 021674 79 HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL 158 (309)
Q Consensus 79 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~ 158 (309)
.| |++++..+.+ .++++.-...++++.+||+..+.....++...+++.--.-+-+|=-+++|+|+.|+..
T Consensus 179 ~E-~r~~~~~~~~---------~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~ 248 (403)
T PF03209_consen 179 QE-PRRSRRAAAA---------ERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTR 248 (403)
T ss_pred cc-cCCcccccCC---------CCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHH
Confidence 22 2221111000 0111111224677788888887776667767777777788999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH-HHhhccCchHH-HHHHHHHHHhhhhhhhcc
Q 021674 159 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL-TQLSHVDSPAM-AVLCMACSQGTDAFSQSG 236 (309)
Q Consensus 159 ~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (309)
+......+..+|..+.|++..|..+++ +.....+.....++.+ ......++++. -...+.++++.+.++...
T Consensus 249 Lta~~~~G~L~G~~~~g~~l~~~~~~~------~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vga 322 (403)
T PF03209_consen 249 LTAFWGGGTLLGMLLAGFLLSRRLGKK------RTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGA 322 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCch------HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHH
Confidence 999999999999999999888532211 1111111111111221 11223333332 233344455555554444
Q ss_pred hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-----C-----CchHHHHHHHHHHHHHHHHHHhh
Q 021674 237 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-----G-----SWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 237 ~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+.....-..+++.|+.+|.=...+.++..++..+.|.+.|. + +|..+|.+=+.+.+++..+....
T Consensus 323 ls~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 323 LSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43333334567889999998998888889999999988774 2 35667766555555555444433
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.45 E-value=4.3e-12 Score=118.87 Aligned_cols=172 Identities=16% Similarity=0.212 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-HHcCCChhhHHHHHH
Q 021674 118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQ 196 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-~~r~~~~~~~~~~~~ 196 (309)
+.++.+..........+|++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |||+. .+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~-------il- 80 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA-------VM- 80 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH-------HH-
Confidence 4456666666777788999999999999999999999999999888888899999999999999 87631 11
Q ss_pred HHhhHHHHHHHHHhhcc-CchH-HHHHHHHHHHhhhhhhhcchhhhhhcc-CC--CchHHHHHHHhHhHhhhhhHHHhHH
Q 021674 197 SIGFLGPAFFLTQLSHV-DSPA-MAVLCMACSQGTDAFSQSGLYSNHQDI-AP--RYSGVLLGLSNTAGVLAGVFGTAAT 271 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~g~a~~~~~~~~~lgg~i~~~~~ 271 (309)
.+.+..++........ +.+. ..+.......+.+.+ .+...+...|. ++ ++|..+.++.+...++|+.++|.+.
T Consensus 81 -iG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~-~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 81 -LGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLF-KSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred -HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccc-cccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 1111111111111111 1111 111111111222211 11111222232 22 3688889999999999999999999
Q ss_pred HhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674 272 GYILQHGSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 272 g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
|++.++.+|+..|...++..+++.+.+.
T Consensus 159 g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 159 GYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 9999888899999887666555554443
No 102
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.45 E-value=5.8e-17 Score=151.41 Aligned_cols=298 Identities=16% Similarity=0.148 Sum_probs=163.7
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh---cCCcchhHhhhhHHHHHHHHHHhh
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---FGWPSVFYSFGSLGTVWFTVWLSK 77 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~---~gWr~~F~i~~~~~~v~~~~~~~~ 77 (309)
+|+|.|+..+....++.|..|+|+|++..++......+|.+++..++....+. .+||..+.+..+++++.. +....
T Consensus 112 ~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~-~~~~~ 190 (451)
T PF00083_consen 112 IGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVL-LLRFF 190 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence 68999999999999999999999999999999999999999988877655443 459999998777775543 33345
Q ss_pred cccCCCCC---CCCCHHHHHHHH------------hccCCCC--CCCCCChhHhhcchHH----HHHHHHHHHHHH-HHH
Q 021674 78 AHSSPAED---PQLRPAEKKLIV------------SSCASKE--PVKTIPWGLILSKPPV----WALIVSHFCHNW-GTF 135 (309)
Q Consensus 78 ~~~~p~~~---~~~~~~~~~~~~------------~~~~~~~--~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~~ 135 (309)
.||+|+.. .+.++.++...+ ++..+++ .+++..++++++++.. ........+... +.+
T Consensus 191 ~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~ 270 (451)
T PF00083_consen 191 LPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGIN 270 (451)
T ss_pred cccccceecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccc
Confidence 78888732 111111111000 0000000 0011346667776441 111222222222 233
Q ss_pred HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH--Hhhcc
Q 021674 136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT--QLSHV 213 (309)
Q Consensus 136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 213 (309)
....+.|.++ +..|.+.. -.......+...++.+++.++.||+|||+...... .........+. .....
T Consensus 271 ~~~~~~~~i~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~------~~~~~~~~~~~~~~~~~~ 341 (451)
T PF00083_consen 271 FIFYYSPSIF-ENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL------LLMAICSLILGIIFFLGV 341 (451)
T ss_pred cccccccccc-cccccccc--ccccccccccccccccccccccccccccccccccc------cccccccccccccccccc
Confidence 4445555555 44677665 22223344556677778889999999886443211 00000111110 11111
Q ss_pred Cc----hHHHHHHHHHHHhhhhhhhcch-hhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHH
Q 021674 214 DS----PAMAVLCMACSQGTDAFSQSGL-YSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVS 287 (309)
Q Consensus 214 ~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~ 287 (309)
+. ....+.+............... +....|. +.+.|+.+.++.+..++++++++|.+...+.+..+....+.+.
T Consensus 342 ~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~ 421 (451)
T PF00083_consen 342 SSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIF 421 (451)
T ss_pred ccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence 11 1111111111100001111111 1222344 4568999999999999999999999988888775423344444
Q ss_pred HHHHHHHHHHHH--hhcCCcccc
Q 021674 288 VGLYLVGTAVWN--LFSTGEKVV 308 (309)
Q Consensus 288 ~~~~~~~~~~~~--~~~~~~~~~ 308 (309)
+++.+++.+... ...||++++
T Consensus 422 ~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 422 AGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred HHHHHHHHhheeEEEeeCCCCCH
Confidence 444444443333 336666553
No 103
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.43 E-value=1.1e-11 Score=117.48 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=110.4
Q ss_pred CCChhHhhcchH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH-HHHcC
Q 021674 108 TIPWGLILSKPP-VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKG 185 (309)
Q Consensus 108 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr-~~~r~ 185 (309)
..|.+ ++|+|+ +|......++...++|++.+|+|.|+++++|+|..+++..............+++|+++|| +|+|+
T Consensus 11 ~~~~~-~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~ 89 (500)
T PRK09584 11 SVSLN-AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR 89 (500)
T ss_pred CCChh-hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 34444 557764 7777778888888999999999999999999999988877766555555556789999999 58763
Q ss_pred CChhhHHHHHHHHhhHHHHHHHHHhhcc-CchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CC--CchHHHHHHHhHhH
Q 021674 186 LSVTTVRKIMQSIGFLGPAFFLTQLSHV-DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-AP--RYSGVLLGLSNTAG 260 (309)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~g~a~~~~~~~~ 260 (309)
. .+ .+.....+........ +....... ....+.+.+.. .+...+...+. ++ +++..+.++.++..
T Consensus 90 ~-------~~--~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~-~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~ 159 (500)
T PRK09584 90 V-------IM--LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLF-KANPSSLLSTCYEKDDPRLDGAFTMYYMSI 159 (500)
T ss_pred H-------HH--HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcc-cCCHHHHHHHhcCCCchhhhhcchHHHHHH
Confidence 1 11 1111111111111111 12222211 11222222211 11111222222 22 23455778889999
Q ss_pred hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674 261 VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 261 ~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 295 (309)
++|+.++|.+.|++.|+.+|+..|.+.++..+++.
T Consensus 160 ~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 160 NIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999998889999988775555443
No 104
>PRK11462 putative transporter; Provisional
Probab=99.41 E-value=2.1e-10 Score=107.77 Aligned_cols=241 Identities=10% Similarity=0.022 Sum_probs=130.4
Q ss_pred HHHHhccCC-CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------CCcchhHhhhhHHHHHHHHHHhhcccCCCC
Q 021674 13 NNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 84 (309)
Q Consensus 13 ~~~i~~~~p-~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~ 84 (309)
.++.+|..+ ++||++..++-..+.++|..+++.+...+.+.+ ||+....+.++++++...+.+...+|++++
T Consensus 131 ~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~ 210 (460)
T PRK11462 131 CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA 210 (460)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC
Confidence 356677775 999999999999999999888877665555543 578877777777665544444333443211
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 85 DPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT---FILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
++ + +.+ -+...+.++|||+++.+....++..... .+...+.+.|. .|.. ...+.++.
T Consensus 211 ~~-----~----------~~~-~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~---~g~~-~~~~~~l~ 270 (460)
T PRK11462 211 PP-----T----------TTS-MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI---LGTP-EVFVAFLT 270 (460)
T ss_pred Cc-----c----------CCC-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh---cCCh-HHHHHHHH
Confidence 10 0 000 0112456788888776655544444433 33344444443 3432 33445556
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchH-HHHHHHHHHHhhhhhh--hcchh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFS--QSGLY 238 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~ 238 (309)
...++..++++++++++||+++|+.... .........+..... ..++.. ..+.....+.+.+... ...+.
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ 343 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFWW------TNALLAVISLAMFFV-PMQASITMFVFIFVIGVLHQLVTPIQWVMM 343 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHH------HHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678888999999999999987632110 011111111111111 111121 1111111222221111 01122
Q ss_pred hhhhc---cC--CCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 239 SNHQD---IA--PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 239 ~~~~~---~~--~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
+...| .. .+..|...+..+...++|.++++.+.|.+++..||
T Consensus 344 ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 344 SDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 21111 11 22346667777788999999999999998876433
No 105
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.41 E-value=4.6e-12 Score=114.07 Aligned_cols=251 Identities=18% Similarity=0.161 Sum_probs=153.0
Q ss_pred HHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc------CCcc--hhHhhhhHHHHHHHHHHhhcccCCCC
Q 021674 13 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPS--VFYSFGSLGTVWFTVWLSKAHSSPAE 84 (309)
Q Consensus 13 ~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~------gWr~--~F~i~~~~~~v~~~~~~~~~~~~p~~ 84 (309)
.++.+.|||++||+.+..+=..++.+|.++|..+...++++- .|.- .|+..+.++.+.+.+.....+++|+.
T Consensus 162 skiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t 241 (480)
T KOG2563|consen 162 SKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT 241 (480)
T ss_pred cHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 478899999999999999999999999999998888887653 5766 35545555554444555555666665
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhH
Q 021674 85 DPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPW 164 (309)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~ 164 (309)
+|....+... +.+- ....+.++||+++..++..+......+++..+.+-.-+ ...|++...+|.......
T Consensus 242 Pps~s~~~~~-------~~~f--~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~i 311 (480)
T KOG2563|consen 242 PPSASQAALQ-------DASF--PKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMI 311 (480)
T ss_pred CCchhHhhhh-------cCcH--HHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHH
Confidence 5433221110 0000 12356789999988877776665555666666554344 346888889999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH-hhccCchHHHHHHHHHHHhhhhhhhcch-h-hhh
Q 021674 165 LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ-LSHVDSPAMAVLCMACSQGTDAFSQSGL-Y-SNH 241 (309)
Q Consensus 165 ~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~ 241 (309)
+++.+++.+.|.+.||.++-+.. . +......+...+.+... ....+.......+...++.. ....++ + ...
T Consensus 312 v~Gmlga~~~gii~Dktk~fk~~-~---~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~--~~~~Pig~Elgv 385 (480)
T KOG2563|consen 312 VAGMLGALASGIIADKTKKFKLT-T---LVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG--TGYLPIGFELGV 385 (480)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHH-H---HHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh--cCCCCcceeeee
Confidence 99999999999999998542111 0 01111111111111111 11111111222222222211 111111 0 012
Q ss_pred hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674 242 QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 279 (309)
Q Consensus 242 ~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~ 279 (309)
+...|..=++.+|+.|..+++-+.+-..+.+...+..+
T Consensus 386 E~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 386 ETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred eeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 33567666788899999999999999999999887643
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.39 E-value=3e-11 Score=113.82 Aligned_cols=253 Identities=15% Similarity=0.080 Sum_probs=138.2
Q ss_pred hHHHHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-------cCCcchhHhhhhHHHHHHHHHHhhcccCC
Q 021674 11 AMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------FGWPSVFYSFGSLGTVWFTVWLSKAHSSP 82 (309)
Q Consensus 11 ~~~~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-------~gWr~~F~i~~~~~~v~~~~~~~~~~~~p 82 (309)
.-.++..|.. +++||.+..++-....++|..+.+.+...+.+. .+|+....+.+++.++.....++..+|++
T Consensus 126 p~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~ 205 (473)
T PRK10429 126 PFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY 205 (473)
T ss_pred hHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC
Confidence 3446778888 699999999997777777766665554433332 35677666666655544333333344432
Q ss_pred CCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhh
Q 021674 83 AEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL 162 (309)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~ 162 (309)
+.+.. ++++ .++.+ -+..++.++|||+++.+....++.....+......+.|.+...+ +....+.+...
T Consensus 206 ~~~~~-~~~~--------~~~~~-~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~ 274 (473)
T PRK10429 206 SSDNQ-VSAE--------GSHLT-LKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSY 274 (473)
T ss_pred Ccccc-cccc--------ccCCC-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHH
Confidence 11100 0000 00000 01123556789988887777777766666666666655544433 44556666666
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHh--hccCchHHHH-HHHHHHHhhhhhh--hcch
Q 021674 163 PWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDSPAMAV-LCMACSQGTDAFS--QSGL 237 (309)
Q Consensus 163 ~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~--~~~~ 237 (309)
..++..++.++.++++||+|+|+.... .....+...+..... ...++....+ .....+.+.+... ...+
T Consensus 275 ~~i~~ii~~~~~~~l~~r~gkk~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am 348 (473)
T PRK10429 275 AGAANLVTLILFPRLVKSLSRRILWAG------ASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIM 348 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHH------HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 668888999999999999997742111 001101111111111 1122222222 1122222222111 1111
Q ss_pred hhhhhc-----cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 238 YSNHQD-----IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 238 ~~~~~~-----~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
.+...| ...+..|...+..++...++.++++.+.|.+++..||
T Consensus 349 ~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 349 VADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 111111 1223468899999999999999999999999876433
No 107
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.38 E-value=1.2e-11 Score=114.58 Aligned_cols=181 Identities=16% Similarity=0.123 Sum_probs=112.9
Q ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674 113 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 192 (309)
Q Consensus 113 ~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~ 192 (309)
..+|+|++|.+...+++...+.+....++|.|+++++|+|+.+.|+..+...++..++.++.|+++||+++|+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~----- 79 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL----- 79 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence 356788999988888888877788899999999999999999999999999999999999999999999976421
Q ss_pred HHHHHHhhHHHHHH-HHHhhccC--chHHHHHHHHHHHhhhh-h-hhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHH
Q 021674 193 KIMQSIGFLGPAFF-LTQLSHVD--SPAMAVLCMACSQGTDA-F-SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG 267 (309)
Q Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~ 267 (309)
............ ........ ...........+...+. . ..........+..+++++...+..+..+++|..++
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~ 157 (420)
T PRK09528 80 --LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALC 157 (420)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHH
Confidence 111111110000 00000000 00000101111111110 0 00011111111123345667778888889999999
Q ss_pred HhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 268 TAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 268 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
|.+.|.+.+. +|+..|++.+++.+++.+.+...
T Consensus 158 ~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 158 AFIAGILFNI-NPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcc
Confidence 9999999875 68888887776666555444443
No 108
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.37 E-value=3.7e-11 Score=110.83 Aligned_cols=170 Identities=16% Similarity=0.203 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhh
Q 021674 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 200 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~ 200 (309)
+.+....++...+.+.....+|.|+++++|+|+.+.|+......+...+..++.|+++||+++|+. +. .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~--------l~-~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM--------IV-TGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH--------HH-HHH
Confidence 445567777788889999999999999999999999999999899998899999999999987632 11 111
Q ss_pred HHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674 201 LGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 278 (309)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~ 278 (309)
.............++.+..... ...+.+.+ ...+...+... ..++++++.+.++.+...++|..++|.+.|++. ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~ 161 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY 161 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 1111111111222333332222 22222221 11122222222 345678999999999999999999999999998 55
Q ss_pred CchHHHHHHHHHHHHHHHHHHhh
Q 021674 279 SWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+|+..|++.+.+.+++.+....+
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh
Confidence 79998888776666555443333
No 109
>PRK10504 putative transporter; Provisional
Probab=99.37 E-value=4.4e-11 Score=112.49 Aligned_cols=173 Identities=14% Similarity=0.172 Sum_probs=114.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
+++|.+....++.....+.+.+++|.+.++ +|.|..+.+...+...++..++.++.|+++||+|||+.. .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~--------~- 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF--------F- 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH--------H-
Confidence 356777777777777778888999999875 899999999998888899999999999999999987321 1
Q ss_pred HhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 198 IGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
.+..............++....... ...+.+.+.. .+.......+ .++++++.+.++.+...++|..++|.+.|.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMM-VPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1111111111111122333322222 2222222211 1111222223 35567899999999999999999999999999
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 276 QHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
|+.+|+..|.+...+..++.+.....
T Consensus 159 ~~~gw~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 159 EYASWHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99889999988776666555444444
No 110
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.35 E-value=4.8e-11 Score=111.21 Aligned_cols=163 Identities=15% Similarity=0.115 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH
Q 021674 122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 201 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~ 201 (309)
...+.+++.+...+.+..++|.+.++ +|+|..+.+++.+...++..++.++.|+++||+|+|+... .+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~---------~~~~ 96 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMG---------IGLI 96 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHH---------HHHH
Confidence 33444455445556777889888865 8999999999999999999999999999999999774211 1111
Q ss_pred HHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674 202 GPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 279 (309)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~ 279 (309)
...+........++....... ...+.+.+ ...........+ .++++++.+.++.+...++|+.++|.+.+.+.++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQG-WGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-ccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 111111112222233222221 11222221 111222222233 345689999999999999999999999999999888
Q ss_pred chHHHHHHHHHHHHHH
Q 021674 280 WDDVFKVSVGLYLVGT 295 (309)
Q Consensus 280 ~~~~~~~~~~~~~~~~ 295 (309)
|+..|.+.+++.++..
T Consensus 176 w~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 176 WRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999988766554443
No 111
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.33 E-value=4.8e-11 Score=113.60 Aligned_cols=184 Identities=14% Similarity=0.116 Sum_probs=116.2
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh-cCCcchhHhhhhHHHHHHHHHHhhcc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~-~gWr~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
+|+|.|+.......+++|..|++.||...+.......+|..++..++...-+. ++||..+.+..+.+++..+. +...|
T Consensus 152 ~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~p 230 (513)
T KOG0254|consen 152 TGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLP 230 (513)
T ss_pred hccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCC
Confidence 58999999999999999999999999999999999999999996555544332 59999888866666655444 55678
Q ss_pred cCCCCCCCC-CHHHH-HHH---Hh---------------cc-CCC-CCCCCCChhHhhcc----hHHHHHHHHHHHHHHH
Q 021674 80 SSPAEDPQL-RPAEK-KLI---VS---------------SC-ASK-EPVKTIPWGLILSK----PPVWALIVSHFCHNWG 133 (309)
Q Consensus 80 ~~p~~~~~~-~~~~~-~~~---~~---------------~~-~~~-~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~ 133 (309)
|+|+..-+. +.+|. +.. +. +. .+. ....+..++++++. +......+..+-...+
T Consensus 231 esp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG 310 (513)
T KOG0254|consen 231 ESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTG 310 (513)
T ss_pred CChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhC
Confidence 888632111 11111 100 00 00 000 00011123444431 1122233333444445
Q ss_pred HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674 134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 187 (309)
Q Consensus 134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~ 187 (309)
.....+|.+.++++ .|.+... .......++...+++.++.++.||+|||+..
T Consensus 311 ~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll 362 (513)
T KOG0254|consen 311 INYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL 362 (513)
T ss_pred CceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 56666888888765 4776443 4445566778888888999999999987543
No 112
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.32 E-value=6.4e-11 Score=108.94 Aligned_cols=175 Identities=14% Similarity=0.103 Sum_probs=107.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674 117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~ 196 (309)
||.+|.....+++...+...+..++|.|+++++|+|+.+.|+..+...++..++.++.|+++||+|||+.... .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~------~ 74 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLW------I 74 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH------H
Confidence 5778888888888888888888999999999999999999999999999999999999999999997742211 0
Q ss_pred HHhhHHHHHHHHHhhccC---c-hHHHHHH--HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhH
Q 021674 197 SIGFLGPAFFLTQLSHVD---S-PAMAVLC--MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA 270 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~---~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~ 270 (309)
.................+ . ....... ...+.+... ..+.......+..+ .++...+.....+++|..++|.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g~~~ 152 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSA-GAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHhhh-hcccccchhhhhcccHHHHHHHH
Confidence 011111111000011111 0 1111111 111111111 11111111122222 23345566677788999999999
Q ss_pred HHhhcccCCchHHHHHHHHHHHHHHHHHHh
Q 021674 271 TGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 271 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
.|.+.+. +|+..|.+.+.+.++..+....
T Consensus 153 ~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 153 AGILFSI-DPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred Hhhhhcc-CchHHHHHHHHHHHHHHHHHHH
Confidence 9988765 7998898877666665544433
No 113
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.32 E-value=1e-10 Score=105.02 Aligned_cols=163 Identities=19% Similarity=0.299 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674 125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 204 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~ 204 (309)
+..++...........+|.++.+++|.|..+.+++.+...++..++.+..|+++||+|||+ .+. .+.....
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--------~l~-~~~~~~~ 73 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR--------VLI-IGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH--------HHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee--------eEe-ehhhhhh
Confidence 4455556666667778887888889999999999999999999999999999999999873 111 1111111
Q ss_pred HHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674 205 FFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 282 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~ 282 (309)
+........++.+..+ .....+.+.+ ...+.......+. ++++++.+.++.+...++|..++|.+.+.+.++.+|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~ 152 (352)
T PF07690_consen 74 LGSLLLAFASNFWLLLIARFLLGIGSG-FFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRW 152 (352)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCC
T ss_pred hHHHHhhhhhhHHHHhhhccccccccc-cccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccc
Confidence 1111111112333222 2222232221 1122222333343 45689999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHH
Q 021674 283 VFKVSVGLYLVGTAV 297 (309)
Q Consensus 283 ~~~~~~~~~~~~~~~ 297 (309)
.|.+.+++.+++.+.
T Consensus 153 ~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 153 AFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhh
Confidence 999888888877664
No 114
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.31 E-value=1.2e-10 Score=110.04 Aligned_cols=171 Identities=12% Similarity=0.169 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH-HHHcCCChhhHHHHHH
Q 021674 118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr-~~~r~~~~~~~~~~~~ 196 (309)
+.+|.+....++..+++|++..+++.|+++++|++..+++...........+..+++|+++|| +|||+.. ..
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~-------~~ 86 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI-------VL 86 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH-------HH
Confidence 446666777777788999999999999999999999999888877777777888899999999 8887421 11
Q ss_pred HHhhHHHHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhhhhhc-cCCC--chHHHHHHHhHhHhhhhhHHHhHHH
Q 021674 197 SIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQD-IAPR--YSGVLLGLSNTAGVLAGVFGTAATG 272 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~g~a~~~~~~~~~lgg~i~~~~~g 272 (309)
............... .+.+... +.....+.+.+.+ .+...+...| .+++ +++.+.++.+...++|..++|.+.|
T Consensus 87 g~~~~~~g~~~~~~~-~~~~~ll~~~~~l~~ig~g~~-~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 87 GAIVLAIGYFMTGMS-LLKPDLIFIALGTIAVGNGLF-KANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHh-ccchhHHHHHHHHHHhccccc-cCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 111111111111111 1112212 1111122222211 1112222222 2333 4577888899999999999999999
Q ss_pred hhcccCCchHHHHHHHHHHHHHHHH
Q 021674 273 YILQHGSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~ 297 (309)
++.++.+|+..|.+..+..+++.+.
T Consensus 165 ~l~~~~gw~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 165 VIADKFGYSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHH
Confidence 9999988999998865544444433
No 115
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.31 E-value=7.9e-10 Score=105.46 Aligned_cols=260 Identities=13% Similarity=0.072 Sum_probs=141.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|++.++....+..+++|++++|+|+.++.+ ......++.++++.++++.+ +||+.+++..+++.+.+++ ....+|
T Consensus 181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~E 256 (521)
T KOG0255|consen 181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPE 256 (521)
T ss_pred HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCc
Confidence 4888999999999999999999999999999 88888999999999999988 8999999988888765433 233457
Q ss_pred CCCCCC---CCCHHHH---HHHHhc---------------cC-CC--CCCCCCChhHhhcchHHHHHHHHHHHHHHHHHH
Q 021674 81 SPAEDP---QLRPAEK---KLIVSS---------------CA-SK--EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 136 (309)
Q Consensus 81 ~p~~~~---~~~~~~~---~~~~~~---------------~~-~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 136 (309)
+|+... +.++.++ +....+ .. .+ ...++..+.++++.|++........+ .+-.+.
T Consensus 257 s~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~-~~~~~~ 335 (521)
T KOG0255|consen 257 SPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLF-IWFVFS 335 (521)
T ss_pred ChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHH-HHHHHh
Confidence 776321 1111111 110000 00 00 00012335667788764433322222 222333
Q ss_pred HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHH-HHHHHHhhccCc
Q 021674 137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP-AFFLTQLSHVDS 215 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 215 (309)
+..+.-.+..+..|-+.... ....+..-..+....+...||.|||.. .....+... ..+.......+.
T Consensus 336 ~~y~gl~~~~~~lg~~~~~~---~~~~~~~~~p~~~~~~~~~~~~gR~~~--------~~~~~~~~~~~~~~~~~~~~~~ 404 (521)
T KOG0255|consen 336 LVYYGLSLNVSGLGGNIYLN---FTLSGLVELPAYFRNGLLLPEFGRRPP--------LFLSLFLAGIGLLLFGWLPDDL 404 (521)
T ss_pred HHHHhhhhhhhhcCchHHHH---HHHHHHHHhhHHHHHHHHHHHhCcHHH--------HHHHHHHHHHHHHHHHHhhccc
Confidence 44443334444444443322 222223444555566889999976521 111111111 111111111111
Q ss_pred h-HHHHHHHHHHHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674 216 P-AMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ 276 (309)
Q Consensus 216 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~ 276 (309)
. .........+.+....+....+....|..| ..|..+.+..+...+++++++|.+.-....
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 405 GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 011111111111111112222333344445 469999999999999999999988755433
No 116
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.31 E-value=2.5e-10 Score=105.09 Aligned_cols=171 Identities=17% Similarity=0.191 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccch-----hhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 021674 119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTES-----GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRK 193 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~-----g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~ 193 (309)
.+..+....++...+......++|.|+++ +|.+..+. ++......+...++.++.|+++||++||+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~------- 86 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM------- 86 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH-------
Confidence 34445566677777777778899999975 78886653 788888889999999999999999987632
Q ss_pred HHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674 194 IMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 271 (309)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~ 271 (309)
+. .+..............++....... ...+.+.+ . .+..... .+..++++++.+.++.+....+|..++|.+.
T Consensus 87 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 87 -LL-RSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-F-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred -HH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-h-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111111111111122233222221 22222111 1 1111122 2334567889999999999999999999999
Q ss_pred HhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 272 GYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 272 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+.+.+..+|+..|.+.+++.+++.+...++
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 163 GLLADSYGLRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988789999888777766665544443
No 117
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.30 E-value=1.9e-10 Score=105.78 Aligned_cols=60 Identities=17% Similarity=0.252 Sum_probs=56.0
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhh
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 63 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~ 63 (309)
|++||+.+ +..+++++|+|++||+++.|++.++..+|.+++++++++ +..+|||+-+.++
T Consensus 126 GvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln 185 (511)
T TIGR00806 126 SVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLN 185 (511)
T ss_pred HHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHH
Confidence 88999999 999999999999999999999999999999999999999 5678999977653
No 118
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.29 E-value=1.1e-10 Score=107.37 Aligned_cols=171 Identities=18% Similarity=0.160 Sum_probs=108.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674 117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~ 196 (309)
++++..+.+..+....+.......+|.++++++|.|..+.|+..+...++..++.++.|+++||+|||+.....
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~------ 87 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFG------ 87 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHH------
Confidence 44555566677777777777788999999999999999999999999999999999999999999987532110
Q ss_pred HHhhHHHHHHHHHhhccCc-----hHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674 197 SIGFLGPAFFLTQLSHVDS-----PAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTA 269 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~ 269 (309)
.................++ ....+.. ...+.+.+.. ........ ...++++++.+.++.+...++|..++|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 166 (399)
T PRK05122 88 LCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLA-GTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP 166 (399)
T ss_pred HHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhh-cchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH
Confidence 0111111111111111111 1111111 1222222111 12122222 2345678899999888888888899999
Q ss_pred HHHhhcccCCchHHHHHHHHHHHHH
Q 021674 270 ATGYILQHGSWDDVFKVSVGLYLVG 294 (309)
Q Consensus 270 ~~g~l~~~~~~~~~~~~~~~~~~~~ 294 (309)
+.+.+.++.+|+..+.+...+.++.
T Consensus 167 l~~~l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 167 LGVLLYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9999998888988776655544433
No 119
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=7.2e-11 Score=104.24 Aligned_cols=260 Identities=17% Similarity=0.134 Sum_probs=135.5
Q ss_pred chhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh---hcCCcchhHhhh----hHHHHHHHHHHhhccc
Q 021674 8 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---RFGWPSVFYSFG----SLGTVWFTVWLSKAHS 80 (309)
Q Consensus 8 ~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~---~~gWr~~F~i~~----~~~~v~~~~~~~~~~~ 80 (309)
....+.++++|.+++|+|++.++.++...++|-++||.+|+++.+ ..| +..|.... +++..-.....++.+|
T Consensus 137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 345677899999999999999999999999999999999999988 222 22232211 1121101122223344
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCCCh---hHhhcchHH------HHHHHHHHHHHHHHHHHHHhHHHHH-HHHhC
Q 021674 81 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPW---GLILSKPPV------WALIVSHFCHNWGTFILLTWMPTYY-NQVLH 150 (309)
Q Consensus 81 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~------~~~~~~~~~~~~~~~~~~~wlp~~l-~~~~g 150 (309)
.-+.+++. +|....++...+++...+.++ -..+||++. |..+....+.+.-.|......+.++ .+.+|
T Consensus 216 TL~~rk~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg 293 (451)
T KOG2615|consen 216 TLPLRKRN--DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFG 293 (451)
T ss_pred cccchhhc--ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccC
Confidence 32221111 110000000000000001110 123455432 2222222222223344444444444 67889
Q ss_pred CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhh
Q 021674 151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTD 230 (309)
Q Consensus 151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (309)
+++.+.|.+.+..++.+.+....-....||.+. ... .........+..++.+.. ....+....+....-....
