BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021681
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 293 bits (750), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 159/196 (81%)
Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
+ R RI++TGGAGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDV
Sbjct: 86 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265
Query: 294 MCLDDGRVVSNFVAQV 309
M ++DGRVVSNF+ Q
Sbjct: 266 MHMNDGRVVSNFILQA 281
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 293 bits (750), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 159/196 (81%)
Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
+ R RI++TGGAGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDV
Sbjct: 86 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265
Query: 294 MCLDDGRVVSNFVAQV 309
M ++DGRVVSNF+ Q
Sbjct: 266 MHMNDGRVVSNFILQA 281
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 159/196 (81%)
Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
+ R RI++TGGAGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDV
Sbjct: 86 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265
Query: 294 MCLDDGRVVSNFVAQV 309
M ++DGRVVSNF+ Q
Sbjct: 266 MHMNDGRVVSNFILQA 281
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 159/196 (81%)
Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
+ R RI++TGGAGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDV
Sbjct: 87 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 146
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 147 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 206
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPR
Sbjct: 207 YGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 266
Query: 294 MCLDDGRVVSNFVAQV 309
M ++DGRVVSNF+ Q
Sbjct: 267 MHMNDGRVVSNFILQA 282
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 159/196 (81%)
Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
+ R RI++TGGAGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDV
Sbjct: 86 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265
Query: 294 MCLDDGRVVSNFVAQV 309
M ++DGRVVSNF+ Q
Sbjct: 266 MHMNDGRVVSNFILQA 281
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 290 bits (742), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 162/210 (77%)
Query: 100 SFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH 159
SF K V + R RI++TGGAGFVGSHL DKL+ G EV V+DNFFTGRK N+ H
Sbjct: 70 SFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH 129
Query: 160 HFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK 219
+ FELI HDVVEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAK
Sbjct: 130 WIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK 189
Query: 220 RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV 279
RVGA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GV
Sbjct: 190 RVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV 249
Query: 280 EVRIARIFNTYGPRMCLDDGRVVSNFVAQV 309
EVR+ARIFNT+G RM ++DGRVVSNF+ Q
Sbjct: 250 EVRVARIFNTFGSRMHMNDGRVVSNFILQA 279
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 18/183 (9%)
Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
I+VTGGAGF+GSH+VDKLI+ +VI++DN TG K+N+ NP+ E + D+ + L
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDL 56
Query: 179 LE------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR--VGAKFLLTST 230
E V+ + H A + + NPV NV+GT+N+L + ++ + +S
Sbjct: 57 DEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSG 116
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
VYG+P P E + PI S Y K E Y+R G+E I R N Y
Sbjct: 117 GAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVY 171
Query: 291 GPR 293
G R
Sbjct: 172 GER 174
>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1
SV=1
Length = 328
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 119 IVVTGGAGFVGSHLVDKLIDRGDE----VIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV 173
++VTG AGF+GS V L+ G V +D + G DNL +PR+ R D+
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 174 VEP----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLT 228
+ ++ DQ+ HLA + + ++TNV GT +L A R G A F+
