BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021682
(309 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 148/268 (55%), Gaps = 11/268 (4%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLI 63
+ +GRL +G +AVKRL QG E +F+ EV++ + H NLL + G C E++L+
Sbjct: 54 VYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 113
Query: 64 YDYMPNKSLDFYIFDLRRRY----LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y YM N S+ LR R LDW R I G +GL YL ++ + I+HRD+KA
Sbjct: 114 YPYMANGSVASC---LRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 170
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
+NILLD E + DFG+A+ + + GT G++ PEY+ G S K DV+ Y
Sbjct: 171 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGY 229
Query: 180 GVLLLQILGGKRTS--CYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRC 237
GV+LL+++ G+R ++ + LL++ GL K + +D L + ++ +
Sbjct: 230 GVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL 289
Query: 238 MQVALLCVQENAADRPTMLEILVMLKSE 265
+QVALLC Q + +RP M E++ ML+ +
Sbjct: 290 IQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 11/268 (4%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLI 63
+ +GRL +G +AVKRL QG E +F+ EV++ + H NLL + G C E++L+
Sbjct: 46 VYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 105
Query: 64 YDYMPNKSLDFYIFDLRRRY----LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y YM N S+ LR R LDW R I G +GL YL ++ + I+HRD+KA
Sbjct: 106 YPYMANGSVASC---LRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
+NILLD E + DFG+A+ + + G G++ PEY+ G S K DV+ Y
Sbjct: 163 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGY 221
Query: 180 GVLLLQILGGKRTS--CYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRC 237
GV+LL+++ G+R ++ + LL++ GL K + +D L + ++ +
Sbjct: 222 GVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL 281
Query: 238 MQVALLCVQENAADRPTMLEILVMLKSE 265
+QVALLC Q + +RP M E++ ML+ +
Sbjct: 282 IQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 149/260 (57%), Gaps = 4/260 (1%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+ +G L +G ++A+KR + S QG+EEFE E++ + +H +L+ ++G C +R E +LIY
Sbjct: 55 VYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY 114
Query: 65 DYMPNKSLDFYIFDLRRRYL-LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL 123
YM N +L +++ + + W R+ I G +GL YL + I+HRD+K+ NIL
Sbjct: 115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINIL 171
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLL 183
LD PKI+DFG+++ T+ + + GT GY+ PEY KG + K DVYS+GV+L
Sbjct: 172 LDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
Query: 184 LQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
++L + P E +NL E+A NG+ + +D +L D L + A+
Sbjct: 232 FEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVK 291
Query: 244 CVQENAADRPTMLEILVMLK 263
C+ ++ DRP+M ++L L+
Sbjct: 292 CLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 149/261 (57%), Gaps = 6/261 (2%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+ +G L +G ++A+KR + S QG+EEFE E++ + +H +L+ ++G C +R E +LIY
Sbjct: 55 VYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY 114
Query: 65 DYMPNKSLDFYIF--DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
YM N +L +++ DL + W R+ I G +GL YL + I+HRD+K+ NI
Sbjct: 115 KYMENGNLKRHLYGSDLPTMSM-SWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINI 170
Query: 123 LLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVL 182
LLD PKI+DFG+++ T+ + GT GY+ PEY KG + K DVYS+GV+
Sbjct: 171 LLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVV 230
Query: 183 LLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVAL 242
L ++L + P E +NL E+A NG+ + +D +L D L + A+
Sbjct: 231 LFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAV 290
Query: 243 LCVQENAADRPTMLEILVMLK 263
C+ ++ DRP+M ++L L+
Sbjct: 291 KCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 137/260 (52%), Gaps = 10/260 (3%)
Query: 12 NGQEMAVKRLSR----TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
N +AVK+L+ T+ + ++F+ E+K+ A+ QH NL+ +LG + ++ L+Y YM
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
PN SL + L L W R I +G G+ +L E + +HRD+K++NILLD
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 169
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
KISDFG+ARA K RIVGT Y+ PE +R G + K D+YS+GV+LL+I+
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEII 228
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
G + + L L + ++ID ++D+ S + VA C+ E
Sbjct: 229 TGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHE 286
Query: 248 NAADRPTMLEILVMLKSETA 267
RP + ++ +L+ TA
Sbjct: 287 KKNKRPDIKKVQQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 137/260 (52%), Gaps = 10/260 (3%)
Query: 12 NGQEMAVKRLSR----TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
N +AVK+L+ T+ + ++F+ E+K+ A+ QH NL+ +LG + ++ L+Y YM
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
PN SL + L L W R I +G G+ +L E + +HRD+K++NILLD
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 169
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
KISDFG+ARA K RIVGT Y+ PE +R G + K D+YS+GV+LL+I+
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEII 228
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
G + + L L + ++ID ++D+ S + VA C+ E
Sbjct: 229 TGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHE 286
Query: 248 NAADRPTMLEILVMLKSETA 267
RP + ++ +L+ TA
Sbjct: 287 KKNKRPDIKKVQQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 137/260 (52%), Gaps = 10/260 (3%)
Query: 12 NGQEMAVKRLSR----TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
N +AVK+L+ T+ + ++F+ E+K+ A+ QH NL+ +LG + ++ L+Y YM
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
PN SL + L L W R I +G G+ +L E + +HRD+K++NILLD
Sbjct: 107 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 163
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
KISDFG+ARA K RIVGT Y+ PE +R G + K D+YS+GV+LL+I+
Sbjct: 164 FTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEII 222
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
G + + L L + ++ID ++D+ S + VA C+ E
Sbjct: 223 TGLPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHE 280
Query: 248 NAADRPTMLEILVMLKSETA 267
RP + ++ +L+ TA
Sbjct: 281 KKNKRPDIKKVQQLLQEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 12 NGQEMAVKRLSR----TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
N +AVK+L+ T+ + ++F+ E+K+ A+ QH NL+ +LG + ++ L+Y Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
PN SL + L L W R I +G G+ +L E + +HRD+K++NILLD
Sbjct: 104 PNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 160
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
KISDFG+ARA K RIVGT Y PE +R G + K D+YS+GV+LL+I+
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEII 219
Query: 188 GG-KRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQ 246
G + P L L + ++ID +D+ S + VA C+
Sbjct: 220 TGLPAVDEHREPQ--LLLDIKEEIEDEEKTIEDYIDKKXNDADST-SVEAXYSVASQCLH 276
Query: 247 ENAADRPTMLEILVMLKSETA 267
E RP + ++ +L+ TA
Sbjct: 277 EKKNKRPDIKKVQQLLQEXTA 297
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 132/269 (49%), Gaps = 36/269 (13%)
Query: 5 ICQGRL--PNGQEM--AVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE 59
+C GRL P +E+ A+K L + + +F +E + + H N++ + G+ T+ +
Sbjct: 45 VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP 104
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
M+I +YM N SLD ++ R+ + V ++ GI G+ YL S+++ VHRDL A
Sbjct: 105 VMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMSAVHRDLAA 159
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKY 174
NIL++ + K+SDFGM+R D A T R G +P PE + ++
Sbjct: 160 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIAYRKFTSAS 215
Query: 175 DVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWK 233
DV+SYG+++ +++ G+R + + +E Y L +D + +
Sbjct: 216 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PPPMDCPIALHQ 265
Query: 234 LMRCMQVALLCVQENAADRPTMLEILVML 262
LM L C Q+ +DRP +I+ ML
Sbjct: 266 LM------LDCWQKERSDRPKFGQIVNML 288
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 132/269 (49%), Gaps = 36/269 (13%)
Query: 5 ICQGRL--PNGQEM--AVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE 59
+C GRL P +E+ A+K L + + +F +E + + H N++ + G+ T+ +
Sbjct: 24 VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP 83
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
M+I +YM N SLD ++ R+ + V ++ GI G+ YL S+++ VHRDL A
Sbjct: 84 VMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMSYVHRDLAA 138
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKY 174
NIL++ + K+SDFGM+R D A T R G +P PE + ++
Sbjct: 139 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIAYRKFTSAS 194
Query: 175 DVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWK 233
DV+SYG+++ +++ G+R + + +E Y L +D + +
Sbjct: 195 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PPPMDCPIALHQ 244
Query: 234 LMRCMQVALLCVQENAADRPTMLEILVML 262
LM L C Q+ +DRP +I+ ML
Sbjct: 245 LM------LDCWQKERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 132/269 (49%), Gaps = 36/269 (13%)
Query: 5 ICQGRL--PNGQEM--AVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE 59
+C GRL P +E+ A+K L + + +F +E + + H N++ + G+ T+ +
Sbjct: 30 VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP 89
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
M+I +YM N SLD ++ R+ + V ++ GI G+ YL S+++ VHRDL A
Sbjct: 90 VMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMSYVHRDLAA 144
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKY 174
NIL++ + K+SDFGM+R D A T R G +P PE + ++
Sbjct: 145 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIAYRKFTSAS 200
Query: 175 DVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWK 233
DV+SYG+++ +++ G+R + + +E Y L +D + +
Sbjct: 201 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PPPMDCPIALHQ 250
Query: 234 LMRCMQVALLCVQENAADRPTMLEILVML 262
LM L C Q+ +DRP +I+ ML
Sbjct: 251 LM------LDCWQKERSDRPKFGQIVNML 273
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG+AR D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P +E+ V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 38 VCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIHLEGVVTKSK 96
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI+ G+ YL S++ VHRDL
Sbjct: 97 PVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYL---SDMGYVHRDLA 151
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 152 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIAFRKFTSA 207
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG+++ +++ G+R + + +E Y L S +D ++ +
Sbjct: 208 SDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL----------PSPMDCPAALY 257
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q+ RP EI+ ML
Sbjct: 258 QLM------LDCWQKERNSRPKFDEIVNML 281
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 13 GQEMAVKRLSRTS----HQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
G E+AVK Q +E E KL A L+H N++ + G+C + L+ ++
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 69 NKSLDFYIFDLR--RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY 126
L+ + R L++W + I +G+ YL + + + I+HRDLK+SNIL+
Sbjct: 90 GGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIVPIIHRDLKSSNILILQ 143
Query: 127 EMNP--------KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
++ KI+DFG+AR + + G Y ++ PE +R ++S DV+S
Sbjct: 144 KVENGDLSNKILKITDFGLAREWHR----TTKMSAAGAYAWMAPEVIRASMFSKGSDVWS 199
Query: 179 YGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKN 214
YGVLL ++L G+ P ++ L AYG+ N
Sbjct: 200 YGVLLWELLTGEV------PFRGIDGLAVAYGVAMN 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGFVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 32 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 90
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 91 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 145
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 201
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 251
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 252 QLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 49 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 107
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 108 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 162
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 163 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 218
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 219 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 268
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 269 QLM------LDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG+ R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 59 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 117
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 118 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 172
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 173 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 228
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 229 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 278
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 279 QLM------LDCWQKDRNNRPKFEQIVSIL 302
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ +YM N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ + M N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGAVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 32 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 90
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ + M N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 91 PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 145
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 201
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 251
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 252 QLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 45/287 (15%)
Query: 2 SVAICQGRL--PNGQEM--AVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQ 56
S +C GRL P +++ A+K L + + +F +E + + H N++ + G+ T+
Sbjct: 62 SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121
Query: 57 REEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
M++ +YM N SLD ++ ++ + V ++ G+ G+ YL S+L VHRD
Sbjct: 122 GRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLGYVHRD 176
Query: 117 LKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYS 171
L A N+L+D + K+SDFG++R D A T T G +P PE + +S
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT----TTGGKIPIRWTAPEAIAFRTFS 232
Query: 172 MKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSA 231
DV+S+GV++ ++L YG N+ + SS+++
Sbjct: 233 SASDVWSFGVVMWEVLA-------YGERPYWNMTN------------RDVISSVEEGYRL 273
Query: 232 WKLMRC----MQVALLCVQENAADRPTMLEILVMLKSETADIKTPKK 274
M C Q+ L C ++ A RP +I+ +L A I++P+
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD---ALIRSPES 317
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P+ +E++V ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ + M N SLD ++ ++ + V ++ GI G+ YL S++ VHRDL
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D A T R G +P PE + ++
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSA 230
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG++L +++ G+R + + ++ Y L +D ++ +
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPMDCPAALY 280
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q++ +RP +I+ +L
Sbjct: 281 QLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 5/177 (2%)
Query: 12 NGQEMAVKRLSRTSHQG--LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
+G ++AVK L + EF EV + RL+H N++ +G TQ ++ +Y+
Sbjct: 59 HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
SL + R LD R R+ + + +G+ YL N IVHRDLK+ N+L+D +
Sbjct: 119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRDLKSPNLLVDKKYT 177
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K+ DFG++R K + GT ++ PE +R + K DVYS+GV+L ++
Sbjct: 178 VKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 45/287 (15%)
Query: 2 SVAICQGRL--PNGQEM--AVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQ 56
S +C GRL P +++ A+K L + + +F +E + + H N++ + G+ T+
Sbjct: 62 SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121
Query: 57 REEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
M++ +YM N SLD ++ ++ + V ++ G+ G+ YL S+L VHRD
Sbjct: 122 GRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLGYVHRD 176
Query: 117 LKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYS 171
L A N+L+D + K+SDFG++R D A T T G +P PE + +S
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT----TTGGKIPIRWTAPEAIAFRTFS 232
Query: 172 MKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSA 231
DV+S+GV++ ++L YG N+ + SS+++
Sbjct: 233 SASDVWSFGVVMWEVLA-------YGERPYWNMTN------------RDVISSVEEGYRL 273
Query: 232 WKLMRC----MQVALLCVQENAADRPTMLEILVMLKSETADIKTPKK 274
M C Q+ L C ++ A RP +I+ +L A I++P+
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD---ALIRSPES 317
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 12 NGQEMAVKRLSRTSHQG--LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
+G ++AVK L + EF EV + RL+H N++ +G TQ ++ +Y+
Sbjct: 59 HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
SL + R LD R R+ + + +G+ YL N IVHR+LK+ N+L+D +
Sbjct: 119 GSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYT 177
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K+ DFG++R K ++ GT ++ PE +R + K DVYS+GV+L ++
Sbjct: 178 VKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 34/269 (12%)
Query: 5 ICQG--RLPNGQEM--AVKRL-SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE 59
+C G +LP +E+ A+K L S + + +F +E + + H N++ + G+ T+
Sbjct: 49 VCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP 108
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
M+I ++M N SLD ++ ++ + V ++ GI G+ YL +++ VHRDL A
Sbjct: 109 VMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMNYVHRDLAA 163
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKY 174
NIL++ + K+SDFG++R D + +G G +P PE ++ ++
Sbjct: 164 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEAIQYRKFTSAS 221
Query: 175 DVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWK 233
DV+SYG+++ +++ G+R + +N +E Y L +D S+ +
Sbjct: 222 DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL----------PPPMDCPSALHQ 271
Query: 234 LMRCMQVALLCVQENAADRPTMLEILVML 262
LM L C Q++ RP +I+ L
Sbjct: 272 LM------LDCWQKDRNHRPKFGQIVNTL 294
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 22/260 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G N ++A+K + R E+F E ++ +L H L+ + G+C ++ L++++M
Sbjct: 26 GYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 84
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
+ L Y+ +R L T + + + +G+ YL+E S ++HRDL A N L+
Sbjct: 85 EHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGEN 139
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFGM R D+ ++TG + PE YS K DV+S+GVL+ ++
Sbjct: 140 QVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ P E+ + N E +E I + Q+ C +E
Sbjct: 199 SEGKI-----PYENRS----------NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 243
Query: 248 NAADRPTMLEILVMLKSETA 267
DRP +L L + A
Sbjct: 244 RPEDRPAFSRLLRQLAAIAA 263
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 98 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 153
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I S Y
Sbjct: 154 GLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-ATYGMSPY 211
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
G P++ LLE Y + + EG ++LMR C Q N +DRP
Sbjct: 212 PGIDPSQVYELLEKDYRM-ERPEGC---------PEKVYELMRA------CWQWNPSDRP 255
Query: 254 TMLEI 258
+ EI
Sbjct: 256 SFAEI 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 98 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 153
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I S Y
Sbjct: 154 GLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-ATYGMSPY 211
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
G P++ LLE Y + + EG ++LMR C Q N +DRP
Sbjct: 212 PGIDPSQVYELLEKDYRM-ERPEGC---------PEKVYELMRA------CWQWNPSDRP 255
Query: 254 TMLEI 258
+ EI
Sbjct: 256 SFAEI 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 98 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 153
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I S Y
Sbjct: 154 GLSRLMTGDTFTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-ATYGMSPY 211
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
G P++ LLE Y + + EG ++LMR C Q N +DRP
Sbjct: 212 PGIDPSQVYELLEKDYRM-ERPEGC---------PEKVYELMRA------CWQWNPSDRP 255
Query: 254 TMLEI 258
+ EI
Sbjct: 256 SFAEI 260
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G+ M +K L R + F EVK+ L+H N+L +G+ + + I +Y+ +
Sbjct: 34 TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L I + +Y W RV + I G+ YL ++ I+HRDL + N L+ N
Sbjct: 94 LRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVV 148
Query: 132 ISDFGMARAFTKDECEANTGR------------IVGTYGYVPPEYVRKGIYSMKYDVYSY 179
++DFG+AR ++ + R +VG ++ PE + Y K DV+S+
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 180 GVLLLQILG 188
G++L +I+G
Sbjct: 209 GIVLCEIIG 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 131/270 (48%), Gaps = 38/270 (14%)
Query: 5 ICQGRL--PNGQEMAVK----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQRE 58
+C GRL P +++AV ++ T Q +F E + + H N++ + G+ T+ +
Sbjct: 59 VCSGRLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFDHPNVVHLEGVVTRGK 117
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
M++ ++M N +LD ++ ++ + V ++ GI G+ YL +++ VHRDL
Sbjct: 118 PVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL---ADMGYVHRDLA 172
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMK 173
A NIL++ + K+SDFG++R D T T G +P PE ++ ++
Sbjct: 173 ARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT----TTGGKIPVRWTAPEAIQYRKFTSA 228
Query: 174 YDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
DV+SYG+++ +++ G+R + + +E Y L + +D +
Sbjct: 229 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PAPMDCPAGLH 278
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVML 262
+LM L C Q+ A+RP +I+ +L
Sbjct: 279 QLM------LDCWQKERAERPKFEQIVGIL 302
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 14 QEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
Q +A+K L + L EEF +E L ARLQH N++ +LG+ T+ + +I+ Y + L
Sbjct: 57 QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
Query: 73 DFYIF-------------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
++ D + L+ VH++ I G+ YL S+ +VH+DL
Sbjct: 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLAT 173
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ ++N KISD G+ R + G + ++ PE + G +S+ D++SY
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233
Query: 180 GVLLLQILG-GKRTSCYYGPNESLNLL 205
GV+L ++ G + C Y + + ++
Sbjct: 234 GVVLWEVFSYGLQPYCGYSNQDVVEMI 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++A+K + S +EF E K+ L H L+ + G+CT++ +I +YM
Sbjct: 43 GKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ ++R R+ + + + + + + + YL+ + +HRDL A N L++ +
Sbjct: 102 ANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQ 156
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFG++R DE ++ G + PPE + +S K D++++GVL+ +I
Sbjct: 157 GVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEI- 214
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+L + Y + N E E I L + + C E
Sbjct: 215 --------------YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 260
Query: 248 NAADRPTM 255
A +RPT
Sbjct: 261 KADERPTF 268
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++A+K + S +EF E K+ L H L+ + G+CT++ +I +YM
Sbjct: 27 GKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 85
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ ++R R+ + + + + + + + YL+ + +HRDL A N L++ +
Sbjct: 86 ANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQ 140
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFG++R DE ++ G + PPE + +S K D++++GVL+ +I
Sbjct: 141 GVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI- 198
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+L + Y + N E E I L + + C E
Sbjct: 199 --------------YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 244
Query: 248 NAADRPTM 255
A +RPT
Sbjct: 245 KADERPTF 252
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++A+K + S +EF E K+ L H L+ + G+CT++ +I +YM
Sbjct: 23 GKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ ++R R+ + + + + + + + YL+ + +HRDL A N L++ +
Sbjct: 82 ANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQ 136
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFG++R DE ++ G + PPE + +S K D++++GVL+ +I
Sbjct: 137 GVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI- 194
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+L + Y + N E E I L + + C E
Sbjct: 195 --------------YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 240
Query: 248 NAADRPTM 255
A +RPT
Sbjct: 241 KADERPTF 248
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 14 QEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
Q +A+K L + L EEF +E L ARLQH N++ +LG+ T+ + +I+ Y + L
Sbjct: 40 QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 73 DFYIF-------------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
++ D + L+ VH++ I G+ YL S+ +VH+DL
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLAT 156
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ ++N KISD G+ R + G + ++ PE + G +S+ D++SY
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 216
Query: 180 GVLLLQILG-GKRTSCYYGPNESLNLL 205
GV+L ++ G + C Y + + ++
Sbjct: 217 GVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 119/244 (48%), Gaps = 25/244 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT ++ +YMP +L Y
Sbjct: 60 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 119 LRECNREEVTA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADF 174
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 175 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNTFSIKSDVWAFGVLLWEI-------AT 226
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + G ME + ++LMR C + + ADRP
Sbjct: 227 YGMSPYPGIDLSQ-VYDLLEKGYRMEQPEGC---PPKVYELMRA------CWKWSPADRP 276
Query: 254 TMLE 257
+ E
Sbjct: 277 SFAE 280
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 131/269 (48%), Gaps = 34/269 (12%)
Query: 5 ICQG--RLPNGQEM--AVKRL-SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE 59
+C G +LP +E+ A+K L S + + +F +E + + H N++ + G+ T+
Sbjct: 23 VCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP 82
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
M+I ++M N SLD ++ ++ + V ++ GI G+ YL +++ VHR L A
Sbjct: 83 VMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMNYVHRALAA 137
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKY 174
NIL++ + K+SDFG++R D + +G G +P PE ++ ++
Sbjct: 138 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEAIQYRKFTSAS 195
Query: 175 DVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWK 233
DV+SYG+++ +++ G+R + +N +E Y L +D S+ +
Sbjct: 196 DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL----------PPPMDCPSALHQ 245
Query: 234 LMRCMQVALLCVQENAADRPTMLEILVML 262
LM L C Q++ RP +I+ L
Sbjct: 246 LM------LDCWQKDRNHRPKFGQIVNTL 268
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++A+K + S +EF E K+ L H L+ + G+CT++ +I +YM
Sbjct: 34 GKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 92
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ ++R R+ + + + + + + + YL+ + +HRDL A N L++ +
Sbjct: 93 ANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQ 147
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFG++R DE ++ G + PPE + +S K D++++GVL+ +I
Sbjct: 148 GVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEI- 205
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+L + Y + N E E I L + + C E
Sbjct: 206 --------------YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 251
Query: 248 NAADRPTM 255
A +RPT
Sbjct: 252 KADERPTF 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++A+K + S +EF E K+ L H L+ + G+CT++ +I +YM
Sbjct: 28 GKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 86
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ ++R R+ + + + + + + + YL+ + +HRDL A N L++ +
Sbjct: 87 ANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQ 141
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFG++R DE ++ G + PPE + +S K D++++GVL+ +I
Sbjct: 142 GVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI- 199
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+L + Y + N E E I L + + C E
Sbjct: 200 --------------YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 245
Query: 248 NAADRPTM 255
A +RPT
Sbjct: 246 KADERPTF 253
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++A+K + S +EF E K+ L H L+ + G+CT++ +I +YM
Sbjct: 43 GKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ ++R R+ + + + + + + + YL+ + +HRDL A N L++ +
Sbjct: 102 ANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQ 156
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFG++R DE ++ G + PPE + +S K D++++GVL+ +I
Sbjct: 157 GVVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEI- 214
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+L + Y + N E E I L + + C E
Sbjct: 215 --------------YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 260
Query: 248 NAADRPTM 255
A +RPT
Sbjct: 261 KADERPTF 268
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 93
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 94 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 139
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 140 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 199
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 200 VLYELMTGQ 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 118
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 119 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 164
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 165 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 224
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 225 VLYELMTGQ 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLY 91
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 92 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 137
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 138 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 198 VLYELMTGQ 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 119
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 120 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 165
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 166 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 225
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 226 VLYELMTGQ 234
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 96
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 97 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 142
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 143 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 202
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 203 VLYELMTGQ 211
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+ G N ++AVK L + ++ F E L LQH L+ + + T+ E +I
Sbjct: 29 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT 87
Query: 65 DYMPNKSL-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL 123
+YM SL DF D + LL + I +G+ Y++ + +HRDL+A+N+L
Sbjct: 88 EYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAANVL 142
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLL 183
+ + KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL
Sbjct: 143 VSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVWSFGILL 201
Query: 184 LQIL 187
+I+
Sbjct: 202 YEIV 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++A+K + S +EF E K+ L H L+ + G+CT++ +I +YM
Sbjct: 28 GKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 86
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ ++R R+ + + + + + + + YL+ + +HRDL A N L++ +
Sbjct: 87 ANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQ 141
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFG++R DE ++ G + PPE + +S K D++++GVL+ +I
Sbjct: 142 GVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI- 199
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+L + Y + N E E I L + + C E
Sbjct: 200 --------------YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 245
Query: 248 NAADRPTM 255
A +RPT
Sbjct: 246 KADERPTF 253
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 91
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 92 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 137
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 138 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 198 VLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 96
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 97 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 142
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 143 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 202
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 203 VLYELMTGQ 211
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 111
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 112 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 157
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 158 HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 217
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 218 VLYELMTGQ 226
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G N ++A+K + R E+F E ++ +L H L+ + G+C ++ L++++M
Sbjct: 24 GYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
+ L Y+ +R L T + + + +G+ YL+E ++HRDL A N L+
Sbjct: 83 EHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN 137
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFGM R D+ ++TG + PE YS K DV+S+GVL+ ++
Sbjct: 138 QVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ P E+ + N E +E I + Q+ C +E
Sbjct: 197 SEGKI-----PYENRS----------NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 241
Query: 248 NAADRPTMLEILVML 262
DRP +L L
Sbjct: 242 RPEDRPAFSRLLRQL 256
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 119
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 120 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 165
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 166 HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 225
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 226 VLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 91
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I QG+ YL S I+HRDLK++NI L
Sbjct: 92 HHLHIIETKFEMIKL-----------IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFL 137
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
++ KI DFG+A ++ ++ G+ ++ PE +R K YS + DVY++G+
Sbjct: 138 HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
Query: 182 LLLQILGGK 190
+L +++ G+
Sbjct: 198 VLYELMTGQ 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G N ++A+K + R E+F E ++ +L H L+ + G+C ++ L++++M
Sbjct: 26 GYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 84
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
+ L Y+ +R L T + + + +G+ YL+E ++HRDL A N L+
Sbjct: 85 EHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN 139
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFGM R D+ ++TG + PE YS K DV+S+GVL+ ++
Sbjct: 140 QVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ P E+ + N E +E I + Q+ C +E
Sbjct: 199 SEGKI-----PYENRS----------NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 243
Query: 248 NAADRPTMLEILVML 262
DRP +L L
Sbjct: 244 RPEDRPAFSRLLRQL 258
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 35 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 92
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 93 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 143
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 186 ILGGKRTSCYYGPN--ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
I+ R Y G E + LE Y + + E ++LMR L
Sbjct: 203 IVTHGRIP-YPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------L 245
Query: 244 CVQENAADRPTM 255
C +E DRPT
Sbjct: 246 CWKERPEDRPTF 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 36 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 93
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 94 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 144
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 145 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 186 ILGGKRTSCYYGPN--ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
I+ R Y G E + LE Y + + E ++LMR L
Sbjct: 204 IVTHGRIP-YPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------L 246
Query: 244 CVQENAADRPTM 255
C +E DRPT
Sbjct: 247 CWKERPEDRPTF 258
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 37 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 94
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 95 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 145
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 146 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 186 ILGGKRTSCYYGPN--ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
I+ R Y G E + LE Y + + E ++LMR L
Sbjct: 205 IVTHGRIP-YPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------L 247
Query: 244 CVQENAADRPTM 255
C +E DRPT
Sbjct: 248 CWKERPEDRPTF 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G N ++A+K + R E+F E ++ +L H L+ + G+C ++ L++++M
Sbjct: 29 GYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
+ L Y+ +R L T + + + +G+ YL+E ++HRDL A N L+
Sbjct: 88 EHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN 142
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFGM R D+ ++TG + PE YS K DV+S+GVL+ ++
Sbjct: 143 QVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVF 201
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ P E+ + N E +E I + Q+ C +E
Sbjct: 202 SEGKI-----PYENRS----------NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRE 246
Query: 248 NAADRPTMLEILVML 262
DRP +L L
Sbjct: 247 RPEDRPAFSRLLRQL 261
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 35/251 (13%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 44 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 101
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 102 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 152
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 211
Query: 186 ILGGKRTSCYYGPN-ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
I+ R N E + LE Y + + E ++LMR LC
Sbjct: 212 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------LC 255
Query: 245 VQENAADRPTM 255
+E DRPT
Sbjct: 256 WKERPEDRPTF 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 35/251 (13%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 43 NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 100
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 101 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 151
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 152 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 186 ILGGKRTSCYYGPN-ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
I+ R N E + LE Y + + E + ++LMR LC
Sbjct: 211 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------YQLMR------LC 254
Query: 245 VQENAADRPTM 255
+E DRPT
Sbjct: 255 WKERPEDRPTF 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 35 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 92
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 93 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 143
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 186 ILGGKRTSCYYGPN--ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
I+ R Y G E + LE Y + + E ++LMR L
Sbjct: 203 IVTHGRIP-YPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------L 245
Query: 244 CVQENAADRPTM 255
C +E DRPT
Sbjct: 246 CWKERPEDRPTF 257
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 3 VAICQGRLPNGQEM--AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK 60
+A C LP +M AVK L S ++F+ E +L LQH +++ G+CT+
Sbjct: 36 LAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 95
Query: 61 MLIYDYMPNKSLDFYIFDLRRRYLLDWR----------------TRVHIIEGITQGLLYL 104
+++++YM + L+ ++ R + D + + + + G++YL
Sbjct: 96 LMVFEYMRHGDLNRFL----RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL 151
Query: 105 QEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEY 164
+ L VHRDL N L+ + KI DFGM+R + GR + ++PPE
Sbjct: 152 ---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES 208
Query: 165 VRKGIYSMKYDVYSYGVLLLQIL 187
+ ++ + DV+S+GV+L +I
Sbjct: 209 ILYRKFTTESDVWSFGVVLWEIF 231
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 3 VAICQGRLPNGQEM--AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK 60
+A C LP +M AVK L S ++F+ E +L LQH +++ G+CT+
Sbjct: 30 LAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 89
Query: 61 MLIYDYMPNKSLDFYIFDLRRRYLLDWR----------------TRVHIIEGITQGLLYL 104
+++++YM + L+ ++ R + D + + + + G++YL
