Query 021676
Match_columns 309
No_of_seqs 168 out of 236
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 07:39:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021676.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021676hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 61.5 1.7 0.00013 31.3 1.9 30 147-176 31-60 (67)
2 d1sknp_ a.37.1.1 (P:) Skn-1 {C 47.2 5.8 0.00042 29.0 2.7 20 126-145 49-68 (74)
3 d2pw6a1 c.56.6.1 (A:14-271) Un 42.0 5.4 0.00039 34.1 2.2 87 157-254 138-241 (258)
4 d1uz3a1 a.283.1.1 (A:13-102) E 33.1 51 0.0037 24.4 6.3 29 203-233 34-62 (90)
5 d1urfa_ a.2.6.1 (A:) Protein k 29.5 18 0.0013 26.2 3.0 28 146-173 46-74 (81)
6 d1wa8a1 a.25.3.1 (A:1-99) ESAT 22.5 1.1E+02 0.0081 20.8 9.4 68 123-216 6-76 (99)
7 d1q4ga1 a.93.1.2 (A:74-584) Pr 20.1 51 0.0037 30.3 5.0 50 191-241 223-278 (511)
8 d2uubp1 d.27.1.1 (P:1-83) Ribo 18.2 35 0.0026 24.6 2.7 29 261-289 52-81 (83)
9 d1kija1 d.14.1.3 (A:221-392) D 17.3 34 0.0025 27.2 2.6 11 131-141 159-169 (172)
10 d1a0pa2 d.163.1.1 (A:111-292) 17.0 13 0.00095 27.1 -0.1 17 265-281 30-46 (182)
No 1
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.46 E-value=1.7 Score=31.33 Aligned_cols=30 Identities=30% Similarity=0.513 Sum_probs=24.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHhhcceeec
Q 021676 147 YVQQLESSRLKLTQLEQELQRARQQGIFIS 176 (309)
Q Consensus 147 YvQqLEssr~kL~qleqelqrarqQg~~~~ 176 (309)
--|+||.++..|..|||||.+-|=.-||+.
T Consensus 31 iE~eLerCk~~irrLeqel~~ErF~~iYLQ 60 (67)
T d1k1fa_ 31 IEQELERAKASIRRLEQEVNQERFRMIYLQ 60 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347899999999999999998776666654
No 2
>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}
Probab=47.25 E-value=5.8 Score=29.04 Aligned_cols=20 Identities=40% Similarity=0.617 Sum_probs=17.6
Q ss_pred HHHHHHHhHHHHHHhhhhHH
Q 021676 126 TLRRLAQNREAARKSRLRKK 145 (309)
Q Consensus 126 ~lRRLAQNREAARKSRlRKK 145 (309)
-.||=..|+-||+.+|-||-
T Consensus 49 DIRRRGKNKvAAqnCRKRKl 68 (74)
T d1sknp_ 49 KIRRRGKNKVAARTCRQRRT 68 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccHHHHHHHHHhhh
Confidence 35999999999999999974
No 3
>d2pw6a1 c.56.6.1 (A:14-271) Uncharacterized protein YgiD {Escherichia coli [TaxId: 562]}
Probab=42.00 E-value=5.4 Score=34.11 Aligned_cols=87 Identities=14% Similarity=0.281 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhhcceeeccCCCCCCCCCC------chhhhHHHHHHHHHHHH--------hhhHHHHHHHh---hcCC
Q 021676 157 KLTQLEQELQRARQQGIFISSSGDQSHSMSG------NGAAAFDVEYSRWLEEH--------NRHIVELRAAV---NSHA 219 (309)
Q Consensus 157 kL~qleqelqrarqQg~~~~~~~~~~~~~~~------~Ga~aF~~eY~rWleEq--------~r~i~ELRaAL---~ah~ 219 (309)
.+-+|-|.|+.+|.+|+.|.+||+-+|.... .+......+|..|+.+. ...+.+++.+- .+|.