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
ST EVYG LEH W P+ S Y K + + L + +H G++VR+ R N
Sbjct: 125 STDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 289 TYGPR 293
YGPR
Sbjct: 180 NYGPR 184
>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044
/ CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2
Length = 320
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGD--------EVIVIDNF-FTGRKDNLVHHFRNPRFE 167
++I+VTGGAGF+GSH V LI GD +V V+D + G NL +PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFS 59
Query: 168 LIRHDVVEPILLEVDQIYH--LACPASPVHYKYNPVKT---IKTNVMGTLNMLGLAKR-- 220
+R D+ + L+E H +A A+ H + V + + +N++GT +L A R
Sbjct: 60 FVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHH 119
Query: 221 VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVE 280
+G +FL ST EVYG W +P+ S Y K ++ L + YH+ G++
Sbjct: 120 IG-RFLHVSTDEVYGS-----IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMD 173
Query: 281 VRIARIFNTYGPR 293
V + R N YGPR
Sbjct: 174 VVVTRCSNNYGPR 186
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
+R +VTG AGF+GS LVD+L+ G V+ +DNF TGR NL H N + D+V
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTA 60
Query: 177 ILLEV------DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
L + + ++HLA +P NV+GT+ + A++ G + ++ ++
Sbjct: 61 DLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTS 120
Query: 231 S--EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
S +YG P E+P ET P S Y GK E + G++ N
Sbjct: 121 SGGSIYGTPPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPAN 175
Query: 289 TYGPR 293
YGPR
Sbjct: 176 VYGPR 180
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 13/185 (7%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
+R +VTG AGF+GS LVD+L+ G V+ +D+ +GR +NL + +FE ++ D+V+
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENSDKFEFVKADIVDA 60
Query: 177 IL------LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
L + + I+HLA S +P NV+GT+ + A+ G + ++ ++
Sbjct: 61 DLTGLLAEFKPEVIFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVRKVVHTS 120
Query: 231 S--EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
S VYG P +P E P+ S Y GK E Y ++ N
Sbjct: 121 SGGSVYGTPPAYPTSEDM-----PVNPASPYAAGKVAGEVYLNMYRNLYDLDCSHIAPAN 175
Query: 289 TYGPR 293
YGPR
Sbjct: 176 VYGPR 180
>sp|O06329|RMLB_MYCTU dTDP-glucose 4,6-dehydratase OS=Mycobacterium tuberculosis GN=rmlB
PE=1 SV=1
Length = 331
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNF-FTGRKDNLVH---HFRNPRFELIR 170
+R++VTGGAGF+G++ V + D V V+D + GR+++L R + ++
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDAIRLVQGDITD 60
Query: 171 HDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
++V ++ E D + H A + + NP + TNV+GT +L +R G + ST
Sbjct: 61 AELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHIST 120
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
EVYGD LE + + P S Y K A+ L + R GV I+ N Y
Sbjct: 121 DEVYGD-LELDDRARF-TESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSNNY 178
Query: 291 GP 292
GP
Sbjct: 179 GP 180
>sp|P21977|GALE_STRTR UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3
SV=1
Length = 332
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE 175
+ I+V GGAG++GSH+VD+L+++G E V+V+D+ TG + + + +L D +
Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60
Query: 176 PILLE---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTS 231
+ E VD + H A + P+K N G + +L + G K+++ +ST+
Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120
Query: 232 EVYGDPLEHPQKETYWGN-VNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
YG P E P ET N +NP Y E K ET+ + G++ R FN
Sbjct: 121 ATYGIPEEIPILETTPQNPINP------YGESKLMMETIMKWSDQAYGIKYVPLRYFNVA 174
Query: 291 GPRMCL 296
G + +
Sbjct: 175 GANLMV 180
>sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3
SV=1
Length = 672
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 103 AKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHF 161
AK G + + RRR R+++ G GF+G+HL ++L+ D E+ +D D +
Sbjct: 308 AKLGNLASRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFL 363
Query: 162 RNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML 215