Sbjct: 90 LMVFEYMRHGDLNRFL----RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL 145
Query: 105 QEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEY 164
+ L VHRDL N L+ + KI DFGM+R + GR + ++PPE
Sbjct: 146 ---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES 202
Query: 165 VRKGIYSMKYDVYSYGVLLLQIL 187
+ ++ + DV+S+GV+L +I
Sbjct: 203 ILYRKFTTESDVWSFGVVLWEIF 225
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 35/251 (13%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 41 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 98
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 99 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 149
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 186 ILGGKRTSCYYGPN-ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
I+ R N E + LE Y + + E ++LMR LC
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------LC 252
Query: 245 VQENAADRPTM 255
+E DRPT
Sbjct: 253 WKERPEDRPTF 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 35/251 (13%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 41 NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 98
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 99 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 149
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 186 ILGGKRTSCYYGPN-ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
I+ R N E + LE Y + + E + ++LMR LC
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------YQLMR------LC 252
Query: 245 VQENAADRPTM 255
+E DRPT
Sbjct: 253 WKERPEDRPTF 263
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 113/218 (51%), Gaps = 18/218 (8%)
Query: 5 ICQGRL--PNGQE--MAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE 59
+C+GRL P +E +A+K L + + EF +E + + +H N++ + G+ T
Sbjct: 32 VCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMP 91
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
M++ ++M N +LD ++ ++ + V ++ GI G+ YL E ++ VHRDL A
Sbjct: 92 VMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLAE---MSYVHRDLAA 146
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKY 174
NIL++ + K+SDFG++R ++ + +G G +P PE + ++
Sbjct: 147 RNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG--GKIPIRWTAPEAIAFRKFTSAS 204
Query: 175 DVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGL 211
D +SYG+++ +++ G+R + +N +E Y L
Sbjct: 205 DAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL 242
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 3 VAICQGRLPNGQEM--AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK 60
+A C LP +M AVK L S ++F+ E +L LQH +++ G+CT+
Sbjct: 59 LAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118
Query: 61 MLIYDYMPNKSLDFYIFDLRRRYLLDWR----------------TRVHIIEGITQGLLYL 104
+++++YM + L+ ++ R + D + + + + G++YL
Sbjct: 119 LMVFEYMRHGDLNRFL----RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL 174
Query: 105 QEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEY 164
+ L VHRDL N L+ + KI DFGM+R + GR + ++PPE
Sbjct: 175 ---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES 231
Query: 165 VRKGIYSMKYDVYSYGVLLLQIL 187
+ ++ + DV+S+GV+L +I
Sbjct: 232 ILYRKFTTESDVWSFGVVLWEIF 254
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 35 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 92
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 93 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 143
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 186 ILGGKRTSCYYGPN--ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
I+ R Y G E + LE Y + + E ++LMR L
Sbjct: 203 IVTHGRIP-YPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------L 245
Query: 244 CVQENAADRPTM 255
C +E DRPT
Sbjct: 246 CWKERPEDRPTF 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 35/251 (13%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 40 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 97
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 98 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 148
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 186 ILGGKRTSCYYGPN-ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
I+ R N E + LE Y + + E ++LMR LC
Sbjct: 208 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------LC 251
Query: 245 VQENAADRPTM 255
+E DRPT
Sbjct: 252 WKERPEDRPTF 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 30 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 87
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 88 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 138
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 197
Query: 186 ILGGKRTSCYYGPN--ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
I+ R Y G E + LE Y + + E ++LMR L
Sbjct: 198 IVTHGRIP-YPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------L 240
Query: 244 CVQENAADRPTM 255
C +E DRPT
Sbjct: 241 CWKERPEDRPTF 252
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 113/218 (51%), Gaps = 18/218 (8%)
Query: 5 ICQGRL--PNGQE--MAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE 59
+C+GRL P +E +A+K L + + EF +E + + +H N++ + G+ T
Sbjct: 30 VCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMP 89
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
M++ ++M N +LD ++ ++ + V ++ GI G+ YL E ++ VHRDL A
Sbjct: 90 VMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLAE---MSYVHRDLAA 144
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKY 174
NIL++ + K+SDFG++R ++ + +G G +P PE + ++
Sbjct: 145 RNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG--GKIPIRWTAPEAIAFRKFTSAS 202
Query: 175 DVYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGL 211
D +SYG+++ +++ G+R + +N +E Y L
Sbjct: 203 DAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL 240
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 35/251 (13%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 45 NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 102
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 103 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 153
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 186 ILGGKRTSCYYGPN-ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
I+ R N E + LE Y + + E + ++LMR LC
Sbjct: 213 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------YQLMR------LC 256
Query: 245 VQENAADRPTM 255
+E DRPT
Sbjct: 257 WKERPEDRPTF 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 42 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 101 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 156
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 157 GLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 208
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 209 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 258
Query: 254 TMLEI 258
+ EI
Sbjct: 259 SFAEI 263
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 105 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 160
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 161 GLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 212
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 213 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 262
Query: 254 TMLEI 258
+ EI
Sbjct: 263 SFAEI 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 35/251 (13%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 35 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 92
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HRDL+A+NIL+
Sbjct: 93 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRDLRAANILVS 143
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR E A G + PE + G +++K DV+S+G+LL +
Sbjct: 144 DTLSCKIADFGLARLIEDAEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 186 ILGGKRTSCYYGPN-ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
I+ R N E + LE Y + + E + ++LMR LC
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------YQLMR------LC 246
Query: 245 VQENAADRPTM 255
+E DRPT
Sbjct: 247 WKERPEDRPTF 257
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 105 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 160
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 212
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 213 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 262
Query: 254 TMLEI 258
+ EI
Sbjct: 263 SFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 105 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 160
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 212
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 213 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 262
Query: 254 TMLEI 258
+ EI
Sbjct: 263 SFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 105 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 160
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 212
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 213 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 262
Query: 254 TMLEI 258
+ EI
Sbjct: 263 SFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 45 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 104 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 159
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 160 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 211
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 212 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 261
Query: 254 TMLEI 258
+ EI
Sbjct: 262 SFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 100 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 155
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 207
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 208 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 257
Query: 254 TMLEI 258
+ EI
Sbjct: 258 SFAEI 262
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 120/237 (50%), Gaps = 29/237 (12%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTR 90
+F E + + H N++ + G+ ++ + M+I +YM N +LD ++ + + +
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQL 149
Query: 91 VHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA-- 148
V ++ GI G+ YL +N+ VHRDL A NIL++ + K+SDFG++R +D+ EA
Sbjct: 150 VGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATY 205
Query: 149 --NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG-GKRTSCYYGPNESLNLL 205
+ G+I + PE + ++ DV+S+G+++ +++ G+R +E + +
Sbjct: 206 TTSGGKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
Query: 206 EYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
+ L + +D S+ ++LM + C Q+ A RP +I+ +L
Sbjct: 264 NDGFRL----------PTPMDCPSAIYQLM------MQCWQQERARRPKFADIVSIL 304
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 100 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 155
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 207
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 208 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 257
Query: 254 TMLEI 258
+ EI
Sbjct: 258 SFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 43 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 102 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 157
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 209
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 210 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 259
Query: 254 TMLEI 258
+ EI
Sbjct: 260 SFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 43 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 102 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 157
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 209
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 210 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 259
Query: 254 TMLEI 258
+ EI
Sbjct: 260 SFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 54 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 113 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 168
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 169 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 220
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 221 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 270
Query: 254 TMLEI 258
+ EI
Sbjct: 271 SFAEI 275
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 106 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 160
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 161 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 216
Query: 186 IL 187
+
Sbjct: 217 LF 218
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 105 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 160
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 212
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 213 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 262
Query: 254 TMLEI 258
+ EI
Sbjct: 263 SFAEI 267
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 104 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 158
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 159 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 214
Query: 186 IL 187
+
Sbjct: 215 LF 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 99 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 154 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 186 IL 187
+
Sbjct: 210 LF 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 100 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 155
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 207
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 208 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 257
Query: 254 TMLEI 258
+ EI
Sbjct: 258 SFAEI 262
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 105 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 159
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 160 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 215
Query: 186 IL 187
+
Sbjct: 216 LF 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 102 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 157 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 186 IL 187
+
Sbjct: 213 LF 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 99 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 154 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 186 IL 187
+
Sbjct: 210 LF 211
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 26/263 (9%)
Query: 15 EMAVKRLSRTSHQGLEE-FENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L T+H +E +E+K+ + L QH N++ +LG CT ++I +Y L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 73 DFYI-------FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
++ D L+ R +H + QG+ +L ++ +HRD+ A N+LL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D G ++ PE + +Y+++ DV+SYG+LL +
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 186 ILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCV 245
I SL L Y G+ N + + + + A+ + C
Sbjct: 247 IF-------------SLGLNPYP-GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 292
Query: 246 QENAADRPTMLEILVMLKSETAD 268
RPT +I L+ + +
Sbjct: 293 ALEPTHRPTFQQICSFLQEQAQE 315
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 97 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 151
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 152 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 207
Query: 186 IL 187
+
Sbjct: 208 LF 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 22/255 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G N ++A+K + R E+F E ++ +L H L+ + G+C ++ L+ ++M
Sbjct: 27 GYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
+ L Y+ +R L T + + + +G+ YL+E ++HRDL A N L+
Sbjct: 86 EHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN 140
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFGM R D+ ++TG + PE YS K DV+S+GVL+ ++
Sbjct: 141 QVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ P E+ + N E +E I + Q+ C +E
Sbjct: 200 SEGKI-----PYENRS----------NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRE 244
Query: 248 NAADRPTMLEILVML 262
DRP +L L
Sbjct: 245 RPEDRPAFSRLLRQL 259
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 130 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 184
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 185 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 240
Query: 186 IL 187
+
Sbjct: 241 LF 242
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G N ++A+K + S ++F E ++ +L H L+ + G+C ++ L++++M
Sbjct: 46 GYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 104
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
+ L Y+ +R L T + + + +G+ YL+E ++HRDL A N L+
Sbjct: 105 EHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGEN 159
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K+SDFGM R D+ ++TG + PE YS K DV+S+GVL+ ++
Sbjct: 160 QVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWEVF 218
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ P E+ + N E +E I + Q+ C +E
Sbjct: 219 SEGKI-----PYENRS----------NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 263
Query: 248 NAADRPTMLEILVML 262
DRP +L L
Sbjct: 264 RPEDRPAFSRLLRQL 278
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 26/263 (9%)
Query: 15 EMAVKRLSRTSHQGLEE-FENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L T+H +E +E+K+ + L QH N++ +LG CT ++I +Y L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 73 DFYI-------FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
++ D L+ R +H + QG+ +L ++ +HRD+ A N+LL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D G ++ PE + +Y+++ DV+SYG+LL +
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 186 ILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCV 245
I SL L Y G+ N + + + + A+ + C
Sbjct: 255 IF-------------SLGLNPYP-GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 300
Query: 246 QENAADRPTMLEILVMLKSETAD 268
RPT +I L+ + +
Sbjct: 301 ALEPTHRPTFQQICSFLQEQAQE 323
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 103 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 157
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 158 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 213
Query: 186 IL 187
+
Sbjct: 214 LF 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 100 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 155
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 207
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 208 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 257
Query: 254 TMLEI 258
+ EI
Sbjct: 258 SFAEI 262
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 98 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 152
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 153 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 208
Query: 186 IL 187
+
Sbjct: 209 LF 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 100 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 155
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 207
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 208 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 257
Query: 254 TMLEI 258
+ EI
Sbjct: 258 SFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 100 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 155
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 207
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 208 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 257
Query: 254 TMLEI 258
+ EI
Sbjct: 258 SFAEI 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 117 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 171
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 172 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 186 IL 187
+
Sbjct: 228 LF 229
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+ G N ++AVK L + ++ F E L LQH L+ + + T+ E +I
Sbjct: 28 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 86
Query: 65 DYMPNKSL-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL 123
++M SL DF D + LL + I +G+ Y++ + +HRDL+A+N+L
Sbjct: 87 EFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAANVL 141
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLL 183
+ + KI+DFG+AR +E A G + PE + G +++K +V+S+G+LL
Sbjct: 142 VSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGCFTIKSNVWSFGILL 200
Query: 184 LQIL 187
+I+
Sbjct: 201 YEIV 204
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 42 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 101 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 156
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A G + PE + +S+K DV+++GVLL +I
Sbjct: 157 GLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 208
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 209 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 258
Query: 254 TMLEI 258
+ EI
Sbjct: 259 SFAEI 263
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 117 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 171
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 172 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 186 IL 187
+
Sbjct: 228 LF 229
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 37/252 (14%)
Query: 12 NGQ-EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
NG ++AVK L + S + F E L +LQH L+ + + TQ E +I +YM N
Sbjct: 31 NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 88
Query: 71 SLDFYI-----FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
SL ++ L LLD + I +G+ +++E + +HR+L+A+NIL+
Sbjct: 89 SLVDFLKTPSGIKLTINKLLD------MAAQIAEGMAFIEERN---YIHRNLRAANILVS 139
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
++ KI+DFG+AR +E A G + PE + G +++K DV+S+G+LL +
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 198
Query: 186 ILGGKRTSCYYGPN--ESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALL 243
I+ R Y G E + LE Y + + E ++LMR L
Sbjct: 199 IVTHGRIP-YPGMTNPEVIQNLERGYRMVRPDNCPE----------ELYQLMR------L 241
Query: 244 CVQENAADRPTM 255
C +E DRPT
Sbjct: 242 CWKERPEDRPTF 253
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 38/259 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 95
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I +G+ YL S I+HRDLK++NI L
Sbjct: 96 HHLHASETKFEMKKL-----------IDIARQTARGMDYLHAKS---IIHRDLKSNNIFL 141
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
+ KI DFG+A ++ ++ G+ ++ PE +R YS + DVY++G+
Sbjct: 142 HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 201
Query: 182 LLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVA 241
+L +++ G+ Y N ++E G G D S S+ ++ R M
Sbjct: 202 VLYELMTGQLP--YSNINNRDQIIEMV------GRGSLSPDLSKVRSNCPKRMKRLMAE- 252
Query: 242 LLCVQENAADRPTMLEILV 260
C+++ +RP+ IL
Sbjct: 253 --CLKKKRDERPSFPRILA 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 43 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HRDL A N L+ K++DF
Sbjct: 102 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADF 157
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A G + PE + +S+K DV+++GVLL +I
Sbjct: 158 GLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 209
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + ++LMR C Q N +DRP
Sbjct: 210 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGC---PEKVYELMRA------CWQWNPSDRP 259
Query: 254 TMLEI 258
+ EI
Sbjct: 260 SFAEI 264
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 99 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 131 KISDFGMARAFTKDE-----CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ E I + PE + + +S+ DV+S+GV+L +
Sbjct: 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIF----WYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 186 IL 187
+
Sbjct: 210 LF 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 38/259 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLY 107
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I +G+ YL S I+HRDLK++NI L
Sbjct: 108 HHLHASETKFEMKKL-----------IDIARQTARGMDYLHAKS---IIHRDLKSNNIFL 153
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
+ KI DFG+A ++ ++ G+ ++ PE +R YS + DVY++G+
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
Query: 182 LLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVA 241
+L +++ G+ Y N ++E G G D S S+ ++ R M
Sbjct: 214 VLYELMTGQLP--YSNINNRDQIIEMV------GRGSLSPDLSKVRSNCPKRMKRLMAE- 264
Query: 242 LLCVQENAADRPTMLEILV 260
C+++ +RP+ IL
Sbjct: 265 --CLKKKRDERPSFPRILA 281
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 38/259 (14%)
Query: 15 EMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLL--------PVLGICTQREEKMLIY 64
++AVK L+ T + Q L+ F+NEV + + +HVN+L P L I TQ E +Y
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 107
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
++ F + L + I +G+ YL S I+HRDLK++NI L
Sbjct: 108 HHLHASETKFEMKKL-----------IDIARQTARGMDYLHAKS---IIHRDLKSNNIFL 153
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGV 181
+ KI DFG+A ++ ++ G+ ++ PE +R YS + DVY++G+
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
Query: 182 LLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVA 241
+L +++ G+ Y N ++E G G D S S+ ++ R M
Sbjct: 214 VLYELMTGQLP--YSNINNRDQIIEMV------GRGSLSPDLSKVRSNCPKRMKRLMAE- 264
Query: 242 LLCVQENAADRPTMLEILV 260
C+++ +RP+ IL
Sbjct: 265 --CLKKKRDERPSFPRILA 281
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +++P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 102 SLREYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 157 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 186 IL 187
+
Sbjct: 213 LF 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 287 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HR+L A N L+ K++DF
Sbjct: 346 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADF 401
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 402 GLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 453
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + + ++LMR C Q N +DRP
Sbjct: 454 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPE---KVYELMRA------CWQWNPSDRP 503
Query: 254 TMLEI 258
+ EI
Sbjct: 504 SFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 245 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ ++ +++ I+ + YL++ + +HR+L A N L+ K++DF
Sbjct: 304 LRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADF 359
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 360 GLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 411
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + + ++LMR C Q N +DRP
Sbjct: 412 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPE---KVYELMRA------CWQWNPSDRP 461
Query: 254 TMLEI 258
+ EI
Sbjct: 462 SFAEI 466
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ R +D + I +G+ YL +HRDL NIL++ E
Sbjct: 102 SLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ V G P PE + + +S+ DV+S+GV+L +
Sbjct: 157 KIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 186 IL 187
+
Sbjct: 213 LF 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++L H N++ +G+ Q + ++ + M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 186
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 247 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 291
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++L H N++ +G+ Q + ++ + M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 172
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 173 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 233 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 277
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L + + +EEF E + ++H NL+ +LG+CT+ +I ++M +L Y
Sbjct: 248 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 76 IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDF 135
+ + R+ + +++ I+ + YL++ + +HR+L A N L+ K++DF
Sbjct: 307 LRECNRQEVSA-VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADF 362
Query: 136 GMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCY 195
G++R T D A+ G + PE + +S+K DV+++GVLL +I
Sbjct: 363 GLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-------AT 414
Query: 196 YG--PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
YG P ++L + Y L + ME + + ++LMR C Q N +DRP
Sbjct: 415 YGMSPYPGIDLSQ-VYELLEKDYRMERPEGCPE---KVYELMRA------CWQWNPSDRP 464
Query: 254 TMLEI 258
+ EI
Sbjct: 465 SFAEI 469
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 36/270 (13%)
Query: 15 EMAVKRLSRTSHQGLEE-FENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L T+H +E +E+K+ + L QH N++ +LG CT ++I +Y L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 73 DFYIFDLRRRY--------------LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
+ LRR+ L R +H + QG+ +L ++ +HRD+
Sbjct: 138 LNF---LRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 191
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
A N+LL KI DFG+AR D G ++ PE + +Y+++ DV+S
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 251
Query: 179 YGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCM 238
YG+LL +I SL L Y G+ N + + + + A+
Sbjct: 252 YGILLWEIF-------------SLGLNPYP-GILVNSKFYKLVKDGYQMAQPAFAPKNIY 297
Query: 239 QVALLCVQENAADRPTMLEILVMLKSETAD 268
+ C RPT +I L+ + +
Sbjct: 298 SIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPNK 70
G+ +AVK+L ++ + L +FE E+++ LQH N++ G+C R LI +Y+P
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
SL Y+ + R +D + I +G+ YL +HR+L NIL++ E
Sbjct: 100 SLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRV 154
Query: 131 KISDFGMARAFTKDE-----CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
KI DFG+ + +D+ E I + PE + + +S+ DV+S+GV+L +
Sbjct: 155 KIGDFGLTKVLPQDKEYYKVKEPGESPIF----WYAPESLTESKFSVASDVWSFGVVLYE 210
Query: 186 IL 187
+
Sbjct: 211 LF 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHRDL A N ++ ++ KI DFGM R +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 234
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 235 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLK 284
Query: 264 SE 265
+
Sbjct: 285 DD 286
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 50 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 109
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 110 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 163
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 164 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 223
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 224 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 268
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 269 IMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 32/269 (11%)
Query: 15 EMAVKRLSRTSHQGLEE-FENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L T+H +E +E+K+ + L QH N++ +LG CT ++I +Y L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
++ R L L R +H + QG+ +L ++ +HRD+ A
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 194
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+LL KI DFG+AR D G ++ PE + +Y+++ DV+SY
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
G+LL +I SL L Y G+ N + + + + A+
Sbjct: 255 GILLWEIF-------------SLGLNPYP-GILVNSKFYKLVKDGYQMAQPAFAPKNIYS 300
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C RPT +I L+ + +
Sbjct: 301 IMQACWALEPTHRPTFQQICSFLQEQAQE 329
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 117
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 171
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 231
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 232 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 276
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 277 IMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHRDL A N ++ ++ KI DFGM R +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 237
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 238 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLK 287
Query: 264 SE 265
+
Sbjct: 288 DD 289
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 117
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 171
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 231
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 232 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 276
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 277 IMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 15 EMAVKRLSRTSHQGLEE-FENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L T+H +E +E+K+ + L QH N++ +LG CT ++I +Y
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG-- 135
Query: 73 DFYIFDLRRRYLLDW-------------RTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
D F R+ +L+ R +H + QG+ +L ++ +HRD+ A
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 192
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+LL KI DFG+AR D G ++ PE + +Y+++ DV+SY
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
G+LL +I SL L Y G+ N + + + + A+
Sbjct: 253 GILLWEIF-------------SLGLNPYP-GILVNSKFYKLVKDGYQMAQPAFAPKNIYS 298
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C RPT +I L+ + +
Sbjct: 299 IMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 172
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 173 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 233 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 277
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 132
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 186
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 247 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 291
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 73 PSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 186
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 247 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 291
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 125 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 178
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 179 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 238
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 239 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 283
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 284 IMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 75 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 134
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 135 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 188
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 189 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 248
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 249 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 293
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 294 IMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHRDL A N ++ ++ KI DFGM R +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 237
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 238 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLK 287
Query: 264 SE 265
+
Sbjct: 288 DD 289
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 85 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 144
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 145 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 198
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 199 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 258
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 259 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 303
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 304 IMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 23 RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRR 82
R + L+ FE EV +++L H N++ ++ + + + L+ +Y+ +L YI
Sbjct: 49 REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESH 105
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
L T ++ I G+ + + + IVHRD+K NIL+D KI DFG+A+A +
Sbjct: 106 GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162
Query: 143 KDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ T ++GT Y PE + D+YS G++L ++L G+
Sbjct: 163 ETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 76 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 135
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 136 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 189
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 190 LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 249
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 250 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 294
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 295 IMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 159 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 212
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMAR + G + ++PPE +GI++ K D +S+
Sbjct: 213 LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 272
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 273 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 317
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 318 IMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTS--HQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK 60
V C+ R+ QE AVK +++ S ++ EV+L +L H N++ + I
Sbjct: 38 VLKCKDRITQ-QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96
Query: 61 MLIYDYMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
++ + L FD + +R II+ + G+ Y+ +++ IVHRDLK
Sbjct: 97 YIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKP 149
Query: 120 SNILLDY---EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
NILL+ + + KI DFG++ F ++ + +GT Y+ PE +R G Y K DV
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLR-GTYDEKCDV 205
Query: 177 YSYGVLLLQILGGKRTSCYYGPNE 200
+S GV+L +L G T +YG NE
Sbjct: 206 WSAGVILYILLSG--TPPFYGKNE 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 3 VAICQGRLPNGQEM--AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK 60
+A C P +M AVK L + ++F+ E +L LQH +++ G+C +
Sbjct: 33 LAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 92
Query: 61 MLIYDYMPNKSLDFYI--FDLRRRYLLDWRTR-----------VHIIEGITQGLLYLQEY 107
+++++YM + L+ ++ L+D + R +HI I G++YL
Sbjct: 93 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL--- 149
Query: 108 SNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRK 167
++ VHRDL N L+ + KI DFGM+R + G + ++PPE +
Sbjct: 150 ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 209
Query: 168 GIYSMKYDVYSYGVLLLQIL 187
++ + DV+S+GV+L +I
Sbjct: 210 RKFTTESDVWSFGVILWEIF 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 15 EMAVKRLSRTSHQGLEE-FENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDY------ 66
++AVK L T+H +E +E+K+ + L QH N++ +LG CT ++I +Y
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 67 ----------MPNKSL----DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTI 112
M SL D D L+ R +H + QG+ +L ++
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNC 179
Query: 113 VHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM 172
+HRD+ A N+LL KI DFG+AR D G ++ PE + +Y++
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 173 KYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAW 232
+ DV+SYG+LL +I SL L Y G+ N + + + + A+
Sbjct: 240 QSDVWSYGILLWEIF-------------SLGLNPYP-GILVNSKFYKLVKDGYQMAQPAF 285
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVMLKSETAD 268
+ C RPT +I L+ + +
Sbjct: 286 APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 321
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 29 LEEFENEVKLTARLQHVNLLPVLG--------ICTQREEKMLIYDYMPNKSLDFYIFDLR 80
+ F NEV + + +HVN+L +G I TQ E +Y ++ + F +F L
Sbjct: 76 FQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL- 134
Query: 81 RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARA 140
+ I QG+ YL + I+HRD+K++NI L + KI DFG+A
Sbjct: 135 ----------IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV 181
Query: 141 FTKDECEANTGRIVGTYGYVPPEYVR---KGIYSMKYDVYSYGVLLLQILGGK 190
++ + G+ ++ PE +R +S + DVYSYG++L +++ G+
Sbjct: 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+ ++AVK L S Q +F E + ++ H N++ +G+ Q + ++ + M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 70 KSLDFYIFDLRRR-------YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
L ++ + R R +LD +H+ I G YL+E +HRD+ A N
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNC 172
Query: 123 LLDYEMN---PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL KI DFGMA+ + G + ++PPE +GI++ K D +S+
Sbjct: 173 LLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I SL + Y N E +EF+ S +
Sbjct: 233 GVLLWEIF-------------SLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYR 277
Query: 240 VALLCVQENAADRPTMLEILVMLKSETAD 268
+ C Q DRP IL ++ T D
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHRDL A N ++ ++ KI DFGM R +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 236
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 237 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLK 286
Query: 264 SE 265
+
Sbjct: 287 DD 288
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 21/192 (10%)