T Consensus 294 ~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~----~~~-a~l~~~l~~~vP~~llls--~~~~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 294 YSSMQQGKVLSTTGLLMLVIQLALVPILPRYKG----NIK-AVLLFSLLLIVPAFLLLS--LARTPVVLYLGSTLKSFST 366 (451)
T ss_pred CChhhheeeeehhhHHHHHHHHhcccccccccc----chh-hHHHHHHHHHHHHHHHHh--ccccchhhhHHHHHHHHHH
Confidence 999999999988877776665555555555431 111 111112222334443333 2222322211111111112
Q ss_pred hhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 231 AFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 231 ~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
+...+.+....+.. +++++|++.|+....+.++=++||.+.|.+..+
T Consensus 367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 22233344433333 456899999999999999999999999999887
No 120
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.28 E-value=8.8e-11 Score=108.75 Aligned_cols=185 Identities=16% Similarity=0.135 Sum_probs=117.7
Q ss_pred CChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCCh
Q 021674 109 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSV 188 (309)
Q Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~ 188 (309)
.|++.+.|+|.++......++...+.......+|.+.++ .+.|+.+.|+......++..++.++.|+++||++||+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~ 86 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL 86 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence 355666678888777777777777776777788888766 5779999999999999999999999999999999875432
Q ss_pred hhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhH
Q 021674 189 TTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVF 266 (309)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i 266 (309)
.. ..+...+..... .......++...... ....+.+.+ ...+....... ..++++++.+.++.+...++|..+
T Consensus 87 ~~--~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 161 (417)
T PRK10489 87 LA--RGTCGLGFIGLA--LNAFLPEPSLLAIYLLGLWDGFFGS-LGVTALLAATPALVGRENLMQAGAITMLTVRLGSVI 161 (417)
T ss_pred eh--HHHHHHHHHHHH--HHHHcCCCcHHHHHHHHHHHHHHHH-HHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHh
Confidence 21 111111111110 001111222222221 111222211 11122222222 334567899999999999999999
Q ss_pred HHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674 267 GTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 267 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
+|.+.|.+.+..+|+..|.+.+...+++.+...
T Consensus 162 g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 162 SPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999887888888877666665554433
No 121
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=1.9e-10 Score=104.56 Aligned_cols=167 Identities=10% Similarity=0.007 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674 125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 204 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~ 204 (309)
+.+++...+.......+|.|+++++|.|..+.|++.+...+...+..++.|+++||+|||+. +...+.....
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~--------~~~~~~~~~~ 75 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKG--------LILFCCLLAA 75 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH--------HHHHHHHHHH
Confidence 44566667777788899999999999999999999999999999999999999999987641 1111111111
Q ss_pred HHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHH--HHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 205 FFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVL--LGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a--~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
.........++....+.. ...+.... ...+.......+. +++.++.+ .+..+...++|..++|.+.+.+.+..+|
T Consensus 76 ~~~~~~~~~~~~~~l~~~~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~ 154 (375)
T TIGR00899 76 LACLLFAWNRNYFLLLVLGVLLSSFAS-TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGF 154 (375)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhccc
Confidence 111111222333222211 11111111 1111112222222 23334433 5667777889999999999999988889
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 021674 281 DDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~ 300 (309)
+..|.+.+.+.++..+...+
T Consensus 155 ~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 155 TVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999887776665544444
No 122
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.27 E-value=9.8e-10 Score=102.71 Aligned_cols=291 Identities=15% Similarity=0.112 Sum_probs=152.7
Q ss_pred cchhhHHHHHhccCCCcch--hHHHHHHHhhhhhHHHHhhhhHHHH--hhhc-------------CCcchhHhhhhHHHH
Q 021674 7 VAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFL--IHRF-------------GWPSVFYSFGSLGTV 69 (309)
Q Consensus 7 ~~~p~~~~~i~~~~p~~~r--g~~~g~~~~~~~~g~~lg~~l~~~l--~~~~-------------gWr~~F~i~~~~~~v 69 (309)
...+...++++|.+|+++| +++.++.+...++|+++|+.+++.+ .+.+ +-|..|++.+++-++
T Consensus 130 ~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i 209 (477)
T TIGR01301 130 MLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAI 209 (477)
T ss_pred HHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHH
Confidence 3456677899999998865 6899999999999999999999875 2322 457888875554444
Q ss_pred HHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhh----cc-hHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 021674 70 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL----SK-PPVWALIVSHFCHNWGTFILLTWMPTY 144 (309)
Q Consensus 70 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~-~~~~~~~~~~~~~~~~~~~~~~wlp~~ 144 (309)
...+.....+|+|..+++-.++++ . ++ .++......+++++ +- |.+|.+....++.-.+.+.+..+.+.|
T Consensus 210 ~~l~t~~~v~E~~~~~~~~~~~~~-~--~~--~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~ 284 (477)
T TIGR01301 210 LTYIALSAVKENPLIGSDDFINSE-A--AP--PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDW 284 (477)
T ss_pred HHHHHeeeeeccCCCccccchhhh-c--cc--ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 333334445665432111000000 0 00 00000011223332 22 567888888999888999999999999
Q ss_pred HH-HHhCCCccch---------hhH-hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc-
Q 021674 145 YN-QVLHFNLTES---------GLF-CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH- 212 (309)
Q Consensus 145 l~-~~~g~s~~~~---------g~~-~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 212 (309)
.- +.++-++.+. |.. .....+...+.+++--++.+|+|+|+. .+.....+..+++. ...+......
T Consensus 285 vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~-~~~~s~~~~~~~l~-~~~~i~~~~~~ 362 (477)
T TIGR01301 285 MGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR-LWGIVNIILAICLA-ATVLVTYVAKN 362 (477)
T ss_pred HHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHHHH-HHHHHHhhhhc
Confidence 86 4555443221 222 233334444555566666777764321 11101011111111 1111111000
Q ss_pred --c---------Cch--HHHHHHHHHHHhhh-hhhhcchhhhh-hccC--CCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 213 --V---------DSP--AMAVLCMACSQGTD-AFSQSGLYSNH-QDIA--PRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 213 --~---------~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~--~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
. .+. ....+......|.. +...+.=|+.. ++.+ .+..|.-+|+.|....+.+.+.....|.+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~ 442 (477)
T TIGR01301 363 SRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWD 442 (477)
T ss_pred cccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 12222221222221 11111112221 2222 356799999999999999998888888854
Q ss_pred cc-C-CchHHHHHHHHHHHHHHHHHHhhcCC
Q 021674 276 QH-G-SWDDVFKVSVGLYLVGTAVWNLFSTG 304 (309)
Q Consensus 276 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (309)
+. + +....+.++++..+++++...+...|
T Consensus 443 ~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 443 QLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 44 2 34556666777777776555554433
No 123
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.27 E-value=8.1e-10 Score=101.73 Aligned_cols=247 Identities=14% Similarity=0.088 Sum_probs=154.2
Q ss_pred HHHhccC-CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh-------hcCCcchhHhhhhHHHHHHHHHHhhcccCCCCC
Q 021674 14 NILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 85 (309)
Q Consensus 14 ~~i~~~~-p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~-------~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~ 85 (309)
++.++.- +++||.+-.++-+...++|..+...+-+.++. ..|||..-.+.++++.+..+..++..+|++.+.
T Consensus 135 al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~ 214 (467)
T COG2211 135 ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVET 214 (467)
T ss_pred hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Confidence 4455555 58999999999999999998877655544443 358888888888888877666666666654322
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH
Q 021674 86 PQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL 165 (309)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~ 165 (309)
...++ +.+.+.+.++..++||+++..+.+.+++...+..-..+..+-|.+..+|.+..+....+.....
T Consensus 215 ~~~~~-----------~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~ 283 (467)
T COG2211 215 QPTKT-----------GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGA 283 (467)
T ss_pred ccCcc-----------cccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHH
Confidence 11000 0001001123467899998888877777766666666777788888888888888888877777
Q ss_pred HHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HHhhhhhhhcchhhhhh--
Q 021674 166 TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSGLYSNHQ-- 242 (309)
Q Consensus 166 ~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-- 242 (309)
+..++.++..++++|+|+|+..... ..+..+.. ..+... ..++....++..+. +.+.+. .....++...
T Consensus 284 ~~l~~~~~~p~L~~~~gkk~~~~~~-----~~~~~i~~-~~~~f~-~~~~~~l~~~~~~i~~~g~~~-~~~l~wam~~d~ 355 (467)
T COG2211 284 GLLIGLILWPRLVKKFGKKKLFLIG-----LLLLAVGY-LLLYFT-PAGSVVLIVVALIIAGVGTGI-ANPLPWAMVADT 355 (467)
T ss_pred HHHHHHHhHHHHHHHhchHHHHHHH-----HHHHHHHH-HHHHhh-cCcchHHHHHHHHHHHHHhhc-cccccHHHhcch
Confidence 7778899999999999987422111 01111111 111111 12223233222222 222221 1111122211
Q ss_pred ----cc--CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674 243 ----DI--APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 279 (309)
Q Consensus 243 ----~~--~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~ 279 (309)
|. ..+..|...+.+++.+.+|.+++..+.|++++..|
T Consensus 356 vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 356 VDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred hhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22 23456999999999999999999999999987643
No 124
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.26 E-value=3.2e-10 Score=102.72 Aligned_cols=154 Identities=16% Similarity=0.133 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~ 199 (309)
+|.....++......+....++|.++++++|+|..+.+++.....++..++.++.|+++||+|+|+.. . .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--------~-~~ 73 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT--------T-LS 73 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH--------H-HH
Confidence 45566666776777888889999989999999999999999999999999999999999999976421 1 11
Q ss_pred hHHHHHHHHHhhccC-chHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674 200 FLGPAFFLTQLSHVD-SPAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 276 (309)
Q Consensus 200 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~ 276 (309)
.+...+........+ +...... -...+.+.+.. ........+ .++++|+.+.++.+...++|..+++.+.+.+.+
T Consensus 74 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 74 LLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSF--ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhh--HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 111111111111222 2322222 12222221111 111222233 355789999999887788888777777666554
Q ss_pred ----------cCCchHHH
Q 021674 277 ----------HGSWDDVF 284 (309)
Q Consensus 277 ----------~~~~~~~~ 284 (309)
+.+|+..|
T Consensus 152 ~~~~~~~~~~~~~w~~~~ 169 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAF 169 (366)
T ss_pred HHHhcccccccccccchh
Confidence 23688877
No 125
>PRK11043 putative transporter; Provisional
Probab=99.26 E-value=4.9e-10 Score=103.13 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHhHHHH--HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674 127 HFCHNWGTFILLTWMPTY--YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 204 (309)
Q Consensus 127 ~~~~~~~~~~~~~wlp~~--l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~ 204 (309)
....+.++++...++|.+ +++++|.|..+.++..+...++..++.++.|+++||++||+.. . .+.....
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~--------~-~~~~~~~ 82 (401)
T PRK11043 12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL--------L-AGLSLFA 82 (401)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH--------H-HHHHHHH
Confidence 333444556666777766 6778899999999999999999999999999999999977421 1 1111111
Q ss_pred HHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674 205 FFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 282 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~ 282 (309)
+........++...... ....+.+.+... ....... +..++++++.+.+..+....+++.++|.+.+++.++.+|+.
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 161 (401)
T PRK11043 83 LGSLGMLWVESAAQLLVLRFVQAVGVCSAA-VIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQA 161 (401)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Confidence 11111112233332222 122222211111 1111122 23445567778888888889999999999999999888999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 021674 283 VFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~ 301 (309)
.|.+...+.++..+....+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 162 IFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 8887776666555444433
No 126
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=5e-10 Score=105.66 Aligned_cols=178 Identities=15% Similarity=0.061 Sum_probs=101.5
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674 115 LSKPPVWALIVSHFCHNWGTFILLTWMPT--YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 192 (309)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~wlp~--~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~ 192 (309)
+++++.+.............+....|.|. .+++++|+|..+.+.......++..++.++.|+++||+|+|+.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~------ 103 (476)
T PLN00028 30 FARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG------ 103 (476)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH------
Confidence 45555444433333222233333344442 4567799999999998888888999999999999999997631
Q ss_pred HHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674 193 KIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 271 (309)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~ 271 (309)
+ ..+.+...+........++...... .+..+++.+... ..........++++||.+.++.+..+++|+.+++.+.
T Consensus 104 --~-~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~ 179 (476)
T PLN00028 104 --S-AFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM 179 (476)
T ss_pred --H-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111111122233332222 222233222211 1111112224557899999999988888888887666
Q ss_pred Hhhcc----c-----CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 272 GYILQ----H-----GSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 272 g~l~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
+.+.+ . .+|+..|.+.+++.++..+...++.
T Consensus 180 ~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 180 PLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 55432 1 3799999987777766655555443
No 127
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.25 E-value=9.7e-13 Score=124.92 Aligned_cols=185 Identities=17% Similarity=0.248 Sum_probs=2.8
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc------------------C----Ccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------------------G----WPS 58 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~------------------g----Wr~ 58 (309)
.|+|+...++...+++-|..++|+-+.++|++.+...+|+++|..+++.....+ . |=.
T Consensus 151 ~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWL 230 (539)
T PF03137_consen 151 IGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWL 230 (539)
T ss_dssp -SSS----------------------------------------------------------------------------
T ss_pred HhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHH
Confidence 489999999999999999999999999999999999999999999988765422 1 444
Q ss_pred hhHhhhhHHHHHHHHHHhhcccCCCCC--CC-CCHHHHH---HHHhccCCCCC-------CC--CCChhHhhcchHHHHH
Q 021674 59 VFYSFGSLGTVWFTVWLSKAHSSPAED--PQ-LRPAEKK---LIVSSCASKEP-------VK--TIPWGLILSKPPVWAL 123 (309)
Q Consensus 59 ~F~i~~~~~~v~~~~~~~~~~~~p~~~--~~-~~~~~~~---~~~~~~~~~~~-------~~--~~~~~~l~~~~~~~~~ 123 (309)
-|++.+.+.++..+.++.+.++.|+++ ++ .+.++++ ...++..+++. .+ ....++++|||.+...
T Consensus 231 Gfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~ 310 (539)
T PF03137_consen 231 GFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCL 310 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHH
Confidence 455555555544332222222222220 00 0000000 00000000000 00 1124678999998887
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHHHHHHHHHHHHHHHHHcC
Q 021674 124 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~G~l~dr~~~r~ 185 (309)
.+...+.....-++.+++|.|+++.++.+++++.++.....+ ++.+|.+++|++..|++-+.
T Consensus 311 ~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~ 373 (539)
T PF03137_consen 311 ILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSA 373 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcH
Confidence 777777777888999999999999999999999998865554 67799999999999986543
No 128
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.25 E-value=7.8e-11 Score=110.79 Aligned_cols=261 Identities=8% Similarity=-0.041 Sum_probs=136.0
Q ss_pred cccchhhHHHHHhccCCCcchhH---HHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccC
Q 021674 5 EGVAMPAMNNILSKWVPVAERSR---SLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 81 (309)
Q Consensus 5 ~g~~~p~~~~~i~~~~p~~~rg~---~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~ 81 (309)
.+..-+++-.+..|..+ |++.. .+++.....++|.++|+.+++.+.+.++||..|++.+.+.++..... ...+|+
T Consensus 134 ~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~ 211 (468)
T TIGR00788 134 KALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVS-NLSKER 211 (468)
T ss_pred HHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH-Hhcccc
Confidence 34444566678888888 44443 44444455668999999999999999999999998877766553222 233443
Q ss_pred CC-CCCCCCHHHHHH--HHhcc-CCCCCCCCCChhHhhcchHHHHHHHHHHH-HHHH-HHHHHHhHHHHHHHHhCCCccc
Q 021674 82 PA-EDPQLRPAEKKL--IVSSC-ASKEPVKTIPWGLILSKPPVWALIVSHFC-HNWG-TFILLTWMPTYYNQVLHFNLTE 155 (309)
Q Consensus 82 p~-~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~wlp~~l~~~~g~s~~~ 155 (309)
++ ..|+..+.+... ..... .+.......+.++.+++|..|...+..++ .... ......++ +.++..|+|+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~--~~~~~lG~s~~~ 289 (468)
T TIGR00788 212 RAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC--ATTQCLPGGPSF 289 (468)
T ss_pred cccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE--EEcccCCCCcch
Confidence 21 111111100000 00000 00000000123455788888764443333 1111 11101111 334578999999
Q ss_pred hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH---h---hc----cCchHHHHHH-HH
Q 021674 156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ---L---SH----VDSPAMAVLC-MA 224 (309)
Q Consensus 156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~----~~~~~~~~~~-~~ 224 (309)
.|+...+.+++..++..+.+++.+|++.| +.+. ++.+...+.... . .. ..+....... ..
T Consensus 290 ~G~~~~~~~v~~i~g~~~~~~~~~~~~~r--------~~l~-~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 290 SGMSKVVGNLGSLCGVGGYDRFLKTFPYR--------LLFG-VTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCHH--------HHHH-HHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 99999887766666666666665555433 2221 222222111100 0 00 0111111111 11
Q ss_pred HHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674 225 CSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 279 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~ 279 (309)
-..+.+ +......... +..+++..|+..++.+...++|+.+++.++|.+.++.+
T Consensus 361 ~~~~~g-~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQ-LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHH-HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111111 1122222222 33456788999999999999999999999999887643
No 129
>PRK12382 putative transporter; Provisional
Probab=99.24 E-value=2.2e-10 Score=105.08 Aligned_cols=168 Identities=14% Similarity=0.118 Sum_probs=103.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674 117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~ 196 (309)
++.++......++...........+|.++++++|+|+.+.|+..+...++..++.+..|+++||+|||+.....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~------ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQG------ 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHH------
Confidence 44455555555555556666778888899999999999999999999999999999999999999987421110
Q ss_pred HHhhHHHHHHHHHhhc-----cCchHHHHHH-HHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674 197 SIGFLGPAFFLTQLSH-----VDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTA 269 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~ 269 (309)
........+....... ..+.....+. ...+.+.... .+...+. .+..++++|+.+.+..+...+++..++|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~ 166 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQL-LTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAP 166 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHH
Confidence 0111011111000001 0111111111 1222222111 1111111 22345678999999988888889999999
Q ss_pred HHHhhcccCCchHHHHHHHHHH
Q 021674 270 ATGYILQHGSWDDVFKVSVGLY 291 (309)
Q Consensus 270 ~~g~l~~~~~~~~~~~~~~~~~ 291 (309)
+.+.+.+..+|+..+.+.....
T Consensus 167 ~~~~l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 167 LGLLLHSHFGFAALALTTMVLP 188 (392)
T ss_pred HHHHHHhccChHHHHHHHHHHH
Confidence 9999988878887666544333
No 130
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=7.7e-11 Score=105.63 Aligned_cols=175 Identities=11% Similarity=0.096 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHH---HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674 122 ALIVSHFCHNWGTFI---LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 198 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~---~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~ 198 (309)
.+....++.+.++|- .++..-+.++++.|+|-.|.|.+.+...++-.++..+.|.++||...|. ++..
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~---------fm~~ 99 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY---------FMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce---------eehH
Confidence 344444554455544 2244445566667899999999999999999999999999999988663 2334
Q ss_pred hhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHH--Hhh
Q 021674 199 GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAAT--GYI 274 (309)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~--g~l 274 (309)
+++.+++....+...++.....++ ...+.. .....++..... +=.++++||+..++=|+..|+||++.|.+. +.+
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~f-Qg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWF-QGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 444455444444443332222222 222221 112223333332 334667899999999999999999999999 999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674 275 LQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 306 (309)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (309)
.++++|+..|++.+++.++..++..+..++.+
T Consensus 179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99989999999988888877777666665554
No 131
>PTZ00207 hypothetical protein; Provisional
Probab=99.24 E-value=1.4e-09 Score=103.84 Aligned_cols=182 Identities=15% Similarity=0.120 Sum_probs=119.3
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
+|+|++...+++...+.+||| ++||+++|+..+..++|+++..++...+.+ .+|++.|++.+++++++.++++...++
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 377888888999999999997 789999999999999999875555444444 479999999888887765555544433
Q ss_pred CCCC-----CCCCCHHHHH------------------H-------------------------------------HH---
Q 021674 81 SPAE-----DPQLRPAEKK------------------L-------------------------------------IV--- 97 (309)
Q Consensus 81 ~p~~-----~~~~~~~~~~------------------~-------------------------------------~~--- 97 (309)
.|.. +.+.+++|+. . ..
T Consensus 208 p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~ll 287 (591)
T PTZ00207 208 PPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLT 287 (591)
T ss_pred CcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 3311 1111222221 0 00
Q ss_pred ---h--------------c-cCC---------------C---------C---CCCCCChhHhhcchHHHHHHHHHHHHHH
Q 021674 98 ---S--------------S-CAS---------------K---------E---PVKTIPWGLILSKPPVWALIVSHFCHNW 132 (309)
Q Consensus 98 ---~--------------~-~~~---------------~---------~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 132 (309)
. + +.+ + + |.....+.+.+++..+|.++..++|..-
T Consensus 288 l~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g 367 (591)
T PTZ00207 288 VIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVG 367 (591)
T ss_pred HHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhC
Confidence 0 0 000 0 0 0000134556677889999988888766
Q ss_pred HHHHHHHhHHHHHHHHhCCCccc--hhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 133 GTFILLTWMPTYYNQVLHFNLTE--SGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 133 ~~~~~~~wlp~~l~~~~g~s~~~--~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
....+++.+-...+..-|.+..+ ..++.++.+++..+|.+..|+++...-+|
T Consensus 368 ~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~ 421 (591)
T PTZ00207 368 AHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKR 421 (591)
T ss_pred chheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhh
Confidence 66677777777776543774333 33377889999999999999999444333
No 132
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.23 E-value=1.3e-09 Score=99.29 Aligned_cols=263 Identities=11% Similarity=0.070 Sum_probs=143.7
Q ss_pred hHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCC
Q 021674 26 SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEP 105 (309)
Q Consensus 26 g~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 105 (309)
+.=.|=.-...++|-+++..++|.+.+. +=+..|++....+++..++.+...++++++.+. .++++ .++++
T Consensus 137 ~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~-~~~~~-------~~~~~ 207 (412)
T PF01306_consen 137 GFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEV-ADALG-------AKKDK 207 (412)
T ss_dssp SS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-S-STTSS-------S----
T ss_pred cCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhh-hcccc-------cCCCC
Confidence 3444555566788888888888888763 335778875555554433333233333322111 11000 00111
Q ss_pred CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674 106 VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV---LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 182 (309)
Q Consensus 106 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~---~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~ 182 (309)
.+..+..+++|+|++|.+.+........++.+-.-.|.|+.+- .+.+....|.+.+...+.=.+...+..++.+|+|
T Consensus 208 ~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig 287 (412)
T PF01306_consen 208 VSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG 287 (412)
T ss_dssp --HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0011234688999999877665555444555555577777642 2344455677777777777888889999999999
Q ss_pred HcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHH-HhHhH
Q 021674 183 SKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGL-SNTAG 260 (309)
Q Consensus 183 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~-~~~~~ 260 (309)
.|+ .+...+.+.. +=.......++++.....=..-..-.+....+.+... ...+++..++...+ .+...
T Consensus 288 ~k~--------~Lllag~i~~-iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~ 358 (412)
T PF01306_consen 288 AKN--------LLLLAGVIMA-IRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAK 358 (412)
T ss_dssp HHH--------HHHHHHHHHH-HHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTH
T ss_pred hHh--------HHHHHHHHHH-HHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence 763 2222222211 1112223345555433221110000111112222222 33456677777776 46788
Q ss_pred hhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCCcc
Q 021674 261 VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 306 (309)
Q Consensus 261 ~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (309)
+++.++.+.+.|.+-|+-|++..|++.+.+.++..++-.+..++++
T Consensus 359 ~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 359 QIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 8999999999999999988888888877777666666555554444
No 133
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.23 E-value=9.6e-10 Score=101.10 Aligned_cols=178 Identities=11% Similarity=0.067 Sum_probs=105.6
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHH-HHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674 114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVR 192 (309)
Q Consensus 114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~-~~~ig~~~~G~l~dr~~~r~~~~~~~~ 192 (309)
.+ |.+.+..+...++...+.......+|.|+++++|.|+.+.|+..+...+ +...+.+.+++ +||+|+|+.
T Consensus 12 ~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~------ 83 (393)
T PRK15011 12 SF-DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKS------ 83 (393)
T ss_pred hc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhH------
Confidence 44 5556666667777777777888999999999999999999998765544 55566666777 999998742
Q ss_pred HHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhhhcc-CCCc--hHHHHHHHhHhHhhhhhHHHh
Q 021674 193 KIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRY--SGVLLGLSNTAGVLAGVFGTA 269 (309)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~g~a~~~~~~~~~lgg~i~~~ 269 (309)
.+. .......+........++............+......+.......+. +++. .+...+..+...++|..++|.
T Consensus 84 -~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~ 161 (393)
T PRK15011 84 -LIV-FCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPP 161 (393)
T ss_pred -HHH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhH
Confidence 111 11111111111111222232221111111111111111111112222 2222 344557788888999999999
Q ss_pred HHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 270 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 270 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+.+.+.++.+|+..|++.++..++..+....+
T Consensus 162 i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 193 (393)
T PRK15011 162 LAYALAMGFSFTVMYLSAAVAFIVCGVMVWLF 193 (393)
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHhh
Confidence 99999988889999988777666555444443
No 134
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=8.8e-10 Score=102.08 Aligned_cols=167 Identities=11% Similarity=0.024 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHH
Q 021674 124 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP 203 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~ 203 (309)
.+.+++...-......-.| .+++++|+|..+.++..+...++..++.+..|+++||+|||+. +. .+....
T Consensus 14 ~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~--------~~-~~~~~~ 83 (412)
T TIGR02332 14 FILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW--------IA-GIMVLW 83 (412)
T ss_pred HHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH--------HH-HHHHHH
Confidence 3333433333344444444 7888999999999999999999999999999999999998741 11 111111
Q ss_pred HHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc-----
Q 021674 204 AFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQ----- 276 (309)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~----- 276 (309)
.+........++...... -...+.+.+.. .+.......+. ++++|+.+.++.+....+|..+++.+.+++.+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 111111122233333222 22223332221 12222223343 55689999999999999999999999998874
Q ss_pred -cCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 277 -HGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 277 -~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
..+|+..|.+.++..++..++..++
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhc
Confidence 2589999998766665554444444
No 135
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.22 E-value=6.6e-10 Score=101.34 Aligned_cols=155 Identities=12% Similarity=0.048 Sum_probs=98.1
Q ss_pred HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674 137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP 216 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (309)
+...+|.+ ++++|+|..+.|++.+...++..++.+..|+++||+|||+. +. ..+.............++.
T Consensus 10 ~~~~lp~i-~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~--------~~-~~~~~~~~~~~~~~~~~~~ 79 (368)
T TIGR00903 10 FSPVLSLV-AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF--------LF-GSLATFAAAAGRLLDPFNY 79 (368)
T ss_pred HHhhHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH--------HH-HHHHHHHHHHHHHHHhccH
Confidence 33445555 55689999999999999999999999999999999996521 11 1111111111101111223
Q ss_pred HHHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHH
Q 021674 217 AMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 295 (309)
...+.. +..+.+.+.. ........+..++++|+.+.++.+....+|..+++.+.+.+.++.+|+..|.+.+++.++..
T Consensus 80 ~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 80 EWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 222222 2222222211 11111122345678999999999999999999999999999988899999988666665555
Q ss_pred HHHHhhc
Q 021674 296 AVWNLFS 302 (309)
Q Consensus 296 ~~~~~~~ 302 (309)
+.+.++.
T Consensus 159 ~~~~~~l 165 (368)
T TIGR00903 159 ILVLAAL 165 (368)
T ss_pred HHHHHHc
Confidence 5545443
No 136
>PRK03699 putative transporter; Provisional
Probab=99.21 E-value=2.1e-09 Score=98.92 Aligned_cols=167 Identities=13% Similarity=0.090 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~ 199 (309)
.|...+.+++.....+.+...+|.+. +++|+|..+.++..+...++..++.++.|+++||+++|+. +. .+
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~--------~~-~~ 78 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ--------LI-FG 78 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH--------HH-HH
Confidence 34444444444444556667777765 5689999999999999999999999999999999998741 11 11
Q ss_pred hHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 200 FLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
.....+........++....... ...+.+.+ ...+.......+ .++++|+.+.+..+....+++.++|.+.+.+++.
T Consensus 79 ~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 79 FALMILAVAGLMFSHSLALFSIAMFVLGVVSG-ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHhhH-hhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111111111122333322222 22222222 111112222223 3446789999988888889999999999988764
Q ss_pred -CCchHHHHHHHHHHHHHHHH
Q 021674 278 -GSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~ 297 (309)
.+|+..|.+.+.+.++..+.
T Consensus 158 ~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 158 SIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred cccHHHHHHHHHHHHHHHHHH
Confidence 68999998776666554433
No 137
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.20 E-value=5.6e-10 Score=100.62 Aligned_cols=169 Identities=12% Similarity=0.021 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
+....++...+......-+|.|..+ .+.|..+.+++.+...++..++.++.|+++||+|||+.... .......
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~------~~~~~~~ 76 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIG------ADLIRAV 76 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHH------HHHHHHH
Confidence 3444555555555666777887765 69999999999999999999999999999999998742111 0010001
Q ss_pred HHHHHHHhhcc--CchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674 203 PAFFLTQLSHV--DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 278 (309)
Q Consensus 203 ~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~ 278 (309)
........... .+.+.... ....+.+.+ ...+...+...|. ++++++.+.+..+....+|..++|.+.+.+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 77 LVAVLPFVALLGGLNIWQVYVLAGILAIAQA-FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111111 12222222 122222221 1122222333343 4468999999999999999999999999999888
Q ss_pred CchHHHHHHHHHHHHHHHHHH
Q 021674 279 SWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~ 299 (309)
+|+..|.+.+...+++.+...
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 156 GIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 899988877666655544433
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.20 E-value=8.1e-10 Score=101.41 Aligned_cols=170 Identities=16% Similarity=0.071 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh
Q 021674 120 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~ 199 (309)
.+.+.+..++.....+.....+|. +++++|.|..+.++......++..++.+..|+++||++||+. +. .+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~ 80 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKL--------LI-GL 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH--------HH-HH
Confidence 344444444443444444445665 456799999999999999999999999999999999998731 11 11
Q ss_pred hHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 200 FLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
..............++.+..... ...+.+.+.. .+...+...+ .++++|+.+.++.+....++..++|.+.+.+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~ 159 (390)
T PRK03545 81 FVLFIASHVLSALAWNFTVLLISRIGIAFAHAIF-WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY 159 (390)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 11111111112223344333222 2222221111 1111222233 3557899999999999999999999999999888
Q ss_pred CCchHHHHHHHHHHHHHHHHHHh
Q 021674 278 GSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
.+|+..|.+.+++.++..+....
T Consensus 160 ~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 160 LGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHH
Confidence 88999998877776655544333
No 139
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.20 E-value=9.3e-10 Score=100.25 Aligned_cols=157 Identities=17% Similarity=0.093 Sum_probs=98.6
Q ss_pred HHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674 133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 212 (309)
Q Consensus 133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (309)
+.......+|. +++++|.|..+.++......++..++.++.|+++||++||+. +. .+.............
