Query 021680
Match_columns 309
No_of_seqs 121 out of 1522
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 04:51:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021680.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021680hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 1.1E-48 2.4E-53 362.0 34.9 293 1-293 182-476 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 5E-47 1.1E-51 348.9 35.0 292 1-295 132-425 (437)
3 COG1473 AbgB Metal-dependent a 100.0 8.4E-46 1.8E-50 331.0 33.8 289 1-292 99-390 (392)
4 PRK08588 succinyl-diaminopimel 100.0 9.3E-41 2E-45 304.1 28.1 271 2-291 94-376 (377)
5 TIGR01891 amidohydrolases amid 100.0 5.2E-39 1.1E-43 291.0 32.4 274 1-276 86-360 (363)
6 PRK13013 succinyl-diaminopimel 100.0 1.2E-39 2.7E-44 301.4 28.6 274 2-293 120-424 (427)
7 PRK06915 acetylornithine deace 100.0 6.6E-39 1.4E-43 296.0 27.4 273 2-294 128-421 (422)
8 PRK07338 hypothetical protein; 100.0 2.1E-38 4.6E-43 290.9 29.0 267 3-292 127-399 (402)
9 TIGR01910 DapE-ArgE acetylorni 100.0 5.7E-39 1.2E-43 292.1 21.6 263 4-282 104-375 (375)
10 PRK06133 glutamate carboxypept 100.0 2.2E-37 4.7E-42 284.4 29.7 270 3-293 134-409 (410)
11 PRK13983 diaminopimelate amino 100.0 6.9E-38 1.5E-42 287.5 25.7 272 3-289 115-399 (400)
12 TIGR01246 dapE_proteo succinyl 100.0 2.4E-37 5.3E-42 281.0 26.4 272 1-290 89-370 (370)
13 PRK13009 succinyl-diaminopimel 100.0 4.7E-37 1E-41 279.6 28.3 271 2-291 93-374 (375)
14 PRK08651 succinyl-diaminopimel 100.0 2E-37 4.3E-42 283.9 24.7 265 4-292 113-392 (394)
15 PRK12891 allantoate amidohydro 100.0 2.5E-36 5.4E-41 277.7 31.7 275 3-293 93-411 (414)
16 PRK08652 acetylornithine deace 100.0 5.6E-37 1.2E-41 276.3 26.4 261 2-292 84-346 (347)
17 TIGR01880 Ac-peptdase-euk N-ac 100.0 1.1E-36 2.3E-41 279.5 27.0 275 4-291 111-398 (400)
18 PRK06837 acetylornithine deace 100.0 1.5E-36 3.2E-41 280.4 27.2 268 4-292 137-423 (427)
19 PRK00466 acetyl-lysine deacety 100.0 1.4E-36 2.9E-41 273.5 25.8 252 3-293 90-345 (346)
20 PRK05111 acetylornithine deace 100.0 1.1E-36 2.3E-41 278.1 25.0 263 3-292 109-382 (383)
21 PRK07473 carboxypeptidase; Pro 100.0 7.9E-36 1.7E-40 270.8 28.3 259 4-290 111-375 (376)
22 PRK08262 hypothetical protein; 100.0 2.1E-36 4.6E-41 283.7 25.3 279 1-292 147-485 (486)
23 PRK09290 allantoate amidohydro 100.0 1.2E-35 2.7E-40 273.2 29.7 273 4-293 91-412 (413)
24 TIGR03320 ygeY M20/DapE family 100.0 4.4E-36 9.5E-41 274.8 25.2 267 4-292 107-395 (395)
25 TIGR01892 AcOrn-deacetyl acety 100.0 4.7E-36 1E-40 272.1 24.8 256 3-286 96-363 (364)
26 PRK12893 allantoate amidohydro 100.0 3.8E-35 8.3E-40 270.1 30.6 273 4-293 94-411 (412)
27 PRK12892 allantoate amidohydro 100.0 2.8E-35 6E-40 271.2 29.0 272 5-292 93-411 (412)
28 PRK09133 hypothetical protein; 100.0 1.4E-35 3E-40 277.3 27.4 272 3-292 139-470 (472)
29 PRK05469 peptidase T; Provisio 100.0 2.3E-35 5.1E-40 271.1 28.4 265 3-293 138-407 (408)
30 TIGR03526 selenium_YgeY putati 100.0 7.2E-36 1.6E-40 273.3 24.8 269 2-292 102-395 (395)
31 PRK13004 peptidase; Reviewed 100.0 7.5E-36 1.6E-40 273.6 24.9 270 4-293 109-398 (399)
32 PRK12890 allantoate amidohydro 100.0 1.5E-34 3.1E-39 266.3 32.4 273 3-292 91-412 (414)
33 PRK08596 acetylornithine deace 100.0 2E-35 4.4E-40 272.3 26.5 271 4-294 117-419 (421)
34 PRK07522 acetylornithine deace 100.0 9.4E-36 2E-40 272.0 23.8 263 3-291 102-384 (385)
35 PRK06446 hypothetical protein; 100.0 2E-35 4.4E-40 273.4 25.4 273 3-291 101-434 (436)
36 TIGR01883 PepT-like peptidase 100.0 2.6E-35 5.7E-40 266.8 25.1 257 4-287 99-360 (361)
37 PRK08737 acetylornithine deace 100.0 3.7E-35 8E-40 265.1 25.9 256 2-289 99-363 (364)
38 PRK13381 peptidase T; Provisio 100.0 8.8E-35 1.9E-39 266.9 28.2 261 4-291 137-403 (404)
39 PRK04443 acetyl-lysine deacety 100.0 1.3E-34 2.9E-39 260.7 24.4 252 3-290 89-348 (348)
40 TIGR01882 peptidase-T peptidas 100.0 1.1E-34 2.3E-39 266.4 24.1 264 2-291 139-407 (410)
41 TIGR01900 dapE-gram_pos succin 100.0 8.6E-34 1.9E-38 257.3 28.0 251 3-272 101-373 (373)
42 PRK08201 hypothetical protein; 100.0 5.3E-34 1.2E-38 265.6 26.5 274 3-291 118-454 (456)
43 TIGR01886 dipeptidase dipeptid 100.0 6E-34 1.3E-38 265.0 25.4 265 3-291 115-465 (466)
44 PRK07906 hypothetical protein; 100.0 7.3E-34 1.6E-38 262.7 25.7 269 3-289 103-425 (426)
45 PRK09104 hypothetical protein; 100.0 1.4E-33 3.1E-38 263.1 27.0 274 3-291 126-462 (464)
46 TIGR01879 hydantase amidase, h 100.0 5.8E-33 1.3E-37 254.5 29.6 270 5-290 86-401 (401)
47 PRK13007 succinyl-diaminopimel 100.0 1.4E-33 3.1E-38 254.6 24.6 251 2-287 89-351 (352)
48 TIGR03176 AllC allantoate amid 100.0 1.3E-32 2.9E-37 251.8 29.8 270 7-292 90-404 (406)
49 PRK07079 hypothetical protein; 100.0 6.8E-33 1.5E-37 258.8 27.6 276 3-293 125-457 (469)
50 TIGR01902 dapE-lys-deAc N-acet 100.0 4.9E-33 1.1E-37 249.4 23.6 251 3-292 80-335 (336)
51 COG0624 ArgE Acetylornithine d 100.0 3.6E-32 7.8E-37 250.2 26.2 278 3-292 114-408 (409)
52 PRK07907 hypothetical protein; 100.0 5.9E-32 1.3E-36 251.3 26.8 272 3-291 122-447 (449)
53 PRK06156 hypothetical protein; 100.0 8.4E-32 1.8E-36 253.7 27.3 271 3-292 152-516 (520)
54 PRK07318 dipeptidase PepV; Rev 100.0 2.4E-32 5.2E-37 254.8 23.1 268 3-292 116-466 (466)
55 PRK13590 putative bifunctional 100.0 2.6E-30 5.6E-35 246.1 32.3 270 5-293 270-589 (591)
56 PRK13799 unknown domain/N-carb 100.0 3E-30 6.5E-35 245.5 31.6 268 8-292 273-590 (591)
57 PRK07205 hypothetical protein; 100.0 6.4E-30 1.4E-34 237.4 26.3 267 3-292 114-443 (444)
58 TIGR01887 dipeptidaselike dipe 100.0 4.5E-30 9.8E-35 237.4 24.0 263 3-287 104-447 (447)
59 TIGR01893 aa-his-dipept aminoa 100.0 3.9E-29 8.5E-34 233.8 25.2 261 4-290 108-476 (477)
60 KOG2275 Aminoacylase ACY1 and 100.0 2.4E-29 5.3E-34 218.9 21.3 274 3-291 127-418 (420)
61 PRK15026 aminoacyl-histidine d 100.0 6.7E-29 1.4E-33 230.9 24.7 256 4-290 114-482 (485)
62 PRK08554 peptidase; Reviewed 100.0 1.3E-27 2.8E-32 220.6 23.5 271 3-291 101-437 (438)
63 KOG2276 Metalloexopeptidases [ 99.9 6.3E-20 1.4E-24 159.0 21.6 275 4-291 131-471 (473)
64 COG2195 PepD Di- and tripeptid 99.9 1.8E-20 3.9E-25 168.2 15.9 262 4-291 143-412 (414)
65 PF07687 M20_dimer: Peptidase 99.8 1.3E-18 2.9E-23 130.6 12.5 103 82-184 3-110 (111)
66 PF01546 Peptidase_M20: Peptid 99.7 8.5E-17 1.8E-21 132.3 9.6 151 1-288 29-188 (189)
67 COG4187 RocB Arginine degradat 98.7 1.3E-07 2.8E-12 84.0 9.8 169 3-178 138-322 (553)
68 TIGR03106 trio_M42_hydro hydro 98.6 6.9E-07 1.5E-11 79.9 12.6 71 205-287 265-339 (343)
69 PRK09961 exoaminopeptidase; Pr 98.5 8.3E-07 1.8E-11 79.6 10.9 76 204-290 254-333 (344)
70 TIGR03107 glu_aminopep glutamy 98.5 1.8E-06 4E-11 77.3 12.9 76 204-290 263-341 (350)
71 COG1363 FrvX Cellulase M and r 98.3 2.1E-05 4.5E-10 70.0 13.7 77 205-292 268-348 (355)
72 PRK09864 putative peptidase; P 98.3 2.2E-05 4.7E-10 70.4 13.2 76 204-290 262-341 (356)
73 PF05343 Peptidase_M42: M42 gl 97.8 0.00066 1.4E-08 59.5 13.9 56 3-63 132-188 (292)
74 PRK10199 alkaline phosphatase 97.7 0.00012 2.6E-09 65.0 7.9 47 3-51 141-188 (346)
75 PF04389 Peptidase_M28: Peptid 96.4 0.0057 1.2E-07 49.5 4.8 45 7-51 28-73 (179)
76 COG2234 Iap Predicted aminopep 91.3 0.4 8.8E-06 44.6 5.6 44 8-53 231-275 (435)
77 PF05450 Nicastrin: Nicastrin; 90.6 0.9 1.9E-05 38.5 6.5 44 8-51 27-74 (234)
78 TIGR01893 aa-his-dipept aminoa 90.5 0.59 1.3E-05 44.1 5.9 45 130-180 335-379 (477)
79 PRK02256 putative aminopeptida 90.5 0.35 7.6E-06 45.2 4.3 73 205-288 381-460 (462)
80 PTZ00371 aspartyl aminopeptida 89.1 1.1 2.3E-05 42.2 6.3 79 204-291 373-456 (465)
81 PRK02813 putative aminopeptida 88.5 0.79 1.7E-05 42.6 5.0 76 204-288 346-426 (428)
82 KOG2195 Transferrin receptor a 80.1 2.5 5.3E-05 41.7 4.4 47 5-51 370-420 (702)
83 KOG2194 Aminopeptidases of the 79.0 2.4 5.3E-05 42.1 4.0 57 8-64 166-224 (834)
84 cd06408 PB1_NoxR The PB1 domai 52.2 80 0.0017 22.1 6.2 54 157-215 14-67 (86)
85 PF03755 YicC_N: YicC-like fam 50.6 92 0.002 24.5 7.2 64 154-219 30-94 (159)
86 cd06406 PB1_P67 A PB1 domain i 50.5 56 0.0012 22.6 5.0 54 152-208 8-61 (80)
87 cd06411 PB1_p51 The PB1 domain 37.6 1E+02 0.0022 21.2 4.6 40 152-193 4-43 (78)
88 PHA02448 hypothetical protein 36.9 1.4E+02 0.0031 22.6 5.7 78 23-113 21-101 (192)
89 PRK06156 hypothetical protein; 34.6 2.5E+02 0.0054 26.9 8.7 24 135-158 241-264 (520)
90 PRK13562 acetolactate synthase 33.6 1.6E+02 0.0035 20.5 5.3 56 115-179 15-70 (84)
91 COG4187 RocB Arginine degradat 31.7 67 0.0015 29.9 4.0 108 166-293 434-548 (553)
92 PF06675 DUF1177: Protein of u 31.6 63 0.0014 27.5 3.5 62 4-65 54-130 (276)
93 cd06407 PB1_NLP A PB1 domain i 30.7 1.5E+02 0.0033 20.4 4.8 59 156-218 11-70 (82)
94 TIGR02159 PA_CoA_Oxy4 phenylac 30.6 2.2E+02 0.0049 22.1 6.3 67 149-224 23-90 (146)
95 PRK02256 putative aminopeptida 28.6 89 0.0019 29.5 4.4 33 7-43 262-294 (462)
96 PRK02813 putative aminopeptida 26.3 71 0.0015 29.8 3.3 19 28-46 252-274 (428)
97 cd04869 ACT_GcvR_2 ACT domains 24.5 2E+02 0.0043 19.1 4.7 38 150-191 42-79 (81)
98 TIGR01887 dipeptidaselike dipe 20.6 1.8E+02 0.0039 27.3 4.9 23 139-161 195-217 (447)
99 TIGR00255 conserved hypothetic 20.6 4.7E+02 0.01 23.0 7.1 64 154-219 31-95 (291)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=1.1e-48 Score=362.03 Aligned_cols=293 Identities=58% Similarity=0.981 Sum_probs=258.7
Q ss_pred CccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccc
Q 021680 1 MHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 80 (309)
Q Consensus 1 ~h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 80 (309)
||+||||+++|++++|+++|++.+.+++++|.|+|++|||.|.|+++++++|.+++.|+++++|+.+.+|++.+..+.+.
T Consensus 182 ~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig~~~~~ 261 (478)
T PLN02280 182 MHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIGSRPGP 261 (478)
T ss_pred EEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCceeEecccc
Confidence 69999999999999999999988778899999999999999889999999999988999999998777888887777777
Q ss_pred cccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 81 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 81 ~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
..+|..+++|+++|+++|++.|+.|+|||..+++++..|+++..+..++....+++++.|+||...|+||++|++.+|+|
T Consensus 262 ~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~l~~diR 341 (478)
T PLN02280 262 LLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFR 341 (478)
T ss_pred cccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEEEEEEEe
Confidence 77899999999999999999999999999999999999998865554555678999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec--cCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHH
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 238 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 238 (309)
+.+..+.+++.++|++++++.+...++++++++.. ...++++.+++++++.+++++.+++|.+.+.......|++|++
T Consensus 342 ~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~ 421 (478)
T PLN02280 342 AFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFS 421 (478)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHH
Confidence 99999999999999999999887788887777532 3457888889999999999988877765432223567899999
Q ss_pred HHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 021680 239 FFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 293 (309)
Q Consensus 239 ~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~~ 293 (309)
+|.+.+|++++++|+.+..||....+|+++|+++++++..++++|+.++.+++.+
T Consensus 422 ~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~ 476 (478)
T PLN02280 422 FYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIE 476 (478)
T ss_pred HHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9998899999989988766666667999999999999999999999999998853
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=5e-47 Score=348.90 Aligned_cols=292 Identities=63% Similarity=1.020 Sum_probs=253.9
Q ss_pred CccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccc
Q 021680 1 MHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 80 (309)
Q Consensus 1 ~h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 80 (309)
||+||||+++|++++|+++|++.+..++++|.|+|++|||.+.|++.++++|.+++.|++++.|..+..+.|.+..+.|.
T Consensus 132 ~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig~h~~p~~~~g~~~~~~g~ 211 (437)
T PLN02693 132 MHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSPRTPFGKAASRAGS 211 (437)
T ss_pred EECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEEEecCCCCCCeeEEeccCc
Confidence 69999999999999999999988777899999999999996579999999998887889999898877788888788788
Q ss_pred cccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 81 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 81 ~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
.++|..+++|+++|+++|++.|+.|.|||..++++|..|+++..+..++..+.+++++.|+||...|+||++|++.+|+|
T Consensus 212 ~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~GG~~~NvVPd~a~~~~diR 291 (437)
T PLN02693 212 FMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLR 291 (437)
T ss_pred ccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEcCCCCceECCeEEEEEEEe
Confidence 88899999999999999999999999999999999999998865555556678999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec--cCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHH
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 238 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 238 (309)
+.+.. +.+.++|+++++..+...++++++++.. .++++++.+++++++.+++++++++|.+++.......|++|++
T Consensus 292 ~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~~~~~~~~gseDf~ 369 (437)
T PLN02693 292 AFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEAFVEAAPEMGSEDFS 369 (437)
T ss_pred cCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcceeecCCCceechHH
Confidence 99974 6899999999998877778887777642 3467778888899999999999988877543234567999999
Q ss_pred HHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhccC
Q 021680 239 FFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLENQ 295 (309)
Q Consensus 239 ~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~~~~ 295 (309)
+|.+.+|.+++++|+.+...+ ....|+++|+++.+.+..++++|+.++.+++...+
T Consensus 370 ~~~~~vP~~~~~lG~~~~~~~-~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~~~ 425 (437)
T PLN02693 370 YFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHATMAVQYLKEKA 425 (437)
T ss_pred HHHHHhhhhEEEEecCCCCCC-CCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999998853211 13599999999999999999999999999987543
No 3
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=8.4e-46 Score=330.96 Aligned_cols=289 Identities=45% Similarity=0.741 Sum_probs=263.9
Q ss_pred CccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCccHHHHHHcCCCCC-cceeEEecCCCCCCCceEEeccc
Q 021680 1 MHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALEN-VEAIFGLHVSSLFPVGTVASRPG 79 (309)
Q Consensus 1 ~h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~g 79 (309)
|||||||+|++++|+++++|++...+++|+|.|+|+++||.++|++.|+++|.|++ +|+++.+|+.+..|.|.+..++|
T Consensus 99 mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~~~g~v~~~~G 178 (392)
T COG1473 99 MHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGLPVGTVALRPG 178 (392)
T ss_pred cccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCCCCceEEeecc
Confidence 89999999999999999999988778999999999999999888999999999999 99999999988669999999999
Q ss_pred ccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEE
Q 021680 80 PTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF 159 (309)
Q Consensus 80 ~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~di 159 (309)
....+...|+++++|+++|++.|+.++||+..++.++..|+.+..|..++.++.+++++.++||.+.|+||+++++..++
T Consensus 179 ~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVIpd~A~l~gtv 258 (392)
T COG1473 179 ALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVIPDSAELEGTI 258 (392)
T ss_pred cceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcCCCeeEEEEEe
Confidence 77778889999999999999999999999999999999999998888888888999999999999999999999999999
Q ss_pred ecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccc--cCCCCCCCchH
Q 021680 160 RAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIK--ENRPLMGTEDF 237 (309)
Q Consensus 160 R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~g~tD~ 237 (309)
|.......+.+.++|+++++.++..+++++++.+ ...+|++.+|+.+.+.+++++++..|...+. ....+.||.|+
T Consensus 259 R~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~--~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsEDf 336 (392)
T COG1473 259 RTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY--ERGYPPVVNDPALTDLLAEAAEEVGGEEVVVVELPPSMAGSEDF 336 (392)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe--cCCCCCccCCHHHHHHHHHHHHHhccccceecccCCCCCccchH
Confidence 9999999999999999999999999999999999 6889999999999999999999987744321 22345699999
Q ss_pred HHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 238 SFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 238 ~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
++|.+.+|..++++|......+ ....|.|...++.+.+..+++++..++..++.
T Consensus 337 ~~~~~~~Pg~~~~lG~~~~~~~-~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~ 390 (392)
T COG1473 337 GYYLEKVPGAFFFLGTGSADGG-TYPLHHPKFDFDEAALATGVKLLAALALLYLA 390 (392)
T ss_pred HHHHHhCCeeEEEeecCcCCCC-cccccCCcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998764321 23489999999999999999999999988874
No 4
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=9.3e-41 Score=304.12 Aligned_cols=271 Identities=18% Similarity=0.197 Sum_probs=223.6
Q ss_pred ccch---hhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEec
Q 021680 2 HACG---HDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASR 77 (309)
Q Consensus 2 h~~g---~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 77 (309)
|+|| |||+++++|.|+++|++.+..++++|.|+|++|||.| .|+++++++++++++|++++.++ ++.. +.
T Consensus 94 ~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~ep-----~~~~-i~ 167 (377)
T PRK08588 94 YGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGEP-----SGHG-IV 167 (377)
T ss_pred EecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEecC-----CCce-eE
Confidence 5655 5999999999999999988888999999999999987 59999999988888898887543 2221 11
Q ss_pred ccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---CCCCCCeeEEEEEEecCCcCceecCeEE
Q 021680 78 PGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---ADPLDSQVLTVAKFEGGGAFNIIPDSVT 154 (309)
Q Consensus 78 ~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~---~~~~~~~t~~i~~i~gg~~~n~vP~~~~ 154 (309)
..++|..+++|+++|+++|++.|+.|.|||..+++++.+|+++..+. .+..+..+++++.|+||...|+||++|+
T Consensus 168 --~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvip~~~~ 245 (377)
T PRK08588 168 --YAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIINGGEQVNSVPDEAE 245 (377)
T ss_pred --EEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEeCCCcCCcCCCeEE
Confidence 23568999999999999999999999999999999999998875332 2234568999999999999999999999
Q ss_pred EEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccc--cCHHHHHHHHHHHHHhcCccccccCCCCC
Q 021680 155 IGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLM 232 (309)
Q Consensus 155 ~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (309)
+.+|+|+.|.++.+++.++|++++++.....+.++++++. ..+++.. .++++++.+++++++++|.++ .....+
T Consensus 246 ~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~l~~~~~~~~~~~~g~~~--~~~~~~ 321 (377)
T PRK08588 246 LEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIY--SNHRPVASDKDSKLVQLAKDVAKSYVGQDI--PLSAIP 321 (377)
T ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEe--cCCCCcCCCCCCHHHHHHHHHHHHhhCCCC--ceecCC
Confidence 9999999999999999999999999876555566777653 3344443 357899999999999888765 346788
Q ss_pred CCchHHHHhhh---cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 233 GTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 233 g~tD~~~~~~~---~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
|++|+++|... +|++. +||++. ..+|++||+++++++.+++++|..++.+++
T Consensus 322 g~tD~~~~~~~~~~ip~i~--~Gpg~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 376 (377)
T PRK08588 322 GATDASSFLKKKPDFPVII--FGPGNN-----LTAHQVDEYVEKDMYLKFIDIYKEIIIQYL 376 (377)
T ss_pred CcccHHHHhhhcCCCCEEE--ECCCCC-----ccCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 99999999853 56554 677632 249999999999999999999999999886
No 5
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=5.2e-39 Score=291.02 Aligned_cols=274 Identities=42% Similarity=0.751 Sum_probs=230.3
Q ss_pred CccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccc
Q 021680 1 MHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 80 (309)
Q Consensus 1 ~h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 80 (309)
+|+||+|+++|++++|+..|++.+..++++|.|+|++|||.+.|++++++++.+++.|+++++++.+.++.+.+.+..+.
T Consensus 86 l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~~~~~ 165 (363)
T TIGR01891 86 MHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGLRPGT 165 (363)
T ss_pred eecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEECCCc
Confidence 48999999999999999999887777889999999999999889999998888888899999998777777776666677
Q ss_pred cccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 81 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 81 ~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
.++|..+++|+++|+++|++.|+.|.||+..|+++|.+|+++..+..+...+.++|++.|+||...|+||++|++.+|+|
T Consensus 166 ~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~~diR 245 (363)
T TIGR01891 166 IMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMSGTVR 245 (363)
T ss_pred ceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEEEEEE
Confidence 78899999999999999998899999999999999999988643322233357899999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccc-cCCCCCCCchHHH
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIK-ENRPLMGTEDFSF 239 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~g~tD~~~ 239 (309)
+.|..+.+++.+.|++++++.+...+.++++++. ..+|+...++++++.+++++++++|..+.. .+..++|++|+++
T Consensus 246 ~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~~--~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~gg~Da~~ 323 (363)
T TIGR01891 246 SLDPEVRDQIIDRIERIVEGAAAMYGAKVELNYD--RGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMGSEDFAY 323 (363)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe--cCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCccccCHHH
Confidence 9999999999999999999987777888887764 345555568899999999999987854321 2346889999999
Q ss_pred HhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCch
Q 021680 240 FAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDAL 276 (309)
Q Consensus 240 ~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~ 276 (309)
+.+.+|++++|+|....+.++....|++++-.+.+-+
T Consensus 324 ~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 324 YSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred HHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 9988999999888875432223359999988876544
No 6
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.2e-39 Score=301.41 Aligned_cols=274 Identities=16% Similarity=0.151 Sum_probs=219.5
Q ss_pred ccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc--cHHHHHHcCCCC--CcceeEEecCCCCCCCceEEec
Q 021680 2 HACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG--GAKKMLDAGALE--NVEAIFGLHVSSLFPVGTVASR 77 (309)
Q Consensus 2 h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~~~ 77 (309)
++|||||+++++|+|+++|++.+..++++|.|+|++|||+|+ |..++.+++.++ ..|++++.+ |++...+.
T Consensus 120 Ga~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~d~~i~~e-----p~~~~~i~ 194 (427)
T PRK13013 120 GACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGVAYLAEQGRFSPDRVQHVIIPE-----PLNKDRIC 194 (427)
T ss_pred cccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHHHHHHhcCCccccCCCEEEEec-----CCCCCceE
Confidence 489999999999999999999888889999999999999873 788888888776 568888754 33321112
Q ss_pred ccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----c-C------CCCCCeeEEEEEEecCCcC
Q 021680 78 PGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR----E-A------DPLDSQVLTVAKFEGGGAF 146 (309)
Q Consensus 78 ~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~----~-~------~~~~~~t~~i~~i~gg~~~ 146 (309)
..++|..+++|+++|+++|++.|+.|.|||..++++|.+|+++..+ . . +....+++|++.|+||...
T Consensus 195 --~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~ 272 (427)
T PRK13013 195 --LGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPE 272 (427)
T ss_pred --EeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCcc
Confidence 2356999999999999999999999999999999999999765311 0 0 1123578999999999766
Q ss_pred ----------ceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHh-CCeeEEEEeccCCCCccc--cCHHHHHHHH
Q 021680 147 ----------NIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ-RCNATVTFDDKSFYPVTV--NNKNLHEHFQ 213 (309)
Q Consensus 147 ----------n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~--~~~~~~~~~~ 213 (309)
|+||++|++.+|+|+.|.++.++++++|++.+++.+... +.+++++. ...+++.. .++++++.++
T Consensus 273 ~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~lv~~l~ 350 (427)
T PRK13013 273 QDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRARPGFAYEIRD--LFEVLPTMTDRDAPVVRSVA 350 (427)
T ss_pred ccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCceeEEEE--cccCCcccCCCCCHHHHHHH
Confidence 999999999999999999999999999999998876432 44445443 22344443 3568999999
Q ss_pred HHHHHhcCccccccCCCCCCCchHHHHhhh--c-CeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021680 214 KVAADMLGVQNIKENRPLMGTEDFSFFAEA--I-PGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 290 (309)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~-p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~ 290 (309)
+++++.+|.++ ....++|++|++++.+. + |++ .+||+.. ..+|++|||++++++.+++++|++++.++
T Consensus 351 ~a~~~~~g~~~--~~~~~~g~~D~~~~~~~g~~~~~v--~fGPg~~-----~~aH~~nE~v~i~~l~~~~~~l~~~l~~~ 421 (427)
T PRK13013 351 AAIERVLGRQA--DYVVSPGTYDQKHIDRIGKLKNCI--AYGPGIL-----DLAHQPDEWVGIADMVDSAKVMALVLADL 421 (427)
T ss_pred HHHHHhhCCCC--ceeecCccCCHHHHHhcCCCCCEE--EECCCCc-----cccCCCCceeEHHHHHHHHHHHHHHHHHH
Confidence 99999888776 33567889999999875 3 344 4677643 24999999999999999999999999999
Q ss_pred Hhc
Q 021680 291 LLE 293 (309)
Q Consensus 291 ~~~ 293 (309)
|+.
T Consensus 422 ~~~ 424 (427)
T PRK13013 422 LAG 424 (427)
T ss_pred hcc
Confidence 864
No 7
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=6.6e-39 Score=295.99 Aligned_cols=273 Identities=20% Similarity=0.215 Sum_probs=219.3
Q ss_pred ccchh---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEec
Q 021680 2 HACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASR 77 (309)
Q Consensus 2 h~~g~---~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 77 (309)
|+||+ ||+++++|.|+++|++.+..++++|.|+|++|||+|+ |+..++..++ ..|++++. +|++...
T Consensus 128 yGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~-----ep~~~~i-- 198 (422)
T PRK06915 128 YGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSVIEEESGGAGTLAAILRGY--KADGAIIP-----EPTNMKF-- 198 (422)
T ss_pred EecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEecccccCCcchHHHHhcCc--CCCEEEEC-----CCCCccc--
Confidence 56554 7999999999999999888889999999999999874 8888887764 56888873 4555321
Q ss_pred ccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----cCCCC-----CCeeEEEEEEecCCcCce
Q 021680 78 PGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR----EADPL-----DSQVLTVAKFEGGGAFNI 148 (309)
Q Consensus 78 ~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~----~~~~~-----~~~t~~i~~i~gg~~~n~ 148 (309)
...++|..+++|+++|+++|++.|+.|.|||..+++++..|+++... ...+. .+.++|++.|+||...|+
T Consensus 199 -~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nv 277 (422)
T PRK06915 199 -FPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSS 277 (422)
T ss_pred -eeecccEEEEEEEEEeeccccCCCCcCcCHHHHHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCc
Confidence 23467999999999999999999999999999999999999887532 11111 245899999999999999
Q ss_pred ecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHh----CCeeEEEEec--cCCCCccccCHHHHHHHHHHHHHhcCc
Q 021680 149 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ----RCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGV 222 (309)
Q Consensus 149 vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~ 222 (309)
||+.|++.+|+|+.|.++.+++.++|++.+++.+... +..+++++.. ..++ +.+.++++++.+++++++++|.