+PRF + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 364 GDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIV 423
Query: 216 GLAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMD 272
R + + STSEVYG D E ++T V PI +R Y K+ + +
Sbjct: 424 RDCVRYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 482
Query: 273 YHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ LD R+ S+
Sbjct: 483 YGAKNGLRFTLFRPFNWMGPRLDTLDAARIGSS 515
>sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=arnA PE=3 SV=1
Length = 673
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 103 AKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHF 161
A+ G + + RRR R+++ G GF+G+HL ++L+ D E+ +D D +
Sbjct: 309 ARLGNLASRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFL 364
Query: 162 RNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML 215
+PRF + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 365 GDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIV 424
Query: 216 GLAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMD 272
R + + STSEVYG D E ++T V PI +R Y K+ + +
Sbjct: 425 RDCVRYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 483
Query: 273 YHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ LD R+ S+
Sbjct: 484 YGAKNGLRFTLFRPFNWMGPRLDTLDAARIGSS 516
>sp|Q8Z540|ARNA_SALTI Bifunctional polymyxin resistance protein ArnA OS=Salmonella typhi
GN=arnA PE=3 SV=1
Length = 660
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA R P G+RR+R+++ G GF+G+HL ++L+D + EV +D L+H
Sbjct: 301 GACLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B5BCP6|ARNA_SALPK Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1
Length = 660
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA R P G+RR+R+++ G GF+G+HL ++L+D + EV +D L+H
Sbjct: 301 GACLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|Q5PNA6|ARNA_SALPA Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=arnA PE=3
SV=1
Length = 660
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA R P G+RR+R+++ G GF+G+HL ++L+D + EV +D L+H
Sbjct: 301 GACLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|O52325|ARNA_SALTY Bifunctional polymyxin resistance protein ArnA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=arnA PE=2 SV=1
Length = 660
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B5FNT9|ARNA_SALDC Bifunctional polymyxin resistance protein ArnA OS=Salmonella dublin
(strain CT_02021853) GN=arnA PE=3 SV=1
Length = 660
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B5EZH8|ARNA_SALA4 Bifunctional polymyxin resistance protein ArnA OS=Salmonella agona
(strain SL483) GN=arnA PE=3 SV=1
Length = 660
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B4TBG6|ARNA_SALHS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
heidelberg (strain SL476) GN=arnA PE=3 SV=1
Length = 660
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B5RCC4|ARNA_SALG2 Bifunctional polymyxin resistance protein ArnA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=arnA PE=3
SV=1
Length = 660
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B4TPI2|ARNA_SALSV Bifunctional polymyxin resistance protein ArnA OS=Salmonella
schwarzengrund (strain CVM19633) GN=arnA PE=3 SV=1
Length = 660
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B5R272|ARNA_SALEP Bifunctional polymyxin resistance protein ArnA OS=Salmonella
enteritidis PT4 (strain P125109) GN=arnA PE=3 SV=1
Length = 660
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|C0Q069|ARNA_SALPC Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi C (strain RKS4594) GN=arnA PE=3 SV=1
Length = 660
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|B4SYX1|ARNA_SALNS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
newport (strain SL254) GN=arnA PE=3 SV=1
Length = 660
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|A9N5B2|ARNA_SALPB Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=arnA PE=3
SV=1
Length = 660
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
Y G+ + R FN GPR+ L+ R+ S+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSS 509
>sp|P55462|RFBB_RHISN Probable dTDP-glucose 4,6-dehydratase OS=Rhizobium sp. (strain