T Consensus 20 ~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~--------~~-~~~~~~~~~~~~~~~ 89 (385)
T TIGR00710 20 GIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPV--------LL-LGLFIFALSSLGLAL 89 (385)
T ss_pred HHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH--------HH-HHHHHHHHHHHHHHH
Confidence 33334444554 456789999999999999999999999999999999987631 11 111111111111112
Q ss_pred cCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHH
Q 021674 213 VDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 290 (309)
Q Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~ 290 (309)
.++....... ...+.+.+.. .+.......| .++++++.+.++.+....++..++|.+.+.+.++.+|+..|.+.+++
T Consensus 90 ~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~ 168 (385)
T TIGR00710 90 SNNIETLLVLRFVQAFGASAG-SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLA 168 (385)
T ss_pred HccHHHHHHHHHHHHcchhHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 2233322221 2222221111 1112222233 34567999999999999999999999999999988899988887766
Q ss_pred HHHHHHHHHh
Q 021674 291 YLVGTAVWNL 300 (309)
Q Consensus 291 ~~~~~~~~~~ 300 (309)
.+++.+....
T Consensus 169 ~~~~~~~~~~ 178 (385)
T TIGR00710 169 GILLSALIFF 178 (385)
T ss_pred HHHHHHHHHH
Confidence 6655544433
No 140
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.19 E-value=3e-10 Score=108.99 Aligned_cols=184 Identities=16% Similarity=0.226 Sum_probs=131.6
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------------------CCcchhH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------------------GWPSVFY 61 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------------------gWr~~F~ 61 (309)
.|+|+-..+|...+++-|...+|+-..++|++.+...+|+++|..+++++...+ -|..-|+
T Consensus 247 ~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 247 LGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred hhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 389999999999999999999999999999999999999999999999886532 2566677
Q ss_pred hhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhccC-CCC-CC--C---C--CChhHhhcchHHHHHHHHHHHHHH
Q 021674 62 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCA-SKE-PV--K---T--IPWGLILSKPPVWALIVSHFCHNW 132 (309)
Q Consensus 62 i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~-~~--~---~--~~~~~l~~~~~~~~~~~~~~~~~~ 132 (309)
+.|.+.++..+.++.+.++.|+..++....+.+..+++.. .++ +. + + ...+++++||.+....+...+...
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~ 406 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESL 406 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 7777666554433333334343221111111111111111 001 00 0 0 124568899998888888888888
Q ss_pred HHHHHHHhHHHHHHHHhCCCccchhhHhhhhH-HHHHHHHHHHHHHHHHHHHc
Q 021674 133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~-~~~~ig~~~~G~l~dr~~~r 184 (309)
.+-++.+++|.||++.+|.+...+.++..... -++.+|.+++|++.-|+.-+
T Consensus 407 ~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 407 AITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 89999999999999999999999999885554 46778999999999988543
No 141
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.19 E-value=1.5e-09 Score=99.70 Aligned_cols=162 Identities=11% Similarity=-0.033 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674 128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL 207 (309)
Q Consensus 128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~ 207 (309)
.+...........+|.+. +++|.|+.+.++......++..++.++.|+++||+|||+.. . .+.....+..
T Consensus 18 ~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~--------~-~~~~~~~~~~ 87 (394)
T PRK11652 18 AVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI--------L-VGMSIFILGT 87 (394)
T ss_pred HHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH--------H-HHHHHHHHHH
Confidence 333333444445566655 56899999999999999999999999999999999976311 1 1111111111
Q ss_pred HHhhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHH
Q 021674 208 TQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK 285 (309)
Q Consensus 208 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~ 285 (309)
......++...... ....+.+.+.. .........| .++++++.+.+..+....++..++|.+.+.+.++.+|+..|.
T Consensus 88 ~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~ 166 (394)
T PRK11652 88 LVALFAHSLTVLIAASAIQGLGTGVG-GVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYL 166 (394)
T ss_pred HHHHHHccHHHHHHHHHHHHhhhhHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 11112223322222 12222221111 1111111122 344678888888888889999999999999988888999998
Q ss_pred HHHHHHHHHHHHHHh
Q 021674 286 VSVGLYLVGTAVWNL 300 (309)
Q Consensus 286 ~~~~~~~~~~~~~~~ 300 (309)
+.+++.++..+....
T Consensus 167 ~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 167 FLLLLGAGVTFSMAR 181 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 876655544433333
No 142
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.18 E-value=1.4e-09 Score=99.58 Aligned_cols=169 Identities=12% Similarity=0.064 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
+..+.+....++.....+.....+|.+. +++|+|..+.++..+...++..++.+..|+++||++||+. +.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--------~~- 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELA-HDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI--------LL- 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHH-HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH--------HH-
Confidence 3455566666776667777778887755 5689999999999999999999999999999999997631 11
Q ss_pred HhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 198 IGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
.+.....+........++.+..... ...+.+.+... ........+ .++++++.+.+..+....++..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFF-GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 1111111111112223344333222 22222222111 111112223 34457888899888888999999999999998
Q ss_pred ccCCchHHHHHHHHHHHHHHHH
Q 021674 276 QHGSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~ 297 (309)
+..+|+..|.+.+++.++..+.
T Consensus 152 ~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 152 QEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred hhccHHHHHHHHHHHHHHHHHH
Confidence 8888999998877666555443
No 143
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.17 E-value=1.9e-09 Score=99.48 Aligned_cols=159 Identities=11% Similarity=0.040 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674 119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~ 198 (309)
.+....+..++...+.+....++|++++ ++|+|..+.++......++..++.++.|+++||++||+... ...
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~-------~~~ 85 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLK-ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM-------IGL 85 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHH-HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-------HHH
Confidence 3445566666667777777889999995 57999999999999999999999999999999999874211 111
Q ss_pred hhHHHH-HHHHHhhc-cCchHHHHH-HHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhh-hHHHhHHHh
Q 021674 199 GFLGPA-FFLTQLSH-VDSPAMAVL-CMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAG-VFGTAATGY 273 (309)
Q Consensus 199 ~~~~~~-~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg-~i~~~~~g~ 273 (309)
...... ........ ..+...... ....+.+.... ........ +..++++++.+.|+.++..++|. .++|.+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~ 164 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLF-AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY 164 (402)
T ss_pred HHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHH-HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111 11111111 122222221 11122222111 11111222 33467789999999999989886 578999899
Q ss_pred hcccCCchHHHHH
Q 021674 274 ILQHGSWDDVFKV 286 (309)
Q Consensus 274 l~~~~~~~~~~~~ 286 (309)
+.+..+|...++.
T Consensus 165 l~~~~g~~~~~~~ 177 (402)
T TIGR00897 165 AIPAFGEMNTLWS 177 (402)
T ss_pred cccccchHHHHHH
Confidence 8887665444443
No 144
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.17 E-value=6.2e-10 Score=103.87 Aligned_cols=175 Identities=10% Similarity=-0.008 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
+.++...+.+.+.+.....+..++| ++++ +|+|+.+.++......++..++.+..|+++||+++|+..... .
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~------~ 98 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAG------L 98 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHH------H
Confidence 3333333433443333444556666 4555 599999999999999999999999999999999976422110 0
Q ss_pred HhhHHHHHHHHHhhc-cCchHHHHH-HHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674 198 IGFLGPAFFLTQLSH-VDSPAMAVL-CMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 274 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l 274 (309)
+......+....... .++...... ....+.+.+.. .+...... +..++++++.+.++.+...++++.++|.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~-~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMG-WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcc-hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 111111111111111 112211111 11222221111 11111222 234567899999999999999999999888876
Q ss_pred cc-cCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 275 LQ-HGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 275 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
.+ +.+|+..|++.+++.++..+...++
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 55 4689999988777766655444443
No 145
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.17 E-value=1.5e-08 Score=93.26 Aligned_cols=184 Identities=15% Similarity=0.189 Sum_probs=105.1
Q ss_pred hHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674 112 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV 191 (309)
Q Consensus 112 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~ 191 (309)
.+++|||++....+..++.....-...++.+.|+++.-|++....+....+..++=.+.....+++..|++.|
T Consensus 201 ~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~------- 273 (400)
T PF03825_consen 201 LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK------- 273 (400)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------
Confidence 4689999988777777776667777889999999876557777777766655555555555666666666543
Q ss_pred HHHHHHHhhHHHHHHHHHhhcc-CchHHHHHHHHH---HHh--hhhhhhcchhhh-hhccCCCchHHHHHHHhHhH-hhh
Q 021674 192 RKIMQSIGFLGPAFFLTQLSHV-DSPAMAVLCMAC---SQG--TDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAG-VLA 263 (309)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~--~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~-~lg 263 (309)
+.+ .++....++=....... ++.+........ ..+ .+.+ ....... ....+++.++++-++.+... .+|
T Consensus 274 -~ll-~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~-~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg 350 (400)
T PF03825_consen 274 -WLL-LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLF-HAASVRYIDRIAPPELRATAQGLYSALSFGLG 350 (400)
T ss_pred -HHH-HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhCCccchHHHHHHHHHHHhhHH
Confidence 122 22222221111111122 222222211111 111 1111 1111222 23346678899999888765 589
Q ss_pred hhHHHhHHHhhcccCC------chHHHHHHHHHHHHHHHHHHhh-cCCc
Q 021674 264 GVFGTAATGYILQHGS------WDDVFKVSVGLYLVGTAVWNLF-STGE 305 (309)
Q Consensus 264 g~i~~~~~g~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~ 305 (309)
+.+|..+.|++.|+.+ |...+.+.+++.++..+.+.++ .++|
T Consensus 351 ~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 351 GAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 9999999999999843 4456666666555555444444 4343
No 146
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.16 E-value=1.9e-09 Score=99.90 Aligned_cols=143 Identities=11% Similarity=0.052 Sum_probs=92.9
Q ss_pred HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-H
Q 021674 145 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-M 223 (309)
Q Consensus 145 l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 223 (309)
+.+++|.|..+.+...+...++..++.+..|+++||+|||+.. . .+..............++....++. +
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l--------~-~~~~~~~~~~~~~~~a~~~~~l~~~r~ 112 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL--------I-TGALIFTLACAATLFTTSMTQFLIARF 112 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH--------H-HHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4567899999999999999999999999999999999987421 1 1111111111111223344333222 2
Q ss_pred HHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHH
Q 021674 224 ACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 297 (309)
..+.+.+ ......+....|. ++++++.+.++.+....++..++|.+.+.+.++.+|+..|.+.+++.+++.+.
T Consensus 113 l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 113 IQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 2222221 1111112223344 44678888999999999999999999999988888999998877776666544
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.16 E-value=3.4e-09 Score=97.06 Aligned_cols=164 Identities=8% Similarity=0.040 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
..+.+++.....+......|. +++++|+|..+.++..+...++..++.++.|+++||+|||+. +. .+...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~--------~~-~~~~~ 86 (405)
T TIGR00891 17 AWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP--------MV-TSIVL 86 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--------HH-HHHHH
Confidence 344445555555555566665 567789999999999999999999999999999999997731 11 11111
Q ss_pred HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-
Q 021674 203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS- 279 (309)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~- 279 (309)
..+........++....... +..+.+.+.. ........ +..++++++.+.++.+....+|..+++.+.+.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGE-YGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhh-hHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 11111111122233322221 2222222211 11112222 23455789999999999999999999999999888744
Q ss_pred -chHHHHHHHHHHHHHHHH
Q 021674 280 -WDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~ 297 (309)
|+..|.+.+...++..+.
T Consensus 166 ~w~~~f~~~~~~~~~~~~~ 184 (405)
T TIGR00891 166 GWRALFFISILPIIFALWL 184 (405)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 988887765555544433
No 148
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.16 E-value=2.8e-08 Score=93.41 Aligned_cols=63 Identities=16% Similarity=0.289 Sum_probs=56.2
Q ss_pred cccccchhhHHHHHhccCCCc--chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhh
Q 021674 3 IGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 65 (309)
Q Consensus 3 ig~g~~~p~~~~~i~~~~p~~--~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~ 65 (309)
+|.|...|...++++|.||++ +|.+..++.+.+.++|+.++|.+.+++.+++|||+.|.+.++
T Consensus 112 iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 112 CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 466777788889999999976 799999999999999999999999999999999999997543
No 149
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.15 E-value=4.1e-09 Score=96.45 Aligned_cols=151 Identities=15% Similarity=0.050 Sum_probs=99.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674 117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~ 196 (309)
++.++.+....++...........+|.|+++ +|.|..+.|+..+...++..++.++.|+++||+|+|+. +.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~--------~~ 75 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRS--------YY 75 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH--------HH
Confidence 3456777777777777777788999999975 69999999999999999999999999999999998731 11
Q ss_pred HHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674 197 SIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 274 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l 274 (309)
.+..............++....... ...+.+.+.. .+.... ...+.++++++.+.+..+...++|..++|.+.+.+
T Consensus 76 -~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 76 -LASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMI-WVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred -HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111111111111222333332222 2222222211 111111 12334556789999999999999999999999998
Q ss_pred cccC
Q 021674 275 LQHG 278 (309)
Q Consensus 275 ~~~~ 278 (309)
.+..
T Consensus 154 ~~~~ 157 (381)
T PRK03633 154 STEL 157 (381)
T ss_pred cccc
Confidence 7753
No 150
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.14 E-value=3.9e-09 Score=97.19 Aligned_cols=154 Identities=12% Similarity=0.051 Sum_probs=98.5
Q ss_pred HHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674 133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 212 (309)
Q Consensus 133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (309)
..|.....+|.+. +++|+|+.+.++..+...++..++.++.|+++||+|||+. +. .+.............
T Consensus 35 ~~~~~~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~--------~~-~~~~~~~~~~~~~~~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMA-QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV--------VI-LFAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH--------HH-HHHHHHHHHHHHHHH
Confidence 3444445567655 5689999999999999999999999999999999997631 11 111111111111122
Q ss_pred cCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHH
Q 021674 213 VDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 290 (309)
Q Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~ 290 (309)
.++.+....+ ...+.+.+.. .+.......| .++++++.+.++.+...+++..++|.+.+.+.+..+|+..|.+.+.+
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~-~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l 183 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGF-WAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVM 183 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 2333333222 2222222211 1111222223 45678999999999999999999999999999988899999887666
Q ss_pred HHHHHHH
Q 021674 291 YLVGTAV 297 (309)
Q Consensus 291 ~~~~~~~ 297 (309)
.+++.+.
T Consensus 184 ~~~~~l~ 190 (394)
T PRK10213 184 GVLCIFW 190 (394)
T ss_pred HHHHHHH
Confidence 6555433
No 151
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=5.7e-11 Score=107.25 Aligned_cols=291 Identities=15% Similarity=0.172 Sum_probs=167.8
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc---------------CCcchhHhhhh
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---------------GWPSVFYSFGS 65 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~---------------gWr~~F~i~~~ 65 (309)
.|+|.|+.+|.+.++.+|...+++||..++.+.+-...|...|.+++-.+...+ =||-.|-+-.+
T Consensus 154 LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~v 233 (538)
T KOG0252|consen 154 LGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAV 233 (538)
T ss_pred hhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999998888888877665543211 29999997444
Q ss_pred HHHHHHHHHHhhcccCCCCCC----CCCHHHH---HHHHh-----ccCCCC-CCCCCC---hhHhhcc---hHHHHHHHH
Q 021674 66 LGTVWFTVWLSKAHSSPAEDP----QLRPAEK---KLIVS-----SCASKE-PVKTIP---WGLILSK---PPVWALIVS 126 (309)
Q Consensus 66 ~~~v~~~~~~~~~~~~p~~~~----~~~~~~~---~~~~~-----~~~~~~-~~~~~~---~~~l~~~---~~~~~~~~~ 126 (309)
++++. ..+-...||+++-+. +.+...+ +++.. +..+.. +.+... +...+.+ +.+......
T Consensus 234 pa~~~-ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~ 312 (538)
T KOG0252|consen 234 PALLV-LYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGT 312 (538)
T ss_pred HHHHH-HHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 45443 333334566554221 1000000 00000 000000 000111 1122222 223334555
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhCCCccchhh-----Hhh---hhHH-HHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 127 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGL-----FCV---LPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 127 ~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~-----~~~---~~~~-~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
.|....++|+...+.-..+++ .|+.+.+..+ ... +..+ ....|..+..+++|++||+. ...
T Consensus 313 WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~---------iq~ 382 (538)
T KOG0252|consen 313 WFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY---------IQL 382 (538)
T ss_pred HHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH---------HHH
Confidence 677778899999888888865 5887666555 111 1111 22235556778999999762 222
Q ss_pred HhhHHHHHHHHHhh-ccCchH---HHHHHHHHHHhhhhhh-hcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674 198 IGFLGPAFFLTQLS-HVDSPA---MAVLCMACSQGTDAFS-QSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAAT 271 (309)
Q Consensus 198 ~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~ 271 (309)
.++....++..... ..++.. ..+++..+...++-+. +...+....| .+.+.|++.-|+....+.+|++++....
T Consensus 383 ~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F 462 (538)
T KOG0252|consen 383 MGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF 462 (538)
T ss_pred hhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh
Confidence 33333332322222 122111 1111111111111111 1112222233 3457899999999999999999999999
Q ss_pred Hhhcc-----cCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 272 GYILQ-----HGSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 272 g~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
..+.+ ..+...++++.+++..++.++-+++.
T Consensus 463 ~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 463 LYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred hHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 99988 34677889998888888877766664
No 152
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.14 E-value=1.1e-09 Score=99.11 Aligned_cols=157 Identities=15% Similarity=0.130 Sum_probs=97.9
Q ss_pred HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc
Q 021674 134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV 213 (309)
Q Consensus 134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (309)
.|....++| ++++++|+|..+.+...+...++..++.+..|+++||+|||+.... +.....+........
T Consensus 19 ~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~---------~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 19 VYTWTLLAP-PLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAML---------GGILYGLGFTFYAIA 88 (377)
T ss_pred HhhhhhHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHH---------hHHHHHHHHHHHHHH
Confidence 444445555 4556789999999999999999999999999999999998753221 111111111111112
Q ss_pred CchHHHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674 214 DSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 292 (309)
Q Consensus 214 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 292 (309)
++....... ...+.+.+.. .........+..|++|+.+.++.+....+|..+++++.+.+.+..+|+..|.+.+++.+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 167 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIA-YGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFL 167 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHH-HHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 222222221 1222222211 11112222334467899999999998889888888888888888889999988777766
Q ss_pred HHHHHHHhh
Q 021674 293 VGTAVWNLF 301 (309)
Q Consensus 293 ~~~~~~~~~ 301 (309)
+..+....+
T Consensus 168 ~~~~~~~~~ 176 (377)
T TIGR00890 168 LVIVLGAFL 176 (377)
T ss_pred HHHHHHHHh
Confidence 655444433
No 153
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.14 E-value=4.8e-09 Score=96.25 Aligned_cols=165 Identities=13% Similarity=0.056 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
..........+.......+|.+. +++|.|..+.+...+...++..++.++.|+++||+|||+. +. .+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~--------l~-~~~~~ 77 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIA-ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV--------AI-PGAAL 77 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH--------HH-HHHHH
Confidence 33333444444455556677665 4589999999999999999999999999999999987631 11 11111
Q ss_pred HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
..+........++....... ...+.+.+.. ....+.... ..++++|+.+.+..+...+++..++|.+.+.+.+..+|
T Consensus 78 ~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~ 156 (392)
T PRK10473 78 FIIASLLCSLAETSSLFLAGRFLQGIGAGCC-YVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW 156 (392)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 11111111222233222221 2222221111 111222222 34567899999999999999999999999988888789
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 021674 281 DDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~ 298 (309)
+..|.+.+.+.+++.+..
T Consensus 157 ~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 157 QSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 988888776665555443
No 154
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.13 E-value=2.4e-09 Score=96.18 Aligned_cols=277 Identities=17% Similarity=0.154 Sum_probs=161.6
Q ss_pred chhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHH---HhhhcCCcchh-------H----hhhhHHHHHH--
Q 021674 8 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF---LIHRFGWPSVF-------Y----SFGSLGTVWF-- 71 (309)
Q Consensus 8 ~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~---l~~~~gWr~~F-------~----i~~~~~~v~~-- 71 (309)
...--.+++.+..++++-+|..+.-.....+|+++.....-. ..+.-+|.-.+ - +.+.++.+|.
T Consensus 132 s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li 211 (438)
T COG2270 132 SNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLL 211 (438)
T ss_pred hheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHH
Confidence 334455788899999999999888888888888777655422 22223454441 0 1122222221
Q ss_pred --HHHHhhcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 021674 72 --TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL 149 (309)
Q Consensus 72 --~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~ 149 (309)
+-.++..+|.++.. ..+++..++.- ++. ...++++.++++......+.++..=+.-+..+....|-.+++
T Consensus 212 ~~iPm~~~v~~~~~~~----~~~~~~l~~g~--k~L--~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~ 283 (438)
T COG2270 212 FALPMILNVHDAEKIS----SPPPTALRNGF--KEL--KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADL 283 (438)
T ss_pred HHhHHHhccccccccc----ccchHHHHHHH--HHH--HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence 11222223222111 01101010000 000 113456666776666555566555577788888889999999
Q ss_pred CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhh
Q 021674 150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGT 229 (309)
Q Consensus 150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
|+|..|..++....++.+.+|+++.|++.||++.|+.... ...+....++............++.+..+...
T Consensus 284 gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~--------~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~ 355 (438)
T COG2270 284 GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI--------GLVILSIAALYLIFLEGELDFWILGLLVGTSL 355 (438)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH--------HHHHHHHHHHHHHHccccHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999997743221 11111112221111211222222222222222
Q ss_pred hhh-hhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674 230 DAF-SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 230 ~~~-~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+.. +.+..+- .+..++++.+...|+.|..++....++|.+.+.+.|. ++-+..+.....+.+++.++....
T Consensus 356 G~~qA~SRSy~-~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 356 GGAQASSRSYL-ARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred chHHHHHHHHH-HHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence 211 1111121 2335667889999999999999999999999999887 556666666666666666554333
No 155
>TIGR00895 2A0115 benzoate transport.
Probab=99.13 E-value=2.6e-09 Score=97.41 Aligned_cols=153 Identities=16% Similarity=0.150 Sum_probs=95.0
Q ss_pred HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhcc
Q 021674 134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV 213 (309)
Q Consensus 134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (309)
.+.....+|.+ .+++|++..+.+++.....++..++.++.|+++||++||+. +. .+.....+........
T Consensus 33 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--------~~-~~~~~~~~~~~~~~~~ 102 (398)
T TIGR00895 33 LAAMGFAAPAI-SAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV--------LL-WSILLFSVFTLLCALA 102 (398)
T ss_pred HHHHHhhHHHH-hhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH--------HH-HHHHHHHHHHHHHHHc
Confidence 34444555554 45689999999999999999999999999999999997631 11 1111111111111122
Q ss_pred CchHHHHH-HHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHH
Q 021674 214 DSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 291 (309)
Q Consensus 214 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~ 291 (309)
++...... ....+.+.+ ...+...+...|. ++++++.+.++.+....+|..++|.+.+.+.+..+|+..+.+.+++.
T Consensus 103 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 181 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAP 181 (398)
T ss_pred cchHHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHH
Confidence 23322222 222222221 1112222333333 44679999999999999999999999999999888988887765444
Q ss_pred HHHHHH
Q 021674 292 LVGTAV 297 (309)
Q Consensus 292 ~~~~~~ 297 (309)
++..+.
T Consensus 182 ~~~~~~ 187 (398)
T TIGR00895 182 LLLLLL 187 (398)
T ss_pred HHHHHH
Confidence 444333
No 156
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.13 E-value=5.9e-09 Score=98.89 Aligned_cols=168 Identities=17% Similarity=0.142 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
+.+..++...-...+.+-+|.+.+ ++|.+..+.++......++..++.+..|+++||+|||+. +. .+...
T Consensus 11 ~~~~~~~~~ld~tiv~~a~p~i~~-~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~--------l~-~~~~~ 80 (495)
T PRK14995 11 IVLVYIPVAIDATVLHVAAPTLSM-TLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL--------LM-LGGTL 80 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--------HH-HHHHH
Confidence 444455555555566677888864 589999999999999999999999999999999998732 11 11111
Q ss_pred HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhh-hhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC
Q 021674 203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSN-HQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 279 (309)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~ 279 (309)
...........++....+.. ...+.+.+.. .+..... ..+. ++++|+.+.++......+|..++|.+.|.+.++.+
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~-~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMI-VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 11111112223344433332 2222222211 1112221 2333 45789999999999999999999999999999989
Q ss_pred chHHHHHHHHHHHHHHHHHHhh
Q 021674 280 WDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
|++.|++...+.+++.+....+
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988776666555443333
No 157
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=3.4e-09 Score=99.81 Aligned_cols=165 Identities=16% Similarity=0.213 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674 125 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 204 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~ 204 (309)
+..++...........+|.+. +++|.|..+.++......++..++.++.|+++||+|||+. +. .+.....
T Consensus 9 ~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~~~~~~ 78 (485)
T TIGR00711 9 LGTFMAVLDSTIVNVAIPTIA-GDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL--------FL-ISTFAFT 78 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH--------HH-HHHHHHH
Confidence 334444444445556677665 5689999999999999999999999999999999997631 11 1111111
Q ss_pred HHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH
Q 021674 205 FFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 282 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~ 282 (309)
+........++....+.. ...+.+.+.. .+.......+ .++++|+.+.++.+....+|..++|.+.|++.++.+|+.
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~ 157 (485)
T TIGR00711 79 LGSLLCGVAPNLELMIIFRVIQGFGGGPL-IPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRW 157 (485)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCcee
Confidence 111112223333332222 2222222211 1222222333 355789999999999999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 021674 283 VFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~ 300 (309)
.|++.+.+.+++.+...+
T Consensus 158 ~f~~~~~~~~~~~~~~~~ 175 (485)
T TIGR00711 158 IFLINVPIGIIVVVVAFF 175 (485)
T ss_pred hhhhhhHHHHHHHHHHHH
Confidence 988876665555443333
No 158
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.11 E-value=5.3e-09 Score=96.34 Aligned_cols=163 Identities=14% Similarity=0.129 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHH
Q 021674 126 SHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAF 205 (309)
Q Consensus 126 ~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~ 205 (309)
..++.....+......|.+. +++|+|+.+.+++.....++..++.++.|+++||+|+|+.... +.....+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~---------~~~~~~~ 92 (406)
T PRK11551 23 VALLEGLDLQSAGVAAPRMA-QEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIV---------SVALFGL 92 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH---------HHHHHHH
Confidence 33443444455555666665 5589999999999999999999999999999999998742211 1111111
Q ss_pred HHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHH
Q 021674 206 FLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV 283 (309)
Q Consensus 206 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~ 283 (309)
........++....... ...+.+.+.. .+...+...| .++++++.+.++.+....+|+.+++.+.+.+.+..+|+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 171 (406)
T PRK11551 93 FSLATAQAWDFPSLLVARLLTGVGLGGA-LPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHI 171 (406)
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 11111122333332222 2222222211 1112222233 3457899999999999999999999998888887889998
Q ss_pred HHHHHHHHHHHHHHHH
Q 021674 284 FKVSVGLYLVGTAVWN 299 (309)
Q Consensus 284 ~~~~~~~~~~~~~~~~ 299 (309)
|.+.+.+.++..+...
T Consensus 172 ~~~~~~~~~~~~~~~~ 187 (406)
T PRK11551 172 FYVGGVGPLLLVPLLM 187 (406)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8876665554443333
No 159
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.11 E-value=1.9e-09 Score=97.95 Aligned_cols=150 Identities=16% Similarity=0.201 Sum_probs=97.5
Q ss_pred HHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH
Q 021674 142 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL 221 (309)
Q Consensus 142 p~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (309)
.+++++++|+|..+.+++.+...++..++.++.|+++||+|||+.... +..............++......
T Consensus 17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 87 (399)
T TIGR00893 17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAV---------FIVIWGVFTGLQAFAGAYVSLYI 87 (399)
T ss_pred HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHH---------HHHHHHHHHHHHHHHcCHHHHHH
Confidence 344777899999999999999999999999999999999997753221 11111111111111223332222
Q ss_pred H-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHH
Q 021674 222 C-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
. ...+.+.+.. .+.......|. ++++|+.+.++.+...++|..++|.+.+.+.++.+|+..|.+.+++.++..+...
T Consensus 88 ~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 88 LRVLLGAAEAPF-FPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HHHHHHHHHHhh-hhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh
Confidence 2 2222222211 12222223343 4568999999999999999999999999999988899999887776665555444
Q ss_pred hh
Q 021674 300 LF 301 (309)
Q Consensus 300 ~~ 301 (309)
++
T Consensus 167 ~~ 168 (399)
T TIGR00893 167 KF 168 (399)
T ss_pred he
Confidence 43
No 160
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.09 E-value=9.2e-10 Score=99.66 Aligned_cols=163 Identities=13% Similarity=0.017 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674 128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL 207 (309)
Q Consensus 128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~ 207 (309)
++.+.....+...+| ++++++|+|..+.+++.+...++..++.++.|+++||++||+.... +.....+..
T Consensus 5 ~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~---------~~~~~~~~~ 74 (379)
T TIGR00881 5 AAYYLVRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPI---------GLILCAIVN 74 (379)
T ss_pred hHHHHhHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHH---------HHHHHHHHH
Confidence 333344555556666 5667789999999999999999999999999999999998753211 111111111
Q ss_pred HHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHh-HHHhhcccCCchHHH
Q 021674 208 TQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTA-ATGYILQHGSWDDVF 284 (309)
Q Consensus 208 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~-~~g~l~~~~~~~~~~ 284 (309)
......++....++. ...+.+.+ ...+...+...+. ++++++.+.++.+....+|+.++|. +.+.+.+..+|+..|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 153 (379)
T TIGR00881 75 LFFGFSTSLWVMAALWALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVF 153 (379)
T ss_pred HHHHHhhhHHHHHHHHHHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHH
Confidence 111122233222222 22222221 1122222223333 4467899999999999999999994 656666667899888
Q ss_pred HHHHHHHHHHHHHHHhh
Q 021674 285 KVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 285 ~~~~~~~~~~~~~~~~~ 301 (309)
.+.+.+.++..+....+
T Consensus 154 ~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 154 IVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHHHHHhee
Confidence 87776665554444433
No 161
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=7.9e-09 Score=95.32 Aligned_cols=152 Identities=13% Similarity=0.007 Sum_probs=93.2
Q ss_pred HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674 137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP 216 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (309)
+..-+|. +++++|.|..+.+...+...++..++.++.|+++||++||+. +. .+.....+........++.
T Consensus 32 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~--------l~-~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK15402 32 IQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPV--------ML-AGVAFFILTCLAILLAQSI 101 (406)
T ss_pred HhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH--------HH-HHHHHHHHHHHHHHHHccH
Confidence 3334454 446789999999999999999999999999999999987631 11 1111111111111122233
Q ss_pred HHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHH
Q 021674 217 AMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 294 (309)
Q Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 294 (309)
...... ...+.+.+.. .+.......| .+++++..+.++.+....++..++|.+.+.+.++.+|+..|.+.+++.+++
T Consensus 102 ~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~ 180 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFI-GAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALS 180 (406)
T ss_pred HHHHHHHHHHHhHhhhH-HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHH
Confidence 322222 2222221111 1111222223 345667777888888888889999999999999888999998877776666
Q ss_pred HHHHH
Q 021674 295 TAVWN 299 (309)
Q Consensus 295 ~~~~~ 299 (309)
.+...