T Consensus 278 vP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~d~~lv~~l~~a~~~~~G~ 356 (422)
T PRK06915 278 VPDSVILEGRCGIAPNETIEAAKEEFENWIAELNDVDEWFVEHPVEVEWFGARWVPG-ELEENHPLMTTLEHNFVEIEGN 356 (422)
T ss_pred cCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHhccChhhhcCCceEEeecccCCcc-cCCCCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999998765431 2234554421 1122 3456789999999999998888
Q ss_pred cccccCCCCCCCchHHHHhhh--cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhcc
Q 021680 223 QNIKENRPLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLEN 294 (309)
Q Consensus 223 ~~~~~~~~~~g~tD~~~~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~~~ 294 (309)
++. ....+|++|+++|.+. +|++. +||+.. ..+|++||+++++++.+++++|++++.++|+.+
T Consensus 357 ~~~--~~~~~g~tD~~~~~~~~giP~v~--fGpg~~-----~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 357 KPI--IEASPWGTDGGLLTQIAGVPTIV--FGPGET-----KVAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred CCe--eceeeeeccHHHHhccCCCCEEE--ECCCCc-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 763 3667889999999974 99865 466542 249999999999999999999999999998643
No 8
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=290.90 Aligned_cols=267 Identities=23% Similarity=0.251 Sum_probs=216.2
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
+|||||+++++|+|+++|++.+.+++++|.|+|++|||.|+ |++.+++++. .+.++++++++. .+.+.+. ..
T Consensus 127 ~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~-~~~~~~i~~ep~--~~~~~v~----~~ 199 (402)
T PRK07338 127 VADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASAPLLAELA-RGKHAALTYEPA--LPDGTLA----GA 199 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhHHHHHHHh-ccCcEEEEecCC--CCCCcEE----ee
Confidence 48999999999999999998887888999999999999985 8888887654 346777776553 2223332 22
Q ss_pred ccceeEEEEEEEcCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 82 LAAGGFFEAVINGKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
++|..+++|+++|+++|++. |+.|.|||..+++++..|+++... ....++|++.|+||...|+||++|++.+|+|
T Consensus 200 ~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R 275 (402)
T PRK07338 200 RKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIR 275 (402)
T ss_pred cceeEEEEEEEEeEcccCCCCcccCccHHHHHHHHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEec
Confidence 46889999999999999997 899999999999999999887432 1246899999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccc---cCHHHHHHHHHHHHHhcCccccccCCCCCCCchH
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTV---NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDF 237 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 237 (309)
+.|.++.+++.++|++++++.+...+++++++. ...+++.. .++++++.++++.++ +|.++ ....++|++|+
T Consensus 276 ~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~l~~~~~~~~~~-~g~~~--~~~~~~g~tDa 350 (402)
T PRK07338 276 PPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHG--GFGRPPKPIDAAQQRLFEAVQACGAA-LGLTI--DWKDSGGVCDG 350 (402)
T ss_pred cCCHHHHHHHHHHHHHHHhccccCCCeEEEEEc--cccCCCCCCCcchHHHHHHHHHHHHH-cCCCc--ccccCCccchH
Confidence 999999999999999999876544455555432 22234332 345789999988777 48765 44678899999
Q ss_pred HHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 238 SFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 238 ~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
+++... +|++. ++||++.. +|++|||++++++.+++++|+.++.+|+.
T Consensus 351 ~~~~~~giP~v~-~~Gpg~~~------~H~~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 351 NNLAAAGLPVVD-TLGVRGGN------IHSEDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred HHHhhcCCCeEe-ccCCCCCC------CCCccceEehhhHHHHHHHHHHHHHHHhc
Confidence 999875 89874 46776433 89999999999999999999999999874
No 9
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=5.7e-39 Score=292.11 Aligned_cols=263 Identities=21% Similarity=0.218 Sum_probs=213.2
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTL 82 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 82 (309)
||+|++++++|+|+++|++.+..++++|.|+|+++||.| .|++.+++++.+++.|++++.++.. ...+. ..+
T Consensus 104 ~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~i~~~~~~---~~~v~----~~~ 176 (375)
T TIGR01910 104 TDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGVLIPEPSG---GDNIV----IGH 176 (375)
T ss_pred cccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEEEECCCCC---CCceE----EEe
Confidence 567999999999999999988789999999999999988 4999999988776688888754321 12222 235
Q ss_pred cceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC------CCCCCeeEEEEEEecCCcCceecCeEEEE
Q 021680 83 AAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA------DPLDSQVLTVAKFEGGGAFNIIPDSVTIG 156 (309)
Q Consensus 83 ~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~------~~~~~~t~~i~~i~gg~~~n~vP~~~~~~ 156 (309)
+|..+++|+++|+++|++.|+.|.|||..++++|.+|+++..... .....++++++.|+||...|+||++|++.
T Consensus 177 ~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~~~~~ 256 (375)
T TIGR01910 177 KGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPITFNPGVIKGGDWVNSVPDYCEFS 256 (375)
T ss_pred cceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCccccceeEECCCCcCcCCCEEEEE
Confidence 699999999999999999999999999999999999988753211 12346799999999999999999999999
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec-cCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCc
Q 021680 157 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTE 235 (309)
Q Consensus 157 ~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~t 235 (309)
+|+|+.|.++.++++++|++++++.+...+++++++... .++....+.++++++.+++++++.+|.++. ...+.|++
T Consensus 257 ~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~g~t 334 (375)
T TIGR01910 257 IDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVKWSGPNETPPDSRLVKALEAIIKKVRGIEPE--VLVSTGGT 334 (375)
T ss_pred EEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeeeecCCcCCCCCCHHHHHHHHHHHHHhCCCCe--Eeeeccch
Confidence 999999999999999999999988765555555554321 121224556788999999999998888763 36788999
Q ss_pred hHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 021680 236 DFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 282 (309)
Q Consensus 236 D~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i 282 (309)
|++++.+. +|++. +||+.. ..+|++|||++++++.+++++
T Consensus 335 D~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 335 DARFLRKAGIPSIV--YGPGDL-----ETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred hHHHHHHcCCcEEE--ECCCCc-----cccCCCCceeEHHHHHHHhhC
Confidence 99999975 99875 576532 249999999999999998874
No 10
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.2e-37 Score=284.39 Aligned_cols=270 Identities=19% Similarity=0.236 Sum_probs=216.4
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
+||||++++++|+|++.|++.+.+++++|.|+|++|||.| .|++.++++.. .+.|++++.++.. +.+.+.. .
T Consensus 134 ~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~-~~~d~~i~~ep~~--~~~~v~~----~ 206 (410)
T PRK06133 134 IADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELIAELA-AQHDVVFSCEPGR--AKDALTL----A 206 (410)
T ss_pred cccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHHHHHh-ccCCEEEEeCCCC--CCCCEEE----e
Confidence 3789999999999999999888788899999999999987 48999887643 3678999876543 2233332 2
Q ss_pred ccceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 82 LAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
++|..+++|+++|+++|++ .|+.|.|||..++++|..|+++... ....+++++.|+||...|+||++|++.+|+|
T Consensus 207 ~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~~----~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR 282 (410)
T PRK06133 207 TSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGDP----AKGTTLNWTVAKAGTNRNVIPASASAQADVR 282 (410)
T ss_pred ccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccCC----CCCeEEEeeEEECCCCCceeCCccEEEEEEE
Confidence 4689999999999999986 5999999999999999999876321 2346899999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCcccc---CHHHHHHHHHHHHHhcCccccccCCCCCCCchH
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN---NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDF 237 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 237 (309)
+.|.++.+++.++|++++++ ....++++++++ ...++++.. ++++++.+++++++. |.++.......+|++|+
T Consensus 283 ~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa 358 (410)
T PRK06133 283 YLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRF--ERGRPPLEANAASRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDA 358 (410)
T ss_pred ECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEe--ccccCCcccCcchHHHHHHHHHHHHHc-CCCccccccCCCCCchH
Confidence 99999999999999999986 223355566654 234555543 446777777777764 65532112567899999
Q ss_pred HHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 021680 238 SFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 293 (309)
Q Consensus 238 ~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~~ 293 (309)
+++... +|.+++++|+.+.+ +|++|||++++++.+++++|.+++.++|.+
T Consensus 359 ~~~~~~gip~v~~g~G~~~~~------aH~~nE~i~i~~~~~~~~~~~~~~~~~~~~ 409 (410)
T PRK06133 359 AFAAGSGKAAVLEGFGLVGFG------AHSNDEYIELNSIVPRLYLLTRMIMELSRD 409 (410)
T ss_pred HHHHhcCCCceEecccCCCCC------CCCCCcEEEcccHHHHHHHHHHHHHHhhcC
Confidence 999975 88888767775433 999999999999999999999999999865
No 11
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-38 Score=287.50 Aligned_cols=272 Identities=18% Similarity=0.187 Sum_probs=218.4
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc--cHHHHHHc--CCCCCcceeEEecCCCCCCCceEEecc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG--GAKKMLDA--GALENVEAIFGLHVSSLFPVGTVASRP 78 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~ 78 (309)
+||+|++++++|.|+++|++.+..++++|.|+|++|||.|+ |++++++. +.+.+.|++++.+ .++|++....
T Consensus 115 ~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~~~~~~~~~~d~~i~~~--~~~~~~~~i~-- 190 (400)
T PRK13983 115 SEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLKKHPELFKKDDLILVPD--AGNPDGSFIE-- 190 (400)
T ss_pred ccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHhhcccccCCCCEEEEec--CCCCCCceeE--
Confidence 36689999999999999999888899999999999999874 89999876 6566678777633 3456665322
Q ss_pred cccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHH-hhcccC---CCC--CCeeEEEEEEecC-CcCceecC
Q 021680 79 GPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQH-LVSREA---DPL--DSQVLTVAKFEGG-GAFNIIPD 151 (309)
Q Consensus 79 g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~-~~~~~~---~~~--~~~t~~i~~i~gg-~~~n~vP~ 151 (309)
..++|..+++|+++|+++|++.|+.|.||+..+++++..|++ +..... ... ...+++++.+.+| ...|+||+
T Consensus 191 -~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~ 269 (400)
T PRK13983 191 -IAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFNAKDPLFDPPYSTFEPTKKEANVDNINTIPG 269 (400)
T ss_pred -EeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccceeecCCcCCcccCC
Confidence 235699999999999999999999999999999999999987 422111 111 1346778888877 68999999
Q ss_pred eEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec-cCCCCccccCHHHHHHHHHHHHHhcCccccccCCC
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRP 230 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 230 (309)
+|++.+|+|++|+++.++++++|++++++.+...+.+++++... ..+..+.+.++++++.+.+++++++|.++. ...
T Consensus 270 ~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~ 347 (400)
T PRK13983 270 RDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQREQAPPPTPPDSEIVKKLKRAIKEVRGIEPK--VGG 347 (400)
T ss_pred eeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeeccCCccCCCCCcHHHHHHHHHHHHhcCCCce--eee
Confidence 99999999999999999999999999998765556666666532 122334566888999999999998898764 366
Q ss_pred CCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 021680 231 LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 289 (309)
Q Consensus 231 ~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~ 289 (309)
++|++|++++... +|++.+ ||++. .+|++|||++++++.+++++|.+++.+
T Consensus 348 ~~g~td~~~~~~~gip~v~~--Gp~~~------~~H~~nE~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 348 IGGGTVAAFLRKKGYPAVVW--STLDE------TAHQPNEYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred ecCcHHHHHHHHcCCCEEEe--CCccc------cCCCCCceeeHHHHHHHHHHHHHHHhc
Confidence 7889999999764 898765 66543 399999999999999999999998764
No 12
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=2.4e-37 Score=280.96 Aligned_cols=272 Identities=22% Similarity=0.203 Sum_probs=213.6
Q ss_pred Cccc---hhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC--ccHHHHHHcCC--CCCcceeEEecCCCCCCCce
Q 021680 1 MHAC---GHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAKKMLDAGA--LENVEAIFGLHVSSLFPVGT 73 (309)
Q Consensus 1 ~h~~---g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~ 73 (309)
+|+| |+||++++++.|++.+++.+..++++|.|+|++|||.+ .|++.+.+... ...+|++++.+++...+.+.
T Consensus 89 ~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep~~~~~~~~ 168 (370)
T TIGR01246 89 LYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEPSSVKKLGD 168 (370)
T ss_pred EEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCCCCcccCCc
Confidence 3677 45899999999999998888788999999999999986 48888765321 12478888876543322222
Q ss_pred EEecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCeeEEEEEEecCC-cCceecC
Q 021680 74 VASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFEGGG-AFNIIPD 151 (309)
Q Consensus 74 ~~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~i~~i~gg~-~~n~vP~ 151 (309)
. + ...++|..+++++++|+++|++.|+.|.||+..++++|..|++..... .+.+.+.+++++.|+||. ..|+||+
T Consensus 169 ~-i--~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~~~~nvvP~ 245 (370)
T TIGR01246 169 V-I--KNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGTGANNVIPG 245 (370)
T ss_pred e-E--EEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCCCCCcccCC
Confidence 1 1 223468999999999999999999999999999999999998763221 222446799999999995 6899999
Q ss_pred eEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCC
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPL 231 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 231 (309)
+|++.+|+|++|.++.+++.+.|+++++. .+.++++++.. ...|...+++++++.+++++++.+|.++ ....+
T Consensus 246 ~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~~-~~~p~~~~~~~~~~~~~~a~~~~~g~~~--~~~~~ 318 (370)
T TIGR01246 246 ELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWSL-SGEPFLTNDGKLIDKAREAIEETNGIKP--ELSTG 318 (370)
T ss_pred ceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEec-CCcceeCCCCHHHHHHHHHHHHHhCCCC--ceecC
Confidence 99999999999999999999999998864 35666766531 2222233377899999999999889776 34677
Q ss_pred CCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021680 232 MGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 290 (309)
Q Consensus 232 ~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~ 290 (309)
+|++|++++... +|++. +||+... +|++||+++++++.+++++|..++.+|
T Consensus 319 ~g~~d~~~~~~~g~p~~~--~Gp~~~~------~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 319 GGTSDGRFIALMGAEVVE--FGPVNAT------IHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCchHHHHHHcCCCEEE--ecCCccc------CCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 889999999875 88765 5776543 999999999999999999999998764
No 13
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.7e-37 Score=279.63 Aligned_cols=271 Identities=20% Similarity=0.199 Sum_probs=214.9
Q ss_pred ccc---hhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC--ccHHHHHHcCC--CCCcceeEEecCCCCCCCceE
Q 021680 2 HAC---GHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAKKMLDAGA--LENVEAIFGLHVSSLFPVGTV 74 (309)
Q Consensus 2 h~~---g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~ 74 (309)
|+| |+||++++++.|+++|++.+..++++|.|+|++|||.+ .|++.+++... ...+|++++.++....+.+..
T Consensus 93 yGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep~~~~~~~~~ 172 (375)
T PRK13009 93 YGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVGEPTSTERLGDV 172 (375)
T ss_pred EecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEcCCCcccCCCCe
Confidence 566 55999999999999999888888999999999999986 38888765321 124788887665432222211
Q ss_pred EecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-CCCCCeeEEEEEEecCC-cCceecCe
Q 021680 75 ASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-DPLDSQVLTVAKFEGGG-AFNIIPDS 152 (309)
Q Consensus 75 ~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~-~~~~~~t~~i~~i~gg~-~~n~vP~~ 152 (309)
+. ..++|..+++|+++|+++|++.|+.|.||+..++++|.+|+.+..+.. ..+.+.+++++.|++|. ..|+||++
T Consensus 173 -i~--~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~G~~~~nvip~~ 249 (375)
T PRK13009 173 -IK--NGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDAGTGATNVIPGE 249 (375)
T ss_pred -EE--EecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEecCCCCCcccCCc
Confidence 11 234588999999999999999999999999999999999987642221 23445789999999885 78999999
Q ss_pred EEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccc-cCHHHHHHHHHHHHHhcCccccccCCCC
Q 021680 153 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTV-NNKNLHEHFQKVAADMLGVQNIKENRPL 231 (309)
Q Consensus 153 ~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 231 (309)
|++.+|+|++|..+.+++.++|++.++. .+.++++++. ..+++.. +++++++.+++++++.+|.++ .....
T Consensus 250 ~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~--~~~~p~~~~~~~~~~~l~~a~~~~~g~~~--~~~~~ 321 (375)
T PRK13009 250 LEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWT--LSGEPFLTPPGKLVDAVVAAIEAVTGITP--ELSTS 321 (375)
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEe--cCCCcccCCCcHHHHHHHHHHHHHhCCCc--eeecc
Confidence 9999999999999999999999998873 3566666653 2233333 237899999999999889876 34677
Q ss_pred CCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 232 MGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 232 ~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
+|++|++++.+. +|++. +||+.. .+|++|||++++++.+++++|.+++.+|+
T Consensus 322 ~g~tda~~~~~~g~p~v~--~Gp~~~------~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 322 GGTSDARFIADYGAQVVE--FGPVNA------TIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred CCCccHHHHHHcCCCeEE--eccCcc------cCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 889999999875 78765 577653 39999999999999999999999999886
No 14
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2e-37 Score=283.86 Aligned_cols=265 Identities=22% Similarity=0.296 Sum_probs=216.7
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCc--eEEecccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVG--TVASRPGP 80 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~g~ 80 (309)
||||++++++|+|++.|++.+ +++|.|+|++|||+|+ |++++++++.++ .|.+++.+ |++ .+..
T Consensus 113 ~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~~~-~d~~i~~~-----~~~~~~i~~---- 179 (394)
T PRK08651 113 SDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGKVT-PDYVIVGE-----PSGLDNICI---- 179 (394)
T ss_pred cccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccCCC-CCEEEEec-----CCCCCceEE----
Confidence 455999999999999998764 7999999999999985 999999887653 67777654 333 2322
Q ss_pred cccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-------CCCCCeeEEEEE--EecCCcCceecC
Q 021680 81 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-------DPLDSQVLTVAK--FEGGGAFNIIPD 151 (309)
Q Consensus 81 ~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~-------~~~~~~t~~i~~--i~gg~~~n~vP~ 151 (309)
.++|..+++|+++|+++|++.|+.|.|||..|+++|.+|++...+.. ......+++++. |+||...|+||+
T Consensus 180 ~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ig~~~i~gG~~~nviP~ 259 (394)
T PRK08651 180 GHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYEYDDERGAKPTVTLGGPTVEGGTKTNIVPG 259 (394)
T ss_pred ecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhccccccccccCCCceeecceeeeCCCCCCccCC
Confidence 35699999999999999999999999999999999999987532111 112356788888 999999999999
Q ss_pred eEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCC
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENR 229 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~ 229 (309)
+|++.+|+|+.|.++.++++++|+++++..+...++++++++. ..+++. +.++++++.+++++++++|.++. +.
T Consensus 260 ~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~~--~~ 335 (394)
T PRK08651 260 YCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEIT--PFSEAFVTDPDSELVKALREAIREVLGVEPK--KT 335 (394)
T ss_pred EEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEEe--cccCCccCCCCCHHHHHHHHHHHHHhCCCCc--ee
Confidence 9999999999999999999999999999887777777777653 234444 34567999999999998897763 35
Q ss_pred CCCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 230 PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 230 ~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
...|++|+++|.+. +|++.+ ||+.. ..+|++||+++++++.+++++|.+++.++.+
T Consensus 336 ~~~g~tD~~~~~~~gip~v~~--Gpg~~-----~~~H~~~E~i~~~~l~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 336 ISLGGTDARFFGAKGIPTVVY--GPGEL-----ELAHAPDEYVEVKDVEKAAKVYEEVLKRLAK 392 (394)
T ss_pred eecCcccHHHHhhCCCcEEEE--CCCCh-----HhcCCCCceeEHHHHHHHHHHHHHHHHHhhc
Confidence 67899999999986 998654 66542 2499999999999999999999999999864
No 15
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.5e-36 Score=277.69 Aligned_cols=275 Identities=18% Similarity=0.166 Sum_probs=217.1
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc------cHHH------------------------HHHcC
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG------GAKK------------------------MLDAG 52 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~------G~~~------------------------~~~~~ 52 (309)
..|||+|++++|+|+++|++.+..++++|.|++++|||.++ |+.. +.+.|
T Consensus 93 ~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 172 (414)
T PRK12891 93 RYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIG 172 (414)
T ss_pred cccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCC
Confidence 46899999999999999999999999999999999999852 6643 23444
Q ss_pred CCC-------CcceeEEecCCCC---CCCc-eEEecccccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHHHHHHH
Q 021680 53 ALE-------NVEAIFGLHVSSL---FPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASNVIVSL 119 (309)
Q Consensus 53 ~~~-------~~d~~~~~~~~~~---~~~~-~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~-p~-~g~NAi~~~~~~i~~l 119 (309)
+.. +.++.+.+|.+++ ++.+ .+.+ ...++|..|++|+++|+++|++. |+ .|.|||..++++|..|
T Consensus 173 ~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~~~i--v~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l 250 (414)
T PRK12891 173 YAGAEPVGGYPVHAAYELHIEQGAILERAGKTIGV--VTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFL 250 (414)
T ss_pred CCcccccccCCCCEEEEEEeCCCHHHHHCCCcEEE--EeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHH
Confidence 321 2234555555443 1222 1111 23467999999999999999985 86 6899999999999999
Q ss_pred HHhhcccCCCCCCeeEEEEEEecC-CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCC
Q 021680 120 QHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF 198 (309)
Q Consensus 120 ~~~~~~~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~ 198 (309)
+++..+. ..+.++|++.|+|| ...|+||++|++.+|+|+.|.++.++++++|++++++.+...+++++++. ...
T Consensus 251 ~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~--~~~ 325 (414)
T PRK12891 251 DALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQ--IFG 325 (414)
T ss_pred HHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE--Eec
Confidence 8875432 12479999999997 68999999999999999999999999999999999988777777777665 345
Q ss_pred CCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 021680 199 YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 278 (309)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~ 278 (309)
++++..++++++.+++++++ +|.++. ...+.|++|++++...+|+++. +||+.. ..+|++|||++++++.+
T Consensus 326 ~~~~~~d~~lv~~l~~a~~~-~G~~~~--~~~~~ggtDa~~~~~giPt~~~-~gp~~~-----~~aH~~dE~v~i~~l~~ 396 (414)
T PRK12891 326 YAPAPFAPGCIDAVRDAARA-LGLSHM--DIVSGAGHDACFAARGAPTGMI-FVPCVD-----GLSHNEAEAITPEWFAA 396 (414)
T ss_pred CCCcCCCHHHHHHHHHHHHH-cCCCce--ecCCcchHHHHHHHhhCCEEEE-EEcCCC-----CCCCCccccCCHHHHHH
Confidence 66777888999999999876 487653 3577899999988777998554 344432 24899999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 021680 279 GAALHASLATRYLLE 293 (309)
Q Consensus 279 ~~~i~~~~~~~~~~~ 293 (309)
++++|+.++..+.++
T Consensus 397 ~~~il~~~l~~~~~~ 411 (414)
T PRK12891 397 GADVLLRAVLQSAQE 411 (414)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999999754
No 16
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=5.6e-37 Score=276.34 Aligned_cols=261 Identities=16% Similarity=0.141 Sum_probs=208.5
Q ss_pred ccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccc
Q 021680 2 HACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 80 (309)
Q Consensus 2 h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 80 (309)
++|||||+++++++|++.|++. .++++|.|+|++|||.| .|++.++++. ..|++++.+|+. +.+ ..
T Consensus 84 G~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep~~----~~i----~~ 150 (347)
T PRK08652 84 GACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEPTD----LKV----AI 150 (347)
T ss_pred cchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecCCC----Cce----ee
Confidence 5799999999999999999864 34679999999999987 5999888752 347777765431 122 23
Q ss_pred cccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 81 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 81 ~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
.++|..+++|+++|+++|++.|+.|.|||..++++|..|+++......... ++++++.|+||...|+||++|++.+|+|
T Consensus 151 ~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nviP~~~~~~~diR 229 (347)
T PRK08652 151 AHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSIPALCRLRLDAR 229 (347)
T ss_pred ecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCccCCcEEEEEEEE
Confidence 457999999999999999999999999999999999999887533222122 3567788999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHH
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFF 240 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~ 240 (309)
++|.++.+++.++|++++++ .++++++... .+++ ..+.++++++.++++++++ |.++ .+..++|+||+++|
T Consensus 230 ~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~~-~~~~-~~~~~~~lv~~l~~a~~~~-g~~~--~~~~~~g~tDa~~~ 300 (347)
T PRK08652 230 IPPEVEVEDVLDEIDPILDE----YTVKYEYTEI-WDGF-ELDEDEEIVQLLEKAMKEV-GLEP--EFTVMRSWTDAINF 300 (347)
T ss_pred cCCCCCHHHHHHHHHHHHHh----cCceEEEecc-CCcc-cCCCCCHHHHHHHHHHHHh-CCCC--CcCcCCccchhHHH
Confidence 99999999999999998853 3444444321 2322 2456788999999999998 8776 34677889999999
Q ss_pred hhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 241 AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 241 ~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
.+. +|++. +||+.. ..+|++|||++++++.+++++|.+++..++.
T Consensus 301 ~~~gip~v~--~Gpg~~-----~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 301 RYNGTKTVV--WGPGEL-----DLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred HHCCCCEEE--ECCCch-----hhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 875 99875 476542 2499999999999999999999999988873
No 17
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=1.1e-36 Score=279.46 Aligned_cols=275 Identities=17% Similarity=0.172 Sum_probs=212.0
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc--cHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG--GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
||||++++++++|+++|++.+..++++|.|+|++|||.|+ |++.+++++.+...|+.++++....+|++... .+..
T Consensus 111 ~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--i~~~ 188 (400)
T TIGR01880 111 QDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALNLGFALDEGLASPDDVYR--VFYA 188 (400)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCceEEEEcCCCcccccccc--eeEE
Confidence 4558999999999999999888899999999999999873 99999988766667777776543334555322 2345
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhc-------cc--CCCCCCeeEEEEEEecCCcCceecCe
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVS-------RE--ADPLDSQVLTVAKFEGGGAFNIIPDS 152 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~-------~~--~~~~~~~t~~i~~i~gg~~~n~vP~~ 152 (309)
++|..+++|+++|+++|++.|. +.||+..|+++|..|+++.. .. ......+|++++.|+||...|+||++
T Consensus 189 ~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvIP~~ 267 (400)
T TIGR01880 189 ERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIGDVTSVNLTKLKGGVQSNVIPSE 267 (400)
T ss_pred eeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccccccceeecceeccCCcCCcCCCc
Confidence 7799999999999999999864 46999999999998876521 10 11123479999999999999999999
Q ss_pred EEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCC-ccccCHHHHHHHHHHHHHhcCccccccCCCC
Q 021680 153 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYP-VTVNNKNLHEHFQKVAADMLGVQNIKENRPL 231 (309)
Q Consensus 153 ~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 231 (309)
|++.+|+|++|.++.+++.++|++++++. ..++++++.......++ +.+.++++++.+++++++. +.+. .+..+
T Consensus 268 a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-~~~~--~~~~~ 342 (400)
T TIGR01880 268 AEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHSGKPLVTPHDDSNPWWVAFKDAVKEM-GCTF--KPEIL 342 (400)
T ss_pred cEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecCCCCCCCCCCCCCHHHHHHHHHHHHc-CCee--cceee
Confidence 99999999999999999999999999753 12333443321111111 2234678999999999985 6543 23567
Q ss_pred CCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 232 MGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 232 ~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
.|+||++++.+. +|++. +||+..+ ...+|++|||++++++.+++++|.+++.++.
T Consensus 343 ~g~tDa~~~~~~gip~v~--fgp~~~~---~~~aH~~dE~i~i~~l~~~~~~~~~~l~~~~ 398 (400)
T TIGR01880 343 PGSTDSRYIRAAGVPALG--FSPMNNT---PVLLHDHNEFLNEAVFLRGIEIYQTLISALA 398 (400)
T ss_pred cCcchHHHHHhCCCCeEE--ECCccCC---cccccCCCCceEHHHHHHHHHHHHHHHHHhh
Confidence 899999999875 99865 4665322 1248999999999999999999999999886
No 18
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.5e-36 Score=280.40 Aligned_cols=268 Identities=16% Similarity=0.135 Sum_probs=214.4
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTL 82 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 82 (309)
||+||+++++|.|+++|++.+..++++|.|+|++|||.+ .|+..++..++ ..|++++.+ |++... . ..+
T Consensus 137 ~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~e-----p~~~~i-~--~~~ 206 (427)
T PRK06837 137 ADMKAGLAAMLFALDALRAAGLAPAARVHFQSVIEEESTGNGALSTLQRGY--RADACLIPE-----PTGEKL-V--RAQ 206 (427)
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCHhHHHHHhcCc--CCCEEEEcC-----CCCCcc-c--ccc
Confidence 567999999999999999988889999999999999976 58887777765 467887743 443321 1 235
Q ss_pred cceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC----------CCCCCeeEEEEEEecCCcCceecCe
Q 021680 83 AAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA----------DPLDSQVLTVAKFEGGGAFNIIPDS 152 (309)
Q Consensus 83 ~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~----------~~~~~~t~~i~~i~gg~~~n~vP~~ 152 (309)
+|..+++|+++|+++|++.|+.|.||+..++++|..|+++..... ....+.++|++.|+||...|+||+.
T Consensus 207 ~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~ 286 (427)
T PRK06837 207 VGVIWFRLRVRGAPVHVREAGTGANAIDAAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAW 286 (427)
T ss_pred ceeEEEEEEEEeeccccCCcccCcCHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCE
Confidence 699999999999999999999999999999999999987642210 1123568999999999999999999
Q ss_pred EEEEEEEecCChHHHHHHHHHHHHHHHHHHHHh----CCeeEEEEeccCCCCc--cccCHHHHHHHHHHHHHhcCccccc
Q 021680 153 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ----RCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIK 226 (309)
Q Consensus 153 ~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~ 226 (309)
|++.+++|+.|+++.+++.++|++.+++..... +...++++.. ...++ .+.++++++.+++++++.+|.++
T Consensus 287 ~~~~~~ir~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~a~~~~~g~~~-- 363 (427)
T PRK06837 287 CDLDCRIAIYPGVTAADAQAEIEACLAAAARDDRFLSNNPPEVVWSG-FLAEGYVLEPGSEAEAALARAHAAVFGGPL-- 363 (427)
T ss_pred EEEEEEEeECCCCCHHHHHHHHHHHHHHHHhcChhhhhCCCeEEEEe-cccCCcCCCCCCHHHHHHHHHHHHHhCCCC--
Confidence 999999999999999999999999998754332 2234454421 11222 34467899999999999889765
Q ss_pred cCCCCCCCchHHHHhh--hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 227 ENRPLMGTEDFSFFAE--AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 227 ~~~~~~g~tD~~~~~~--~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
.+...+|++|++++.+ .+|++. +||++. .+|++|||++++++.+++++|++++.++|.