Query: 10 LPNGQ----EMAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+ +A+K L+ T+ EF +E + A + H +L+ +LG+C + L+
Sbjct: 60 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVT 118
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP+ L Y+ + + + LL+W + I +G++YL+E +VHRDL A
Sbjct: 119 QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEERR---LVHRDLAAR 169
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
N+L+ + KI+DFG+AR DE E N ++ E + ++ + DV+SYG
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 229
Query: 181 VLLLQIL--GGK 190
V + +++ GGK
Sbjct: 230 VTIWELMTFGGK 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTS--HQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK 60
V C+ R+ QE AVK +++ S ++ EV+L +L H N++ + I
Sbjct: 38 VLKCKDRITQ-QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96
Query: 61 MLIYDYMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
++ + L FD + +R II+ + G+ Y+ +++ IVHRDLK
Sbjct: 97 YIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKP 149
Query: 120 SNILLDY---EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
NILL+ + + KI DFG++ F ++ +GT Y+ PE +R G Y K DV
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR-GTYDEKCDV 205
Query: 177 YSYGVLLLQILGGKRTSCYYGPNE 200
+S GV+L +L G T +YG NE
Sbjct: 206 WSAGVILYILLSG--TPPFYGKNE 227
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 21/192 (10%)
Query: 10 LPNGQ----EMAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+ +A+K L+ T+ EF +E + A + H +L+ +LG+C + L+
Sbjct: 37 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVT 95
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP+ L Y+ + + + LL+W + I +G++YL+E +VHRDL A
Sbjct: 96 QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEERR---LVHRDLAAR 146
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
N+L+ + KI+DFG+AR DE E N ++ E + ++ + DV+SYG
Sbjct: 147 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 206
Query: 181 VLLLQIL--GGK 190
V + +++ GGK
Sbjct: 207 VTIWELMTFGGK 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTS--HQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK 60
V C+ R+ QE AVK +++ S ++ EV+L +L H N++ + I
Sbjct: 38 VLKCKDRITQ-QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96
Query: 61 MLIYDYMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
++ + L FD + +R II+ + G+ Y+ +++ IVHRDLK
Sbjct: 97 YIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKP 149
Query: 120 SNILLDY---EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
NILL+ + + KI DFG++ F ++ + +GT Y+ PE +R G Y K DV
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLR-GTYDEKCDV 205
Query: 177 YSYGVLLLQILGGKRTSCYYGPNE 200
+S GV+L +L G T +YG NE
Sbjct: 206 WSAGVILYILLSG--TPPFYGKNE 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 16 MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFY 75
+AVK L S ++F E +L LQH +++ G+C + + +++++YM + L+ +
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 76 IFDLRRRYL----------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
+ + L +HI + I G++YL ++ VHRDL N L+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVG 162
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ KI DFGM+R + G + ++PPE + ++ + DV+S GV+L +
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
Query: 186 IL 187
I
Sbjct: 223 IF 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHRDL A N ++ ++ KI DFGM R +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 237
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 238 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLK 287
Query: 264 SE 265
+
Sbjct: 288 DD 289
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+G+++AVK + Q E NEV + QH N++ + EE ++ +++ +
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + +R L+ + E + Q L YL ++HRD+K+ +ILL + K
Sbjct: 129 LTDIVSQVR----LNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVK 181
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKR 191
+SDFG +KD + +VGT ++ PE + + +Y+ + D++S G+++++++ G+
Sbjct: 182 LSDFGFCAQISKDVPKRKX--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 192 TSCYYGPNESLNLL 205
P +++ L
Sbjct: 240 PYFSDSPVQAMKRL 253
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 33/237 (13%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-D 73
++AVK + + +E F E + LQH L+ + + T +E +I ++M SL D
Sbjct: 41 KVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 98
Query: 74 FYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKIS 133
F D + L + I +G+ ++++ + +HRDL+A+NIL+ + KI+
Sbjct: 99 FLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIA 153
Query: 134 DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTS 193
DFG+AR +E A G + PE + G +++K DV+S+G+LL++I+ R
Sbjct: 154 DFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
Query: 194 CYYGPN--ESLNLLEYAYGL-----------------WKN----GEGMEFIDSSLDD 227
Y G + E + LE Y + WKN E+I S LDD
Sbjct: 213 -YPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHRDL A N ++ ++ KI DFGM R +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 237
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 238 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLK 287
Query: 264 SE 265
+
Sbjct: 288 DD 289
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 33/241 (13%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-D 73
++AVK + + +E F E + LQH L+ + + T +E +I ++M SL D
Sbjct: 214 KVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 271
Query: 74 FYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKIS 133
F D + L + I +G+ ++++ + +HRDL+A+NIL+ + KI+
Sbjct: 272 FLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIA 326
Query: 134 DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTS 193
DFG+AR +E A G + PE + G +++K DV+S+G+LL++I+ R
Sbjct: 327 DFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
Query: 194 CYYGPN--ESLNLLEYAYGL-----------------WKN----GEGMEFIDSSLDDSSS 230
Y G + E + LE Y + WKN E+I S LDD +
Sbjct: 386 -YPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444
Query: 231 A 231
A
Sbjct: 445 A 445
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 220
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M +++ +C Q N RP+ LEI+ +
Sbjct: 221 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLEIISSI 279
Query: 263 KSE 265
K E
Sbjct: 280 KEE 282
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 13 GQEMAVKRLSRTS--HQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G E+A+K + + + G+ + +NEVK+ +L+H ++L + L+ + N
Sbjct: 36 GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
++ Y+ + R + + R H + I G+LYL + I+HRDL SN+LL MN
Sbjct: 96 GEMNRYLKN-RVKPFSENEAR-HFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMN 150
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
KI+DFG+A + T + GT Y+ PE + + ++ DV+S G + +L G
Sbjct: 151 IKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
Query: 190 K 190
+
Sbjct: 209 R 209
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHR+L A N ++ ++ KI DFGM R +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 238
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 239 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLK 288
Query: 264 SE 265
+
Sbjct: 289 DD 290
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 229
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M ++ +C Q N RP+ LEI+ +
Sbjct: 230 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSI 288
Query: 263 KSE 265
K E
Sbjct: 289 KEE 291
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-------RY 83
EF NE + +++ +LG+ ++ + +++ + M + L Y+ LR R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 84 LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + + I G+ YL VHR+L A N ++ ++ KI DFGM R +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ D++S+GV+L +I TS P + L+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----TSLAEQPYQGLS 237
Query: 204 LLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLK 263
+ + G ++D + LMR +C Q N RPT LEI+ +LK
Sbjct: 238 NEQVLKFVMDGG----YLDQPDNCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLK 287
Query: 264 SE 265
+
Sbjct: 288 DD 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKM-LIYDYMPNKS 71
G ++AVK + + + F E + +L+H NL+ +LG+ + + + ++ +YM S
Sbjct: 35 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L Y+ R R +L + + + + YL+ + VHRDL A N+L+ + K
Sbjct: 93 LVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAK 148
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
+SDFG+ + + + +TG++ + PE +R+ +S K DV+S+G+LL +I
Sbjct: 149 VSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML 62
V +C G + + K+LS HQ LE E ++ L+H N++ + ++ L
Sbjct: 24 VKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRLLKHSNIVRLHDSISEEGFHYL 80
Query: 63 IYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI 122
++D + L D+ R H I+ I + +L+ + + +VHRDLK N+
Sbjct: 81 VFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENL 134
Query: 123 LLDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL + K++DFG+A D+ +A G GT GY+ PE +RK Y D+++
Sbjct: 135 LLASKCKGAAVKLADFGLAIEVQGDQ-QAWFG-FAGTPGYLSPEVLRKEAYGKPVDIWAC 192
Query: 180 GVLLLQILGG 189
GV+L +L G
Sbjct: 193 GVILYILLVG 202
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
EE NE+ L L H N++ + + ++ L+ ++ L I + R+ D
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECD 147
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE---MNPKISDFGMARAFTKDEC 146
+I++ I G+ YL +++ IVHRD+K NILL+ + +N KI DFG++ F+KD
Sbjct: 148 AANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-- 202
Query: 147 EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+GT Y+ PE ++K Y+ K DV+S GV++ +L G
Sbjct: 203 -YKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPN 69
G +AVK+L + +F+ E+++ L ++ G+ R E L+ +Y+P+
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L ++ R R LD + I +G+ YL + VHRDL A NIL++ E +
Sbjct: 95 GCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 149
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLL 184
KI+DFG+A+ D+ +V G P PE + I+S + DV+S+GV+L
Sbjct: 150 VKIADFGLAKLLPLDK----DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 205
Query: 185 QILGGKRTSC 194
++ SC
Sbjct: 206 ELFTYCDKSC 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 235
Query: 204 LLEYAYGLWKNGEGMEFI------DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLE 257
L E Y N + + F+ D + ++LMR +C Q N RP+ LE
Sbjct: 236 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLE 289
Query: 258 ILVMLKSE 265
I+ +K E
Sbjct: 290 IISSIKEE 297
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL---DFYIFDLRRRY--L 84
++F+NE+++ +++ L GI T +E +IY+YM N S+ D Y F L + Y
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 85 LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKD 144
+ + II+ + Y+ N I HRD+K SNIL+D K+SDFG +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 145 ECEANTGRIVGTYGYVPPEYV--RKGIYSMKYDVYSYGVLL 183
+ + + GTY ++PPE+ K D++S G+ L
Sbjct: 206 KIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 73 DFYIFDLRRRYL--------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
Y+ R ++ D+ T H+I Q ++ ++ +HRDL A NILL
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 181
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLL 184
+ KI DFG+AR KD G ++ PE + +Y+++ DV+S+GVLL
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 185 QILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLC 244
+I S P + + E K G M D + + Q L C
Sbjct: 242 EIF-----SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE---------MYQTMLDC 287
Query: 245 VQENAADRPTMLEILVML 262
+ RPT E++ L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 225
Query: 204 LLEYAYGLWKNGEGMEFI------DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLE 257
L E Y N + + F+ D + ++LMR +C Q N RP+ LE
Sbjct: 226 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLE 279
Query: 258 ILVMLKSE 265
I+ +K E
Sbjct: 280 IISSIKEE 287
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 127/270 (47%), Gaps = 50/270 (18%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+AVK L S L + +E + ++ H +++ + G C+Q +LI +Y SL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 75 YIFDLRR---RYL----------LDWRTRVHIIEG--------ITQGLLYLQEYSNLTIV 113
++ + R+ YL LD + G I+QG+ YL E +++V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSLV 172
Query: 114 HRDLKASNILLDYEMNPKISDFGMARAFTKDE--CEANTGRIVGTYGYVPPEYVRKGIYS 171
HRDL A NIL+ KISDFG++R +++ + + GRI ++ E + IY+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI--PVKWMAIESLFDHIYT 230
Query: 172 MKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDS 228
+ DV+S+GVLL +I LGG + Y G P E L + L K G ME D+ S
Sbjct: 231 TQSDVWSFGVLLWEIVTLGG---NPYPGIPPERL------FNLLKTGHRMERPDNC---S 278
Query: 229 SSAWKLMRCMQVALLCVQENAADRPTMLEI 258
++LM L C ++ RP +I
Sbjct: 279 EEMYRLM------LQCWKQEPDKRPVFADI 302
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 228
Query: 204 LLEYAYGLWKNGEGMEFI------DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLE 257
L E Y N + + F+ D + ++LMR +C Q N RP+ LE
Sbjct: 229 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLE 282
Query: 258 ILVMLKSE 265
I+ +K E
Sbjct: 283 IISSIKEE 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 222
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M ++ +C Q N RP+ LEI+ +
Sbjct: 223 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSI 281
Query: 263 KSE 265
K E
Sbjct: 282 KEE 284
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 228
Query: 204 LLEYAYGLWKNGEGMEFI------DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLE 257
L E Y N + + F+ D + ++LMR +C Q N RP+ LE
Sbjct: 229 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLE 282
Query: 258 ILVMLKSE 265
I+ +K E
Sbjct: 283 IISSIKEE 290
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 226
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M ++ +C Q N RP+ LEI+ +
Sbjct: 227 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSI 285
Query: 263 KSE 265
K E
Sbjct: 286 KEE 288
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 23/256 (8%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 73 DFYIFDLRRRYL------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY 126
Y+ R ++ D+ T H+I Q ++ ++ +HRDL A NILL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSE 179
Query: 127 EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
+ KI DFG+AR KD G ++ PE + +Y+++ DV+S+GVLL +I
Sbjct: 180 KNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
Query: 187 LGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQ 246
S P + + E K G M D + + Q L C
Sbjct: 240 F-----SLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPE---------MYQTMLDCWH 285
Query: 247 ENAADRPTMLEILVML 262
+ RPT E++ L
Sbjct: 286 GEPSQRPTFSELVEHL 301
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 229
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M ++ +C Q N RP+ LEI+ +
Sbjct: 230 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSI 288
Query: 263 KSE 265
K E
Sbjct: 289 KEE 291
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 235
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M ++ +C Q N RP+ LEI+ +
Sbjct: 236 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSI 294
Query: 263 KSE 265
K E
Sbjct: 295 KEE 297
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 120/277 (43%), Gaps = 46/277 (16%)
Query: 15 EMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
+ A+KR+ S +F E+++ +L H N++ +LG C R L +Y P+ +L
Sbjct: 44 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 103
Query: 73 -DFYIFDLRRRYLLDW----------------RTRVHIIEGITQGLLYLQEYSNLTIVHR 115
DF LR+ +L+ + +H + +G+ YL S +HR
Sbjct: 104 LDF----LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHR 156
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
DL A NIL+ KI+DFG++R + + GR+ ++ E + +Y+ D
Sbjct: 157 DLAARNILVGENYVAKIADFGLSRG-QEVYVKKTMGRL--PVRWMAIESLNYSVYTTNSD 213
Query: 176 VYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKL 234
V+SYGVLL +I+ G C E L Y L + L+ + L
Sbjct: 214 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL----------EKPLNCDDEVYDL 263
Query: 235 MRCMQVALLCVQENAADRPTMLEILVMLKSETADIKT 271
MR C +E +RP+ +ILV L + KT
Sbjct: 264 MR------QCWREKPYERPSFAQILVSLNRMLEERKT 294
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 120/277 (43%), Gaps = 46/277 (16%)
Query: 15 EMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
+ A+KR+ S +F E+++ +L H N++ +LG C R L +Y P+ +L
Sbjct: 54 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
Query: 73 -DFYIFDLRRRYLLDW----------------RTRVHIIEGITQGLLYLQEYSNLTIVHR 115
DF LR+ +L+ + +H + +G+ YL S +HR
Sbjct: 114 LDF----LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHR 166
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
DL A NIL+ KI+DFG++R + + GR+ ++ E + +Y+ D
Sbjct: 167 DLAARNILVGENYVAKIADFGLSRG-QEVYVKKTMGRL--PVRWMAIESLNYSVYTTNSD 223
Query: 176 VYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKL 234
V+SYGVLL +I+ G C E L Y L + L+ + L
Sbjct: 224 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL----------EKPLNCDDEVYDL 273
Query: 235 MRCMQVALLCVQENAADRPTMLEILVMLKSETADIKT 271
MR C +E +RP+ +ILV L + KT
Sbjct: 274 MR------QCWREKPYERPSFAQILVSLNRMLEERKT 304
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 16 MAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+AVK L + ++ +F+ E L A + N++ +LG+C + L+++YM L+
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 75 YIFDLRRRYL-------LDWRTRVH--------------IIEGITQGLLYLQEYSNLTIV 113
++ + + L R RV I + G+ YL E V
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FV 196
Query: 114 HRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK 173
HRDL N L+ M KI+DFG++R + G ++PPE + Y+ +
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE 256
Query: 174 YDVYSYGVLLLQIL 187
DV++YGV+L +I
Sbjct: 257 SDVWAYGVVLWEIF 270
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 16 MAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+AVK T L+ +F E ++ + H N++ ++G+CTQ++ ++ + + + DF
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV--QGGDF 199
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
F L +T + ++ G+ YL+ + +HRDL A N L+ + KISD
Sbjct: 200 LTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISD 256
Query: 135 FGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FGM+R A+ G + PE + G YS + DV+S+G+LL +
Sbjct: 257 FGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N ++ + KI DFGM R +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 257
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M ++ +C Q N RP+ LEI+ +
Sbjct: 258 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSI 316
Query: 263 KSE 265
K E
Sbjct: 317 KEE 319
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 8 GRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
G+ ++AVK + S +EF E + +L H L+ G+C++ ++ +Y+
Sbjct: 27 GKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N L Y+ + L+ + + + +G+ +L+ + +HRDL A N L+D +
Sbjct: 86 SNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRD 140
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+ K+SDFGM R D+ ++ G + PE YS K DV+++G+L+ ++
Sbjct: 141 LCVKVSDFGMTRYVLDDQYVSSVGTKFPV-KWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 73 DFYIFDLRRRYL---------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKAS 120
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+G
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 181 VLLLQIL 187
VLL +I
Sbjct: 238 VLLWEIF 244
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 50/270 (18%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+AVK L S L + +E + ++ H +++ + G C+Q +LI +Y SL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 75 YIFDLRR---RYL----------LDWRTRVHIIEG--------ITQGLLYLQEYSNLTIV 113
++ + R+ YL LD + G I+QG+ YL E + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 114 HRDLKASNILLDYEMNPKISDFGMARAFTKDE--CEANTGRIVGTYGYVPPEYVRKGIYS 171
HRDL A NIL+ KISDFG++R +++ + + GRI ++ E + IY+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI--PVKWMAIESLFDHIYT 230
Query: 172 MKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDS 228
+ DV+S+GVLL +I LGG + Y G P E L + L K G ME D+ S
Sbjct: 231 TQSDVWSFGVLLWEIVTLGG---NPYPGIPPERL------FNLLKTGHRMERPDNC---S 278
Query: 229 SSAWKLMRCMQVALLCVQENAADRPTMLEI 258
++LM L C ++ RP +I
Sbjct: 279 EEMYRLM------LQCWKQEPDKRPVFADI 302
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 27/243 (11%)
Query: 31 EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD---- 86
EF NE + +++ +LG+ +Q + ++I + M L Y+ LR +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 87 ---WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK 143
+ + I G+ YL VHRDL A N + + KI DFGM R +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+ G+ + ++ PE ++ G+++ DV+S+GV+L +I
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------AT 222
Query: 204 LLEYAYGLWKNGEGMEFI-DSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
L E Y N + + F+ + L D M +++ +C Q N RP+ LEI+ +
Sbjct: 223 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLEIISSI 281
Query: 263 KSE 265
K E
Sbjct: 282 KEE 284
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 16 MAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+AVK T L+ +F E ++ + H N++ ++G+CTQ++ ++ + + + DF
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV--QGGDF 199
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
F L +T + ++ G+ YL+ + +HRDL A N L+ + KISD
Sbjct: 200 LTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISD 256
Query: 135 FGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FGM+R A+ G + PE + G YS + DV+S+G+LL +
Sbjct: 257 FGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 50/270 (18%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+AVK L S L + +E + ++ H +++ + G C+Q +LI +Y SL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 75 YIFDLRR---RYL----------LDWRTRVHIIEG--------ITQGLLYLQEYSNLTIV 113
++ + R+ YL LD + G I+QG+ YL E + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 114 HRDLKASNILLDYEMNPKISDFGMARAFTKDE--CEANTGRIVGTYGYVPPEYVRKGIYS 171
HRDL A NIL+ KISDFG++R +++ + + GRI ++ E + IY+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI--PVKWMAIESLFDHIYT 230
Query: 172 MKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDS 228
+ DV+S+GVLL +I LGG + Y G P E L + L K G ME D+ S
Sbjct: 231 TQSDVWSFGVLLWEIVTLGG---NPYPGIPPERL------FNLLKTGHRMERPDNC---S 278
Query: 229 SSAWKLMRCMQVALLCVQENAADRPTMLEI 258
++LM L C ++ RP +I
Sbjct: 279 EEMYRLM------LQCWKQEPDKRPVFADI 302
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKM-LIYDYMPNKS 71
G ++AVK + + + F E + +L+H NL+ +LG+ + + + ++ +YM S
Sbjct: 44 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L Y+ R R +L + + + + YL+ VHRDL A N+L+ + K
Sbjct: 102 LVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 157
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
+SDFG+ + + + +TG++ + PE +R+ +S K DV+S+G+LL +I
Sbjct: 158 VSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKM-LIYDYMPNKS 71
G ++AVK + + + F E + +L+H NL+ +LG+ + + + ++ +YM S
Sbjct: 29 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L Y+ R R +L + + + + YL+ VHRDL A N+L+ + K
Sbjct: 87 LVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 142
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
+SDFG+ + + + +TG++ + PE +R+ +S K DV+S+G+LL +I
Sbjct: 143 VSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 180 GVLLLQIL 187
GVLL +I
Sbjct: 237 GVLLWEIF 244
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 10/207 (4%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+ G ++A+K L + E F E ++ +L+H L+ + + ++ E ++
Sbjct: 25 VWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVT 82
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
+YM SL ++ D R L V + + G+ Y++ + +HRDL+++NIL+
Sbjct: 83 EYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILV 138
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLL 184
+ KI+DFG+AR +E A G + PE G +++K DV+S+G+LL
Sbjct: 139 GNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLT 197
Query: 185 QILGGKRTSCYYGPN--ESLNLLEYAY 209
+++ R Y G N E L +E Y
Sbjct: 198 ELVTKGRVP-YPGMNNREVLEQVERGY 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 15 EMAVKRLSRTSHQG-LEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L + E +E+K+ +L H N++ +LG CT LI++Y L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 73 DFYIFDLRRRY--------------------LLDWRTRVHIIEGITQGLLYLQEYSNLTI 112
Y+ R ++ +L + + + +G+ +L+ S
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---C 193
Query: 113 VHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM 172
VHRDL A N+L+ + KI DFG+AR D G ++ PE + +GIY++
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 173 KYDVYSYGVLLLQIL 187
K DV+SYG+LL +I
Sbjct: 254 KSDVWSYGILLWEIF 268
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 180 GVLLLQIL 187
GVLL +I
Sbjct: 228 GVLLWEIF 235
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 33/263 (12%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I S P + + E K G M D + + Q
Sbjct: 228 GVLLWEIF-----SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------YQ 273
Query: 240 VALLCVQENAADRPTMLEILVML 262
L C + RPT E++ L
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 13 GQEMAVKRLS-RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMPN 69
G+++AVK L + + + + E+++ L H N++ GICT+ LI +++P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
SL Y+ + + ++ + ++ I +G+ YL + VHRDL A N+L++ E
Sbjct: 110 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQ 164
Query: 130 PKISDFGMARAFTKDE--CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
KI DFG+ +A D+ R + Y PE + + + + DV+S+GV L ++L
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 13 GQEMAVKRLS-RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMPN 69
G+++AVK L + + + + E+++ L H N++ GICT+ LI +++P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
SL Y+ + + ++ + ++ I +G+ YL + VHRDL A N+L++ E
Sbjct: 98 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQ 152
Query: 130 PKISDFGMARAFTKDE--CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
KI DFG+ +A D+ R + Y PE + + + + DV+S+GV L ++L
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKM-LIYDYMPNKS 71
G ++AVK + + + F E + +L+H NL+ +LG+ + + + ++ +YM S
Sbjct: 216 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L Y+ R R +L + + + + YL+ VHRDL A N+L+ + K
Sbjct: 274 LVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 329
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
+SDFG+ + + + +TG++ + PE +R+ +S K DV+S+G+LL +I
Sbjct: 330 VSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 15/186 (8%)
Query: 14 QEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNK 70
+ +AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 71 SLDFYIFDLRRRYL------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKASN 121
+L Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
ILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+GV
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 182 LLLQIL 187
LL +I
Sbjct: 235 LLWEIF 240
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 30 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGS 88
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L ++ +YL V + I G+ Y++ + VHRDL+A+NIL+ + K
Sbjct: 89 LLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 144
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 145 VADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 180 GVLLLQIL 187
GVLL +I
Sbjct: 237 GVLLWEIF 244
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 13 GQEMAVK-----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
GQE A K +LS HQ LE E ++ L+H N++ + ++ LI+D +
Sbjct: 47 GQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 103
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
L D+ R H I+ I + +L+ + + +VHRDLK N+LL +
Sbjct: 104 TGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASK 157
Query: 128 MNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLL 184
+ K++DFG+A + E +A G GT GY+ PE +RK Y D+++ GV+L
Sbjct: 158 LKGAAVKLADFGLAIE-VEGEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 215
Query: 185 QILGG 189
+L G
Sbjct: 216 ILLVG 220
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L L+ N +V+RDLK +NILLD + +ISD G+A F+K + A+ VGT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 161 PPEYVRKGI-YSMKYDVYSYGVLLLQILGG 189
PE ++KG+ Y D +S G +L ++L G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L L+ N +V+RDLK +NILLD + +ISD G+A F+K + A+ VGT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 161 PPEYVRKGI-YSMKYDVYSYGVLLLQILGG 189
PE ++KG+ Y D +S G +L ++L G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGS 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L L+ N +V+RDLK +NILLD + +ISD G+A F+K + A+ VGT+GY+
Sbjct: 301 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 356
Query: 161 PPEYVRKGI-YSMKYDVYSYGVLLLQILGG 189
PE ++KG+ Y D +S G +L ++L G
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L L+ N +V+RDLK +NILLD + +ISD G+A F+K + A+ VGT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 161 PPEYVRKGI-YSMKYDVYSYGVLLLQILGG 189
PE ++KG+ Y D +S G +L ++L G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPN 69
G +AVK+L + +F+ E+++ L ++ G+ R+ L+ +Y+P+
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L ++ R R LD + I +G+ YL + VHRDL A NIL++ E +
Sbjct: 111 GCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 165
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLL 184
KI+DFG+A+ D+ +V G P PE + I+S + DV+S+GV+L
Sbjct: 166 VKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221
Query: 185 QILGGKRTSC 194
++ SC
Sbjct: 222 ELFTYCDKSC 231
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPN 69
G +AVK+L + +F+ E+++ L ++ G+ R+ L+ +Y+P+
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L ++ R R LD + I +G+ YL + VHRDL A NIL++ E +
Sbjct: 98 GCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 152
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLL 184
KI+DFG+A+ D+ +V G P PE + I+S + DV+S+GV+L
Sbjct: 153 VKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 208
Query: 185 QILGGKRTSC 194
++ SC
Sbjct: 209 ELFTYCDKSC 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 46/277 (16%)
Query: 15 EMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
+ A+KR+ S +F E+++ +L H N++ +LG C R L +Y P+ +L
Sbjct: 51 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
Query: 73 -DFYIFDLRRRYLLDW----------------RTRVHIIEGITQGLLYLQEYSNLTIVHR 115
DF LR+ +L+ + +H + +G+ YL S +HR
Sbjct: 111 LDF----LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHR 163
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
+L A NIL+ KI+DFG++R + + GR+ ++ E + +Y+ D
Sbjct: 164 NLAARNILVGENYVAKIADFGLSRG-QEVYVKKTMGRL--PVRWMAIESLNYSVYTTNSD 220
Query: 176 VYSYGVLLLQILG-GKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKL 234
V+SYGVLL +I+ G C E L Y L + L+ + L
Sbjct: 221 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL----------EKPLNCDDEVYDL 270
Query: 235 MRCMQVALLCVQENAADRPTMLEILVMLKSETADIKT 271
MR C +E +RP+ +ILV L + KT
Sbjct: 271 MR------QCWREKPYERPSFAQILVSLNRMLEERKT 301
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC--TQREEKMLIYDYMPN 69
G +AVK+L + +F+ E+++ L ++ G+ R+ L+ +Y+P+
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L ++ R R LD + I +G+ YL + VHRDL A NIL++ E +
Sbjct: 99 GCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 153
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLL 184
KI+DFG+A+ D+ +V G P PE + I+S + DV+S+GV+L
Sbjct: 154 VKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 209
Query: 185 QILGGKRTSC 194
++ SC
Sbjct: 210 ELFTYCDKSC 219
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 43/241 (17%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-D 73
++AVK + + +E F E + LQH L+ + + T +E +I ++M SL D
Sbjct: 208 KVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 265
Query: 74 FYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKIS 133
F D + L + I +G+ ++++ + +HRDL+A+NIL+ + KI+
Sbjct: 266 FLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIA 320
Query: 134 DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTS 193
DFG+AR K + + PE + G +++K DV+S+G+LL++I+ R
Sbjct: 321 DFGLARVGAKFPIK-----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
Query: 194 CYYGPN--ESLNLLEYAYGL-----------------WKN----GEGMEFIDSSLDDSSS 230
Y G + E + LE Y + WKN E+I S LDD +
Sbjct: 370 -YPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 428
Query: 231 A 231
A
Sbjct: 429 A 429
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 12 NGQEMAVKRLS--RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G E A K ++ + S + ++ E E ++ +LQH N++ + + L++D +
Sbjct: 29 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 88
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L D+ R H I+ I + + Y +SN IVHR+LK N+LL +
Sbjct: 89 GEL---FEDIVAREFYSEADASHCIQQILESIAYC--HSN-GIVHRNLKPENLLLASKAK 142
Query: 130 P---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+A ++ EA G GT GY+ PE ++K YS D+++ GV+L +
Sbjct: 143 GAAVKLADFGLA--IEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 199
Query: 187 LGG 189
L G
Sbjct: 200 LVG 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 31 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 89
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 90 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 144
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 145 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 12 NGQEMAVKRLS--RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G E A K ++ + S + ++ E E ++ +LQH N++ + + L++D +
Sbjct: 30 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L D+ R H I+ I + + Y +SN IVHR+LK N+LL +
Sbjct: 90 GEL---FEDIVAREFYSEADASHCIQQILESIAYC--HSN-GIVHRNLKPENLLLASKAK 143
Query: 130 P---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+A ++ EA G GT GY+ PE ++K YS D+++ GV+L +
Sbjct: 144 GAAVKLADFGLA--IEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 200
Query: 187 LGG 189
L G
Sbjct: 201 LVG 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 29 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 87
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 88 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 142
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 143 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGS 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 12 NGQEMAVKRLS--RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G E A K ++ + S + ++ E E ++ +LQH N++ + + L++D +
Sbjct: 30 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L D+ R H I+ I + + Y +SN IVHR+LK N+LL +
Sbjct: 90 GEL---FEDIVAREFYSEADASHCIQQILESIAYC--HSN-GIVHRNLKPENLLLASKAK 143
Query: 130 P---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+A ++ EA G GT GY+ PE ++K YS D+++ GV+L +
Sbjct: 144 GAAVKLADFGLA--IEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 200
Query: 187 LGG 189
L G
Sbjct: 201 LVG 203
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 180 GVLLLQIL 187
GVLL +I
Sbjct: 239 GVLLWEIF 246
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 180 GVLLLQIL 187
GVLL +I
Sbjct: 237 GVLLWEIF 244
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
GQE+A+++++ E NE+ + ++ N++ L +E ++ +Y+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
D+ +D + Q L +L +SN ++HRD+K+ NILL + + K+
Sbjct: 105 T----DVVTETCMDEGQIAAVCRECLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKL 157
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRT 192
+DFG T ++ + +T +VGT ++ PE V + Y K D++S G++ ++++ G+
Sbjct: 158 TDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 193 SCYYGPNESLNLL 205
P +L L+
Sbjct: 216 YLNENPLRALYLI 228
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
E F E ++ +L+H L+ + + ++ E ++ +YM SL ++ +YL
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYL-RLPQ 364
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
V + I G+ Y++ + VHRDL+A+NIL+ + K++DFG+AR +E A
Sbjct: 365 LVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421
Query: 150 TGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
G + PE G +++K DV+S+G+LL ++
Sbjct: 422 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 14/182 (7%)
Query: 13 GQEMAVKRLS--RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G E A K ++ + S + ++ E E ++ +LQH N++ + + L++D +
Sbjct: 54 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L D+ R H I+ I + + Y +SN IVHR+LK N+LL +
Sbjct: 114 EL---FEDIVAREFYSEADASHCIQQILESIAYC--HSN-GIVHRNLKPENLLLASKAKG 167
Query: 131 ---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
K++DFG+A ++ EA G GT GY+ PE ++K YS D+++ GV+L +L
Sbjct: 168 AAVKLADFGLA--IEVNDSEAWHG-FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
Query: 188 GG 189
G
Sbjct: 225 VG 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 26/262 (9%)
Query: 11 PNGQEMAVKRLSRTSHQ-GLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P +++A+KR++ Q ++E E++ ++ H N++ ++E L+ +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 70 KSLDFYIFDL-----RRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
S+ I + + +LD T I+ + +GL YL + +HRD+KA NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 125 DYEMNPKISDFGMARAF--TKDECEANTGR--IVGTYGYVPPEYVR--KGIYSMKYDVYS 178
+ + +I+DFG++ AF T + N R VGT ++ PE + +G Y K D++S
Sbjct: 150 GEDGSVQIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWS 207
Query: 179 YGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCM 238
+G+ +++ G Y P + L L L + +E + + D K +
Sbjct: 208 FGITAIELATGAAPYHKYPPMKVLMLT-----LQNDPPSLE---TGVQDKEMLKKYGKSF 259
Query: 239 QVAL-LCVQENAADRPTMLEIL 259
+ + LC+Q++ RPT E+L
Sbjct: 260 RKMISLCLQKDPEKRPTAAELL 281
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGS 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 33 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 91
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L ++ +YL V + I G+ Y++ + VHRDL+A+NIL+ + K
Sbjct: 92 LLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 147
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 148 VADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 180 GVLLLQIL 187
GVLL +I
Sbjct: 274 GVLLWEIF 281
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 33/263 (12%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I S P + + E K G M D + + Q
Sbjct: 228 GVLLWEIF-----SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------YQ 273
Query: 240 VALLCVQENAADRPTMLEILVML 262
L C + RPT E++ L
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 97
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 148
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 206
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 207 YGVTVWELM 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 33/263 (12%)
Query: 16 MAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEK-MLIYDYMPNKSL 72
+AVK L +H +E+K+ + H+N++ +LG CT+ M+I ++ +L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 73 DFYIFDLRRRYL----------LDWRTRVHII---EGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R ++ D+ T H+I + +G+ +L ++ +HRDL A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
NILL + KI DFG+AR KD G ++ PE + +Y+++ DV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQ 239
GVLL +I S P + + E K G M D + + Q
Sbjct: 228 GVLLWEIF-----SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------YQ 273
Query: 240 VALLCVQENAADRPTMLEILVML 262
L C + RPT E++ L
Sbjct: 274 TMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 12 NGQEMAVKRLSRTSHQGLE---EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
G ++AVK L+R + L+ + E++ +H +++ + + + + ++ +Y+
Sbjct: 40 TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L YI R LD + + + I G+ Y + +VHRDLK N+LLD M
Sbjct: 100 GGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHM 153
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYS-MKYDVYSYGVLLLQIL 187
N KI+DFG++ + E + G+ Y PE + +Y+ + D++S GV+L +L
Sbjct: 154 NAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210
Query: 188 GG 189
G
Sbjct: 211 CG 212
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 12 NGQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G+E+A+K + +T + L++ EV++ L H N++ + + + LI +Y
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ Y+ R + R++ I Q Y + IVHRDLKA N+LLD +MN
Sbjct: 96 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQKR---IVHRDLKAENLLLDADMN 149
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILG 188
KI+DFG + FT G+ Y PE + Y + DV+S GV+L ++
Sbjct: 150 IKIADFGFSNEFT---VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
Query: 189 G 189
G
Sbjct: 207 G 207
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 102
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 153
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 211
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 212 YGVTVWELM 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 146
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 205 YGVTVWELM 213
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 96