T Consensus 181 ~~~~~ 185 (406)
T PRK15402 181 FFGLW 185 (406)
T ss_pred HHHHH
Confidence 54433
No 162
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.08 E-value=4.3e-09 Score=94.06 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
.....++.....+......|.+.++ +|.+..+.+.......++..++.++.|+++||++||+... .+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~---------~~~~~ 73 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLL---------LGLLL 73 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhH---------HHHHH
Confidence 3445556666677788888888865 6999999999999999999999999999999998775211 11111
Q ss_pred HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
..+........++....... ...+.+.+ ...+...+...|. ++++|+.+.+..+...++|..++|.+.+.+.++.+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (352)
T cd06174 74 FALGSLLLAFASSLWLLLVGRFLLGLGGG-ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW 152 (352)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHcccc-cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 11111111112233322222 22222211 1112222223333 446899999999999999999999999999998889
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 021674 281 DDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~ 298 (309)
+..+.+.+.+.+++.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 153 RWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 988888777766665443
No 163
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.08 E-value=5e-09 Score=98.23 Aligned_cols=156 Identities=12% Similarity=0.054 Sum_probs=88.6
Q ss_pred HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh-ccCc
Q 021674 137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-HVDS 215 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 215 (309)
+..++| +++++ |+|..+.++..+...++..++.++.|+++||+|+|+..... .+......+...... ..++
T Consensus 48 ~~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~------~~~~~i~~~~~~~~~~~~~~ 119 (452)
T PRK11273 48 FALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG------LILAAAVMLFMGFVPWATSS 119 (452)
T ss_pred HHHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHH------HHHHHHHHHHHHhhhccccc
Confidence 345566 56666 99999999999999999999999999999999987421110 011111111111111 1112
Q ss_pred hHHHHH-HHHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhhhhHHHhHH-HhhcccCCchHHHHHHHHHHH
Q 021674 216 PAMAVL-CMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT-GYILQHGSWDDVFKVSVGLYL 292 (309)
Q Consensus 216 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~-g~l~~~~~~~~~~~~~~~~~~ 292 (309)
...... ....+.+.+ ...+..... .+..++++++.+.++.|...++|+.+.+.+. ..+....+|+..|++.+.+.+
T Consensus 120 ~~~~~~~~~l~gi~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 120 IAVMFVLLFLCGWFQG-MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred HHHHHHHHHHHHHHHh-ccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 222222 222222221 111111111 2234567899999999999998875544443 333333589999988766655
Q ss_pred HHHHHHHhh
Q 021674 293 VGTAVWNLF 301 (309)
Q Consensus 293 ~~~~~~~~~ 301 (309)
+..++..++
T Consensus 199 ~~~~l~~~~ 207 (452)
T PRK11273 199 LVALFAFAM 207 (452)
T ss_pred HHHHHHHHH
Confidence 544443333
No 164
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.08 E-value=1e-08 Score=97.10 Aligned_cols=160 Identities=7% Similarity=0.037 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
+.+..++...........+|. +++++|+|..+.+.......++..++.++.|+++||+|||+. +. .+...
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~~~~ 94 (496)
T PRK03893 25 AWLGYLLDGFDFVLITLVLTE-VQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA--------MV-ISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH--------HH-HHHHH
Confidence 344444444444444455554 556789999999999999999999999999999999997631 11 11111
Q ss_pred HHHHHHHhhccCchHHH-HHHHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 203 PAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 203 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
.++........++.... +.....+++.+.. ........ +..++++++.+.++.+...++|..++|.+.+.+.++.+|
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGE-YGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 11111111112222222 2222222222111 11111222 234556789999999999999999999999999998899
Q ss_pred hHHHHHHHHHHHH
Q 021674 281 DDVFKVSVGLYLV 293 (309)
Q Consensus 281 ~~~~~~~~~~~~~ 293 (309)
+..|.+.+...++
T Consensus 174 ~~~f~~~~~~~~~ 186 (496)
T PRK03893 174 RALFFIGILPIIF 186 (496)
T ss_pred HHHHHHHHHHHHH
Confidence 9988765444433
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.08 E-value=9e-09 Score=95.42 Aligned_cols=158 Identities=11% Similarity=0.072 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
..+.++......+.....+| ++++++|.|..+.++......++..++.++.|+++||+|||+. +. .+...
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~--------l~-~~~~~ 92 (426)
T PRK12307 23 AWLGYVFDGFDFMLIFYIMY-LIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL--------MM-WSIVA 92 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH--------HH-HHHHH
Confidence 33444444444444444444 4567789999999999999999999999999999999997631 11 11111
Q ss_pred HHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 203 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
..+........++......+ ...+.+.+.. .+.......| .++++|+.+.++.+....+|..+++.+.+.+.+..+|
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGE-YACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 11111111122223222222 2223222211 1111122223 3557799999999999999999999999999888889
Q ss_pred hHHHHHHHHHH
Q 021674 281 DDVFKVSVGLY 291 (309)
Q Consensus 281 ~~~~~~~~~~~ 291 (309)
+..|.+.....
T Consensus 172 ~~~f~i~~~~~ 182 (426)
T PRK12307 172 RAAFFVGLLPV 182 (426)
T ss_pred HHHHHHHHHHH
Confidence 99887754433
No 166
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.06 E-value=1e-08 Score=94.29 Aligned_cols=155 Identities=19% Similarity=0.213 Sum_probs=97.3
Q ss_pred HHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC
Q 021674 135 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD 214 (309)
Q Consensus 135 ~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (309)
+.....+|... +++|+|..+.++..+...++..++.+..|+++||+|||+. + ..+....++........+
T Consensus 26 ~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~--------l-~~~~~l~~~~~~~~~~a~ 95 (393)
T PRK09705 26 TSVGPLLPQLR-QASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS--------V-AISLLLIAVGALMRELYP 95 (393)
T ss_pred hccchhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH--------H-HHHHHHHHHHHHHHHHCc
Confidence 44556676554 6789999999999999999999999999999999998742 1 122222222222222333
Q ss_pred chHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHH
Q 021674 215 SPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYL 292 (309)
Q Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~ 292 (309)
+....+. -...+.+.+.. .........+..|++++.+.++.+....+|+.+++.+.+.+.++ .+|+..+...+...+
T Consensus 96 ~~~~ll~~r~l~Gig~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~ 174 (393)
T PRK09705 96 QSALLLSSALLGGVGIGII-QAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAV 174 (393)
T ss_pred chHHHHHHHHHHHhHHHHH-hhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3333222 22223332221 11112222334467889999999988889999999999998887 479887665444444
Q ss_pred HHHHHHHh
Q 021674 293 VGTAVWNL 300 (309)
Q Consensus 293 ~~~~~~~~ 300 (309)
+..+.+..
T Consensus 175 ~~~~~~~~ 182 (393)
T PRK09705 175 VALFAWWW 182 (393)
T ss_pred HHHHHHHH
Confidence 44433333
No 167
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.06 E-value=6.5e-09 Score=95.22 Aligned_cols=163 Identities=10% Similarity=-0.007 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH
Q 021674 122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 201 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~ 201 (309)
.+...+++...+.-....++|.|+++ +|+|..+.|...+...+...++.++.|.++||++|+. . .++.+. .+..
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~---~-~~~~~~-~~~~ 81 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHII---I-ALRLLA-LASA 81 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH---H-HHHHHH-HHHH
Confidence 34455566555555666889999965 7999999999999999999999999999999987531 1 111111 1111
Q ss_pred HHHHHHHHhhccCchHHHHHHHH-HHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 202 GPAFFLTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
...... ....++.+..++... .+.+... ..+...+...+ ..++++.+.+.....+.+|..++|.+.|.+.++.+|
T Consensus 82 l~~~~~--~~~~~~~~~l~~~~~l~~~~~~~-~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~ 157 (382)
T TIGR00902 82 IFAAAF--SAGAHNAWLLFIAIGLFALFFSA-GMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDE 157 (382)
T ss_pred HHHHHH--HHhhhhHHHHHHHHHHHHHHHcc-chhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 111111 112233333222211 1111111 11111111122 235677788888999999999999999999999889
Q ss_pred hHHHHHHHHHHHHH
Q 021674 281 DDVFKVSVGLYLVG 294 (309)
Q Consensus 281 ~~~~~~~~~~~~~~ 294 (309)
+..|.+...+.++.
T Consensus 158 ~~~f~~~~~~~~~~ 171 (382)
T TIGR00902 158 QNILAILTAGLAFM 171 (382)
T ss_pred hHHHHHHHHHHHHH
Confidence 98887765543333
No 168
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.05 E-value=5.7e-09 Score=96.03 Aligned_cols=170 Identities=14% Similarity=0.088 Sum_probs=105.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674 117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~ 196 (309)
+|+++.+....++...+......-+|.+. +++|.+..+.+.......+...+..++.|+++||++||+......
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~----- 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALL-KELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIAN----- 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHH-----
Confidence 45566667777776666555555566554 567888889999999999999999999999999999885332210
Q ss_pred HHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 197 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
.......+... . ..++ .+.-...+.+.+ ...+...+...| .++++++.+.++.+....++..+||.+.|.+.
T Consensus 76 -~~~~~~~~~~~-~--~~~~--~~~r~l~G~~~a-~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 76 -GIKLLGCLLML-F--GIHP--LLAYGLVGIGAA-AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred -HHHHHHHHHHH-H--HHHH--HHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 1 1112 111111222211 112222333334 35578999999999999999999999999999
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHh
Q 021674 276 QHGSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
+.. |...+.+.+.+++++.+....
T Consensus 149 ~~~-~~~~~~i~~~~~~~~~~~~~~ 172 (393)
T PRK11195 149 DPH-AEAALAVCALIYLLAALFNLF 172 (393)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 864 666666655555545444333
No 169
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.05 E-value=5.8e-09 Score=95.01 Aligned_cols=154 Identities=14% Similarity=0.095 Sum_probs=97.6
Q ss_pred HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCc
Q 021674 136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS 215 (309)
Q Consensus 136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (309)
.....+|.+.+ ++|+|+.+.++..+...++..++.++.|+++||++||+. +. .+.+...+........++
T Consensus 9 ~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--------~~-~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 9 MYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV--------IL-GGTLVFALAAVACALAQT 78 (377)
T ss_pred HHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH--------HH-HHHHHHHHHHHHHHHHcc
Confidence 34456677765 589999999999999999999999999999999986531 11 111111111111112223
Q ss_pred hHHHHH-HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHH
Q 021674 216 PAMAVL-CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV 293 (309)
Q Consensus 216 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~ 293 (309)
...... ....+.+.+.. .....+...+ .++++++.+.++.+....+|..++|.+.+.+.+..+|+..|.+.+.+.++
T Consensus 79 ~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAA-SVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAIL 157 (377)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 322222 22222222211 1112222233 34567999999999999999999999999999887899988877666665
Q ss_pred HHHHHHh
Q 021674 294 GTAVWNL 300 (309)
Q Consensus 294 ~~~~~~~ 300 (309)
..+....
T Consensus 158 ~~~~~~~ 164 (377)
T PRK11102 158 AAALVFF 164 (377)
T ss_pred HHHHHHH
Confidence 5444333
No 170
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.04 E-value=8.2e-09 Score=94.53 Aligned_cols=159 Identities=10% Similarity=-0.039 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH
Q 021674 127 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF 206 (309)
Q Consensus 127 ~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~ 206 (309)
+++...+...+..++|.|+++ +|.|..+.|...+...+...++.++.|.++||++||... ++.+..... .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~----~~~~~~~~~-~~~~~ 86 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA----LRLLALLTL-LFAVA 86 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH----HHHHHHHHH-HHHHH
Confidence 455555566677899999966 699999999999999999999999999999999874210 111211111 11111
Q ss_pred HHHhhccCchHHHHHHHH-HHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHH
Q 021674 207 LTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK 285 (309)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~ 285 (309)
. ....++.+....... .+.+.+ ...+...+...+. .++++.+.+..+..+++|..++|.+.|.+.++.+|+..|+
T Consensus 87 ~--~~~~~~~~~l~i~~~l~g~~~~-~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~ 162 (382)
T PRK11128 87 F--WFGAHSFWLLFVAIGLFNLFFS-PLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILW 162 (382)
T ss_pred H--HHhcccHHHHHHHHHHHHHHHc-ccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 1 112233332222211 222111 1111111111222 2335555666777788999999999999999988999888
Q ss_pred HHHHHHHHHH
Q 021674 286 VSVGLYLVGT 295 (309)
Q Consensus 286 ~~~~~~~~~~ 295 (309)
+.++..++..
T Consensus 163 ~~~~~~~~~~ 172 (382)
T PRK11128 163 ILTAGVASML 172 (382)
T ss_pred HHHHHHHHHH
Confidence 7665554443
No 171
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.01 E-value=1.1e-08 Score=96.14 Aligned_cols=152 Identities=11% Similarity=0.059 Sum_probs=97.1
Q ss_pred HHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC
Q 021674 135 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD 214 (309)
Q Consensus 135 ~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (309)
+.+..++|.+. +++|.|..+.++......+...++.++.|+++||++||+.. . .+..............+
T Consensus 36 ~~~~~~~~~i~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l--------~-~~~~~~~~~~~~~~~~~ 105 (455)
T TIGR00892 36 KAVTVFFKELQ-QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV--------I-AGGLLASLGMILASFSS 105 (455)
T ss_pred cchhhhHHHHH-HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH--------H-hhHHHHHHHHHHHHHhh
Confidence 34556677655 56899999999999888888899999999999999977421 1 11111111111111222
Q ss_pred chHHHHH-H-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674 215 SPAMAVL-C-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 292 (309)
Q Consensus 215 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 292 (309)
+...... . +..+.+.+... ........+..+++|+.+.++.+....+|+.++|.+.+.+.+..+|+..|.+.+++.+
T Consensus 106 ~~~~l~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~ 184 (455)
T TIGR00892 106 NVIELYLTAGFITGLGLAFNF-QPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLL 184 (455)
T ss_pred hHHHHHHHHHHHHHhcchhhh-hHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 2222211 1 12222222111 1122222233467899999999999999999999999999998889999998877766
Q ss_pred HHHHH
Q 021674 293 VGTAV 297 (309)
Q Consensus 293 ~~~~~ 297 (309)
++.+.
T Consensus 185 ~~~v~ 189 (455)
T TIGR00892 185 HCCVC 189 (455)
T ss_pred HHHHH
Confidence 55443
No 172
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.99 E-value=1.4e-08 Score=91.16 Aligned_cols=177 Identities=16% Similarity=0.216 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
+++|.... ++..++..+.+..=+-+++.+++|+|+.|.+++.+++.+.+.+..+.-|.+.||+|.|++. .+..
T Consensus 14 ~~L~~S~~-af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~------~~s~ 86 (417)
T COG2223 14 RNLWLSTL-AFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT------ILSM 86 (417)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH------HHHH
Confidence 34444333 3333444555555566777899999999999999999999999999999999999987421 1111
Q ss_pred HhhHHHHHHHHHhhccCch-HHHHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 198 IGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
+.++.+++........++. ...++.+.++.+.+.++.+ .++... .+|+..|.|.|++. .+|+|..+.+.+...++
T Consensus 87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~--m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~ 163 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVG--MPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA 163 (417)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcc--cccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence 2222233332222222211 2222333333333323222 222333 45678999999877 99999999999988888
Q ss_pred ccCC---chHHHHHHHHHHHHHHHHHHhhcCC
Q 021674 276 QHGS---WDDVFKVSVGLYLVGTAVWNLFSTG 304 (309)
Q Consensus 276 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (309)
...+ |+.+..+.+...++.++...+..++
T Consensus 164 ~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 164 VAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8766 8888877777777766665555433
No 173
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.97 E-value=5.3e-08 Score=88.06 Aligned_cols=174 Identities=18% Similarity=0.112 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHH
Q 021674 119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~ 198 (309)
+.+.+.+..|+....=+...--+|..-+ ++|.|..++|.+.+...++..+++++-..++||+.||++...
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~-dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~--------- 83 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAA-DLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG--------- 83 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH---------
Confidence 4556677777777777788888888775 589999999999999999999999999999999988742211
Q ss_pred hhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 199 GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
.+..............+....+.. ...+...+.+..........-.+|++++.|.+++++.-.++..+|.+++.++-|.
T Consensus 84 ~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~ 163 (394)
T COG2814 84 LLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL 163 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 111111111111122233222221 1122222222111111122335778999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 278 GSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
-||+..|++.+++.+++.+......
T Consensus 164 ~GWR~~F~~ia~l~ll~~~~~~~~l 188 (394)
T COG2814 164 FGWRATFLAIAVLALLALLLLWKLL 188 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8999999998888777765444443
No 174
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=5e-08 Score=90.81 Aligned_cols=146 Identities=10% Similarity=0.044 Sum_probs=81.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674 117 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~ 196 (309)
+|+++...+..+......+....-.|.+-++++|+|..|.+++.+.+.++..+..+..|++.||+|.|+.. .
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~--------~ 104 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT--------V 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--------H
Confidence 34555555554443333333334444444557999999999999999999999999999999999976311 1
Q ss_pred HHhhHHHHHHHHHhhc-----cCchHHHH-HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674 197 SIGFLGPAFFLTQLSH-----VDSPAMAV-LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTA 269 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~ 269 (309)
++.....+....... .++....+ .....+.+. ...........+ .+++++|.+.|+....+++|..+++.
T Consensus 105 -~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg--~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 105 -FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAG--ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred -HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHH--HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 111111111111111 12322222 222233321 122222222333 45578999999987777777776655
Q ss_pred HHHh
Q 021674 270 ATGY 273 (309)
Q Consensus 270 ~~g~ 273 (309)
+...
T Consensus 182 l~p~ 185 (462)
T PRK15034 182 VAPL 185 (462)
T ss_pred HHHH
Confidence 5544
No 175
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.96 E-value=8.3e-08 Score=88.89 Aligned_cols=165 Identities=9% Similarity=0.033 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~ 202 (309)
+...++............+|.+ ++++|+|..+.|++.+...++..++++..|++.||+|+|+. + ..+...
T Consensus 8 ~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~--------~-~~g~~l 77 (410)
T TIGR00885 8 ITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG--------I-LLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH--------H-HHHHHH
Confidence 3333443333332333555544 77899999999999999999999999999999999997631 1 111111
Q ss_pred HHHHHH---HhhccCchHHHH-HHHHHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 203 PAFFLT---QLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 203 ~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
.+.... .....++....+ ..+..+.+.+.. .+...+... ..++++++...++.+...++|..++|.+.+.+...
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111111 111122222222 222233333222 111112222 23456688889999999999999999998887532
Q ss_pred --------------------------CCchHHHHHHHHHHHHHHHHH
Q 021674 278 --------------------------GSWDDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 278 --------------------------~~~~~~~~~~~~~~~~~~~~~ 298 (309)
.+|+..|.+.+.+.++..+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 157 NLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 248888877666655544443
No 176
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.96 E-value=5.5e-08 Score=95.69 Aligned_cols=147 Identities=19% Similarity=0.178 Sum_probs=88.8
Q ss_pred HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHH
Q 021674 139 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM 218 (309)
Q Consensus 139 ~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (309)
..+| .+++.+|++..+.+++.+...++..++.++.|+++||+|||+.. . .+++...+........++...
T Consensus 188 ~ilp-~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l--------i-i~lil~~i~~ll~afa~s~~~ 257 (742)
T TIGR01299 188 FVLP-SAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL--------L-ICLSVNGFFAFFSSFVQGYGF 257 (742)
T ss_pred HHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--------H-HHHHHHHHHHHHHHHHhhHHH
Confidence 4444 45567899999999999999999999999999999999987421 1 111111111111111222222
Q ss_pred H-HHHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-------------CCchHH
Q 021674 219 A-VLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-------------GSWDDV 283 (309)
Q Consensus 219 ~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-------------~~~~~~ 283 (309)
. +.-+..+++.+.. .+.......+. +++.|+...+..++...+|+.+++.+...++.+ .+|+..
T Consensus 258 llv~R~l~G~g~g~~-~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l 336 (742)
T TIGR01299 258 FLFCRLLSGFGIGGA-IPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVF 336 (742)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHH
Confidence 2 2222233333221 12222333344 457899999999999999999998877665532 257777
Q ss_pred HHHHHHHHHHHHH
Q 021674 284 FKVSVGLYLVGTA 296 (309)
Q Consensus 284 ~~~~~~~~~~~~~ 296 (309)
+.+.+...+++.+
T Consensus 337 ~~i~~lp~ll~ll 349 (742)
T TIGR01299 337 VIVCAFPCVFAIG 349 (742)
T ss_pred HHHHHHHHHHHHH
Confidence 7766655554443
No 177
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.94 E-value=3.5e-08 Score=93.71 Aligned_cols=182 Identities=13% Similarity=0.128 Sum_probs=117.4
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHH
Q 021674 114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRK 193 (309)
Q Consensus 114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~ 193 (309)
-+|||.+..++...+..+.+.+....=++-+..+ ..-|+...+++.....+-..+.++.+|.++||+.||+..+..-
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~-- 82 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ-- 82 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH--
Confidence 4788888888888888888776666555555543 4677888899888888899999999999999998775332210
Q ss_pred HHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhh-hhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHH
Q 021674 194 IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGT-DAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAAT 271 (309)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~ 271 (309)
.+..+.. ..+.........+++..+. +.+..++ .++..+...+...+. ++++...|.++++...++...+||.+.
T Consensus 83 ~~~~~~~--~~L~~l~~~~~~~~~~Ll~-~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 83 LLRALVA--LLLAVLAFFGLLSPWLLLI-LTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred HHHHHHH--HHHHHHHHhCcCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH
Confidence 0111100 1111111112223332222 2222222 233334444444454 445778889999999999999999999
Q ss_pred HhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 272 GYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 272 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
|.++...|...+|.+-+.++++..+....+
T Consensus 160 G~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 160 GILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999988777888888888877765554444
No 178
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.93 E-value=3.6e-08 Score=89.26 Aligned_cols=146 Identities=21% Similarity=0.215 Sum_probs=90.9
Q ss_pred HHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchH
Q 021674 138 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA 217 (309)
Q Consensus 138 ~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (309)
...+|.+ ++++|+|..+.++..+...++..++.+..|+++||+++|+. +. .+........... ..++..
T Consensus 20 ~~~lp~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--------~~-~~~~~~~~~~~~~-~~~~~~ 88 (355)
T TIGR00896 20 GPLLPQI-RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERS--------VA-AGLLLIAAGILIR-SAPGTA 88 (355)
T ss_pred cccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHH--------HH-HHHHHHHHHHHHH-HhccHH
Confidence 3456654 45789999999999999999999999999999999997742 11 1111111111111 222333
Q ss_pred HHHHH-HHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC--CchHHHHHHHHHHHHH
Q 021674 218 MAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG--SWDDVFKVSVGLYLVG 294 (309)
Q Consensus 218 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~--~~~~~~~~~~~~~~~~ 294 (309)
..+.. ...+.+.+.. .........+..+++++.+.++.+...++|..+++.+.+.+.++. +|+..|...+.+.+++
T Consensus 89 ~l~~~~~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 89 LLFAGTALIGVGIAII-NVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHHHH-hccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 22211 2222222211 111112223445678999999999999999999999999888763 3888776655544444
Q ss_pred H
Q 021674 295 T 295 (309)
Q Consensus 295 ~ 295 (309)
.
T Consensus 168 ~ 168 (355)
T TIGR00896 168 L 168 (355)
T ss_pred H
Confidence 3
No 179
>PRK10133 L-fucose transporter; Provisional
Probab=98.93 E-value=1.6e-07 Score=87.75 Aligned_cols=144 Identities=11% Similarity=0.096 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhh
Q 021674 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 200 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~ 200 (309)
..+...++............+|.+ ++++|.|+.+.++......++..++.+..|+++||+|+|+.. . .+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l--------~-~g~ 98 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI--------I-TGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--------H-HHH
Confidence 334444454445555666777776 888999999999999999999999999999999999987321 1 111
Q ss_pred HHHHHHHHH---hhccCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCC-chHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 201 LGPAFFLTQ---LSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 201 ~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
...++.... ....++....+. .+..+.+.+.. .........+.+++ ++....+..+....+|..++|.+.+.+.
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 112223332222 22233333222 11122222234444 4555688889999999999998877654
No 180
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.91 E-value=6e-08 Score=101.00 Aligned_cols=182 Identities=14% Similarity=0.092 Sum_probs=101.0
Q ss_pred HhhcchHHHHHHHHHHHHHHHHHH----HHHhHHHHHHHHhCCCc-cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674 113 LILSKPPVWALIVSHFCHNWGTFI----LLTWMPTYYNQVLHFNL-TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 187 (309)
Q Consensus 113 ~l~~~~~~~~~~~~~~~~~~~~~~----~~~wlp~~l~~~~g~s~-~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~ 187 (309)
.++|+++++.++...++...+.+. +..+.+..+.+..+.+. ...++..+...+...+.++++|+++||++||+..
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 466777776666665555444322 22222222322222222 3356667777888999999999999999987421
Q ss_pred hhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHH-HHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhh
Q 021674 188 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-ACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGV 265 (309)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~ 265 (309)
.. +............... ..++.+..+++. ..+.+. ++..+...+...+ .++++++.+.++.++..++|..
T Consensus 86 ~~-----~~~~~~~~~~~~~~~~-~~~s~~~l~~~~~l~gi~~-a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~ 158 (1140)
T PRK06814 86 KI-----LKFAEIGIAALAIYGF-HLNSVPLLFAALFLMGIHS-ALFGPIKYSILPDHLNKDELLGANALVEAGTFIAIL 158 (1140)
T ss_pred HH-----HHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHH-HhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHH
Confidence 00 0111111111111111 112333322222 222221 2222223333333 4557789999999999999999
Q ss_pred HHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 266 FGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 266 i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+||.++|++.+..+|...|...+.+.+++.+.+..+
T Consensus 159 igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 159 LGTIIGGLATISGNFVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999889888855554454444444433
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.88 E-value=1.4e-07 Score=87.02 Aligned_cols=164 Identities=10% Similarity=0.033 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-----HHcCCChhhHHHHHHHHhhH
Q 021674 127 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVTTVRKIMQSIGFL 201 (309)
Q Consensus 127 ~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-----~~r~~~~~~~~~~~~~~~~~ 201 (309)
++.......-...-+|.||++ .|+|..+.|++..+... .+..++.|+++||+ |||+.. +. .+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~-------l~-~~~~ 76 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW-------LL-LTQV 76 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhH-------HH-HHHH
Confidence 444444555566789999986 59999999998766554 58889999999999 555321 11 1111
Q ss_pred HH--HHHHHHhhcc-CchHHHHHHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 202 GP--AFFLTQLSHV-DSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 202 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
.. +......... ++.+....+................+...+ .++++|+.+.++......+|..+++.+.+.+.+.
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 11 1111111111 122222211111111111111111122223 4556799999999988889999999999999886
Q ss_pred -CCchHHHHHHHHHHHHHHHHHHhh
Q 021674 278 -GSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
.+|+..|++.+++.+++.+.....
T Consensus 157 ~~gw~~~f~i~a~~~l~~~l~~~~~ 181 (402)
T PRK11902 157 VLGWGNTYLLMAGLMLAGALTTLWA 181 (402)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 589999988777766655543333
No 182
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.87 E-value=1.5e-08 Score=95.40 Aligned_cols=159 Identities=15% Similarity=0.023 Sum_probs=93.7
Q ss_pred HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674 137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP 216 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (309)
+..-+|. +++++|+|..+.|++.+...++..++.++.|+++||+|+|+..... +...+..............++.
T Consensus 48 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~----~~~~~~~~~~~~~~~~~~~~~~ 122 (467)
T PRK09556 48 FKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFL----LILSAICMLGFGASLGSGSVSL 122 (467)
T ss_pred hhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHH----HHHHHHHHHHHHHHHhcccchH
Confidence 4444665 5567899999999999999999999999999999999987522110 0011111111111111112222
Q ss_pred HHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHH
Q 021674 217 AMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLY 291 (309)
Q Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~ 291 (309)
...+.+ ...+.+.+ ...+.......+ .+++++|.+.++.+...++|+.+++.+..++.+. ++|+..|.+.+.+.
T Consensus 123 ~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~ 201 (467)
T PRK09556 123 GLMIALWALSGFFQS-TGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA 201 (467)
T ss_pred HHHHHHHHHHHHHHh-ccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH
Confidence 222222 22222211 112222233333 4567899999999999999999999888776654 25887777755555
Q ss_pred HHHHHHHHhh
Q 021674 292 LVGTAVWNLF 301 (309)
Q Consensus 292 ~~~~~~~~~~ 301 (309)
++..+++.++
T Consensus 202 ~~~~i~~~~~ 211 (467)
T PRK09556 202 LIIGFIGLRY 211 (467)
T ss_pred HHHHHHHHHh
Confidence 5444444444
No 183
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.84 E-value=2.3e-07 Score=87.91 Aligned_cols=174 Identities=10% Similarity=0.034 Sum_probs=105.2
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-----HHcCCChh
Q 021674 115 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVT 189 (309)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-----~~r~~~~~ 189 (309)
.++++.+.+...++......+.....+|.++++ .|.|..+.+....+. ... +++++.|.++||+ |||+.+
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~~~-~~~-~~~~l~gpl~Dr~~~~~~Grrr~~-- 83 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSLVG-QAY-VFKFLWSPLMDRYTPPFLGRRRGW-- 83 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHH-HHH-HHHHHHHHHHHcccccCCCCchHH--
Confidence 455566666666666666777777889999876 499999999874322 222 6889999999998 765421
Q ss_pred hHHHHHHHHhhHHHHHH--HHHhh-ccCchHHHH-HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhh
Q 021674 190 TVRKIMQSIGFLGPAFF--LTQLS-HVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAG 264 (309)
Q Consensus 190 ~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg 264 (309)
+ ..+.+..+.. ..... ..++..... .....+++.. .......+...| .++++++.+.++.+...++|.
T Consensus 84 -----l-l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a-~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ 156 (491)
T PRK11010 84 -----L-LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSA-SQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM 156 (491)
T ss_pred -----H-HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH
Confidence 1 1111111111 11111 112222222 1121222111 111111122223 455789999999999999999
Q ss_pred hHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHh
Q 021674 265 VFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 265 ~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
.+++.+.+++.++ .+|+..|++.+++.++..+...+
T Consensus 157 llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 157 LVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999984 68999999877776666544433
No 184
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.83 E-value=4.9e-08 Score=91.76 Aligned_cols=145 Identities=15% Similarity=0.156 Sum_probs=92.7
Q ss_pred HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhhccCchHHHHH-HHH
Q 021674 148 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLSHVDSPAMAVL-CMA 224 (309)
Q Consensus 148 ~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~ 224 (309)
+++++..+.|.+.+...++..++.+.+|+++||+++|+.... +.+...+. +.......+....+. -+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGI---------GMFLSSVISIVIPWAAGGGIALVVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHH---------HHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 578999999999999999999999999999999998742211 11111111 110111111222111 122
Q ss_pred HHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 225 CSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
.+.+.+ ...+.......+. ++++|+.+.++.+...++|..++|.+.+.+.+. .+|+..|.+.+++.++..+.+..+.
T Consensus 141 ~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 141 QGLAQG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred HHHhcc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence 222211 1112222223333 457899999999999999999999999999988 5999999887776665555555543
No 185
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.82 E-value=9.1e-08 Score=73.67 Aligned_cols=132 Identities=17% Similarity=0.154 Sum_probs=78.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH-HHHHHHhhhhhhhcchh
Q 021674 160 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLY 238 (309)
Q Consensus 160 ~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 238 (309)
.....++..++.+..|++.||++||+.. . ................++...... ....+.+.+.. .+...