NGR234) GN=NGR_a03580 PE=3 SV=1
Length = 350
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF-FTGRKDNL--VHHFRNPRFELIRHDV 173
+RI+VTGGAGF+GS LV L+ EV+ +D + G +L V RN RF +R D+
Sbjct: 1 MRILVTGGAGFIGSALVRYLVSINAEVLNVDKLTYAGNLASLKPVEGLRNYRF--LRADI 58
Query: 174 VEPILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--- 223
+ + + + D + HLA + ++TNV GT ML A++ +
Sbjct: 59 CDRVAINEAFETFQPDYVIHLAAESHVDRSITGADDFVQTNVNGTFTMLETARQYWSNLS 118
Query: 224 -------KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG 276
K L ST EVYG + Q E V+P S Y K ++ + R
Sbjct: 119 QNRKAFFKMLHVSTDEVYGSLGDRGQFE----EVSPYDPSSPYSASKAASDHFATAWQRT 174
Query: 277 AGVEVRIARIFNTYGP 292
G+ V I+ N YGP
Sbjct: 175 YGLPVVISNCSNNYGP 190
>sp|P0C0R6|ARNA_SALCH Bifunctional polymyxin resistance protein ArnA OS=Salmonella
choleraesuis (strain SC-B67) GN=arnA PE=3 SV=1
Length = 660
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
GA+ R P G+RR+R+++ G GF+G+HL ++L++ + EV +D L+H
Sbjct: 301 GARLNRPPATSGKRRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLH- 359
Query: 161 FRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM 214
PRF + D+ +E + + D + L A+P+ Y NP++ + + L +
Sbjct: 360 ---PRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRI 416
Query: 215 LGLAKRVGAKFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT 270
+ + + + STSEVYG + + G VN R Y K+ + +
Sbjct: 417 IRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVI 474
Query: 271 MDYHRGAGVEVRIARIFNTYGPRM 294
Y G+ + R FN GPR+
Sbjct: 475 WAYGEKEGLRFTLFRPFNWMGPRL 498
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
+ I V GGAG++GSH V +L+ G++V+V+DN TG + + +PR + D+ +
Sbjct: 1 MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAV-----DPRARFYQGDIRDY 55
Query: 177 ILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLT 228
L ++D I H A + +P+K N G + +L + G K + +
Sbjct: 56 HFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFS 115
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
ST+ YG+P + P KET +P + Y E K E + G++ R FN
Sbjct: 116 STAATYGEPKQVPIKET-----DPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRYFN 170
Query: 289 TYGPRMCLDDGRV 301
G + DG +
Sbjct: 171 VAG---AMPDGSI 180
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 119 IVVTGGAGFVGSHLVDKLIDRGDE--VIVIDNF-------FTGRKDNLVHHFRNPRFELI 169
I+VTG AGF+G HL L+D ++ VI IDN +++ ++ ++ N F +
Sbjct: 6 ILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIKL 65
Query: 170 ----RHDVVEPIL-LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A 223
D+VE + E+D I HL A + NP IK+N MGTLN+ A+R
Sbjct: 66 DFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIE 125
Query: 224 KFLLTSTSEVYGDPLEHPQKETYWGNVN-PIGERSCYDEGKRTAETLTMDYHRGAGVEVR 282
K + S+S VYG + P E V+ PI S Y KR+ E + YH G+++
Sbjct: 126 KVVYASSSSVYGGNRKIPFSED--DRVDKPI---SLYASTKRSNELMAHVYHHLYGIKMI 180
Query: 283 IARIFNTYG 291
R F YG
Sbjct: 181 GLRFFTVYG 189
>sp|A8GDR7|ARNA_SERP5 Bifunctional polymyxin resistance protein ArnA OS=Serratia
proteamaculans (strain 568) GN=arnA PE=3 SV=1
Length = 660
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLI--DRGDEVIVIDNFFTGRKDNLVHHFRNPRF 166
P + +RR R+++ G GF+G+HL ++L+ DR D I G D + NPRF
Sbjct: 308 PNAVMKRRTRVLILGVNGFIGNHLTERLLRDDRYD----IYGLDIG-SDAISRFLGNPRF 362
Query: 167 ELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR 220
+ D+ +E + + D I L A+P+ Y NP++ + + L ++ +
Sbjct: 363 HFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVK 422
Query: 221 VGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDYHRGA 277
+ + STSEVYG D E + + V PI +R Y K+ + + Y
Sbjct: 423 YNKRIIFPSTSEVYGMCDDKEFDEDHSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKE 481
Query: 278 GVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 482 GLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1
SV=1
Length = 460
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 35/198 (17%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE- 175
L ++VTG AGFVGSH L RGD V+ DNF + + +P + R +++E
Sbjct: 112 LSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNF---------NDYYDPSLKRARQELLEK 162
Query: 176 -------------PILLEV------DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