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 97 QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 147
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 205
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 206 YGVTVWELM 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 34 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 92
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 93 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEGMNYLEDRR---LVHRDLAAR 143
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 144 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 201
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 202 YGVTVWELM 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 99
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 100 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 150
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 151 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 208
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 209 YGVTVWELM 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 96
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 97 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 147
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 205
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 206 YGVTVWELM 214
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
E F E ++ +L+H L+ + + ++ E ++ +YM SL ++ +YL
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYL-RLPQ 281
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
V + I G+ Y++ + VHRDL+A+NIL+ + K++DFG+AR +E A
Sbjct: 282 LVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 150 TGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
G + PE G +++K DV+S+G+LL ++
Sbjct: 339 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
E F E ++ +L+H L+ + + ++ E ++ +YM SL ++ +YL
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYL-RLPQ 281
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
V + I G+ Y++ + VHRDL+A+NIL+ + K++DFG+AR +E A
Sbjct: 282 LVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 150 TGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
G + PE G +++K DV+S+G+LL ++
Sbjct: 339 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 102
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 153
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 211
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 212 YGVTVWELM 220
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 207 NGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 265
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 266 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 320
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+ R +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 321 KVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 98
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 149
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 208 YGVTVWELM 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 43 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 101
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 102 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 152
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 153 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 210
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 211 YGVTVWELM 219
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 102
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 153
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 211
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 212 YGVTVWELM 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 26/262 (9%)
Query: 11 PNGQEMAVKRLSRTSHQ-GLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P +++A+KR++ Q ++E E++ ++ H N++ ++E L+ +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 70 KSLDFYIFDL-----RRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
S+ I + + +LD T I+ + +GL YL + +HRD+KA NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 125 DYEMNPKISDFGMARAF--TKDECEANTGR--IVGTYGYVPPEYVR--KGIYSMKYDVYS 178
+ + +I+DFG++ AF T + N R VGT ++ PE + +G Y K D++S
Sbjct: 155 GEDGSVQIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWS 212
Query: 179 YGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCM 238
+G+ +++ G Y P + L L L + +E + + D K +
Sbjct: 213 FGITAIELATGAAPYHKYPPMKVLMLT-----LQNDPPSLE---TGVQDKEMLKKYGKSF 264
Query: 239 QVAL-LCVQENAADRPTMLEIL 259
+ + LC+Q++ RPT E+L
Sbjct: 265 RKMISLCLQKDPEKRPTAAELL 286
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+A+K + +T + L++ EV++ L H N++ + + + LI +Y
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R++ I Q Y + IVHRDLKA N+LLD +MN
Sbjct: 100 EVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQKR---IVHRDLKAENLLLDADMNI 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILGG 189
KI+DFG + FT G Y PE + Y + DV+S GV+L ++ G
Sbjct: 154 KIADFGFSNEFT---VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 37 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGS 95
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L ++ +YL V + I G+ Y++ + VHRDL+A+NIL+ + K
Sbjct: 96 LLDFLKGETGKYL-RLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 151
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 152 VADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 98
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 149
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 208 YGVTVWELM 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 95
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 146
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 205 YGVTVWELM 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 98
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 149
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 208 YGVTVWELM 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 146
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 205 YGVTVWELM 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 97
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 148
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 206
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 207 YGVTVWELM 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 98
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 149
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 208 YGVTVWELM 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 5 ICQGRLPNGQEM-AVKRLSRTSHQG-------LEEFENEVKLTARLQHVNLLPVLGICTQ 56
+ +GRL + + A+K L +G +EF+ EV + + L H N++ + G+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--M 92
Query: 57 REEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
++ +++P D Y L + + + W ++ ++ I G+ Y+Q N IVHRD
Sbjct: 93 HNPPRMVMEFVPCG--DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRD 149
Query: 117 LKASNILLDY--EMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV--RKGI 169
L++ NI L E P K++DFG T + + ++G + ++ PE + +
Sbjct: 150 LRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 170 YSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYG 210
Y+ K D YS+ ++L IL G+ GP + EY+YG
Sbjct: 205 YTEKADTYSFAMILYTILTGE------GPFD-----EYSYG 234
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 31 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 89
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 90 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 140
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 198
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 199 YGVTVWELM 207
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 96 QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 146
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 205 YGVTVWELM 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 146
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 205 YGVTVWELM 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFEN---EVKLTARLQHVNLLPVLGICTQREE 59
V +C+ ++ GQE AVK +S+ + + E+ EV+L +L H N++ + +
Sbjct: 42 VILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 100
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + L I +R +D II + G+ Y+ + IVHRDLK
Sbjct: 101 FYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKP 154
Query: 120 SNILLDY---EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
N+LL+ + N +I DFG++ F E +GT Y+ PE V G Y K DV
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDV 210
Query: 177 YSYGVLLLQILGGKRTSC--YYGPNE 200
+S GV+L +L G C + G NE
Sbjct: 211 WSTGVILYILLSG----CPPFNGANE 232
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
E F E ++ +L+H L+ + + ++ E ++ +YM SL ++ +YL
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYL-RLPQ 281
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
V + I G+ Y++ + VHRDL+A+NIL+ + K++DFG+AR +E A
Sbjct: 282 LVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 150 TGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
G + PE G +++K DV+S+G+LL ++
Sbjct: 339 QGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +++H L+ + + ++ E ++ +YM S
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 36/221 (16%)
Query: 5 ICQGRLPNGQEM-AVKRLSRTSHQG-------LEEFENEVKLTARLQHVNLLPVLGICTQ 56
+ +GRL + + A+K L +G +EF+ EV + + L H N++ + G+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--M 92
Query: 57 REEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
++ +++P D Y L + + + W ++ ++ I G+ Y+Q N IVHRD
Sbjct: 93 HNPPRMVMEFVPCG--DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRD 149
Query: 117 LKASNILLDY--EMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV--RKGI 169
L++ NI L E P K++DFG+++ + + ++G + ++ PE + +
Sbjct: 150 LRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 170 YSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYG 210
Y+ K D YS+ ++L IL G+ GP + EY+YG
Sbjct: 205 YTEKADTYSFAMILYTILTGE------GPFD-----EYSYG 234
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 47 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 105
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 106 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 156
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 157 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 214
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 215 YGVTVWELM 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 15 EMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLD 73
++A+K L + + + EE E ++ +L + ++ ++G+C Q E ML+ + L
Sbjct: 39 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL- 96
Query: 74 FYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKIS 133
+ F + +R + ++ ++ G+ YL+E + VHRDL A N+LL KIS
Sbjct: 97 -HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKIS 152
Query: 134 DFGMARAFTKDECEANTGRIVGTY--GYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
DFG+++A D+ T R G + + PE + +S + DV+SYGV + + L
Sbjct: 153 DFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 62 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 120
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 121 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 171
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 172 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 229
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 230 YGVTVWELM 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 13 GQEMAV-----KRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
GQE A K+LS HQ LE E ++ L+H N++ + ++ LI+D +
Sbjct: 36 GQEYAAMIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 92
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
L D+ R H I+ I + +L+ + + +VHR+LK N+LL +
Sbjct: 93 TGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASK 146
Query: 128 MNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLL 184
+ K++DFG+A + E +A G GT GY+ PE +RK Y D+++ GV+L
Sbjct: 147 LKGAAVKLADFGLAIE-VEGEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 204
Query: 185 QILGG 189
+L G
Sbjct: 205 ILLVG 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFEN---EVKLTARLQHVNLLPVLGICTQREE 59
V +C+ ++ GQE AVK +S+ + + E+ EV+L +L H N++ + +
Sbjct: 65 VILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 123
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + L I +R +D II + G+ Y+ + IVHRDLK
Sbjct: 124 FYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKP 177
Query: 120 SNILLDY---EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
N+LL+ + N +I DFG++ F E +GT Y+ PE V G Y K DV
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDV 233
Query: 177 YSYGVLLLQILGGKRTSC--YYGPNE 200
+S GV+L +L G C + G NE
Sbjct: 234 WSTGVILYILLSG----CPPFNGANE 255
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM S
Sbjct: 37 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGS 95
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L ++ +YL V + I G+ Y++ + VHRDL+A+NIL+ + K
Sbjct: 96 LLDFLKGETGKYL-RLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 151
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 152 VADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
DL R D +++ I +GL YL +HRD+KA+N+LL + + K++DFG
Sbjct: 109 LDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFG 165
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYY 196
+A T + + NT VGT ++ PE +++ Y K D++S G+ +++ G+
Sbjct: 166 VAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP----- 218
Query: 197 GPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTML 256
PN ++ + + + KN + + D + ++K + C+ ++ + RPT
Sbjct: 219 -PNSDMHPMRVLFLIPKNNP-----PTLVGDFTKSFK-----EFIDACLNKDPSFRPTAK 267
Query: 257 EIL 259
E+L
Sbjct: 268 ELL 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 47/256 (18%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN---EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
N + +A+K++S + Q E++++ EV+ +L+H N + G + L+ +Y
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
+ D + ++ ++ L + + G QGL YL ++ ++HRD+KA NILL
Sbjct: 138 GSASD--LLEVHKKPLQEVEIAA-VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPG 191
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV---RKGIYSMKYDVYSYGVLLLQ 185
K+ DFG A A VGT ++ PE + +G Y K DV+S G+ ++
Sbjct: 192 LVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 245
Query: 186 ILGGKRTSCYYGPNESLNLLEYAYGLWKN-------GEGMEFIDSSLDDSSSAWKLMRCM 238
+ K P ++N + Y + +N G E+ + +D
Sbjct: 246 LAERK------PPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS----------- 288
Query: 239 QVALLCVQENAADRPT 254
C+Q+ DRPT
Sbjct: 289 -----CLQKIPQDRPT 299
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFEN---EVKLTARLQHVNLLPVLGICTQREE 59
V +C+ ++ GQE AVK +S+ + + E+ EV+L +L H N++ + +
Sbjct: 66 VILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 124
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + L I +R +D II + G+ Y+ + IVHRDLK
Sbjct: 125 FYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKP 178
Query: 120 SNILLDY---EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
N+LL+ + N +I DFG++ F E +GT Y+ PE V G Y K DV
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDV 234
Query: 177 YSYGVLLLQILGGKRTSC--YYGPNE 200
+S GV+L +L G C + G NE
Sbjct: 235 WSTGVILYILLSG----CPPFNGANE 256
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AVK + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R + I Q Y + IVHRDLKA N+LLD +MN
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 131 KISDFGMARAFT-KDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILG 188
KI+DFG + FT ++ +A G Y PE + Y + DV+S GV+L ++
Sbjct: 153 KIADFGFSNEFTFGNKLDA----FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 189 G 189
G
Sbjct: 209 G 209
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 47/256 (18%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN---EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
N + +A+K++S + Q E++++ EV+ +L+H N + G + L+ +Y
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
+ D + ++ ++ L + + G QGL YL ++ ++HRD+KA NILL
Sbjct: 99 GSASD--LLEVHKKPLQEVEIAA-VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPG 152
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV---RKGIYSMKYDVYSYGVLLLQ 185
K+ DFG A A VGT ++ PE + +G Y K DV+S G+ ++
Sbjct: 153 LVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 186 ILGGKRTSCYYGPNESLNLLEYAYGLWKN-------GEGMEFIDSSLDDSSSAWKLMRCM 238
+ K P ++N + Y + +N G E+ + +D
Sbjct: 207 LAERK------PPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS----------- 249
Query: 239 QVALLCVQENAADRPT 254
C+Q+ DRPT
Sbjct: 250 -----CLQKIPQDRPT 260
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AVK + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 71 SLDFYIFDLRRRYLL--DWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
+FD YL+ W Q + +Q IVHRDLKA N+LLD +M
Sbjct: 92 E----VFD----YLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 143
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQIL 187
N KI+DFG + FT G+ Y PE + Y + DV+S GV+L ++
Sbjct: 144 NIKIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 200
Query: 188 GG 189
G
Sbjct: 201 SG 202
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AVK + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R + I Q Y + IVHRDLKA N+LLD +MN
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILGG 189
KI+DFG + FT G+ Y PE + Y + DV+S GV+L ++ G
Sbjct: 153 KIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 1 MSVAICQGRLPNGQEMAVKRLSR---TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQR 57
S + L +E A+K L + + E + +RL H + L C Q
Sbjct: 50 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LYFCFQD 108
Query: 58 EEKMLI-YDYMPNKSLDFYIFDLRRRYLLDWR-TRVHIIEGITQGLLYLQEYSNLTIVHR 115
+EK+ Y N L YI R+ D TR + E I L YL I+HR
Sbjct: 109 DEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAE-IVSALEYLH---GKGIIHR 161
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
DLK NILL+ +M+ +I+DFG A+ + + +A VGT YV PE + + D
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 221
Query: 176 VYSYGVLLLQILGG 189
+++ G ++ Q++ G
Sbjct: 222 LWALGCIIYQLVAG 235
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AVK + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R + I Q Q+Y IVHRDLKA N+LLD +MN
Sbjct: 100 EVFDYLVAHGRMKEKEARAKFRQIVSAVQ--YCHQKY----IVHRDLKAENLLLDGDMNI 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILGG 189
KI+DFG + FT G+ Y PE + Y + DV+S GV+L ++ G
Sbjct: 154 KIADFGFSNEFT---VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AVK + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R + I Q Y + IVHRDLKA N+LLD +MN
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILGG 189
KI+DFG + FT G+ Y PE + Y + DV+S GV+L ++ G
Sbjct: 153 KIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 9 RLPNGQEMAVK-----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLI 63
++P GQE A K +LS HQ LE E ++ L+H N++ + ++ L+
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGFHYLV 81
Query: 64 YDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLT-IVHRDLKASNI 122
+D + L D+ R H I+ I + + + +L IVHRDLK N+
Sbjct: 82 FDLVTGGEL---FEDIVAREYYSEADASHCIQQILESV----NHCHLNGIVHRDLKPENL 134
Query: 123 LLDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL + K++DFG+A D+ +A G GT GY+ PE +RK Y D+++
Sbjct: 135 LLASKSKGAAVKLADFGLAIEVQGDQ-QAWFG-FAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 180 GVLLLQILGG 189
GV+L +L G
Sbjct: 193 GVILYILLVG 202
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGC 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
NG + + E F E ++ +L+H L+ + + ++ E ++ +YM
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGC 98
Query: 72 L-DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L DF ++ + L V + I G+ Y++ + VHRDL+A+NIL+ +
Sbjct: 99 LLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
K++DFG+AR +E A G + PE G +++K DV+S+G+LL ++
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFEN---EVKLTARLQHVNLLPVLGICTQREE 59
V +C+ ++ GQE AVK +S+ + + E+ EV+L +L H N++ + +
Sbjct: 48 VILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 106
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + L I +R +D II + G+ Y+ + IVHRDLK
Sbjct: 107 FYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKP 160
Query: 120 SNILLD---YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
N+LL+ + N +I DFG++ F E +GT Y+ PE V G Y K DV
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDV 216
Query: 177 YSYGVLLLQILGGKRTSCYYGPNE 200
+S GV+L +L G + G NE
Sbjct: 217 WSTGVILYILLSG--CPPFNGANE 238
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
GQE+A+++++ E NE+ + ++ N++ L +E ++ +Y+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
D+ +D + Q L +L +SN ++HRD+K+ NILL + + K+
Sbjct: 105 T----DVVTETCMDEGQIAAVCRECLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKL 157
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRT 192
+DFG T + ++ +VGT ++ PE V + Y K D++S G++ ++++ G+
Sbjct: 158 TDFGFCAQITPE--QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 193 SCYYGPNESLNLL 205
P +L L+
Sbjct: 216 YLNENPLRALYLI 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 39/207 (18%)
Query: 4 AICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLI 63
AI + RLPN +E+A +++ R EVK A+L+H ++ ++ +
Sbjct: 34 AIKRIRLPN-RELAREKVMR-----------EVKALAKLEHPGIVRYFNAWLEKNTTEKL 81
Query: 64 YDYMPNKSLDFYIFDLRRRYLLDW---------RTR---VHIIEGITQGLLYLQEYSNLT 111
P L + R+ L DW R R +HI I + + +L
Sbjct: 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--- 138
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA-----------NTGRIVGTYGYV 160
++HRDLK SNI + K+ DFG+ A +DE E +TG+ VGT Y+
Sbjct: 139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ-VGTKLYM 197
Query: 161 PPEYVRKGIYSMKYDVYSYGVLLLQIL 187
PE + YS K D++S G++L ++L
Sbjct: 198 SPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 28/195 (14%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G E AVK + T+ + E EV+ R + L V G + + D + S
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG----HPHIITLIDSYESSS 173
Query: 72 LDFYIFDLRRR-YLLDWRT-RVHIIEGITQGLL--YLQEYSNL---TIVHRDLKASNILL 124
F +FDL R+ L D+ T +V + E T+ ++ L+ S L IVHRDLK NILL
Sbjct: 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
Query: 125 DYEMNPKISDFGMARAFTKDECEANTG----RIVGTYGYVPPEYVRKGI------YSMKY 174
D M ++SDFG + C G + GT GY+ PE ++ + Y +
Sbjct: 234 DDNMQIRLSDFGFS-------CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 175 DVYSYGVLLLQILGG 189
D+++ GV+L +L G
Sbjct: 287 DLWACGVILFTLLAG 301
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 9 RLPNGQEMAVK-----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLI 63
++P GQE A K +LS HQ LE E ++ L+H N++ + ++ L+
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGFHYLV 81
Query: 64 YDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLT-IVHRDLKASNI 122
+D + L D+ R H I+ I + + + +L IVHRDLK N+
Sbjct: 82 FDLVTGGEL---FEDIVAREYYSEADASHCIQQILESV----NHCHLNGIVHRDLKPENL 134
Query: 123 LLDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
LL + K++DFG+A D+ +A G GT GY+ PE +RK Y D+++
Sbjct: 135 LLASKSKGAAVKLADFGLAIEVQGDQ-QAWFG-FAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 180 GVLLLQILGG 189
GV+L +L G
Sbjct: 193 GVILYILLVG 202
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 99
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 100 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 150
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 151 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 208
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 209 YGVTVWELM 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 97
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 148
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 206
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 207 YGVTVWELM 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + NT ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
GQE+A+++++ E NE+ + ++ N++ L +E ++ +Y+ SL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
D+ +D + Q L +L +SN ++HR++K+ NILL + + K+
Sbjct: 106 T----DVVTETCMDEGQIAAVCRECLQALEFL--HSN-QVIHRNIKSDNILLGMDGSVKL 158
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRT 192
+DFG T ++ + +T +VGT ++ PE V + Y K D++S G++ ++++ G+
Sbjct: 159 TDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 193 SCYYGPNESLNLL 205
P +L L+
Sbjct: 217 YLNENPLRALYLI 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 97
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 148
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 206
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 207 YGVTVWELM 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 102
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 153
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 154 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 211
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 212 YGVTVWELM 220
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSXQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 146
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 147 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 205 YGVTVWELM 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
GQE+A+++++ E NE+ + ++ N++ L +E ++ +Y+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
D+ +D + Q L +L +SN ++HRD+K+ NILL + + K+
Sbjct: 105 T----DVVTETCMDEGQIAAVCRECLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKL 157
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRT 192
+DFG T + ++ +VGT ++ PE V + Y K D++S G++ ++++ G+
Sbjct: 158 TDFGFCAQITPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 193 SCYYGPNESLNLL 205
P +L L+
Sbjct: 216 YLNENPLRALYLI 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
GQE+A+++++ E NE+ + ++ N++ L +E ++ +Y+ SL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
D+ +D + Q L +L +SN ++HRD+K+ NILL + + K+
Sbjct: 106 T----DVVTETCMDEGQIAAVCRECLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKL 158
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRT 192
+DFG T + ++ +VGT ++ PE V + Y K D++S G++ ++++ G+
Sbjct: 159 TDFGFCAQITPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 193 SCYYGPNESLNLL 205
P +L L+
Sbjct: 217 YLNENPLRALYLI 229
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLN--------PWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 222
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 223 EKKTYLN--------PWKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P G+++ A+K L TS + +E +E + A + + ++ +LGIC + LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 97
Query: 65 DYMPNKSLDFYIFDLR----RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L Y+ + + +YLL+W + I +G+ YL++ +VHRDL A
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 148
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG A+ +E E A G++ ++ E + IY+ + DV+S
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 206
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 207 YGVTVWELM 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AV+ + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R + I Q Y + IVHRDLKA N+LLD +MN
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILGG 189
KI+DFG + FT G+ Y PE + Y + DV+S GV+L ++ G
Sbjct: 153 KIADFGFSNEFT---FGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 222
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 223 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 112 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 220
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 221 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 257
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGK 190
YV PE + R+ ++ DV+S G++L +L G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGK 190
YV PE + R+ ++ DV+S G++L +L G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 222
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 223 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 222
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 223 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 222
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 223 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 114 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 222
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 223 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 18/181 (9%)
Query: 13 GQEMAVK-----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
GQ++A+K L+++ QG E E+ L+H +++ + + ++E +++ +Y
Sbjct: 38 GQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 95
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N+ D+ + +R + + R + I + Y + IVHRDLK N+LLD
Sbjct: 96 GNELFDYIV---QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 148
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYS-MKYDVYSYGVLLLQI 186
+N KI+DFG++ T + G+ Y PE + +Y+ + DV+S GV+L +
Sbjct: 149 LNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205
Query: 187 L 187
L
Sbjct: 206 L 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ G++YL + I HRD+K N+LLD N KISDFG+A F + E ++ GT
Sbjct: 113 LMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 157 YGYVPPEYV-RKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
YV PE + R+ ++ DV+S G++L +L G+ + P++S Y WK
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQ----EYSDWK-- 221
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALL--CVQENAADRPTMLEI 258
E +++ WK + +ALL + EN + R T+ +I
Sbjct: 222 EKKTYLNP--------WKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 18/181 (9%)
Query: 13 GQEMAVK-----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
GQ++A+K L+++ QG E E+ L+H +++ + + ++E +++ +Y
Sbjct: 39 GQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 96
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N+ D+ + +R + + R + I + Y + IVHRDLK N+LLD
Sbjct: 97 GNELFDYIV---QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 149
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYS-MKYDVYSYGVLLLQI 186
+N KI+DFG++ T + G+ Y PE + +Y+ + DV+S GV+L +
Sbjct: 150 LNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 206
Query: 187 L 187
L
Sbjct: 207 L 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AV+ + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R + I Q Y + IVHRDLKA N+LLD +MN
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILGG 189
KI+DFG + FT G+ Y PE + Y + DV+S GV+L ++ G
Sbjct: 153 KIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 18/181 (9%)
Query: 13 GQEMAVK-----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
GQ++A+K L+++ QG E E+ L+H +++ + + ++E +++ +Y
Sbjct: 33 GQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 90
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N+ D+ + +R + + R + I + Y + IVHRDLK N+LLD
Sbjct: 91 GNELFDYIV---QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 143
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYS-MKYDVYSYGVLLLQI 186
+N KI+DFG++ T + G+ Y PE + +Y+ + DV+S GV+L +
Sbjct: 144 LNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 200
Query: 187 L 187
L
Sbjct: 201 L 201
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 18/181 (9%)
Query: 13 GQEMAVK-----RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
GQ++A+K L+++ QG E E+ L+H +++ + + ++E +++ +Y
Sbjct: 29 GQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 86
Query: 68 PNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
N+ D+ + +R + + R + I + Y + IVHRDLK N+LLD
Sbjct: 87 GNELFDYIV---QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 139
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYS-MKYDVYSYGVLLLQI 186
+N KI+DFG++ T + G+ Y PE + +Y+ + DV+S GV+L +
Sbjct: 140 LNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 196
Query: 187 L 187
L
Sbjct: 197 L 197
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 33 ENEVKLTARLQHVNLLPVLGICTQRE----EKMLIYDYMPNKSLDFYIFDLRRRYLLDWR 88
E E+ T ++H NLL + + E LI + SL Y+ + ++ W
Sbjct: 57 EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL----KGNIITWN 112
Query: 89 TRVHIIEGITQGLLYLQE--------YSNLTIVHRDLKASNILLDYEMNPKISDFGMARA 140
H+ E +++GL YL E +I HRD K+ N+LL ++ ++DFG+A
Sbjct: 113 ELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVR 172
Query: 141 FTKDECEANTGRIVGTYGYVPPEYVRKGI-----YSMKYDVYSYGVLLLQILGGKRTSCY 195
F + +T VGT Y+ PE + I ++ D+Y+ G++L +++ R
Sbjct: 173 FEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV--SRCKAA 230
Query: 196 YGP 198
GP
Sbjct: 231 DGP 233
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 15 EMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLD 73
++A+K L + + + EE E ++ +L + ++ ++G+C Q E ML+ + L
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL- 422
Query: 74 FYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKIS 133
+ F + +R + ++ ++ G+ YL+E + VHR+L A N+LL KIS
Sbjct: 423 -HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKIS 478
Query: 134 DFGMARAFTKDECEANTGRIVGTY--GYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
DFG+++A D+ T R G + + PE + +S + DV+SYGV + + L
Sbjct: 479 DFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFEN---EVKLTARLQHVNLLPVLGICTQREE 59
V +C+ ++ GQE AVK +S+ + + E+ EV+L +L H N+ + +
Sbjct: 42 VILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGY 100
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + L I +R +D II + G+ Y + IVHRDLK
Sbjct: 101 FYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYXHKNK---IVHRDLKP 154
Query: 120 SNILLDY---EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDV 176
N+LL+ + N +I DFG++ F E +GT Y+ PE V G Y K DV
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIAPE-VLHGTYDEKCDV 210
Query: 177 YSYGVLLLQILGGKRTSC--YYGPNE 200
+S GV+L +L G C + G NE
Sbjct: 211 WSTGVILYILLSG----CPPFNGANE 232
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 47 LLPVLGICTQREEKML-IYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ 105
L L C Q +++ + +++ L F+I RR + R R + E I L++L
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAE-IISALMFLH 141
Query: 106 EYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA-NTGRIVGTYGYVPPEY 164
+ I++RDLK N+LLD+E + K++DFGM + + C T GT Y+ PE
Sbjct: 142 DKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEI 195
Query: 165 VRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLN 203
+++ +Y D ++ GVLL ++L C + P E+ N
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEML------CGHAPFEAEN 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 134 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + S D+++ G ++ Q++ G
Sbjct: 190 RANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 107
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 108 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 156
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
C A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 157 CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLR--- 80
TS + +E +E + A + + ++ +LGIC + LI MP L Y+ + +
Sbjct: 90 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNI 148
Query: 81 -RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMAR 139
+YLL+W + I +G+ YL++ +VHRDL A N+L+ + KI+DFG+A+
Sbjct: 149 GSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 199
Query: 140 AFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+E E A G++ ++ E + IY+ + DV+SYGV + +++
Sbjct: 200 LLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWSYGVTVWELM 247
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 112
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 113 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 170 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 80 RRRYLLDWRTRV---------HIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
RRR LL+ R + + QG+ YL N ++HRDLK N+ L+ +M+
Sbjct: 125 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDV 181
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
KI DFG+A D T + GT Y+ PE + K +S + D++S G +L +L GK
Sbjct: 182 KIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 191 ---RTSC 194
TSC
Sbjct: 240 PPFETSC 246
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 36/221 (16%)
Query: 5 ICQGRLPNGQEM-AVKRLSRTSHQG-------LEEFENEVKLTARLQHVNLLPVLGICTQ 56
+ +GRL + + A+K L +G +EF+ EV + + L H N++ + G+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--M 92
Query: 57 REEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
++ +++P D Y L + + + W ++ ++ I G+ Y+Q N IVHRD
Sbjct: 93 HNPPRMVMEFVPCG--DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRD 149
Query: 117 LKASNILLDY--EMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV--RKGI 169
L++ NI L E P K++DF +++ + + ++G + ++ PE + +
Sbjct: 150 LRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 170 YSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYG 210
Y+ K D YS+ ++L IL G+ GP + EY+YG
Sbjct: 205 YTEKADTYSFAMILYTILTGE------GPFD-----EYSYG 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 19/128 (14%)
Query: 80 RRRYLLDWRTRV---------HIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
RRR LL+ R + + QG+ YL N ++HRDLK N+ L+ +M+
Sbjct: 125 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDV 181
Query: 131 KISDFGMARAFTKDECEANTGR-IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
KI DFG+A TK E + + + GT Y+ PE + K +S + D++S G +L +L G
Sbjct: 182 KIGDFGLA---TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 190 K---RTSC 194
K TSC
Sbjct: 239 KPPFETSC 246
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 19/128 (14%)
Query: 80 RRRYLLDWRTRV---------HIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
RRR LL+ R + + QG+ YL N ++HRDLK N+ L+ +M+
Sbjct: 125 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDV 181
Query: 131 KISDFGMARAFTKDECEANTGR-IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
KI DFG+A TK E + + + GT Y+ PE + K +S + D++S G +L +L G
Sbjct: 182 KIGDFGLA---TKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 190 K---RTSC 194
K TSC
Sbjct: 239 KPPFETSC 246
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 13 GQEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+E+AVK + +T + L++ EV++ L H N++ + + + L+ +Y
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ Y+ R + R + I Q Y + IVHRDLKA N+LLD + N
Sbjct: 99 EVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YCHQK---FIVHRDLKAENLLLDADXNI 152
Query: 131 KISDFGMARAFT-KDECEANTGRIVGTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILG 188
KI+DFG + FT ++ +A G Y PE + Y + DV+S GV+L ++
Sbjct: 153 KIADFGFSNEFTFGNKLDA----FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 189 G 189
G
Sbjct: 209 G 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 33 ENEVKLTARLQHVNLLPVLGI----CTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWR 88
E EV ++H N+L +G + + LI + SL D + ++ W
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLS----DFLKANVVSWN 121
Query: 89 TRVHIIEGITQGLLYLQE-------YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAF 141
HI E + +GL YL E I HRD+K+ N+LL + I+DFG+A F
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 142 TKDECEANTGRIVGTYGYVPPEYVRKGI-----YSMKYDVYSYGVLLLQILGGKRTSCYY 196
+ +T VGT Y+ PE + I ++ D+Y+ G++L ++ R +
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL--ASRCTAAD 239
Query: 197 GP 198
GP
Sbjct: 240 GP 241
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 93 IIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGR 152
I+ I +GL YL +HRD+KA+N+LL + + K++DFG+A T + + N
Sbjct: 121 ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX-- 175
Query: 153 IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLW 212
VGT ++ PE +++ Y K D++S G+ +++ G+ PN L+ + + +
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE------PPNSDLHPMRVLFLIP 229
Query: 213 KNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
KN +L+ S + C+ ++ RPT E+L
Sbjct: 230 KNSP------PTLEGQHSK----PFKEFVEACLNKDPRFRPTAKELL 266
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 2 SVAICQG--RLPNGQEMAVKRLSRTSHQGLEE--FENEVKLTARLQHVNLLPVLGICTQR 57
S CQ R +G+ + K L S E+ +EV L L+H N++ R
Sbjct: 18 SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 77
Query: 58 EEKML--IYDYMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSN--LTI 112
L + +Y L I + R LD + ++ +T L S+ T+
Sbjct: 78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV 137
Query: 113 VHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM 172
+HRDLK +N+ LD + N K+ DFG+AR D A T VGT Y+ PE + + Y+
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYNE 195
Query: 173 KYDVYSYGVLLLQI 186
K D++S G LL ++
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 239 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 286
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 287 D------CWHAVPSQRPTFKQLV 303
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 19/128 (14%)
Query: 80 RRRYLLDWRTRV---------HIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
RRR LL+ R + + QG+ YL N ++HRDLK N+ L+ +M+
Sbjct: 109 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDV 165
Query: 131 KISDFGMARAFTKDECEANTGR-IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