T Consensus 364 ~~~~~~g~tDa~~~~~~~gip~v~--~Gp~~~------~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~ 423 (427)
T PRK06837 364 RSFVTTAYTDTRFYGLYYGIPALC--YGPSGE------GIHGFDERVDLESVRKVTKTIALFVAEWCG 423 (427)
T ss_pred eeeEEeeccchHHHhccCCCCEEE--ECCCCC------ccCCCCceEEHHHHHHHHHHHHHHHHHHhC
Confidence 4467789999999985 499775 577653 399999999999999999999999999984
No 19
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=1.4e-36 Score=273.50 Aligned_cols=252 Identities=14% Similarity=0.130 Sum_probs=202.4
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
+|||||+++++++|+++|++.+ .++.|+|++|||+| .|++++++++. ++|++++. +|++...+. ..
T Consensus 90 ~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~-----ep~~~~~i~--~~ 156 (346)
T PRK00466 90 AVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVG-----EPSNGTDIV--VE 156 (346)
T ss_pred ccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEc-----CCCCCCceE--EE
Confidence 5899999999999999998765 35899999999987 49999998763 46887774 444432222 23
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEec
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
++|..+++|+++|+++|++.|+ .|||..|+++|.+|.+... .....+++++.|+||...|+||++|++.+|+|+
T Consensus 157 ~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~~a~~~~diR~ 230 (346)
T PRK00466 157 YRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPAKLYLHFDVRY 230 (346)
T ss_pred eeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCCceEEEEEEEe
Confidence 6799999999999999999986 4999999999999976522 223468999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCc--cccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHH
Q 021680 162 FSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF 239 (309)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~ 239 (309)
.|+++.+++.++|++.+++ +++++. ..+++ .+.++++++.+++++++. |.++ .+..++|++|+++
T Consensus 231 ~p~~~~~~v~~~i~~~~~~------~~~~~~----~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~--~~~~~~g~tD~~~ 297 (346)
T PRK00466 231 AINNKRDDLISEIKDKFQE------CGLKIV----DETPPVKVSINNPVVKALMRALLKQ-NIKP--RLVRKAGTSDMNI 297 (346)
T ss_pred CCCCCHHHHHHHHHHHHhh------CcEeec----cCCCCcccCCCCHHHHHHHHHHHHh-CCCc--eEEecCCcCcHHH
Confidence 9999999999999988864 233322 22333 344688999999999985 8765 3467788999999
Q ss_pred Hhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 021680 240 FAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 293 (309)
Q Consensus 240 ~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~~ 293 (309)
|.+. .|++. +||+.. ..+|++|||++++++.+++++|+.++..|+++
T Consensus 298 ~~~~~~~~v~--fGpg~~-----~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 298 LQKITTSIAT--YGPGNS-----MLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred HHHhCCCEEE--ECCCCc-----ccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 9876 44443 576542 35999999999999999999999999999854
No 20
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.1e-36 Score=278.06 Aligned_cols=263 Identities=18% Similarity=0.197 Sum_probs=207.5
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
+|||||+++++|+|++.|++. .++++|.|+|++|||.| .|++++++.+.++ .|++++. +|++... ...
T Consensus 109 ~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~-~d~~i~~-----ep~~~~~---~~~ 177 (383)
T PRK05111 109 TADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR-PDCAIIG-----EPTSLKP---VRA 177 (383)
T ss_pred cccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC-CCEEEEc-----CCCCCce---eec
Confidence 677999999999999999864 46789999999999988 4999999877554 4777763 4554321 223
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----cCCC---CCCeeEEEEEEecCCcCceecCeEE
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR----EADP---LDSQVLTVAKFEGGGAFNIIPDSVT 154 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~----~~~~---~~~~t~~i~~i~gg~~~n~vP~~~~ 154 (309)
++|..+++|+++|+++|++.|+.|.|||..++++|.+|+.+... ...+ ...+++|++.|+||...|+||++|+
T Consensus 178 ~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~NvVP~~~~ 257 (383)
T PRK05111 178 HKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAFTVPYPTLNLGHIHGGDAPNRICGCCE 257 (383)
T ss_pred ccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccCCCCCCceeEeeeecCCcCcccCCceE
Confidence 56999999999999999999999999999999999999876321 1111 2467999999999999999999999
Q ss_pred EEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCCC
Q 021680 155 IGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLM 232 (309)
Q Consensus 155 ~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (309)
+.+|+|+.|+++.+++.++|++.+++.+...+.+++++.. ...+|++ +.++++++.++++ +|.++ ....
T Consensus 258 ~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~----~g~~~----~~~~ 328 (383)
T PRK05111 258 LHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL-HPPIPGYECPADHQLVRVVEKL----LGHKA----EVVN 328 (383)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc-ccCCCCcCCCCCCHHHHHHHHH----hCCCC----ceee
Confidence 9999999999999999999999999887777766666532 1234433 3456677766544 45543 2345
Q ss_pred CCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 233 GTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 233 g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
+++|+.++... +|++.+ ||+.. ..+|++||+++++++.+++++|++++.+++.
T Consensus 329 ~~~Da~~~~~~g~p~v~~--G~g~~-----~~~H~~~E~v~~~~l~~~~~i~~~~~~~~~~ 382 (383)
T PRK05111 329 YCTEAPFIQQLGCPTLVL--GPGSI-----EQAHQPDEYLELSFIKPTRELLRQLIHHFCL 382 (383)
T ss_pred eeccHHHHHhcCCCEEEE--CCCch-----HhCcCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 78999998765 887764 65532 2499999999999999999999999999873
No 21
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=7.9e-36 Score=270.81 Aligned_cols=259 Identities=19% Similarity=0.170 Sum_probs=200.4
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTL 82 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 82 (309)
|||||+++++|+|+++|++.+..++++|.|+|++|||.|+ |++.+++++.. ..|++++.+++. ..+.+. ..+
T Consensus 111 ~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~iv~ep~~--~~~~v~----~~~ 183 (376)
T PRK07473 111 LDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVLVPEPGR--PDNGVV----TGR 183 (376)
T ss_pred hhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEEEeCCCC--CCCCEE----EEC
Confidence 5599999999999999998887778899999999999985 89999876543 468888865532 112222 235
Q ss_pred cceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEec
Q 021680 83 AAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 83 ~g~~~~~i~~~G~~~Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
+|..+++|+++|+++|++ .|+.|.|||..+++++.+|+++.. ...++|++.|+||...|+||++|++.+++|.
T Consensus 184 ~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i~gg~~~n~VP~~~~~~~d~r~ 257 (376)
T PRK07473 184 YAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIVHGGQWVNCVATTCTGEALSMA 257 (376)
T ss_pred eeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeEEcCCCCcCCCCceEEEEEEEe
Confidence 699999999999999987 599999999999999999988742 1368999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCcccc---CHHHHHHHHHHHHHhcCccccccCCCCCCCchHH
Q 021680 162 FSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN---NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 238 (309)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 238 (309)
......+++.+++.+.+. ...++.++++. ....|+... ++++.+.++++.+. +|.++ ....++|++|++
T Consensus 258 ~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~--~~~~~~g~tDa~ 329 (376)
T PRK07473 258 KRQADLDRGVARMLALSG---TEDDVTFTVTR--GVTRPVWEPDAGTMALYEKARAIAGQ-LGLSL--PHGSAGGGSDGN 329 (376)
T ss_pred CCHhHHHHHHHHHHHhhC---cCCCeEEEEEc--cccCCCCCCChhHHHHHHHHHHHHHH-cCCCC--ccccCccccHhh
Confidence 887777777776665554 12334444432 122333322 34577777776655 58765 346788999999
Q ss_pred HHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021680 239 FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 290 (309)
Q Consensus 239 ~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~ 290 (309)
+|... +|++. ++||++. .+|++|||++++++.+++++|++++.++
T Consensus 330 ~~~~~giP~v~-g~Gpg~~------~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 330 FTGAMGIPTLD-GLGVRGA------DYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred hHHhcCCCEEE-eccCCCC------CCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 99874 99775 4577653 3899999999999999999999998653
No 22
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-36 Score=283.75 Aligned_cols=279 Identities=15% Similarity=0.174 Sum_probs=211.4
Q ss_pred Cccch---hhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCC--CCcceeE------EecC--C
Q 021680 1 MHACG---HDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGAL--ENVEAIF------GLHV--S 66 (309)
Q Consensus 1 ~h~~g---~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~--~~~d~~~------~~~~--~ 66 (309)
+|+|| |||+++++|.|++.|++.+.+++++|.|+|++|||+|+ |++++.+.... ...|+++ ..++ .
T Consensus 147 lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l~~~~~~~~~~~~~~~~i~~~~~~~ 226 (486)
T PRK08262 147 VWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELLKERGVRLAFVLDEGGAITEGVLPG 226 (486)
T ss_pred EEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHHHHhcCCEEEEEeCCceecccccCC
Confidence 36666 89999999999999999888899999999999999885 88877753110 1233332 2221 1
Q ss_pred CCCCCceEEecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----------------c----
Q 021680 67 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR----------------E---- 126 (309)
Q Consensus 67 ~~~~~~~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~----------------~---- 126 (309)
..+|++.+ +..++|..+++|+++|+++|++.|+. .||+..++++|.+|++...+ .
T Consensus 227 ~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (486)
T PRK08262 227 VKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDNPLPMRLRGPVAEMFDTLAPEMSFA 301 (486)
T ss_pred CCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCCCCCccChHHHHHHHHHHHhcCHH
Confidence 23454443 34467999999999999999999999 99999999999999863100 0
Q ss_pred ------------------------CCCCCCeeEEEEEEecCCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 021680 127 ------------------------ADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 182 (309)
Q Consensus 127 ------------------------~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~ 182 (309)
......+|+|++.|+||...|+||++|++.+|+|++|+++.+++.++|++.+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~- 380 (486)
T PRK08262 302 QRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVNFRILPGDSVESVLAHVRRAVADD- 380 (486)
T ss_pred HHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEEEEeCCCCCHHHHHHHHHHHhccC-
Confidence 0012357899999999999999999999999999999999999999999988742
Q ss_pred HHhCCeeEEEEecc--CCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCC
Q 021680 183 SVQRCNATVTFDDK--SFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGK 260 (309)
Q Consensus 183 ~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~ 260 (309)
.+++++... .+.+..+.++++++.+++++++++|.... .+....|++|+++|....|.++. +++...+||.
T Consensus 381 -----~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g~tDa~~~~~~~p~~~~-~~~~~~gpg~ 453 (486)
T PRK08262 381 -----RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVGATDSRHYSGISDNVYR-FSPLRLSPED 453 (486)
T ss_pred -----ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecccccHHHHHHhcCCeEE-ECCccCCccc
Confidence 344444321 22334556788999999999998874322 33457789999999877775543 3333334555
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 261 FETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 261 ~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
...+|++|||++++++.+++++|..++.++++
T Consensus 454 ~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 454 LARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred ccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 56799999999999999999999999998874
No 23
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-35 Score=273.21 Aligned_cols=273 Identities=18% Similarity=0.191 Sum_probs=212.8
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC------ccHHHHHHc------------------------CC
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLDA------------------------GA 53 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~~~~~------------------------~~ 53 (309)
.|+|+++|++++|+++|++.+..++++|.|++++|||.| .|++.+++. ++
T Consensus 91 ~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (413)
T PRK09290 91 FDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDALALRDADGVSFAEALAAIGY 170 (413)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHHHhccCCCCCCHHHHHHHcCC
Confidence 467999999999999999988888999999999999984 277766532 21
Q ss_pred CCCcceeEEe--cCCCC--------------CCCceEEecccccccceeEEEEEEEcCCCCCC-CC-CCCCCHHHHHHHH
Q 021680 54 LENVEAIFGL--HVSSL--------------FPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IP-QHTIDPIVAASNV 115 (309)
Q Consensus 54 ~~~~d~~~~~--~~~~~--------------~~~~~~~~~~g~~~~g~~~~~i~~~G~~~Hs~-~p-~~g~NAi~~~~~~ 115 (309)
+.|++++. +|+.. +|++.. ......++|..|++|+++|+++|++ .| +.|.|||..++++
T Consensus 171 --~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~ 247 (413)
T PRK09290 171 --DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAEI 247 (413)
T ss_pred --ChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHHH
Confidence 23444432 12110 222211 0112457799999999999999988 48 5899999999999
Q ss_pred HHHHHHhhcccCCCCCCeeEEEEEEecC-CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEe
Q 021680 116 IVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFD 194 (309)
Q Consensus 116 i~~l~~~~~~~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 194 (309)
+..|+++..+.. ...+++++.+.+| ...|+||++|++.+|+|+.|.++.+++.++|++++++.+...+++++++.
T Consensus 248 i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~~~~~~e~~~- 323 (413)
T PRK09290 248 ILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRAAAEAIAARRGVEVEIEL- 323 (413)
T ss_pred HHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE-
Confidence 999987653221 2468999999975 79999999999999999999999999999999999988766677777665
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCC
Q 021680 195 DKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNED 274 (309)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~ 274 (309)
...++++..++++++.+++++++. |.++ ......|++|+++|.+.+|++++ +||... ..+|++||+++++
T Consensus 324 -~~~~~~~~~d~~lv~~l~~a~~~~-g~~~--~~~~~~g~tDa~~~~~~iP~~~~-~gp~~~-----~~~H~~dE~v~i~ 393 (413)
T PRK09290 324 -ISRRPPVPFDPGLVAALEEAAERL-GLSY--RRLPSGAGHDAQILAAVVPTAMI-FVPSVG-----GISHNPAEFTSPE 393 (413)
T ss_pred -EecCCCccCCHHHHHHHHHHHHHc-CCCc--cccCCccchHHHHHhccCCEEEE-EeccCC-----CCCCCccccCCHH
Confidence 345667778899999999999775 7654 33567889999999877997554 344332 2389999999999
Q ss_pred chHHHHHHHHHHHHHHHhc
Q 021680 275 ALPYGAALHASLATRYLLE 293 (309)
Q Consensus 275 ~~~~~~~i~~~~~~~~~~~ 293 (309)
++.+++++|+.++.+++.+
T Consensus 394 ~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 394 DCAAGANVLLHALLELAEE 412 (413)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999853
No 24
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=4.4e-36 Score=274.84 Aligned_cols=267 Identities=16% Similarity=0.165 Sum_probs=206.5
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCcc--HHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGG--AKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
|||||+++++++|+++|++.+..++++|.|++++|||.++| .+.+++...+ .+|++++.+ |++.. +. ..
T Consensus 107 ~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~iv~e-----p~~~~-i~--~g 177 (395)
T TIGR03320 107 SDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI-KPEFVVITE-----PTDMN-IY--RG 177 (395)
T ss_pred cCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC-CCCEEEEcC-----CCccc-eE--Ee
Confidence 44799999999999999998877889999999999997644 4566655433 478888754 33321 11 23
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc--CCCCCCeeEEEEEEecCC-cCceecCeEEEEEE
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE--ADPLDSQVLTVAKFEGGG-AFNIIPDSVTIGGT 158 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~--~~~~~~~t~~i~~i~gg~-~~n~vP~~~~~~~d 158 (309)
++|..+++|+++|+++|++.|+.|.|||..++++|..|+++.... ....+..+++++.|++|. ..|+||++|++.+|
T Consensus 178 ~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~t~~v~~i~~g~~~~NviP~~~~~~~d 257 (395)
T TIGR03320 178 QRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFFSSPSRCAVADGCTISID 257 (395)
T ss_pred cceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCcCceeeeeeecCCCCcCccCCEEEEEEE
Confidence 569999999999999999999999999999999999998874322 122345789999999885 88999999999999
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec--c-----------CCCCcc--ccCHHHHHHHHHHHHHhcCcc
Q 021680 159 FRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--K-----------SFYPVT--VNNKNLHEHFQKVAADMLGVQ 223 (309)
Q Consensus 159 iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~--~-----------~~~~~~--~~~~~~~~~~~~~~~~~~g~~ 223 (309)
+|+.|+++.+++.++|+++++.. +..+++++.. . ..+|++ +.++++++.+++++++++|.+
T Consensus 258 iR~~p~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~ 333 (395)
T TIGR03320 258 RRLTWGETWEYALEQIRNLPAVQ----GAEAKVEMYNYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKRLFGKE 333 (395)
T ss_pred EecCCCCCHHHHHHHHHHHHhhc----CCCceEeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999886532 2233443321 0 123443 457789999999999998887
Q ss_pred ccccCCCCCCCchHH-HHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 224 NIKENRPLMGTEDFS-FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 224 ~~~~~~~~~g~tD~~-~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
+. ....++++|++ ++.+. +|++. +||++. ..+|++|||++++++.+++++|++++.+||.
T Consensus 334 ~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~nE~v~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 334 PG--VDKWTFSTNGVSIMGRHGIPVIG--FGPGDE-----DQAHAPNEKTWKEDLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred Cc--eeecceecccceehhhcCCCEEE--ECCCch-----hhccCCCcEEEHHHHHHHHHHHHHHHHHhhC
Confidence 63 24567778874 55554 89775 576542 3599999999999999999999999999983
No 25
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=4.7e-36 Score=272.06 Aligned_cols=256 Identities=22% Similarity=0.256 Sum_probs=200.9
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
+|||||+++++|+|+++|++. .++++|.|+|++|||.| .|++++++++.+ ..|++++. +|++..... .
T Consensus 96 ~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~-----ep~~~~~~~---~ 164 (364)
T TIGR01892 96 TCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIG-----EPTRLIPVR---A 164 (364)
T ss_pred ccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEEC-----CCCCceeEE---e
Confidence 345999999999999999875 46889999999999988 599999988753 46777763 555554332 2
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CC--CCCeeEEEEEEecCCcCceecCeEE
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DP--LDSQVLTVAKFEGGGAFNIIPDSVT 154 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~--~~~~t~~i~~i~gg~~~n~vP~~~~ 154 (309)
++|..+++|+++|+++|++.|+.|.|||..++++|.+|+++..... .. ...++++++.|+||...|+||++|+
T Consensus 165 ~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~~~ 244 (364)
T TIGR01892 165 HKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGVIQGGKAVNIIPGACE 244 (364)
T ss_pred eceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEeeeecCCCCcccCCeEE
Confidence 5689999999999999999999999999999999999987642211 11 1247999999999999999999999
Q ss_pred EEEEEecCChHHHHHHHHHHHHHHHHHHH-HhCCeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCC
Q 021680 155 IGGTFRAFSKESIIQLKQRIEEVVMKQAS-VQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPL 231 (309)
Q Consensus 155 ~~~diR~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 231 (309)
+.+|+|++|.++.+++.++|+++++..+. ..+++++++.. ..+|+. +.++++++.++++ +|.++ ...
T Consensus 245 ~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~----~~~ 314 (364)
T TIGR01892 245 FVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEVV--STDPGVNTEPDAELVAFLEEL----SGNAP----EVV 314 (364)
T ss_pred EEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEEc--cCCCCcCCCCCCHHHHHHHHH----hCCCC----cee
Confidence 99999999999999999999999987653 33555555542 334443 4466778777654 45433 235
Q ss_pred CCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 021680 232 MGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASL 286 (309)
Q Consensus 232 ~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~ 286 (309)
+++||+++|.+. +|++.+ ||+.. ..+|++|||++++++.+++++|..+
T Consensus 315 ~~~tD~~~~~~~gip~v~~--Gpg~~-----~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 315 SYGTEAPQFQELGAEAVVC--GPGDI-----RQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred cccccHHHHHhCCCcEEEE--CCCCh-----HhCCCCCceeeHHHHHHHHHHHHHh
Confidence 668999999875 997754 65442 3499999999999999999999876
No 26
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.8e-35 Score=270.13 Aligned_cols=273 Identities=18% Similarity=0.187 Sum_probs=212.8
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC------ccHHHHHHcCCC-----------------------
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLDAGAL----------------------- 54 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~~~~~~~~----------------------- 54 (309)
.+.|++++++|+|+++|++.+..++++|.|+|++|||.| .|+.++......
T Consensus 94 ~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (412)
T PRK12893 94 FDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDALARRDADGITLGEALARIGY 173 (412)
T ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCC
Confidence 356899999999999999988889999999999999986 277766543210
Q ss_pred --------CCcceeEEecCCCC-----CCCceEEecccccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHHHHHHH
Q 021680 55 --------ENVEAIFGLHVSSL-----FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASNVIVSL 119 (309)
Q Consensus 55 --------~~~d~~~~~~~~~~-----~~~~~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~-p~-~g~NAi~~~~~~i~~l 119 (309)
.+.+..+.+|..++ ++.. .. ....++|..|++|+++|+++|++. |+ .|.|||..+++++.+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~--i~~~~kG~~~~~i~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l 250 (412)
T PRK12893 174 RGTARVGRRAVDAYLELHIEQGPVLEAEGLP-IG--VVTGIQGIRWLEVTVEGQAAHAGTTPMAMRRDALVAAARIILAV 250 (412)
T ss_pred CcccccccCCccEEEEEEeccCHHHHHCCCc-EE--EEeeecccEEEEEEEEEECCCcCCCcchhccCHHHHHHHHHHHH
Confidence 01223333443211 1111 11 124577999999999999999886 84 8999999999999999
Q ss_pred HHhhcccCCCCCCeeEEEEEEecC-CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCC
Q 021680 120 QHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF 198 (309)
Q Consensus 120 ~~~~~~~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~ 198 (309)
+++..+... ..+++++.|++| ...|+||++|++.+|+|+.|+++.+++.++|++++++.+...+.+++++. ...
T Consensus 251 ~~~~~~~~~---~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~v~~~~--~~~ 325 (412)
T PRK12893 251 ERIAAALAP---DGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAKIAAARGVQVTVET--VWD 325 (412)
T ss_pred HHHHHhcCC---CceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE--Eec
Confidence 887543221 478999999985 79999999999999999999999999999999999988766677666654 245
Q ss_pred CCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 021680 199 YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 278 (309)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~ 278 (309)
+++...++++++.+++++++. |.++ .....+|+||+++|.+.+|.++. +||+.. ..+|++|||++++++.+
T Consensus 326 ~~~~~~d~~l~~~l~~~~~~~-g~~~--~~~~~~g~tD~~~~~~~~p~~v~-~gp~~~-----~~~Hs~dE~v~i~~l~~ 396 (412)
T PRK12893 326 FPPVPFDPALVALVEAAAEAL-GLSH--MRMVSGAGHDAMFLARVAPAAMI-FVPCRG-----GISHNEAEDTEPADLAA 396 (412)
T ss_pred CCCcCCCHHHHHHHHHHHHHc-CCCc--cccCCccHHHHHHHHhhCCEEEE-EeecCC-----CCCCCccccCCHHHHHH
Confidence 667777889999999988874 7665 33677889999999887885444 455432 24899999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 021680 279 GAALHASLATRYLLE 293 (309)
Q Consensus 279 ~~~i~~~~~~~~~~~ 293 (309)
++++|..++.+++++
T Consensus 397 ~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 397 GANVLLHAVLELAGR 411 (412)
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999998753
No 27
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.8e-35 Score=271.15 Aligned_cols=272 Identities=20% Similarity=0.191 Sum_probs=212.5
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC------ccHHHHHHcCC----------CC-------------
Q 021680 5 GHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLDAGA----------LE------------- 55 (309)
Q Consensus 5 g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~~~~~~~----------~~------------- 55 (309)
+.++|++++|.|++.|++.+..++++|.|++++|||.+ .|++.++.... .+
T Consensus 93 dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 172 (412)
T PRK12892 93 DGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALAARCRSDGVPLRDALAAAGL 172 (412)
T ss_pred cchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCC
Confidence 44789999999999999999899999999999999984 28888874210 00
Q ss_pred CcceeEEe-----------cCCC---CCCCce-EEecccccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHHHHHH
Q 021680 56 NVEAIFGL-----------HVSS---LFPVGT-VASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASNVIVS 118 (309)
Q Consensus 56 ~~d~~~~~-----------~~~~---~~~~~~-~~~~~g~~~~g~~~~~i~~~G~~~Hs~~-p~-~g~NAi~~~~~~i~~ 118 (309)
..|+++.. |.+. .++++. ..+ ...++|..|++|+++|+++|++. |+ .|.|||..+++++.+
T Consensus 173 ~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~~~~i--~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~ 250 (412)
T PRK12892 173 AGRPRPAADRARPKGYLEAHIEQGPVLEQAGLPVGV--VTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAA 250 (412)
T ss_pred ChhhcccccccCccEEEEEEeccCHhHhhCCCcEEE--EEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHH
Confidence 01222222 2111 011121 111 23467999999999999999876 65 689999999999999
Q ss_pred HHHhhcccCCCCCCeeEEEEEEecC-CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccC
Q 021680 119 LQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKS 197 (309)
Q Consensus 119 l~~~~~~~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~ 197 (309)
|+++..+.. .+.+++++.|+|| ...|+||++|++.+|+|+.|.++.+++.++|++++++.+...++++++... .
T Consensus 251 l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~e~~~~--~ 325 (412)
T PRK12892 251 IDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCREIARRRGCRVSVDRI--A 325 (412)
T ss_pred HHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEE--e
Confidence 988653322 2478999999987 799999999999999999999999999999999999887777777777653 4
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchH
Q 021680 198 FYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 277 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~ 277 (309)
.++++..++++++.+++++++ +|.++. ....+|++|+++|.+.+|++++ +||+.. ..+|++|||++++++.
T Consensus 326 ~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~gp~~~-----~~~H~~~E~v~i~~l~ 396 (412)
T PRK12892 326 EYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FVPSKG-----GISHNPAEDTSPADLA 396 (412)
T ss_pred cCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-EeccCC-----CCCCCCCCCCCHHHHH
Confidence 566777888999999999998 687653 3667899999999877886554 455432 2389999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 021680 278 YGAALHASLATRYLL 292 (309)
Q Consensus 278 ~~~~i~~~~~~~~~~ 292 (309)
+++++|+.++.+++.
T Consensus 397 ~~~~il~~~l~~~~~ 411 (412)
T PRK12892 397 QGARVLADTLRRLAR 411 (412)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998864
No 28
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=277.29 Aligned_cols=272 Identities=19% Similarity=0.184 Sum_probs=209.1
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CC-ccHHHHHHcCC-CCCcceeEEecCCC------CCCCce
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGA-LENVEAIFGLHVSS------LFPVGT 73 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~g-~G~~~~~~~~~-~~~~d~~~~~~~~~------~~~~~~ 73 (309)
+|||||+++++|+|++.|++.+..++++|.|+|++||| .| .|++.+++... .-+.|+++. ++.. ++|+..
T Consensus 139 a~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~~~~i~-e~~~~~~~~~gept~~ 217 (472)
T PRK09133 139 TSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLIDAEFALN-EGGGGTLDEDGKPVLL 217 (472)
T ss_pred cccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccCeEEEEE-CCCccccCCCCCceEE
Confidence 46889999999999999999888899999999999999 56 48888887532 113577776 5433 344433
Q ss_pred EEecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---------------------------
Q 021680 74 VASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE--------------------------- 126 (309)
Q Consensus 74 ~~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~--------------------------- 126 (309)
. ....++|..+++|+++|+++|++.|+ +.|||..++++|.+|+++..+.
T Consensus 218 ~---i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (472)
T PRK09133 218 T---VQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRA 293 (472)
T ss_pred E---eeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHH
Confidence 1 23456799999999999999999997 4899999999999997641100
Q ss_pred -------------------CCCCCCeeEEEEEEecCCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCC
Q 021680 127 -------------------ADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRC 187 (309)
Q Consensus 127 -------------------~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~ 187 (309)
......+++|++.|+||...|+||++|++.+|+|++|+++.+++.++|++++++ .
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~~~~e~v~~~I~~~i~~------~ 367 (472)
T PRK09133 294 FAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPGDTIEAVRATLKQVVAD------P 367 (472)
T ss_pred HhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCchhHHHHHHHHHHHhcC------C
Confidence 000235789999999999999999999999999999999999999999998853 2
Q ss_pred eeEEEEecc-CCCCccccCHHHHHHHHHHHHHhc-CccccccCCCCCCCchHHHHhhh-cCeeEE--EeccCCCCCCCCC
Q 021680 188 NATVTFDDK-SFYPVTVNNKNLHEHFQKVAADML-GVQNIKENRPLMGTEDFSFFAEA-IPGYFY--YLGMNDETKGKFE 262 (309)
Q Consensus 188 ~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~--~~G~~~~~~g~~~ 262 (309)
.++++.... ...++.+.+.++++.+++++++++ |.+. .+..+.|+||++++.+. +|++.+ .+||+. ..
T Consensus 368 ~v~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~~~~~gip~~~~~~i~gp~~-----~~ 440 (472)
T PRK09133 368 AIKITRIGDPSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRYLRAAGIPTYGVSGLFGDPD-----DT 440 (472)
T ss_pred CEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHHHHhcCCCceeecCcccCcc-----cc
Confidence 344443211 122234557789999999999887 5543 34567889999999875 887532 134332 23
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 263 TGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 263 ~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
.+|++|||++++++.+++++|..++.++++
T Consensus 441 ~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 441 FAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred cCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 599999999999999999999999999874
No 29
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=2.3e-35 Score=271.06 Aligned_cols=265 Identities=15% Similarity=0.168 Sum_probs=209.6
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTL 82 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 82 (309)
+|||||+++++++|+++|++.+..++++|.|+|++|||.|.|++.++.+++ ..++.+.+++ .+.+.+... .