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 73 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVL--------L-VGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFA-LVAGA 73 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHH--------H-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-HHhHH
Confidence 4456678889999999999999876321 1 111111111111112233332222 22222222211 11222
Q ss_pred hhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 239 SNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 239 ~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
....| .++++++.+.++.+...+++..++|.+.+.+.+..+|+..+.+...+.+++.+....+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 22233 3456799999999999999999999999999988889888887766666655444443
No 186
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.82 E-value=1.6e-07 Score=87.68 Aligned_cols=136 Identities=13% Similarity=0.034 Sum_probs=81.7
Q ss_pred ccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch-HHHHHHHHHHHhhhh
Q 021674 153 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDA 231 (309)
Q Consensus 153 ~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 231 (309)
..+.+.+.+...++..++.++.|+++||+|||+... ...+................+. ...+.-...+.+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 143 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL------IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGI 143 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH------HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhH
Confidence 788999999999999999999999999999873211 0011111111111111111111 121222222222221
Q ss_pred hhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHH---HhhcccCCchHHHHHHHHHHHHHH
Q 021674 232 FSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAAT---GYILQHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 232 ~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~---g~l~~~~~~~~~~~~~~~~~~~~~ 295 (309)
. .........| .++++|+.+.++.+....+|..+++.+. +...+..+|+..|.+.+...++..
T Consensus 144 ~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~ 210 (481)
T TIGR00879 144 A-SALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF 210 (481)
T ss_pred H-HhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 1 1222222333 3567899999999999999999999998 666566789999888555544443
No 187
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.80 E-value=6.9e-08 Score=89.78 Aligned_cols=161 Identities=16% Similarity=0.119 Sum_probs=94.1
Q ss_pred HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH----HcCCChhhHHHHHHHHhhHHHHHH
Q 021674 131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV----SKGLSVTTVRKIMQSIGFLGPAFF 206 (309)
Q Consensus 131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~----~r~~~~~~~~~~~~~~~~~~~~~~ 206 (309)
+.....+.+|++.|++++.|+|+.+.|.+.+...+...+..++.|+++||.+ |||. ++..+....++.
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~--------~i~~~~~~~~i~ 83 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRP--------WLLIGAIPFSIV 83 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcch--------hHHHhHHHHHHH
Confidence 3445556688999999999999999999999999999999999999999854 3321 111111111111
Q ss_pred --HHHhhcc-Cch---HHHHHH-HHHHHhhhhhhhcchhhhhhc--cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc-
Q 021674 207 --LTQLSHV-DSP---AMAVLC-MACSQGTDAFSQSGLYSNHQD--IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ- 276 (309)
Q Consensus 207 --~~~~~~~-~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~- 276 (309)
+...... +.. .+.... .....+.. ....+..+...+ .++++|+...+..+...++|+.+++.+.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~ 162 (437)
T TIGR00792 84 LVLLFTTPDFSATGKLVYAYITYILLGLFYS-FVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSY 162 (437)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHH-hhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111 111111 11111111 111122222222 245788888898888888888777666655542
Q ss_pred ------cCCchHHHHHHHHHHHHHHHHHHh
Q 021674 277 ------HGSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 277 ------~~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
..+|+..+.+.+++.++..++..+
T Consensus 163 ~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 192 (437)
T TIGR00792 163 FGGGDDKFGWFMFALVLALIGVVSLIICFF 192 (437)
T ss_pred hCCCcccccHHHHHHHHHHHHHHHHHHHHc
Confidence 246887777776666655544333
No 188
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.79 E-value=4e-07 Score=84.15 Aligned_cols=158 Identities=12% Similarity=0.003 Sum_probs=97.2
Q ss_pred HHhHHHHHHHHhCCCccc-hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch
Q 021674 138 LTWMPTYYNQVLHFNLTE-SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP 216 (309)
Q Consensus 138 ~~wlp~~l~~~~g~s~~~-~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (309)
..+..+++.+++|+|..+ .|.+......+-.+..+.+|+++||+|.|+. + ....+.-.+........++.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~v--------L-~l~~l~Wsl~t~L~~fa~Sl 115 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPV--------L-VLQALSFVCVWLLLLLGTSV 115 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHH--------H-HHHHHHHHHHHHHHHHHHHH
Confidence 355556888899999999 9999999999999999999999999987631 1 11111111111111112122
Q ss_pred HH-HHHHHHHHHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchH---HHHHHHHHH
Q 021674 217 AM-AVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD---VFKVSVGLY 291 (309)
Q Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~---~~~~~~~~~ 291 (309)
.. .+.=+..|.+-++. . ..+... .-.++++|+.++++.+.+..+|.++++.+.+.+ ...+|+. ...+..+..
T Consensus 116 ~~L~i~R~llGvaEA~~-~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAAR-I-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHH-H-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence 21 11112222222211 1 222222 335678999999999999999999999999994 4445654 344555555
Q ss_pred HHHHHHHHhhcCCccc
Q 021674 292 LVGTAVWNLFSTGEKV 307 (309)
Q Consensus 292 ~~~~~~~~~~~~~~~~ 307 (309)
.++.++..+.++.++|
T Consensus 193 ~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 193 TFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHHHHHHhCCCCchh
Confidence 5566555555555554
No 189
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.77 E-value=3.1e-07 Score=95.62 Aligned_cols=157 Identities=10% Similarity=0.098 Sum_probs=92.7
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCcc--chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674 114 ILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT--ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV 191 (309)
Q Consensus 114 l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~--~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~ 191 (309)
+++++.++......++..++.......+..++.+.++.+.. ..++..+...++..++.++.|+++||+|||+.....
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~- 83 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIV- 83 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHH-
Confidence 56677777777677766666655555566666666666533 357777778888999999999999999987421110
Q ss_pred HHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHh
Q 021674 192 RKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTA 269 (309)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~ 269 (309)
..+..+ ..++.......++....+++ +..+.+.+ ...+...+...+ .++++++.+.++.+....+|..+++.
T Consensus 84 ----~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 84 ----KLFEVG-LTLLIVLAYYLGWFWLAFAVTFLLGAQSA-IYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred ----HHHHHH-HHHHHHHHHHHccHHHHHHHHHHHHHHHH-hhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 000011 11111111112222222222 22222222 112222223333 35578999999999999999999999
Q ss_pred HHHhhccc
Q 021674 270 ATGYILQH 277 (309)
Q Consensus 270 ~~g~l~~~ 277 (309)
+.+++.+.
T Consensus 158 l~~~l~~~ 165 (1146)
T PRK08633 158 LFSFLFES 165 (1146)
T ss_pred HHHHHHHh
Confidence 99998775
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.72 E-value=6e-08 Score=88.55 Aligned_cols=71 Identities=24% Similarity=0.271 Sum_probs=60.1
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674 115 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~ 185 (309)
+||+..|.....+++....+-....+.|.+|+++.|+|..++|.+.+...+...+..++.|.++||++.|+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK 74 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKK 74 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCS
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhH
Confidence 47888888888877777776677799999999989999999999999999999999999999999999775
No 191
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.70 E-value=1.5e-06 Score=81.05 Aligned_cols=151 Identities=13% Similarity=0.112 Sum_probs=78.3
Q ss_pred HHHHHhHHHHHHHHhC---CCccc---hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH
Q 021674 135 FILLTWMPTYYNQVLH---FNLTE---SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 208 (309)
Q Consensus 135 ~~~~~wlp~~l~~~~g---~s~~~---~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 208 (309)
+.......+++.++++ .+..+ .+.......++..++++++|+++||+|||+. +. .+.....+...
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~--------l~-~~~~~~~~~~~ 108 (432)
T PRK10406 38 FYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS--------ML-ISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH--------HH-HHHHHHHHHHH
Confidence 3345556567777664 44443 2334445556677999999999999998741 11 11111111111
Q ss_pred HhhccCch--------HHHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc---
Q 021674 209 QLSHVDSP--------AMAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL--- 275 (309)
Q Consensus 209 ~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~--- 275 (309)
.....++. ...+.+ +..+.+.+.. .+.......| .++++|+.+.++.+.....|..+++.+...+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~-~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 187 (432)
T PRK10406 109 VIACLPGYETIGTWAPALLLLARLFQGLSVGGE-YGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTL 187 (432)
T ss_pred HHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhh-HhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11111111 111111 1222222211 1112222233 45678999888877766666666665544332
Q ss_pred -----ccCCchHHHHHHHHHHHHHH
Q 021674 276 -----QHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 276 -----~~~~~~~~~~~~~~~~~~~~ 295 (309)
+..+|+..|.+.++..++..
T Consensus 188 ~~~~~~~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 188 EDAELREWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred CHHHHhccchHHHHHHHHHHHHHHH
Confidence 24689999988766655443
No 192
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.70 E-value=7.1e-07 Score=84.05 Aligned_cols=140 Identities=11% Similarity=0.087 Sum_probs=81.2
Q ss_pred CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhh-------ccCc-h--HHH
Q 021674 150 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-------HVDS-P--AMA 219 (309)
Q Consensus 150 g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~--~~~ 219 (309)
|.+..+.++..+...++..++.++.|+++||+|||+.... ..+.+....+. .... ...+ . ...
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~------~~~l~~i~~~~-~~~~~~~~~~~~~~~~~~~~~l 123 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI------AAVLFFISALG-SAWPEFGFTSIGPDNTGYVPEF 123 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH------HHHHHHHHHHH-HHhhccccccccccchhHHHHH
Confidence 8888999999999999999999999999999998742111 00111111111 1100 0011 1 111
Q ss_pred HHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc--------ccCCchHHHHHHHH
Q 021674 220 VLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL--------QHGSWDDVFKVSVG 289 (309)
Q Consensus 220 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~--------~~~~~~~~~~~~~~ 289 (309)
+.. ...+++.+.. .+.......| .++++|+.+.++.+....+|..+++.+.+.+. +..+|+..|.+.++
T Consensus 124 ~~~R~l~G~~~g~~-~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~ 202 (479)
T PRK10077 124 VIYRIIGGIGVGLA-SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAI 202 (479)
T ss_pred HHHHHHHhhhHhHH-hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHH
Confidence 111 1122222211 1112222333 45578999999999888888888876655443 33579999887666
Q ss_pred HHHHHHHH
Q 021674 290 LYLVGTAV 297 (309)
Q Consensus 290 ~~~~~~~~ 297 (309)
..++..+.
T Consensus 203 ~~~~~~~~ 210 (479)
T PRK10077 203 PALLFLML 210 (479)
T ss_pred HHHHHHHH
Confidence 65555443
No 193
>PTZ00207 hypothetical protein; Provisional
Probab=98.68 E-value=1.5e-06 Score=83.41 Aligned_cols=155 Identities=12% Similarity=0.060 Sum_probs=84.9
Q ss_pred HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH--HHHhh
Q 021674 134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF--LTQLS 211 (309)
Q Consensus 134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 211 (309)
.|++..+.|. +++++|+|..+.+.+.... .......+..|+++||+|+|+... ++.+...+. +....
T Consensus 43 ~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vll---------ig~ll~~iG~ll~ala 111 (591)
T PTZ00207 43 MYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFV---------LSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHH---------HHHHHHHHHHHHHHHH
Confidence 4666666665 5778999999988887653 344456678899999999763211 111111111 11111
Q ss_pred c----cCchHHHHH-HHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHH
Q 021674 212 H----VDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKV 286 (309)
Q Consensus 212 ~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~ 286 (309)
. ..+.+...+ ....+.+.+.. .........+..|++||.+.|+.+....+|+++.+.+...+.+ .+|...|++
T Consensus 112 ~~~~i~~s~~~l~l~r~l~G~G~~~~-~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~ 189 (591)
T PTZ00207 112 FQEVIEGSVVRLSVYNGLMTLGCMLF-DLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFF 189 (591)
T ss_pred hcccccCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHH
Confidence 0 112222221 12222222211 1111222233457889999999999999999865544444443 246666666
Q ss_pred HHHHHHHHHHHHHhh
Q 021674 287 SVGLYLVGTAVWNLF 301 (309)
Q Consensus 287 ~~~~~~~~~~~~~~~ 301 (309)
.+++.++..+.+..+
T Consensus 190 l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 190 LMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHhh
Confidence 555555554444444
No 194
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.68 E-value=2.2e-06 Score=81.20 Aligned_cols=152 Identities=16% Similarity=0.182 Sum_probs=79.7
Q ss_pred HHHHHhHHHHHHHHhCCCccch-hhH-----hhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHH
Q 021674 135 FILLTWMPTYYNQVLHFNLTES-GLF-----CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 208 (309)
Q Consensus 135 ~~~~~wlp~~l~~~~g~s~~~~-g~~-----~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 208 (309)
+..+.+.-+++.+.++.+..+. ... .+...++..+|.++.|+++||+|||+. +. .+.....+...
T Consensus 32 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~--------l~-~~~~l~~i~~~ 102 (490)
T PRK10642 32 FGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI--------LA-ITIVIMSISTF 102 (490)
T ss_pred HHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH--------HH-HHHHHHHHHHH
Confidence 3444444456776665443221 221 345567888999999999999998742 11 11111111111
Q ss_pred HhhccCchHH--------HHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc---
Q 021674 209 QLSHVDSPAM--------AVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL--- 275 (309)
Q Consensus 209 ~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~--- 275 (309)
.....++... .+.+ +..+++.+.. .+.......| .++++||.+.++.+....+|..+++.+...+.
T Consensus 103 ~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~-~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~ 181 (490)
T PRK10642 103 CIGLIPSYATIGIWAPILLLLCKMAQGFSVGGE-YTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIV 181 (490)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhh-HHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1122222211 1111 1122222211 1112222333 45678999999888777777777775554332
Q ss_pred -----ccCCchHHHHHHHHHHHHHHH
Q 021674 276 -----QHGSWDDVFKVSVGLYLVGTA 296 (309)
Q Consensus 276 -----~~~~~~~~~~~~~~~~~~~~~ 296 (309)
++.+|+..|++.+.+.+++.+
T Consensus 182 ~~~~~~~~gWR~~f~i~~~~~l~~~~ 207 (490)
T PRK10642 182 GEANFLDWGWRIPFFIALPLGIIGLY 207 (490)
T ss_pred CHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 246899999887655554443
No 195
>PRK09952 shikimate transporter; Provisional
Probab=98.67 E-value=3.4e-06 Score=78.76 Aligned_cols=159 Identities=11% Similarity=0.047 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHh--CCCccchhhHh-----hhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 125 VSHFCHNWGTFILLTWMPTYYNQVL--HFNLTESGLFC-----VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~wlp~~l~~~~--g~s~~~~g~~~-----~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
+..++..+-...+....|.++.+++ +.++.+ +... ....++..+++++.|+++||+|||+. +.
T Consensus 29 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~--------l~- 98 (438)
T PRK09952 29 AGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM--------LM- 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH--------HH-
Confidence 3334433333333344555666554 666653 4432 23345667888999999999998731 11
Q ss_pred HhhHHHHHHHHHhhccCchH--------HHHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHH
Q 021674 198 IGFLGPAFFLTQLSHVDSPA--------MAVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFG 267 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~ 267 (309)
.+.....+........++.. ..+.+ ...+.+.+.. .+.......| .++++|+...+..+....+|..++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGE-WGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhccc-HHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 12222222211122222221 11111 1122222211 1111222233 456788988888888888888888
Q ss_pred HhHHHhhcc--------cCCchHHHHHHHHHHHHH
Q 021674 268 TAATGYILQ--------HGSWDDVFKVSVGLYLVG 294 (309)
Q Consensus 268 ~~~~g~l~~--------~~~~~~~~~~~~~~~~~~ 294 (309)
+.+...+.. ..+|+..|.+.+.+.+++
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~ 212 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA 212 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH
Confidence 777665542 357999998776655443
No 196
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.65 E-value=4.1e-07 Score=83.71 Aligned_cols=183 Identities=15% Similarity=0.217 Sum_probs=110.9
Q ss_pred HhhcchH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhC----CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674 113 LILSKPP-VWALIVSHFCHNWGTFILLTWMPTYYNQVLH----FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 187 (309)
Q Consensus 113 ~l~~~~~-~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g----~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~ 187 (309)
..+++|+ ++.+...-+.--+.+|++-.-+-.|+....+ +|.+++.-+.....--.=...+++||++||+-.++
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-- 92 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-- 92 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh--
Confidence 3566654 5556666677778899999999999988888 88888777666665555567889999999974332
Q ss_pred hhhHHHHHHHHhhHHHHHHHHHhhccCchHH---HHHHHHHHHhhhhhhhcchhhh-hhccCCCchHHHHHHHhHhHhhh
Q 021674 188 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM---AVLCMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLA 263 (309)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~a~~~~~~~~~lg 263 (309)
+.++....++...-..........+.. .+.++.++.|..-.+.+.+... ..+.+|+ |-.+.++..+..|+|
T Consensus 93 ----~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiG 167 (498)
T COG3104 93 ----RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIG 167 (498)
T ss_pred ----HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehH
Confidence 112221111111111111111012222 1222222222111111111111 1223344 666778888999999
Q ss_pred hhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhc
Q 021674 264 GVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 264 g~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
+.++|.+.+++.++.+|+.+|..+++-..++.+.+..-.
T Consensus 168 sl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 168 SLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999998888887776655544
No 197
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.64 E-value=1.3e-06 Score=81.16 Aligned_cols=63 Identities=24% Similarity=0.204 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
.+.+.+++.+..+-.....++.++++++|+|..+.|++.+...++..++.+..|+++||+++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~ 68 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSA 68 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 345555665555555668999999999999999999999999999999999999999999764
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.64 E-value=1.3e-06 Score=78.98 Aligned_cols=150 Identities=12% Similarity=0.035 Sum_probs=86.0
Q ss_pred HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH-----HHcCCChhhHHHHHHHHhhHHHHHH--HHHhh
Q 021674 139 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVTTVRKIMQSIGFLGPAFF--LTQLS 211 (309)
Q Consensus 139 ~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~-----~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 211 (309)
.-+|.+++ +.|+|.++.|+.... .+...+ .++.|.++||+ |||+ .++..+.+..+.. .....
T Consensus 9 ~~~~~~~~-~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~--------~~l~~~~~~~~~~~~~l~~~ 77 (356)
T TIGR00901 9 NTLPYWLR-SKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRR--------SWLVLTQVLLLSLLLILSFL 77 (356)
T ss_pred hHHHHHHH-HcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccH--------HHHHHHHHHHHHHHHHHHcC
Confidence 34566665 579999999998644 444444 88999999998 4432 1111111111111 11111
Q ss_pred ccCchHHHHHHHHHHHhh-hhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC--------ch
Q 021674 212 HVDSPAMAVLCMACSQGT-DAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS--------WD 281 (309)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~--------~~ 281 (309)
......+.+.......+. .+.......+...| .++++|+.+.++.....++|..+++.+.+.+.++.+ |+
T Consensus 78 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 78 VPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG 157 (356)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence 111111111111111111 11111111222223 356789999999999999999999999999888766 99
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021674 282 DVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~ 299 (309)
..|.+.+++.+++.+...
T Consensus 158 ~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888877766554433
No 199
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.60 E-value=1.6e-06 Score=79.63 Aligned_cols=172 Identities=15% Similarity=0.061 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH--hhhhHHHHHHHHHHH-HHHHHHHHHcCCChhhHHHHHHHH
Q 021674 122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF--CVLPWLTMAFSANLG-GWIADTLVSKGLSVTTVRKIMQSI 198 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~--~~~~~~~~~ig~~~~-G~l~dr~~~r~~~~~~~~~~~~~~ 198 (309)
.+...++............+|.|+++ +|+|..+.|++ ...+.+...+.+++. ++.+||+|+|+.++. ..
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~-------~~ 76 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL-------PM 76 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH-------HH
Confidence 34455666666666677899999976 59999999997 355666666666666 667888887643211 11
Q ss_pred hhHHH--HHHHHHhhccCc-hHHHHHHHHHHHhhhhhhhcchhh-hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhh
Q 021674 199 GFLGP--AFFLTQLSHVDS-PAMAVLCMACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 274 (309)
Q Consensus 199 ~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l 274 (309)
..... ............ ..+...................-. ..++.++++++...+.......+|..+++...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 111111111112 112121111111111111110111 11233445567777777776688888888888899
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 275 LQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
.++.+|+..|++.+++.++..+....+
T Consensus 157 ~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 157 FGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 998889999998887776655554444
No 200
>PRK15075 citrate-proton symporter; Provisional
Probab=98.59 E-value=4.6e-06 Score=77.79 Aligned_cols=156 Identities=12% Similarity=0.072 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhH-hhhh-----HHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF-CVLP-----WLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 196 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~-~~~~-----~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~ 196 (309)
..+..++..+-...+....| .+.++++.+..+.+.. .+.. .+...++.++.|+++||+|||+.. .
T Consensus 20 ~~~~~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l--------~ 90 (434)
T PRK15075 20 VTSGNFLEMFDFFLFGFYAT-AIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL--------I 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH--------H
Confidence 44455555555555556666 4556678887765433 2222 222346788999999999987421 1
Q ss_pred HHhhHHHHHHHHHhhccCchHH--------HHHH-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhH
Q 021674 197 SIGFLGPAFFLTQLSHVDSPAM--------AVLC-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVF 266 (309)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i 266 (309)
.+..............++... .++. +..+.+.+. ..+.......| .++++|+.+.++.+...+++..+
T Consensus 91 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 91 -VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGV-ELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred -HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccc-cHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 111111111111122222211 1111 111222111 11111122233 45678999999988888888777
Q ss_pred HHhHHHhhc--------ccCCchHHHHHHHH
Q 021674 267 GTAATGYIL--------QHGSWDDVFKVSVG 289 (309)
Q Consensus 267 ~~~~~g~l~--------~~~~~~~~~~~~~~ 289 (309)
++.+.+.+. +..+|+..|.+...
T Consensus 169 g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 777766552 44679988886543
No 201
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.58 E-value=2.2e-06 Score=80.36 Aligned_cols=169 Identities=13% Similarity=0.097 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH----HHHcCCChhhHHHHHHHH
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT----LVSKGLSVTTVRKIMQSI 198 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr----~~~r~~~~~~~~~~~~~~ 198 (309)
+....+.....+-....++++|++ .+|.+..+.+.......+...+..++.|+++|| +|||+.. +..
T Consensus 9 ~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~--------il~ 79 (477)
T TIGR01301 9 VASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF--------IAA 79 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH--------HHH
Confidence 333444445555556688888885 589999999999999999999999999999995 8877422 111
Q ss_pred hhHHHHHHHHHhhccCc-------------hHHHHHHHHHHH-----hhhhhhhcchhhhhhccCC-C--chHHHHHHHh
Q 021674 199 GFLGPAFFLTQLSHVDS-------------PAMAVLCMACSQ-----GTDAFSQSGLYSNHQDIAP-R--YSGVLLGLSN 257 (309)
Q Consensus 199 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~--~~g~a~~~~~ 257 (309)
+.....+.+..+....+ ....+.....++ ..... ..+.-+...|..| + +++.+.+..+
T Consensus 80 g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~-~~p~rALiaDl~p~~~~~~~~a~~~~~ 158 (477)
T TIGR01301 80 GAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNML-QGPCRAFLADLTGGDARRTRIANAYFS 158 (477)
T ss_pred HHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCchhHHHHHHHHHHH
Confidence 11111111111111111 111111111111 11111 1112222344443 3 2478999889
Q ss_pred HhHhhhhhHHHhHHHhhc--cc-------------CCchHHHHHHHHHHHHHHHHHHhh
Q 021674 258 TAGVLAGVFGTAATGYIL--QH-------------GSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 258 ~~~~lgg~i~~~~~g~l~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
...++|+.+++.+.++.- +. .+.+..|.+.+++.+++.++-.+.
T Consensus 159 ~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 159 FFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 999999999998887641 10 146778888777777666554444
No 202
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.51 E-value=2.5e-06 Score=83.27 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=93.4
Q ss_pred HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc----------
Q 021674 143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH---------- 212 (309)
Q Consensus 143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 212 (309)
+-++++++++..+.|++.+...++..++.++.|++.||.+||++.... ..+..++.+..+ +.++..
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g--~ll~~lg~ll~a--lphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIG--CAIMGLGSFLLS--LPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEec--HHHHHHHHHHHh--ChHHhcCCcccccccc
Confidence 456778999999999999999999999999999999999877644332 112222221111 111000
Q ss_pred ---------------c-----------------C--c-hHHHH--HHHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHH
Q 021674 213 ---------------V-----------------D--S-PAMAV--LCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLG 254 (309)
Q Consensus 213 ---------------~-----------------~--~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~ 254 (309)
. + + ....+ .-+..+.+.+.. .+...+...| .++++++...+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~-~~~~~~~i~d~~~~~~~~~~~~ 211 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI-FPLGISYIDDFAKSKNSPLYIG 211 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc-hhcCchhhhccCCccccHHHHH
Confidence 0 0 0 11111 111222222211 1112223334 45678999999
Q ss_pred HHhHhHhhhhhHHHhHHHhhcccC----------------------CchHHHHHHHHHHHHHHHHHHhhc
Q 021674 255 LSNTAGVLAGVFGTAATGYILQHG----------------------SWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 255 ~~~~~~~lgg~i~~~~~g~l~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
+.+....+|..+|+.++|++.+.. .|...|.+.+++.++..+.+..+.
T Consensus 212 i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 212 ILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999887531 255567766666665555544444
No 203
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.49 E-value=1.5e-05 Score=76.35 Aligned_cols=175 Identities=12% Similarity=0.100 Sum_probs=90.6
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHH---HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhH
Q 021674 115 LSKPPVWALIVSHFCHNWGTFILL---TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV 191 (309)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~---~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~ 191 (309)
+++|++...+....+.....|... .=..+++.++.|-+ .+..++.....++..+..++.|.++|.+|||..
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~----- 110 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF----- 110 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH-----
Confidence 467777655433333222222222 22234566666776 445556666778899999999999999998731
Q ss_pred HHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHh
Q 021674 192 RKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTA 269 (309)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~ 269 (309)
++ .+.+...+-.......++....+.. ...+.+.+.. ........|. +.+.|+...++...........+|.
T Consensus 111 ---~i-~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~--~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ 184 (599)
T PF06609_consen 111 ---FI-IGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQ--ELAALAISELVPNKWRGLGLAIASIPFIITTWISPL 184 (599)
T ss_pred ---HH-HHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHH--HHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHH
Confidence 11 1111111111111222333222221 1122222111 1111123344 4467877777665544344446666
Q ss_pred HHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 270 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 270 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+...+..+.+|++.|.+..+...++.+...++
T Consensus 185 ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 185 IAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 66666666789999988777666665444444
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=98.47 E-value=1.2e-06 Score=83.22 Aligned_cols=141 Identities=9% Similarity=-0.011 Sum_probs=85.5
Q ss_pred HHHHhCCC---ccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHH
Q 021674 145 YNQVLHFN---LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL 221 (309)
Q Consensus 145 l~~~~g~s---~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (309)
++++.+++ ..+.++..+...++..++.++.|+++||+|||+. +. .+.....+........++....++
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~--------~~-~~~~~~~i~~~~~~~~~~~~~~~~ 185 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKV--------LL-LSTLVTAVSGVLTAFSPNYTVFLV 185 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHH--------HH-HHHHHHHHHHHHHHHcccHHHHHH
Confidence 45678888 7889999999999999999999999999997631 11 111111111111122233333222
Q ss_pred H-HHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHH
Q 021674 222 C-MACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 298 (309)
. ...+++.+.. .........| .++++|+.+.++.+....+|..++|.+.+.+.+ |+..+.+.++..++..+.+
T Consensus 186 ~r~l~G~~~~~~-~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 186 FRLLVGMGIGGI-WVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred HHHHHHhhccch-HHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH
Confidence 2 2222222211 1112222334 355679999998888888888888877655543 8888887776666555444
No 205
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.46 E-value=1.8e-05 Score=75.35 Aligned_cols=138 Identities=13% Similarity=0.033 Sum_probs=78.1
Q ss_pred CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCc----hHHHHHH-HHH
Q 021674 151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS----PAMAVLC-MAC 225 (309)
Q Consensus 151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~ 225 (309)
.+..+.+++.+...++..++.++.|+++||+|||+.... ..+......+... ...... ....+.. +..
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~------~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~r~l~ 125 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM------ELIIMIIATVASG-LSPGSSPKSVMATLCFWRFWL 125 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH------HHHHHHHHHHHHH-HccCcccchHHHHHHHHHHHH
Confidence 344566888888999999999999999999998732110 0011111111111 111111 1122221 222
Q ss_pred HHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc-----------------------cCCch
Q 021674 226 SQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-----------------------HGSWD 281 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~-----------------------~~~~~ 281 (309)
+++.+.. .+.......| .+++.|+.+.++.+....+|..+++.+...+.. ..+|+
T Consensus 126 G~~~g~~-~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR 204 (502)
T TIGR00887 126 GVGIGGD-YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR 204 (502)
T ss_pred HHHHhhh-hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence 3332211 1112222333 456789999999999999999888888765432 12698
Q ss_pred HHHHHHHHHHHHHHH
Q 021674 282 DVFKVSVGLYLVGTA 296 (309)
Q Consensus 282 ~~~~~~~~~~~~~~~ 296 (309)
..+.+.+...++..+
T Consensus 205 ~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 205 ILIGFGAVPALLALY 219 (502)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888766655554443
No 206
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.44 E-value=2.8e-07 Score=70.87 Aligned_cols=70 Identities=27% Similarity=0.485 Sum_probs=62.3
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHH
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 71 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~ 71 (309)
|++.+...+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..|||+.|++.+.+.++..
T Consensus 62 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 62 GFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 5566777888999999999999999999999999999999999999999999999999998776665543
No 207
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=3.3e-06 Score=78.91 Aligned_cols=260 Identities=16% Similarity=0.122 Sum_probs=148.5
Q ss_pred cccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHHHHHhhcccCCCC
Q 021674 5 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 84 (309)
Q Consensus 5 ~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~ 84 (309)
-+......++++++....++|...+|+.+.....+..+++.+++.+.+..|--..|.+..+..++.........||+-.+
T Consensus 126 ~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~ 205 (463)
T KOG2816|consen 126 FSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE 205 (463)
T ss_pred hhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence 34667788899999999999999999999999999999999999999999999999886665555433333334443222
Q ss_pred CCCCCHHHHHHHHhccCCCC-CCCC-CChhHhhcchHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHhCCCccchhhHhh
Q 021674 85 DPQLRPAEKKLIVSSCASKE-PVKT-IPWGLILSKPPVWALIVSHFCHNWGTFILLT-WMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
++.+.++......++...+ ..+. ...+..-.+|..+.+.+..++....-.+-.. -++.|+...+|++..+.+.+.+
T Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~ 284 (463)
T KOG2816|consen 206 -KERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLS 284 (463)
T ss_pred -cccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHH
Confidence 1111000000000000000 0000 0011111234444444444443333222111 3366788889999999998888
Q ss_pred hhHHHHHHHHHHHH-HHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHH-HHHHHHHhhhhhhhcchhh
Q 021674 162 LPWLTMAFSANLGG-WIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYS 239 (309)
Q Consensus 162 ~~~~~~~ig~~~~G-~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (309)
.......++..+.. .+...++.|+ .+..++..-.+........+.++... ......+.. ...+..-+
T Consensus 285 ~~~~~~~i~~l~~~~~l~~~l~~~~---------~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~--~~~pa~~s 353 (463)
T KOG2816|consen 285 LVSILGIISQLLLLPLLSSILGEKR---------LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG--IVFPAIRA 353 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh---------HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc--chhHHHHh
Confidence 88888888887776 7777777653 11122221111111122222333221 111111111 11121212
Q ss_pred h-hhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674 240 N-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 276 (309)
Q Consensus 240 ~-~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~ 276 (309)
. .....++++|.+.++...+..+.+.++|.+.+.+..