KI DFG+A TK E + + + GT Y+ PE + K +S + D++S G +L +L G
Sbjct: 166 KIGDFGLA---TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
Query: 190 K---RTSC 194
K TSC
Sbjct: 223 KPPFETSC 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 470
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 471 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 528 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 566
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 471
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 472 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 529 ----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 567
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 106
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 107 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 164 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
DL LD I+ I +GL YL +HRD+KA+N+LL K++DFG
Sbjct: 113 LDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG 169
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYY 196
+A T + + NT VGT ++ PE +++ Y K D++S G+ +++ G+
Sbjct: 170 VAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
Query: 197 GPNESLNLL 205
P + L L+
Sbjct: 228 HPMKVLFLI 236
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
DL LD I+ I +GL YL +HRD+KA+N+LL K++DFG
Sbjct: 93 LDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG 149
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYY 196
+A T + + NT VGT ++ PE +++ Y K D++S G+ +++ G+
Sbjct: 150 VAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Query: 197 GPNESLNLL 205
P + L L+
Sbjct: 208 HPMKVLFLI 216
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 118
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 119 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 176 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 108
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 109 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 166 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 204
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 112
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 113 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 170 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 208
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 126
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 127 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 184 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 222
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 16 MAVKRLSRTSH-QGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSLD 73
+AVK L ++H E +E+K+ + L H+N++ +LG CT ++I +Y L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 74 FYIFDLRRRYLLDWRTRVHIIEG----------------ITQGLLYLQEYSNLTIVHRDL 117
++ R ++ +T I+E + +G+ +L ++ +HRDL
Sbjct: 132 NFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 187
Query: 118 KASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVY 177
A NILL + KI DFG+AR D G ++ PE + +Y+ + DV+
Sbjct: 188 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 247
Query: 178 SYGVLLLQIL 187
SYG+ L ++
Sbjct: 248 SYGIFLWELF 257
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 23 RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLR-- 80
++ Q + + + L H +++ +LG+C + L+ Y+P SL ++ R
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA 129
Query: 81 --RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMA 138
+ LL+W + I +G+ YL+E+ +VHR+L A N+LL +++DFG+A
Sbjct: 130 LGPQLLLNWGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA 180
Query: 139 RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
D+ + ++ E + G Y+ + DV+SYGV + +++
Sbjct: 181 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 12 NGQEMAVKRLSRTSHQGLE---EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
G ++AVK L+R + L+ + + E++ +H +++ + + + + ++ +Y+
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L YI R ++ R + + I + Y + +VHRDLK N+LLD M
Sbjct: 95 GGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHM 148
Query: 129 NPKISDFGMAR-----AFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM-KYDVYSYGVL 182
N KI+DFG++ F +D C G+ Y PE + +Y+ + D++S GV+
Sbjct: 149 NAKIADFGLSNMMSDGEFLRDSC--------GSPNYAAPEVISGRLYAGPEVDIWSCGVI 200
Query: 183 LLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQV 240
L +L C P + E+ L+K G F + S A LM +QV
Sbjct: 201 LYALL------CGTLPFDD----EHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 102 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 219
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 220 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 278
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 279 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 326
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 327 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 356
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 43 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 102
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 103 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 160
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 161 -ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 219
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 220 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 267
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 268 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 297
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 128
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 129 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 186 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+E E + +L + ++ ++GIC + E ML+ + L+ Y+ + R++ D +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KN 128
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+ ++ ++ G+ YL+E SN VHRDL A N+LL + KISDFG+++A DE
Sbjct: 129 IIELVHQVSMGMKYLEE-SNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 150 TGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLLLQIL 187
T+G P PE + +S K DV+S+GVL+ +
Sbjct: 186 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 23 RTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLR-- 80
++ Q + + + L H +++ +LG+C + L+ Y+P SL ++ R
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA 111
Query: 81 --RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMA 138
+ LL+W + I +G+ YL+E+ +VHR+L A N+LL +++DFG+A
Sbjct: 112 LGPQLLLNWGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA 162
Query: 139 RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
D+ + ++ E + G Y+ + DV+SYGV + +++
Sbjct: 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 6 CQGRLPNGQEMA----VKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKM 61
C + P + A K+LS HQ LE E ++ L+H N++ + ++
Sbjct: 50 CVKKTPTQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGFHY 106
Query: 62 LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
L++D + L D+ R H I I + + ++ ++ IVHRDLK N
Sbjct: 107 LVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPEN 160
Query: 122 ILLDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
+LL + K++DFG+A + E +A G GT GY+ PE +RK Y D+++
Sbjct: 161 LLLASKCKGAAVKLADFGLAIE-VQGEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDIWA 218
Query: 179 YGVLLLQILGG 189
GV+L +L G
Sbjct: 219 CGVILYILLVG 229
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 16 MAVKRL--SRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
MA+K L S+ +G+E + E+++ + L+H N+L + R+ L+ ++ P L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
+L++ D + +E + L Y E ++HRD+K N+L+ Y+ KI
Sbjct: 103 ---YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKI 156
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+DFG ++ + GT Y+PPE + + K D++ GVL + L G
Sbjct: 157 ADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 16 MAVKRL--SRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
MA+K L S+ +G+E + E+++ + L+H N+L + R+ L+ ++ P L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
+L++ D + +E + L Y E ++HRD+K N+L+ Y+ KI
Sbjct: 102 ---YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKI 155
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+DFG ++ + GT Y+PPE + + K D++ GVL + L G
Sbjct: 156 ADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 51 LGICTQREEKML-IYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSN 109
L C Q E ++ + +Y+ L F++ R+R L + R + E I+ L YL E
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG- 173
Query: 110 LTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI 169
I++RDLK N+LLD E + K++D+GM + + T GT Y+ PE +R
Sbjct: 174 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSTFCGTPNYIAPEILRGED 229
Query: 170 YSMKYDVYSYGVLLLQILGGK 190
Y D ++ GVL+ +++ G+
Sbjct: 230 YGFSVDWWALGVLMFEMMAGR 250
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 16 MAVKRLSRTSH-QGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSLD 73
+AVK L ++H E +E+K+ + L H+N++ +LG CT ++I +Y L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 74 FYIFDLRRRYLLDWRTRVHIIEG----------------ITQGLLYLQEYSNLTIVHRDL 117
++ R ++ +T I+E + +G+ +L ++ +HRDL
Sbjct: 139 NFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 194
Query: 118 KASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVY 177
A NILL + KI DFG+AR D G ++ PE + +Y+ + DV+
Sbjct: 195 AARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 254
Query: 178 SYGVLLLQIL 187
SYG+ L ++
Sbjct: 255 SYGIFLWELF 264
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 16 MAVKRL--SRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
MA+K L S+ +G+E + E+++ + L+H N+L + R+ L+ ++ P L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
+L++ D + +E + L Y E ++HRD+K N+L+ Y+ KI
Sbjct: 102 ---YKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKI 155
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+DFG ++ + GT Y+PPE + + K D++ GVL + L G
Sbjct: 156 ADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 16 MAVKRLSRTSH-QGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSLD 73
+AVK L ++H E +E+K+ + L H+N++ +LG CT ++I +Y L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 74 FYIFDLRRRYLLDWRTRVHIIEG----------------ITQGLLYLQEYSNLTIVHRDL 117
++ R ++ +T I+E + +G+ +L ++ +HRDL
Sbjct: 116 NFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 171
Query: 118 KASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVY 177
A NILL + KI DFG+AR D G ++ PE + +Y+ + DV+
Sbjct: 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231
Query: 178 SYGVLLLQIL 187
SYG+ L ++
Sbjct: 232 SYGIFLWELF 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 45 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 104
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 105 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 162
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 163 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 221
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 222 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 269
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 270 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 299
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 51 LGICTQREEKML-IYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSN 109
L C Q E ++ + +Y+ L F++ R+R L + R + E I+ L YL E
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG- 141
Query: 110 LTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI 169
I++RDLK N+LLD E + K++D+GM + + T GT Y+ PE +R
Sbjct: 142 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSXFCGTPNYIAPEILRGED 197
Query: 170 YSMKYDVYSYGVLLLQILGGK 190
Y D ++ GVL+ +++ G+
Sbjct: 198 YGFSVDWWALGVLMFEMMAGR 218
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 16 MAVKRLSRTSH-QGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSLD 73
+AVK L ++H E +E+K+ + L H+N++ +LG CT ++I +Y L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 74 FYIFDLRRRYLLDWRTRVHIIEG----------------ITQGLLYLQEYSNLTIVHRDL 117
++ R ++ +T I+E + +G+ +L ++ +HRDL
Sbjct: 139 NFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 194
Query: 118 KASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVY 177
A NILL + KI DFG+AR D G ++ PE + +Y+ + DV+
Sbjct: 195 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 254
Query: 178 SYGVLLLQIL 187
SYG+ L ++
Sbjct: 255 SYGIFLWELF 264
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 16 MAVKRLSRTSH-QGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSLD 73
+AVK L ++H E +E+K+ + L H+N++ +LG CT ++I +Y L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 74 FYIFDLRRRYLLDWRTRVHIIEG----------------ITQGLLYLQEYSNLTIVHRDL 117
++ R ++ +T I+E + +G+ +L ++ +HRDL
Sbjct: 134 NFLRRKRDSFICS-KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 189
Query: 118 KASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVY 177
A NILL + KI DFG+AR D G ++ PE + +Y+ + DV+
Sbjct: 190 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 249
Query: 178 SYGVLLLQIL 187
SYG+ L ++
Sbjct: 250 SYGIFLWELF 259
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 121 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E + TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 48 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 107
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 108 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 165
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 166 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 224
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 225 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 272
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 273 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 302
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 2 SVAICQG--RLPNGQEMAVKRLSRTSHQGLEE--FENEVKLTARLQHVNLLPVLGICTQR 57
S CQ R +G+ + K L S E+ +EV L L+H N++ R
Sbjct: 18 SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 77
Query: 58 EEKML--IYDYMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSN--LTI 112
L + +Y L I + R LD + ++ +T L S+ T+
Sbjct: 78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV 137
Query: 113 VHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM 172
+HRDLK +N+ LD + N K+ DFG+AR DE A VGT Y+ PE + + Y+
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPEQMNRMSYNE 195
Query: 173 KYDVYSYGVLLLQI 186
K D++S G LL ++
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 140 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 194
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 195 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 102 LYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP 161
L L +L I++RDLK NILLD E + K++DFG+++ E +A + GT Y+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMA 198
Query: 162 PEYVRKGIYSMKYDVYSYGVLLLQILGG 189
PE V + +S D +SYGVL+ ++L G
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 163
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 224 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 271
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 272 D------CWHAVPSQRPTFKQLV 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 119 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ +L ++ VHRDL A N +LD + K++D
Sbjct: 181 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 235
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E ++ TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 51 LGICTQREEKML-IYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSN 109
L C Q E ++ + +Y+ L F++ R+R L + R + E I+ L YL E
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG- 126
Query: 110 LTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI 169
I++RDLK N+LLD E + K++D+GM + + T GT Y+ PE +R
Sbjct: 127 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSXFCGTPNYIAPEILRGED 182
Query: 170 YSMKYDVYSYGVLLLQILGGK 190
Y D ++ GVL+ +++ G+
Sbjct: 183 YGFSVDWWALGVLMFEMMAGR 203
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 114 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 168
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ +L ++ VHRDL A N +LD + K++D
Sbjct: 123 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E ++ TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 141 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 120 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 239 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 286
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 287 D------CWHAVPSQRPTFKQLV 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 171
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 232 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 279
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 280 D------CWHAVPSQRPTFKQLV 296
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 54 CTQREEKML-IYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTI 112
C Q E ++ + +Y+ L F++ R+R L + R + E I+ L YL E I
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG---I 131
Query: 113 VHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM 172
++RDLK N+LLD E + K++D+GM + + T GT Y+ PE +R Y
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTTSXFCGTPNYIAPEILRGEDYGF 189
Query: 173 KYDVYSYGVLLLQILGGK 190
D ++ GVL+ +++ G+
Sbjct: 190 SVDWWALGVLMFEMMAGR 207
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 117 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 167
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 228 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 275
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 276 D------CWHAVPSQRPTFKQLV 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 121 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ +L ++ VHRDL A N +LD + K++D
Sbjct: 123 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E ++ TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 239 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 286
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 287 D------CWHAVPSQRPTFKQLV 303
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 12 NGQEMAVKRL---SRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDY 66
GQ+ AVK + TS GL E+ + E + L+H +++ +L + +++++
Sbjct: 48 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107
Query: 67 MPNKSLDFYIFDLRRR---YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL 123
M L F I ++R ++ H + I + L Y + + I+HRD+K N+L
Sbjct: 108 MDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVL 162
Query: 124 LDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
L + N K+ DFG+A + A GR VGT ++ PE V++ Y DV+ G
Sbjct: 163 LASKENSAPVKLGDFGVAIQLGESGLVAG-GR-VGTPHFMAPEVVKREPYGKPVDVWGCG 220
Query: 181 VLLLQILGGKRTSC--YYGPNESL 202
V+L +L G C +YG E L
Sbjct: 221 VILFILLSG----CLPFYGTKERL 240
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 23/233 (9%)
Query: 12 NGQEMAVKRLSRTSHQGLE---EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
G ++AVK L+R + L+ + + E++ +H +++ + + + + ++ +Y+
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L YI R ++ R + + I + Y + +VHRDLK N+LLD M
Sbjct: 95 GGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHM 148
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM-KYDVYSYGVLLLQIL 187
N KI+DFG++ + E + G+ Y PE + +Y+ + D++S GV+L +L
Sbjct: 149 NAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 188 GGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQV 240
C P + E+ L+K G F + S A LM +QV
Sbjct: 206 ------CGTLPFDD----EHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 111 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 166
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 167 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 110 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 165
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 166 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ YL ++ VHRDL A N +LD + K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 135 FGMARAFTKDE---CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 134 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 190 RANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ +L ++ VHRDL A N +LD + K++D
Sbjct: 120 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E ++ TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ +L ++ VHRDL A N +LD + K++D
Sbjct: 127 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E ++ TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 112 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 167
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 168 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 109 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 164
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 165 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ +L ++ VHRDL A N +LD + K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E ++ TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 135 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 190
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 191 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 17 AVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQRE-EKMLIYDYMPNKSLDF 74
AVK L+R + G + +F E + H N+L +LGIC + E +++ YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
+I + + + + + +G+ +L ++ VHRDL A N +LD + K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 135 FGMARAFTKDECEA---NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
FG+AR E ++ TG + ++ E ++ ++ K DV+S+GVLL +++
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 134 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 132 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 188 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 134 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 135 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 190
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 191 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 132 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 188 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 132 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 188 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 170
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 231 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 278
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 279 D------CWHAVPSQRPTFKQLV 295
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 134 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGIC-------------TQRE 58
+G+ +KR+ + E+ E EVK A+L HVN++ G + R
Sbjct: 35 DGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90
Query: 59 EKMLIY---DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHR 115
+ ++ ++ +L+ +I + RR LD + + E IT+G+ Y+ + +++R
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINR 146
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
DLK SNI L KI DFG+ + D R GT Y+ PE + Y + D
Sbjct: 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTLRYMSPEQISSQDYGKEVD 203
Query: 176 VYSYGVLLLQIL 187
+Y+ G++L ++L
Sbjct: 204 LYALGLILAELL 215
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 132 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 188 RANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 134 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 116 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 171
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 172 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 137 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 192
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 193 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 131 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 186
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 187 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 2 SVAICQG--RLPNGQEMAVKRLSRTSHQGLEE--FENEVKLTARLQHVNLLPVLGICTQR 57
S CQ R +G+ + K L S E+ +EV L L+H N++ R
Sbjct: 18 SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 77
Query: 58 EEKML--IYDYMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSN--LTI 112
L + +Y L I + R LD + ++ +T L S+ T+
Sbjct: 78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV 137
Query: 113 VHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM 172
+HRDLK +N+ LD + N K+ DFG+AR D A VGT Y+ PE + + Y+
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRMSYNE 195
Query: 173 KYDVYSYGVLLLQI 186
K D++S G LL ++
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I +Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ +I+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ R L L + V + +G+ YL ++ +HRDL A
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 280 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 327
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 328 D------CWHAVPSQRPTFKQLV 344
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L LQ + IV+RDLK NILLD + + KI+DFGM + +A T GT Y+
Sbjct: 129 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--DAKTNEFCGTPDYI 186
Query: 161 PPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNES 201
PE + Y+ D +S+GVLL ++L G+ S ++G +E
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEE 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 39/276 (14%)
Query: 2 SVAICQGRLPNGQEMAVKRLSR-TSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREE 59
+V I + + +AVK L + + L + +E+++ + +H N++ +LG CTQ
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 60 KMLIYDYMPNKSLDFYI-----------FDLRR--RYLLDWRTRVHIIEGITQGLLYLQE 106
+I Y +L Y+ +D+ R + ++ V + +G+ YL
Sbjct: 116 LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-- 173
Query: 107 YSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ +HRDL A N+L+ KI+DFG+AR + T ++ PE +
Sbjct: 174 -ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 167 KGIYSMKYDVYSYGVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDS 223
+Y+ + DV+S+GVL+ +I LGG S Y G P E L + L K G M D
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGG---SPYPGIPVEEL------FKLLKEGHRM---DK 280
Query: 224 SLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL 259
+ ++ + +MR C + RPT +++
Sbjct: 281 PANCTNELYMMMRD------CWHAVPSQRPTFKQLV 310
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
TR + E I L YL I+HRDLK NILL+ +M+ +I+DFG A+ + + +A
Sbjct: 131 TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 186
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
VGT YV PE + + D+++ G ++ Q++ G
Sbjct: 187 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +G+ +L S+ +HRDL A NILL KI DFG+AR K+ G
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQI--LGG 189
++ PE + IYS K DV+SYGVLL +I LGG
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG 299
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I+ GL +L + I++RDLK N++LD E + KI+DFGM + D T GT
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGT 183
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y+ PE + Y D ++YGVLL ++L G+
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
DL LD I+ I +GL YL +HRD+KA+N+LL K++DFG
Sbjct: 108 LDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG 164
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYY 196
+A T + + N VGT ++ PE +++ Y K D++S G+ +++ G+
Sbjct: 165 VAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
Query: 197 GPNESLNLL 205
P + L L+
Sbjct: 223 HPMKVLFLI 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 63 IYDYMPNKSLDFYIFDL-RRRYLLDWRTRVHIIEG------ITQGLLYLQEYSNLTIVHR 115
+ + + F + +L RRR LL+ R + + Q +L Q ++HR
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV-GTYGYVPPEYVRKGIYSMKY 174
DLK N+ L+ ++ KI DFG+A TK E + +++ GT Y+ PE + K +S +
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 175 DVYSYGVLLLQILGGK---RTSC 194
DV+S G ++ +L GK TSC
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETSC 243
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 11 PNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
P +E AVK + T E + A L+ V++L + + + + D
Sbjct: 27 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV---SGHPNIIQLKDTYETN 83
Query: 71 SLDFYIFDLRRR-YLLDWRT-RVHIIEGITQGLL-----YLQEYSNLTIVHRDLKASNIL 123
+ F +FDL ++ L D+ T +V + E T+ ++ + L IVHRDLK NIL
Sbjct: 84 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL 143
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTG----RIVGTYGYVPPEYVRKGI------YSMK 173
LD +MN K++DFG + C+ + G + GT Y+ PE + + Y +
Sbjct: 144 LDDDMNIKLTDFGFS-------CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE 196
Query: 174 YDVYSYGVLLLQILGG 189
D++S GV++ +L G
Sbjct: 197 VDMWSTGVIMYTLLAG 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 112
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 113 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 164
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 165 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L LQ + IV+RDLK NILLD + + KI+DFGM + +A T GT Y+
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--DAKTNXFCGTPDYI 185
Query: 161 PPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNE 200
PE + Y+ D +S+GVLL ++L G+ S ++G +E
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDE 223
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 63 IYDYMPNKSLDFYIFDL-RRRYLLDWRTRVHIIEG------ITQGLLYLQEYSNLTIVHR 115
+ + + F + +L RRR LL+ R + + Q +L Q ++HR
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV-GTYGYVPPEYVRKGIYSMKY 174
DLK N+ L+ ++ KI DFG+A TK E + +++ GT Y+ PE + K +S +
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 175 DVYSYGVLLLQILGGK---RTSC 194
DV+S G ++ +L GK TSC
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETSC 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 11 PNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
P +E AVK + T E + A L+ V++L + + + + D
Sbjct: 40 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV---SGHPNIIQLKDTYETN 96
Query: 71 SLDFYIFDLRRR-YLLDWRT-RVHIIEGITQGLL-----YLQEYSNLTIVHRDLKASNIL 123
+ F +FDL ++ L D+ T +V + E T+ ++ + L IVHRDLK NIL
Sbjct: 97 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL 156
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGR----IVGTYGYVPPEYVRKGI------YSMK 173
LD +MN K++DFG + C+ + G + GT Y+ PE + + Y +
Sbjct: 157 LDDDMNIKLTDFGFS-------CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 174 YDVYSYGVLLLQILGG 189
D++S GV++ +L G
Sbjct: 210 VDMWSTGVIMYTLLAG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 11 PNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
P +E AVK + T E + A L+ V++L + + + + D
Sbjct: 40 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV---SGHPNIIQLKDTYETN 96
Query: 71 SLDFYIFDLRRR-YLLDWRT-RVHIIEGITQGLL-----YLQEYSNLTIVHRDLKASNIL 123
+ F +FDL ++ L D+ T +V + E T+ ++ + L IVHRDLK NIL
Sbjct: 97 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL 156
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTG----RIVGTYGYVPPEYVRKGI------YSMK 173
LD +MN K++DFG + C+ + G + GT Y+ PE + + Y +
Sbjct: 157 LDDDMNIKLTDFGFS-------CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 174 YDVYSYGVLLLQILGG 189
D++S GV++ +L G
Sbjct: 210 VDMWSTGVIMYTLLAG 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 10 LPNGQEM----AVKRL-SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+P+G+ + A+K L TS + +E +E + A + + +LGIC + L+
Sbjct: 39 IPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVT 97
Query: 65 DYMPNKSLDFYIFDLRRRY----LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
MP L ++ + R R LL+W + I +G+ YL+ ++ +VHRDL A
Sbjct: 98 QLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLE---DVRLVHRDLAAR 148
Query: 121 NILLDYEMNPKISDFGMARAFTKDECE--ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L+ + KI+DFG+AR DE E A+ G++ ++ E + + ++ + DV+S
Sbjct: 149 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALESILRRRFTHQSDVWS 206
Query: 179 YGVLLLQIL 187
YGV + +++
Sbjct: 207 YGVTVWELM 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 63 IYDYMPNKSLDFYIFDL-RRRYLLDWRTRVHIIEG------ITQGLLYLQEYSNLTIVHR 115
+ + + F + +L RRR LL+ R + + Q +L Q ++HR
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV-GTYGYVPPEYVRKGIYSMKY 174
DLK N+ L+ ++ KI DFG+A TK E + +++ GT Y+ PE + K +S +
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 175 DVYSYGVLLLQILGGK---RTSC 194
DV+S G ++ +L GK TSC
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSC 219
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
DL LD I+ I +GL YL +HRD+KA+N+LL K++DFG
Sbjct: 93 LDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG 149
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYY 196
+A T + + N VGT ++ PE +++ Y K D++S G+ +++ G+
Sbjct: 150 VAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Query: 197 GPNESLNLL 205
P + L L+
Sbjct: 208 HPMKVLFLI 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 132
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 133 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 181
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 182 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 40/205 (19%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICT-------QREEKMLIY 64
+G+ ++R+ + E+ E EVK A+L HVN++ G ++ +
Sbjct: 36 DGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESS 91
Query: 65 DYMPNKS----------------------LDFYIFDLRRRYLLDWRTRVHIIEGITQGLL 102
DY P S L+ +I + RR LD + + E IT+G+
Sbjct: 92 DYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQITKGVD 150
Query: 103 YLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPP 162
Y+ + ++HRDLK SNI L KI DFG+ + D R GT Y+ P
Sbjct: 151 YIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRTRSKGTLRYMSP 204
Query: 163 EYVRKGIYSMKYDVYSYGVLLLQIL 187
E + Y + D+Y+ G++L ++L
Sbjct: 205 EQISSQDYGKEVDLYALGLILAELL 229
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 132
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 133 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 181
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 182 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P + + L + +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDE 112
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDEC 146
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 113 QRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------V 161
Query: 147 EANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 111/273 (40%), Gaps = 49/273 (17%)
Query: 42 LQHVNLLP---VLGICTQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGI 97
L+H+ P L Q E K+ LI DY+ L F R R+ + ++++ E +
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL-FTHLSQRERFT-EHEVQIYVGEIV 169
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
L L+ L I++RD+K NILLD + ++DFG+++ F DE E GT
Sbjct: 170 ----LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTI 224
Query: 158 GYVPPEYVRKGI--YSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
Y+ P+ VR G + D +S GVL+ ++L G G
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG------------------ 266
Query: 216 EGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLKSETADIKTPKKP 275
+ +S A R ++ QE +A +++ L+M K PKK
Sbjct: 267 ----------EKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLM--------KDPKKR 308
Query: 276 AFSVKRDNDEISECMLEANIYSVDDATITQPVP 308
RD DEI E + I D A P P
Sbjct: 309 LGCGPRDADEIKEHLFFQKINWDDLAAKKVPAP 341
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQR 109
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 110 TATYITE-LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 67 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 123
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 124 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 172
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 173 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P + + L + +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDE 112
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDEC 146
RT +I E + L Y + ++HRD+K N+LL KI+DFG ++
Sbjct: 113 QRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 164
Query: 147 EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 102 LYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP 161
L L +L I++RDLK NILLD E + K++DFG+++ E +A + GT Y+
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 195
Query: 162 PEYVRKGIYSMKYDVYSYGVLLLQILGG 189
PE V + ++ D +S+GVL+ ++L G
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 102 LYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP 161
L L +L I++RDLK NILLD E + K++DFG+++ E +A + GT Y+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 162 PEYVRKGIYSMKYDVYSYGVLLLQILGG 189
PE V + ++ D +S+GVL+ ++L G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I GL +LQ I++RDLK N++LD E + KI+DFGM + D T GT
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGT 505
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y+ PE + Y D +++GVLL ++L G+
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVL-------GICTQREEKMLIYD 65
G+++AVK T E E+ T ++H N+L + G TQ LI D
Sbjct: 60 GEKVAVKVFFTTEEASWFR-ETEIYQTVLMRHENILGFIAADIKGTGSWTQL---YLITD 115
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQE-----YSNLTIVHRDLKAS 120
Y N SL +D + LD ++ + + GL +L I HRDLK+
Sbjct: 116 YHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSK 171
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANT--GRIVGTYGYVPPEYVRKGIYSMKY---- 174
NIL+ I+D G+A F D E + VGT Y+PPE + + + +
Sbjct: 172 NILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYI 231
Query: 175 --DVYSYGVLLLQI----LGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDS 228
D+YS+G++L ++ + G Y P L + +Y + ++ + S +
Sbjct: 232 MADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR 291
Query: 229 SSAWKLMRCM-QVALLCVQENAADRPTMLEILVMLK--SETADIK 270
S+ + +R M ++ C N A R T L + L SE+ DIK
Sbjct: 292 WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK 336
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 102 LYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP 161
L L +L I++RDLK NILLD E + K++DFG+++ E +A + GT Y+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 162 PEYVRKGIYSMKYDVYSYGVLLLQILGG 189
PE V + ++ D +S+GVL+ ++L G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG ++
Sbjct: 107 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHA 158
Query: 146 CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 159 PSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 111
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 112 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 160
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
G ++A K + + EE +NE+ + +L H NL+ + + + +L+ +Y+ L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL-LDYEMNP- 130
I D Y L + ++ I +G+ ++ + + I+H DLK NIL ++ +
Sbjct: 174 FDRIID--ESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQI 228
Query: 131 KISDFGMARAFT-KDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
KI DFG+AR + +++ + N GT ++ PE V S D++S GV+ +L G
Sbjct: 229 KIIDFGLARRYKPREKLKVN----FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
Query: 190 KRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSS 224
S + G N++ L W + E EF D S
Sbjct: 285 --LSPFLGDNDAETLNNILACRW-DLEDEEFQDIS 316
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 63 IYDYMPNKSLDFYIFDL-RRRYLLDWRTRVHIIEG------ITQGLLYLQEYSNLTIVHR 115
+ + + F + +L RRR LL+ R + + Q +L Q ++HR
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
DLK N+ L+ ++ KI DFG+A D T + GT Y+ PE + K +S + D
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVD 199
Query: 176 VYSYGVLLLQILGGK---RTSC 194
V+S G ++ +L GK TSC
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSC 221
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 63 IYDYMPNKSLDFYIFDL-RRRYLLDWRTRVHIIEG------ITQGLLYLQEYSNLTIVHR 115
+ + + F + +L RRR LL+ R + + Q +L Q ++HR
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
DLK N+ L+ ++ KI DFG+A D T + GT Y+ PE + K +S + D
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVD 203
Query: 176 VYSYGVLLLQILGGK---RTSC 194
V+S G ++ +L GK TSC
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSC 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 15 EMAVK--RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK-----MLIYDYM 67
++AVK +L +S + +EEF +E H N++ +LG+C + + M+I +M
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 68 PNKSLDFYIFDLRRRY---LLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
L Y+ R + +T + + I G+ YL SN +HRDL A N +L
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCML 180
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGT-YGYVPPEYVRKGIYSMKYDVYSYGVLL 183
+M ++DFG+++ + GRI ++ E + +Y+ K DV+++GV +
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDY-YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 239
Query: 184 LQI 186
+I
Sbjct: 240 WEI 242