T Consensus 138 g~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~~~----~ 208 (408)
T PRK05469 138 GADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELEYE----N 208 (408)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEEec----c
Confidence 489999999999999999887767889999999999998878888765433 3455555443 345554332 3
Q ss_pred cceeEEEEEEEcCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEec
Q 021680 83 AAGGFFEAVINGKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 83 ~g~~~~~i~~~G~~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
+|..+++|+++|+++|++. |+.|.|||..++++|..|+++..+........+++++.|+|| |++|++.+|+|+
T Consensus 209 ~g~~~~~i~v~Gk~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~ 282 (408)
T PRK05469 209 FNAASAKITIHGVNVHPGTAKGKMVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRD 282 (408)
T ss_pred CceeEEEEEEeeecCCCCCCcccccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEec
Confidence 5788999999999999876 899999999999999998876432221222345788888876 799999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHh-CCeeEEEEec-cCC-CCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHH
Q 021680 162 FSKESIIQLKQRIEEVVMKQASVQ-RCNATVTFDD-KSF-YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 238 (309)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~v~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 238 (309)
.+.++.+++.++|++++++.+... ++++++++.. ... .+++..++++++.+++++++. |.++. ...+.|++|++
T Consensus 283 ~~~e~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~ 359 (408)
T PRK05469 283 FDREGFEARKALMQEIAKKVNAKYGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGS 359 (408)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHH
Confidence 999999999999999999987766 5677776542 111 124667889999999999885 87653 35678999999
Q ss_pred HHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 021680 239 FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 293 (309)
Q Consensus 239 ~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~~ 293 (309)
+|... +|++.+ |+++. .+|++||+++++++.+++++|.+++..|+.+
T Consensus 360 ~~~~~giP~v~~--gpG~~------~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 360 QLSFMGLPCPNI--FTGGH------NFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred HHhhCCCceEEE--CcCcc------cCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 99864 998775 54432 3999999999999999999999999998853
No 30
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=7.2e-36 Score=273.35 Aligned_cols=269 Identities=16% Similarity=0.152 Sum_probs=208.2
Q ss_pred ccch---hhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC--ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEe
Q 021680 2 HACG---HDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS 76 (309)
Q Consensus 2 h~~g---~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 76 (309)
|+|| |||+++++|.|++.|++.+..+++++.|++++|||.+ .|..++++++.+ ..|++++.+ |++. .+
T Consensus 102 yGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~i~~e-----p~~~-~i 174 (395)
T TIGR03526 102 YGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI-KPEFVVITE-----PTDM-NI 174 (395)
T ss_pred EecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC-CCCEEEecC-----CCCc-eE
Confidence 5666 8999999999999999988778889999999999953 356677766554 468888754 3332 12
Q ss_pred cccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-C-CCCCCeeEEEEEEecCC-cCceecCeE
Q 021680 77 RPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-A-DPLDSQVLTVAKFEGGG-AFNIIPDSV 153 (309)
Q Consensus 77 ~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-~-~~~~~~t~~i~~i~gg~-~~n~vP~~~ 153 (309)
. ..++|..+++|+++|+++|++.|+.|.|||..++++|.+|+++.... . ...+..+++++.|++|. ..|+||++|
T Consensus 175 ~--~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~g~~~~nviP~~~ 252 (395)
T TIGR03526 175 Y--RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFFSSPSRCAVADGC 252 (395)
T ss_pred E--EEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCccceeeeeeecCCCCCCccCCeE
Confidence 2 23569999999999999999999999999999999999998874322 1 22345799999999875 899999999
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec--cC-----------CCCc--cccCHHHHHHHHHHHHH
Q 021680 154 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KS-----------FYPV--TVNNKNLHEHFQKVAAD 218 (309)
Q Consensus 154 ~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~--~~-----------~~~~--~~~~~~~~~~~~~~~~~ 218 (309)
++.+|+|++|+++.+++.+.|+++++.. +...++++.. .+ .+|+ .+.++++++++++++++
T Consensus 253 ~~~~d~R~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~ 328 (395)
T TIGR03526 253 TISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAEVEMYEYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKR 328 (395)
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHhc----CCcceEEEeccccccccccccccccccCccccCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999987532 2233333211 00 2333 34578899999999999
Q ss_pred hcCccccccCCCCCCCchHHH-Hhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 219 MLGVQNIKENRPLMGTEDFSF-FAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 219 ~~g~~~~~~~~~~~g~tD~~~-~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
++|.++. ....++++|+++ +.+. +|++. +||++. ..+|++|||++++++.+++++|++++..+|+
T Consensus 329 ~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~dE~i~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 329 LFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGPGDE-----DQAHAPNEKTWKEDLVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred HhCCCCc--eeeeeeecccceehhhcCCCEEE--ECCcch-----hhccCCCceEEHHHHHHHHHHHHHHHHHhcC
Confidence 9888763 245677788754 4444 89775 576542 3599999999999999999999999999873
No 31
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=7.5e-36 Score=273.58 Aligned_cols=270 Identities=14% Similarity=0.115 Sum_probs=209.3
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC--ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
||+|++++++|+|+++|++.+..++++|.|+|++|||.+ .|.++++++..+ .+|++++.++.. ..+. ..
T Consensus 109 ~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~~-~~d~~i~~e~~~----~~i~----~~ 179 (399)
T PRK13004 109 SDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDKI-KPDFVVITEPTD----LNIY----RG 179 (399)
T ss_pred cccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcCC-CCCEEEEccCCC----CceE----Ee
Confidence 356999999999999999988888999999999999964 367777776544 468888865421 1121 22
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc--cCCCCCCeeEEEEEEecC-CcCceecCeEEEEEE
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR--EADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGT 158 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~--~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~d 158 (309)
++|..+++|+++|+++|++.|+.|.|||..++++|..|+.+... .....+..+++++.|.+| .+.|+||++|++.+|
T Consensus 180 ~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~d 259 (399)
T PRK13004 180 QRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLGKGTLTVSDIFSTSPSRCAVPDSCAISID 259 (399)
T ss_pred cceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCCCceEEEeeeecCCCCCCccCCEEEEEEE
Confidence 56999999999999999999999999999999999999887543 222234568899999877 589999999999999
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEe-----------ccCCCCcc--ccCHHHHHHHHHHHHHhcCcccc
Q 021680 159 FRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFD-----------DKSFYPVT--VNNKNLHEHFQKVAADMLGVQNI 225 (309)
Q Consensus 159 iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~ 225 (309)
+|++|.++.+++.++|++++.. ...+.++++... ....+|+. +.++++++.+++++++++|.++.
T Consensus 260 iR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~a~~~~~g~~~~ 337 (399)
T PRK13004 260 RRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYFPTWLYPEDHEFVKAAVEAYKGLFGKAPE 337 (399)
T ss_pred EcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccccccccCCCCHHHHHHHHHHHHHhCCCCe
Confidence 9999999999999999988432 122333332210 01123443 34788999999999999888763
Q ss_pred ccCCCCCCCchHHHHhh--hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 021680 226 KENRPLMGTEDFSFFAE--AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLLE 293 (309)
Q Consensus 226 ~~~~~~~g~tD~~~~~~--~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~~ 293 (309)
....++++|++.+.+ .+|++. +||+.. ..+|++|||++++++.+++++|.+++.+||++
T Consensus 338 --~~~~~~~td~~~~~~~~Gip~v~--~Gpg~~-----~~aH~~nE~i~i~~l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 338 --VDKWTFSTNGVSIAGRAGIPTIG--FGPGKE-----PLAHAPNEYTWKEQLVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred --ecccccccCCeEEehhcCCCEEE--ECCCcc-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhhc
Confidence 356777888887753 389775 576542 34999999999999999999999999999954
No 32
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.5e-34 Score=266.31 Aligned_cols=273 Identities=16% Similarity=0.144 Sum_probs=210.0
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc------cHHHHHHc------------------------C
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG------GAKKMLDA------------------------G 52 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~------G~~~~~~~------------------------~ 52 (309)
..|++++++++|+|+++|++.+..++++|.|++++|||.|+ |++.+... |
T Consensus 91 ~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 170 (414)
T PRK12890 91 RYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIG 170 (414)
T ss_pred CcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcC
Confidence 46889999999999999999888899999999999999742 65544321 2
Q ss_pred CCCC-----------cceeEEecCCCC-----CCCceEEecccccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHH
Q 021680 53 ALEN-----------VEAIFGLHVSSL-----FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASN 114 (309)
Q Consensus 53 ~~~~-----------~d~~~~~~~~~~-----~~~~~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~-p~-~g~NAi~~~~~ 114 (309)
+..+ .+..+.+|...+ .++.. . ....++|..|++|+++|+++|++. |+ .+.|||..+++
T Consensus 171 ~~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~~~-~--i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~ 247 (414)
T PRK12890 171 GDPDALPGALRPPGAVAAFLELHIEQGPVLEAEGLPI-G--VVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAE 247 (414)
T ss_pred CChhhccccccCCCCccEEEEEeeCcCHHHHhCCCce-E--EEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHH
Confidence 1111 111122222110 01111 1 123467999999999999999986 85 55899999999
Q ss_pred HHHHHHHhhcccCCCCCCeeEEEEEEecC-CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEE
Q 021680 115 VIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF 193 (309)
Q Consensus 115 ~i~~l~~~~~~~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~ 193 (309)
+|..|+++..+.. .+.+++++.|++| ...|+||++|++++|+|+.|.++.+++.++|++++++.+...+.+++++.
T Consensus 248 ~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 324 (414)
T PRK12890 248 LVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELER 324 (414)
T ss_pred HHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 9999998754332 3578899999975 89999999999999999999999999999999999988766677777665
Q ss_pred eccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCC
Q 021680 194 DDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNE 273 (309)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i 273 (309)
...++++..++++++.+.+++++. |.++ ....++|+||+++|.+..|.++. +||+.. ..+|++||++++
T Consensus 325 --~~~~~~~~~~~~l~~~l~~~~~~~-g~~~--~~~~~~g~tDa~~~~~~gp~~~~-~gp~~~-----~~aHs~dE~v~i 393 (414)
T PRK12890 325 --LSRSEPVPCDPALVDAVEAAAARL-GYPS--RRMPSGAGHDAAAIARIGPSAMI-FVPCRG-----GISHNPEEAMDP 393 (414)
T ss_pred --eecCCCcCCCHHHHHHHHHHHHHc-CCCc--eecCCcccHHHHHHHhhCCEEEE-EecCCC-----CCCCCcCccCCH
Confidence 345667778899999999999874 8765 33567899999999987665544 454432 248999999999
Q ss_pred CchHHHHHHHHHHHHHHHh
Q 021680 274 DALPYGAALHASLATRYLL 292 (309)
Q Consensus 274 ~~~~~~~~i~~~~~~~~~~ 292 (309)
+++.+++++|+.++.++..
T Consensus 394 ~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 394 EDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998864
No 33
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2e-35 Score=272.34 Aligned_cols=271 Identities=18% Similarity=0.157 Sum_probs=211.4
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTL 82 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 82 (309)
|||||+++++++|+++|++.+..++++|.|+|++|||+|+ |++++++++. ..|++++.++ ++... ..+
T Consensus 117 ~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~ep-----~~~~~----~~~ 185 (421)
T PRK08596 117 ADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQCCERGY--DADFAVVVDT-----SDLHM----QGQ 185 (421)
T ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHHHhcCC--CCCEEEECCC-----CCCcc----ccc
Confidence 4559999999999999999988899999999999999884 9999998864 4678887554 22221 124
Q ss_pred cceeEEEEEEEcC----------CCCCCCCCCCCCHHHHHHHHHHHHHHhhcc-----cCC--CCCCeeEEEEEEecCCc
Q 021680 83 AAGGFFEAVINGK----------GGHAAIPQHTIDPIVAASNVIVSLQHLVSR-----EAD--PLDSQVLTVAKFEGGGA 145 (309)
Q Consensus 83 ~g~~~~~i~~~G~----------~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~-----~~~--~~~~~t~~i~~i~gg~~ 145 (309)
+|..++.++++|+ .+|++.|+.|.|||..++++|..|+.+... ... .....++|++.|+||..
T Consensus 186 ~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~ 265 (421)
T PRK08596 186 GGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRH 265 (421)
T ss_pred cceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCC
Confidence 4776667777765 479999999999999999999999876321 111 12457899999999999
Q ss_pred CceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHh----CCeeEEEEe-----c--cCCCCcc--ccCHHHHHHH
Q 021680 146 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ----RCNATVTFD-----D--KSFYPVT--VNNKNLHEHF 212 (309)
Q Consensus 146 ~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~v~~~-----~--~~~~~~~--~~~~~~~~~~ 212 (309)
.|+||++|++.+|+|+.|+++.+++.++|++.+++..... ...+++++. . ...+|++ +.++++++++
T Consensus 266 ~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 345 (421)
T PRK08596 266 AAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTL 345 (421)
T ss_pred CCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhhCCceeEEecccccccccccCCCccCCCCchHHHHH
Confidence 9999999999999999999999999999999998754310 011222221 0 1124444 4578899999
Q ss_pred HHHHHHhcCccccccCCCCCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 213 QKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 213 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
.+++++++|.++ .+....|+||++++... +|++.+ ||+.. ..+|++|||++++++.+++++|++++.++|
T Consensus 346 ~~a~~~~~g~~~--~~~~~~g~tD~~~~~~~gip~v~~--Gpg~~-----~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~ 416 (421)
T PRK08596 346 SSAHESVLSKNA--ILDMSTTVTDGGWFAEFGIPAVIY--GPGTL-----EEAHSVNEKVEIEQLIEYTKVITAFIYEWC 416 (421)
T ss_pred HHHHHHHhCCCC--eeeEEeeecchhhhhhcCCCEEEE--CCCcc-----cccCCCCceEEHHHHHHHHHHHHHHHHHHh
Confidence 999999988876 44667788999999875 998754 65432 359999999999999999999999999999
Q ss_pred hcc
Q 021680 292 LEN 294 (309)
Q Consensus 292 ~~~ 294 (309)
+.+
T Consensus 417 ~~~ 419 (421)
T PRK08596 417 HTK 419 (421)
T ss_pred CCC
Confidence 654
No 34
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=9.4e-36 Score=272.02 Aligned_cols=263 Identities=19% Similarity=0.232 Sum_probs=202.6
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCC--CCCcceeEEecCCCCCCCceEEeccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGA--LENVEAIFGLHVSSLFPVGTVASRPG 79 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~g 79 (309)
+|||||+++++++|+++|++. .++++|.|+|++|||.| .|++++++... ....|+++.. +|++.. + .
T Consensus 102 ~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~~-----ep~~~~-~--~ 171 (385)
T PRK07522 102 TCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGCIVG-----EPTSMR-P--V 171 (385)
T ss_pred ccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEEEEc-----cCCCCe-e--e
Confidence 456899999999999999876 46889999999999987 59999987532 1236777763 454421 1 2
Q ss_pred ccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC------CC--CCeeEEEEEEecCCcCceecC
Q 021680 80 PTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD------PL--DSQVLTVAKFEGGGAFNIIPD 151 (309)
Q Consensus 80 ~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~------~~--~~~t~~i~~i~gg~~~n~vP~ 151 (309)
..++|..+++|+++|+++|++.|+.|.||+..++++|..|+++..+... .. ..++++++.|+||...|+||+
T Consensus 172 ~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~ 251 (385)
T PRK07522 172 VGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPYSTLQTGTIQGGTALNIVPA 251 (385)
T ss_pred eeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCcceeEEeeeecCccccccCC
Confidence 2356999999999999999999999999999999999999887432211 11 136899999999999999999
Q ss_pred eEEEEEEEecCChHHHHHHHHHHHHHHHH------HHHHhCCeeEEEEeccCCCCcccc--CHHHHHHHHHHHHHhcCcc
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIEEVVMK------QASVQRCNATVTFDDKSFYPVTVN--NKNLHEHFQKVAADMLGVQ 223 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~ 223 (309)
+|++.+|+|++|.++.+++.++|++.+++ .+...+++++++. ...+|++.. ++++++.+++++ +.+
T Consensus 252 ~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~ 325 (385)
T PRK07522 252 ECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP--LSAYPGLDTAEDAAAARLVRALT----GDN 325 (385)
T ss_pred ceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe--ccCCCCCCCCCCcHHHHHHHHHh----CCC
Confidence 99999999999999999999999999987 1333455555554 334566544 467777776543 443
Q ss_pred ccccCCCCCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 224 NIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 224 ~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
+ .....+++|+++|... +|++.+ ||+.. ..+|++|||++++++.+++++|..++..+.
T Consensus 326 ~---~~~~~~~td~~~~~~~gip~v~~--Gpg~~-----~~~H~~~E~i~i~~l~~~~~~~~~~~~~~~ 384 (385)
T PRK07522 326 D---LRKVAYGTEAGLFQRAGIPTVVC--GPGSI-----EQAHKPDEFVELAQLAACEAFLRRLLASLA 384 (385)
T ss_pred C---cceEeeecchHHhccCCCCEEEE--CCCCh-----hhCCCCCccccHHHHHHHHHHHHHHHHHHh
Confidence 3 1345678999999874 887654 65432 249999999999999999999999998764
No 35
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=2e-35 Score=273.38 Aligned_cols=273 Identities=15% Similarity=0.175 Sum_probs=206.9
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcC--CCCCcceeEEecCCCCCCCceEEeccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAG--ALENVEAIFGLHVSSLFPVGTVASRPG 79 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~g 79 (309)
+|||||+++++|.|++.|++.+ .++++|.|+|++|||.|+ |++.++++. .+ ++|++++ ++....+.+.-.+.
T Consensus 101 a~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~-~~d~vi~-E~~~~~~~~~~~i~-- 175 (436)
T PRK06446 101 ASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKL-KADSVIM-EGAGLDPKGRPQIV-- 175 (436)
T ss_pred ccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHh-CCCEEEE-CCCCccCCCCeEEE--
Confidence 5899999999999999887654 578899999999999985 777777652 23 4677765 43322122221222
Q ss_pred ccccceeEEEEEEEc--CCCCCCCCCCCCCHHHHHHHHHHHHHHhhc----------------------c-c--------
Q 021680 80 PTLAAGGFFEAVING--KGGHAAIPQHTIDPIVAASNVIVSLQHLVS----------------------R-E-------- 126 (309)
Q Consensus 80 ~~~~g~~~~~i~~~G--~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~----------------------~-~-------- 126 (309)
..++|..|++++++| +++|++.|+.|.|||..|+++|.+|.+... + .
T Consensus 176 ~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (436)
T PRK06446 176 LGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDIDVEELR 255 (436)
T ss_pred EecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCCHHHHH
Confidence 335799999999998 999999999999999999999999975420 0 0
Q ss_pred ---------C--------CCCCCeeEEEEEEecC----CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHh
Q 021680 127 ---------A--------DPLDSQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ 185 (309)
Q Consensus 127 ---------~--------~~~~~~t~~i~~i~gg----~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (309)
. .....+++|++.|++| ...|+||++|++.+|+|++|+++.+++.++|++.+++.
T Consensus 256 ~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~l~~~~~~~---- 331 (436)
T PRK06446 256 KALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDPYKIFELLKKHLQKV---- 331 (436)
T ss_pred HHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHHc----
Confidence 0 0122478999999887 46799999999999999999999999999999998753
Q ss_pred CCeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhh--hcCeeEEEeccCCCCCCCC
Q 021680 186 RCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE--AIPGYFYYLGMNDETKGKF 261 (309)
Q Consensus 186 ~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~v~~~~G~~~~~~g~~ 261 (309)
+..+++.+.. .++++ +.++++++.+++++++++|.++.. ....+|++|+++|.+ .+|++.+.+|++.++
T Consensus 332 ~~~~~~~~~~--~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~~gip~v~~~~g~g~~~---- 404 (436)
T PRK06446 332 GFNGEIIVHG--FEYPVRTSVNSKVVKAMIESAKRVYGTEPVV-IPNSAGTQPMGLFVYKLGIRDIVSAIGVGGYY---- 404 (436)
T ss_pred CCCeEEEEcC--CcceeecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCCcchHHHHHHHhCCCcceeecccCCCC----
Confidence 3345555432 23333 457889999999999998887632 134456678888865 389876555654321
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 262 ETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 262 ~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
..+|++|||++++++.+++++|.+++.++.
T Consensus 405 ~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 405 SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 359999999999999999999999998765
No 36
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=2.6e-35 Score=266.82 Aligned_cols=257 Identities=22% Similarity=0.225 Sum_probs=205.5
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTL 82 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 82 (309)
+|||++++++|++++.|++.+ .++++|.|+|++|||.|+ |++.+.+.+. ..++.+.+++. .+.+.+.. .+
T Consensus 99 ~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~~~~~--~~~~~i~~----~~ 169 (361)
T TIGR01883 99 ADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYCLDAP--GEVGNIQL----AA 169 (361)
T ss_pred ccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEEEeCC--CCcceEEe----cC
Confidence 556799999999999998865 578899999999999884 8888765432 34555554432 22233332 24
Q ss_pred cceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEec
Q 021680 83 AAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 83 ~g~~~~~i~~~G~~~Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
+|..+++|+++|+++|++ .|+.|+||+..++++|..|+... .+ ...+++++.++||...|+||++|++.+|+|.
T Consensus 170 ~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~---~~--~~~~~~i~~i~gG~~~nvVP~~~~~~~diR~ 244 (361)
T TIGR01883 170 PTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR---ID--EETTANIGSFSGGVNTNIVQDEQLIVAEARS 244 (361)
T ss_pred CceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC---CC--CccccccceeecCCccCccCCceEEEEEEec
Confidence 688999999999999986 59999999999999999886531 11 2367899999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHH
Q 021680 162 FSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF 239 (309)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~ 239 (309)
.+..+.+++.++|++.++..+...+.++++++. ..+++. +.++++++.+++++++ +|.++. ...+.|++|+++
T Consensus 245 ~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~lv~~l~~a~~~-~g~~~~--~~~~~g~tD~~~ 319 (361)
T TIGR01883 245 LSFRKAEAQVQTMRERFEQAAEKYGATLEEETR--LIYEGFKIHPQHPLMNIFKKAAKK-IGLKTS--EIFSGGGSDANV 319 (361)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEE--eccccccCCCCCHHHHHHHHHHHH-cCCCcE--EEecCcccHHHH
Confidence 999999999999999999887777777777653 234444 4467899999999988 487663 367789999999
Q ss_pred Hhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 021680 240 FAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 287 (309)
Q Consensus 240 ~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~ 287 (309)
|... +|++.+ ||+.. .+|++||+++++++.+++++|..++
T Consensus 320 ~~~~giP~v~~--G~g~~------~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 320 LNEKGVPTVNL--SAGYV------HAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred HhhCCCceEEE--CCCcc------cCcCcceeEEHHHHHHHHHHHHHHh
Confidence 9964 998875 55443 3999999999999999999999876
No 37
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.7e-35 Score=265.06 Aligned_cols=256 Identities=19% Similarity=0.153 Sum_probs=192.1
Q ss_pred ccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc--cHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccc
Q 021680 2 HACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG--GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPG 79 (309)
Q Consensus 2 h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g 79 (309)
-+|||||+++++++|+.. +.++|.|+|++|||.|+ |++.+++.+. +.|++++. +|++... .
T Consensus 99 Ga~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~~iv~-----Ept~~~~---~ 161 (364)
T PRK08737 99 GVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEAVLVA-----EPTMSEA---V 161 (364)
T ss_pred CcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCEEEEc-----CCCCcee---E
Confidence 379999999999999864 35789999999999874 8888888764 56888874 4554322 2
Q ss_pred ccccceeEEEEEEEcCCCCCCCC-CCCCCHHHHHHHHHHHHHHhh-ccc---CCCCCCeeEEEEEEecCCcCceecCeEE
Q 021680 80 PTLAAGGFFEAVINGKGGHAAIP-QHTIDPIVAASNVIVSLQHLV-SRE---ADPLDSQVLTVAKFEGGGAFNIIPDSVT 154 (309)
Q Consensus 80 ~~~~g~~~~~i~~~G~~~Hs~~p-~~g~NAi~~~~~~i~~l~~~~-~~~---~~~~~~~t~~i~~i~gg~~~n~vP~~~~ 154 (309)
..++|..|++|+++|+++|+|.| +.|.|||..++++|..+.+.. .+. .+.....++|++.|+||...|+||++|+
T Consensus 162 ~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~vg~i~GG~~~NvVP~~a~ 241 (364)
T PRK08737 162 LAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLRFNIGRVEGGIKANMIAPAAE 241 (364)
T ss_pred EecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCceEEeeEecCCCCCcCCCceE
Confidence 34679999999999999999997 699999999999998876543 111 1223356999999999999999999999
Q ss_pred EEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCcccc-CHHHHHHHHHHHHHhcCccccccCCCCCC
Q 021680 155 IGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN-NKNLHEHFQKVAADMLGVQNIKENRPLMG 233 (309)
Q Consensus 155 ~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 233 (309)
+.+|+|+.|+++.+++.++|+++++.. ...+++.+. ...+++... ..+++..+.+.+.+..|.+. . ...++
T Consensus 242 ~~~d~R~~p~~~~e~v~~~i~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~ 313 (364)
T PRK08737 242 LRFGFRPLPSMDVDGLLATFAGFAEPA----AATFEETFR-GPSLPSGDIARAEERRLAARDVADALDLPI--G-NAVDF 313 (364)
T ss_pred EEEEeeeCCCCCHHHHHHHHHHHHHHc----CCceEEEec-cCCCCCcccCcchHHHHHHHHHHhhhcCCC--C-ceecc
Confidence 999999999999999999998777541 223343332 233444432 23455555444444346543 1 34567
Q ss_pred CchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 021680 234 TEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATR 289 (309)
Q Consensus 234 ~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~ 289 (309)
+||+++|... +|++.+ ||+. ...+|++|||++++++.+++++|.+++.+
T Consensus 314 ~tDa~~~~~~Gip~v~~--GpG~-----~~~aHt~dE~i~i~~l~~~~~~~~~~~~~ 363 (364)
T PRK08737 314 WTEASLFSAAGYTALVY--GPGD-----IAQAHTADEFVTLDQLQRYAESVHRIIND 363 (364)
T ss_pred ccCHHHHHHcCCCEEEE--CCCC-----hhhccCCCcceeHHHHHHHHHHHHHHhcC
Confidence 8999999875 998775 6653 23599999999999999999999998753
No 38
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=8.8e-35 Score=266.93 Aligned_cols=261 Identities=18% Similarity=0.168 Sum_probs=207.1
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTL 82 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 82 (309)
|||||++|++|.|+++|++.+ .++++|.|+|++|||.| .|++.++.+++ ..|+++.+|.. +|... . ..+
T Consensus 137 ~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~~--~~~~i-~----~~~ 206 (404)
T PRK13381 137 ADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDCC--ELGEV-V----YEN 206 (404)
T ss_pred cccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHhcC--CCCEEEEecCC--CcceE-E----Eec
Confidence 999999999999999998874 56889999999999998 59998876654 36777776643 44332 2 225
Q ss_pred cceeEEEEEEEcCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEec
Q 021680 83 AAGGFFEAVINGKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 83 ~g~~~~~i~~~G~~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
+|..|++|+++|+++|++. |+.|.|||..+++++.+|+++..+........+++++.++++ |++|++.+|+|+
T Consensus 207 ~G~~~~~v~v~Gk~aHa~~~p~~g~NAI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~ 280 (404)
T PRK13381 207 FNAASAEITITGVTAHPMSAKGVLVNPILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRD 280 (404)
T ss_pred CcceEEEEEEEeEecCCCCCcccCcCHHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEec
Confidence 6899999999999999886 899999999999999999876433322223456888888774 899999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhC-CeeEEEEeccCCCC--ccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHH
Q 021680 162 FSKESIIQLKQRIEEVVMKQASVQR-CNATVTFDDKSFYP--VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 238 (309)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 238 (309)
.|.++.+++.++|++++++.+...+ +.+++++......+ .++.++++++.+++++++. |.++ ....+.|++|++
T Consensus 281 ~~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~--~~~~~~g~tDa~ 357 (404)
T PRK13381 281 FDLDGFEARKQFIEEVVAKINAKYPTARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEP--KVIPMRGGTDGA 357 (404)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCe--eeccCCccchHH
Confidence 9999999999999999999877665 56666543211111 2456889999999999874 7765 335678899999
Q ss_pred HHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 239 FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 239 ~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
+|.+. +|++++ ||+.. .+|++||||+++++.+++++|..++..+.
T Consensus 358 ~~~~~giP~v~~--GpG~~------~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 358 ALSAKGLPTPNL--FTGAH------NFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred HHhcCCCCeEEE--Ccccc------CCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 99865 999886 44433 29999999999999999999999998764
No 39
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=1.3e-34 Score=260.70 Aligned_cols=252 Identities=15% Similarity=0.160 Sum_probs=196.0
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
+|||||++++++.|+++| +.+++++|.|++++|||.|+ |...++.++. .+|++++.+ |++...+ ...
T Consensus 89 ~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~E-----pt~~~~i--~~~ 156 (348)
T PRK04443 89 SVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGE-----PSGWDGI--TLG 156 (348)
T ss_pred ccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeC-----CCCccce--eee
Confidence 589999999999999998 34789999999999999984 5555555554 578888754 4442111 234
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---cCCCCCCeeEEEEEEecCCcCceecCeEEEEEE
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR---EADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGT 158 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~---~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~d 158 (309)
++|..+++|+++|+++||+.| |.|||..|++++..|+++... ........++|++.|+ ...|+||++|++.+|
T Consensus 157 ~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~iP~~~~~~~d 232 (348)
T PRK04443 157 YKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDGLTVEAEMTVG 232 (348)
T ss_pred cccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCCCCceEEEEEE
Confidence 679999999999999999987 799999999999999886431 1122445788998888 356999999999999
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCc--cccCHHHHHHHHHHHHHhcCccccccCCCCCCCch
Q 021680 159 FRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTED 236 (309)
Q Consensus 159 iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD 236 (309)
+|++|.++.+++.++|++.+. + +++++. ..+|+ .+.++++++.++++++++++ ++ .....+|++|
T Consensus 233 ~R~~p~~~~~~i~~~i~~~~~------~--~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~--~~~~~~g~tD 299 (348)
T PRK04443 233 LRLPPGLSPEEAREILDALLP------T--GTVTFT--GAVPAYMVSKRTPLARAFRVAIREAGG-TP--RLKRKTGTSD 299 (348)
T ss_pred EccCCCCCHHHHHHHHHHhCC------C--cEEEEe--cCCCceecCCCCHHHHHHHHHHHHhcC-Cc--ceeccccCCc
Confidence 999999999999999999873 2 334432 12333 34577899999999999755 33 2345779999
Q ss_pred HHHHhh--hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021680 237 FSFFAE--AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 290 (309)
Q Consensus 237 ~~~~~~--~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~ 290 (309)
+++|.+ .+|++. +||++. ..+|++|||++++++.+++++|.+++.++
T Consensus 300 ~~~~~~~~gip~v~--~Gpg~~-----~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 300 MNVVAPAWGCPMVA--YGPGDS-----DLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred HHHHhhhcCCCEEE--ECCCCc-----cccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 999975 388775 576542 35899999999999999999999998653
No 40
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.1e-34 Score=266.42 Aligned_cols=264 Identities=17% Similarity=0.149 Sum_probs=202.1
Q ss_pred ccchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCccHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 2 HACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 2 h~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
++|||||++|++|+|++.|++.+..++++|.|+|++|||.|+|++.+..+++ +.++.+.++ ++|++.+...