T Consensus 138 ~~~~lG~aL~~lr~e~vliIgSG~lsHnL~~~~~~~~~~~~~~a~~Fd~w~~~~l~~~~~~~~~~l~~~~~~p~a~~ahP 217 (258)
T d2pw6a1 138 WHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNP 217 (258)
T ss_dssp HHHHHHHHHGGGGGGTEEEEEEECSSCCTTSCCSSSCCCCCHHHHHHHHHHHTTTTCCSCGGGCTTTSGGGSTTHHHHCS
T ss_pred HHHHHHHHHHHHHHCCEEEEEecccccccccccccCCCCCCcHHHHHHHHHHHHHhcCCchhhHHHHHHHhChhHhhcCC
Confidence 4445667777888999988778888875321 22334456778898742 11122233221 2343
Q ss_pred CChhHHHHHHHHHHhHHHHHHHHhhhhcccchhhc
Q 021676 220 GDTELRTIVDNVTSHFDEIFRLKGIASKADVFHIL 254 (309)
Q Consensus 220 ~D~eLr~LVdkvmsHY~eyfrlKs~AAkaDVfhv~ 254 (309)
+++ ||.-+|-.-.++.+.+...++
T Consensus 218 t~E-----------H~~Pl~~alGa~~~~~~~~~~ 241 (258)
T d2pw6a1 218 TPE-----------HYLPLLYVLGAWDGQEPITIP 241 (258)
T ss_dssp SST-----------TTHHHHHHHHTCCSSSCEECS
T ss_pred chh-----------HHHHHHHHhhCCCCCCCeEEE
Confidence 333 777777777766655544443
No 4
>d1uz3a1 a.283.1.1 (A:13-102) Emsy {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.15 E-value=51 Score=24.43 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=20.7
Q ss_pred HHhhhHHHHHHHhhcCCCChhHHHHHHHHHH
Q 021676 203 EHNRHIVELRAAVNSHAGDTELRTIVDNVTS 233 (309)
Q Consensus 203 Eq~r~i~ELRaAL~ah~~D~eLr~LVdkvms 233 (309)
+....+.+||..| +++|++.+..+.++.+
T Consensus 34 eke~lLt~LR~~L--~IS~eeHr~elrr~~~ 62 (90)
T d1uz3a1 34 EKKDLLGELSKVL--SISTERHRAEVRRAVN 62 (90)
T ss_dssp HHHHHHHHHHHHT--TCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh--CCCcHHHHHHHHHhcc
Confidence 5677788888877 4567777777776654
No 5
>d1urfa_ a.2.6.1 (A:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.52 E-value=18 Score=26.20 Aligned_cols=28 Identities=29% Similarity=0.330 Sum_probs=23.1
Q ss_pred HHH-HHHHHhHHHHHHHHHHHHHHhhcce
Q 021676 146 AYV-QQLESSRLKLTQLEQELQRARQQGI 173 (309)
Q Consensus 146 AYv-QqLEssr~kL~qleqelqrarqQg~ 173 (309)
+.+ +.|..|..||..|.++|++.+|.+.
T Consensus 46 ~eaq~~l~eS~~Ki~lLr~~L~~~~q~~~ 74 (81)
T d1urfa_ 46 LTAQQMLQDSKTKIDIIRMQLRRALQADQ 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444 4588999999999999999998753
No 6
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.48 E-value=1.1e+02 Score=20.80 Aligned_cols=68 Identities=24% Similarity=0.339 Sum_probs=42.1
Q ss_pred cHHHHHHHHHhHHHHHHhhhhHHHHHHHHHHhHHHHHHHHHHHHHHhhcceeeccCCCCCCCCCCchhhhHHHHHHHHHH
Q 021676 123 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGAAAFDVEYSRWLE 202 (309)
Q Consensus 123 d~k~lRRLAQNREAARKSRlRKKAYvQqLEssr~kL~qleqelqrarqQg~~~~~~~~~~~~~~~~Ga~aF~~eY~rWle 202 (309)
||-.|++.|.+=+ ...+.|+. .|..|++.+..-. +-+- |....+|...|.+|-.
T Consensus 6 d~~~l~~~A~~~~----------~~~~~l~~---~l~~l~~~v~~l~--~~W~-----------G~A~~af~~~~~~w~~ 59 (99)
T d1wa8a1 6 DAATLAQEAGNFE----------RISGDLKT---QIDQVESTAGSLQ--GQWR-----------GAAGTAAQAAVVRFQE 59 (99)
T ss_dssp CHHHHHHHHHHHH----------HHHHHHHH---HHHHHHHHHHHHH--TSCC-----------SSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH----------HHHHHHHH---HHHHHHHHHHHHH--HHhh-----------hhHHHHHHHHHHHHHH
Confidence 7888998887432 23334444 5556666654432 2232 3578999999999986
Q ss_pred HHhhh---HHHHHHHhh
Q 021676 203 EHNRH---IVELRAAVN 216 (309)
Q Consensus 203 Eq~r~---i~ELRaAL~ 216 (309)
...+. |.++...|.