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 108
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG ++
Sbjct: 109 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHA 160
Query: 146 CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 161 PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 109
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 110 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
GQ +A+K++ S L+E E+ + + +++ G + + ++ +Y S
Sbjct: 53 TGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS 110
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
+ I LR + L + I++ +GL YL + +HRD+KA NILL+ E + K
Sbjct: 111 VS-DIIRLRNKTLTEDEIAT-ILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAK 165
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
++DFG+A T + N ++GT ++ PE +++ Y+ D++S G+ +++ GK
Sbjct: 166 LADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 110 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 158
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 63 IYDYMPNKSLDFYIFDL-RRRYLLDWRTRVHIIEG------ITQGLLYLQEYSNLTIVHR 115
+ + + F + +L RRR LL+ R + + Q +L Q ++HR
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYD 175
DLK N+ L+ ++ KI DFG+A D T + GT Y+ PE + K +S + D
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVD 199
Query: 176 VYSYGVLLLQILGGK---RTSC 194
V+S G ++ +L GK TSC
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSC 221
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 107 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 155
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 156 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 10 LPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
L N +A+K + + + E+ L L+H N++ LG ++ + + +P
Sbjct: 44 LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103
Query: 70 KSLDFYIFDLRRRY--LLDWRTRVHI-IEGITQGLLYLQEYSNLTIVHRDLKASNILLD- 125
SL LR ++ L D + + I +GL YL + IVHRD+K N+L++
Sbjct: 104 GSLSAL---LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT 157
Query: 126 YEMNPKISDFGMARAFTK-DECEANTGRIVGTYGYVPPEYVRKGI--YSMKYDVYSYGVL 182
Y KISDFG ++ + C T GT Y+ PE + KG Y D++S G
Sbjct: 158 YSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCT 214
Query: 183 LLQILGGK 190
++++ GK
Sbjct: 215 IIEMATGK 222
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 107
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 108 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 156
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 157 VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 107
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 108 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 156
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 111
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 112 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 160
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 161 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 107 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 155
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 156 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I GL +LQ I++RDLK N++LD E + KI+DFGM + D T GT
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGT 184
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y+ PE + Y D +++GVLL ++L G+
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 16 MAVKRLSRTSHQ--GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
+A+K L +T + G+E + EV++ + L+H N+L + G LI +Y P ++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
+ L R + RT +I E + L Y + ++HRD+K N+LL KI
Sbjct: 100 YRELQKLSR--FDEQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSNGELKI 153
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+DFG ++ + + GT Y+PPE + ++ K D++S GVL + L G
Sbjct: 154 ADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 38/270 (14%)
Query: 12 NGQEMAVKRL-SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMP 68
G+ +AVK L + Q ++ E+ + L H +++ G C + EK L+ +Y+P
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
SL Y+ R+ + + + I +G+ YL + +HR+L A N+LLD +
Sbjct: 102 LGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDR 154
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGVLL 183
KI DFG+A+A E + V G P PE +++ + DV+S+GV L
Sbjct: 155 LVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 184 LQILGGKRTSCYYGPNESLNLLEYAYG---------LWKNGEGMEFIDSSLDDSSSAWKL 234
++L +S P + L L+ A G L + GE + D + L
Sbjct: 211 YELLTHCDSS-QSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC---PCEVYHL 266
Query: 235 MRCMQVALLCVQENAADRPTMLEILVMLKS 264
M+ C + A+ RPT ++ +LK+
Sbjct: 267 MKN------CWETEASFRPTFENLIPILKT 290
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDEC 146
+ I + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------V 156
Query: 147 EANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 157 HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 16 MAVKRLSRTSHQ--GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
+A+K L +T + G+E + EV++ + L+H N+L + G LI +Y P ++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKI 132
+ L R + RT +I E + L Y + ++HRD+K N+LL KI
Sbjct: 100 YRELQKLSR--FDEQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSNGELKI 153
Query: 133 SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+DFG ++ + + GT Y+PPE + ++ K D++S GVL + L G
Sbjct: 154 ADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 113
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 114 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 165
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 39/263 (14%)
Query: 15 EMAVKRL-SRTSHQGLEEFENEVKLTARL-QHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
++AVK L S + + L + +E+++ + +H N++ +LG CTQ +I +Y +L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 73 DFYIFDLRRRYL-------------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
Y+ L L + V + +G+ YL ++ +HRDL A
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
N+L+ + KI+DFG+AR + T ++ PE + IY+ + DV+S+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 180 GVLLLQI--LGGKRTSCYYG-PNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR 236
GVLL +I LGG S Y G P E L + L K G M D + ++ + +MR
Sbjct: 239 GVLLWEIFTLGG---SPYPGVPVEEL------FKLLKEGHRM---DKPSNCTNELYMMMR 286
Query: 237 CMQVALLCVQENAADRPTMLEIL 259
C + RPT +++
Sbjct: 287 D------CWHAVPSQRPTFKQLV 303
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Query: 93 IIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEAN 149
II+ + G+ YL +++ IVHRDLK N+LL+ + KI DFG++ F E +
Sbjct: 141 IIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKK 194
Query: 150 TGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+GT Y+ PE +RK Y K DV+S GV+L +L G
Sbjct: 195 MKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAG 233
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 10 LPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
L N +A+K + + + E+ L L+H N++ LG ++ + + +P
Sbjct: 30 LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 89
Query: 70 KSLDFYIFDLRRRY--LLDWRTRVHI-IEGITQGLLYLQEYSNLTIVHRDLKASNILLD- 125
SL LR ++ L D + + I +GL YL + IVHRD+K N+L++
Sbjct: 90 GSLSAL---LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT 143
Query: 126 YEMNPKISDFGMARAFTK-DECEANTGRIVGTYGYVPPEYVRKGI--YSMKYDVYSYGVL 182
Y KISDFG ++ + C T GT Y+ PE + KG Y D++S G
Sbjct: 144 YSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCT 200
Query: 183 LLQILGGK 190
++++ GK
Sbjct: 201 IIEMATGK 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 111
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI+DFG +
Sbjct: 112 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------- 160
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + + K D++S GVL + L GK
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 42/272 (15%)
Query: 12 NGQEMAVKRL-SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMP 68
G+ +AVK L + Q ++ E+ + L H +++ G C + EK L+ +Y+P
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYL--QEYSNLTIVHRDLKASNILLDY 126
SL Y+ R+ + + + I +G+ YL Q Y +HR+L A N+LLD
Sbjct: 102 LGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQHY-----IHRNLAARNVLLDN 152
Query: 127 EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGV 181
+ KI DFG+A+A E + V G P PE +++ + DV+S+GV
Sbjct: 153 DRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 208
Query: 182 LLLQILGGKRTSCYYGPNESLNLLEYAYG---------LWKNGEGMEFIDSSLDDSSSAW 232
L ++L +S P + L L+ A G L + GE + D +
Sbjct: 209 TLYELLTHCDSS-QSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC---PCEVY 264
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVMLKS 264
LM+ C + A+ RPT ++ +LK+
Sbjct: 265 HLMKN------CWETEASFRPTFENLIPILKT 290
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 112
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG + A
Sbjct: 113 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHA 161
Query: 149 NTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 109
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 110 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+ EV++ + L+H N+L + G LI +Y P ++ + L + + RT
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRT 113
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 114 ATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSR 165
Query: 150 TGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 109
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 110 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 52 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 108
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG + A
Sbjct: 109 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHA 157
Query: 149 NTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 158 PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD-WR 88
+ EV++ + L+H N+L + G LI +Y P L +L++ D R
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQR 112
Query: 89 TRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
T +I E + L Y + ++HRD+K N+LL KI+DFG + A
Sbjct: 113 TATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHA 161
Query: 149 NTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 PSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
A K + S + LE++ E+ + A H N++ +L ++ ++ ++D +
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
+L R T I Q L L + I+HRDLKA NIL + + K++DFG
Sbjct: 99 LELERPL-----TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG 153
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGVLLLQI 186
++ T+ + +GT ++ PE V + Y K DV+S G+ L+++
Sbjct: 154 VSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
+ EV++ + L+H N+L + G LI +Y P ++ + L + + RT
Sbjct: 50 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRT 107
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN 149
+I E + L Y + ++HRD+K N+LL KI+DFG ++ +
Sbjct: 108 ATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSR 159
Query: 150 TGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 160 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 25/130 (19%)
Query: 80 RRRYLLDWRTR------------VHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYE 127
R+ L DW R +HI I + + +L ++HRDLK SNI +
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMD 200
Query: 128 MNPKISDFGMARAFTKDECE----------ANTGRIVGTYGYVPPEYVRKGIYSMKYDVY 177
K+ DFG+ A +DE E A VGT Y+ PE + YS K D++
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIF 260
Query: 178 SYGVLLLQIL 187
S G++L ++L
Sbjct: 261 SLGLILFELL 270
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKD-ECEANTGRIVGTYGYVPPEYVRKGIY 170
I+HRD+K +NIL+ K+ DFG+ARA T ++GT Y+ PE R
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 171 SMKYDVYSYGVLLLQILGGK 190
+ DVYS G +L ++L G+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G+++AVK++ Q E NEV + H N++ + +E ++ +++ +
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + R ++ + + + L YL N ++HRD+K+ +ILL + K
Sbjct: 129 LTDIVTHTR----MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIK 181
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+SDFG +K+ + +VGT ++ PE + + Y + D++S G+++++++ G+
Sbjct: 182 LSDFGFCAQVSKEVPKRKX--LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 163
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 164 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 220
Query: 186 ILGGK 190
+L +
Sbjct: 221 MLSNR 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 22 SRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLR 80
S+ +G+E + E+++ A L H N+L + R LI +Y P L +L+
Sbjct: 59 SQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL---YKELQ 115
Query: 81 RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARA 140
+ D + I+E + L+Y ++HRD+K N+LL + KI+DFG
Sbjct: 116 KSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG---- 168
Query: 141 FTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
++ + GT Y+PPE + +++ K D++ GVL ++L G
Sbjct: 169 WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDL 163
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 164 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 220
Query: 186 ILGGK 190
+L +
Sbjct: 221 MLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 165
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 166 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 222
Query: 186 ILGGK 190
+L +
Sbjct: 223 MLSNR 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 167
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 168 KICDFGLARVADPD--HDHTGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 224
Query: 186 ILGGK 190
+L +
Sbjct: 225 MLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 112 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 168
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 169 KICDFGLARVADPD--HDHTGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 225
Query: 186 ILGGK 190
+L +
Sbjct: 226 MLSNR 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 112 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 168
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 169 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 225
Query: 186 ILGGK 190
+L +
Sbjct: 226 MLSNR 230
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 62 LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
L+ M L F+I+ + + + R + E I GL ++ IV+RDLK N
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGL---EDLHRERIVYRDLKPEN 316
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
ILLD + +ISD G+A E + GR VGT GY+ PE V+ Y+ D ++ G
Sbjct: 317 ILLDDHGHIRISDLGLAVHVP--EGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 182 LLLQILGGK 190
LL +++ G+
Sbjct: 374 LLYEMIAGQ 382
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 53 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 112
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 113 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 169
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 170 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 226
Query: 186 ILGGK 190
+L +
Sbjct: 227 MLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 44 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 103
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 104 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 160
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 161 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 217
Query: 186 ILGGK 190
+L +
Sbjct: 218 MLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 167
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 168 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 224
Query: 186 ILGGK 190
+L +
Sbjct: 225 MLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 105 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 161
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 162 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 218
Query: 186 ILGGK 190
+L +
Sbjct: 219 MLSNR 223
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+C+ + +++A+K++ S + + F E++ +R+ H N++ + G C L+
Sbjct: 25 VCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 79
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGI---TQGLLYLQEYSNLTIVHRDLKASN 121
+Y SL + L + T H + +QG+ YL ++HRDLK N
Sbjct: 80 EYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 122 ILLDYEMNP-KISDFGMARAFTKDECEANTGRI--VGTYGYVPPEYVRKGIYSMKYDVYS 178
+LL KI DFG A C+ T G+ ++ PE YS K DV+S
Sbjct: 137 LLLVAGGTVLKICDFGTA-------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 189
Query: 179 YGVLLLQIL 187
+G++L +++
Sbjct: 190 WGIILWEVI 198
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 55 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 114
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 115 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 171
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 172 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 228
Query: 186 ILGGK 190
+L +
Sbjct: 229 MLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 163
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 164 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 220
Query: 186 ILGGK 190
+L +
Sbjct: 221 MLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDL 167
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 168 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 224
Query: 186 ILGGK 190
+L +
Sbjct: 225 MLSNR 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 108
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI++FG +
Sbjct: 109 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS------- 157
Query: 146 CEANTGR---IVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
A + R + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 158 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 67 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 126
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 127 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 183
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 184 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 240
Query: 186 ILGGK 190
+L +
Sbjct: 241 MLSNR 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 105 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 161
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 162 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 218
Query: 186 ILGGK 190
+L +
Sbjct: 219 MLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 51 NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDL 167
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 168 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 224
Query: 186 ILGGK 190
+L +
Sbjct: 225 MLSNR 229
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 5 ICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY 64
+C+ + +++A+K++ S + + F E++ +R+ H N++ + G C L+
Sbjct: 24 VCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGI---TQGLLYLQEYSNLTIVHRDLKASN 121
+Y SL + L + T H + +QG+ YL ++HRDLK N
Sbjct: 79 EYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 122 ILLDYEMNP-KISDFGMARAFTKDECEANTGRI--VGTYGYVPPEYVRKGIYSMKYDVYS 178
+LL KI DFG A C+ T G+ ++ PE YS K DV+S
Sbjct: 136 LLLVAGGTVLKICDFGTA-------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188
Query: 179 YGVLLLQIL 187
+G++L +++
Sbjct: 189 WGIILWEVI 197
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 62 LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
L+ M L F+I+ + + + R + E I GL ++ IV+RDLK N
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGL---EDLHRERIVYRDLKPEN 316
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
ILLD + +ISD G+A E + GR VGT GY+ PE V+ Y+ D ++ G
Sbjct: 317 ILLDDHGHIRISDLGLAVHVP--EGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 182 LLLQILGGK 190
LL +++ G+
Sbjct: 374 LLYEMIAGQ 382
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G A K + S + LE++ E+++ A H ++ +LG + ++ ++ P +
Sbjct: 35 TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 94
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
+D + +L R T I Q L L + I+HRDLKA N+L+ E + +
Sbjct: 95 VDAIMLELDRGL-----TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIR 149
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGVLLLQI 186
++DFG++ K + ++ +GT ++ PE V + Y K D++S G+ L+++
Sbjct: 150 LADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKD-ECEANTGRIVGTYGYVPPEYVRKGIY 170
I+HRD+K +NI++ K+ DFG+ARA T ++GT Y+ PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 171 SMKYDVYSYGVLLLQILGGK 190
+ DVYS G +L ++L G+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDL 163
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 164 KIXDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 220
Query: 186 ILGGK 190
+L +
Sbjct: 221 MLSNR 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKD-ECEANTGRIVGTYGYVPPEYVRKGIY 170
I+HRD+K +NI++ K+ DFG+ARA T ++GT Y+ PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 171 SMKYDVYSYGVLLLQILGGK 190
+ DVYS G +L ++L G+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKD-ECEANTGRIVGTYGYVPPEYVRKGIY 170
I+HRD+K +NI++ K+ DFG+ARA T ++GT Y+ PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 171 SMKYDVYSYGVLLLQILGGK 190
+ DVYS G +L ++L G+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 96 GITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVG 155
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VG
Sbjct: 174 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVG 227
Query: 156 TYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNG 215
T Y+ PE ++ YS++ D++S G+ L+++ G+ Y P LE +G G
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPIPPPDAKELELMFGCQVEG 283
Query: 216 EGME 219
+ E
Sbjct: 284 DAAE 287
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDL 163
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 164 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 220
Query: 186 ILGGK 190
+L +
Sbjct: 221 MLSNR 225
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKD-ECEANTGRIVGTYGYVPPEYVRKGIY 170
I+HRD+K +NI++ K+ DFG+ARA T ++GT Y+ PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 171 SMKYDVYSYGVLLLQILGGK 190
+ DVYS G +L ++L G+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 3 VAICQGRLPNGQEMAVKRLSR-----TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQR 57
V +C+ +L G E A+K + + TS+ G +EV + +L H N++ + +
Sbjct: 20 VLLCKDKL-TGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLDHPNIMKLYEFFEDK 76
Query: 58 EEKMLIYD-YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
L+ + Y + D I LR+++ I++ + G YL +++ IVHRD
Sbjct: 77 RNYYLVMEVYRGGELFDEII--LRQKF--SEVDAAVIMKQVLSGTTYLHKHN---IVHRD 129
Query: 117 LKASNILLDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK 173
LK N+LL+ + KI DFG++ F E +GT Y+ PE +RK Y K
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRKK-YDEK 185
Query: 174 YDVYSYGVLLLQILGG 189
DV+S GV+L +L G
Sbjct: 186 CDVWSCGVILYILLCG 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G A K + S + LE++ E+++ A H ++ +LG + ++ ++ P +
Sbjct: 43 TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
+D + +L R T I Q L L + I+HRDLKA N+L+ E + +
Sbjct: 103 VDAIMLELDRGL-----TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIR 157
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGVLLLQI 186
++DFG++ K + ++ +GT ++ PE V + Y K D++S G+ L+++
Sbjct: 158 LADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 12 NGQEMAVKRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
+G+++A+K+LSR + + E+ L +QH N++ +L + T YD+
Sbjct: 48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 67 MPNKSLDFYIFDLRRRYLLDWRTRV--HIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
MP F DL++ L + +++ + +GL Y+ + +VHRDLK N+ +
Sbjct: 108 MP-----FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAV 159
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSYGVLL 183
+ + KI DFG+AR +A V T Y PE + + Y+ D++S G ++
Sbjct: 160 NEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 214
Query: 184 LQILGGK 190
++L GK
Sbjct: 215 AEMLTGK 221
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VGT
Sbjct: 140 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVGT 193
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y+ PE ++ YS++ D++S G+ L+++ G+ Y P LE +G G+
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPIPPPDAKELELMFGCQVEGD 249
Query: 217 GME 219
E
Sbjct: 250 AAE 252
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 12 NGQEMAVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREE-KMLIYDYMPN 69
N + A+K LSR T Q +E F E L L H N+L ++GI E ++ YM +
Sbjct: 48 NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCH 107
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L +I +R + + + + +G+ YL E VHRDL A N +LD
Sbjct: 108 GDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFT 162
Query: 130 PKISDFGMARAFTKDEC----EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
K++DFG+AR E + R+ + + E ++ ++ K DV+S+GVLL +
Sbjct: 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTAL--ESLQTYRFTTKSDVWSFGVLLWE 220
Query: 186 IL 187
+L
Sbjct: 221 LL 222
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
A K + S + LE++ E+ + A H N++ +L ++ ++ ++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
+L R +++ ++ Q L L + I+HRDLKA NIL + + K++DFG
Sbjct: 126 LELERPLT---ESQIQVV--CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGVLLLQI 186
++ T+ ++ +GT ++ PE V + Y K DV+S G+ L+++
Sbjct: 181 VSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
A K + S + LE++ E+ + A H N++ +L ++ ++ ++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
+L R +++ ++ Q L L + I+HRDLKA NIL + + K++DFG
Sbjct: 126 LELERPLT---ESQIQVV--CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGVLLLQI 186
++ T+ ++ +GT ++ PE V + Y K DV+S G+ L+++
Sbjct: 181 VSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 21/187 (11%)
Query: 12 NGQEMAVKRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
+G+++A+K+LSR + + E+ L +QH N++ +L + T YD+
Sbjct: 66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 67 MPNKSLDFYIFDLRRRYLLDWRTRV--HIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
MP F DL++ +++ +++ + +GL Y+ + +VHRDLK N+ +
Sbjct: 126 MP-----FMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAV 177
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSYGVLL 183
+ + KI DFG+AR +A V T Y PE + + Y+ D++S G ++
Sbjct: 178 NEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232
Query: 184 LQILGGK 190
++L GK
Sbjct: 233 AEMLTGK 239
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 67 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH 126
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 127 LMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDL 183
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 184 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 240
Query: 186 ILGGK 190
+L +
Sbjct: 241 MLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 111 LMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 167
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 168 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 224
Query: 186 ILGGK 190
+L +
Sbjct: 225 MLSNR 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKD-ECEANTGRIVGTYGYVPPEYVRKGIY 170
I+HRD+K +NI++ K+ DFG+ARA T ++GT Y+ PE R
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 171 SMKYDVYSYGVLLLQILGGK 190
+ DVYS G +L ++L G+
Sbjct: 214 DARSDVYSLGCVLYEVLTGE 233
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+ L L H N++ ++ + L++++M K L + D + L D + ++++
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKIYLY 126
Query: 95 EGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV 154
+ + +G+ + ++ I+HRDLK N+L++ + K++DFG+ARAF + T +V
Sbjct: 127 Q-LLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV 181
Query: 155 GTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ P + YS D++S G + +++ GK
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+G+ +AVK++ Q E NEV + QH N++ + +E ++ +++ +
Sbjct: 44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + R ++ + + Q L L ++HRD+K+ +ILL ++ K
Sbjct: 104 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 156
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+SDFG +K+ +VGT ++ PE + + Y + D++S G+++++++ G+
Sbjct: 157 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+ L L H N++ ++ + L++++M K L + D + L D + ++++
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKIYLY 126
Query: 95 EGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV 154
+ + +G+ + ++ I+HRDLK N+L++ + K++DFG+ARAF + T +V
Sbjct: 127 Q-LLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV 181
Query: 155 GTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ P + YS D++S G + +++ GK
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 51 LGICTQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSN 109
L Q +K+ + DY+ L +++ R R L+ R R + E I L YL +
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAE-IASALGYLH---S 157
Query: 110 LTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI 169
L IV+RDLK NILLD + + ++DFG+ + E + T GT Y+ PE + K
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 170 YSMKYDVYSYGVLLLQILGG 189
Y D + G +L ++L G
Sbjct: 216 YDRTVDWWCLGAVLYEMLYG 235
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 28 GLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
G+E + EV++ + L+H N+L + G LI +Y P L +L++ D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 87 -WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
RT +I E + L Y + ++HRD+K N+LL KI++FG ++
Sbjct: 110 EQRTATYITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHA 161
Query: 146 CEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+ + GT Y+PPE + ++ K D++S GVL + L GK
Sbjct: 162 PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 42/272 (15%)
Query: 12 NGQEMAVKRL-SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMP 68
G+ +AVK L + Q ++ E+ + L H +++ G C L+ +Y+P
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYL--QEYSNLTIVHRDLKASNILLDY 126
SL Y+ R+ + + + I +G+ YL Q Y +HRDL A N+LLD
Sbjct: 119 LGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQHY-----IHRDLAARNVLLDN 169
Query: 127 EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGV 181
+ KI DFG+A+A E + V G P PE +++ + DV+S+GV
Sbjct: 170 DRLVKIGDFGLAKAVP----EGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 225
Query: 182 LLLQILGGKRTSCYYGPNESLNLLEYAYG---------LWKNGEGMEFIDSSLDDSSSAW 232
L ++L +S P + L L+ A G L + GE + D + +
Sbjct: 226 TLYELLTHCDSS-QSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC---PAEVY 281
Query: 233 KLMRCMQVALLCVQENAADRPTMLEILVMLKS 264
LM+ C + A+ RPT ++ +LK+
Sbjct: 282 HLMKN------CWETEASFRPTFENLIPILKT 307
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +G+ +L ++ +HRDL A NILL + KI DFG+AR KD G
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
++ PE + +Y+++ DV+S+GVLL +I S P + + E K G
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF-----SLGASPYPGVKIDEEFCRRLKEGT 318
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
M D + + Q L C + RPT E++ L
Sbjct: 319 RMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 3 VAICQGRLPNGQEMAVKRLSR-----TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQR 57
V +C+ +L G E A+K + + TS+ G +EV + +L H N++ + +
Sbjct: 37 VLLCKDKL-TGAERAIKIIKKSSVTTTSNSG--ALLDEVAVLKQLDHPNIMKLYEFFEDK 93
Query: 58 EEKMLIYD-YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
L+ + Y + D I LR+++ I++ + G YL +++ IVHRD
Sbjct: 94 RNYYLVMEVYRGGELFDEII--LRQKF--SEVDAAVIMKQVLSGTTYLHKHN---IVHRD 146
Query: 117 LKASNILLDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK 173
LK N+LL+ + KI DFG++ F E +GT Y+ PE +RK Y K
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRKK-YDEK 202
Query: 174 YDVYSYGVLLLQILGG 189
DV+S GV+L +L G
Sbjct: 203 CDVWSCGVILYILLCG 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+G+ +AVK++ Q E NEV + QH N++ + +E ++ +++ +
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + R ++ + + Q L L ++HRD+K+ +ILL ++ K
Sbjct: 113 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 165
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+SDFG +K+ +VGT ++ PE + + Y + D++S G+++++++ G+
Sbjct: 166 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +G+ +L ++ +HRDL A NILL + KI DFG+AR KD G
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
++ PE + +Y+++ DV+S+GVLL +I S P + + E K G
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF-----SLGASPYPGVKIDEEFCRRLKEGT 320
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
M D + + Q L C + RPT E++ L
Sbjct: 321 RMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+G+ +AVK++ Q E NEV + QH N++ + +E ++ +++ +
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 107
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + R ++ + + Q L L ++HRD+K+ +ILL ++ K
Sbjct: 108 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 160
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+SDFG +K+ +VGT ++ PE + + Y + D++S G+++++++ G+
Sbjct: 161 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+G+ +AVK++ Q E NEV + QH N++ + +E ++ +++ +
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + R ++ + + Q L L ++HRD+K+ +ILL ++ K
Sbjct: 115 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 167
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+SDFG +K+ +VGT ++ PE + + Y + D++S G+++++++ G+
Sbjct: 168 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 13 GQEMAVKRLSRTSHQGLEE-FENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G+ AVK + + + +G E ENE+ + +++H N++ + I L+ +
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 72 LDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL---DYE 127
L FD + + + +I + + YL + IVHRDLK N+L D E
Sbjct: 107 L----FDRIVEKGFYTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEE 159
Query: 128 MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
ISDFG+++ K + + GT GYV PE + + YS D +S GV+ +L
Sbjct: 160 SKIMISDFGLSKMEGKGDVMSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 188 GGKRTSCYYGPNES 201
G +Y N+S
Sbjct: 217 CG--YPPFYDENDS 228
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +G+ +L ++ +HRDL A NILL + KI DFG+AR KD G
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
++ PE + +Y+++ DV+S+GVLL +I S P + + E K G
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF-----SLGASPYPGVKIDEEFCRRLKEGT 313
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
M D + + Q L C + RPT E++ L
Sbjct: 314 RMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VGT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVGT 166
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y+ PE ++ YS++ D++S G+ L+++ G+ Y P LE +G G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPIPPPDAKELELMFGCQVEGD 222
Query: 217 GME 219
E
Sbjct: 223 AAE 225
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +G+ +L ++ +HRDL A NILL + KI DFG+AR KD G
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
++ PE + +Y+++ DV+S+GVLL +I S P + + E K G
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF-----SLGASPYPGVKIDEEFCRRLKEGT 311
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVML 262
M D + + Q L C + RPT E++ L
Sbjct: 312 RMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 12 NGQEMAVKRLSRTSHQ-GLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
+G E +K +++ Q +E+ E E+++ L H N++ + + ++ +
Sbjct: 46 SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG 105
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L I + R + ++ E + Q + L + + +VH+DLK NIL + +P
Sbjct: 106 ELLERIVSAQARG--KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ-DTSP 162
Query: 131 ----KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
KI DFG+A F DE N GT Y+ PE ++ + + K D++S GV++ +
Sbjct: 163 HSPIKIIDFGLAELFKSDEHSTNAA---GTALYMAPEVFKRDV-TFKCDIWSAGVVMYFL 218
Query: 187 LGG 189
L G
Sbjct: 219 LTG 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A++++S HQ + E+K+ R +H N++ + I + + Y+
Sbjct: 51 NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 167
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 168 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 224
Query: 186 ILGGK 190
+L +
Sbjct: 225 MLSNR 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VGT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVGT 166
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y+ PE ++ YS++ D++S G+ L+++ G+ Y P LE +G G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPIPPPDAKELELMFGCQVEGD 222
Query: 217 GME 219
E
Sbjct: 223 AAE 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+KL L H N++ +L + L++D+M L+ I D L + +++
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKD-NSLVLTPSHIKAYML 119
Query: 95 EGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV 154
+ QGL YL ++ I+HRDLK +N+LLD K++DFG+A++F A ++V
Sbjct: 120 MTL-QGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV 174
Query: 155 GTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+ P +Y + D+++ G +L ++L
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VGT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVGT 166
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y+ PE ++ YS++ D++S G+ L+++ G+ Y P LE +G G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPIPPPDAKELELMFGCQVEGD 222
Query: 217 GME 219
E
Sbjct: 223 AAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VGT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVGT 166
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y+ PE ++ YS++ D++S G+ L+++ G+ Y P LE +G G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPIPPPDAKELELMFGCQVEGD 222
Query: 217 GME 219
E
Sbjct: 223 AAE 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 16 MAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+A+K +++ + +G E ENE+ + +++H N++ + I LI + L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 75 YIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL---LDYEMNP 130
FD + + R +I + + YL +L IVHRDLK N+L LD +
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
ISDFG+++ ++ + GT GYV PE + + YS D +S GV+ +L G
Sbjct: 159 MISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
A K + S + LE++ E+ + A H N++ +L ++ ++ ++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFG 136
+L R +++ ++ Q L L + I+HRDLKA NIL + + K++DFG
Sbjct: 126 LELERPLT---ESQIQVV--CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 137 MARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGVLLLQI 186
++ T+ + +GT ++ PE V + Y K DV+S G+ L+++
Sbjct: 181 VSAKNTRXIQRRDX--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 16 MAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+A+K +++ + +G E ENE+ + +++H N++ + I LI + L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 75 YIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL---LDYEMNP 130
FD + + R +I + + YL +L IVHRDLK N+L LD +
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
ISDFG+++ ++ + GT GYV PE + + YS D +S GV+ +L G
Sbjct: 159 MISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+G+ +AVK++ Q E NEV + QH N++ + +E ++ +++ +
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + R ++ + + Q L L ++HRD+K+ +ILL ++ K
Sbjct: 158 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 210
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+SDFG +K+ +VGT ++ PE + + Y + D++S G+++++++ G+
Sbjct: 211 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 16 MAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+A+K +++ + +G E ENE+ + +++H N++ + I LI + L
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 75 YIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL---LDYEMNP 130
FD + + R +I + + YL +L IVHRDLK N+L LD +
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
ISDFG+++ ++ + GT GYV PE + + YS D +S GV+ +L G
Sbjct: 159 MISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 16 MAVKRLSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+A+K +++ + +G E ENE+ + +++H N++ + I LI + L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 75 YIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL---LDYEMNP 130
FD + + R +I + + YL +L IVHRDLK N+L LD +
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
ISDFG+++ ++ + GT GYV PE + + YS D +S GV+ +L G
Sbjct: 159 MISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRRYLLDWRTRVHI 93
E+KL +L+H NL+ +L +C +++ L+++++ + L D +F Y + + I
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 94 IEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRI 153
I GI G + + I+HRD+K NIL+ K+ DFG AR A G +
Sbjct: 134 INGI--GFCH-----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL------AAPGEV 180
Query: 154 ----VGTYGYVPPEYVRKGI-YSMKYDVYSYGVLLLQILGGK 190
V T Y PE + + Y DV++ G L+ ++ G+
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 14 QEMAVKRLSRTSHQGLE---EFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
Q++A+K +SR + + E E+ L+H +++ + + T + +++ +Y +
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGE 94
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
D+ + ++R D R + I + Y + IVHRDLK N+LLD +N