T Consensus 139 ~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~---- 209 (410)
T TIGR01882 139 LGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYE---- 209 (410)
T ss_pred ecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEc----
Confidence 6799999999999999999886444689999999999999888888765443 345554443 3677765443
Q ss_pred ccceeEEEEEEEcCCCCCCCC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 82 LAAGGFFEAVINGKGGHAAIP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
..|..+++|+++|+++|++.+ +.+.|||..+.+++..|....... ..+-+++.+++| ..|.+|++|++.+|+|
T Consensus 210 ~~g~~~~~I~v~Gk~aHa~~~~~~g~nAi~~a~~~~~~l~~~~~~~-----~t~~~~g~i~~g-~i~giPd~a~l~~diR 283 (410)
T TIGR01882 210 TFSAAAAKITIQGNNVHPGTAKGKMINAAQIAIDLHNLLPEDDRPE-----YTEGREGFFHLL-SIDGTVEEAKLHYIIR 283 (410)
T ss_pred cccceEEEEEEEEEecCcccChHHHHHHHHHHHHHHHhcCCcCCCc-----cccceeEEEEEE-eEEEecCEEEEEEEEe
Confidence 247789999999999999985 689999999999887665431110 011122345554 3556999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCC-eeEEEEec-cCCC-CccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchH
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQRC-NATVTFDD-KSFY-PVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDF 237 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~v~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 237 (309)
+.+.++.++++++|++++++.+...+. .+++++.. ...+ +.+++++++++.++++++++ |.++ ......|++|+
T Consensus 284 ~~~~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~--~~~~~~ggtDa 360 (410)
T TIGR01882 284 DFEKENFQERKELMKRIVEKMNNEYGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEP--KISPIRGGTDG 360 (410)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHh-CCCC--cccccceechH
Confidence 999999999999999999998777663 45555432 1211 24567889999999999884 7765 33567899999
Q ss_pred HHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 238 SFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 238 ~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
++|... +|++.+ ||++. .+|++|||++++++.+++++|.+++..+.
T Consensus 361 ~~~~~~Gip~~~~--G~G~~------~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 361 SQLSYMGLPTPNI--FAGGE------NMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred HHHHhCCCCCCeE--cCCcc------cCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 999875 898765 55433 39999999999999999999999998775
No 41
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=8.6e-34 Score=257.34 Aligned_cols=251 Identities=20% Similarity=0.162 Sum_probs=187.5
Q ss_pred cchhhHHHHHHHHHHHHHHh--ccCCCCceEEEEEecCCCCC---ccHHHHHHcCC-CCCcceeEEecCCCCCCCceEEe
Q 021680 3 ACGHDAHVAMLLGAAKMLQV--FRHEIKGTIVLVFQPAEEGG---GGAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVAS 76 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~dEE~g---~G~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~ 76 (309)
+|||||+++++|+|+++|++ .+..++++|.|+|++|||++ .|+..+++... +...|++++.++ ++.. +
T Consensus 101 a~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ep-----t~~~-i 174 (373)
T TIGR01900 101 ATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLAADFAIIGEP-----TGGG-I 174 (373)
T ss_pred chhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCcccccCCEEEEECC-----CCCc-c
Confidence 36779999999999999953 35578999999999999985 38888887642 235688887543 3321 1
Q ss_pred cccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC--CC-CCCeeEEEEEEecCCcCceecCeE
Q 021680 77 RPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA--DP-LDSQVLTVAKFEGGGAFNIIPDSV 153 (309)
Q Consensus 77 ~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~--~~-~~~~t~~i~~i~gg~~~n~vP~~~ 153 (309)
...++|..+++|+++|+++|++.|+.|.|||..|+++|..|+++..... +. ....++|++.|+||...|+||++|
T Consensus 175 --~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~t~~v~~I~GG~~~nvVP~~a 252 (373)
T TIGR01900 175 --EAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYREGLNATFCEGGKANNVIPDEA 252 (373)
T ss_pred --cccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccceEEEEEEeCCCCCcccCCeE
Confidence 2336799999999999999999999999999999999999988643221 11 224789999999999999999999
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHH--------HHHHh---C-CeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcC
Q 021680 154 TIGGTFRAFSKESIIQLKQRIEEVVMK--------QASVQ---R-CNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG 221 (309)
Q Consensus 154 ~~~~diR~~~~~~~~~~~~~i~~~~~~--------~~~~~---~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 221 (309)
++.+|+|+.|+++.+++.+.|+++++. ..+.. + ..++++..........+.+.++.+.+.+++++++|
T Consensus 253 ~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 332 (373)
T TIGR01900 253 RMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMEDEAGGALPGLGAPLAQDLIDAVGEEKG 332 (373)
T ss_pred EEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEcccCCCCCCCCCCHHHHHHHHHHHhccC
Confidence 999999999999999999999766432 22111 1 12333332111111123467889999999999888
Q ss_pred ccccccCCCCCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCC
Q 021680 222 VQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVN 272 (309)
Q Consensus 222 ~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~ 272 (309)
.++. ...|+||+++|... +|++. +||++. .++|++||||+
T Consensus 333 ~~~~----~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~aH~~dE~v~ 373 (373)
T TIGR01900 333 RDPL----AKFGWTDVARFSALGIPALN--FGAGDP-----LFAHKHDEQCP 373 (373)
T ss_pred CCcc----cccCCccHHHHHhcCCCEEE--eCCCCh-----hhccCCCCCCC
Confidence 7652 26688999999864 89876 476543 35999999985
No 42
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=265.60 Aligned_cols=274 Identities=16% Similarity=0.132 Sum_probs=202.6
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcC--CCCCcceeEEecCCCCCCCceEEeccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAG--ALENVEAIFGLHVSSLFPVGTVASRPG 79 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~g 79 (309)
+|||||+++++++|+++|++.+..++++|.|++++|||.|+ |...++++. .+ ..|++++.+++...+... .+ .
T Consensus 118 ~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~-~~d~~ii~e~~~~~~~~~-~i--~ 193 (456)
T PRK08201 118 ASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFVEEEKDKL-AADVVLISDTTLLGPGKP-AI--C 193 (456)
T ss_pred cccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHHHhhHHhc-cCCEEEEeCCCcCCCCCE-EE--E
Confidence 58999999999999999987766788899999999999984 777777653 12 357888866543222221 11 3
Q ss_pred ccccceeEEEEEEEcCCC--CCCCCC-CCCCHHHHHHHHHHHHHHhhccc------------------------------
Q 021680 80 PTLAAGGFFEAVINGKGG--HAAIPQ-HTIDPIVAASNVIVSLQHLVSRE------------------------------ 126 (309)
Q Consensus 80 ~~~~g~~~~~i~~~G~~~--Hs~~p~-~g~NAi~~~~~~i~~l~~~~~~~------------------------------ 126 (309)
.+++|..|++|+++|+++ |++.|. .+.|||..|+++|.+|+++..+.
T Consensus 194 ~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (456)
T PRK08201 194 YGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKL 273 (456)
T ss_pred EecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHH
Confidence 446799999999999998 999865 45799999999999997532100
Q ss_pred -----CCC-------------CCCeeEEEEEEecCC----cCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHH
Q 021680 127 -----ADP-------------LDSQVLTVAKFEGGG----AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASV 184 (309)
Q Consensus 127 -----~~~-------------~~~~t~~i~~i~gg~----~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~ 184 (309)
... ...+|+|++.|+||. ..|+||++|++.+|+|+.|+++.+++.++|++.+++.. .
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~ 352 (456)
T PRK08201 274 KRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-P 352 (456)
T ss_pred HhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-C
Confidence 000 013589999999874 37999999999999999999999999999999987531 1
Q ss_pred hCCeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCCCCCc--hHHHHhhh-cCeeEEEeccCCCCCC
Q 021680 185 QRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTE--DFSFFAEA-IPGYFYYLGMNDETKG 259 (309)
Q Consensus 185 ~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~t--D~~~~~~~-~p~v~~~~G~~~~~~g 259 (309)
.+.++++.. ...++++ +.++++++++++++++++|.++. ....+++. |+.++... +|++.+ ||+..
T Consensus 353 ~~~~v~~~~--~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~gg~~~~~~~~~~~~gip~v~~--GpG~~--- 423 (456)
T PRK08201 353 AGVRVTIRR--FDKGPAFVAPIDHPAIQAAARAYEAVYGTEAA--FTRMGGSIPVVETFSSQLHIPIVLM--GFGLP--- 423 (456)
T ss_pred CCeEEEEEE--CCCcCceecCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHHHHHHHHHHhCCCEEEe--cCCCC---
Confidence 233344432 2233433 45778999999999999887653 23333332 66666543 898765 55532
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 260 KFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 260 ~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
...+|++|||++++++.+++++|..++.++.
T Consensus 424 -~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 424 -SENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred -CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 1349999999999999999999999998874
No 43
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=6e-34 Score=265.01 Aligned_cols=265 Identities=15% Similarity=0.054 Sum_probs=198.0
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCC----CCCCceEEec
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSS----LFPVGTVASR 77 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~~~ 77 (309)
+||+||++++++.|+++|++.+..++++|.|+|++|||+|+ |++++++.+. ..|+++..+... +++... .+.
T Consensus 115 ~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~--~~d~~~~~d~~~~~~~ge~g~~-~~~ 191 (466)
T TIGR01886 115 ASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYFKHEE--TPDFGFSPDAEFPIINGEKGNF-TLE 191 (466)
T ss_pred ccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHHhcCc--CCCEEEECCCCceeEEEecceE-EEE
Confidence 58999999999999999999998999999999999999984 9999988754 245554322110 011111 000
Q ss_pred ---------------------------------cc-------------cccccee---------EEEEEEEcCCCCCCCC
Q 021680 78 ---------------------------------PG-------------PTLAAGG---------FFEAVINGKGGHAAIP 102 (309)
Q Consensus 78 ---------------------------------~g-------------~~~~g~~---------~~~i~~~G~~~Hs~~p 102 (309)
.+ ..++|.. |++|+++|+++|+|.|
T Consensus 192 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P 271 (466)
T TIGR01886 192 LSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLADKASLDGSFEINDESATIVLIGKGAHGAAP 271 (466)
T ss_pred EEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCC
Confidence 00 0133433 7999999999999999
Q ss_pred CCCCCHHHHHHHHHHHH-------------HHhhc-----------ccCCCCCCeeEEEEEEecCCcCceecCeEEEEEE
Q 021680 103 QHTIDPIVAASNVIVSL-------------QHLVS-----------READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGT 158 (309)
Q Consensus 103 ~~g~NAi~~~~~~i~~l-------------~~~~~-----------~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~d 158 (309)
+.|+|||..|+++|..+ .++.. ...+.+...++|++.|+||.. | ++|++.+|
T Consensus 272 ~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD 347 (466)
T TIGR01886 272 QVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGIAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLN 347 (466)
T ss_pred CCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCCcccccCcCceEEEeEEEEEecC-C---ceEEEEEE
Confidence 99999999999988873 22110 011235578999999999965 3 79999999
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec--cCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCch
Q 021680 159 FRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTED 236 (309)
Q Consensus 159 iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD 236 (309)
+|++|+++.+++.++|++.++. . +++++.. ..++ ..+.++++++.+.+++++++|.++ .....+|+||
T Consensus 348 ~R~~Pge~~eev~~eI~~~i~~-----~--~~v~~~~~~~~P~-~~~~ds~lv~~l~~a~~~v~G~~~--~~~~~~ggTD 417 (466)
T TIGR01886 348 FRYPQGTSPETMQKQVLDKFGG-----I--VDVTYNGHFEEPH-YVPGSDPLVQTLLKVYEKHTGKKG--HEVIIGGGTY 417 (466)
T ss_pred EecCCCCCHHHHHHHHHHHHhc-----c--cEEEEecccCCCc-ccCCCCHHHHHHHHHHHHHhCCCC--ceeeecCccH
Confidence 9999999999999999998863 1 2333311 1222 134467899999999999988765 3367899999
Q ss_pred HHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 237 FSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 237 ~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
+++|...+|... +||+ ....+|++||||+++++.+++++|++++.+||
T Consensus 418 a~~~~~~i~~gv--~gPG-----~~~~aH~~dE~V~i~el~~a~~iy~~~i~~l~ 465 (466)
T TIGR01886 418 GRLLERGVAYGA--MFEG-----GPDVMHQANEFMMLDDLILAAAIYAEAIYELA 465 (466)
T ss_pred HHhccccccccc--ccCC-----CCCCccCCCcceEHHHHHHHHHHHHHHHHHHh
Confidence 999986665433 3443 34569999999999999999999999999987
No 44
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=262.66 Aligned_cols=269 Identities=16% Similarity=0.135 Sum_probs=195.8
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc--cHHHHHHcC--CCCCcceeEEecCCC-----CCCCce
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG--GAKKMLDAG--ALENVEAIFGLHVSS-----LFPVGT 73 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~~--~~~~~d~~~~~~~~~-----~~~~~~ 73 (309)
+|||||+++++|+|+++|++.+..++++|.|+|++|||+|+ |++.+++.. .++..++++. +++. ..+...
T Consensus 103 ~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~~~ii~-e~~~~~~~~~~~~~~ 181 (426)
T PRK07906 103 AVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEGVTEAIS-EVGGFSLTVPGRDRL 181 (426)
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccchheEEE-CCCceeeccCCCccE
Confidence 47899999999999999999888899999999999999973 888887653 2333333432 2211 011111
Q ss_pred EEecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc--------------------CCCC---
Q 021680 74 VASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE--------------------ADPL--- 130 (309)
Q Consensus 74 ~~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~--------------------~~~~--- 130 (309)
..+ ...++|..+++|+++|+++|++.|+. .|||..++++|.+|+++..+. .++.
T Consensus 182 ~~i--~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (426)
T PRK07906 182 YLI--ETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPD 258 (426)
T ss_pred EEE--EeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHH
Confidence 122 34467999999999999999999875 999999999999997542110 0000
Q ss_pred ----------------CCeeEEEEEEecCCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEe
Q 021680 131 ----------------DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFD 194 (309)
Q Consensus 131 ----------------~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 194 (309)
..+++|++.|+||...|+||++|++.+|+|+.|+++ +++.+.|++++. .++++++.
T Consensus 259 ~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~~~~~-------~~v~~~~~ 330 (426)
T PRK07906 259 ALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVDELLG-------PDVEREWV 330 (426)
T ss_pred HHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHHHHHhC-------CCeEEEEe
Confidence 146999999999999999999999999999999876 566666666542 24555543
Q ss_pred ccCCCCc--cccCHHHHHHHHHHHHHhcC-ccccccCCCCCCCchHHHHhhh-cCeeEEEeccCCCCCC--CCCCCCCCC
Q 021680 195 DKSFYPV--TVNNKNLHEHFQKVAADMLG-VQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKG--KFETGHSPY 268 (309)
Q Consensus 195 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g--~~~~~H~~d 268 (309)
. .+++ .+.++++++.++++++++++ ..+ .+....|+||+++|... +|++. +||+...+| ....+|++|
T Consensus 331 ~--~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~--~~~~~~ggtDa~~~~~~g~p~~~--~gp~~~~~~~~~~~~~H~~~ 404 (426)
T PRK07906 331 H--RDPALETPFDGPLVDAMNAALLAEDPGARV--VPYMLSGGTDAKAFSRLGIRCYG--FAPLRLPPDLDFAALFHGVD 404 (426)
T ss_pred c--CCCCCCCCCCcHHHHHHHHHHHHHCCCCeE--eeeeecccCcHHHHHhcCCceEE--EeccccCccccccccCcCCC
Confidence 2 2333 34578899999999998753 222 23456778999999875 77654 466431100 013599999
Q ss_pred CCCCCCchHHHHHHHHHHHHH
Q 021680 269 FRVNEDALPYGAALHASLATR 289 (309)
Q Consensus 269 E~v~i~~~~~~~~i~~~~~~~ 289 (309)
||++++++.+++++|+.++..
T Consensus 405 E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 405 ERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred CceeHHHHHHHHHHHHHHHHh
Confidence 999999999999999999865
No 45
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.4e-33 Score=263.15 Aligned_cols=274 Identities=15% Similarity=0.186 Sum_probs=205.1
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCC-CCCcceeEEecCCCCCCC-ceEEeccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGA-LENVEAIFGLHVSSLFPV-GTVASRPG 79 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~-~~~~d~~~~~~~~~~~~~-~~~~~~~g 79 (309)
+|||||+++++++|+++|++.+..++++|.|+|++|||+|+ |...++.+.. .-..|++++.++....+. ..+ .
T Consensus 126 ~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i----~ 201 (464)
T PRK09104 126 ASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAI----T 201 (464)
T ss_pred ccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEE----E
Confidence 48999999999999999999877788999999999999984 6666665421 114688888664321111 122 2
Q ss_pred ccccceeEEEEEEEc--CCCCCCC-CCCCCCHHHHHHHHHHHHHHhhccc------------------------------
Q 021680 80 PTLAAGGFFEAVING--KGGHAAI-PQHTIDPIVAASNVIVSLQHLVSRE------------------------------ 126 (309)
Q Consensus 80 ~~~~g~~~~~i~~~G--~~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~~------------------------------ 126 (309)
.+++|..|++|+++| +++|++. |+.|.||+..|+++|.+|++...+.
T Consensus 202 ~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (464)
T PRK09104 202 TSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAF 281 (464)
T ss_pred eecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHH
Confidence 346799999999999 6899997 7899999999999999987631100
Q ss_pred ------CCC------------CCCeeEEEEEEecCC----cCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHH
Q 021680 127 ------ADP------------LDSQVLTVAKFEGGG----AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASV 184 (309)
Q Consensus 127 ------~~~------------~~~~t~~i~~i~gg~----~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~ 184 (309)
..+ ...+++|++.|+||. ..|+||++|++.+|+|++|+++.+++.+.|++.+++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~--- 358 (464)
T PRK09104 282 LGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRAR--- 358 (464)
T ss_pred HHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHh---
Confidence 000 124689999999985 4699999999999999999999999999999999752
Q ss_pred hCCeeEEEEeccCCCCc--cccCHHHHHHHHHHHHHhcCccccccCCCCCCCc-hHHHHhh--hcCeeEEEeccCCCCCC
Q 021680 185 QRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTE-DFSFFAE--AIPGYFYYLGMNDETKG 259 (309)
Q Consensus 185 ~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~t-D~~~~~~--~~p~v~~~~G~~~~~~g 259 (309)
....+++++......|+ .+.++++++.+.+++++.+|.++. ....+|++ |++.|.+ .+|++.+++|+..
T Consensus 359 ~~~~~~v~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~gip~v~~g~G~~~---- 432 (464)
T PRK09104 359 LPADCSVEFHDHGGSPAIALPYDSPALAAAKAALSDEWGKPAV--LIGSGGSIPIVGDFKRILGMDSLLVGFGLDD---- 432 (464)
T ss_pred CCCCeEEEEEecCCCCceECCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHHHHHHHHHHhCCCEEEecCCCCC----
Confidence 12234444432222333 456788999999999998887664 24444444 4677665 3888766444332
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 260 KFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 260 ~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
..+|++|||++++++.+++++|++++..++
T Consensus 433 --~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 433 --DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred --CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 249999999999999999999999999886
No 46
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=5.8e-33 Score=254.48 Aligned_cols=270 Identities=19% Similarity=0.202 Sum_probs=208.1
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCC-----C-ccHHHHHHcCC------C------------------
Q 021680 5 GHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-----G-GGAKKMLDAGA------L------------------ 54 (309)
Q Consensus 5 g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-----g-~G~~~~~~~~~------~------------------ 54 (309)
+.+.|++++|+++++|++.+.+++++|.|++++|||. + .|++.++.... +
T Consensus 86 dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~ 165 (401)
T TIGR01879 86 DGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPD 165 (401)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCC
Confidence 3457899999999999999999999999999999997 3 37777653210 0
Q ss_pred ---------CCcceeEEecCCCCC---CCce-EEecccccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHHHHHHH
Q 021680 55 ---------ENVEAIFGLHVSSLF---PVGT-VASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASNVIVSL 119 (309)
Q Consensus 55 ---------~~~d~~~~~~~~~~~---~~~~-~~~~~g~~~~g~~~~~i~~~G~~~Hs~~-p~-~g~NAi~~~~~~i~~l 119 (309)
.+.++.+.+|..++. +.+. +.+ ...++|..|++|+++|+++|++. |+ .|.||+..+++++..|
T Consensus 166 ~~~~~~~~~~~~~~~~e~Hieqg~~l~~~g~~~~v--~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l 243 (401)
T TIGR01879 166 LPNQPLRPRGDIKAYVELHIEQGPVLESNGQPIGV--VNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQV 243 (401)
T ss_pred cccccccccccccEEEEEEEcCCcChhhCCCeEEE--EEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHH
Confidence 012234444443321 1111 112 23467999999999999999987 53 6899999999999999
Q ss_pred HHhhcccCCCCCCeeEEEEEEecC-CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCC
Q 021680 120 QHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF 198 (309)
Q Consensus 120 ~~~~~~~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~ 198 (309)
+++..+.. .+.+.+++.|++| ...|+||++|++.+|+|+.|+++.++++++|+++++..+...+.+++++.. ..
T Consensus 244 ~~l~~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~~--~~ 318 (401)
T TIGR01879 244 EEKAKRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIERW--MD 318 (401)
T ss_pred HHHHHhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEEe--ec
Confidence 98754321 2357899999986 678999999999999999999999999999999999887666777777653 44
Q ss_pred CCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 021680 199 YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 278 (309)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~ 278 (309)
++++..++++++.++++++++ |.++. ...++|+||+++|.+..|..+ .+||+.. ..+|++|||++++++.+
T Consensus 319 ~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fgPg~~-----~~aH~~dE~v~~e~l~~ 389 (401)
T TIGR01879 319 EEPVPCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFIPSIN-----GISHNPAEWSNITDCAE 389 (401)
T ss_pred CCCcCCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEecCCC-----CCcCCCCccCCHHHHHH
Confidence 677778999999999999875 76653 356789999999987754333 3566543 24899999999999999
Q ss_pred HHHHHHHHHHHH
Q 021680 279 GAALHASLATRY 290 (309)
Q Consensus 279 ~~~i~~~~~~~~ 290 (309)
++++|+.++.++
T Consensus 390 ~~~vl~~~i~~l 401 (401)
T TIGR01879 390 GAKVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 47
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.4e-33 Score=254.63 Aligned_cols=251 Identities=20% Similarity=0.205 Sum_probs=193.5
Q ss_pred ccchh---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC---ccHHHHHHcC-CCCCcceeEEecCCCCCCCceE
Q 021680 2 HACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG---GGAKKMLDAG-ALENVEAIFGLHVSSLFPVGTV 74 (309)
Q Consensus 2 h~~g~---~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g---~G~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~ 74 (309)
|+||+ |+++|++|+|+++|. +++++|.++|++|||.+ .|++.+++.. .+.++|++++.++.. ..+
T Consensus 89 ~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~~----~~i 160 (352)
T PRK13007 89 YGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEPTD----GVI 160 (352)
T ss_pred EccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecCCC----Cce
Confidence 56666 799999999999983 47889999999999986 3788887653 234578888865422 122
Q ss_pred EecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC---CCCCeeEEEEEEecCCcCceecC
Q 021680 75 ASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD---PLDSQVLTVAKFEGGGAFNIIPD 151 (309)
Q Consensus 75 ~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~---~~~~~t~~i~~i~gg~~~n~vP~ 151 (309)
. ..++|..+++|+++|+++|++.|+.|.||+..++++|.+|+++..+... ...+.+++++.|+||...|+||+
T Consensus 161 ~----~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~nviP~ 236 (352)
T PRK13007 161 E----AGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGGVAGNVIPD 236 (352)
T ss_pred E----eeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecCCcCccCCC
Confidence 1 2356999999999999999999999999999999999999886433211 11245899999999999999999
Q ss_pred eEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec-cCCCCccccCHHHHHHHHHHHHHhcCccccccCCC
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRP 230 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 230 (309)
+|++.+|+|++|.++.+++.++|+++++... ++++.. .++++ ...++++++.+.++ +|.++ ..
T Consensus 237 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~----~g~~~----~~ 300 (352)
T PRK13007 237 ECVVNVNYRFAPDRSLEEALAHVREVFDGFA-------EVEVTDLAPGAR-PGLDHPAAAALVAA----VGGEV----RA 300 (352)
T ss_pred eEEEEEEEeeCCCCCHHHHHHHHHHHhcccc-------EEEeecccCCCC-CCCCCHHHHHHHHH----hCCCC----cc
Confidence 9999999999999999999999998886431 343321 23332 23466777777765 35443 23
Q ss_pred CCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 021680 231 LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 287 (309)
Q Consensus 231 ~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~ 287 (309)
..|++|++++... +|++. +||+.. ..+|++|||++++++.+++++|+.++
T Consensus 301 ~~g~td~~~~~~~Gip~v~--~Gpg~~-----~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 301 KYGWTDVARFSALGIPAVN--FGPGDP-----ALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred ccccchHHHHHhCCCCEEE--eCCCch-----hhccCCCCceEHHHHHHHHHHHHHHh
Confidence 5688999999875 99776 466442 35999999999999999999999876
No 48
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=1.3e-32 Score=251.76 Aligned_cols=270 Identities=17% Similarity=0.157 Sum_probs=212.3
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc------cHHHHHH------------------------cCC---
Q 021680 7 DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG------GAKKMLD------------------------AGA--- 53 (309)
Q Consensus 7 ~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~------G~~~~~~------------------------~~~--- 53 (309)
..|+++.|++++.|++.+.+++++|.+++.++||.+. |++.+.- .|+
T Consensus 90 ~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~ 169 (406)
T TIGR03176 90 QFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLR 169 (406)
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCcc
Confidence 5789999999999999999999999999999999851 6655541 011
Q ss_pred -----CCCcceeEEecCCCCCC---Cc-eEEecccccccceeEEEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHHHh
Q 021680 54 -----LENVEAIFGLHVSSLFP---VG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQH--TIDPIVAASNVIVSLQHL 122 (309)
Q Consensus 54 -----~~~~d~~~~~~~~~~~~---~~-~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~--g~NAi~~~~~~i~~l~~~ 122 (309)
..++++.+.+|..++.- .+ .+.+. ..++|..+++|+++|+++|++.|.. +.||+..+++++..+.++
T Consensus 170 ~~~~~~~~~~~~~elHieqG~~Le~~g~~igiv--~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~ 247 (406)
T TIGR03176 170 KAPTVRDDIKAFVELHIEQGCVLESEGQSIGVV--NAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIER 247 (406)
T ss_pred cccccccccceEEEEEECCCcchHHCCCeEEEE--eecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 11456778888754311 11 12222 3356999999999999999998554 489999999999999886
Q ss_pred hcccCCCCCCeeEEEEEEec-CCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCc
Q 021680 123 VSREADPLDSQVLTVAKFEG-GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV 201 (309)
Q Consensus 123 ~~~~~~~~~~~t~~i~~i~g-g~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~ 201 (309)
..+. ..+.++|++.|++ |...|+||++|++.+|+|..+.++.+++.++|++.+++++...+++++++.. .. .++
T Consensus 248 ~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~-~~-~~p 322 (406)
T TIGR03176 248 AKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDLW-MD-EAP 322 (406)
T ss_pred HHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEE-ec-CCC
Confidence 4322 2346899999994 6889999999999999999999999999999999999998888888777642 22 234
Q ss_pred cccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 021680 202 TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAA 281 (309)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~ 281 (309)
...|+++++.+++++++. +.+. ....++|++|+++|.+.+|+++. +||+..+ .+|++||+++++++.++++
T Consensus 323 ~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~i-fgp~~~g-----~~H~p~E~v~~e~l~~g~~ 393 (406)
T TIGR03176 323 VPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMI-FVPSIGG-----ISHNPAERTNIEDLVEGVK 393 (406)
T ss_pred CCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEE-EEeCCCC-----CCCCccccCCHHHHHHHHH
Confidence 556889999999999986 4333 33677899999999988998665 4444321 3899999999999999999
Q ss_pred HHHHHHHHHHh
Q 021680 282 LHASLATRYLL 292 (309)
Q Consensus 282 i~~~~~~~~~~ 292 (309)
+|+.++.+++.
T Consensus 394 vl~~~l~~l~~ 404 (406)
T TIGR03176 394 TLADMLYELAY 404 (406)
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 49
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=6.8e-33 Score=258.82 Aligned_cols=276 Identities=15% Similarity=0.087 Sum_probs=204.7
Q ss_pred cchhhHHHHHHHHHHHHHHhc-cCCCCceEEEEEecCCCCCc-cHHHHHHcCC-CCCcceeEEecCCCCCCCceEEeccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVF-RHEIKGTIVLVFQPAEEGGG-GAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPG 79 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~g 79 (309)
+|||||+++++++|+++|++. +..++++|.|++++|||+|+ |+++++++.. .-..|++++.++....+..- .+ .
T Consensus 125 a~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~~-~i--~ 201 (469)
T PRK07079 125 TADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEEIGSPGLAEVCRQHREALAADVLIASDGPRLSAERP-TL--F 201 (469)
T ss_pred ccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCCe-EE--E
Confidence 589999999999999998754 47889999999999999985 9999988642 11368888865432112211 11 2
Q ss_pred ccccceeEEEEEEEcC--CCCCCC-CCCCCCHHHHHHHHHHHHHHhhccc------------------------C-----
Q 021680 80 PTLAAGGFFEAVINGK--GGHAAI-PQHTIDPIVAASNVIVSLQHLVSRE------------------------A----- 127 (309)
Q Consensus 80 ~~~~g~~~~~i~~~G~--~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~~------------------------~----- 127 (309)
..++|..|++|+++|+ +.||+. ...+.||+..++++|.++.+...+. .