T Consensus 354 ~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 354 FASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 1 223467789999999999999999999999888743
No 208
>PRK09669 putative symporter YagG; Provisional
Probab=98.40 E-value=2.8e-06 Score=79.47 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH
Q 021674 130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL 181 (309)
Q Consensus 130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~ 181 (309)
.+.....+.+|++.|+.++.|+|+..+|.++.+.-+...+..++.|+++||.
T Consensus 21 ~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~ 72 (444)
T PRK09669 21 CNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRT 72 (444)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecC
Confidence 3444556678999999999999999999999999999999999999999994
No 209
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.38 E-value=2.5e-05 Score=70.94 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=39.6
Q ss_pred cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc--------ccCCchHHHHHHHHHHHHHHHH
Q 021674 244 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL--------QHGSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 244 ~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~--------~~~~~~~~~~~~~~~~~~~~~~ 297 (309)
.++++|+...+..+....+|..+++.+.+.+. +..+|+..|.+.+.+.+++.+.
T Consensus 125 ~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 125 APPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 45678999999988888888888888766553 2357888888776666555544
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.36 E-value=6.9e-06 Score=77.54 Aligned_cols=58 Identities=17% Similarity=0.350 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH----HHcC
Q 021674 128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL----VSKG 185 (309)
Q Consensus 128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~----~~r~ 185 (309)
+..+.....+.+|++.|++++.|+|+...|.++.+.-+...+..++.|+++||. |||+
T Consensus 16 ~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrr 77 (473)
T PRK10429 16 FGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFK 77 (473)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcc
Confidence 334455566778999999999999999999999999999999999999999954 6654
No 211
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.32 E-value=1.3e-05 Score=75.48 Aligned_cols=174 Identities=16% Similarity=0.109 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH---HcCCChhhHHHHHHH
Q 021674 121 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV---SKGLSVTTVRKIMQS 197 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~---~r~~~~~~~~~~~~~ 197 (309)
..+...++..... +....-++.++++++|+|+.+.+.+.+...+.-.+ .++.|.++||++ +||++ .+.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~------~l~- 99 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRW------YLV- 99 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchH------HHH-
Confidence 3444456776666 77778899999999999999998888877777766 556999999995 33211 111
Q ss_pred HhhHHH-HHHHHHhhccCc-hHHHH-HHHHHHHhhhhh--hhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHH
Q 021674 198 IGFLGP-AFFLTQLSHVDS-PAMAV-LCMACSQGTDAF--SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 272 (309)
Q Consensus 198 ~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g 272 (309)
...+.. +..+......++ ..... .++...++.... ...+.+....+.+++..+...+......++|..+++.+.|
T Consensus 100 ~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G 179 (468)
T TIGR00788 100 LSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGG 179 (468)
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 111111 112121222122 22222 222222221111 1111222111111222232333333345578899999999
Q ss_pred hhcccCCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674 273 YILQHGSWDDVFKVSVGLYLVGTAVWNLFST 303 (309)
Q Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (309)
.+.+..+|+..|.+.+++.++..+...++.+
T Consensus 180 ~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 180 PLLDKTLTRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHhccc
Confidence 9999888999998887777766555454443
No 212
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.28 E-value=9.9e-05 Score=68.31 Aligned_cols=64 Identities=23% Similarity=0.482 Sum_probs=56.6
Q ss_pred CcccccchhhHHHHHhccCCCc--chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhh
Q 021674 2 GIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 65 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~--~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~ 65 (309)
++|.|..=|+..++++|.+||+ ||-...+++..+.++|+.++|.+.+++.+.+||+..|-+.++
T Consensus 128 ~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aav 193 (498)
T COG3104 128 IVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAV 193 (498)
T ss_pred HhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 4788899999999999999744 467888999999999999999999999999999999997443
No 213
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.28 E-value=4.3e-06 Score=77.81 Aligned_cols=163 Identities=15% Similarity=0.107 Sum_probs=95.7
Q ss_pred HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHH----HHHHcCCChhhHHHHHHHHhhHHHHHH
Q 021674 131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD----TLVSKGLSVTTVRKIMQSIGFLGPAFF 206 (309)
Q Consensus 131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~d----r~~~r~~~~~~~~~~~~~~~~~~~~~~ 206 (309)
+.....+.+|++.|+++..|+++...|++.....+...+..++.|+++| |+|||+..... +.+..++.
T Consensus 14 ~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~--------g~i~~~~~ 85 (428)
T PF13347_consen 14 NMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILI--------GAILLALS 85 (428)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeeh--------hhHHHHHH
Confidence 3444556679999999999999999999999999999999999999999 67877544321 11111111
Q ss_pred HHHhhcc-C---ch----HHHHH-HHHHHHhhhhhhhcchhhhhhcc--CCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 207 LTQLSHV-D---SP----AMAVL-CMACSQGTDAFSQSGLYSNHQDI--APRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 207 ~~~~~~~-~---~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
...+... . +. .+..+ ..+...+. .+...+..+...|. ++++|....+..+....+|+.+...+.+.+.
T Consensus 86 ~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~-t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~ 164 (428)
T PF13347_consen 86 FFLLFSPPPAGLSFTAKLVWLFVFYILFDIAY-TFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV 164 (428)
T ss_pred HHHhhccccchhhhhhHHHHHHHHHHHHHHhh-hhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 1111111 0 11 11111 11111111 11111112222232 3457888888878878887776666766666
Q ss_pred cc-C------CchHHHHHHHHHHHHHHHHHHhhc
Q 021674 276 QH-G------SWDDVFKVSVGLYLVGTAVWNLFS 302 (309)
Q Consensus 276 ~~-~------~~~~~~~~~~~~~~~~~~~~~~~~ 302 (309)
+. + +|.....+.+++.+++.++..+..
T Consensus 165 ~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ 198 (428)
T PF13347_consen 165 SWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFV 198 (428)
T ss_pred hhhccCccchHHHHHHHHHHHHHHHHhhhhhhee
Confidence 43 1 467666766766666665544443
No 214
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.28 E-value=1.1e-05 Score=75.54 Aligned_cols=150 Identities=15% Similarity=0.193 Sum_probs=100.6
Q ss_pred HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH---HHHhhccCchHHHHHH-H
Q 021674 148 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF---LTQLSHVDSPAMAVLC-M 223 (309)
Q Consensus 148 ~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~ 223 (309)
.+.+|..+.+++.+....+..++.+.+|++.||+|.|+. ...+.+..++. ........ .+..+++ +
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v---------~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~ 136 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRV---------FFISGLISALLTLLTPLAASIG-FYLLLVLRF 136 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHH---------HHHHHHHHHHHHHHHHHHHHhc-chhhHHHHH
Confidence 577889999999999999999999999999999997632 11222222211 11111111 1111111 1
Q ss_pred HHHHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhh
Q 021674 224 ACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
.-|++.+. ..+.+-.... =.+|++|+...++...+.++|.+++-++.|++.+. .||.++|.+.+++.++-.++|..+
T Consensus 137 lqGl~~g~-~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 137 LQGLGQGV-LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HhHHHHhH-HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 11222111 1111111111 24668999999999999999999999999999998 899999999999998888899888
Q ss_pred cCCcccc
Q 021674 302 STGEKVV 308 (309)
Q Consensus 302 ~~~~~~~ 308 (309)
.++++..
T Consensus 216 ~~d~P~~ 222 (466)
T KOG2532|consen 216 YSDSPSK 222 (466)
T ss_pred hcCCccc
Confidence 7776653
No 215
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.24 E-value=1.7e-06 Score=78.90 Aligned_cols=147 Identities=18% Similarity=0.177 Sum_probs=94.4
Q ss_pred HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-H
Q 021674 145 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-M 223 (309)
Q Consensus 145 l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 223 (309)
.++.+|.++++.|++.....+...+.+++.|++.||+.|+++...... ++. .+.+...+ ....+..+++ .
T Consensus 59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~-iW~------~Av~~~~f--s~~Fwq~~l~R~ 129 (493)
T KOG1330|consen 59 VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF-IWT------LAVFASGF--SNHFWQVLLCRG 129 (493)
T ss_pred HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH-HHH------HHHHHHHH--HHHHHHHHHHHH
Confidence 567789999999999999999999999999999999987654332210 111 11111111 1122222222 2
Q ss_pred HHHHhhhhhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-chHHHHHHHHHHHHHHHHHHhh
Q 021674 224 ACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
..+.|-..+ .+...+...|..+ +.|+...++.|+...+|..+|-...+.+.++.+ |+++|.+.+++.++..+...++
T Consensus 130 ~vGiGeAs~-~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 130 FVGIGEASY-SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred Hhccchhhh-cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhh
Confidence 222222112 1222233445544 579999999999999999998888888877744 9999988777776665444444
No 216
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.23 E-value=6.5e-06 Score=73.82 Aligned_cols=143 Identities=19% Similarity=0.173 Sum_probs=92.0
Q ss_pred hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HH
Q 021674 149 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQ 227 (309)
Q Consensus 149 ~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 227 (309)
++-+.++.|+++....+...+.+++.|.++||+|.| ..+.+++......-..+...++..+.++.-.. +.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~---------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK---------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc---------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 345677899999999999999999999999999965 23333333222221222223333332222222 11
Q ss_pred hhhhhhhcchhhhhhccCC--CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 228 GTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~--~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+. ++..+.-.+...+..| ++|+.++|+.-.+..+|-.++|..+|.+=|..|+...|.+.+++.++-...-.+.
T Consensus 172 gs-A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 172 GS-AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred hH-HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 21 2222222222223333 3689999999999999999999999999999899999999888877665443333
No 217
>PRK11462 putative transporter; Provisional
Probab=98.22 E-value=5.1e-05 Score=71.39 Aligned_cols=157 Identities=12% Similarity=-0.008 Sum_probs=88.9
Q ss_pred HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHH----HHcCCChhhHHHHHHHHhhHHHHHH
Q 021674 131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL----VSKGLSVTTVRKIMQSIGFLGPAFF 206 (309)
Q Consensus 131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~----~~r~~~~~~~~~~~~~~~~~~~~~~ 206 (309)
+.......+|++.|+.+..|+++..+|.++.+.-+.-.+.-++.|+++||. ||||. ++..+.+..++.
T Consensus 22 ~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp--------~il~g~i~~~i~ 93 (460)
T PRK11462 22 HIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRP--------WVLFGALPFGIV 93 (460)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcch--------hHhHHHHHHHHH
Confidence 344455668999999999999999999999999999999999999999985 33322 222221111111
Q ss_pred HHHhhc-cC-c--h--HHHHHH-HHHHHhhhhhhhcchhh--hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 207 LTQLSH-VD-S--P--AMAVLC-MACSQGTDAFSQSGLYS--NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 207 ~~~~~~-~~-~--~--~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
...+.. .+ + . .+.... .....+.... ..+..+ .+...++++|....+....++++|+.+++.+...+++.
T Consensus 94 ~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~-~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 94 CVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVV-NIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHH-hccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 11 1 1 111111 1111111111 112222 22234577899999988888888887777665554432
Q ss_pred -------CCchHHHHHHHHHHHHHHH
Q 021674 278 -------GSWDDVFKVSVGLYLVGTA 296 (309)
Q Consensus 278 -------~~~~~~~~~~~~~~~~~~~ 296 (309)
.+|.....+.+++.+++.+
T Consensus 173 ~g~~~~~~g~~~~~~i~~ii~~i~~~ 198 (460)
T PRK11462 173 IGGDNKPLGFQGGIAVLSVVAFMMLA 198 (460)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 1355444444444444443
No 218
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.15 E-value=1.4e-05 Score=55.52 Aligned_cols=62 Identities=21% Similarity=0.275 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674 123 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~ 185 (309)
+-..+++...+.-.+..++|.|+++ .|+|+.++|.+..+..+...+++++.|+++||+++++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 3344566666677788999999986 7999999999999999999999999999999998763
No 219
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.11 E-value=0.00026 Score=63.88 Aligned_cols=141 Identities=14% Similarity=0.145 Sum_probs=82.4
Q ss_pred HHHHHHHHH-HHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHH
Q 021674 126 SHFCHNWGT-FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 204 (309)
Q Consensus 126 ~~~~~~~~~-~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~ 204 (309)
..++..|++ ....--+-+.+++.++++..|++++......+..+.++..|++.+|++.|+ .++ .++.+.+
T Consensus 19 t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~-------gi~--lgL~l~a 89 (422)
T COG0738 19 TSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA-------GIV--LGLLLYA 89 (422)
T ss_pred HHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH-------HHH--HHHHHHH
Confidence 333444443 334445566778899999999999999999999999999999999999763 122 2222222
Q ss_pred HHHHHhh---ccCchHHHH-HHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674 205 FFLTQLS---HVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 276 (309)
Q Consensus 205 ~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~ 276 (309)
.....++ ...+....+ .++..+.|.+.. .+...+..... +++....=+.+.+....+|+.++|.+++.++.
T Consensus 90 vg~~lF~pAa~~~~y~~FL~~lFila~Gi~~L-etaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 90 VGAALFWPAASSKSYGFFLVALFILASGIGLL-ETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHH-HhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 2222121 111222222 222233333322 11111222222 33334444567777888899999999999887
No 220
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.10 E-value=0.00016 Score=64.38 Aligned_cols=151 Identities=20% Similarity=0.209 Sum_probs=97.0
Q ss_pred HHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHH
Q 021674 145 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA 224 (309)
Q Consensus 145 l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (309)
+++++|.|.+.+|++..++.++..+.+++..++..|++.++ ... .+++..+.-...-.....+....-...
T Consensus 38 Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er-------~l~--~~Llli~~G~~iR~~~~~~~L~~gt~l 108 (395)
T COG2807 38 IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEER-------SLF--LALLLIAAGILIRSLGGLPLLFLGTLL 108 (395)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHH-------HHH--HHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 55778999999999999999999999999999999999652 111 111111111111011111111111111
Q ss_pred HHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc-CCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674 225 CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFST 303 (309)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (309)
.+.+.. ..+..+-+...+.-|++.+..+|+..+.-.+++++++.+.-.+.++ ++|+....+.+...+++.++|..-..
T Consensus 109 ~G~gIa-v~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~ 187 (395)
T COG2807 109 AGAGIA-VINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQAL 187 (395)
T ss_pred HHhhHH-HHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 222221 2222122223444688889999999999999999999888888777 47998888888888888877765533
Q ss_pred Cc
Q 021674 304 GE 305 (309)
Q Consensus 304 ~~ 305 (309)
|+
T Consensus 188 r~ 189 (395)
T COG2807 188 RE 189 (395)
T ss_pred cc
Confidence 43
No 221
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.08 E-value=3.9e-05 Score=71.59 Aligned_cols=50 Identities=24% Similarity=0.303 Sum_probs=43.6
Q ss_pred CcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHH
Q 021674 22 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 71 (309)
Q Consensus 22 ~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~ 71 (309)
+++||.-++.......+|++++..++|.+.+..++|..|.+.+.+..+..
T Consensus 119 p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 119 PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 34489999999999999999999999999999999999998777766543
No 222
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.07 E-value=0.00019 Score=66.18 Aligned_cols=62 Identities=24% Similarity=0.260 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
++...+++.....-....++|.||++ .|+|..|+|.+++...+...++.++.|+++||.+++
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~ 67 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA 67 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH
Confidence 44555555555555667889999987 689999999999999999999999999999998754
No 223
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.05 E-value=4.9e-05 Score=72.62 Aligned_cols=138 Identities=14% Similarity=0.052 Sum_probs=87.0
Q ss_pred HHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHH-HH
Q 021674 147 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-AC 225 (309)
Q Consensus 147 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 225 (309)
+..+.+.....+..++..++..+|+++.|.++||+|||+. ..+++....++........+....+.+- ..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~---------~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPV---------LLVSLLLFIIFGILTAFAPNYWMFLIFRFLS 181 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHH---------HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4455666777888888999999999999999999997732 1122222222222222333433333322 22
Q ss_pred HHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHH
Q 021674 226 SQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 297 (309)
+++..... ...+... +-..|++|+.+..+ ......++.++++..+++.. +|+..+++.....++..+.
T Consensus 182 G~~~~~~~-~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 182 GFFGSGPL-TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred Hhhccchh-HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH
Confidence 32222111 1112222 33577899999998 77788889999999999987 7998888877776655544
No 224
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.05 E-value=0.00028 Score=65.37 Aligned_cols=243 Identities=13% Similarity=0.077 Sum_probs=129.0
Q ss_pred CCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHH---HHHhhc-ccCCC--CCCCCCHHHHH
Q 021674 21 PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT---VWLSKA-HSSPA--EDPQLRPAEKK 94 (309)
Q Consensus 21 p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~---~~~~~~-~~~p~--~~~~~~~~~~~ 94 (309)
+++++.+.++.+--.=.+-.+++|.+.|.+....|.+....+.+...++... .++.+. +..|+ ++++.++++..
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~ 222 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESS 222 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccc
Confidence 3555666666666666688999999999999988888877776665554332 111111 22221 00000000000
Q ss_pred HHHh--ccCCCCC-----------CCCCChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhh
Q 021674 95 LIVS--SCASKEP-----------VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV 161 (309)
Q Consensus 95 ~~~~--~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~ 161 (309)
...+ +..++++ ....+|+..+|+|.+.......++.. ...++-.-+..|+.+. |+|+...|.+-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~~lmt~yl~~~-G~s~~~igi~R~ 300 (432)
T PF06963_consen 223 SDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFGGLMTAYLKSQ-GYSPSVIGIFRG 300 (432)
T ss_pred ccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCcHHHHHHHHHC-CCCHHHHHHHHH
Confidence 0000 0000000 00234666777776655444444332 2445566777899865 999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCch--HHHHHHHHHH-----Hhhhhhhh
Q 021674 162 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP--AMAVLCMACS-----QGTDAFSQ 234 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~ 234 (309)
...+.+..++.+..++.+|+|..+.-.+ ....... + .......+....++ ......+..+ .|...+-.
T Consensus 301 ~gav~Gl~gT~~~p~l~~riGlvr~G~~--~l~~q~~-~--L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL 375 (432)
T PF06963_consen 301 LGAVFGLLGTWVYPWLMKRIGLVRAGLW--SLWWQWV-C--LALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL 375 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhHHH--HHHHHHH-H--HHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH
Confidence 9999999999999999999985431111 1111111 1 11222222232322 2222222222 12212211
Q ss_pred cchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhH
Q 021674 235 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA 270 (309)
Q Consensus 235 ~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~ 270 (309)
...+...++.++++||+..|+-+...++.-.+.-.+
T Consensus 376 ~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 376 AVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 111111233555789999999888887766544433
No 225
>PRK09848 glucuronide transporter; Provisional
Probab=98.03 E-value=0.00013 Score=68.38 Aligned_cols=54 Identities=19% Similarity=0.341 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674 130 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS 183 (309)
Q Consensus 130 ~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~ 183 (309)
.+........+++.|+++..|+++.++|.+..+..+...+..++.|+++||.++
T Consensus 20 ~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~ 73 (448)
T PRK09848 20 NNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNT 73 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCC
Confidence 344445566778889999999999999999999999999999999999999854
No 226
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.0001 Score=70.05 Aligned_cols=165 Identities=13% Similarity=0.084 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHHHH---hHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Q 021674 121 WALIVSHFCHNWGTFILLT---WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 197 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~---wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~ 197 (309)
|...+..|..+...+++.. -+=..+++.++-+..+++++.++........+++.+.+.||+|.|.. ..
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v---------~i 115 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV---------MI 115 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH---------HH
Confidence 4444555555444444331 12234567788888889999988888888999999999999997631 11
Q ss_pred HhhHHHHHHHHHhhccCchHHHHHHHHH--HHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhc
Q 021674 198 IGFLGPAFFLTQLSHVDSPAMAVLCMAC--SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 275 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~ 275 (309)
++.++....+.......+.+..++.... +.|.+....+.+ ......-.+.|+.|.|+...+.-+|.++-|.+.-+++
T Consensus 116 ~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~pai-viv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 116 AGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAV-VILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchh-hhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 2222111111111222333333332222 222221111211 1122334578999999999999999999999999999
Q ss_pred ccCCchHHHHHHHHHHHHHH
Q 021674 276 QHGSWDDVFKVSVGLYLVGT 295 (309)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~ 295 (309)
+..+|+..++....+.+-++
T Consensus 195 ~~~G~r~~~l~~~~~~l~~~ 214 (509)
T KOG2504|consen 195 SKYGWRGALLIFGGISLNVL 214 (509)
T ss_pred HHhCcHHHHHHHHHHHHHHH
Confidence 99899988877666665444
No 227
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.92 E-value=5.7e-05 Score=67.55 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=79.9
Q ss_pred HHHHHhHHHHHHHHh----CCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHh
Q 021674 135 FILLTWMPTYYNQVL----HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 210 (309)
Q Consensus 135 ~~~~~wlp~~l~~~~----g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (309)
|.+..|+---+++.+ +-+..-+|++-+.+.+...+.++..|.++||+|||. .+.++.++.++.....
T Consensus 45 ~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkp---------vll~c~~~va~s~ll~ 115 (451)
T KOG2615|consen 45 YPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKP---------VLLACLIGVALSYLLW 115 (451)
T ss_pred hHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchH---------HHHHHHHHHHHHHHHH
Confidence 334444444444433 445567888888889999999999999999999873 2233333444444333
Q ss_pred hccCchHHHHHHHHHHHhhhhhh--hcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674 211 SHVDSPAMAVLCMACSQGTDAFS--QSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 276 (309)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~ 276 (309)
...++. .++.. .-+..+.+. .+..-+...|. ++++++.+++.+++...+|-++||.++|++.+
T Consensus 116 ~~S~~F-~afv~--aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 116 ALSRNF-AAFVL--ARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHH-HHHHH--HHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 332222 11111 011111121 11122233454 45789999999999999999999999999987
No 228
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.89 E-value=0.00038 Score=68.06 Aligned_cols=164 Identities=15% Similarity=0.113 Sum_probs=95.9
Q ss_pred HHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH-HHHHHHHHhh
Q 021674 133 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQLS 211 (309)
Q Consensus 133 ~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 211 (309)
.+|++.+-+-.|+++.+|++..++..+........-+...++|+++|++-.|. +.+.....+ .....+..+.
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-------~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-------KTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHHHHhc
Confidence 46778888889999999999888888777776677788899999999976542 111111111 1111111111
Q ss_pred cc-C---chHH--HHH-HHHHHHhhhhh--hhcchhhhh-hccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc----
Q 021674 212 HV-D---SPAM--AVL-CMACSQGTDAF--SQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---- 277 (309)
Q Consensus 212 ~~-~---~~~~--~~~-~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---- 277 (309)
.. . .... ..+ +...+.|.+.+ ..++..... .+..++.+-....+.....++|+.+++.+.+++-+.
T Consensus 75 a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f 154 (654)
T TIGR00926 75 AIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF 154 (654)
T ss_pred cCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 11 0 1111 111 11112222211 111111111 111123467778888889999999999999988643
Q ss_pred ---CCchHHHHHHHHHHHHHHHHHHhhcC
Q 021674 278 ---GSWDDVFKVSVGLYLVGTAVWNLFST 303 (309)
Q Consensus 278 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (309)
.+|..+|.+.+++.+++.+++....+
T Consensus 155 g~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 155 GCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 25888999888888888877655443
No 229
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.83 E-value=0.00039 Score=64.62 Aligned_cols=176 Identities=15% Similarity=0.136 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674 128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL 207 (309)
Q Consensus 128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~ 207 (309)
+..+...-....|++.|+.++.|+|+..+|.++.+.=+.-++.-++.|.++||..+|. ..+|.++..+.+-.++..
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~----GrfRP~lL~g~ip~~i~~ 97 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRW----GRFRPWLLWGAIPFAIVA 97 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccc----ccccHHHHHHhHHHHHHH
Confidence 3444555567789999999999999999999999998999999999999999864321 113333333322222222
Q ss_pred HHhhccC-----c-hHH-HHHHHHHHHhhhhhhhcc-hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc--
Q 021674 208 TQLSHVD-----S-PAM-AVLCMACSQGTDAFSQSG-LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-- 277 (309)
Q Consensus 208 ~~~~~~~-----~-~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~-- 277 (309)
....... . ..+ .+..+....+....+.+- ....+...+|++|..-.+.-..+.++|+.+...+.+.+++.
T Consensus 98 ~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g 177 (467)
T COG2211 98 VLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG 177 (467)
T ss_pred HHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2222211 1 112 222222322222221110 11123335677888777777777777776666666555543
Q ss_pred -----CCchHHHHHHHHHHHHHHHHHHhhcCCcccc
Q 021674 278 -----GSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV 308 (309)
Q Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (309)
.+|.....+..++..+ ...+-++.+||+..
T Consensus 178 ~~~~~~g~~~~~~~~~vi~~i-~~l~~~~~v~ER~~ 212 (467)
T COG2211 178 GGDKALGYQGTALVLGVIGVI-LLLFCFFNVKERVV 212 (467)
T ss_pred CCcchhhHHHHHHHHHHHHHH-HHHHHHHHhhcccC
Confidence 1344443333333332 33445556666653
No 230
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.82 E-value=0.0012 Score=61.86 Aligned_cols=154 Identities=15% Similarity=0.196 Sum_probs=84.1
Q ss_pred HhHHHHHHHHhCCCccch------hhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhc
Q 021674 139 TWMPTYYNQVLHFNLTES------GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 212 (309)
Q Consensus 139 ~wlp~~l~~~~g~s~~~~------g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (309)
.|.-.-+.+.+|.+..+. +...+...+++.+|+.+.|+++||+|||+-. .+.....++.+++......
T Consensus 39 ~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l------~~~~~l~~~~~~~~~~s~~ 112 (485)
T KOG0569|consen 39 SFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNAL------LLSNLLAVLAALLMGLSKS 112 (485)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH------HHHHHHHHHHHHHHHHHHH
Confidence 444445566677554442 4556667789999999999999999987311 1111111122222211112
Q ss_pred cCchHHHHHH-HHHHHhhh-hhhhcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHH-Hhhccc-CCchHHHHHH
Q 021674 213 VDSPAMAVLC-MACSQGTD-AFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAAT-GYILQH-GSWDDVFKVS 287 (309)
Q Consensus 213 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~-g~l~~~-~~~~~~~~~~ 287 (309)
.+...+.+.. +..+...+ .....++| ..|..| +.||......+....+|-.++..++ -.++++ ..|...+.+.
T Consensus 113 ~~~~e~li~GR~i~Gl~~gl~~~~~pmy--l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~ 190 (485)
T KOG0569|consen 113 APSFEMLILGRLIVGLACGLSTGLVPMY--LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFP 190 (485)
T ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHH
Confidence 2233333222 11121111 11122233 346666 5799999988888888777775444 445555 4588777776
Q ss_pred HHHHHHHHHHHHh
Q 021674 288 VGLYLVGTAVWNL 300 (309)
Q Consensus 288 ~~~~~~~~~~~~~ 300 (309)
.+..++..+...+
T Consensus 191 ~i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 191 LIPALLQLALLPF 203 (485)
T ss_pred HHHHHHHHHHHhc
Confidence 6665555544333
No 231
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.80 E-value=0.00036 Score=59.43 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=55.2
Q ss_pred CcchhHHHHHHHhhhhhHHHHhhhh--HH-HHhh--hcCCcchhHhhhhHHHHHHHHHHhhcccCCCCCCCCC-HHHHHH
Q 021674 22 VAERSRSLALVYSGMYLGSVTGLAF--SP-FLIH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR-PAEKKL 95 (309)
Q Consensus 22 ~~~rg~~~g~~~~~~~~g~~lg~~l--~~-~l~~--~~gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~-~~~~~~ 95 (309)
.|||++...+-..+.++|+++.... -. -..+ .-+||+++-+.+.+.++.++++.+..++ -|....+ ++|+
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~--fd~~~~~~k~~k-- 76 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN--FDIYSPKEKQEK-- 76 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCccccccc--
Confidence 3678888888888999999887543 11 1111 2359999998888777665555544322 1111111 1111
Q ss_pred HHhccCCCCCCCCCChhHhhcchHHHHHHHHH
Q 021674 96 IVSSCASKEPVKTIPWGLILSKPPVWALIVSH 127 (309)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 127 (309)
++. +.+ ++....+++|++..|...+.+
T Consensus 77 --~~~-~~~--~~~s~~~~LK~K~tw~w~~~Y 103 (267)
T PF07672_consen 77 --ENS-TLS--KKPSYKSILKEKETWKWILIY 103 (267)
T ss_pred --ccc-ccc--ccchHHHHHccchHHHHHHHH
Confidence 000 111 124567899999998755444
No 232
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.52 E-value=0.0038 Score=53.61 Aligned_cols=134 Identities=13% Similarity=0.142 Sum_probs=77.4
Q ss_pred HHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHH---HHHh
Q 021674 134 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF---LTQL 210 (309)
Q Consensus 134 ~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~ 210 (309)
.|.+..|-|. +++.+|+|.+|...+.....++..+ ++..|.+.||++.+.. .+........... +...
T Consensus 18 ~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~-------l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 18 TYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV-------LLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred ccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH-------HHHHHHHHHHHHHHHHHHHh
Confidence 4666666665 4567899999999998888888876 4889999999986521 1111111111111 1111
Q ss_pred hccC-chHHHHHHHHHHHhh-hhhhhcc-hhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 211 SHVD-SPAMAVLCMACSQGT-DAFSQSG-LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 211 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
...+ .+.+.+++.....+. ..+.++. +..+.+. -|+.||.+.|+.-...-+++++-..+.-.+.+.
T Consensus 89 ~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~N-FP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 89 GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRN-FPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHh-CccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 1122 233333222211111 1222222 2333344 467899999999988888888777777666555
No 233
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.49 E-value=0.0025 Score=59.58 Aligned_cols=46 Identities=17% Similarity=0.281 Sum_probs=37.7
Q ss_pred cchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh
Q 021674 7 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 52 (309)
Q Consensus 7 ~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~ 52 (309)
+.....-+++++....++|.|+++..+.+..+|.++||.++..+..
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 3455566799999989999999999999989999999888766544
No 234
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.43 E-value=0.0032 Score=60.12 Aligned_cols=130 Identities=18% Similarity=0.200 Sum_probs=75.2
Q ss_pred hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHH-HHHHHhhhhhh-
Q 021674 156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFS- 233 (309)
Q Consensus 156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 233 (309)
.+++.+...++..++.++.|+++|++|||+.. .+..+.+....+.. ....+..+.... ...+++.+...
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l------~~~~~~~~iG~ii~---~~a~~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTL------LLAVVLFLIGAIII---ALAPSWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHH---HHhhhHHHHHHHHHHhccchhhhhh
Confidence 37888889999999999999999999987311 11111111111111 112233333322 22333333221
Q ss_pred hcchhhhhhccCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccC--CchHHHHHHHHHHHHHHHH
Q 021674 234 QSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG--SWDDVFKVSVGLYLVGTAV 297 (309)
Q Consensus 234 ~~~~~~~~~~~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~ 297 (309)
..+++ ..|..| +.||.-.+..+....+|..++ .+.+...++. +|+..+.+..+..++-.+.
T Consensus 162 ~~piy--~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 162 LAPVY--ISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred cchhh--HhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 12233 345555 589999998888877665555 7777776653 7987776655555544444
No 235
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.23 E-value=0.1 Score=47.98 Aligned_cols=173 Identities=11% Similarity=0.083 Sum_probs=88.6
Q ss_pred hhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc--CCcchhHhhhhHHHHHHHHHHhhcccCCCC---
Q 021674 10 PAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWLSKAHSSPAE--- 84 (309)
Q Consensus 10 p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~--gWr~~F~i~~~~~~v~~~~~~~~~~~~p~~--- 84 (309)
.+-++++-...|+++--|+.+...+..-+|-.++..+|-.++..- +.+..+++ .........++-...|..++.