Sbjct: 95 LFDYIV--EKKRMTEDEGRR--FFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNV 147
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYS-MKYDVYSYGVLLLQILGG 189
KI+DFG++ T + G+ Y PE + +Y+ + DV+S G++L +L G
Sbjct: 148 KIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
Query: 190 K 190
+
Sbjct: 205 R 205
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 100
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 157
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 158 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 100
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 157
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 158 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+G+ +AVK++ Q E NEV + QH N++ + +E ++ +++ +
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK 131
L + R ++ + + Q L L ++HRD+K+ +ILL ++ K
Sbjct: 235 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 287
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
+SDFG +K+ +VGT ++ PE + + Y + D++S G+++++++ G+
Sbjct: 288 LSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 12 NGQEMAVKRLSRTSHQGLEE-FENEVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMP 68
G+ +AVK L L ++ E+++ L H +++ G C + EK L+ +Y+P
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYL--QEYSNLTIVHRDLKASNILLDY 126
SL Y+ R+ + + + I +G+ YL Q Y +HR L A N+LLD
Sbjct: 97 LGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDN 147
Query: 127 EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGV 181
+ KI DFG+A+A E + V G P PE +++ + DV+S+GV
Sbjct: 148 DRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 203
Query: 182 LLLQIL 187
L ++L
Sbjct: 204 TLYELL 209
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 12 NGQEMAVKRLSRTSHQGLEE-FENEVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMP 68
G+ +AVK L L ++ E+++ L H +++ G C + EK L+ +Y+P
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYL--QEYSNLTIVHRDLKASNILLDY 126
SL Y+ R+ + + + I +G+ YL Q Y +HR L A N+LLD
Sbjct: 96 LGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDN 146
Query: 127 EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVP-----PEYVRKGIYSMKYDVYSYGV 181
+ KI DFG+A+A E + V G P PE +++ + DV+S+GV
Sbjct: 147 DRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 202
Query: 182 LLLQIL 187
L ++L
Sbjct: 203 TLYELL 208
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR-RYLLDWRTRVHI 93
E+ L +L H N++ + E ++ + L I ++ + L+ RT +
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERT---V 138
Query: 94 IEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRI 153
+ Q L+ + ++HRD+K +N+ + K+ D G+ R F+ A++ +
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--L 196
Query: 154 VGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWK 213
VGT Y+ PE + + Y+ K D++S G LL ++ + S +YG + +NL Y L K
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYG--DKMNL----YSLCK 248
Query: 214 NGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRP 253
E ++ D S + Q+ +C+ + RP
Sbjct: 249 KIEQCDYPPLPSDHYSEELR-----QLVNMCINPDPEKRP 283
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 12 NGQEMAVKRL--SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
+G++ +K + SR S + EE EV + A ++H N++ + ++ DY
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
L F + ++ L I++ Q L L+ + I+HRD+K+ NI L +
Sbjct: 108 GDL-FKRINAQKGVLFQ---EDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 163
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQI 186
++ DFG+AR A +GT Y+ PE Y+ K D+++ G +L ++
Sbjct: 164 VQLGDFGIARVLNSTVELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 13 GQEMAVKRLSRTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G +A+K + S +G E+ L L+H N++ + + + L++++M N
Sbjct: 30 GVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-- 87
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEGIT------------QGLLYLQEYSNLTIVHRDLKA 119
DL++ +D RT + G+ QGL + E I+HRDLK
Sbjct: 88 ------DLKK--YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKP 136
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANT--GRIVGTYGYVPPEYVRKGIYSMKYDVY 177
N+L++ K+ DFG+ARAF NT +V + P + YS D++
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFG---IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIW 193
Query: 178 SYGVLLLQILGGK 190
S G +L +++ GK
Sbjct: 194 SCGCILAEMITGK 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQ---HVNLLPVLGIC----T 55
VA+ R+PNG+E R EV L RL+ H N++ ++ +C T
Sbjct: 32 VALKSVRVPNGEEGLPISTVR-----------EVALLRRLEAFEHPNVVRLMDVCATSRT 80
Query: 56 QREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVH 114
RE K+ L+++++ ++ L Y+ D L T ++ +GL +L ++N IVH
Sbjct: 81 DREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFL--HAN-CIVH 135
Query: 115 RDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY 174
RDLK NIL+ K++DFG+AR ++ A +V T Y PE + + Y+
Sbjct: 136 RDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---VVVTLWYRAPEVLLQSTYATPV 192
Query: 175 DVYSYGVLLLQILGGKRTSCYYGPNESLNL 204
D++S G + ++ +R + G +E+ L
Sbjct: 193 DMWSVGCIFAEMF--RRKPLFCGNSEADQL 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 27 QGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
+ +++F EV L H NL+ + G+ KM + + P SL + + +LL
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG 121
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK--D 144
+R + + +G+ YL+ +HRDL A N+LL KI DFG+ RA + D
Sbjct: 122 TLSRYAV--QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 145 ECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG--PNESL 202
R V + + PE ++ +S D + +GV L ++ YG P L
Sbjct: 177 HXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGL 228
Query: 203 NLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-VM 261
N + + + K GE + + D V + C DRPT + + +
Sbjct: 229 NGSQILHKIDKEGERLPRPEDCPQD---------IYNVMVQCWAHKPEDRPTFVALRDFL 279
Query: 262 LKSETADIKT 271
L+++ D++
Sbjct: 280 LEAQPTDMRA 289
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR +++S +G+ E+ E EV + +QH N++ + + + + +LI + + L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGEL---- 101
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK---- 131
FD L + L ++ I G+ YL +L I H DLK NI+L PK
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I DFG+A K + I GT +V PE V ++ D++S GV+ +L G
Sbjct: 159 IIDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ +H N++ + I + + Y+
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDL 165
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 166 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 222
Query: 186 ILGGK 190
+L +
Sbjct: 223 MLSNR 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 27 QGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
+ +++F EV L H NL+ + G+ KM + + P SL + + +LL
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG 115
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK--D 144
+R + + +G+ YL+ +HRDL A N+LL KI DFG+ RA + D
Sbjct: 116 TLSRYAV--QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 145 ECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG--PNESL 202
R V + + PE ++ +S D + +GV L ++ YG P L
Sbjct: 171 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGL 222
Query: 203 NLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-VM 261
N + + + K GE + + D V + C DRPT + + +
Sbjct: 223 NGSQILHKIDKEGERLPRPEDCPQD---------IYNVMVQCWAHKPEDRPTFVALRDFL 273
Query: 262 LKSETADIKT 271
L+++ D++
Sbjct: 274 LEAQPTDMRA 283
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR SR S +G+ EE E EV + ++ H N++ + + R + +LI + + L
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL---- 102
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP----K 131
FD L ++ L I+ I G+ YL I H DLK NI+L + P K
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+ DFG+A +D E I GT +V PE V ++ D++S GV+ +L G
Sbjct: 160 LIDFGLAHEI-EDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 12 NGQEMAVKRL---SRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDY 66
GQ+ AVK + TS GL E+ + E + L+H +++ +L + +++++
Sbjct: 50 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 109
Query: 67 MPNKSLDFYIFDLRRR---YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL 123
M L F I ++R ++ H + I + L Y + + I+HRD+K +L
Sbjct: 110 MDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVL 164
Query: 124 LDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
L + N K+ FG+A + A GR VGT ++ PE V++ Y DV+ G
Sbjct: 165 LASKENSAPVKLGGFGVAIQLGESGLVAG-GR-VGTPHFMAPEVVKREPYGKPVDVWGCG 222
Query: 181 VLLLQILGGKRTSC--YYGPNESL 202
V+L +L G C +YG E L
Sbjct: 223 VILFILLSG----CLPFYGTKERL 242
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML 62
V + + RL G+ A+K + ++ ENE+ + +++H N++ + I L
Sbjct: 25 VFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83
Query: 63 IYDYMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
+ + L FD + R + + +I+ + + YL E IVHRDLK N
Sbjct: 84 VMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPEN 136
Query: 122 IL-LDYEMNPKI--SDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
+L L E N KI +DFG+ +K E GT GYV PE + + YS D +S
Sbjct: 137 LLYLTPEENSKIMITDFGL----SKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWS 192
Query: 179 YGVLLLQILGG 189
GV+ +L G
Sbjct: 193 IGVITYILLCG 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 27 QGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
+ +++F EV L H NL+ + G+ KM + + P SL + + +LL
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG 121
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK--D 144
+R + + +G+ YL+ +HRDL A N+LL KI DFG+ RA + D
Sbjct: 122 TLSRYAV--QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 145 ECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG--PNESL 202
R V + + PE ++ +S D + +GV L ++ YG P L
Sbjct: 177 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGL 228
Query: 203 NLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-VM 261
N + + + K GE + + D V + C DRPT + + +
Sbjct: 229 NGSQILHKIDKEGERLPRPEDCPQD---------IYNVMVQCWAHKPEDRPTFVALRDFL 279
Query: 262 LKSETADIKT 271
L+++ D++
Sbjct: 280 LEAQPTDMRA 289
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 12 NGQEMAVKRL---SRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDY 66
GQ+ AVK + TS GL E+ + E + L+H +++ +L + +++++
Sbjct: 48 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107
Query: 67 MPNKSLDFYIFDLRRR---YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL 123
M L F I ++R ++ H + I + L Y + + I+HRD+K +L
Sbjct: 108 MDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVL 162
Query: 124 LDYEMNP---KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
L + N K+ FG+A + A GR VGT ++ PE V++ Y DV+ G
Sbjct: 163 LASKENSAPVKLGGFGVAIQLGESGLVAG-GR-VGTPHFMAPEVVKREPYGKPVDVWGCG 220
Query: 181 VLLLQILGGKRTSC--YYGPNESL 202
V+L +L G C +YG E L
Sbjct: 221 VILFILLSG----CLPFYGTKERL 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 12 NGQEMAVKRLSRTSHQGL-EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
N +A+K++S HQ + E+K+ +H N++ + I + + Y+
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
++ ++ L + L + + I +GL Y+ + ++HRDLK SN+LL+ +
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDL 165
Query: 131 KISDFGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQ 185
KI DFG+AR D +TG + V T Y PE + KG Y+ D++S G +L +
Sbjct: 166 KICDFGLARVADPD--HDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAE 222
Query: 186 ILGGK 190
+L +
Sbjct: 223 MLSNR 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR SR S +G+ EE E EV + ++ H N++ + + R + +LI + + L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL---- 102
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP----K 131
FD L ++ L I+ I G+ YL I H DLK NI+L + P K
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+ DFG+A +D E I GT +V PE V ++ D++S GV+ +L G
Sbjct: 160 LIDFGLAHEI-EDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQ---HVNLLPVLGIC----T 55
VA+ R+PNG+E R EV L RL+ H N++ ++ +C T
Sbjct: 32 VALKSVRVPNGEEGLPISTVR-----------EVALLRRLEAFEHPNVVRLMDVCATSRT 80
Query: 56 QREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVH 114
RE K+ L+++++ ++ L Y+ D L T ++ +GL +L ++N IVH
Sbjct: 81 DREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFL--HAN-CIVH 135
Query: 115 RDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY 174
RDLK NIL+ K++DFG+AR ++ + +V T Y PE + + Y+
Sbjct: 136 RDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVVTLWYRAPEVLLQSTYATPV 192
Query: 175 DVYSYGVLLLQILGGKRTSCYYGPNESLNL 204
D++S G + ++ +R + G +E+ L
Sbjct: 193 DMWSVGCIFAEMF--RRKPLFCGNSEADQL 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 47 LLPVLGICTQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ 105
L L Q +++ + +Y L F++ R R + R R + E I L YL
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSALDYL- 267
Query: 106 EYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV 165
+S +V+RDLK N++LD + + KI+DFG+ + KD T GT Y+ PE +
Sbjct: 268 -HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVL 324
Query: 166 RKGIYSMKYDVYSYGVLLLQILGGK 190
Y D + GV++ +++ G+
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 96 GITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVG 155
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VG
Sbjct: 122 AVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVG 175
Query: 156 TYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYG 210
T Y+ PE ++ YS++ D++S G+ L+++ G+ Y P LE +G
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR----YPIPPPDAKELEAIFG 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+++ L+H L+ + E+ ++ D + L ++ L++ T I
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYH---LQQNVHFKEETVKLFI 121
Query: 95 EGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV 154
+ L YLQ N I+HRD+K NILLD + I+DF +A + E +
Sbjct: 122 CELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR---ETQITTMA 175
Query: 155 GTYGYVPPEYV--RKGI-YSMKYDVYSYGVLLLQILGGKR 191
GT Y+ PE RKG YS D +S GV ++L G+R
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 47 LLPVLGICTQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ 105
L L Q +++ + +Y L F++ R R + R R + E I L YL
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSALDYL- 264
Query: 106 EYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV 165
+S +V+RDLK N++LD + + KI+DFG+ + KD T GT Y+ PE +
Sbjct: 265 -HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVL 321
Query: 166 RKGIYSMKYDVYSYGVLLLQILGGK 190
Y D + GV++ +++ G+
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR SR S +G+ EE E EV + ++ H N++ + + R + +LI + + L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL---- 102
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP----K 131
FD L ++ L I+ I G+ YL I H DLK NI+L + P K
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+ DFG+A +D E I GT +V PE V ++ D++S GV+ +L G
Sbjct: 160 LIDFGLAHEI-EDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
+G ++AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 75 SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 122
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 123 TSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 182
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+M D++S
Sbjct: 183 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNMTVDIWS 237
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 238 VGCIMAELLTGR 249
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR SR S +G+ EE E EV + ++ H N++ + + R + +LI + + L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL---- 102
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP----K 131
FD L ++ L I+ I G+ YL I H DLK NI+L + P K
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+ DFG+A +D E I GT +V PE V ++ D++S GV+ +L G
Sbjct: 160 LIDFGLAHEI-EDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR SR S +G+ EE E EV + ++ H N++ + + R + +LI + + L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL---- 102
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP----K 131
FD L ++ L I+ I G+ YL I H DLK NI+L + P K
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+ DFG+A +D E I GT +V PE V ++ D++S GV+ +L G
Sbjct: 160 LIDFGLAHEI-EDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 16 MAVKRLSRTSHQG-LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
+A+K++S HQ + E+++ R +H N++ + I + + Y+ ++
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISD 134
++ L + L + + I +GL Y+ + ++HRDLK SN+L++ + KI D
Sbjct: 131 DLYKLLKSQQLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICD 187
Query: 135 FGMARAFTKDECEANTGRI---VGTYGYVPPEYV--RKGIYSMKYDVYSYGVLLLQILGG 189
FG+AR D +TG + V T Y PE + KG Y+ D++S G +L ++L
Sbjct: 188 FGLAR--IADPEHDHTGFLTEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSN 244
Query: 190 K 190
+
Sbjct: 245 R 245
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 42 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 89
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 90 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE V T Y PE + + Y+ D++S
Sbjct: 150 SNLAVNEDCELKILDFGLAR-HTDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 205 VGCIMAELLTGR 216
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 19 KRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
KR SR S +G+ EE E EV + ++ H N++ + + R + +LI + + L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL---- 102
Query: 77 FD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP----K 131
FD L ++ L I+ I G+ YL I H DLK NI+L + P K
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+ DFG+A +D E I GT +V PE V ++ D++S GV+ +L G
Sbjct: 160 LIDFGLAHEI-EDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 27/236 (11%)
Query: 27 QGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
+ +++F EV L H NL+ + G+ KM + + P SL + + +LL
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG 111
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK--D 144
+R + + +G+ YL+ +HRDL A N+LL KI DFG+ RA + D
Sbjct: 112 TLSRYAV--QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 145 ECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG--PNESL 202
R V + + PE ++ +S D + +GV L ++ YG P L
Sbjct: 167 HXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGL 218
Query: 203 NLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEI 258
N + + + K GE + + D V + C DRPT + +
Sbjct: 219 NGSQILHKIDKEGERLPRPEDCPQD---------IYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 56 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 103
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 104 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 163
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 164 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 218
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 219 VGCIMAELLTGR 230
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 45/284 (15%)
Query: 13 GQEMAVKRL------SRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDY 66
G+ +AVK++ S + + E +L+ VNLL VL R+ L++DY
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD-VYLVFDY 92
Query: 67 MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY 126
M + + R +L+ + +++ + + + YL ++HRD+K SNILL+
Sbjct: 93 METD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNA 144
Query: 127 EMNPKISDFGMARAFTK-------------------DECEANTGRIVGTYGYVPPEYVRK 167
E + K++DFG++R+F D+ + V T Y PE +
Sbjct: 145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204
Query: 168 GI-YSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGL--WKNGEGMEFIDSS 224
Y+ D++S G +L +IL GK + + ++N LE G+ + + E +E I S
Sbjct: 205 STKYTKGIDMWSLGCILGEILCGKPI---FPGSSTMNQLERIIGVIDFPSNEDVESIQSP 261
Query: 225 LDDSSSAWKLMRCMQVALLCVQENAADRPTMLEILVMLKSETAD 268
A ++ ++ + Q N D T + L++ + AD
Sbjct: 262 F-----AKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VGT
Sbjct: 132 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVGT 185
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y+ PE ++ YS++ D++S G+ L+++ G+
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 11 PNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
P+GQ MAVKR+ T + ++ ++ + R + RE I + +
Sbjct: 45 PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS 104
Query: 70 KSLD-FYIFDLRRRYLLDWRTRVHIIEGIT----QGLLYLQEYSNLTIVHRDLKASNILL 124
S D FY + +LD I+ IT + L +L+E NL I+HRD+K SNILL
Sbjct: 105 TSFDKFYKYVYS---VLDDVIPEEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILL 159
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSY 179
D N K+ DFG++ + A T R G Y+ PE + R+G Y ++ DV+S
Sbjct: 160 DRSGNIKLCDFGISGQLV--DSIAKT-RDAGCRPYMAPERIDPSASRQG-YDVRSDVWSL 215
Query: 180 GVLLLQILGGK 190
G+ L ++ G+
Sbjct: 216 GITLYELATGR 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 3 VAICQGRLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQ---HVNLLPVLGIC----T 55
VA+ R+PNG+E R EV L RL+ H N++ ++ +C T
Sbjct: 32 VALKSVRVPNGEEGLPISTVR-----------EVALLRRLEAFEHPNVVRLMDVCATSRT 80
Query: 56 QREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVH 114
RE K+ L+++++ ++ L Y+ D L T ++ +GL +L ++N IVH
Sbjct: 81 DREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFL--HAN-CIVH 135
Query: 115 RDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY 174
RDLK NIL+ K++DFG+AR ++ + +V T Y PE + + Y+
Sbjct: 136 RDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVVTLWYRAPEVLLQSTYATPV 192
Query: 175 DVYSYGVLLLQILGGKRTSCYYGPNESLNL 204
D++S G + ++ +R + G +E+ L
Sbjct: 193 DMWSVGCIFAEMF--RRKPLFCGNSEADQL 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 66 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 113
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 174 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 229 VGCIMAELLTGR 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNAMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G +AVK+LSR + E++L ++H N++ +L + T P +
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PAR 100
Query: 71 SL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
SL D Y+ DL T H+ I Q L L+ + I+HRDLK S
Sbjct: 101 SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS 160
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSY 179
N+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 161 NLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWSV 215
Query: 180 GVLLLQILGGK 190
G ++ ++L G+
Sbjct: 216 GCIMAELLTGR 226
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 39/264 (14%)
Query: 9 RLPNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
+P+GQ MAVKR+ T + Q + ++ ++ R RE + I +
Sbjct: 28 HVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 87
Query: 68 PNKSLD-FY--IFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL 124
+ SLD FY + D + D ++ + I + L +L +S L+++HRD+K SN+L+
Sbjct: 88 MDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHL--HSKLSVIHRDVKPSNVLI 143
Query: 125 DYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSY 179
+ K+ DFG++ D + G Y+ PE + +KG YS+K D++S
Sbjct: 144 NALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPELNQKG-YSVKSDIWSL 199
Query: 180 GVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR--- 236
G+ +++ L +L + Y W G + + +++ S +
Sbjct: 200 GITMIE----------------LAILRFPYDSW--GTPFQQLKQVVEEPSPQLPADKFSA 241
Query: 237 -CMQVALLCVQENAADRPTMLEIL 259
+ C+++N+ +RPT E++
Sbjct: 242 EFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 66 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 113
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE V T Y PE + + Y+ D++S
Sbjct: 174 SNLAVNEDCELKILDFGLAR-HTDDEMXGX----VATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 229 VGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 65 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 112
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 113 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 172
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 173 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 228 VGCIMAELLTGR 239
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 96 GITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVG 155
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ + AN+ VG
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS--FVG 165
Query: 156 TYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
T Y+ PE ++ YS++ D++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 42 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 89
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 90 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 150 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 205 VGCIMAELLTGR 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 13 GQEMAVK-----RLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD 65
G+E A K RLS +S +G+ EE E EV + ++H N++ + I + + +LI +
Sbjct: 30 GKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88
Query: 66 YMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI-L 123
+ L FD L + L ++ I G+ YL + I H DLK NI L
Sbjct: 89 LVSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 141
Query: 124 LDYEM-NPKIS--DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
LD + NP+I DFG+A K E I GT +V PE V ++ D++S G
Sbjct: 142 LDKNVPNPRIKLIDFGIAH---KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 198
Query: 181 VLLLQILGG 189
V+ +L G
Sbjct: 199 VITYILLSG 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 13 GQEMAVK-----RLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD 65
G+E A K RLS +S +G+ EE E EV + ++H N++ + I + + +LI +
Sbjct: 37 GKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 95
Query: 66 YMPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI-L 123
+ L FD L + L ++ I G+ YL + I H DLK NI L
Sbjct: 96 LVSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 148
Query: 124 LDYEM-NPKIS--DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
LD + NP+I DFG+A K E I GT +V PE V ++ D++S G
Sbjct: 149 LDKNVPNPRIKLIDFGIAH---KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205
Query: 181 VLLLQILGG 189
V+ +L G
Sbjct: 206 VITYILLSG 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 28/247 (11%)
Query: 27 QGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
+ +++F EV L H NL+ + G+ KM + + P SL + + +LL
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG 111
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK--D 144
+R + + +G+ YL+ +HRDL A N+LL KI DFG+ RA + D
Sbjct: 112 TLSRYAV--QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 145 ECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG--PNESL 202
R V + + PE ++ +S D + +GV L ++ YG P L
Sbjct: 167 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGL 218
Query: 203 NLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-VM 261
N + + + K GE + + D V + C DRPT + + +
Sbjct: 219 NGSQILHKIDKEGERLPRPEDCPQD---------IYNVMVQCWAHKPEDRPTFVALRDFL 269
Query: 262 LKSETAD 268
L+++ D
Sbjct: 270 LEAQPTD 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
E AVK + ++ EE E ++ QH N++ + + + L+ + M L
Sbjct: 54 EYAVKVIDKSKRDPSEEIEILLRYG---QHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL-LDYEMNP--- 130
I LR+++ + R ++ I + + YL +VHRDLK SNIL +D NP
Sbjct: 111 KI--LRQKFFSE-REASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECL 164
Query: 131 KISDFGMARAFTKDECEANTGRIVG---TYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+I DFG A+ + A G ++ T +V PE +++ Y D++S G+LL +L
Sbjct: 165 RICDFGFAK-----QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 188 GGKRTSCYYGPNES 201
G T GP+++
Sbjct: 220 AG-YTPFANGPSDT 232
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 27/236 (11%)
Query: 27 QGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
+ +++F EV L H NL+ + G+ KM + + P SL + + +LL
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG 115
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK--D 144
+R + + +G+ YL+ +HRDL A N+LL KI DFG+ RA + D
Sbjct: 116 TLSRYAV--QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 145 ECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG--PNESL 202
R V + + PE ++ +S D + +GV L ++ YG P L
Sbjct: 171 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGL 222
Query: 203 NLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEI 258
N + + + K GE + + D V + C DRPT + +
Sbjct: 223 NGSQILHKIDKEGERLPRPEDCPQD---------IYNVMVQCWAHKPEDRPTFVAL 269
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 42 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 89
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 90 RSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 150 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 205 VGCIMAELLTGR 216
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 27/236 (11%)
Query: 27 QGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLD 86
+ +++F EV L H NL+ + G+ KM + + P SL + + +LL
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG 111
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTK--D 144
+R + + +G+ YL+ +HRDL A N+LL KI DFG+ RA + D
Sbjct: 112 TLSRYAV--QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 145 ECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG--PNESL 202
R V + + PE ++ +S D + +GV L ++ YG P L
Sbjct: 167 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGL 218
Query: 203 NLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEI 258
N + + + K GE + + D V + C DRPT + +
Sbjct: 219 NGSQILHKIDKEGERLPRPEDCPQD---------IYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 47 LLPVLGICTQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ 105
L L Q +++ + +Y L F++ R R + R R + E I L YL
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSALDYLH 125
Query: 106 EYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV 165
N +V+RDLK N++LD + + KI+DFG+ + KD A GT Y+ PE +
Sbjct: 126 SEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAPEVL 181
Query: 166 RKGIYSMKYDVYSYGVLLLQILGGK 190
Y D + GV++ +++ G+
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
E AVK + ++ EE E ++ QH N++ + + + L+ + M L
Sbjct: 54 EYAVKVIDKSKRDPSEEIEILLRYG---QHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL-LDYEMNP--- 130
I LR+++ + R ++ I + + YL +VHRDLK SNIL +D NP
Sbjct: 111 KI--LRQKFFSE-REASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECL 164
Query: 131 KISDFGMARAFTKDECEANTGRIVG---TYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+I DFG A+ + A G ++ T +V PE +++ Y D++S G+LL +L
Sbjct: 165 RICDFGFAK-----QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 188 GGKRTSCYYGPNES 201
G T GP+++
Sbjct: 220 AG-YTPFANGPSDT 232
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I + L YL+E ++HRD+K SNILLD K+ DFG++ D+ + R G
Sbjct: 133 IVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGC 187
Query: 157 YGYVPPEYV-----RKGIYSMKYDVYSYGVLLLQILGGK 190
Y+ PE + K Y ++ DV+S G+ L+++ G+
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
E AVK + ++ EE E ++ QH N++ + + + ++ + M L
Sbjct: 49 EFAVKIIDKSKRDPTEEIEILLRYG---QHPNIITLKDVYDDGKYVYVVTELMKGGELLD 105
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL-LDYEMNP--- 130
I LR+++ + R ++ IT+ + YL +VHRDLK SNIL +D NP
Sbjct: 106 KI--LRQKFFSE-REASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESI 159
Query: 131 KISDFGMARAFTKDECEANTGRIVG---TYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+I DFG A+ + A G ++ T +V PE + + Y D++S GVLL +L
Sbjct: 160 RICDFGFAK-----QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214
Query: 188 GGKRTSCYYGPNES 201
G T GP+++
Sbjct: 215 TG-YTPFANGPDDT 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 47 LLPVLGICTQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ 105
L L Q +++ + +Y L F++ R R + R R + E I L YL
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSALDYLH 127
Query: 106 EYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV 165
N +V+RDLK N++LD + + KI+DFG+ + KD A GT Y+ PE +
Sbjct: 128 SEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAPEVL 183
Query: 166 RKGIYSMKYDVYSYGVLLLQILGGK 190
Y D + GV++ +++ G+
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 47 LLPVLGICTQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ 105
L L Q +++ + +Y L F++ R R + R R + E I L YL
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSALDYLH 126
Query: 106 EYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV 165
N +V+RDLK N++LD + + KI+DFG+ + KD A GT Y+ PE +
Sbjct: 127 SEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAPEVL 182
Query: 166 RKGIYSMKYDVYSYGVLLLQILGGK 190
Y D + GV++ +++ G+
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G +AVK+LSR + E++L ++H N++ +L + T P +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PAR 94
Query: 71 SL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
SL D Y+ DL T H+ I Q L L+ + I+HRDLK S
Sbjct: 95 SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS 154
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSY 179
N+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 155 NLAVNEDXELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWSV 209
Query: 180 GVLLLQILGGK 190
G ++ ++L G+
Sbjct: 210 GCIMAELLTGR 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYS 171
I++RDLK NILLD + KI+DFG A+ + D T + GT Y+ PE V Y+
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAK-YVPDV----TYXLCGTPDYIAPEVVSTKPYN 181
Query: 172 MKYDVYSYGVLLLQILGG 189
D +S+G+L+ ++L G
Sbjct: 182 KSIDWWSFGILIYEMLAG 199
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 13 GQEMAVKRLSR----TSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDY 66
G+E A K + + +S +G+ EE E EV + ++H N++ + I + + +LI +
Sbjct: 51 GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 110
Query: 67 MPNKSLDFYIFD-LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNI-LL 124
+ L FD L + L ++ I G+ YL + I H DLK NI LL
Sbjct: 111 VSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLL 163
Query: 125 DYEM-NPKIS--DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
D + NP+I DFG+A K E I GT +V PE V ++ D++S GV
Sbjct: 164 DKNVPNPRIKLIDFGIAH---KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 220
Query: 182 LLLQILGG 189
+ +L G
Sbjct: 221 ITYILLSG 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 51 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 98
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 99 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 159 SNLAVNEDXELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL YL+E I+HRD+K SNIL++ K+ DFG++ DE VGT
Sbjct: 116 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEM---ANEFVGT 169
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y+ PE ++ YS++ D++S G+ L+++ G+
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 51 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 98
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 99 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 159 SNLAVNEDXELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 9 RLPNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
+P+GQ MAVKR+ T + Q + ++ ++ R RE + I +
Sbjct: 72 HVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131
Query: 68 PNKSLD-FYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY 126
+ SLD FY + + + I I + L +L +S L+++HRD+K SN+L++
Sbjct: 132 MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL--HSKLSVIHRDVKPSNVLINA 189
Query: 127 EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGV 181
K+ DFG++ + D G Y+ PE + +KG YS+K D++S G+
Sbjct: 190 LGQVKMCDFGIS-GYLVDSVAKTID--AGCKPYMAPERINPELNQKG-YSVKSDIWSLGI 245
Query: 182 LLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR----C 237
+++ L +L + Y W G + + +++ S +
Sbjct: 246 TMIE----------------LAILRFPYDSW--GTPFQQLKQVVEEPSPQLPADKFSAEF 287
Query: 238 MQVALLCVQENAADRPTMLEIL 259
+ C+++N+ +RPT E++
Sbjct: 288 VDFTSQCLKKNSKERPTYPELM 309
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TGX-VATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 57 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 104
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 105 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 164
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 165 SNLAVNEDXELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 220 VGCIMAELLTGR 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 100
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 101 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 161 SNLAVNEDCELKILDFGLAR-HTADEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 216 VGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 100
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 101 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 161 SNLAVNEDCELKILDFGLAR-HTADEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 216 VGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 100
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 101 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 161 SNLAVNEDCELKILDFGLAR-HTADEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 216 VGCIMAELLTGR 227
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 25/151 (16%)
Query: 57 REEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ------EYSNL 110
R E +L+ +Y PN SL Y+ + DW + + +T+GL YL ++
Sbjct: 84 RMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP 139
Query: 111 TIVHRDLKASNILLDYEMNPKISDFGMARAFTKDEC----EANTGRI--VGTYGYVPPEY 164
I HRDL + N+L+ + ISDFG++ T + E + I VGT Y+ PE
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE- 198
Query: 165 VRKGIYSMK--------YDVYSYGVLLLQIL 187
V +G +++ D+Y+ G++ +I
Sbjct: 199 VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 52 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 99
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 100 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 160 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 215 VGCIMAELLTGR 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 100
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 101 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 161 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 216 VGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 51 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 98
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 99 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 159 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 45 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 92
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 93 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 152
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 153 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 207
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 208 VGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 58 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 105
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 106 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 166 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 221 VGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 58 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 105
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 106 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 166 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 221 VGCIMAELLTGR 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 48 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 95
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 96 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 156 SNLAVNEDSELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 48 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 95
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 96 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 156 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 48 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 95
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 96 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 156 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 51 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 98
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 99 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 159 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 57 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 104
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 105 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 164
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 165 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 220 VGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 48 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 95
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 96 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 156 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 52 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 99