T Consensus 202 ~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (469)
T PRK07079 202 LGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDP 281 (469)
T ss_pred EecceEEEEEEEEeeCCCCCCCCccccccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhcc
Confidence 3467999999999997 456664 2334799999999999985421000 0
Q ss_pred ---------------CCCCCeeEEEEEEecCC---cCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCee
Q 021680 128 ---------------DPLDSQVLTVAKFEGGG---AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNA 189 (309)
Q Consensus 128 ---------------~~~~~~t~~i~~i~gg~---~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 189 (309)
.....+++|++.|+||. ..|+||++|++.+|+|++|+++.+++.++|++++++.. ...+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~---~~~v 358 (469)
T PRK07079 282 AIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHG---FPMV 358 (469)
T ss_pred CcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC---CCCe
Confidence 00123589999999993 68999999999999999999999999999999997531 1134
Q ss_pred EEEEeccCCCCc--cccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhh--hcCeeEEEeccCCCCCCCCCCCC
Q 021680 190 TVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE--AIPGYFYYLGMNDETKGKFETGH 265 (309)
Q Consensus 190 ~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~v~~~~G~~~~~~g~~~~~H 265 (309)
++++. ..+++ .+.++++++.+++++++++|.++.. ....+|++|+++|.+ .+|++. +|++.+ + ..+|
T Consensus 359 ~~~~~--~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~~giP~v~--~g~~~~--~--~~~H 429 (469)
T PRK07079 359 EVTVE--RGSPATRLDPDDPWVRWALASIARTTGKKPAL-LPNLGGSLPNDVFADILGLPTLW--VPHSYP--A--CSQH 429 (469)
T ss_pred EEEEe--CCCCceecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCcchhHHHHHHHhCCCEEE--ecCCCC--C--ccCc
Confidence 55543 23333 3457789999999999988876531 234567789988875 389874 354432 2 1379
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 021680 266 SPYFRVNEDALPYGAALHASLATRYLLE 293 (309)
Q Consensus 266 ~~dE~v~i~~~~~~~~i~~~~~~~~~~~ 293 (309)
++||||+++++.+++++|.+++.+++.+
T Consensus 430 ~~dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 430 APNEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999865
No 50
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=4.9e-33 Score=249.44 Aligned_cols=251 Identities=13% Similarity=0.122 Sum_probs=192.2
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
+|||||+++++++|+++|++. ..+|.|++++|||+|+ |++++++... .+++++.+ |++.-.+ ..+
T Consensus 80 ~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~e-----pt~~~~i--~~~ 145 (336)
T TIGR01902 80 AVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGE-----PSGAEGI--TLG 145 (336)
T ss_pred ccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEec-----CCCCcce--eee
Confidence 589999999999999999764 3589999999999984 9998887743 24666644 3432111 234
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEec
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
++|..+++++++|+++|++.|+ ||+..+.++++.|.+..... ......+++++.++||...|+||++|++.+|+|+
T Consensus 146 ~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~gg~~~nvIP~~a~~~idiR~ 221 (336)
T TIGR01902 146 YKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP-ENYDKPSIVPTIIRFGESYNDTPAKLELHFDLRY 221 (336)
T ss_pred eeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc-cCCCCCcceeEEEEccCCCcCCCceEEEEEEEee
Confidence 6799999999999999999875 48999999999987432111 1122357889999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHH
Q 021680 162 FSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF 239 (309)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~ 239 (309)
.|+++.+++.++|++ . ..++++.. ..+++. +.++++++.++++++++ +.++ ......|++|+++
T Consensus 222 ~p~~~~~~~~~~i~~-------~--~~~~~~~~--~~~~p~~~~~~~~lv~~~~~a~~~~-~~~~--~~~~~~g~tD~~~ 287 (336)
T TIGR01902 222 PPNNKPEEAIKEITD-------K--FPICLEIV--DETPPYKVSRNNPLVRAFVRAIRKQ-GMKP--RLKKKTGTSDMNI 287 (336)
T ss_pred CCCCCHHHHHHHHHh-------c--cCceEEEE--eccCceecCCCCHHHHHHHHHHHHc-CCCe--EEeeccccCccce
Confidence 999999998887776 1 12334332 223333 45778999999999986 5554 2345668899999
Q ss_pred Hhhh--cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 240 FAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 240 ~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
|.+. +|++. +||+.. ..+|++|||++++++.+++++|.+++..+++
T Consensus 288 ~~~~~g~p~v~--~Gpg~~-----~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~ 335 (336)
T TIGR01902 288 LAPIWTVPMVA--YGPGDS-----TLDHTPQEKISLAEYLIGIKTLMLAIEELWQ 335 (336)
T ss_pred eccccCCCeEE--ECCCCc-----ccCCCCcceeEHHHHHHHHHHHHHHHHHHhc
Confidence 9864 67664 576543 2489999999999999999999999998874
No 51
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-32 Score=250.17 Aligned_cols=278 Identities=23% Similarity=0.254 Sum_probs=206.3
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCC---CCCcceeEEecCCCCCCCceEEecc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGA---LENVEAIFGLHVSSLFPVGTVASRP 78 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~ 78 (309)
+||+||++++++.|++.+.+.+..++++|.+++++|||+|+ ++..+..++. ...+|+++..++....+.+.....
T Consensus 114 ~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~d~~i~~E~~~~~~~~~~~~~- 192 (409)
T COG0624 114 AADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRPDYEIVGEPTLESEGGDIIVV- 192 (409)
T ss_pred ccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCCCEEEeCCCCCcccCCCeEEE-
Confidence 58999999999999999999888999999999999999995 7777766653 235788887665211122332222
Q ss_pred cccccceeEEEEEEEcCCCCCCC--CCCCCCHHHHHHHHHHHHHHhhcccC-CCCC-CeeEEEEEEecCCc--------C
Q 021680 79 GPTLAAGGFFEAVINGKGGHAAI--PQHTIDPIVAASNVIVSLQHLVSREA-DPLD-SQVLTVAKFEGGGA--------F 146 (309)
Q Consensus 79 g~~~~g~~~~~i~~~G~~~Hs~~--p~~g~NAi~~~~~~i~~l~~~~~~~~-~~~~-~~t~~i~~i~gg~~--------~ 146 (309)
.++|..+++|+++|+++|+|. |+.+.|++..+...+.++.....+.. .... +.+++++.+.++.. .
T Consensus 193 --~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (409)
T COG0624 193 --GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDGPLGLNVGLILAGPGASVNGGDKV 270 (409)
T ss_pred --cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccCCccccccccccCCcccccCCccC
Confidence 367999999999999999999 99999955444444444433322111 1122 46667766666544 5
Q ss_pred ceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccc
Q 021680 147 NIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIK 226 (309)
Q Consensus 147 n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 226 (309)
|+||++|++.+|+|+.|..+.+++.++|++.++......++.+++.........+.+.++++++.+.+++++.+|.+.
T Consensus 271 nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~-- 348 (409)
T COG0624 271 NVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPGLGEPPLPVPGDSPLVAALAEAAEELLGLPP-- 348 (409)
T ss_pred ceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccccCCccccCCCchHHHHHHHHHHHHhhCCCc--
Confidence 999999999999999999999999999999998765433444444421122333456678899999999999878763
Q ss_pred cCCCCCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 227 ENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 227 ~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
.....++++|+.++... +| +..+||+.. ..+|++|||++++++.+++++|++++.+++.
T Consensus 349 ~~~~~G~~~da~~~~~~~~~--~~~fgp~~~-----~~~H~~~E~v~i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 349 EVSTGGGTHDARFFARLGIP--AVIFGPGDI-----GLAHQPNEYVELEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred eecCCCCcchHHHHHhcCCe--eEEECCCCc-----ccccCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 33555577999999886 57 334677653 3599999999999999999999999999874
No 52
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=5.9e-32 Score=251.32 Aligned_cols=272 Identities=17% Similarity=0.173 Sum_probs=201.0
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCC-CCCcceeEEecCCCCCCCceEEecccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGP 80 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~g~ 80 (309)
+|||||++++++.|+++| +..++++|.|++++|||+| .|++++++... .-+.|++++.+++... .+.-.+ ..
T Consensus 122 ~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~-~~~p~i--~~ 195 (449)
T PRK07907 122 AADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSLERLLAEHPDLLAADVIVIADSGNWS-VGVPAL--TT 195 (449)
T ss_pred ccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccHHHHHHhchHhhcCCEEEEecCCcCC-CCCeEE--EE
Confidence 589999999999999998 3467789999999999998 48888887531 1246888886653221 111111 23
Q ss_pred cccceeEEEEEEE--cCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhccc-------CCC---------------------
Q 021680 81 TLAAGGFFEAVIN--GKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSRE-------ADP--------------------- 129 (309)
Q Consensus 81 ~~~g~~~~~i~~~--G~~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~~-------~~~--------------------- 129 (309)
.++|..|++++++ |+++|++. +..+.||+..++++|.+|++...+. ...
T Consensus 196 ~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (449)
T PRK07907 196 SLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGV 275 (449)
T ss_pred ecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcc
Confidence 3679999999998 89999998 4678999999999999997642210 000
Q ss_pred ------------CCCeeEEEEEEec---CCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEe
Q 021680 130 ------------LDSQVLTVAKFEG---GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFD 194 (309)
Q Consensus 130 ------------~~~~t~~i~~i~g---g~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 194 (309)
...++++++.|++ |...|+||++|++++|+|+.|+++.+++.+.|++.++... ..+.++++++.
T Consensus 276 ~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~diR~~p~~~~e~v~~~l~~~l~~~~-~~~~~~~~~~~ 354 (449)
T PRK07907 276 ELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLSLRVAPGQDAAEAQDALVAHLEAHA-PWGAHVTVERG 354 (449)
T ss_pred cccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEEC
Confidence 1256899999986 4688999999999999999999999999999999987531 22445555542
Q ss_pred ccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCCCCCch-HHHHhhh---cCeeEEEeccCCCCCCCCCCCCCCC
Q 021680 195 DKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTED-FSFFAEA---IPGYFYYLGMNDETKGKFETGHSPY 268 (309)
Q Consensus 195 ~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD-~~~~~~~---~p~v~~~~G~~~~~~g~~~~~H~~d 268 (309)
..++++ +.++++++.+++++++.+|.++. ....+|+++ .+.|.+. +|++. +||++.+ ..+|++|
T Consensus 355 --~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~~~~~~~~~~~~~~~~~v~--~Gpg~~~----~~aH~~n 424 (449)
T PRK07907 355 --DAGQPFAADASGPAYDAARAAMREAWGKDPV--DMGMGGSIPFIAELQEAFPQAEILV--TGVEDPK----TRAHSPN 424 (449)
T ss_pred --CCcCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHHHHHHHHHhcCCCcEEE--eccCCCC----CCCcCCC
Confidence 223333 45788999999999999998763 345555544 2344433 45444 5765421 3599999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHH
Q 021680 269 FRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 269 E~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
||++++++.+++++|++++..|.
T Consensus 425 E~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 425 ESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999874
No 53
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=8.4e-32 Score=253.69 Aligned_cols=271 Identities=14% Similarity=0.115 Sum_probs=200.0
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCC----CCCCCc-----
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVS----SLFPVG----- 72 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~----~~~~~~----- 72 (309)
+|||||+++++++|++.|++.+.+++++|.|+|++|||.|+ |+++++..+.. .++.+.++.. ..+|+.
T Consensus 152 ~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i 229 (520)
T PRK06156 152 TEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMA 229 (520)
T ss_pred cccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEE
Confidence 58999999999999999998888888999999999999985 99988876542 2333322100 001110
Q ss_pred ------------------------------eEEeccc-----------------cccccee---------EEEEEEEcCC
Q 021680 73 ------------------------------TVASRPG-----------------PTLAAGG---------FFEAVINGKG 96 (309)
Q Consensus 73 ------------------------------~~~~~~g-----------------~~~~g~~---------~~~i~~~G~~ 96 (309)
...+... ..++|.. |++|+++|++
T Consensus 230 ~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~ 309 (520)
T PRK06156 230 TFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKS 309 (520)
T ss_pred EecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEE
Confidence 0000000 0011333 8999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhhcc---------------------------cCCCCCCeeEEEEEEecCCcCcee
Q 021680 97 GHAAIPQHTIDPIVAASNVIVSLQHLVSR---------------------------EADPLDSQVLTVAKFEGGGAFNII 149 (309)
Q Consensus 97 ~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~---------------------------~~~~~~~~t~~i~~i~gg~~~n~v 149 (309)
+|++.|+.|.|||..++++|..|++.... ..+..+..+++++.|++|.
T Consensus 310 aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~----- 384 (520)
T PRK06156 310 AHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD----- 384 (520)
T ss_pred CCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcEEeeeEEEEeC-----
Confidence 99999999999999999999999752110 0112345678888888875
Q ss_pred cCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCc-cccCHHHHHHHHHHHHHhcCccccccC
Q 021680 150 PDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV-TVNNKNLHEHFQKVAADMLGVQNIKEN 228 (309)
Q Consensus 150 P~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~ 228 (309)
+.|++.+|+|++|+++.++++++|++.+++.....+.++++... ...|. .+.++++++.+++++++++|.++ .+
T Consensus 385 -~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~--~~~p~~~~~d~~lv~~l~~a~~~~~G~~~--~~ 459 (520)
T PRK06156 385 -KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYY--WGEPMVRDPKGPWLKTLLDVFGHFTGLDA--KP 459 (520)
T ss_pred -CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeec--CCCceeeCCCCHHHHHHHHHHHHHhCCCC--ce
Confidence 57999999999999999999999999998865555555555432 11222 34477899999999999989876 44
Q ss_pred CCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 229 RPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 229 ~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
..++|+||++++. + .+.|||... |....+|++|||++++++.+++++|++++.+++.
T Consensus 460 ~~~~ggTDa~~~~---~--~v~fGP~~~--g~~~~aHt~dE~V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 460 VAIAGSTNAKLFP---N--AVSFGPAMP--GVKYTGHTENEFKTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred eeecChhhhhhCC---c--cEEEcCCCC--CCCCCCcCcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 6788999998874 3 334687642 3234589999999999999999999999999985
No 54
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=2.4e-32 Score=254.83 Aligned_cols=268 Identities=15% Similarity=0.156 Sum_probs=195.3
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCC----cce---eEEecCC--------
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALEN----VEA---IFGLHVS-------- 66 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~----~d~---~~~~~~~-------- 66 (309)
+|||||+++++++|++.|++.+..++++|.|+|++|||.|+ |++++++....+. .|. ++..+++
T Consensus 116 ~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~ 195 (466)
T PRK07318 116 TSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVH 195 (466)
T ss_pred cccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEe
Confidence 48999999999999999999888889999999999999985 9999887642211 111 1111110
Q ss_pred ---------------CCCCCceE------Eec---------------ccccccce-----eEEEEEEEcCCCCCCCCCCC
Q 021680 67 ---------------SLFPVGTV------ASR---------------PGPTLAAG-----GFFEAVINGKGGHAAIPQHT 105 (309)
Q Consensus 67 ---------------~~~~~~~~------~~~---------------~g~~~~g~-----~~~~i~~~G~~~Hs~~p~~g 105 (309)
++.+++.+ .+. ....++|. .|++|+++|+++|++.|+.|
T Consensus 196 ~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g 275 (466)
T PRK07318 196 FEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKG 275 (466)
T ss_pred ccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccC
Confidence 00011110 000 00123454 37999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHh------h----c--------------ccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEec
Q 021680 106 IDPIVAASNVIVSLQHL------V----S--------------READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 106 ~NAi~~~~~~i~~l~~~------~----~--------------~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
.|||..|+++|..|+.. . . ......+..++|++.|+||... .|++.+|+|+
T Consensus 276 ~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~ 350 (466)
T PRK07318 276 VNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRY 350 (466)
T ss_pred ccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeC
Confidence 99999999999998641 0 0 1111234579999999998542 7999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCc--cccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHH
Q 021680 162 FSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF 239 (309)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~ 239 (309)
.|+.+.+++.++|++++++ .+ ++++.. ..+++ .+.++++++.+++++++++|.++ ....++|++|+++
T Consensus 351 ~p~~~~~~v~~~i~~~~~~----~~--~~~~~~--~~~~p~~~~~d~~lv~~l~~a~~~~~g~~~--~~~~~~ggtDa~~ 420 (466)
T PRK07318 351 PVGTDFEKIKAKLEKLIGV----TG--VELSEH--EHQKPHYVPKDDPLVKTLLKVYEKQTGLKG--EEQVIGGGTYARL 420 (466)
T ss_pred CCCCCHHHHHHHHHHHHHh----cC--eEEEEc--cCCCceeeCCCCHHHHHHHHHHHHHhCCCC--CeeEEcchHhHhh
Confidence 9999999999999998764 23 444432 23433 34578899999999999888766 3466788999999
Q ss_pred HhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 240 FAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 240 ~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
|...+| +||.. ||....+|++|||++++++.+++++|+.++.++++
T Consensus 421 ~~~~i~-----~Gp~~--pg~~~~aH~~dE~v~i~~l~~~~~v~~~~l~~~~~ 466 (466)
T PRK07318 421 LKRGVA-----FGAMF--PGSEDTMHQANEYIEIDDLIKAAAIYAEAIYELAK 466 (466)
T ss_pred CCCeEE-----eCCCC--CCCCCCCcCCCcceeHHHHHHHHHHHHHHHHHHhC
Confidence 975433 45442 33334599999999999999999999999999873
No 55
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=2.6e-30 Score=246.14 Aligned_cols=270 Identities=16% Similarity=0.176 Sum_probs=213.0
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC------ccHHH--------HHH---------------cCC--
Q 021680 5 GHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKK--------MLD---------------AGA-- 53 (309)
Q Consensus 5 g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~--------~~~---------------~~~-- 53 (309)
|..+|++++|++++.|++.+..++++|.+++.+|||.+ .|++. +++ .|+
T Consensus 270 DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~ 349 (591)
T PRK13590 270 DGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCI 349 (591)
T ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCCh
Confidence 56799999999999999999889999999999999973 15553 222 111
Q ss_pred ---------CCCcceeEEecCCCCC-------CCceEEecccccccceeEEEEEEEcCCCCCCC-CCC-CCCHHHHHHHH
Q 021680 54 ---------LENVEAIFGLHVSSLF-------PVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQH-TIDPIVAASNV 115 (309)
Q Consensus 54 ---------~~~~d~~~~~~~~~~~-------~~~~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~-p~~-g~NAi~~~~~~ 115 (309)
-+++.+.+.+|.+++. +.+.+ +.++|..+++|+++|+++|++. |.. +.||+..++++
T Consensus 350 ~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV-----~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~ 424 (591)
T PRK13590 350 DDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIV-----TSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAEL 424 (591)
T ss_pred hhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEE-----eeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHH
Confidence 0134567778876641 22222 2356999999999999999997 544 68999999999
Q ss_pred HHHHHHhhcccCCCCCCeeEEEEEEec-CCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEe
Q 021680 116 IVSLQHLVSREADPLDSQVLTVAKFEG-GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFD 194 (309)
Q Consensus 116 i~~l~~~~~~~~~~~~~~t~~i~~i~g-g~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 194 (309)
+..+++.... ....+.+++.|++ |...|+||++|++.+|+|+.+..+.+.+.++|++.+++++...+++++++..
T Consensus 425 i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~~g~~vei~~~ 500 (591)
T PRK13590 425 ALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICERRGLRYTLEET 500 (591)
T ss_pred HHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 9999886432 1234679999874 5689999999999999999999999999999999999998888888887763
Q ss_pred ccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCC
Q 021680 195 DKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNED 274 (309)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~ 274 (309)
...++...++++++.+.+++++ +|.++ ....++|++|+++|.+.+|..++ +||+..+ ..+|++|||++++
T Consensus 501 --~~~~~~~~d~~lv~~~~~aa~~-~G~~~--~~~~sggg~Da~~~a~~~p~~mi-fgpg~~~----g~sH~p~E~v~~e 570 (591)
T PRK13590 501 --MRAAAAPSAPAWQQRWEAAVAA-LGLPL--FRMPSGAGHDAMKLHEIMPQAML-FVRGENA----GISHNPLESSTAD 570 (591)
T ss_pred --ecCCCcCCCHHHHHHHHHHHHH-cCCCc--ccCCcchhHHHHHHHHHCCEEEE-EEeeCCC----CCCCCCccCCCHH
Confidence 4566777889999999999987 48765 33678899999999988885543 4544311 1389999999999
Q ss_pred chHHHHHHHHHHHHHHHhc
Q 021680 275 ALPYGAALHASLATRYLLE 293 (309)
Q Consensus 275 ~~~~~~~i~~~~~~~~~~~ 293 (309)
++.+++++|..++..++.+
T Consensus 571 dL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 571 DMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998754
No 56
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=3e-30 Score=245.49 Aligned_cols=268 Identities=16% Similarity=0.203 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC------ccHHHHH--------H----cCC---------------C
Q 021680 8 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKML--------D----AGA---------------L 54 (309)
Q Consensus 8 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~~~--------~----~~~---------------~ 54 (309)
.|++++|++++.|++.+.+++++|.++..+|||.. .|++.+. + +|. .
T Consensus 273 ~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~ 352 (591)
T PRK13799 273 EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDAI 352 (591)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhc
Confidence 79999999999999999999999999999999972 2555553 1 121 0
Q ss_pred -------CCcceeEEecCCCC-------CCCceEEecccccccceeEEEEEEEcCCCCCCC-C-CCCCCHHHHHHHHHHH
Q 021680 55 -------ENVEAIFGLHVSSL-------FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-P-QHTIDPIVAASNVIVS 118 (309)
Q Consensus 55 -------~~~d~~~~~~~~~~-------~~~~~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~-p-~~g~NAi~~~~~~i~~ 118 (309)
.++++.+.+|.+++ .+.|.+ ..++|..+++|+++|+++|++. | +.+.||+..++++|..
T Consensus 353 ~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV-----~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~ 427 (591)
T PRK13799 353 PKIARDPADVLGFIEVHIEQGPVLLELDIPLGIV-----TSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALY 427 (591)
T ss_pred cccccCCCCccEEEEEEeCCCHHHHHCCCcEEEE-----eeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHH
Confidence 14557778887665 233332 3356999999999999999997 5 3589999999999999
Q ss_pred HHHhhcccCCCCCCeeEEEEEEecC-CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccC
Q 021680 119 LQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKS 197 (309)
Q Consensus 119 l~~~~~~~~~~~~~~t~~i~~i~gg-~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~ 197 (309)
++++..+. +....+++++.|+++ .+.|+||++|++.+|+|..+.++.+.+.++|++.++++++..++.+++++. .
T Consensus 428 l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~~g~~~ei~~~--~ 503 (591)
T PRK13799 428 IEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAARRGIEYKAELA--M 503 (591)
T ss_pred HHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEE--e
Confidence 98875432 112357889999864 489999999999999999999999999999999999998888888777663 4
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchH
Q 021680 198 FYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 277 (309)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~ 277 (309)
..+++..++++++.+.+++++ +|.++ ....+++++|+++|.+..|..+++.|+++.+ .+|+++||++++++.
T Consensus 504 ~~~~~~~d~~lv~~~~~a~~~-~G~~~--~~~~sgag~Da~~~a~~~p~amif~~~g~~g-----~sHsp~E~v~~edL~ 575 (591)
T PRK13799 504 KAAAAPCAPELMKQLEAATDA-AGVPL--FELASGAGHDAMKIAEIMDQAMLFTRCGNAG-----ISHNPLESMTADDME 575 (591)
T ss_pred cCCCcCCCHHHHHHHHHHHHH-cCCCc--eecCcchHHHHHHHHhhCCEEEEEEecCCCC-----CCCCccccCCHHHHH
Confidence 456677888999999988876 58765 3367789999999998877666555543322 289999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 021680 278 YGAALHASLATRYLL 292 (309)
Q Consensus 278 ~~~~i~~~~~~~~~~ 292 (309)
.++++|..++..+..
T Consensus 576 ~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 576 LSADAFLDFLNNFAE 590 (591)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988763
No 57
>PRK07205 hypothetical protein; Provisional
Probab=99.97 E-value=6.4e-30 Score=237.35 Aligned_cols=267 Identities=14% Similarity=0.040 Sum_probs=185.7
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCC----Ccce---eEEecCC------CC
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALE----NVEA---IFGLHVS------SL 68 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~----~~d~---~~~~~~~------~~ 68 (309)
+|||||+++++|.|+++|++.+..++++|.|+|++|||+|+ |++++++..... ..|. ++..+.+ ..
T Consensus 114 a~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~~~~~~~~~~v~~~ekG~~~~~i~~ 193 (444)
T PRK07205 114 TQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATMGFAPDSSFPLTYAEKGLLQAKLVG 193 (444)
T ss_pred cccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCeeECCCCCCceEEEEeceEEEEEEe
Confidence 58999999999999999999988899999999999999985 878777642110 0110 0000000 01
Q ss_pred CCCceEEeccc--------c---------------cccce----eEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021680 69 FPVGTVASRPG--------P---------------TLAAG----GFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQH 121 (309)
Q Consensus 69 ~~~~~~~~~~g--------~---------------~~~g~----~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~ 121 (309)
+|++......| . ..+|. .+.+++++|+++|++.|+.|.|||..++++|.++++
T Consensus 194 ~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~ 273 (444)
T PRK07205 194 PGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSVHAKDAPQGINAVIRLAKALVVLEP 273 (444)
T ss_pred CCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEcccCCCccCcCHHHHHHHHHHhccH
Confidence 22222111111 0 01121 234999999999999999999999999999988864
Q ss_pred hh-----cc--------------cCC-CCCCeeEEEEEEecCCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHH
Q 021680 122 LV-----SR--------------EAD-PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 181 (309)
Q Consensus 122 ~~-----~~--------------~~~-~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~ 181 (309)
.. .. ..+ ....+++|++.+ |+||++|++.+|+|+.|+++.+++.+.|++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~~------nvvP~~a~~~ld~R~~p~~~~e~v~~~i~~~~~~- 346 (444)
T PRK07205 274 HPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAGL------TITKEKSEIRIDIRIPVLADKEKLVQQLSQKAQE- 346 (444)
T ss_pred HHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEEE------EEECCEEEEEEEEeCCCCCCHHHHHHHHHHHHHH-
Confidence 31 00 001 133567888654 7999999999999999999999999999998754
Q ss_pred HHHhCCeeEEEEeccCCCCc--cccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhhhcCeeEEEeccCCCCCC
Q 021680 182 ASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKG 259 (309)
Q Consensus 182 ~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g 259 (309)
.+. +++.. ..+++ .+.++++++.+.+++++.+|.+. ....++|++|+.++ .|++ .+|+.. ||
T Consensus 347 ---~~v--~~~~~--~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~--~~~~~gg~~~~~~~---~~~i--~~G~~~--Pg 410 (444)
T PRK07205 347 ---YGL--TYEEF--DYLAPLYVPLDSELVSTLMSVYQEKTGDDS--PAQSSGGATFARTM---PNCV--AFGALF--PG 410 (444)
T ss_pred ---cCc--EEEEe--cCCCceeeCCCcHHHHHHHHHHHHHhCCCC--ceEEeccHHHHHhC---CCcE--EECCcc--CC
Confidence 233 33321 12333 34578899999999999888754 33445666665432 3433 467543 33
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021680 260 KFETGHSPYFRVNEDALPYGAALHASLATRYLL 292 (309)
Q Consensus 260 ~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~~ 292 (309)
....+|++|||++++++.+++++|++++.++++
T Consensus 411 ~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 411 APQTEHQANEHIVLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred CCCCCcCcccCccHHHHHHHHHHHHHHHHHHhc
Confidence 345699999999999999999999999999875
No 58
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.97 E-value=4.5e-30 Score=237.38 Aligned_cols=263 Identities=16% Similarity=0.080 Sum_probs=185.3
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCC----cce---eEEecC---------
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALEN----VEA---IFGLHV--------- 65 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~----~d~---~~~~~~--------- 65 (309)
+|||||++++++.|+++|++.+.+++++|.|+|++|||.|+ |++++++.....+ .|. ++..++
T Consensus 104 a~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~~~~d~~~~~~~~e~g~~~~~~~v 183 (447)
T TIGR01887 104 TLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAPDIGFTPDAEFPIIYGEKGIVTLEISF 183 (447)
T ss_pred cccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCCCEEEeCCCCcceEEEecCeEEEEEEe
Confidence 58999999999999999999888889999999999999985 8888876532111 121 221111
Q ss_pred -------------CCCCCCceE------Eec-c-------------------cccccceeEEEEEEEcCCCCCCCCCCCC
Q 021680 66 -------------SSLFPVGTV------ASR-P-------------------GPTLAAGGFFEAVINGKGGHAAIPQHTI 106 (309)
Q Consensus 66 -------------~~~~~~~~~------~~~-~-------------------g~~~~g~~~~~i~~~G~~~Hs~~p~~g~ 106 (309)
..++|++.+ .+. . |...++..|++|+++|+++|++.|+.|.
T Consensus 184 ~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~G~~aHss~p~~G~ 263 (447)
T TIGR01887 184 KDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSFEVNDGTATITLEGKSAHGSAPEKGI 263 (447)
T ss_pred ccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEEEecCCEEEEEEEeeecccCCCccCc
Confidence 123344432 110 0 1112223379999999999999999999
Q ss_pred CHHHHHHHHHHHHH--Hhhcc---------------------c-CCCCCCeeEEEEEEecCCcCceecCeEEEEEEEecC
Q 021680 107 DPIVAASNVIVSLQ--HLVSR---------------------E-ADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAF 162 (309)
Q Consensus 107 NAi~~~~~~i~~l~--~~~~~---------------------~-~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~~ 162 (309)
|||..|++++..+. +...+ . ....+.+++|++.|++| +|++|++.+|+|++
T Consensus 264 NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nvg~I~~g-----~p~~~~~~~d~R~~ 338 (447)
T TIGR01887 264 NAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNVGVIDYE-----NAEAGLIGLNVRYP 338 (447)
T ss_pred cHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEEEEEEEe-----CCcEEEEEEEEecC
Confidence 99999999999986 21100 0 01134578999999988 48999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec-cCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHh
Q 021680 163 SKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFA 241 (309)
Q Consensus 163 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~ 241 (309)
|+++.+++.+++.+.+. +. .++.... ..++. .+.++++++.+.+++++++|.++ .....+|+||++++.
T Consensus 339 p~~~~e~~~~~i~~~~~------~~-~~~~~~~~~~p~~-~~~~~~lv~~l~~~~~~~~g~~~--~~~~~~ggtda~~~~ 408 (447)
T TIGR01887 339 VGNDPDTMLKNELAKES------GI-VEVTENGYLKPLY-VPKDDPLVQTLMKVYEKQTGDEG--TPVAIGGGTYARLME 408 (447)
T ss_pred CCCCHHHHHHHHHHHhh------Cc-EEEEEccCCCCeE-ECCCCHHHHHHHHHHHHHhCCCC--CeeEecchhhhhhCC
Confidence 99999987777664332 11 2222211 11111 24467899999999999988765 335677889887753
Q ss_pred hhcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 021680 242 EAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 287 (309)
Q Consensus 242 ~~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~ 287 (309)
. .+.+||.. ||....+|++|||++++++..++++|..++
T Consensus 409 ----~-~i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 409 ----N-GVAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred ----C-cEEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 2 24467654 445567999999999999999999998764
No 59
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.97 E-value=3.9e-29 Score=233.79 Aligned_cols=261 Identities=18% Similarity=0.188 Sum_probs=188.9
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCC------CCCCceE--
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSS------LFPVGTV-- 74 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~------~~~~~~~-- 74 (309)
+|+|+++++++++++. .+ .++++|.++|++|||.| .|++.+....+ ..++++..++.. +.+.+..