T Consensus 60 ~~~~l~~~L~~i~~~L~ 76 (99)
T d1wa8a1 60 AANKQKQELDEISTNIR 76 (99)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 65554 555556664
No 7
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]}
Probab=20.08 E-value=51 Score=30.33 Aligned_cols=50 Identities=30% Similarity=0.383 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHHHhhcCCCChhH----HHHHHHHHHh--HHHHHHH
Q 021676 191 AAFDVEYSRWLEEHNRHIVELRAAVNSHAGDTEL----RTIVDNVTSH--FDEIFRL 241 (309)
Q Consensus 191 ~aF~~eY~rWleEq~r~i~ELRaAL~ah~~D~eL----r~LVdkvmsH--Y~eyfrl 241 (309)
...-+...-|+.|||+...+|++ ++.+.+|++| |.+|-..+.| |.||...
T Consensus 223 pgL~~lhtlflREHNriad~L~~-~nP~W~DE~LFQ~AR~Ivia~~q~I~~~EyLp~ 278 (511)
T d1q4ga1 223 PGLMLYATIWLREHNRVCDLLKA-EHPTWGDEQLFQTARLILIGETIKIVIEEYVQQ 278 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhHHhHHHHHHHhccHHHHHHHh-hCCCCCHHHHHHHHHHHHHHHeeeeeHHhhHHH
Confidence 34446788999999999999865 4888888754 6777777765 7787754
No 8
>d2uubp1 d.27.1.1 (P:1-83) Ribosomal protein S16 {Thermus thermophilus [TaxId: 274]}
Probab=18.19 E-value=35 Score=24.62 Aligned_cols=29 Identities=14% Similarity=0.286 Sum_probs=25.4
Q ss_pred hHHHHHHHhc-CCCchhHHHHHHHhhcccc
Q 021676 261 PAERCFMWIG-GFRSSELLKVSRLLIAIVP 289 (309)
Q Consensus 261 PlER~FLWIG-GFRPSeLlkLL~sL~Giq~ 289 (309)
-.||.-.||+ |-.||+-.+-|....|+-+
T Consensus 52 ~~eRi~~Wl~~GAqpS~tV~~ll~~~gi~~ 81 (83)
T d2uubp1 52 DVERARYWLSVGAQPTDTARRLLRQAGVFR 81 (83)
T ss_dssp CHHHHHHHHHHTCEECHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHcCCCc
Confidence 3789999998 9999999999999988754
No 9
>d1kija1 d.14.1.3 (A:221-392) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
Probab=17.27 E-value=34 Score=27.25 Aligned_cols=11 Identities=82% Similarity=0.957 Sum_probs=7.1
Q ss_pred HHhHHHHHHhh
Q 021676 131 AQNREAARKSR 141 (309)
Q Consensus 131 AQNREAARKSR 141 (309)
||-|+||||.|
T Consensus 159 ~~aR~~arkar 169 (172)
T d1kija1 159 AQAREAARKAR 169 (172)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 46677777654
No 10
>d1a0pa2 d.163.1.1 (A:111-292) Recombinase XerD {Escherichia coli [TaxId: 562]}
Probab=17.02 E-value=13 Score=27.11 Aligned_cols=17 Identities=29% Similarity=0.554 Sum_probs=13.6
Q ss_pred HHHHhcCCCchhHHHHH
Q 021676 265 CFMWIGGFRSSELLKVS 281 (309)
Q Consensus 265 ~FLWIGGFRPSeLlkLL 281 (309)
+|+|..|+||+|+..|-
T Consensus 30 ~l~~~tG~R~~ei~~L~ 46 (182)
T d1a0pa2 30 EVLYATGLRVSELVGLT 46 (182)
T ss_dssp HHHHHHCCCHHHHTTCB
T ss_pred HHHHHhCCccCCcccch
Confidence 35788999999998663
Done!