T Consensus 112 vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~i-sl~~~~~a~~~~~fLP~~~~S~~f 190 (412)
T PF01770_consen 112 VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYI-SLASVSLALLIALFLPMPKRSLFF 190 (412)
T ss_pred HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH-HHHHHHHHHHHHHHcCCCCcccce
Confidence 345678888899999999999999999999999999998776632 33333333 221111111221222221110
Q ss_pred CCCCC------HHHHHHH---Hhcc--CCCCCC-CCC-----------ChhHhhcchHHHHHHHHHHHHHHHHHHHHHhH
Q 021674 85 DPQLR------PAEKKLI---VSSC--ASKEPV-KTI-----------PWGLILSKPPVWALIVSHFCHNWGTFILLTWM 141 (309)
Q Consensus 85 ~~~~~------~~~~~~~---~~~~--~~~~~~-~~~-----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wl 141 (309)
+++.. +.+.+.. .++. .++++. .+. ++++..+||.++.-.+=..+...+++-+.++.
T Consensus 191 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYv 270 (412)
T PF01770_consen 191 HRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYV 270 (412)
T ss_pred eccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHH
Confidence 00000 0000000 0000 000000 000 12334466664432222223334556666666
Q ss_pred HHHHHHH--hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674 142 PTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS 183 (309)
Q Consensus 142 p~~l~~~--~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~ 183 (309)
-....+. .+-+..--|..-....+.+.++.+..|++..++.+
T Consensus 271 Q~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~ 314 (412)
T PF01770_consen 271 QSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR 314 (412)
T ss_pred HHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH
Confidence 6666544 23333345777777777888888899998555543
No 236
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.19 E-value=0.0028 Score=59.15 Aligned_cols=152 Identities=21% Similarity=0.199 Sum_probs=84.7
Q ss_pred HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH---HcCCChhhHHHHHHHHhhHHHH---HHHHHhhc-cCc
Q 021674 143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV---SKGLSVTTVRKIMQSIGFLGPA---FFLTQLSH-VDS 215 (309)
Q Consensus 143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~---~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~ 215 (309)
.|+++++|+++.+...+.....+-- ...++.|.++|-+- .|| |..+.++.+... ..+..... .++
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr-------~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRR-------KPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcc-------hHHHHHHHHHHHHHHHHHHhcccccch
Confidence 4788999999999887776555433 45779999999973 232 111122222221 11111111 112
Q ss_pred hHHHHHH-HHHHHhhhh--hhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHH
Q 021674 216 PAMAVLC-MACSQGTDA--FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 292 (309)
Q Consensus 216 ~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 292 (309)
...+..+ +...++... ...-+.+.......|+.+|.--+.....+.+|+.++..+.|.+.+..+++..|.+.+.+..
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPL 165 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHH
Confidence 2222222 111121110 0111222222223444477777777888899999999999999999778777877776666
Q ss_pred HHHHHHHhhc
Q 021674 293 VGTAVWNLFS 302 (309)
Q Consensus 293 ~~~~~~~~~~ 302 (309)
+..+...++.
T Consensus 166 l~~~~~~~~~ 175 (433)
T PF03092_consen 166 LMLIVALFLL 175 (433)
T ss_pred HHHHHHHHhh
Confidence 5554444443
No 237
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.15 E-value=0.022 Score=53.58 Aligned_cols=126 Identities=21% Similarity=0.145 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhhcchhhhhhc
Q 021674 164 WLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD 243 (309)
Q Consensus 164 ~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
++...+.++.-|.++||+|||... .+.....+...+..... .++....... .+......+..++...|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L------~~~~~~~~l~~~~~~~~-----~~~~~~~~~l-~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVL------LLPLFGTILPALCLLFQ-----GYWFFLLLGL-SGGFSAIFSVGFAYVAD 139 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhH------HHHHHHHHHhHHHHHHH-----HHHHhhhccc-ccchhhhhhhhhhheee
Confidence 567778888999999999987321 11122222222222111 1222221111 11111112233444444
Q ss_pred cCC-CchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhh
Q 021674 244 IAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 244 ~~~-~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
... +.|....|+.+.....+..++|.+.+.+....++..+|.+..+..++..+-..++
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~ 198 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLF 198 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhc
Confidence 443 5799999999998889999999999999999889999988887777666554444
No 238
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.08 E-value=0.062 Score=48.24 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=35.1
Q ss_pred HHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 147 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 147 ~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
+.+|++..+.+.+.....+...+.+.+.|.++||+|||
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk 99 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK 99 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 46899999999999999999999999999999999977
No 239
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.08 E-value=0.11 Score=51.08 Aligned_cols=72 Identities=21% Similarity=0.264 Sum_probs=57.8
Q ss_pred CcccccchhhHHHHHhccCCCc---chhHHHHHHHhhhhhHHHHhhhhHHHHhhhc-------CCcchhHhhhhHHHHHH
Q 021674 2 GIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGSLGTVWF 71 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~---~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~-------gWr~~F~i~~~~~~v~~ 71 (309)
.+|.|+.-|+..+...|-++++ +|-+...++..+.++|+.++.++.+++.+.. +|...|.+.++..++.+
T Consensus 96 a~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 96 ALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL 175 (654)
T ss_pred HhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence 3688899999999999999754 3677888889999999999999999887443 69999998776665544
Q ss_pred HH
Q 021674 72 TV 73 (309)
Q Consensus 72 ~~ 73 (309)
++
T Consensus 176 lv 177 (654)
T TIGR00926 176 IV 177 (654)
T ss_pred HH
Confidence 33
No 240
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.08 E-value=0.057 Score=51.08 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=34.9
Q ss_pred HHHHHHHhHhHhhhhhHHHhHHHhhccc-CC-------chHHHHHHHHHHHHHHHHHHhhcCC
Q 021674 250 GVLLGLSNTAGVLAGVFGTAATGYILQH-GS-------WDDVFKVSVGLYLVGTAVWNLFSTG 304 (309)
Q Consensus 250 g~a~~~~~~~~~lgg~i~~~~~g~l~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (309)
+..++.-...+++|+.+.-.+.-.++.. ++ .+..+...+...++..+.+.++.++
T Consensus 187 ~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~ 249 (477)
T PF11700_consen 187 GRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPD 249 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7778887888899887776654443222 21 3556776777766666665655433
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.0041 Score=58.83 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=92.4
Q ss_pred HHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH
Q 021674 146 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 225 (309)
Q Consensus 146 ~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (309)
+++.++.-.+-+....++.++..++.+.+|++.||+.-+ +.+....+....+........+-+....+-+..
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls--------~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~ll 144 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLS--------KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLL 144 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChH--------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 355667677788888899999999999999999999622 223322222222222222211222232222222
Q ss_pred HHhhhhhhhcchhhhhh-ccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc------cCCchHHHHHHHHHHHHHHHHH
Q 021674 226 SQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ------HGSWDDVFKVSVGLYLVGTAVW 298 (309)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~------~~~~~~~~~~~~~~~~~~~~~~ 298 (309)
|..= ....+....... -..+++++.-.++.+....+|+++|..+...+.+ ..+|++.|++-+++.++..++.
T Consensus 145 Gl~e-s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 145 GLFE-SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHh-cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 2211 111222222222 2356789999999999999999999888877543 2579999999887777666665
Q ss_pred HhhcCCcc
Q 021674 299 NLFSTGEK 306 (309)
Q Consensus 299 ~~~~~~~~ 306 (309)
.++..+++
T Consensus 224 f~~lp~~P 231 (495)
T KOG2533|consen 224 FFFLPDNP 231 (495)
T ss_pred EEEecCCh
Confidence 55554544
No 242
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.00 E-value=0.041 Score=49.12 Aligned_cols=279 Identities=11% Similarity=0.105 Sum_probs=126.1
Q ss_pred hHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhh--hhHHHHHHHHHHhhcccCCCCCCCC
Q 021674 11 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF--GSLGTVWFTVWLSKAHSSPAEDPQL 88 (309)
Q Consensus 11 ~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~--~~~~~v~~~~~~~~~~~~p~~~~~~ 88 (309)
+-++++-+-+||+++-++.|.--+..-.|-..|..++-.++.. +|-.-+..+ ..-......++-...|. |+++--.
T Consensus 114 AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~-~~~sy~~LN~ISL~~~~ia~~~A~fLP~-v~rSl~f 191 (433)
T KOG3810|consen 114 AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL-ETLSYTTLNYISLAEVTIAVLLALFLPR-VKRSLYF 191 (433)
T ss_pred hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh-cccchhhhchhhHHHHHHHHHHHhhCCC-Cchhhhh
Confidence 4467778888999999999999999888888888888877664 333333221 11111111111112222 2211101
Q ss_pred CHHHHHHHHhccCCCCCC-CCC------------ChhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh-CCCcc
Q 021674 89 RPAEKKLIVSSCASKEPV-KTI------------PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL-HFNLT 154 (309)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~-g~s~~ 154 (309)
+..+++...++.++..++ +.. ++++..|||++..=.+=..+...++|-+.++.-....+.. .-...
T Consensus 192 ~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~v 271 (433)
T KOG3810|consen 192 HRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANV 271 (433)
T ss_pred hcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhh
Confidence 111111001110000010 000 1233456776432111112223456666666655555432 00111
Q ss_pred chhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccCchHHHHHHHHHHHhhhhhhh
Q 021674 155 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 234 (309)
Q Consensus 155 ~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
--|-.-.+..+.+.++.+..|++.-++.|.+ ..++.++...-+.++..+..+.+.++........-..-.+..
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g-------~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~i 344 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWG-------DLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTI 344 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhh-------HHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhh
Confidence 1244444445567777788888876654432 223333333333334434444444332222111100000101
Q ss_pred c-chhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCC-----------chHHHHHHHHHHHHHHHHHHhh
Q 021674 235 S-GLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-----------WDDVFKVSVGLYLVGTAVWNLF 301 (309)
Q Consensus 235 ~-~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 301 (309)
+ ..+....+.+.+.-|...|++.+..- ++-..+.-.++|..+ |..-|.+.++++++........
T Consensus 345 tiA~~~iA~nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 345 TIATFQIARNLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hHHHHHHHHhhhhhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 1 01111223344556777776444432 233344444556322 4456788888888886554444
No 243
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.82 E-value=0.027 Score=50.54 Aligned_cols=145 Identities=16% Similarity=0.171 Sum_probs=79.9
Q ss_pred CCcchhHHHHHHH-hhhhhHHHHhhhhHHHHhhhcCC--cchhHhhhhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHH
Q 021674 21 PVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV 97 (309)
Q Consensus 21 p~~~rg~~~g~~~-~~~~~g~~lg~~l~~~l~~~~gW--r~~F~i~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 97 (309)
|++..+.-.+... .++++-++++..++-++++..|- .++|....++.++..++.....+|...++.+.++..+..
T Consensus 156 ~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~-- 233 (354)
T PF05631_consen 156 PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSF-- 233 (354)
T ss_pred ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHH--
Confidence 4444444444333 34444556666777777887765 778876444444333332222333222211100000000
Q ss_pred hccCCCCCCCCCChhHhhcchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHH
Q 021674 98 SSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGW 176 (309)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~ 176 (309)
...++.+++||+.+.+-....+....+|.+. .|.|..-.+ + ...--|++.+-..++..+|+.+..+
T Consensus 234 ----------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~--~-~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 234 ----------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD--D-EELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred ----------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC--C-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 1124567889999988888888888887776 667665521 2 1233677777666777777777665
Q ss_pred HHHH
Q 021674 177 IADT 180 (309)
Q Consensus 177 l~dr 180 (309)
+..|
T Consensus 301 l~s~ 304 (354)
T PF05631_consen 301 LLSK 304 (354)
T ss_pred HHhC
Confidence 5543
No 244
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.80 E-value=0.019 Score=52.36 Aligned_cols=134 Identities=15% Similarity=0.055 Sum_probs=76.4
Q ss_pred HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH-----HcCCChhhHHHHHHHHhhHHHHHHHHHhhc-----c
Q 021674 144 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV-----SKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-----V 213 (309)
Q Consensus 144 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~-----~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 213 (309)
.+..+++++..-.+.+.....+... ..+..|+.||+.. ||...++.. ......+..........+.. .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G-~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGG-TLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHH-HHHHHHHHHHHHHHHHHHcccccccc
Confidence 3456788888888888877765544 6889999999988 665544432 11221211111111111111 0
Q ss_pred CchHH--HHH---HHHHHHhhhhhhhcchhhhhhc-cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCc
Q 021674 214 DSPAM--AVL---CMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 280 (309)
Q Consensus 214 ~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~ 280 (309)
.+.+. ... +...+.+... ..+...+...| .+|++|+.+.++.-..--+|.+++..+.|.++|..+.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~-s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHA-SGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhH-hHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 11221 111 1122222221 12223333334 4567899999999988888999999999999998543
No 245
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.50 E-value=0.78 Score=43.32 Aligned_cols=165 Identities=13% Similarity=0.102 Sum_probs=87.2
Q ss_pred HHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh--------cCCc----chhHhhhhHHHHHHHHHHhhcc
Q 021674 12 MNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWP----SVFYSFGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 12 ~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~--------~gWr----~~F~i~~~~~~v~~~~~~~~~~ 79 (309)
-+....|.++.+|-.|..++++.+.++|.++++.+..++.+. -.|. ..+.+.++.+.+.. ..++...
T Consensus 150 FW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~~~l~ 228 (472)
T TIGR00769 150 FWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII-LLYWWVN 228 (472)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 356788999999999999999999999999999998888732 2352 23343333333322 2222221
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCCC--CCChhHhhcchHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHhCCCccc-
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPVK--TIPWGLILSKPPVWALIVSHFCHNWGTFIL-LTWMPTYYNQVLHFNLTE- 155 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~wlp~~l~~~~g~s~~~- 155 (309)
+....+|+...++++ +++++++. ....+.++|+|.++.+.....+.+...--+ ..|- ..+.+.+ -++.+
T Consensus 229 ~~~~~~~~~~~~~~~-----~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k-~~v~~~~-p~~~~~ 301 (472)
T TIGR00769 229 RNVLTDPRSYNPALK-----EKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWK-SKLKAQY-PSPNEY 301 (472)
T ss_pred hcccCCccccchhhc-----cccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-CCHHHH
Confidence 111112221111110 01111110 113567889998887766655543332222 2333 2333322 23322
Q ss_pred ---hhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 156 ---SGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 156 ---~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
.|.+....++...+..++++++.+|+|.+
T Consensus 302 ~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 302 SAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 23333444455555566668888888754
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.25 E-value=0.01 Score=54.80 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=31.1
Q ss_pred CCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 021674 151 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 187 (309)
Q Consensus 151 ~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~ 187 (309)
++....+.......++..+|.+++||+.||+|||+..
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY 117 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY 117 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh
Confidence 4556678888888899999999999999999988643
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.15 E-value=0.29 Score=46.37 Aligned_cols=184 Identities=11% Similarity=0.037 Sum_probs=92.0
Q ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHH
Q 021674 113 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 192 (309)
Q Consensus 113 ~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~ 192 (309)
+++.++......+...+...+.-.+.+++==++++ ++-...--|....+-..+=...-++.+++..|.|+-+...
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~---- 440 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY---- 440 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee----
Confidence 45666655444444444444444455666344544 5655555554444444555666778899999998543211
Q ss_pred HHHHHHhhHHHHHHHHHhhccCchHHHHHHHHH-HHhhhhhhhcchhhhh-hccCCCchHHHHHHHhHhHh-hhhhHHHh
Q 021674 193 KIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC-SQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGV-LAGVFGTA 269 (309)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~g~a~~~~~~~~~-lgg~i~~~ 269 (309)
.++.....=+......+++|+.+-.=.. +.....+ .....++. ...+|+.++++-++...... +|=.+|..
T Consensus 441 -----lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~ali-Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 441 -----LGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALI-WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred -----ehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHH-HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 1111111112222344556543221111 1111111 11111222 34577888888888776553 55578899
Q ss_pred HHHhhcccCCchHHHHHHHHHHH---HHHHHHHhhcCCccc
Q 021674 270 ATGYILQHGSWDDVFKVSVGLYL---VGTAVWNLFSTGEKV 307 (309)
Q Consensus 270 ~~g~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 307 (309)
++|.+.+..+-+..|....+.++ +..+...+..+|+..
T Consensus 515 IGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~~~~ 555 (618)
T KOG3762|consen 515 IGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLKRRGF 555 (618)
T ss_pred hhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhccccc
Confidence 99998887655555544332222 333444444444443
No 248
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.97 E-value=0.61 Score=43.69 Aligned_cols=46 Identities=11% Similarity=0.166 Sum_probs=40.4
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhh
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 46 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l 46 (309)
.|+|.+..+.+--.+++|+.+++++.+..++.=+....+.++|..+
T Consensus 112 lG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 112 LGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHh
Confidence 3889999999999999999999999999999888888888777654
No 249
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.95 E-value=0.95 Score=42.21 Aligned_cols=66 Identities=18% Similarity=0.315 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
..+.+....++..++-=...+-.|.|+.+.+.-+..-.+.+-....+...+.++..|...||..|.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl 68 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRL 68 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcch
Confidence 345677888888888777777889999988666655566666666677778888889999987654
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=95.93 E-value=0.00034 Score=65.33 Aligned_cols=128 Identities=15% Similarity=0.150 Sum_probs=68.1
Q ss_pred hhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHHhhccC---chHHHHHH-HHHHHhhhh
Q 021674 156 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD---SPAMAVLC-MACSQGTDA 231 (309)
Q Consensus 156 ~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~ 231 (309)
.++..+...++..+|++++|+++||+|||+..... ........+. ....+ +....... ...+++.+.
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~------~~~~~i~~~~---~~~~~~~~~~~~~~~~R~~~G~~~g~ 118 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIIS------ALLMIIGSIL---IAFAPSYNNFWMLLIGRFLIGFGIGG 118 (451)
T ss_pred HHHHHHHHHhhhccccccccccccccccccccccc------cccccccccc---cccccccccccccccccccccccccc
Confidence 46777888899999999999999999988532211 0111111111 11111 22222221 222333221
Q ss_pred -hhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc---CCchHHHHHHHHHHHHH
Q 021674 232 -FSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVG 294 (309)
Q Consensus 232 -~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~ 294 (309)
......+ ..|. +++.|+...++.+....+|..++..+.-.+.+. .+|+..+.+.....++.
T Consensus 119 ~~~~~~~~--~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~ 184 (451)
T PF00083_consen 119 AYVVSPIY--ISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV 184 (451)
T ss_pred cccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1112222 2344 557888888888887777666665554333222 34877776655555433
No 251
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.91 E-value=0.056 Score=38.04 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=42.4
Q ss_pred HHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674 131 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 182 (309)
Q Consensus 131 ~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~ 182 (309)
..+.+.+..-+|...+ +.++|..+++.+.+...++-.+|.+...++.++..
T Consensus 5 GigRFayTplLP~M~~-~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~ 55 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQA-DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSR 55 (85)
T ss_pred hhHHHHHHhHhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3566777777776664 57999999999999999999999999998888744
No 252
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.90 E-value=0.095 Score=49.23 Aligned_cols=41 Identities=20% Similarity=0.042 Sum_probs=33.6
Q ss_pred HHHHH-HhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674 143 TYYNQ-VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS 183 (309)
Q Consensus 143 ~~l~~-~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~ 183 (309)
+|+++ +++-+...-|+......++..++++.+|+.+.|.++
T Consensus 59 pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~ 100 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGS 100 (488)
T ss_pred hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCC
Confidence 56654 356666778999999999999999999999999873
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.90 E-value=0.25 Score=45.48 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=36.4
Q ss_pred hccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCC--cchhHhhhhHHHHHH
Q 021674 17 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWF 71 (309)
Q Consensus 17 ~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gW--r~~F~i~~~~~~v~~ 71 (309)
+..+|+ ..++-|++|-+.|+++|+..=..+.+ .|+ |..+.+..++.++..
T Consensus 137 t~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~ 188 (402)
T PF02487_consen 137 THFYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFL 188 (402)
T ss_pred HHhcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHH
Confidence 456664 36899999999999999887666666 777 667777666665543
No 254
>PRK03612 spermidine synthase; Provisional
Probab=95.81 E-value=1 Score=43.18 Aligned_cols=53 Identities=15% Similarity=0.099 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH
Q 021674 128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 180 (309)
Q Consensus 128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr 180 (309)
++.......+-.-.-..+....|-+....+.+.+.+.+++.+|+.+++++.++
T Consensus 24 f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 24 FVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33333333444444456666678888888888888888888888888877644
No 255
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.70 E-value=2 Score=40.84 Aligned_cols=165 Identities=15% Similarity=0.170 Sum_probs=85.9
Q ss_pred HHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh---------hcCCcchhHh----hhhHHHHHHHHHHhhcc
Q 021674 13 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------RFGWPSVFYS----FGSLGTVWFTVWLSKAH 79 (309)
Q Consensus 13 ~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~---------~~gWr~~F~i----~~~~~~v~~~~~~~~~~ 79 (309)
+....|.++.+|-.|..++++.+.++|.+++..+..++.+ .-.|...+.. ....+.+.. ..++...
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~-~~~~~~~ 244 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVII-LLYRYMN 244 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 5677889999999999999999999999999999888877 2246654432 222222221 2222221
Q ss_pred cCCCCCCCCCHHHHHHHHhccCCCCCC-CCCChhHhhcchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHhCCCccc--
Q 021674 80 SSPAEDPQLRPAEKKLIVSSCASKEPV-KTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQVLHFNLTE-- 155 (309)
Q Consensus 80 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~l~~~~g~s~~~-- 155 (309)
+...++++..++++ ++++++++. -....+.++|+|.+..++....+.+...--+- .|- ..+++.+ -++.+
T Consensus 245 ~~vl~~~~~~~~~~----~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK-~~lk~~~-~~~~~ys 318 (491)
T PF03219_consen 245 KNVLTDPRFYPSAK----KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWK-SQLKQLY-PDPNDYS 318 (491)
T ss_pred HHccCccccchhhh----cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-CCchHHH
Confidence 11111111111110 000011100 01134667889988876665554433322222 222 2233222 23332
Q ss_pred --hhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 156 --SGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 156 --~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
.|-.....++...+-.++++.+.+|+|.+
T Consensus 319 afmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 319 AFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 23334445555666667778888777754
No 256
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=95.65 E-value=0.3 Score=44.31 Aligned_cols=49 Identities=22% Similarity=0.224 Sum_probs=40.8
Q ss_pred HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674 137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~ 185 (309)
+...+-+-+++.-|.+..+..++......++.+++..-|.++||+|||+
T Consensus 96 ~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~ 144 (528)
T KOG0253|consen 96 LLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRK 144 (528)
T ss_pred HHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcch
Confidence 3344556677788888889999988888999999999999999999874
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.46 E-value=0.3 Score=45.19 Aligned_cols=128 Identities=15% Similarity=0.079 Sum_probs=68.0
Q ss_pred HHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhH-HHHHHHHHhhc-cCchHHHH
Q 021674 143 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQLSH-VDSPAMAV 220 (309)
Q Consensus 143 ~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~ 220 (309)
.|.++.+| |...+-+...+..+......+.+-|+.||+|-|... .+-.+.-. +..+-+..... .++..+--
T Consensus 69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~------llgt~ln~iGa~Ir~iss~p~v~~~f~~~ 141 (480)
T KOG2563|consen 69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL------LLGTVLNGIGAWIRLISSLPFVPPLFRRP 141 (480)
T ss_pred HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH------HHHHHHHHHHHHHhhhccCccccccchhh
Confidence 56666677 556666777777788888899999999999966311 11111111 11111111111 11211211
Q ss_pred HHHHHHHhhhhhhhc---chhh--hhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcccC
Q 021674 221 LCMACSQGTDAFSQS---GLYS--NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 278 (309)
Q Consensus 221 ~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~ 278 (309)
++. .+-...+.++. .+-+ ...=++|++|++|..+..+...+|.+++-.+-..++.+.
T Consensus 142 l~~-~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 142 LTH-TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhH-HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 111 11111111111 1101 112257888999988877777888888877777776653
No 258
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.11 E-value=0.035 Score=47.54 Aligned_cols=69 Identities=30% Similarity=0.586 Sum_probs=56.6
Q ss_pred CCcccccchhhHHHHHhccCCC-cchhHHHHHHHh-hhhhHHHHhhhhHHHHhhh--cCCcchhHhhhhHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYS-GMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTV 69 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~-~~rg~~~g~~~~-~~~~g~~lg~~l~~~l~~~--~gWr~~F~i~~~~~~v 69 (309)
+|++.|...|....++.+++|+ ++|+...+.... ...+|.++++.+++.+.+. .+||+.|.+.......
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 104 QGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4788889999999999999998 789999999999 5888888888777776654 6899987775555543
No 259
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.97 E-value=0.031 Score=50.99 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=58.6
Q ss_pred CcccccchhhHHHHHhccCCCc---chhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHH
Q 021674 2 GIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 70 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~---~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~ 70 (309)
++|.|+.=|+...+.+|-++++ +|.+...++..+.++|+.++..+.+++-++.||.+.|.+.++.-++.
T Consensus 44 a~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~ 115 (372)
T PF00854_consen 44 AVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLA 115 (372)
T ss_dssp HHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHH
T ss_pred HhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHH
Confidence 5788999999999999999765 56777888999999999999999999999999999999866654443
No 260
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=94.89 E-value=0.44 Score=43.82 Aligned_cols=163 Identities=19% Similarity=0.126 Sum_probs=80.7
Q ss_pred HHHhHHHHHHHHhCC---Cccch----hhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHHHH
Q 021674 137 LLTWMPTYYNQVLHF---NLTES----GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ 209 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~---s~~~~----g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (309)
..+..|.|+++..+- ++.+. +...++..+...+-+++-|.++|+.|+|++... .+..+... ..+ ...
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~----~f~~i~i~-~~~-~L~ 107 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFG----FFTAIGII-STF-LLW 107 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHH----HHHHHHHH-HHH-HHH
Confidence 346778888866554 55543 444455566666777888999999998764321 11111111 111 111
Q ss_pred hhccCchHHH-HHHHHHHHhhhhhhhcchhhhhhcc-CCCchHHHHHHHhHhHhhhhhHHHhHH--Hhhcc---------
Q 021674 210 LSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAAT--GYILQ--------- 276 (309)
Q Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~~~~~~~~~lgg~i~~~~~--g~l~~--------- 276 (309)
.....+.++. +++++.......+++....+...+. +++..+..+++.-..+++|+.+.-..+ +.+..
T Consensus 108 ~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l 187 (438)
T COG2270 108 FIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIIL 187 (438)
T ss_pred HhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEe
Confidence 1122133332 2333222111111111111222222 233445555555666777775544332 11111
Q ss_pred -------cCCchHHHHHHHHHHHHHHHHHHhhcCCc
Q 021674 277 -------HGSWDDVFKVSVGLYLVGTAVWNLFSTGE 305 (309)
Q Consensus 277 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (309)
...-+.++.+.++..++-.+.+.+..++-
T Consensus 188 ~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~ 223 (438)
T COG2270 188 LGLPPADGEDVRITGLLAALWWLLFALPMILNVHDA 223 (438)
T ss_pred eccCccccccchhHHHHHHHHHHHHHhHHHhccccc
Confidence 12345678888888888887777665543
No 261
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.44 E-value=2.7 Score=35.58 Aligned_cols=144 Identities=20% Similarity=0.259 Sum_probs=70.8
Q ss_pred HHHhHHHHHHHHhCCCc--cchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHh-hHHHHHHHHHhhcc
Q 021674 137 LLTWMPTYYNQVLHFNL--TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG-FLGPAFFLTQLSHV 213 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~--~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 213 (309)
.....|.+..+ .+.+. ...+.......+...++.+..|+++||.|||+. ...... ......... ....
T Consensus 21 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~~~~~~~~~~~~~~~-~~~~ 91 (338)
T COG0477 21 LSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKV-------LIIGLLLFLLGTLLLA-LAPN 91 (338)
T ss_pred HHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHH-------HHHHHHHHHHHHHHHH-hCcc
Confidence 33445555544 34444 467888888888888888999999999976521 111111 111111111 1111
Q ss_pred CchHHHHHHHH-HHHhhhhhhhcchhhhhhccCC--CchHHHHHHHhH-hHhhhhhHHHhHHHhhccc--CCchHHHHHH
Q 021674 214 DSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNT-AGVLAGVFGTAATGYILQH--GSWDDVFKVS 287 (309)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~g~a~~~~~~-~~~lgg~i~~~~~g~l~~~--~~~~~~~~~~ 287 (309)
........... .+.+.+.. .+.......+..| +.++...+.... ...++..++|.+.+.+.+. .+|+..+...
T Consensus 92 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 92 VGLALLLILRLLQGLGGGGL-LPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred chHHHHHHHHHHHHhhhHHH-HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 11222221111 12221111 1111122233344 367777777666 4666777777666666554 4576655444
Q ss_pred HHH
Q 021674 288 VGL 290 (309)
Q Consensus 288 ~~~ 290 (309)
...
T Consensus 171 ~~~ 173 (338)
T COG0477 171 ALL 173 (338)
T ss_pred HHH
Confidence 433
No 262
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=94.41 E-value=0.04 Score=51.90 Aligned_cols=72 Identities=25% Similarity=0.302 Sum_probs=62.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhh-hhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 72 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~-~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v~~~ 72 (309)
||+-.+..|.++.+++++..||+-|..+++++... ..+|--+|..+||.+.+.+|=|..|.+.++..+++++
T Consensus 469 qgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 469 QGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999998765 4577888899999999999999999998877766543
No 263
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.25 E-value=0.25 Score=45.86 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=38.6
Q ss_pred hhHHHHHhccCCCcchhH-HHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHh
Q 021674 10 PAMNNILSKWVPVAERSR-SLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 62 (309)
Q Consensus 10 p~~~~~i~~~~p~~~rg~-~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i 62 (309)
..+-++++|....+++-+ ++++...-..+|+.+|..++. +.|||-.|-.
T Consensus 161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~----y~~~~~~~~F 210 (498)
T KOG0637|consen 161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS----YLGLYKIFPF 210 (498)
T ss_pred hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc----ccCceEEeeh
Confidence 345678899996666666 999999999999999998887 5678877643
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.59 E-value=6.6 Score=37.04 Aligned_cols=39 Identities=13% Similarity=0.154 Sum_probs=33.1
Q ss_pred HHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh
Q 021674 14 NILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 52 (309)
Q Consensus 14 ~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~ 52 (309)
....|..+.+|-.|..++++.+.+++..++..+..++.+
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345677788899999999999999999999888887765
No 265
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=92.08 E-value=0.18 Score=44.79 Aligned_cols=59 Identities=12% Similarity=0.119 Sum_probs=49.4
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHh
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 62 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i 62 (309)
|++.+..+|...+...+.+|++ .+++.++.. ...+|..+.|++.|.+.|+.|-|..|++
T Consensus 241 g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~-~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 241 GLFNSIMFPTIFSLALNALGRH-TSQGSGILC-LAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHH-HHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 6788899999999999998853 556667764 5578999999999999999999999985
No 266
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.46 E-value=12 Score=35.46 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=27.9
Q ss_pred cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhcc
Q 021674 244 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 276 (309)
Q Consensus 244 ~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~ 276 (309)
..+++...-.++.+.++++|..+++.+..++.+
T Consensus 158 ~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 158 TTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678888899999999999999999888763
No 267
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=90.92 E-value=5.9 Score=36.37 Aligned_cols=164 Identities=13% Similarity=-0.039 Sum_probs=83.1
Q ss_pred hhHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhh
Q 021674 111 WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 190 (309)
Q Consensus 111 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~ 190 (309)
+++++|-|....++......-.++-+--.-.+.-+.| +|++..+-++...+..-...+.....|+++.+ .|++....