T Consensus 108 ~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~~~~~~~d~~~~~~~~~g~~~~~~~~ 181 (477)
T TIGR01893 108 ADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SGKILINIDSEEEGEFIVGCAGGRNVD 181 (477)
T ss_pred ccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CCcEEEEecCCCCCeEEEECCCCeeEE
Confidence 5999999999987764 32 35779999999999988 48888865432 234455443211 0111110
Q ss_pred ---EecccccccceeEEEEEEEc-CCCCCCC-CCCC-CCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCce
Q 021680 75 ---ASRPGPTLAAGGFFEAVING-KGGHAAI-PQHT-IDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNI 148 (309)
Q Consensus 75 ---~~~~g~~~~g~~~~~i~~~G-~~~Hs~~-p~~g-~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~ 148 (309)
.......++|..+++|+++| +++|++. |+.+ .||+..++++|.++++.. ..+++.+.||...|+
T Consensus 182 ~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~----------~~~v~~~~gg~~~N~ 251 (477)
T TIGR01893 182 ITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL----------NFRLSDIKGGSKRNA 251 (477)
T ss_pred EEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC----------CeEEEEEeCCCcccc
Confidence 00001114688899999999 9999987 8888 599999999999998752 367888999999999
Q ss_pred ecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHH--hC----------------------------------------
Q 021680 149 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASV--QR---------------------------------------- 186 (309)
Q Consensus 149 vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~--~~---------------------------------------- 186 (309)
||++|++.+|+|.......+.+.+.+.+.+...+.. .+
T Consensus 252 ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g~~~~~~~ 331 (477)
T TIGR01893 252 IPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVFSENTTDKLINALNGLPNGVQSVSDE 331 (477)
T ss_pred cCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCcccccCHHHHHHHHHHHHHCCccceeeccC
Confidence 999999999999877777777777666665544311 00
Q ss_pred ------------------------------------------------CeeEEEEeccCCCCcc--ccCHHHHHHHHHHH
Q 021680 187 ------------------------------------------------CNATVTFDDKSFYPVT--VNNKNLHEHFQKVA 216 (309)
Q Consensus 187 ------------------------------------------------~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~ 216 (309)
..++++. ...++++ +.++++++.+.+++
T Consensus 332 ~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~~--~~~~~p~~~~~d~plv~~l~~a~ 409 (477)
T TIGR01893 332 EPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVEV--SAGYPSWQPDPQSNLLDTARKVY 409 (477)
T ss_pred CCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEEE--ecCCCcccCCCCCHHHHHHHHHH
Confidence 1223333 1234444 35778999999999
Q ss_pred HHhcCccccccCCCCCCCchHHHHhhhcCee-EEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021680 217 ADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 290 (309)
Q Consensus 217 ~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v-~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~ 290 (309)
++++|.++ .....+|++|+++|.+.+|.+ ...+||...+ +|++||++++++|.+++++|.+++..+
T Consensus 410 ~~~~g~~~--~~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~~~------~H~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 410 SEMFGEDP--EVKVIHAGLECGIISSKIPDIDMISIGPNIYD------PHSPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred HHHHCCCC--eEEEeecCccHHHHHhhCCCceEEEeCCCCCC------CCCCCceeeHHHHHHHHHHHHHHHHhc
Confidence 99999876 346888999999998765433 3456876543 999999999999999999999998653
No 60
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.97 E-value=2.4e-29 Score=218.89 Aligned_cols=274 Identities=18% Similarity=0.199 Sum_probs=207.7
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc--cHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG--GAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 80 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 80 (309)
+||+|...+++|.|++.|+..|.+++++|.+.|++|||.|+ |++.+.+...+......++++-....+... .+.+.
T Consensus 127 aqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l~~~filDEG~~se~d~--~~vfy 204 (420)
T KOG2275|consen 127 AQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKLNLGFILDEGGATENDF--ATVFY 204 (420)
T ss_pred ccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcccceeEEecCCCCCcccc--eeEEE
Confidence 58999999999999999999999999999999999999984 888888745566656666654321122232 34467
Q ss_pred cccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---------cCCCCCCeeEEEEEEecCCcCceecC
Q 021680 81 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR---------EADPLDSQVLTVAKFEGGGAFNIIPD 151 (309)
Q Consensus 81 ~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~---------~~~~~~~~t~~i~~i~gg~~~n~vP~ 151 (309)
+++|.+|++|+++|++||+|.|... .|+..+..+|+.+.+.... .....+.+|+|++.|+||.+.|++|.
T Consensus 205 aEkg~w~~~v~~~G~~GHss~~~~n-Ta~~~l~klv~~~~~fr~~q~~~l~~~p~~~~~~vtT~Nv~~i~GGv~~N~~P~ 283 (420)
T KOG2275|consen 205 AEKGPWWLKVTANGTPGHSSYPPPN-TAIEKLEKLVESLEEFREKQVDLLASGPKLALGDVTTINVGIINGGVQSNVLPE 283 (420)
T ss_pred EeeceeEEEEEecCCCCCCCCCCCc-cHHHHHHHHHHHHHHhHHHHHHHhhcCCceeccceeEEeeeeeecccccCcCch
Confidence 7889999999999999999993211 3566666666666555311 11225678999999999999999999
Q ss_pred eEEEEEEEecCChHHHHHHHHHHH-HHHHHHHHHhCCeeEEEEecc--CCCCcc---ccCHHHHHHHHHHHHHhcCcccc
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIE-EVVMKQASVQRCNATVTFDDK--SFYPVT---VNNKNLHEHFQKVAADMLGVQNI 225 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~v~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~ 225 (309)
..++.+|+|..+..+..++.+++. ++.+ +.+-..++++.+. ..+++. +.+.|++..+..++++. +.+.
T Consensus 284 ~~ea~~dirv~~~~d~~~i~~~l~~~w~~----~~~eg~t~~f~~~~~~~~~~~t~~~~s~p~w~~~~~a~~~~-~~k~- 357 (420)
T KOG2275|consen 284 TFEAAFDIRVRPHVDVKAIRDQLEDEWAE----EAGEGVTLEFSQKVILDYPPVTPTDDSNPFWTAFAGALKDE-GGKG- 357 (420)
T ss_pred hheeeeeeEeccCCCHHHHHHHHHHHhhh----hcCCceEEeccCcccCCCCCCCCCCCCChHHHHHHHHHHHh-cCcc-
Confidence 999999999999999999999984 4443 3344555555431 134333 34568999999999987 4444
Q ss_pred ccCCCCCCCchHHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 226 KENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 226 ~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
.+...+|+||.+++++. +|..- +.+..+. .-..|.-||++..+.+.+++++|..++..+.
T Consensus 358 -~~~i~~gstdsr~~rn~gvp~~~-fsp~~nt----~~~~H~hnE~l~~~~~l~gi~~~~~~i~~~~ 418 (420)
T KOG2275|consen 358 -YPEIGPGSTDSRHIRNEGVPAIG-FSPIINT----PMLLHDHNEFLNEKVFLRGIEIYYTIIVNLA 418 (420)
T ss_pred -ceeecccccccchhhhcCcchhc-ccccccc----cceecchhhhhCchhhhhhhhHHHHHHHhhc
Confidence 35889999999999986 88544 3444442 2469999999999999999999999887654
No 61
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.97 E-value=6.7e-29 Score=230.88 Aligned_cols=256 Identities=16% Similarity=0.175 Sum_probs=186.0
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCCCCCcceeEEecCCCCCCCceEEe-ccc--
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS-RPG-- 79 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~g-- 79 (309)
+|+|++++++|+++ ++.+. ++++|.++|++|||.|+ |++.+.. .. ...++++++++.. .+.+.. ..|
T Consensus 114 aD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~~~~i~~e~~~---~g~l~~g~~G~~ 184 (485)
T PRK15026 114 ADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQADILINTDSEE---EGEIYMGCAGGI 184 (485)
T ss_pred CccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCcCEEEEeCCCC---CCeEEEeCCCcc
Confidence 58999999988765 44444 48899999999999985 8888754 33 3578899887642 232211 111
Q ss_pred -----------ccccceeEEEEEEEc-CCCCCCC-CCCCC-CHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCc
Q 021680 80 -----------PTLAAGGFFEAVING-KGGHAAI-PQHTI-DPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGA 145 (309)
Q Consensus 80 -----------~~~~g~~~~~i~~~G-~~~Hs~~-p~~g~-NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~ 145 (309)
...+|..+++|+++| +++||+. |+.|. |||..|+++|.++.. ..+++++.|+||..
T Consensus 185 ~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~~----------~~~~~v~~i~GG~~ 254 (485)
T PRK15026 185 DFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAE----------ELDLRLIDFNGGTL 254 (485)
T ss_pred eEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhHh----------hCCeEEEEEeCCCc
Confidence 011467789999999 9999996 99999 999999999998552 26789999999999
Q ss_pred CceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHH-------------------------------------------
Q 021680 146 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA------------------------------------------- 182 (309)
Q Consensus 146 ~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~------------------------------------------- 182 (309)
.|+||++|++.+++|.......+.+.+.+.+.+.+..
T Consensus 255 ~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv~~~ 334 (485)
T PRK15026 255 RNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN 334 (485)
T ss_pred cCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccccccCHHHHHHHHHHHHHCCcccEEe
Confidence 9999999988888887766666655555544433100
Q ss_pred -------------------------------------------------HHhCCeeEEEEeccCCCCcccc--CHHHHHH
Q 021680 183 -------------------------------------------------SVQRCNATVTFDDKSFYPVTVN--NKNLHEH 211 (309)
Q Consensus 183 -------------------------------------------------~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~ 211 (309)
...+. +++. ...||++.. ++++++.
T Consensus 335 s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~--~~~~--~~~~p~w~~~~ds~lv~~ 410 (485)
T PRK15026 335 SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGA--KTEA--KGAYPGWQPDANSPVMHL 410 (485)
T ss_pred ccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCc--EEEE--eCCCCCCCCCCCCHHHHH
Confidence 01111 1111 234666644 5789999
Q ss_pred HHHHHHHhcCccccccCCCCCCCchHHHHhhhcCee-EEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021680 212 FQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRY 290 (309)
Q Consensus 212 ~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v-~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~ 290 (309)
+.++|++++|.++ .....+|++|++.|.+..|.+ +..+||...+ +|++||+++++++.+..+++..++.++
T Consensus 411 l~~~y~e~~G~~~--~~~~ihaglEcG~~~~~~p~i~~VsfGP~~~~------~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 411 VRETYQRLFNKTP--NIQIIHAGLECGLFKKPYPEMDMVSIGPTITG------PHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred HHHHHHHHHCCCC--eEEEEEEEehHHHHHhhCCCCCEEEECCCCCC------CCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 9999999999887 447889999999999764431 3346888754 999999999999966666666666655
No 62
>PRK08554 peptidase; Reviewed
Probab=99.96 E-value=1.3e-27 Score=220.61 Aligned_cols=271 Identities=20% Similarity=0.206 Sum_probs=183.9
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHHcCC--CCCcceeEEecCCCCCCCceEEeccc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDAGA--LENVEAIFGLHVSSLFPVGTVASRPG 79 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~g 79 (309)
+|||||+++++++|+++|++. .++++|.|+|++|||+|+ +..++++... ....|++++.+++...+ .+..+.|
T Consensus 101 ~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~iv~Ept~~~~--~~~~~kg 176 (438)
T PRK08554 101 SADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPKYMINADGIGMKP--IIRRRKG 176 (438)
T ss_pred cccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCCEEEEeCCCCCcc--hhhcCCc
Confidence 477999999999999999874 368899999999999985 4445544311 12468888866543221 1011101
Q ss_pred cc-----------ccce---eEEEEEEEcCC-CCCCCCCCCCC--HHHHHHHHHHHHHHhhcccC-----C--CCCCeeE
Q 021680 80 PT-----------LAAG---GFFEAVINGKG-GHAAIPQHTID--PIVAASNVIVSLQHLVSREA-----D--PLDSQVL 135 (309)
Q Consensus 80 ~~-----------~~g~---~~~~i~~~G~~-~Hs~~p~~g~N--Ai~~~~~~i~~l~~~~~~~~-----~--~~~~~t~ 135 (309)
.. -.|. .++.+++.|.+ +|++.+..|.| ++..+.+++.++..+..... . .....++
T Consensus 177 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 256 (438)
T PRK08554 177 FGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVLAVSLEGKFLKGNVVPGEVTL 256 (438)
T ss_pred eEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCceEEEEeeeeeecCcccceeEE
Confidence 00 0122 35556666665 99998765554 58888888877654321000 0 1112233
Q ss_pred EEEEEecCC-----------------------------------cCcee---cCeEEEEEEEecCChHHHHHHHHHHHHH
Q 021680 136 TVAKFEGGG-----------------------------------AFNII---PDSVTIGGTFRAFSKESIIQLKQRIEEV 177 (309)
Q Consensus 136 ~i~~i~gg~-----------------------------------~~n~v---P~~~~~~~diR~~~~~~~~~~~~~i~~~ 177 (309)
++....+|. ..|++ |+.|++.+|+|+.+ .+.+++.++|+++
T Consensus 257 ~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~DiR~~~-~~~e~v~~~i~~~ 335 (438)
T PRK08554 257 TYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKLDIRAMS-YSKEDIERTLKEV 335 (438)
T ss_pred EEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEEEEEecC-CCHHHHHHHHHHH
Confidence 332223333 44555 99999999999988 6889999999988
Q ss_pred HHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHHHhh-hcCeeEEEeccCCC
Q 021680 178 VMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-AIPGYFYYLGMNDE 256 (309)
Q Consensus 178 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~v~~~~G~~~~ 256 (309)
++.. ..+.+++++.....+.+..+.++++++.+++++++ +|.++ .+...+|+||++++.. .+|++. +||++.
T Consensus 336 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~-~g~~~--~~~~~~GgtDa~~~~~~Gip~v~--~Gp~~~ 408 (438)
T PRK08554 336 LEFN--LPEAEVEIRTNEKAGYLFTPPDEEIVKVALRVLKE-LGEDA--EPVEGPGASDSRYFTPYGVKAID--FGPKGG 408 (438)
T ss_pred hhcc--CCCceEEEEeccCCCCcCCCCChHHHHHHHHHHHH-hCCCc--EEEecCCchHHHHHHhcCCCceE--ECCCCC
Confidence 8643 13445555532223333455688999999999988 58776 4578899999999976 499876 477543
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 257 TKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 257 ~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
. +|++|||++++++.+++++|.+++.+|+
T Consensus 409 ~------~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 409 N------IHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred C------CCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 3 9999999999999999999999998886
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.86 E-value=6.3e-20 Score=159.00 Aligned_cols=275 Identities=18% Similarity=0.210 Sum_probs=198.7
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc-cHHHHHH---cCCCCCcceeEEecCCCCCCCce--EEec
Q 021680 4 CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG-GAKKMLD---AGALENVEAIFGLHVSSLFPVGT--VASR 77 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~--~~~~ 77 (309)
+|-||.+++-+.|++++++.|..++-+|+|+|..-||+|+ |...+.+ +.+|.++|++++.+. .+.++ -++.
T Consensus 131 TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdn---yWlg~kkPclt 207 (473)
T KOG2276|consen 131 TDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEGMEESGSEGLDELIEKEKDKFFKDVDFVCISDN---YWLGTKKPCLT 207 (473)
T ss_pred CCCCccchHHHHHHHHHHHhCccccceEEEEEEechhccCccHHHHHHHHhhhhhccCCEEEeeCc---eeccCCCcccc
Confidence 4568999999999999999999999999999999999995 5555544 567888998887432 22222 1222
Q ss_pred ccccccceeEEEEEEEc--CCCCCCC-CCCCCCHHHHHHHHHHHHHHhhcc----------------c------------
Q 021680 78 PGPTLAAGGFFEAVING--KGGHAAI-PQHTIDPIVAASNVIVSLQHLVSR----------------E------------ 126 (309)
Q Consensus 78 ~g~~~~g~~~~~i~~~G--~~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~----------------~------------ 126 (309)
.|. +|...|.|++.| +..||+. ...-.-|+..|+.++..|.+...+ +
T Consensus 208 yGl--RG~~yf~i~v~g~~~DlHSGvfGG~~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~ 285 (473)
T KOG2276|consen 208 YGL--RGVIYFQIEVEGPSKDLHSGVFGGVVHEAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVE 285 (473)
T ss_pred ccc--ccceeEEEEEeecccccccccccchhHHHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHh
Confidence 232 388899999999 8889997 333445666666666665442211 0
Q ss_pred -----C----CC-----------CCCeeEEEEEEecC----CcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 021680 127 -----A----DP-----------LDSQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 182 (309)
Q Consensus 127 -----~----~~-----------~~~~t~~i~~i~gg----~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~ 182 (309)
. .+ =.++++++..|+|- .+..+||.++.-++.+|+.|.++.+.+.+.+.+.++..-
T Consensus 286 e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihgIeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f 365 (473)
T KOG2276|consen 286 EFKEATGSQMLPTDDKKRILMHRWRYPSLSIHGIEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVF 365 (473)
T ss_pred hhhccccccccccCchHHHhhhhcccCccceecccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 0 00 01356677777753 678899999999999999999999999999999998776
Q ss_pred HHhCC--eeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCCCchH-HHHhhh--cCeeEEEeccCCCC
Q 021680 183 SVQRC--NATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEA--IPGYFYYLGMNDET 257 (309)
Q Consensus 183 ~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~--~p~v~~~~G~~~~~ 257 (309)
++.+. +++++..........+.+++-..+++++++.++|.+| ...+.+|+-.. ..|++. -+.+..-+|..+++
T Consensus 366 ~~~nS~N~l~~~~~~~~~~Wv~d~~~~~y~a~krA~~~v~gveP--d~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~dD~ 443 (473)
T KOG2276|consen 366 AELNSPNKLKVSMGHAGAPWVSDPDDPHYLALKRAIETVYGVEP--DFTREGGSIPVTLTFQDITGKSVLLLPYGASDDG 443 (473)
T ss_pred HhcCCCCceEEeecCCCCceecCCCchhHHHHHHHHHHhhCCCC--CccccCCccceehHHHHHhCCCeEEecccccccc
Confidence 66554 4555553211111224466778899999999999987 55667666433 335554 45556556665554
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 258 KGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 258 ~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
+|+.||++.+..+.++++++++++.++.
T Consensus 444 ------aHsqNEkl~i~N~~~G~k~l~ay~~el~ 471 (473)
T KOG2276|consen 444 ------AHSQNEKLNITNYVEGTKVLAAYISELA 471 (473)
T ss_pred ------hhhhcccccHHHHhhhHHHHHHHHHHHh
Confidence 9999999999999999999999998875
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.85 E-value=1.8e-20 Score=168.20 Aligned_cols=262 Identities=19% Similarity=0.196 Sum_probs=209.1
Q ss_pred chhhHHHHHHHHHHHHHHhcc-CCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEecCCCCCCCceEEeccccc
Q 021680 4 CGHDAHVAMLLGAAKMLQVFR-HEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPT 81 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l~~~~-~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 81 (309)
.|+++|++.++.++..+++.. .-++++|.+.|++|||.| .|+..+.-.. | .++..+.++ +.+.|.+... ..
T Consensus 143 aD~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~-f-~a~~ay~iD---Gg~~g~i~~e-a~- 215 (414)
T COG2195 143 ADDKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAANKDVAR-F-LADFAYTLD---GGPVGEIPRE-AF- 215 (414)
T ss_pred CcchhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhhhccHHh-h-hcceeEecC---CCccCeeeee-cc-
Confidence 477899999999999998553 468999999999999998 6877664432 2 356666655 4566666543 12
Q ss_pred ccceeEEEEEEEcCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEe
Q 021680 82 LAAGGFFEAVINGKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 160 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~-p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR 160 (309)
+...+++++.|+.+|++. +....||++.+.+++..+...... ..++.+.|....+...|.|.+++.....+|
T Consensus 216 --~~~~~~~~~~g~~~h~~~a~~~~i~a~~~a~e~~~~~~~~~~~-----e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR 288 (414)
T COG2195 216 --NAAAVRATIVGPNVHPGSAKGKMINALLLAAEFILELPLEEVP-----ELTEGPEGVYHLGDSTNSVEETSLNLAIIR 288 (414)
T ss_pred --chheeeeeeeccCcCccchHHHHhhHHHhhhhhhhcCCccccc-----ccccccceEEeccccccchhhhhhhhhhhh
Confidence 455799999999999988 788999999998888877543211 235667788889999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhC--CeeEEEEeccCCCCcc--ccCHHHHHHHHHHHHHhcCccccccCCCCCCCch
Q 021680 161 AFSKESIIQLKQRIEEVVMKQASVQR--CNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTED 236 (309)
Q Consensus 161 ~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD 236 (309)
.......+..+..+++.+.+.+++.+ ..++++.. ..||.+ ..++.++..++++++++ +.+| ....+.|++|
T Consensus 289 ~~d~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p--~v~~i~gGtd 363 (414)
T COG2195 289 DFDNLLFRARKDSMKDVVEEMAASLGKLAGAELEVK--DSYPGWKIKPDSPLVDLAKKAYKEL-GIKP--KVKPIHGGTD 363 (414)
T ss_pred hcchhHHHHhHHHHHHHHHHHHHHhhhccceEEEEe--ccccCcCCCCCchHHHHHHHHHHHh-CCCc--eEEEeecccc
Confidence 99999999999999999999988887 56666663 455554 34667999999999998 5556 3489999999
Q ss_pred HHHHhhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 021680 237 FSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATRYL 291 (309)
Q Consensus 237 ~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~~~~ 291 (309)
++.+... +|+..++.|| ..+ .|+++||++++++.+..+++..++..+-
T Consensus 364 ~~~is~~g~p~~~i~~Gp-~~n------~Hs~~E~v~I~s~ek~~~~l~~l~~~~~ 412 (414)
T COG2195 364 GGVLSFKGLPTPNISTGP-GEN------PHSPDEFVSIESMEKAVQVLVELLKLAA 412 (414)
T ss_pred hhhhhccCCCCceEeccc-ccC------CCCccceeehHHHHHHHHHHHHHHHHhh
Confidence 9999875 8999999998 444 9999999999999999999988877653
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.79 E-value=1.3e-18 Score=130.61 Aligned_cols=103 Identities=30% Similarity=0.376 Sum_probs=93.9
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CCCCCeeEEEEEEecCCcCceecCeEEEE
Q 021680 82 LAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DPLDSQVLTVAKFEGGGAFNIIPDSVTIG 156 (309)
Q Consensus 82 ~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~~~~~t~~i~~i~gg~~~n~vP~~~~~~ 156 (309)
++|..+++|+++|+++|++.|+.|+||+..++++|..|+++..+.. .....++++++.++||...|+||++|++.
T Consensus 3 ~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~~ 82 (111)
T PF07687_consen 3 HRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATLT 82 (111)
T ss_dssp EEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEEE
T ss_pred CCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEEE
Confidence 4689999999999999999999999999999999999998854332 45667999999999999999999999999
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHH
Q 021680 157 GTFRAFSKESIIQLKQRIEEVVMKQASV 184 (309)
Q Consensus 157 ~diR~~~~~~~~~~~~~i~~~~~~~~~~ 184 (309)
+++|++|.++.+++++.|++.+++.+.+
T Consensus 83 ~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 83 VDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 9999999999999999999999987654
No 66
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.69 E-value=8.5e-17 Score=132.32 Aligned_cols=151 Identities=26% Similarity=0.336 Sum_probs=113.7
Q ss_pred Cccchh---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc--cHHHHHHcC--CCCCcceeEEecCCCCCCCce
Q 021680 1 MHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG--GAKKMLDAG--ALENVEAIFGLHVSSLFPVGT 73 (309)
Q Consensus 1 ~h~~g~---~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~ 73 (309)
+|+||+ |++++++++|++.|++.+..++++|.|+|++|||+|+ |++.+++++ +..++|+++..++. ..
T Consensus 29 ~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~l~~~~~~~~~~~~~~~~~e~~-----~~ 103 (189)
T PF01546_consen 29 LYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKHLLEEGAFFGLHPDYVIIGEPT-----GK 103 (189)
T ss_dssp EESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHHHHHHCEEEEEEESEEEECECE-----TT
T ss_pred EEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhhhhhhccccccccccccccccc-----cc
Confidence 367775 8999999999999998889999999999999999995 999999884 12234444442211 11
Q ss_pred EEecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeE
Q 021680 74 VASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSV 153 (309)
Q Consensus 74 ~~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~ 153 (309)
+. ..
T Consensus 104 ----------~~--~~---------------------------------------------------------------- 107 (189)
T PF01546_consen 104 ----------GG--VG---------------------------------------------------------------- 107 (189)
T ss_dssp ----------SE--EE----------------------------------------------------------------
T ss_pred ----------cc--cc----------------------------------------------------------------
Confidence 10 00
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCCC
Q 021680 154 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMG 233 (309)
Q Consensus 154 ~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 233 (309)
...++++++.+++++++.++... ......|
T Consensus 108 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 137 (189)
T PF01546_consen 108 ------------------------------------------------SDNDPPLVQALQAAAQEVGGEPP--EPVASGG 137 (189)
T ss_dssp ------------------------------------------------HCTCHHHHHHHHHHHHHTTSSEE--EEEEESS
T ss_pred ------------------------------------------------ccccHHHHHHHHHHHHHHhhccc--cccceec
Confidence 34577799999999999865233 4478899
Q ss_pred CchHHHHhh--hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 021680 234 TEDFSFFAE--AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 288 (309)
Q Consensus 234 ~tD~~~~~~--~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~~i~~~~~~ 288 (309)
++|++++.+ ..+..+.++|++.. .+|++||+++++++.+++++|++++.
T Consensus 138 ~tD~~~~~~~~~~~~~~i~~G~~~~------~~H~~~E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 138 GTDAGFLAEVKGLGIPAIGFGPGGS------NAHTPDEYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp SSTHHHHHCHHHTTEEEEEEESCEE------STTSTT-EEEHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhccccceeeeCCCCC------CCCCCCcEecHHHHHHHHHHHHHHHh
Confidence 999999995 33334445677653 39999999999999999999999885
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.68 E-value=1.3e-07 Score=84.00 Aligned_cols=169 Identities=15% Similarity=0.182 Sum_probs=104.0
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHc--CCCC--CcceeEEecCCCCCCC-----c
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDA--GALE--NVEAIFGLHVSSLFPV-----G 72 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~--~~~~--~~d~~~~~~~~~~~~~-----~ 72 (309)
+.|||.|+|+.|++++.+.+. ....|+|.|+.++|||.- .|++..+.. +..+ ++++-.+++.+...+. +
T Consensus 138 a~DMKsGlav~la~L~~fa~~-~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ 216 (553)
T COG4187 138 ALDMKSGLAVHLACLEEFAAR-TDRQGNLLFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQG 216 (553)
T ss_pred chhhhhhhHHHHHHHHHHhhC-CCCCCcEEEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccc
Confidence 468999999999999999876 689999999999999987 477665432 1111 3444444333222221 2
Q ss_pred eEEecccccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhh---cccCCCCCCeeEEE--EEEecCCcCc
Q 021680 73 TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLV---SREADPLDSQVLTV--AKFEGGGAFN 147 (309)
Q Consensus 73 ~~~~~~g~~~~g~~~~~i~~~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~---~~~~~~~~~~t~~i--~~i~gg~~~n 147 (309)
.. +..|+. |.+---.-+.|...|.+.|..|+||-..+++++++|+... .+......++..+. --++ ++.|
T Consensus 217 ry-vYtGti--GKLLp~f~vvG~etHvG~~f~Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlK--e~Y~ 291 (553)
T COG4187 217 RY-VYTGTI--GKLLPFFFVVGCETHVGYPFEGVNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLK--ESYN 291 (553)
T ss_pred eE-EEeccc--hhhcceeEEEeeccccCCcccCCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhh--hhcc
Confidence 22 222433 5555566778999999999999999999999999986432 22211111111111 1111 2333
Q ss_pred e-ecCeEEEEEEEecCChHHHHHHHHHHHHHH
Q 021680 148 I-IPDSVTIGGTFRAFSKESIIQLKQRIEEVV 178 (309)
Q Consensus 148 ~-vP~~~~~~~diR~~~~~~~~~~~~~i~~~~ 178 (309)
+ .|..+.+.+++=+. +.+.+++.+++++..