P+L ++ I HLA A + NP I +N+ G +N+L
Sbjct: 163 QQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLE 222
Query: 217 LAKRVGAK--FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYH 274
+AK + + S+S VYG E+P E + + P S Y K+ E + Y+
Sbjct: 223 VAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTD-QPA---SLYAATKKAGEEIAHTYN 278
Query: 275 RGAGVEVRIARIFNTYGP 292
G+ + R F YGP
Sbjct: 279 HIYGLSLTGLRFFTVYGP 296
>sp|A0QSK6|RMLB_MYCS2 dTDP-glucose 4,6-dehydratase OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=rmlB PE=1 SV=1
Length = 331
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 117 LRIVVTGGAGFVGSHLVDKLI--DRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV 173
+R++VTGGAGF+G++ V + R + V+D + G +++L R L++ D+
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAP--VADRIRLVQGDI 58
Query: 174 VEPILL-----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT 228
+ L+ E D + H A + +P + +NV+GT +L +R +
Sbjct: 59 TDAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 229 STSEVYGD-PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
ST EVYGD L++P + + P S Y K A+ L + R GV I+
Sbjct: 119 STDEVYGDLELDNPAR---FNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCS 175
Query: 288 NTYGP 292
N YGP
Sbjct: 176 NNYGP 180
>sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2
SV=1
Length = 330
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
++++V GGAG++GSH V +L+ G++V+V+D +TG + + +P+ + + D+ +
Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVLVLDALYTGHRKAV-----DPKAKFYQGDIEDT 55
Query: 177 ILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-T 228
L+ ++D + H A + P+K NV G +++L K+L+ +
Sbjct: 56 FLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVKYLVFS 115
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
S++ YG P + P E P+ + Y E K E + + G++ R FN
Sbjct: 116 SSAATYGIPKKLPITED-----TPLNPINPYGETKMMMEKIMAWADKADGIKYTALRYFN 170
Query: 289 TYG 291
G
Sbjct: 171 VAG 173
>sp|P96995|GALE_STRMU UDP-glucose 4-epimerase OS=Streptococcus mutans serotype c (strain
ATCC 700610 / UA159) GN=galE PE=3 SV=2
Length = 333
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 117 LRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE 175
+ I+V GGAG++GSH+VD+LI++G +EV+V+D+ TG + + + + +L + +
Sbjct: 1 MAILVLGGAGYIGSHMVDRLIEKGEEEVVVVDSLVTGHRAAVHPAAKFYQGDLADREFMS 60
Query: 176 PILLE---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTS 231
+ E VD + H A + P+K N G + +L + G K+++ +ST+
Sbjct: 61 MVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVKYIVFSSTA 120
Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
YG P E P KET P + Y E K ET+ R G++ R FN G
Sbjct: 121 ATYGIPDEIPIKET-----TPQRPINPYGESKLMMETIMKWSDRAYGIKFVPLRYFNVAG 175
Query: 292 PR 293
+
Sbjct: 176 AK 177
>sp|A8FRR2|ARNA_SHESH Bifunctional polymyxin resistance protein ArnA OS=Shewanella
sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1
Length = 660
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
RR ++++ G GF+G+HL +L+D G E+ +D + H +P F + D+
Sbjct: 316 RRQKVLIMGANGFIGNHLTKRLLDDGKYEIYAMDM----SSSQIEQHLSHPDFHFVEGDI 371
Query: 174 ------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL 227
+E + + D + L A+P+ Y NP++ + + L ++ + + +
Sbjct: 372 TIHNEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIF 431
Query: 228 TSTSEVYGDPL-EHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
STSEVYG E ++T PI +R Y K+ + + Y + ++ + R
Sbjct: 432 PSTSEVYGMCTDEEFDEDTSPLITGPINRQRWIYSTSKQLLDRVIWAYGKKDNLKFTLFR 491
Query: 286 IFNTYGPRM-CLDDGRVVSN 304
FN GPR+ L+ RV S+
Sbjct: 492 PFNWMGPRLDSLNSARVGSS 511
>sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis
(strain HI4320) GN=arnA PE=3 SV=1
Length = 660
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
+RR R+++ G GF+G+HL ++L+ G+ I + + + + NPRF I DV
Sbjct: 313 KRRQRVLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFIG---NPRFHFIEGDV 369
Query: 174 ------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL 227
+E + + D I L A+P+ Y NP++ + + L ++ + + +
Sbjct: 370 SIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIF 429
Query: 228 TSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