T Consensus 258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~l 334 (510)
T KOG3574|consen 258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFL 334 (510)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHH
Confidence 3566777777666666666666666666666666654 79998888777654444555555555555442 23322221
Q ss_pred HHHHHHHHhhHHHHHHHHHhhccCc-----hHHHHHHHHHHHhhhhhhhc----chhhh-hhccCCCchHHHHHHHhHhH
Q 021674 191 VRKIMQSIGFLGPAFFLTQLSHVDS-----PAMAVLCMACSQGTDAFSQS----GLYSN-HQDIAPRYSGVLLGLSNTAG 260 (309)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~g~a~~~~~~~~ 260 (309)
.+...-................... +....++..+.......... ...+- .+-.+|+.-|+-+++.|+..
T Consensus 335 ka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLs 414 (510)
T KOG3574|consen 335 KAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLS 414 (510)
T ss_pred HhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHH
Confidence 1111111111111111111111111 11111111111111111011 11111 12346778899999999999
Q ss_pred hhhhhHHHhHHHhhccc
Q 021674 261 VLAGVFGTAATGYILQH 277 (309)
Q Consensus 261 ~lgg~i~~~~~g~l~~~ 277 (309)
|+||..=..+...+.|.
T Consensus 415 nLGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 415 NLGGNWPGTVALWLADG 431 (510)
T ss_pred HhcCCcHHHHHHHhccc
Confidence 99999888888888874
No 268
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=90.67 E-value=3.3 Score=37.66 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=47.9
Q ss_pred CCchHHHHHHHhHhHhhhhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHhhcCC
Q 021674 246 PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 304 (309)
Q Consensus 246 ~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (309)
++++...........|+|+.+++.+.+++-++.+|...|.+..+..+++.+++..-.++
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~ 125 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKR 125 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcC
Confidence 45677778888999999999999999999989999999999998888887765554333
No 269
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=87.73 E-value=1.3 Score=38.18 Aligned_cols=49 Identities=8% Similarity=-0.072 Sum_probs=36.1
Q ss_pred ccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh
Q 021674 4 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 53 (309)
Q Consensus 4 g~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~ 53 (309)
+.+....++...-.+.|| ++||++.|+.-+...+++.+=..+-..+-+.
T Consensus 109 s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 109 SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 333444566677778998 5899999999999999987766665555444
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=87.53 E-value=13 Score=29.52 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=22.2
Q ss_pred hhhH-hhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 156 SGLF-CVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 156 ~g~~-~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
.|.. +.+......+.+++++.+.+|+|.|
T Consensus 38 ~G~~slai~Y~~~~~s~l~~P~iv~~lg~K 67 (156)
T PF05978_consen 38 LGYYSLAILYGSFAISCLFAPSIVNKLGPK 67 (156)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHhhH
Confidence 3444 4566677888899999999999865
No 271
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=87.53 E-value=5.1 Score=38.48 Aligned_cols=70 Identities=17% Similarity=0.297 Sum_probs=38.9
Q ss_pred hHhhcchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CccchhhHhhhhHHHHHHHHHHHHHHHHHHHH
Q 021674 112 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF-NLTESGLFCVLPWLTMAFSANLGGWIADTLVS 183 (309)
Q Consensus 112 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~-s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~ 183 (309)
.++||.|+--. .++.+. ..|.-.+..-+-..+....|+ ++.+-|.++....+...+.+.++|+.+-|+-+
T Consensus 252 gDVFR~P~~~~-lls~lv-G~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 252 GDVFRPPKHPM-LLSALV-GTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred HHHhcCcCCch-HHHhHh-cchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 56788876322 222222 223222222222233334454 66666777766677778888888888888753
No 272
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=86.26 E-value=1.5 Score=40.81 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHH----HHHcCCCh
Q 021674 124 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT----LVSKGLSV 188 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr----~~~r~~~~ 188 (309)
....+...++.-.-.+++|+|+++ .|.+-.-.+.+-....+.+.+..++.|..+|| +||||..+
T Consensus 38 ~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 38 ASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchH
Confidence 333344444444455899999986 59988777777776777888888999999998 56665433
No 273
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.59 E-value=0.82 Score=40.12 Aligned_cols=57 Identities=14% Similarity=0.125 Sum_probs=46.2
Q ss_pred HHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhc---CCcchhHh-hhhHHHH
Q 021674 13 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GWPSVFYS-FGSLGTV 69 (309)
Q Consensus 13 ~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~---gWr~~F~i-~~~~~~v 69 (309)
+..++...|+++.|++.|+..+..++|-.+.+.+.+.+.++- .|-.+|++ ++.+++.
T Consensus 374 WP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~ 434 (459)
T KOG4686|consen 374 WPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALT 434 (459)
T ss_pred hhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHH
Confidence 446677889999999999999999999999999999998864 47777775 3444443
No 274
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=82.89 E-value=49 Score=32.27 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHhhHHHHHHH
Q 021674 128 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL 207 (309)
Q Consensus 128 ~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~ 207 (309)
.+-..++|++..-+=.|+.++++.+...+.-......-......+.+++++|.+-.|.+.+.... .+...++.+..+..
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s-~i~~~G~~~lt~~a 125 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS-LISLLGLFGLTLSA 125 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34455677777778889999999987655555555555566777899999999876632221110 11111111111110
Q ss_pred --HHhhc-------c----CchH-HHHHHHHHHHhhhhhhh----cchhhhhhc----cCCC-ch--HHHHHHHhHhHhh
Q 021674 208 --TQLSH-------V----DSPA-MAVLCMACSQGTDAFSQ----SGLYSNHQD----IAPR-YS--GVLLGLSNTAGVL 262 (309)
Q Consensus 208 --~~~~~-------~----~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~-~~--g~a~~~~~~~~~l 262 (309)
..... . ..+. .....+..+....+.+. +.+.+-..| ..|+ .+ ..-........++
T Consensus 126 ~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~ 205 (571)
T KOG1237|consen 126 MIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNG 205 (571)
T ss_pred HhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHH
Confidence 00000 0 0010 11111111111111111 111111111 1232 22 2334444555677
Q ss_pred hhhHHHhHHHhhcccCCchHHHHHHHHHHHHHHHHHHh
Q 021674 263 AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 300 (309)
Q Consensus 263 gg~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (309)
|..++..+.-++=|+.+|...|.+..++.+++.+++..
T Consensus 206 g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 206 GALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 88888888888878888999888887777777666543
No 275
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=82.55 E-value=42 Score=32.04 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=29.6
Q ss_pred cCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 244 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 244 ~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
.+|..-|+-+.+.|+..|+||---..++=+++|.
T Consensus 434 SDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 434 SDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred cCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 4688999999999999999998888887777774
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=82.40 E-value=1.6 Score=34.66 Aligned_cols=50 Identities=16% Similarity=0.284 Sum_probs=42.9
Q ss_pred CCcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHH
Q 021674 1 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 50 (309)
Q Consensus 1 ~Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l 50 (309)
.|+|++..|.+.-.++.+..++++|+|..++.-+....+.++|..+.-.+
T Consensus 99 ~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 99 LGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999998888888887777665443
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.29 E-value=37 Score=31.88 Aligned_cols=261 Identities=9% Similarity=-0.016 Sum_probs=0.0
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCC-------cchhHhhhhHHHHHHHHH
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW-------PSVFYSFGSLGTVWFTVW 74 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gW-------r~~F~i~~~~~~v~~~~~ 74 (309)
|++.|......+.+.+ .+|++ .++.+.+|.+++++++..+--......+= -..|+..+.+-.+..+..
T Consensus 117 g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~ 191 (437)
T TIGR00939 117 NSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVC 191 (437)
T ss_pred Hhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHH
Q ss_pred HhhcccCCCCCCCCCHHH-----------HHHHHhc-------------------------cCCCCCCCCCChhHhhcch
Q 021674 75 LSKAHSSPAEDPQLRPAE-----------KKLIVSS-------------------------CASKEPVKTIPWGLILSKP 118 (309)
Q Consensus 75 ~~~~~~~p~~~~~~~~~~-----------~~~~~~~-------------------------~~~~~~~~~~~~~~l~~~~ 118 (309)
+...++.|..+.-.++.+ +....++ ..+++...+.+.++++ +
T Consensus 192 ~~~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--k 269 (437)
T TIGR00939 192 YLLLPKLPFARYYLQKKLDKGAGEDETKGELRSKAEQNGIPHGGDQPSPTLVLDWEKEPESPDEPQKPLKTSVWVVF--T 269 (437)
T ss_pred HHHHhcCHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccCCccchhcccCcHHHHH--H
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcCCC--hhhHHHHHH
Q 021674 119 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS--VTTVRKIMQ 196 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~~~--~~~~~~~~~ 196 (309)
+.|...+..++.+...+.++.-.-...+...+..... .+.........+|=.+|-.+.++.-.++.+ ........-
T Consensus 270 ki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~--~~~~i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R 347 (437)
T TIGR00939 270 KVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNW--FYPIICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLR 347 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCcc--HHHHHHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHH
Q ss_pred HHhhHHHHHHHHH------hhccCchHHHHHHHHHHHhhhhhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhH
Q 021674 197 SIGFLGPAFFLTQ------LSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA 270 (309)
Q Consensus 197 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~ 270 (309)
.+..-...++... ....++....+.....+..-+.+....+.......+++++-.+..+++..-.+|-.+|..+
T Consensus 348 ~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 348 VLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred H
Q 021674 271 T 271 (309)
Q Consensus 271 ~ 271 (309)
.
T Consensus 428 ~ 428 (437)
T TIGR00939 428 S 428 (437)
T ss_pred H
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=75.78 E-value=69 Score=29.81 Aligned_cols=46 Identities=13% Similarity=0.052 Sum_probs=28.2
Q ss_pred HhHHHHHHHH-hCCCccchhhHhhhhH-HHHHHHHHHHHHHHHHHHHc
Q 021674 139 TWMPTYYNQV-LHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 139 ~wlp~~l~~~-~g~s~~~~g~~~~~~~-~~~~ig~~~~G~l~dr~~~r 184 (309)
.++.+|+.+. +|++..|..--..+.. =...+..+....++|.++-|
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk 71 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK 71 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4666788766 8888776543322222 13344556677899998755
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=75.74 E-value=0.83 Score=44.00 Aligned_cols=48 Identities=8% Similarity=-0.074 Sum_probs=0.0
Q ss_pred HHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674 135 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 182 (309)
Q Consensus 135 ~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~ 182 (309)
.++..=.-+-++++++++.+++|.+.+..-++..+..++..+..+|.-
T Consensus 19 ~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~h 66 (539)
T PF03137_consen 19 SGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGH 66 (539)
T ss_dssp ------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 333333334678899999999999999999999999999999998853
No 280
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=67.07 E-value=81 Score=31.68 Aligned_cols=49 Identities=8% Similarity=-0.032 Sum_probs=37.9
Q ss_pred HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
+++.=.=+-+++.++++..++|++..-.-++..+.-....|...|.-|.
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP 162 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP 162 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc
Confidence 4444444557888999999999999988888888888888888886433
No 281
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=55.54 E-value=1.8e+02 Score=27.17 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHH-----HHHHcCCCh
Q 021674 118 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD-----TLVSKGLSV 188 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~d-----r~~~r~~~~ 188 (309)
++...+.+.+..... -+++..-+|.+|+ ..|.|-++.+.+.....=-. =.++-.-+.| |+|||+-++
T Consensus 31 ~~illLl~LYllQGi-P~GL~~~iP~lL~-ak~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGI-PLGLIGAIPLLLQ-AKGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhHHHHHHHHHHcCC-chhHhhhhHHHhc-CCCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhcccccee
Confidence 344555555665543 3567777888887 56888777766543322111 1234445566 899876443
No 282
>PRK03612 spermidine synthase; Provisional
Probab=52.04 E-value=24 Score=33.88 Aligned_cols=65 Identities=28% Similarity=0.375 Sum_probs=41.5
Q ss_pred cccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHH-HhhhcCCcchhHhhhhHHHHH
Q 021674 5 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF-LIHRFGWPSVFYSFGSLGTVW 70 (309)
Q Consensus 5 ~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~-l~~~~gWr~~F~i~~~~~~v~ 70 (309)
.|+..|....+..+.. .++-++..|-++....+|+++|..+.++ +.+.+|=+...++.+.+.++.
T Consensus 124 ~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~ 189 (521)
T PRK03612 124 IGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLA 189 (521)
T ss_pred HHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 4556666666554422 2345778899999999999999888766 455777444444445554443
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=49.88 E-value=4.9 Score=35.63 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=0.0
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhh
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 46 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l 46 (309)
|.+.|......+.+.+ .+|++ .+.-+..|.++++++...+
T Consensus 8 ~~~~~~~q~s~~glas-~~p~~----y~~a~~~Gq~~aGv~~s~l 47 (309)
T PF01733_consen 8 GFANAVLQSSLFGLAS-LFPPK----YTQAVMIGQGLAGVIVSLL 47 (309)
T ss_dssp ---------------------------------------------
T ss_pred HhhhHHHhccHHHHHh-cCCHH----HHHHHHhhccHHHHHHHHH
Confidence 4445555555655555 57864 5666677777777776544
No 284
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=47.22 E-value=2.4e+02 Score=26.22 Aligned_cols=68 Identities=19% Similarity=0.171 Sum_probs=30.4
Q ss_pred hhhhcchhhhhhccCCCchHHHHHHHhHhHhhhhhHHHhHHHhhccc--CCchHHHHHHHHHHHHHHHHHH
Q 021674 231 AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAVWN 299 (309)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~ 299 (309)
+..+++++-...+.+++.....++-.|..|.+-+.+ -.+.-...+. .+-..-|.++..+.++|.+.+.
T Consensus 132 a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~-~i~tka~~~~~~~sA~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 132 AVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLL-RILTKAAFSDSRTSALIYFITSTVILLLCFVLYL 201 (406)
T ss_pred hhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHH-HHHHHHhcCCCCceeehhHHHHHHHHHHHHHHHH
Confidence 344556666556677776654443333333222211 1222222222 2222334445555556665555
No 285
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.60 E-value=86 Score=23.07 Aligned_cols=31 Identities=16% Similarity=0.387 Sum_probs=23.4
Q ss_pred CchHHHHHHHhHhHhhhhhHHHhHHHhhccc
Q 021674 247 RYSGVLLGLSNTAGVLAGVFGTAATGYILQH 277 (309)
Q Consensus 247 ~~~g~a~~~~~~~~~lgg~i~~~~~g~l~~~ 277 (309)
+..+.+.++--..-.++|.+-.+.+|+++|+
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666665566677888888899999998
No 286
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.55 E-value=27 Score=33.38 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=26.4
Q ss_pred HhCC-CccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674 148 VLHF-NLTESGLFCVLPWLTMAFSANLGGWIADTLV 182 (309)
Q Consensus 148 ~~g~-s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~ 182 (309)
-+|+ ||..=|.++....+..++.+..+|+.+.|+-
T Consensus 352 ~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 352 CLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred HhccCCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 3455 7777777777777777888889999998864
No 287
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=43.00 E-value=56 Score=20.10 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=16.2
Q ss_pred HHhhhhHHHHhhhcCC----cchhHhhhhHHHHHH
Q 021674 41 VTGLAFSPFLIHRFGW----PSVFYSFGSLGTVWF 71 (309)
Q Consensus 41 ~lg~~l~~~l~~~~gW----r~~F~i~~~~~~v~~ 71 (309)
++|..+++++.+.+++ .+.=++.++++.+.+
T Consensus 5 iiGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiil 39 (48)
T PF04226_consen 5 IIGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIIL 39 (48)
T ss_pred hHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 3455556666555544 444445566665543
No 288
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.42 E-value=1.2e+02 Score=22.43 Aligned_cols=22 Identities=14% Similarity=0.350 Sum_probs=15.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 021674 162 LPWLTMAFSANLGGWIADTLVS 183 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~ 183 (309)
.-.+.+.+.....||+.||+..
T Consensus 50 sefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 50 SEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 3445566666688999999853
No 289
>COG1288 Predicted membrane protein [Function unknown]
Probab=40.05 E-value=3.3e+02 Score=25.70 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=17.9
Q ss_pred cCCcchhHhhhhHHHHHHHHH-HhhcccCCCC
Q 021674 54 FGWPSVFYSFGSLGTVWFTVW-LSKAHSSPAE 84 (309)
Q Consensus 54 ~gWr~~F~i~~~~~~v~~~~~-~~~~~~~p~~ 84 (309)
.+||...++...+.-++...+ .++.+++|+.
T Consensus 216 ~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~~ 247 (481)
T COG1288 216 MGLRIVVWVVFTLISIIYVYWYASKVKKDPTL 247 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 489999998665544433333 3344555543
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=39.62 E-value=47 Score=32.36 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=54.9
Q ss_pred CcccccchhhHHHHHhccCC---Ccc-hh--HHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhhHHHH
Q 021674 2 GIGEGVAMPAMNNILSKWVP---VAE-RS--RSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 69 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p---~~~-rg--~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~~~~v 69 (309)
.+|.|+.-|...+.=+|=|+ +++ +. ....++....++|..++..+..++=++.||..-|-+..+.-++
T Consensus 163 a~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~l 236 (571)
T KOG1237|consen 163 ALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNAL 236 (571)
T ss_pred eeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHH
Confidence 46888999999999999998 322 23 6788899999999999998888777789999999986665444
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=38.79 E-value=13 Score=32.56 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=0.0
Q ss_pred HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674 144 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 144 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~ 185 (309)
|+-+.+|+...+.|.+.+...-...+.+.+.|-+.||.|||+
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKr 103 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKR 103 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhcccc
No 292
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=37.82 E-value=29 Score=25.41 Aligned_cols=30 Identities=23% Similarity=0.162 Sum_probs=19.1
Q ss_pred hhhcCCcchhHhhhhHHHHHHHHHHhhccc
Q 021674 51 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 80 (309)
Q Consensus 51 ~~~~gWr~~F~i~~~~~~v~~~~~~~~~~~ 80 (309)
-+..+|+.+|++.-.++++++.+++...||
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD 83 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPD 83 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 356799999998555565555454444443
No 293
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=35.65 E-value=1.8e+02 Score=21.41 Aligned_cols=18 Identities=17% Similarity=0.543 Sum_probs=12.6
Q ss_pred HHHHHHHHHhHHHHHHHH
Q 021674 131 NWGTFILLTWMPTYYNQV 148 (309)
Q Consensus 131 ~~~~~~~~~wlp~~l~~~ 148 (309)
.+++-....|+.+++.+.
T Consensus 62 AFGYGll~v~~tP~l~~~ 79 (106)
T PF11872_consen 62 AFGYGLLIVWLTPLLARQ 79 (106)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555678998998754
No 294
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=32.69 E-value=1.5e+02 Score=19.65 Aligned_cols=41 Identities=17% Similarity=0.133 Sum_probs=34.4
Q ss_pred HHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 144 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 144 ~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
.+.-..|.+..+++.+.....+...+=+.+.-++-||+.+|
T Consensus 24 ~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 24 LIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33445788899999998888889999999999999999765
No 295
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=32.54 E-value=2.1e+02 Score=23.28 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=17.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 160 CVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 160 ~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
..+..+...+++.+++++..|.-||
T Consensus 158 ~~~~~~~~~v~a~lG~~lG~kllkK 182 (186)
T PF09605_consen 158 LIIIIIITFVGALLGALLGKKLLKK 182 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344456777888888888887765
No 296
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=31.97 E-value=78 Score=26.84 Aligned_cols=47 Identities=36% Similarity=0.473 Sum_probs=36.1
Q ss_pred CcccccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHH
Q 021674 2 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 49 (309)
Q Consensus 2 Gig~g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~ 49 (309)
|+|.|.++.++..-+.+.+| +......++-.+++-+.+..|..++-+
T Consensus 182 GvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 182 GVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred CCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888999999888888886 667778888877777777666655443
No 297
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=31.80 E-value=65 Score=18.12 Aligned_cols=20 Identities=15% Similarity=0.476 Sum_probs=13.1
Q ss_pred hhhHHHHHHHHHHHHHHHHH
Q 021674 161 VLPWLTMAFSANLGGWIADT 180 (309)
Q Consensus 161 ~~~~~~~~ig~~~~G~l~dr 180 (309)
..+.+++.+.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 34556777777777777654
No 298
>PF12832 MFS_1_like: MFS_1 like family
Probab=31.57 E-value=1e+02 Score=20.89 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=30.9
Q ss_pred hHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHh
Q 021674 26 SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 62 (309)
Q Consensus 26 g~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i 62 (309)
..-.|++.+...+-..+++++.+.++|.++-|-....
T Consensus 34 ~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 34 PSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 4667778888888889999999999999988877765
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=31.29 E-value=4.4e+02 Score=24.62 Aligned_cols=64 Identities=11% Similarity=0.073 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHcC
Q 021674 122 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 185 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r~ 185 (309)
.+...++...++-=.-.+=...|+.+..|-|..-+...-.+......+-.++.|...|+..|.+
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~K 94 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVK 94 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHH
Confidence 3455555555553222233445666655655555555555555555555667788889887654
No 300
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.21 E-value=4.8e+02 Score=24.75 Aligned_cols=56 Identities=11% Similarity=-0.075 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHhCCCc----cchhhH-hhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 129 CHNWGTFILLTWMPTYYNQVLHFNL----TESGLF-CVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 129 ~~~~~~~~~~~wlp~~l~~~~g~s~----~~~g~~-~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
+...++..-.+-..+.+...+.-++ ..+|+. +.+......+..++++.+.|+.+.|
T Consensus 20 ~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K 80 (461)
T KOG3098|consen 20 FLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPK 80 (461)
T ss_pred HHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHH
Confidence 3334444455556666666555543 346666 6777889999999999999999875
No 301
>PRK11588 hypothetical protein; Provisional
Probab=30.19 E-value=5.1e+02 Score=24.96 Aligned_cols=11 Identities=18% Similarity=0.132 Sum_probs=7.5
Q ss_pred cCCcchhHhhh
Q 021674 54 FGWPSVFYSFG 64 (309)
Q Consensus 54 ~gWr~~F~i~~ 64 (309)
.+||.+.++..
T Consensus 229 ~~~R~i~~~v~ 239 (506)
T PRK11588 229 SGLRIVMWVIF 239 (506)
T ss_pred HHHHHHHHHHH
Confidence 36888877644
No 302
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=29.52 E-value=4.7e+02 Score=24.37 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=22.4
Q ss_pred HhHHHHHHHHhCCCccc---hhhHhhh-hHHHHHHHHHHHHHHHHH
Q 021674 139 TWMPTYYNQVLHFNLTE---SGLFCVL-PWLTMAFSANLGGWIADT 180 (309)
Q Consensus 139 ~wlp~~l~~~~g~s~~~---~g~~~~~-~~~~~~ig~~~~G~l~dr 180 (309)
+-.|.+..+.++-...+ .-+.... .++.-.+|.++..++-++
T Consensus 264 siFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~ 309 (406)
T KOG1479|consen 264 SIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP 309 (406)
T ss_pred EecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC
Confidence 35677777665443322 2222233 456666776666665554
No 303
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=28.95 E-value=3.2e+02 Score=22.27 Aligned_cols=23 Identities=22% Similarity=0.225 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHc
Q 021674 162 LPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 162 ~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
...+...+++.+++++..|.-||
T Consensus 163 ~~~~~t~v~~~iG~~iG~kllkK 185 (189)
T TIGR02185 163 IMIVLTAVAGIAGVLIGKKLLKK 185 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677778888888887765
No 304
>TIGR03716 R_switched_YkoY integral membrane protein, YkoY family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.
Probab=26.52 E-value=2.7e+02 Score=23.32 Aligned_cols=48 Identities=21% Similarity=0.310 Sum_probs=26.1
Q ss_pred ccchhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhh
Q 021674 6 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 53 (309)
Q Consensus 6 g~~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~ 53 (309)
++......+++.+..|++||.|+.-+=..+..+==++--..+.++.+.
T Consensus 8 S~DN~~via~~~~~LP~~~r~~al~~Gi~gAivlR~i~i~~~~~Ll~~ 55 (215)
T TIGR03716 8 SADNALVLAVMVKHLPEKQRKKALFYGLIGAYVFRFIALFLASFLIKF 55 (215)
T ss_pred HhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677888889988877665332222111112223455666664
No 305
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=24.71 E-value=1.2e+02 Score=21.59 Aligned_cols=22 Identities=18% Similarity=0.332 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHc
Q 021674 163 PWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 163 ~~~~~~ig~~~~G~l~dr~~~r 184 (309)
..+...+.+.+.|.+.||..||
T Consensus 84 ~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 84 TFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 3456667788999999998654
No 306
>TIGR03717 R_switched_YjbE integral membrane protein, YjbE family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family commonly are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains protein YjbE from Bacillus subtilis. A transport function is proposed.
Probab=23.93 E-value=3.8e+02 Score=21.60 Aligned_cols=45 Identities=11% Similarity=0.182 Sum_probs=25.1
Q ss_pred chhhHHHHHhccCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhh
Q 021674 8 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 52 (309)
Q Consensus 8 ~~p~~~~~i~~~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~ 52 (309)
......++.++-.|++||-|+.-.-..+..+=-.+-...+.++.+
T Consensus 15 DN~~vi~~~t~~lp~~~r~~~~~~G~~~A~vlr~if~~~G~~ll~ 59 (176)
T TIGR03717 15 DNAVVIALAARNLPAHQRKKAIFWGTAGAIVLRILLTAVAVYLLA 59 (176)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456678888898887665443333322222333455666666
No 307
>TIGR03718 R_switched_Alx integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.
Probab=23.79 E-value=2.5e+02 Score=24.97 Aligned_cols=52 Identities=27% Similarity=0.385 Sum_probs=25.1
Q ss_pred HHHHHhc--cCCCcchhHHHHHHHhhhhhHHHHhhhhHHHHhhhcCCcchhHhhhh
Q 021674 12 MNNILSK--WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 65 (309)
Q Consensus 12 ~~~~i~~--~~p~~~rg~~~g~~~~~~~~g~~lg~~l~~~l~~~~gWr~~F~i~~~ 65 (309)
...++.+ -.|+++|-|+.=+=..+.-+==.+--..+.++.+.+.| ++++.|.
T Consensus 82 V~~~if~~f~vP~~~q~rvL~~Gi~gAlvlR~i~i~~g~~Li~~f~w--i~~ifG~ 135 (302)
T TIGR03718 82 VFLLIFSYFAVPREYQHRVLFWGILGALVLRAIFIALGAALIEQFHW--VLYIFGA 135 (302)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHH
Confidence 3444433 45877776654321111111112223456677776555 7776554
No 308
>PRK04949 putative sulfate transport protein CysZ; Validated
Probab=23.05 E-value=4.8e+02 Score=22.43 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021674 164 WLTMAFSANLGGWIADTLVS 183 (309)
Q Consensus 164 ~~~~~ig~~~~G~l~dr~~~ 183 (309)
.++..+++++-|.++||..+
T Consensus 92 ~v~~~IaaPF~~~lAE~VE~ 111 (251)
T PRK04949 92 TLANFIAAPFNGLLAEKVEA 111 (251)
T ss_pred HHHHHHHHHHhHHHHHHHHH
Confidence 46778888999999999976
No 309
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=21.91 E-value=5.2e+02 Score=22.30 Aligned_cols=16 Identities=6% Similarity=-0.226 Sum_probs=10.5
Q ss_pred HHHHHHhHHHHHHHHh
Q 021674 134 TFILLTWMPTYYNQVL 149 (309)
Q Consensus 134 ~~~~~~wlp~~l~~~~ 149 (309)
.|+..+.=..|+++..
T Consensus 194 lyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 194 LYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHhcccchHHHHHhCc
Confidence 5677666667777653
No 310
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.46 E-value=58 Score=24.75 Aligned_cols=11 Identities=9% Similarity=0.135 Sum_probs=6.7
Q ss_pred cchhHhhhhHH
Q 021674 57 PSVFYSFGSLG 67 (309)
Q Consensus 57 r~~F~i~~~~~ 67 (309)
||+++++.++.
T Consensus 1 RW~l~~iii~~ 11 (130)
T PF12273_consen 1 RWVLFAIIIVA 11 (130)
T ss_pred CeeeHHHHHHH
Confidence 78887644443
No 311
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=21.10 E-value=2.3e+02 Score=25.67 Aligned_cols=44 Identities=18% Similarity=0.074 Sum_probs=26.6
Q ss_pred HHHHHHhhhhhHHHHhhhhHHHHhh--hcCCcchhHhhhhHHHHHH
Q 021674 28 SLALVYSGMYLGSVTGLAFSPFLIH--RFGWPSVFYSFGSLGTVWF 71 (309)
Q Consensus 28 ~~g~~~~~~~~g~~lg~~l~~~l~~--~~gWr~~F~i~~~~~~v~~ 71 (309)
.++-|++|-+.++++|..-=..+.+ .++=|....+.-.+.++.+
T Consensus 147 ~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa 192 (409)
T KOG3880|consen 147 VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFA 192 (409)
T ss_pred eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHH
Confidence 5667777877777777654444444 2455666666555555443
No 312
>PRK02237 hypothetical protein; Provisional
Probab=20.63 E-value=2.5e+02 Score=20.71 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=29.9
Q ss_pred HHHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHH
Q 021674 136 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 182 (309)
Q Consensus 136 ~~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~ 182 (309)
..+-|+|+ +|+. .+.|-.....+-...+.+++-+|..|+..
T Consensus 44 ~lfg~llT-l~p~-----~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~ 84 (109)
T PRK02237 44 ALFGWLLT-LQPD-----AAFGRVYAAYGGVYVAGSLLWLWVVDGVR 84 (109)
T ss_pred HHHHHHHh-cCCc-----hhhhhHHHHhhhHHHHHHHHHHHHhcCcC
Confidence 34457777 4431 34777777777788888999999999874
No 313
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=20.28 E-value=94 Score=27.26 Aligned_cols=48 Identities=15% Similarity=0.248 Sum_probs=36.5
Q ss_pred HHHhHHHHHHHHhCCCccchhhHhhhhHHHHHHHHHHHH---------HHHHHHHHcC
Q 021674 137 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG---------WIADTLVSKG 185 (309)
Q Consensus 137 ~~~wlp~~l~~~~g~s~~~~g~~~~~~~~~~~ig~~~~G---------~l~dr~~~r~ 185 (309)
-++++-.|+.+. |.++.+..+++....++-.+.+++.| +-.||+|||.
T Consensus 36 WFTYlllfltqi-glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 36 WFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred HHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhccee
Confidence 345555677664 99999888888888899999988886 4457888764
No 314
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=20.07 E-value=4.8e+02 Score=21.18 Aligned_cols=36 Identities=17% Similarity=0.024 Sum_probs=28.8
Q ss_pred hCCCccchhhHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 021674 149 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 184 (309)
Q Consensus 149 ~g~s~~~~g~~~~~~~~~~~ig~~~~G~l~dr~~~r 184 (309)
..-|+.+..+.+..++++........+.+.++..+|
T Consensus 145 ~s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 145 ASGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred HcCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 345678888888899999888888888888887654
Done!