T Consensus 292 VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~~a 322 (553)
T COG4187 292 VQTPERAWLYFNWLYH-SRTAKELFDRLKEEA 322 (553)
T ss_pred ccCcchhhhhheehhh-cCCHHHHHHHHHHHH
Confidence 3 58888888887544 234444444444433
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=98.61 E-value=6.9e-07 Score=79.91 Aligned_cols=71 Identities=23% Similarity=0.251 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHhcCccccccC-CCCCCCchHHHHhh---hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 021680 205 NKNLHEHFQKVAADMLGVQNIKEN-RPLMGTEDFSFFAE---AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 280 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~g~tD~~~~~~---~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~ 280 (309)
++.+.+.+.+++++. +.+. +. ....|+||++.++. .+|+...++|... .|+ .|.++++++..++
T Consensus 265 ~~~l~~~l~~~A~~~-~Ip~--Q~~~~~~~gtDa~~~~~~~~Gi~t~~i~iP~Ry--------~Hs-~e~~~~~D~~~~~ 332 (343)
T TIGR03106 265 DYHLTRKLIRLCQDH-GIPH--RRDVFRYYRSDAASAVEAGHDIRTALVTFGLDA--------SHG-YERTHIDALEALA 332 (343)
T ss_pred CHHHHHHHHHHHHHc-CCCc--EEEecCCCCChHHHHHHcCCCCCEEEeeccccc--------hhh-hhhccHHHHHHHH
Confidence 666788888888875 7764 33 33447999999875 3898887666544 999 9999999999999
Q ss_pred HHHHHHH
Q 021680 281 ALHASLA 287 (309)
Q Consensus 281 ~i~~~~~ 287 (309)
+++..++
T Consensus 333 ~Ll~~~~ 339 (343)
T TIGR03106 333 NLLVAYA 339 (343)
T ss_pred HHHHHHh
Confidence 9888766
No 69
>PRK09961 exoaminopeptidase; Provisional
Probab=98.53 E-value=8.3e-07 Score=79.61 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=58.5
Q ss_pred cCHHHHHHHHHHHHHhcCccccccC-CCCCCCchHHHHhh---hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 021680 204 NNKNLHEHFQKVAADMLGVQNIKEN-RPLMGTEDFSFFAE---AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 279 (309)
Q Consensus 204 ~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~g~tD~~~~~~---~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~ 279 (309)
.++.+.+.+++++++. +.+. +. ...+|+||++.+.. .+|++.+++|. .. +|+++|+++++++.++
T Consensus 254 ~~~~l~~~l~~~A~~~-~Ip~--Q~~~~~ggGTDa~~~~~~~~Giptv~ig~p~--ry------~Hs~~E~v~~~D~~~~ 322 (344)
T PRK09961 254 APPKLTAWIETVAAEI-GIPL--QADMFSNGGTDGGAVHLTGTGVPTVVMGPAT--RH------GHCAASIADCRDILQM 322 (344)
T ss_pred CCHHHHHHHHHHHHHc-CCCc--EEEecCCCcchHHHHHHhCCCCCEEEechhh--hc------ccChhheEEHHHHHHH
Confidence 4777888998888886 6554 32 23456799998765 38988875553 23 9999999999999999
Q ss_pred HHHHHHHHHHH
Q 021680 280 AALHASLATRY 290 (309)
Q Consensus 280 ~~i~~~~~~~~ 290 (309)
++++..++..+
T Consensus 323 ~~Ll~~~i~~l 333 (344)
T PRK09961 323 IQLLSALIQRL 333 (344)
T ss_pred HHHHHHHHHHc
Confidence 99999998554
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=98.52 E-value=1.8e-06 Score=77.25 Aligned_cols=76 Identities=12% Similarity=0.099 Sum_probs=60.5
Q ss_pred cCHHHHHHHHHHHHHhcCccccccCCCCCCCchHHH--Hhh-hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 021680 204 NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF--FAE-AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 280 (309)
Q Consensus 204 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~--~~~-~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~ 280 (309)
.++.+.+.+.+++++. +.+. +.....|+||++. +.. .+|++..++|... +|++.|.++++++.+++
T Consensus 263 ~~~~l~~~l~~~A~~~-~I~~--Q~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry--------~Hs~~e~i~~~D~~~~~ 331 (350)
T TIGR03107 263 MLPRMKDFLLTTAEEA-GIKY--QYYVAKGGTDAGAAHLKNSGVPSTTIGVCARY--------IHSHQTLYSIDDFLAAQ 331 (350)
T ss_pred CCHHHHHHHHHHHHHc-CCCc--EEecCCCCchHHHHHHhCCCCcEEEEccCccc--------ccChhheeeHHHHHHHH
Confidence 3667888888888885 7765 3355668999994 443 4999988666554 99999999999999999
Q ss_pred HHHHHHHHHH
Q 021680 281 ALHASLATRY 290 (309)
Q Consensus 281 ~i~~~~~~~~ 290 (309)
+++..++.++
T Consensus 332 ~Ll~~~i~~l 341 (350)
T TIGR03107 332 AFLQAIVKKL 341 (350)
T ss_pred HHHHHHHHhc
Confidence 9999998775
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=98.29 E-value=2.1e-05 Score=69.98 Aligned_cols=77 Identities=14% Similarity=0.039 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHhcCccccccCCCCC-CCchHHHHhhh---cCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 021680 205 NKNLHEHFQKVAADMLGVQNIKENRPLM-GTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 280 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-g~tD~~~~~~~---~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~~ 280 (309)
++.+.+.+.+++++. +.+.. ...++ |+||++.+... +|+.+.++|... .|++.|.++++++..+.
T Consensus 268 ~~~l~~~L~~~A~~~-~Ip~Q--~~v~~~ggTDA~a~~~~g~gvpta~Igip~ry--------~Hs~~e~~~~~D~~~~~ 336 (355)
T COG1363 268 HPKLRKFLLELAEKN-NIPYQ--VDVSPGGGTDAGAAHLTGGGVPTALIGIPTRY--------IHSPVEVAHLDDLEATV 336 (355)
T ss_pred CHHHHHHHHHHHHHc-CCCeE--EEecCCCCccHHHHHHcCCCCceEEEeccccc--------ccCcceeecHHHHHHHH
Confidence 555667777777764 66542 23333 78999998853 898887555443 99999999999999999
Q ss_pred HHHHHHHHHHHh
Q 021680 281 ALHASLATRYLL 292 (309)
Q Consensus 281 ~i~~~~~~~~~~ 292 (309)
+++..++.++..
T Consensus 337 ~Ll~~~i~~~~~ 348 (355)
T COG1363 337 KLLVAYLESLDR 348 (355)
T ss_pred HHHHHHHHhcch
Confidence 999998887653
No 72
>PRK09864 putative peptidase; Provisional
Probab=98.26 E-value=2.2e-05 Score=70.35 Aligned_cols=76 Identities=14% Similarity=0.020 Sum_probs=60.5
Q ss_pred cCHHHHHHHHHHHHHhcCccccccC-CCCCCCchHHHHhh---hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 021680 204 NNKNLHEHFQKVAADMLGVQNIKEN-RPLMGTEDFSFFAE---AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 279 (309)
Q Consensus 204 ~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~g~tD~~~~~~---~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~~ 279 (309)
.++.+.+.+.+++++. +.+. +. ....|+||++.++. .+|++..+++... .|++.|-++++++..+
T Consensus 262 ~~~~l~~~l~~~A~~~-~Ip~--Q~~~~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--------~Hs~~e~~~~~D~e~~ 330 (356)
T PRK09864 262 PNQKLVAALKSCAAHN-DLPL--QFSTMKTGATDGGRYNVMGGGRPVVALCLPTRY--------LHANSGMISKADYDAL 330 (356)
T ss_pred CCHHHHHHHHHHHHHc-CCCc--eEEEcCCCCchHHHHHHhCCCCcEEEEeeccCc--------CCCcceEeEHHHHHHH
Confidence 3667888888888875 7764 33 33447999999874 3999888777654 9999999999999999
Q ss_pred HHHHHHHHHHH
Q 021680 280 AALHASLATRY 290 (309)
Q Consensus 280 ~~i~~~~~~~~ 290 (309)
++++..++.++
T Consensus 331 ~~Ll~~~~~~l 341 (356)
T PRK09864 331 LTLIRDFLTTL 341 (356)
T ss_pred HHHHHHHHHhc
Confidence 99999998775
No 73
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=97.82 E-value=0.00066 Score=59.52 Aligned_cols=56 Identities=27% Similarity=0.293 Sum_probs=43.6
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCCCCCcceeEEe
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGALENVEAIFGL 63 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~~~~~d~~~~~ 63 (309)
+.|-..++++++.+++.|++. .++.+|+++|++.||.| .|+...... + ++|..+.+
T Consensus 132 alDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~--i-~PD~ai~v 188 (292)
T PF05343_consen 132 ALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFR--I-KPDIAIAV 188 (292)
T ss_dssp THHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHH--H--CSEEEEE
T ss_pred eCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeecccc--c-CCCEEEEE
Confidence 567789999999999999875 45599999999999999 588876544 1 45677664
No 74
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=97.74 E-value=0.00012 Score=65.00 Aligned_cols=47 Identities=26% Similarity=0.281 Sum_probs=42.2
Q ss_pred cchhhHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHc
Q 021680 3 ACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDA 51 (309)
Q Consensus 3 ~~g~~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~ 51 (309)
+||+++|++++|+++++|++. .++.+|.|+++++||.| .|+++++++
T Consensus 141 A~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 141 MDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred ccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 689999999999999999865 46789999999999999 499999876
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=96.36 E-value=0.0057 Score=49.51 Aligned_cols=45 Identities=33% Similarity=0.471 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHc
Q 021680 7 DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDA 51 (309)
Q Consensus 7 ~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~ 51 (309)
-.|++++|+.++.|++.+.+++++|.|+|..+||.| .|++++++.
T Consensus 28 asGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~ 73 (179)
T PF04389_consen 28 ASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEH 73 (179)
T ss_dssp HHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHh
Confidence 479999999999999987888999999999999999 499999863
No 76
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=91.30 E-value=0.4 Score=44.60 Aligned_cols=44 Identities=32% Similarity=0.280 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcCC
Q 021680 8 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAGA 53 (309)
Q Consensus 8 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~~ 53 (309)
.|++++|++++.|++.. ++.+|.|++...||.| .|+.+++.+..
T Consensus 231 sGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 78999999999998764 8999999999999999 59999887654
No 77
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=90.63 E-value=0.9 Score=38.50 Aligned_cols=44 Identities=18% Similarity=0.295 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHhc---cCCCCceEEEEEecCCCCC-ccHHHHHHc
Q 021680 8 AHVAMLLGAAKMLQVF---RHEIKGTIVLVFQPAEEGG-GGAKKMLDA 51 (309)
Q Consensus 8 g~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~dEE~g-~G~~~~~~~ 51 (309)
.|++++|+++++|.+. ...++++|.|.|-.+|-.| -|+++++.+
T Consensus 27 sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyD 74 (234)
T PF05450_consen 27 SGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYD 74 (234)
T ss_pred HHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHH
Confidence 6889999999999765 2468899999999999999 588888753
No 78
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=90.51 E-value=0.59 Score=44.14 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=40.0
Q ss_pred CCCeeEEEEEEecCCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHHH
Q 021680 130 LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK 180 (309)
Q Consensus 130 ~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 180 (309)
+...++|++.++++ |+++.+++++|++++++.+++.+.|++.++.
T Consensus 335 ~~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~ 379 (477)
T TIGR01893 335 LVESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKL 379 (477)
T ss_pred eEEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhh
Confidence 34578999999876 7789999999999999999999999999874
No 79
>PRK02256 putative aminopeptidase 1; Provisional
Probab=90.48 E-value=0.35 Score=45.20 Aligned_cols=73 Identities=11% Similarity=0.014 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHhcCccccccCC-C-----CCCCchHHHHhh-hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchH
Q 021680 205 NKNLHEHFQKVAADMLGVQNIKENR-P-----LMGTEDFSFFAE-AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 277 (309)
Q Consensus 205 ~~~~~~~~~~~~~~~~g~~~~~~~~-~-----~~g~tD~~~~~~-~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~ 277 (309)
+..+...+.+.+++. +.+. +.. . -.|+||.-.+.+ .+|++-.+++... +|++.|-++.+++.
T Consensus 381 ~~~~~~~i~~iA~~~-~Ip~--Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l~--------MHS~rE~~~~~D~~ 449 (462)
T PRK02256 381 NAEFVAEVRNLFNKN-NVVW--QTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALLS--------MHSPFEIASKADIY 449 (462)
T ss_pred CHHHHHHHHHHHHHc-CCCE--EEEEeecCCCCCcChHHHHHcCCCCcEEEechhhhc--------cccHHHHhhHHHHH
Confidence 566777888888875 7653 221 2 257899666664 3898876555433 99999999999999
Q ss_pred HHHHHHHHHHH
Q 021680 278 YGAALHASLAT 288 (309)
Q Consensus 278 ~~~~i~~~~~~ 288 (309)
.+++++..++.
T Consensus 450 ~~~~ll~~f~~ 460 (462)
T PRK02256 450 ETYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 80
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=89.05 E-value=1.1 Score=42.16 Aligned_cols=79 Identities=11% Similarity=-0.055 Sum_probs=57.9
Q ss_pred cCHHHHHHHHHHHHHhcCccccc--cCCCCCCCchHHHHhh---hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 021680 204 NNKNLHEHFQKVAADMLGVQNIK--ENRPLMGTEDFSFFAE---AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 278 (309)
Q Consensus 204 ~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~g~tD~~~~~~---~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~ 278 (309)
.|+.+...+++.+++. +.+.-. .....++++|.+.+.. .+|++-.+++... +|++.|-++.+++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l~--------MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQLA--------MHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhcc--------cccHHHHccHHHHHH
Confidence 3667888888888875 765321 1124556888888775 2888776454432 999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 021680 279 GAALHASLATRYL 291 (309)
Q Consensus 279 ~~~i~~~~~~~~~ 291 (309)
.++++..++..+.
T Consensus 444 ~~~l~~af~~~~~ 456 (465)
T PTZ00371 444 LVKLIKAFFTNYS 456 (465)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999887644
No 81
>PRK02813 putative aminopeptidase 2; Provisional
Probab=88.53 E-value=0.79 Score=42.57 Aligned_cols=76 Identities=11% Similarity=-0.024 Sum_probs=54.2
Q ss_pred cCHHHHHHHHHHHHHhcCcccccc--CCCCCCCchHHHHhh---hcCeeEEEeccCCCCCCCCCCCCCCCCCCCCCchHH
Q 021680 204 NNKNLHEHFQKVAADMLGVQNIKE--NRPLMGTEDFSFFAE---AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 278 (309)
Q Consensus 204 ~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~g~tD~~~~~~---~~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~~~~~ 278 (309)
++......+++++++. +.+.-.. ....+|++|.+.+.. .+|++-.+++.. . +|++.|-++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l--~------MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPML--A------MHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhc--c------cccHHHHccHHHHHH
Confidence 3566777888888875 7653211 122347888888875 288877644443 2 999999999999999
Q ss_pred HHHHHHHHHH
Q 021680 279 GAALHASLAT 288 (309)
Q Consensus 279 ~~~i~~~~~~ 288 (309)
.++++..++.
T Consensus 417 ~~~l~~~f~~ 426 (428)
T PRK02813 417 LIKALTAFFS 426 (428)
T ss_pred HHHHHHHHhc
Confidence 9999887653
No 82
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=80.09 E-value=2.5 Score=41.70 Aligned_cols=47 Identities=26% Similarity=0.254 Sum_probs=37.3
Q ss_pred hhhHHHHHHHHHHHHH---HhccCCCCceEEEEEecCCCCCc-cHHHHHHc
Q 021680 5 GHDAHVAMLLGAAKML---QVFRHEIKGTIVLVFQPAEEGGG-GAKKMLDA 51 (309)
Q Consensus 5 g~~g~~a~~l~a~~~l---~~~~~~~~~~i~~~~~~dEE~g~-G~~~~~~~ 51 (309)
+-+.|++.++..++.+ ++.|++|.++|+|+...+||.|. |+-.+++.
T Consensus 370 dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 370 DPNSGTALLLEIARALSKLKKRGWRPRRTILFASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred CCCccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchhccccccHHHHHH
Confidence 3356788787776655 56789999999999999999994 87777664
No 83
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=79.03 E-value=2.4 Score=42.12 Aligned_cols=57 Identities=26% Similarity=0.410 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCC-ccHHHHHHcC-CCCCcceeEEec
Q 021680 8 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG-GGAKKMLDAG-ALENVEAIFGLH 64 (309)
Q Consensus 8 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~~~~~~-~~~~~d~~~~~~ 64 (309)
.++|.||++++.+.+....++.+|+|+|-..||.+ .|+-.++.+. +.+.+.+++.++
T Consensus 166 ~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 166 SGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred hHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEecc
Confidence 57899999999999888888999999999999998 4666666543 223455666543
No 84
>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA. NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is
Probab=52.17 E-value=80 Score=22.14 Aligned_cols=54 Identities=6% Similarity=0.049 Sum_probs=37.1
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHH
Q 021680 157 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKV 215 (309)
Q Consensus 157 ~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 215 (309)
+.+|.++....+++.++|++.+. ....+.+.|.+...+..+..+.+|-.+++.+
T Consensus 14 ~~i~v~~~i~f~dL~~kIrdkf~-----~~~~~~iKykDEGD~iti~sq~DLd~Ai~~a 67 (86)
T cd06408 14 RYIMIGPDTGFADFEDKIRDKFG-----FKRRLKIKMKDDGDMITMGDQDDLDMAIDTA 67 (86)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhC-----CCCceEEEEEcCCCCccccCHHHHHHHHHHH
Confidence 45688999999999999998885 2347778877553344455556665555444
No 85
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=50.59 E-value=92 Score=24.51 Aligned_cols=64 Identities=13% Similarity=0.172 Sum_probs=38.5
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccC-CCCccccCHHHHHHHHHHHHHh
Q 021680 154 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKS-FYPVTVNNKNLHEHFQKVAADM 219 (309)
Q Consensus 154 ~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 219 (309)
-+++.+|+|. ....++..|++.+++....-.+.+.|.+.... ....+..|.++++...++++++
T Consensus 30 ~Ldi~~rlP~--~l~~lE~~ir~~i~~~l~RGkV~v~i~~~~~~~~~~~~~in~~l~~~y~~~l~~l 94 (159)
T PF03755_consen 30 FLDISIRLPR--ELSSLEPEIRKLIRKKLSRGKVEVSIRVERSSESAVELRINEELAKAYYEALKEL 94 (159)
T ss_pred ceeeEEeCCH--HHHHHHHHHHHHHHHhcccceEEEEEEEEECcccCCCcccCHHHHHHHHHHHHHH
Confidence 4566777775 45678888888887654443334445444322 2334455777777776666654
No 86
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=50.52 E-value=56 Score=22.56 Aligned_cols=54 Identities=11% Similarity=0.043 Sum_probs=35.0
Q ss_pred eEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHH
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNL 208 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 208 (309)
+++..+-||.+++.+..++.++|.+-++--+ ....+++..+....+.++ .+.++
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~~--e~i~LsYkde~s~~~v~l-~d~dl 61 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELPA--EHITLSYKSEASGEDVIL-SDTNM 61 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCCc--hhcEEEeccCCCCCccCc-ChHHH
Confidence 5677889999999999999999998875321 123444443334445455 44443
No 87
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=37.60 E-value=1e+02 Score=21.22 Aligned_cols=40 Identities=13% Similarity=0.108 Sum_probs=31.5
Q ss_pred eEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEE
Q 021680 152 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF 193 (309)
Q Consensus 152 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~ 193 (309)
+|++++-+|.+++.+..++.+.|.+.+...++. .++++..
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~~~--~~LSY~~ 43 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQAQR--GQLSYRA 43 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCChhh--cEEEecC
Confidence 689999999999999999999999988755433 3445443
No 88
>PHA02448 hypothetical protein
Probab=36.95 E-value=1.4e+02 Score=22.57 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=41.7
Q ss_pred ccCCCCceEEEEEecCCCCCccHHHHHHcCCCCCcceeEEecCCCCCCCceEEecccccccceeEEEEEEEcCCC--CCC
Q 021680 23 FRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGG--HAA 100 (309)
Q Consensus 23 ~~~~~~~~i~~~~~~dEE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~~~G~~~--Hs~ 100 (309)
.|..+++.|.+=|..--|. . +.|-++|-...++|-.-...|.-. ..+.|.+|+++++.|... ..-
T Consensus 21 igklpkggi~ld~~gh~~l-------t--~r~l~~dplwtwep~a~~~~glp~----~d~~gglwirlt~~g~tr~gygd 87 (192)
T PHA02448 21 IGKLPKGGITLDFLGHGYL-------T--ARFLDVDPLWTWEPFAVGDNGLPL----LDEHGGLWIRLTLCGVTRIGYGD 87 (192)
T ss_pred hccCCCCceeEEecchhhh-------h--hhhcccCccccccccccCCCCCcc----cccCCCeEEEEEEeccceeeccc
Confidence 3566778888877754432 1 112234444444332211222211 224488899999988433 222
Q ss_pred C-CCCCCCHHHHHH
Q 021680 101 I-PQHTIDPIVAAS 113 (309)
Q Consensus 101 ~-p~~g~NAi~~~~ 113 (309)
. ...|-||+..+.
T Consensus 88 ~~gk~gpnavkeai 101 (192)
T PHA02448 88 AGGKKGPNAVKEAI 101 (192)
T ss_pred cCCCcCchHHHHHH
Confidence 2 456889988764
No 89
>PRK06156 hypothetical protein; Provisional
Probab=34.62 E-value=2.5e+02 Score=26.88 Aligned_cols=24 Identities=21% Similarity=0.325 Sum_probs=20.1
Q ss_pred EEEEEEecCCcCceecCeEEEEEE
Q 021680 135 LTVAKFEGGGAFNIIPDSVTIGGT 158 (309)
Q Consensus 135 ~~i~~i~gg~~~n~vP~~~~~~~d 158 (309)
.++..++||...|+||+.|.+.+.
T Consensus 241 ~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 241 AEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred eeEEEEEcCCcCCCCCCccEEEEe
Confidence 456788999999999999998743
No 90
>PRK13562 acetolactate synthase 1 regulatory subunit; Provisional
Probab=33.60 E-value=1.6e+02 Score=20.51 Aligned_cols=56 Identities=7% Similarity=0.061 Sum_probs=35.9
Q ss_pred HHHHHHHhhcccCCCCCCeeEEEEEEecCCcCceecCeEEEEEEEecCChHHHHHHHHHHHHHHH
Q 021680 115 VIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVM 179 (309)
Q Consensus 115 ~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~n~vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 179 (309)
+++++-.++.| -.+||.++..|... .|+--++.+-+-.......+++.+++++.++
T Consensus 15 VL~Rit~lFsR-------Rg~NI~SLtvg~Te--~~~iSRmtivv~~~d~~~ieqI~kQL~Klid 70 (84)
T PRK13562 15 TLNRITSAFVR-------LQYNIDTLHVTHSE--QPGISNMEIQVDIQDDTSLHILIKKLKQQIN 70 (84)
T ss_pred HHHHHHHHHhc-------cCcCeeeEEecccC--CCCceEEEEEEeCCCHHHHHHHHHHHhCCcc
Confidence 34555555544 34677778777554 4777777777754566666777777776663
No 91
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=31.73 E-value=67 Score=29.93 Aligned_cols=108 Identities=15% Similarity=0.068 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCeeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccccccCCCCC-----CCchHHHH
Q 021680 166 SIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLM-----GTEDFSFF 240 (309)
Q Consensus 166 ~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----g~tD~~~~ 240 (309)
+-..+.+.|+++.....++.| .++.+ .+.+|.+.+-+ +.+.-.. + +++.+. ..++ ++-....+
T Consensus 434 ~dq~l~~~i~~~~~~~~e~~G--~t~~~--~~~FpglSD~S-~l~l~~s--~---~i~a~t--~N~P~~~r~~~~P~~~i 501 (553)
T COG4187 434 NDQLLHNAIKEAAAGLGEDPG--ETLIE--KPFFPGLSDMS-FLGLADS--Q---EIDAVT--SNTPGWNRLYDRPSEKI 501 (553)
T ss_pred chHHHHHHHHHHHHHhhhccC--ceeEE--eeccCcccccc-ccccccc--c---cccchh--cCCcchhhccCCCcccc
Confidence 335566667777766666655 34444 45676665543 2222211 0 222211 1111 11111223
Q ss_pred hhh-cCeeEEEeccCCCCCCCCCCCCCCCCCCCCC-chHHHHHHHHHHHHHHHhc
Q 021680 241 AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNED-ALPYGAALHASLATRYLLE 293 (309)
Q Consensus 241 ~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~v~i~-~~~~~~~i~~~~~~~~~~~ 293 (309)
+.. +|++. +||.+.+ .|.--|++... ++...-++...++..++++
T Consensus 502 ~~L~iP~iN--~Gp~GkD------~HkwtERvy~PYsF~VLP~Lvs~t~~~fL~~ 548 (553)
T COG4187 502 QALNIPTIN--LGPWGKD------FHKWTERVYKPYSFEVLPELVSETTEAFLGD 548 (553)
T ss_pred ccccCceee--cccccCc------HHHHHHHhcCCcchhhhHHHHHHHHHHHhhh
Confidence 333 78765 5998876 99999998765 5555556677777777754
No 92
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=31.60 E-value=63 Score=27.54 Aligned_cols=62 Identities=19% Similarity=0.302 Sum_probs=44.0
Q ss_pred chhhHHHHHHHHHHHHH--HhccCCCCceEEEEEecCCCC-----------Cc--cHHHHHHcCCCCCcceeEEecC
Q 021680 4 CGHDAHVAMLLGAAKML--QVFRHEIKGTIVLVFQPAEEG-----------GG--GAKKMLDAGALENVEAIFGLHV 65 (309)
Q Consensus 4 ~g~~g~~a~~l~a~~~l--~~~~~~~~~~i~~~~~~dEE~-----------g~--G~~~~~~~~~~~~~d~~~~~~~ 65 (309)
+|.||.++++..|++.+ ++.|..++|++.+.---.--- ++ +...+.+.-..+..|+++..+-
T Consensus 54 SDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 54 SDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred ecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 57799999999898866 466889999998875433221 11 5666666656667899998654
No 93
>cd06407 PB1_NLP A PB1 domain is present in NIN like proteins (NLP), a key enzyme in a process of establishment of symbiosis betweeen legumes and nitrogen fixing bacteria (Rhizobium). The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes like osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-inte
Probab=30.66 E-value=1.5e+02 Score=20.45 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=38.5
Q ss_pred EEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEec-cCCCCccccCHHHHHHHHHHHHH
Q 021680 156 GGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-KSFYPVTVNNKNLHEHFQKVAAD 218 (309)
Q Consensus 156 ~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 218 (309)
.+.+|++|..+..++.++|.+.+.- .....+.+.|.+ ...+..+..+.++..++ +.++.
T Consensus 11 ~~r~~l~~~~~~~~L~~~i~~r~~~---~~~~~f~LkY~Ddegd~v~ltsd~DL~eai-~i~~~ 70 (82)
T cd06407 11 KIRFRLPPSWGFTELKQEIAKRFKL---DDMSAFDLKYLDDDEEWVLLTCDADLEECI-DVYRS 70 (82)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHhCC---CCCCeeEEEEECCCCCeEEeecHHHHHHHH-HHHHH
Confidence 3467888999999999998887752 111467777776 33444455677766665 34444
No 94
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=30.63 E-value=2.2e+02 Score=22.11 Aligned_cols=67 Identities=13% Similarity=0.080 Sum_probs=37.0
Q ss_pred ecCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCC-eeEEEEeccCCCCccccCHHHHHHHHHHHHHhcCccc
Q 021680 149 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRC-NATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQN 224 (309)
Q Consensus 149 vP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 224 (309)
..+.+.+.+..-++-....+.+.+.|++.++.. |. .++|.+. -.|++.+| .+...-++..++ ||+.|
T Consensus 23 ~gd~V~VtIt~Ty~gcpa~e~L~~~I~~aL~~~----Gv~~V~V~i~---~~p~Wt~d-~it~~gr~~l~~-~giap 90 (146)
T TIGR02159 23 DGGGVVVKFTPTYSGCPALEVIRQDIRDAVRAL----GVEVVEVSTS---LDPPWTTD-WITEDAREKLRE-YGIAP 90 (146)
T ss_pred ECCEEEEEEEeCCCCCchHHHHHHHHHHHHHhc----CCCeEEEeEe---eCCCCChH-HCCHHHHHHHHh-cCccC
Confidence 334566666665555566677777788777642 33 2444432 13334333 344555555555 59776
No 95
>PRK02256 putative aminopeptidase 1; Provisional
Probab=28.57 E-value=89 Score=29.50 Aligned_cols=33 Identities=24% Similarity=0.163 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCCc
Q 021680 7 DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGG 43 (309)
Q Consensus 7 ~g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~ 43 (309)
-.++.+++.++..+. .+...+++++...||.|+
T Consensus 262 r~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs 294 (462)
T PRK02256 262 RVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGS 294 (462)
T ss_pred HHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCC
Confidence 355566665555432 456789999999999994
No 96
>PRK02813 putative aminopeptidase 2; Provisional
Probab=26.30 E-value=71 Score=29.82 Aligned_cols=19 Identities=42% Similarity=0.391 Sum_probs=15.9
Q ss_pred CceEEEEEecCCCCCc----cHH
Q 021680 28 KGTIVLVFQPAEEGGG----GAK 46 (309)
Q Consensus 28 ~~~i~~~~~~dEE~g~----G~~ 46 (309)
...+++++...||.|+ |+.
T Consensus 252 ~~~~~~~~~d~EEVGs~~~~GA~ 274 (428)
T PRK02813 252 DATNVLAAFDHEEVGSATKQGAD 274 (428)
T ss_pred CCeEEEEEEecCccCCCCCcccC
Confidence 6789999999999983 655
No 97
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. This CD includes the second of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. The glycine cleavage enzyme system in Escherichia coli provides one-carbon units for cellular methylation reactions. This enzyme system, encoded by the gcvTHP operon and lpd gene, catalyzes the cleavage of glycine into CO2 + NH3 and transfers a one-carbon unit to tetrahydrofolate, producing 5,10-methylenetetrahydrofolate. The gcvTHP operon is activated by the GcvA protein in response to glycine and repressed by a GcvA/GcvR interaction in the absence of glycine. It has been proposed that the co-activator glycine acts through a mechanism of de-repression by binding to GcvR and preventing GcvR from interacting with GcvA to block GcvA's activator function. Evidence also suggests that GcvR in
Probab=24.54 E-value=2e+02 Score=19.07 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=24.4
Q ss_pred cCeEEEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEE
Q 021680 150 PDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATV 191 (309)
Q Consensus 150 P~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v 191 (309)
++...+.+.+..+...+..++++.++++.++ .+.++.+
T Consensus 42 ~~~~~~~~~v~~p~~~~~~~l~~~l~~l~~~----~~~~~~~ 79 (81)
T cd04869 42 TPLFKAQATLALPAGTDLDALREELEELCDD----LNVDISL 79 (81)
T ss_pred cceEEEEEEEecCCCCCHHHHHHHHHHHHHH----hcceEEe
Confidence 3567777777877656677777777666543 3554444
No 98
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=20.63 E-value=1.8e+02 Score=27.25 Aligned_cols=23 Identities=35% Similarity=0.559 Sum_probs=19.4
Q ss_pred EEecCCcCceecCeEEEEEEEec
Q 021680 139 KFEGGGAFNIIPDSVTIGGTFRA 161 (309)
Q Consensus 139 ~i~gg~~~n~vP~~~~~~~diR~ 161 (309)
.|++|+..|.+|..|++.+-.+.
T Consensus 195 ~~~~Ge~tn~~p~~a~~~v~~~~ 217 (447)
T TIGR01887 195 SFKAGEAFNMVPDHATAVISGKE 217 (447)
T ss_pred EEeCCCcCCccCcceEEEEeccc
Confidence 46788999999999999987664
No 99
>TIGR00255 conserved hypothetical protein TIGR00255. The apparent ortholog from Aquifex aeolicus as reported is split into two consecutive reading frames.
Probab=20.58 E-value=4.7e+02 Score=23.03 Aligned_cols=64 Identities=13% Similarity=0.051 Sum_probs=37.1
Q ss_pred EEEEEEecCChHHHHHHHHHHHHHHHHHHHHhCCeeEEEEeccC-CCCccccCHHHHHHHHHHHHHh
Q 021680 154 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKS-FYPVTVNNKNLHEHFQKVAADM 219 (309)
Q Consensus 154 ~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 219 (309)
-+++.+|+|. ....+...|++.+++....-.+.+.+.+.... ....+..|.++++...++++++
T Consensus 31 ~Ldi~~rlP~--~l~~lE~~ir~~i~~~l~RGkV~v~i~~~~~~~~~~~~~id~~l~~~y~~~l~~l 95 (291)
T TIGR00255 31 FLEFKFRLPE--QFRGLELDLRELIRQYITRGKIECFLRVEYKELVPSELFLNNPLAIEAISALRDS 95 (291)
T ss_pred ceeeeeeCCH--HHHHHHHHHHHHHHHhccCceEEEEEEEEEcCcCCCCcccCHHHHHHHHHHHHHH
Confidence 4556777765 56677778888887654332334444443211 2233445777777777777665
Done!