STSEVYG D E + + V PI +R Y K+ + + Y G++ +
Sbjct: 430 PSTSEVYGMCDDKEFDEDNSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLF 488
Query: 285 RIFNTYGPRM-CLDDGRVVSN 304
R FN GPR+ L+ R+ S+
Sbjct: 489 RPFNWMGPRLDNLNSARIGSS 509
>sp|A0KGY6|ARNA_AERHH Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=arnA PE=3 SV=1
Length = 663
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 115 RRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
R R+++ G GF+G+HL ++L+ D G EV +D + D + H P F + D+
Sbjct: 316 RLTRVLILGVNGFIGNHLTERLLQDGGYEVYGLD-IGSSAVDRFIGH---PNFHFVEGDI 371
Query: 174 ------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL 227
+E + + D I L A+P+ Y NP++ + + L ++ + + +
Sbjct: 372 SIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIF 431
Query: 228 TSTSEVYGDPLEHP-QKETYWGNVNPIG-ERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
STSEVYG +H +++ V PI +R Y K+ + + Y + G+ + R
Sbjct: 432 PSTSEVYGMCDDHSFDEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFR 491
Query: 286 IFNTYGPRM-CLDDGRVVSN 304
FN GPR+ LD R+ S+
Sbjct: 492 PFNWMGPRLDSLDSARIGSS 511
>sp|A4TIM4|ARNA_YERPP Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
(strain Pestoides F) GN=arnA PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q1CIH7|ARNA_YERPN Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=arnA PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|A9R093|ARNA_YERPG Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Angola) GN=arnA PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q8ZDX8|ARNA_YERPE Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
GN=arnA PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q1C742|ARNA_YERPA Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=arnA PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|Q59083|EXOB_AZOBR UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3
SV=1
Length = 348
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
R++VTGGAG++GSH++ L D G + ID+ GR++ + L+ D+
Sbjct: 10 RVLVTGGAGYIGSHVLHALTDAGIPAVTIDDLSAGRREAI-----PAAVPLVEGDIGSAE 64
Query: 178 LLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTS 229
LL+ VD + H A P+ + N +L +LG R G K + +S
Sbjct: 65 LLDRVMRDHRVDAVMHFAGSIVVPESVVKPLDYYRNNTANSLTLLGACLRAGIDKVVFSS 124
Query: 230 TSEVYGDPLEHPQKETYWG-NVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
T+ VYG P P +E +NP Y K E + D G+ I R FN
Sbjct: 125 TAAVYGAPESVPIREDAPTVPINP------YGASKLMTEQMLRDAGAAHGLRSVILRYFN 178
Query: 289 TYG 291
G
Sbjct: 179 VAG 181
>sp|Q93PD8|ARNA_YERPS Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=arnA
PE=2 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|B2K5L3|ARNA_YERPB Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=arnA
PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|A7FHH4|ARNA_YERP3 Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=arnA PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
>sp|B1JJ30|ARNA_YERPY Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=arnA
PE=3 SV=1
Length = 667
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 104 KTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFR 162
+ G P +RR R+++ G GF+G+HL ++L+ D EV +D G D +
Sbjct: 303 RLGNKPSNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IG-SDAISRFLG 358
Query: 163 NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
NP F + D+ +E + + D I L A+P+ Y NP++ + + L ++
Sbjct: 359 NPAFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVR 418
Query: 217 LAKRVGAKFLLTSTSEVYG--DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDY 273
+ + + STSEVYG D E ++T V PI +R Y K+ + + Y
Sbjct: 419 DCVKYNKRIVFPSTSEVYGMCDDKEF-DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAY 477
Query: 274 HRGAGVEVRIARIFNTYGPRM-CLDDGRVVSN 304
G++ + R FN GPR+ LD R+ S+
Sbjct: 478 GVKEGLKFTLFRPFNWMGPRLDNLDAARIGSS 509
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,397,399
Number of Sequences: 539616
Number of extensions: 5409817
Number of successful extensions: 12517
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 11772
Number of HSP's gapped (non-prelim): 527
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)