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 100 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 160 SNLAVNEDSELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 215 VGCIMAELLTGR 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 13 GQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G+++A+K+ + S + E + E+++ +L H N++ + ++ L + +P +
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK--LAPNDLPLLA 96
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEG--------ITQGLLYLQEYSNLTIVHRDLKASNIL 123
+++ R+YL + + EG I+ L YL E I+HRDLK NI+
Sbjct: 97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIV 153
Query: 124 LD---YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
L + KI D G A+ + E VGT Y+ PE + + Y++ D +S+G
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 181 VLLLQILGGKR 191
L + + G R
Sbjct: 211 TLAFECITGFR 221
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 43 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 90
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 91 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 150
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 151 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 206 VGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 43 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 90
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 91 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 150
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 151 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 206 VGCIMAELLTGR 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 13 GQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
G+++A+K+ + S + E + E+++ +L H N++ + ++ L + +P +
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK--LAPNDLPLLA 97
Query: 72 LDFYIFDLRRRYLLDWRTRVHIIEG--------ITQGLLYLQEYSNLTIVHRDLKASNIL 123
+++ R+YL + + EG I+ L YL E I+HRDLK NI+
Sbjct: 98 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIV 154
Query: 124 LD---YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYG 180
L + KI D G A+ + E VGT Y+ PE + + Y++ D +S+G
Sbjct: 155 LQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 181 VLLLQILGGKR 191
L + + G R
Sbjct: 212 TLAFECITGFR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 44 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 91
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 92 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 151
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 152 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 206
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 207 VGCIMAELLTGR 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 69 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 116
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 117 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 176
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 177 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 232 VGCIMAELLTGR 243
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G +AVK+LSR + E++L ++H N++ +L + T P +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PAR 100
Query: 71 SL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
SL D Y+ DL T H+ I Q L L+ + I+HRDLK S
Sbjct: 101 SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS 160
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSY 179
N+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 161 NLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWSV 215
Query: 180 GVLLLQILGGK 190
G ++ ++L G+
Sbjct: 216 GCIMAELLTGR 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 42 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 89
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 90 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 150 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 205 VGCIMAELLTGR 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 66 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 113
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 174 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 229 VGCIMAELLTGR 240
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 15 EMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEK------MLIYDY 66
++AVK L + +EEF E H ++ ++G+ + K M+I +
Sbjct: 53 KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPF 112
Query: 67 MPNKSLDFYIFDLR---RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL 123
M + L ++ R + L +T V + I G+ YL S+ +HRDL A N +
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCM 169
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLL 183
L +M ++DFG++R + ++ E + +Y++ DV+++GV +
Sbjct: 170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTM 229
Query: 184 LQILGGKRTSCYYGPNESLNLLEYAYG 210
+I+ +T Y E+ + Y G
Sbjct: 230 WEIMTRGQTP--YAGIENAEIYNYLIG 254
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 30/191 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G +AVK+LSR + E++L ++H N++ +L + T P +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PAR 117
Query: 71 SL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
SL D Y+ DL T H+ I Q L L+ + I+HRDLK S
Sbjct: 118 SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS 177
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSY 179
N+ ++ + KI DFG+AR T DE V T Y PE + + Y+ D++S
Sbjct: 178 NLAVNEDCELKILDFGLAR-HTDDEMXG----YVATRWYRAPEIMLNWMHYNQTVDIWSV 232
Query: 180 GVLLLQILGGK 190
G ++ ++L G+
Sbjct: 233 GCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 65 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 112
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 113 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 172
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 173 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 228 VGCIMAELLTGR 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+ + L+H N++ + + ++ +L+++++ DL++ LLD +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ--------DLKK--LLD--VCEGGL 97
Query: 95 EGITQGLLYLQEYSNLT------IVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
E +T LQ + + ++HRDLK N+L++ E KI+DFG+ARAF
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRK 156
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLL 205
T IV + P + YS D++S G + +++ G T + G +E+ L+
Sbjct: 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG--TPLFPGVSEADQLM 211
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LS+ + E++L ++H N++ +L + T P
Sbjct: 58 TGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 105
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 106 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DFG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 166 SNLAVNEDCELKILDFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 221 VGCIMAELLTGR 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 35 EVKLTARLQ---HVNLLPVLGIC----TQREEKM-LIYDYMPNKSLDFYIFDLRRRYLLD 86
EV L RL+ H N++ ++ +C T RE K+ L+++++ ++ L Y+ D L
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLP 118
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDEC 146
T ++ +GL +L ++N IVHRDLK NIL+ K++DFG+AR ++
Sbjct: 119 AETIKDLMRQFLRGLDFL--HAN-CIVHRDLKPENILVTSGGTVKLADFGLARIYS---Y 172
Query: 147 EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSC 194
+ +V T Y PE + + Y+ D++S G + ++ K C
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+ + L+H N++ + + ++ +L+++++ DL++ LLD +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ--------DLKK--LLD--VCEGGL 97
Query: 95 EGITQGLLYLQEYSNLT------IVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
E +T LQ + + ++HRDLK N+L++ E KI+DFG+ARAF
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRK 156
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLL 205
T +V + P + YS D++S G + +++ G T + G +E+ L+
Sbjct: 157 YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG--TPLFPGVSEADQLM 211
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI D+G+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDYGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 4 AICQ---GRLPNGQEMAVKRLSRTSHQGL--EEFENEVKLTARLQHVNLLPVLGICTQRE 58
A+C GR G ++A+K+L R L + E++L ++H N++ +L + T E
Sbjct: 40 AVCSAVDGR--TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE 97
Query: 59 EKMLIYDY---MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHR 115
D+ MP D ++ L + R + ++ + +GL Y+ I+HR
Sbjct: 98 TLDDFTDFYLVMPFMGTDLGKL-MKHEKLGEDRIQF-LVYQMLKGLRYIHAAG---IIHR 152
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKY 174
DLK N+ ++ + KI DFG+AR + ++ V T Y PE + + Y+
Sbjct: 153 DLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 175 DVYSYGVLLLQILGGK 190
D++S G ++ +++ GK
Sbjct: 208 DIWSVGCIMAEMITGK 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
A+K L +T + + E+ + RL H N++ + I E L+ + + L
Sbjct: 82 ALKVLKKTVDKKI--VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL---- 135
Query: 77 FD--LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY---EMNPK 131
FD + + Y + R ++ I + + YL E IVHRDLK N+L + K
Sbjct: 136 FDRIVEKGYYSE-RDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLK 191
Query: 132 ISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
I+DFG+++ E + + GT GY PE +R Y + D++S G++ +L G
Sbjct: 192 IADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 45/203 (22%)
Query: 11 PNGQEMAVKRLSRTSHQGLEEFEN---------EVKLTARLQHVNLLPVLGICTQREEKM 61
P G+ +A+K++ E F+ E+K+ +H N++ + I QR +
Sbjct: 34 PTGEIVAIKKI--------EPFDKPLFALRTLREIKILKHFKHENIITIFNI--QRPDSF 83
Query: 62 LIYDYMPNKSLDFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHR 115
++ + YI DL R + HI I Q L ++ ++HR
Sbjct: 84 ENFN-------EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEAN----TGRIVGTYGYVPPEYVR----- 166
DLK SN+L++ + K+ DFG+AR DE A+ TG+ G YV + R
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMTEYVATRWYRAPEVM 194
Query: 167 --KGIYSMKYDVYSYGVLLLQIL 187
YS DV+S G +L ++
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 94 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 140
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 141 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGC 199
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 200 IFAEMV--TRRALFPGDSE 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 12 NGQEMAVKRLSR-TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G+ +A+K + + T L + E++ L+H ++ + + + ++ +Y P
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L YI R L + TRV + I + Y+ HRDLK N+L D
Sbjct: 94 ELFDYIISQDR--LSEEETRV-VFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKL 147
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR-KGIYSMKYDVYSYGVLLLQILGG 189
K+ DFG+ A K + + G+ Y PE ++ K + DV+S G+LL ++ G
Sbjct: 148 KLIDFGLC-AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 9 RLPNGQEMAVKRLSRT-SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYM 67
+P+GQ AVKR+ T + Q + ++ ++ R RE + I +
Sbjct: 55 HVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXEL 114
Query: 68 PNKSLD-FYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY 126
+ SLD FY + + + I I + L +L +S L+++HRD+K SN+L++
Sbjct: 115 XDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL--HSKLSVIHRDVKPSNVLINA 172
Query: 127 EMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV-----RKGIYSMKYDVYSYGV 181
K DFG++ D + G Y PE + +KG YS+K D++S G+
Sbjct: 173 LGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPERINPELNQKG-YSVKSDIWSLGI 228
Query: 182 LLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMR----C 237
++ L +L + Y W G + + +++ S +
Sbjct: 229 TXIE----------------LAILRFPYDSW--GTPFQQLKQVVEEPSPQLPADKFSAEF 270
Query: 238 MQVALLCVQENAADRPTMLEI 258
+ C+++N+ +RPT E+
Sbjct: 271 VDFTSQCLKKNSKERPTYPEL 291
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
YMP + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 122 YMPGGDM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ K++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
YMP + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 122 YMPGGDM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ K++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 13 GQEMAVKR-LSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKM--------L 62
GQ++A+K+ L +G E+K+ L+H N++ ++ IC + L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYL 102
Query: 63 IYDY--------MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVH 114
++D+ + N + F + +++R +++ + GL Y+ I+H
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFTLSEIKR-----------VMQMLLNGLYYIHRNK---ILH 148
Query: 115 RDLKASNILLDYEMNPKISDFGMARAFT--KDECEANTGRIVGTYGYVPPE-YVRKGIYS 171
RD+KA+N+L+ + K++DFG+ARAF+ K+ V T Y PPE + + Y
Sbjct: 149 RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYG 208
Query: 172 MKYDVYSYGVLLLQI 186
D++ G ++ ++
Sbjct: 209 PPIDLWGAGCIMAEM 223
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ + ++ + L VHRD+K NIL+D + +++DFG +D + VGT
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGT 239
Query: 157 YGYVPPEYVR-----KGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGL 211
Y+ PE ++ KG Y + D +S GV + ++L G+ P + +L+E +
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET------PFYAESLVETYGKI 293
Query: 212 WKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQEN 248
+ E +F D S +A L+R L+C +E+
Sbjct: 294 MNHKERFQFPTQVTDVSENAKDLIR----RLICSREH 326
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 13 GQEMAVKR-LSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKM--------L 62
GQ++A+K+ L +G E+K+ L+H N++ ++ IC + L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 63 IYDY--------MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVH 114
++D+ + N + F + +++R +++ + GL Y+ I+H
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFTLSEIKR-----------VMQMLLNGLYYIHRNK---ILH 148
Query: 115 RDLKASNILLDYEMNPKISDFGMARAFT--KDECEANTGRIVGTYGYVPPE-YVRKGIYS 171
RD+KA+N+L+ + K++DFG+ARAF+ K+ V T Y PPE + + Y
Sbjct: 149 RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYG 208
Query: 172 MKYDVYSYGVLLLQI 186
D++ G ++ ++
Sbjct: 209 PPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 13 GQEMAVKR-LSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKM--------L 62
GQ++A+K+ L +G E+K+ L+H N++ ++ IC + L
Sbjct: 42 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101
Query: 63 IYDY--------MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVH 114
++D+ + N + F + +++R +++ + GL Y+ I+H
Sbjct: 102 VFDFCEHDLAGLLSNVLVKFTLSEIKR-----------VMQMLLNGLYYIHRNK---ILH 147
Query: 115 RDLKASNILLDYEMNPKISDFGMARAFT--KDECEANTGRIVGTYGYVPPE-YVRKGIYS 171
RD+KA+N+L+ + K++DFG+ARAF+ K+ V T Y PPE + + Y
Sbjct: 148 RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYG 207
Query: 172 MKYDVYSYGVLLLQI 186
D++ G ++ ++
Sbjct: 208 PPIDLWGAGCIMAEM 222
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 4 AICQGRLPNGQEMAVKRLSRTSHQG-----------LEEFENEVKLTARLQHVNLLPVLG 52
A+C G G +A+KR+ T G + E++L H N+L +
Sbjct: 37 AVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD 96
Query: 53 ICTQREE----KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYS 108
I EE K+ + + L I D +R ++ + + + I GL L E
Sbjct: 97 IFVHFEEPAMHKLYLVTELMRTDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG 154
Query: 109 NLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR-- 166
+VHRDL NILL + I DF +AR +D +AN V Y PE V
Sbjct: 155 ---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVMQF 208
Query: 167 KGIYSMKYDVYSYGVLLLQILGGK---RTSCYYG 197
KG ++ D++S G ++ ++ K R S +Y
Sbjct: 209 KG-FTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 4 AICQGRLPNGQEMAVKRLSRTSHQG-----------LEEFENEVKLTARLQHVNLLPVLG 52
A+C G G +A+KR+ T G + E++L H N+L +
Sbjct: 37 AVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD 96
Query: 53 ICTQREE----KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYS 108
I EE K+ + + L I D +R ++ + + + I GL L E
Sbjct: 97 IFVHFEEPAMHKLYLVTELMRTDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG 154
Query: 109 NLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR-- 166
+VHRDL NILL + I DF +AR +D +AN V Y PE V
Sbjct: 155 ---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVMQF 208
Query: 167 KGIYSMKYDVYSYGVLLLQILGGK---RTSCYYG 197
KG ++ D++S G ++ ++ K R S +Y
Sbjct: 209 KG-FTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI DF +AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDFYLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYD---- 65
G+ +A+K++ T +G+ E+ L L H N++ +L + + L+++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ 85
Query: 66 ----YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
+M +L L + YL + QGL + + ++HRDLK N
Sbjct: 86 DLKTFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 132
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 133 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 192 IFAEMV--TRRALFPGDSE 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVN--LLPVLGICTQREEKM-LIYDYMP 68
G+ A+K L + +E + V + LQ+ L L Q +++ + +Y
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L F++ R R + R R + E I L YL + +V+RD+K N++LD +
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG 188
+ KI+DFG+ + D T GT Y+ PE + Y D + GV++ +++
Sbjct: 143 HIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 189 GK 190
G+
Sbjct: 201 GR 202
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 38/195 (19%)
Query: 13 GQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNK 70
G +AVK+LSR + E++L ++H N++ +L + T P +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PAR 94
Query: 71 SL----DFYIFD----------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRD 116
SL D Y+ ++ + L D + +I I +GL Y+ + I+HRD
Sbjct: 95 SLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-LIYQILRGLKYIH---SADIIHRD 150
Query: 117 LKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYD 175
LK SN+ ++ + KI DFG+ R T DE TG V T Y PE + + Y+ D
Sbjct: 151 LKPSNLAVNEDSELKILDFGLCR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVD 205
Query: 176 VYSYGVLLLQILGGK 190
++S G ++ ++L G+
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 13 GQEMAVKR-LSRTSHQGLE-EFENEVKLTARLQHVNLLPVLGICTQREEKM--------L 62
GQ++A+K+ L +G E+K+ L+H N++ ++ IC + L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 63 IYDY--------MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVH 114
++D+ + N + F + +++R +++ + GL Y+ I+H
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFTLSEIKR-----------VMQMLLNGLYYIHRNK---ILH 148
Query: 115 RDLKASNILLDYEMNPKISDFGMARAFT--KDECEANTGRIVGTYGYVPPE-YVRKGIYS 171
RD+KA+N+L+ + K++DFG+ARAF+ K+ V T Y PPE + + Y
Sbjct: 149 RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYG 208
Query: 172 MKYDVYSYGVLLLQI 186
D++ G ++ ++
Sbjct: 209 PPIDLWGAGCIMAEM 223
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVN--LLPVLGICTQREEKM-LIYDYMP 68
G+ A+K L + +E + V + LQ+ L L Q +++ + +Y
Sbjct: 32 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 91
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L F++ R R + R R + E I L YL + +V+RD+K N++LD +
Sbjct: 92 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYLH---SRDVVYRDIKLENLMLDKDG 145
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG 188
+ KI+DFG+ + D T GT Y+ PE + Y D + GV++ +++
Sbjct: 146 HIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 203
Query: 189 GK 190
G+
Sbjct: 204 GR 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIY----- 64
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 88
Query: 65 ---DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
D+M +L L + YL + QGL + + ++HRDLK N
Sbjct: 89 DLKDFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 135
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 136 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 195 IFAEMV--TRRALFPGDSE 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 134
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 135 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 194 IFAEMV--TRRALFPGDSE 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 132
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 133 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 192 IFAEMV--TRRALFPGDSE 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIY----- 64
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 89
Query: 65 ---DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
D+M +L L + YL + QGL + + ++HRDLK N
Sbjct: 90 DLKDFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 136
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 137 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 196 IFAEMV--TRRALFPGDSE 212
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 94 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 140
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 141 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 199
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 200 IFAEMV--TRRALFPGDSE 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 132
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 133 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 192 IFAEMV--TRRALFPGDSE 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 45/203 (22%)
Query: 11 PNGQEMAVKRLSRTSHQGLEEFEN---------EVKLTARLQHVNLLPVLGICTQREEKM 61
P G+ +A+K++ E F+ E+K+ +H N++ + I QR +
Sbjct: 34 PTGEIVAIKKI--------EPFDKPLFALRTLREIKILKHFKHENIITIFNI--QRPDSF 83
Query: 62 LIYDYMPNKSLDFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHR 115
++ + YI DL R + HI I Q L ++ ++HR
Sbjct: 84 ENFN-------EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEAN----TGR------IVGTYGYVPPEY- 164
DLK SN+L++ + K+ DFG+AR DE A+ TG+ V T Y PE
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194
Query: 165 VRKGIYSMKYDVYSYGVLLLQIL 187
+ YS DV+S G +L ++
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+ + L+H N++ + + ++ +L+++++ DL++ LLD +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ--------DLKK--LLD--VCEGGL 97
Query: 95 EGITQGLLYLQEYSNLT------IVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEA 148
E +T LQ + + ++HRDLK N+L++ E KI+DFG+ARAF
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRK 156
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
T +V + P + YS D++S G + +++ G
Sbjct: 157 YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVN--LLPVLGICTQREEKM-LIYDYMP 68
G+ A+K L + +E + V + LQ+ L L Q +++ + +Y
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L F++ R R + R R + E I L YL + +V+RD+K N++LD +
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG 188
+ KI+DFG+ + D T GT Y+ PE + Y D + GV++ +++
Sbjct: 143 HIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 189 GK 190
G+
Sbjct: 201 GR 202
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 91 VHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANT 150
+I I +GL +L ++ ++HRD+K N+LL K+ DFG++ + NT
Sbjct: 132 AYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 188
Query: 151 GRIVGTYGYVPPEYVR-----KGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLL 205
+GT ++ PE + Y K D++S G+ +++ G C P +L L+
Sbjct: 189 --FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 91 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 137
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 138 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 196
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 197 IFAEMV--TRRALFPGDSE 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIY----- 64
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 65 ---DYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
D+M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKDFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPEN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 42 LQHVNLLPVLGICT----QREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEG 96
+H N++ + +CT RE K+ L+++++ ++ L Y+ D + T ++
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQ 128
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL +L + +VHRDLK NIL+ K++DFG+AR ++ + +V T
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNE 200
Y PE + + Y+ D++S G + ++ +R + G ++
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSD 224
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 20/194 (10%)
Query: 10 LPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQ-HVNLLPVLGICTQREEKMLIYDYMP 68
L QE AVK + + EV++ + Q H N+L ++ + + L+++ M
Sbjct: 35 LITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMR 94
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY-- 126
S+ +I +RR+ + V +++ + L +L N I HRDLK NIL ++
Sbjct: 95 GGSILSHIH--KRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENILCEHPN 148
Query: 127 EMNP-KISDFGMARA--FTKDECEANTGRIV---GTYGYVPPEYV-----RKGIYSMKYD 175
+++P KI DFG+ D +T ++ G+ Y+ PE V IY + D
Sbjct: 149 QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 176 VYSYGVLLLQILGG 189
++S GV+L +L G
Sbjct: 209 LWSLGVILYILLSG 222
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVL-------GICTQREEKMLIYD 65
G+E+AVK S + E E+ T L+H N+L + G TQ L+ D
Sbjct: 65 GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQL---WLVSD 120
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKAS 120
Y + SL FD RY + + + GL +L I HRDLK+
Sbjct: 121 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176
Query: 121 NILLDYEMNPKISDFGMA--RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY---- 174
NIL+ I+D G+A D + VGT Y+ PE + I +MK+
Sbjct: 177 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI-NMKHFESF 235
Query: 175 ---DVYSYGVLLLQI 186
D+Y+ G++ +I
Sbjct: 236 KRADIYAMGLVFWEI 250
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVL-------GICTQREEKMLIYD 65
G+E+AVK S + E E+ T L+H N+L + G TQ L+ D
Sbjct: 29 GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQL---WLVSD 84
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKAS 120
Y + SL FD RY + + + GL +L I HRDLK+
Sbjct: 85 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 140
Query: 121 NILLDYEMNPKISDFGMA--RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY---- 174
NIL+ I+D G+A D + VGT Y+ PE + I +MK+
Sbjct: 141 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI-NMKHFESF 199
Query: 175 ---DVYSYGVLLLQI 186
D+Y+ G++ +I
Sbjct: 200 KRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVL-------GICTQREEKMLIYD 65
G+E+AVK S + E E+ T L+H N+L + G TQ L+ D
Sbjct: 32 GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQL---WLVSD 87
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKAS 120
Y + SL FD RY + + + GL +L I HRDLK+
Sbjct: 88 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 143
Query: 121 NILLDYEMNPKISDFGMA--RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY---- 174
NIL+ I+D G+A D + VGT Y+ PE + I +MK+
Sbjct: 144 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI-NMKHFESF 202
Query: 175 ---DVYSYGVLLLQI 186
D+Y+ G++ +I
Sbjct: 203 KRADIYAMGLVFWEI 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVN--LLPVLGICTQREEKM-LIYDYMP 68
G+ A+K L + +E + V + LQ+ L L Q +++ + +Y
Sbjct: 34 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 93
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L F++ R R + R R + E I L YL + +V+RD+K N++LD +
Sbjct: 94 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYLH---SRDVVYRDIKLENLMLDKDG 147
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG 188
+ KI+DFG+ + D A GT Y+ PE + Y D + GV++ +++
Sbjct: 148 HIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 205
Query: 189 GK 190
G+
Sbjct: 206 GR 207
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 45/203 (22%)
Query: 11 PNGQEMAVKRLSRTSHQGLEEFEN---------EVKLTARLQHVNLLPVLGICTQREEKM 61
P G+ +A+K++ E F+ E+K+ +H N++ + I QR +
Sbjct: 34 PTGEIVAIKKI--------EPFDKPLFALRTLREIKILKHFKHENIITIFNI--QRPDSF 83
Query: 62 LIYDYMPNKSLDFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHR 115
++ + YI DL R + HI I Q L ++ ++HR
Sbjct: 84 ENFN-------EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 116 DLKASNILLDYEMNPKISDFGMARAFTKDECEAN----TGR------IVGTYGYVPPEY- 164
DLK SN+L++ + K+ DFG+AR DE A+ TG+ V T Y PE
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMTEXVATRWYRAPEVM 194
Query: 165 VRKGIYSMKYDVYSYGVLLLQIL 187
+ YS DV+S G +L ++
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDY--------MPNKSLDFYIFDLRRRYLLD 86
E+ L L H N++ +L + + L++++ M +L L + YL
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDEC 146
+ QGL + + ++HRDLK N+L++ E K++DFG+ARAF
Sbjct: 112 ----------LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PV 157
Query: 147 EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNE 200
T +V + P + YS D++S G + +++ R + + G +E
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV--TRRALFPGDSE 209
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVL-------GICTQREEKMLIYD 65
G+E+AVK S + E E+ T L+H N+L + G TQ L+ D
Sbjct: 26 GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQL---WLVSD 81
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKAS 120
Y + SL FD RY + + + GL +L I HRDLK+
Sbjct: 82 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137
Query: 121 NILLDYEMNPKISDFGMA--RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY---- 174
NIL+ I+D G+A D + VGT Y+ PE + I +MK+
Sbjct: 138 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI-NMKHFESF 196
Query: 175 ---DVYSYGVLLLQI 186
D+Y+ G++ +I
Sbjct: 197 KRADIYAMGLVFWEI 211
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDY--------MPNKSLDFYIFDLRRRYLLD 86
E+ L L H N++ +L + + L++++ M +L L + YL
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDEC 146
+ QGL + + ++HRDLK N+L++ E K++DFG+ARAF
Sbjct: 111 ----------LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PV 156
Query: 147 EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNE 200
T +V + P + YS D++S G + +++ R + + G +E
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV--TRRALFPGDSE 208
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI FG+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILGFGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLSFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF T +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVL-------GICTQREEKMLIYD 65
G+E+AVK S + E E+ T L+H N+L + G TQ L+ D
Sbjct: 27 GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQL---WLVSD 82
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKAS 120
Y + SL FD RY + + + GL +L I HRDLK+
Sbjct: 83 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 138
Query: 121 NILLDYEMNPKISDFGMA--RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY---- 174
NIL+ I+D G+A D + VGT Y+ PE + I +MK+
Sbjct: 139 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI-NMKHFESF 197
Query: 175 ---DVYSYGVLLLQI 186
D+Y+ G++ +I
Sbjct: 198 KRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVL-------GICTQREEKMLIYD 65
G+E+AVK S + E E+ T L+H N+L + G TQ L+ D
Sbjct: 52 GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKDNGTWTQL---WLVSD 107
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKAS 120
Y + SL FD RY + + + GL +L I HRDLK+
Sbjct: 108 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 163
Query: 121 NILLDYEMNPKISDFGMA--RAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKY---- 174
NIL+ I+D G+A D + VGT Y+ PE + I +MK+
Sbjct: 164 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI-NMKHFESF 222
Query: 175 ---DVYSYGVLLLQI 186
D+Y+ G++ +I
Sbjct: 223 KRADIYAMGLVFWEI 237
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVN--LLPVLGICTQREEKM-LIYDYMP 68
G+ A+K L + +E + V + LQ+ L L Q +++ + +Y
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L F++ R R + R R + E I L YL + +V+RD+K N++LD +
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG 188
+ KI+DFG+ + D A GT Y+ PE + Y D + GV++ +++
Sbjct: 143 HIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 189 GK 190
G+
Sbjct: 201 GR 202
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 42 LQHVNLLPVLGICT----QREEKM-LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEG 96
+H N++ + +CT RE K+ L+++++ ++ L Y+ D + T ++
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQ 128
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
+ +GL +L + +VHRDLK NIL+ K++DFG+AR ++ + +V T
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNE 200
Y PE + + Y+ D++S G + ++ +R + G ++
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSD 224
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 14 QEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVN---LLPVLGICTQREEKMLIYDYMP 68
Q++AVK+LSR + E++L L+H N LL V T E+ +Y
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
D ++ + L D + ++ + +GL Y+ + I+HRDLK SN+ ++ +
Sbjct: 114 LMGADLNNI-VKSQALSDEHVQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDS 168
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSYGVLLLQIL 187
+I DFG+AR E TG V T Y PE + + Y+ D++S G ++ ++L
Sbjct: 169 ELRILDFGLAR----QADEEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 188 GGK 190
GK
Sbjct: 224 QGK 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI D G+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDAGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 100/199 (50%), Gaps = 20/199 (10%)
Query: 12 NGQEMAVKRLS-RTSHQGLE-EFENEVKLTARLQ---HVNLLPVLGICT----QREEKM- 61
G+ +A+KR+ +T +G+ EV + L+ H N++ + +CT RE K+
Sbjct: 36 GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 62 LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
L+++++ ++ L Y+ D + T ++ + +GL +L + +VHRDLK N
Sbjct: 96 LVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQN 150
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
IL+ K++DFG+AR ++ + +V T Y PE + + Y+ D++S G
Sbjct: 151 ILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 207
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ ++ +R + G ++
Sbjct: 208 IFAEMF--RRKPLFRGSSD 224
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
E AVK + ++ EE E ++ QH N++ + + + ++ + L
Sbjct: 49 EFAVKIIDKSKRDPTEEIEILLRYG---QHPNIITLKDVYDDGKYVYVVTELXKGGELLD 105
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNIL-LDYEMNP--- 130
I LR+++ + R ++ IT+ + YL +VHRDLK SNIL +D NP
Sbjct: 106 KI--LRQKFFSE-REASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESI 159
Query: 131 KISDFGMARAFTKDECEANTGRIVG---TYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+I DFG A+ + A G + T +V PE + + Y D++S GVLL L
Sbjct: 160 RICDFGFAK-----QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXL 214
Query: 188 GGKRTSCYYGPNES 201
G T GP+++
Sbjct: 215 TG-YTPFANGPDDT 227
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I GL +L + + I++RDLK N+LLD + N +ISD G+A + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
G++ PE + Y D ++ GV L +++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVN--LLPVLGICTQREEKM-LIYDYMP 68
G+ A+K L + +E + V + LQ+ L L Q +++ + +Y
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L F++ R R + R R + E I L YL + +V+RD+K N++LD +
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG 188
+ KI+DFG+ + D A GT Y+ PE + Y D + GV++ +++
Sbjct: 143 HIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 189 GK 190
G+
Sbjct: 201 GR 202
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I GL +L + + I++RDLK N+LLD + N +ISD G+A + + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGT 352
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
G++ PE + Y D ++ GV L +++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I GL +L + + I++RDLK N+LLD + N +ISD G+A + + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGT 352
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
G++ PE + Y D ++ GV L +++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I GL +L + + I++RDLK N+LLD + N +ISD G+A + + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGT 352
Query: 157 YGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
G++ PE + Y D ++ GV L +++ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L+E E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y P + F RR + + H Q +L + +L +++RDLK N+++D
Sbjct: 122 YAPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ K++DFG+A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVN--LLPVLGICTQREEKM-LIYDYMP 68
G+ A+K L + +E + V + LQ+ L L Q +++ + +Y
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
L F++ R R + R R + E I L YL + +V+RD+K N++LD +
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG 188
+ KI+DFG+ + D A GT Y+ PE + Y D + GV++ +++
Sbjct: 143 HIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
Query: 189 GK 190
G+
Sbjct: 201 GR 202
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI D G+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDRGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G +AVK+LSR + E++L ++H N++ +L + T P
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT------------PA 93
Query: 70 KSL----DFYIF------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
+SL D Y+ DL T H+ I Q L L+ + I+HRDLK
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYS 178
SN+ ++ + KI D G+AR T DE TG V T Y PE + + Y+ D++S
Sbjct: 154 SNLAVNEDCELKILDGGLAR-HTDDEM---TG-YVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 179 YGVLLLQILGGK 190
G ++ ++L G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 62 LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
LI +Y+ L L R + T + I+ L +L + I++RDLK N
Sbjct: 98 LILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPEN 151
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
I+L+++ + K++DFG+ + D +T GT Y+ PE + + ++ D +S G
Sbjct: 152 IMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 182 LLLQILGG 189
L+ +L G
Sbjct: 210 LMYDMLTG 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
EV L L+H N++ + I + L+++Y+ +K L Y+ D +++ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGN--IINMHNVKLFL 106
Query: 95 EGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV 154
+ +GL Y ++HRDLK N+L++ K++DFG+ARA K V
Sbjct: 107 FQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARA--KSIPTKTYDNEV 161
Query: 155 GTYGYVPPEYVRKGI-YSMKYDVYSYGVLLLQILGGK 190
T Y PP+ + YS + D++ G + ++ G+
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 44/203 (21%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHV-------------NLLPVLGICTQREEKMLI 63
A+K++ R + + L +EV L A L H N + + ++ +
Sbjct: 35 AIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 64 YDYMPNKSLDFYIFDLRRRYLLD------WRTRVHIIEGITQGLLYLQEYSNLTIVHRDL 117
+Y N++L +DL L+ WR I+E ++ Y+ I+HRDL
Sbjct: 94 MEYCENRTL----YDLIHSENLNQQRDEYWRLFRQILEALS----YIHSQG---IIHRDL 142
Query: 118 KASNILLDYEMNPKISDFGMARAFTKD------------ECEANTGRIVGTYGYVPPEYV 165
K NI +D N KI DFG+A+ + N +GT YV E +
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 166 R-KGIYSMKYDVYSYGVLLLQIL 187
G Y+ K D+YS G++ +++
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y+P + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 122 YVPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ K++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 14 QEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVN---LLPVLGICTQREEKMLIYDYMP 68
Q++AVK+LSR + E++L L+H N LL V T E+ +Y
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
D ++ + L D + ++ + +GL Y+ + I+HRDLK SN+ ++ +
Sbjct: 106 LMGADLNNI-VKCQALSDEHVQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDC 160
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSYGVLLLQIL 187
+I DFG+AR E TG V T Y PE + + Y+ D++S G ++ ++L
Sbjct: 161 ELRILDFGLARQAD----EEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
Query: 188 GGK 190
GK
Sbjct: 216 QGK 218
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L L ++ +HRD+K N+LLD + K++DFG K E VGT Y+
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYI 241
Query: 161 PPEYVRK----GIYSMKYDVYSYGVLLLQILGG 189
PE ++ G Y + D +S GV L ++L G
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ Q+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L L ++ +HRD+K N+LLD + K++DFG K E VGT Y+
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYI 241
Query: 161 PPEYVRK----GIYSMKYDVYSYGVLLLQILGG 189
PE ++ G Y + D +S GV L ++L G
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYV 160
+L L ++ +HRD+K N+LLD + K++DFG K E VGT Y+
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYI 236
Query: 161 PPEYVRK----GIYSMKYDVYSYGVLLLQILGG 189
PE ++ G Y + D +S GV L ++L G
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 32/202 (15%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G+ +A+K++ T +G+ E+ L L H N++ +L + + L+++++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-- 87
Query: 70 KSLDFYIF-----------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
S+D F L + YL + QGL + + ++HRDLK
Sbjct: 88 -SMDLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLK 133
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L++ E K++DFG+ARAF +V + P + YS D++S
Sbjct: 134 PENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWS 192
Query: 179 YGVLLLQILGGKRTSCYYGPNE 200
G + +++ R + + G +E
Sbjct: 193 LGCIFAEMV--TRRALFPGDSE 212
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKD-- 144
WR I+E ++ Y+ I+HRDLK NI +D N KI DFG+A+ +
Sbjct: 119 WRLFRQILEALS----YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 145 ----------ECEANTGRIVGTYGYVPPEYVR-KGIYSMKYDVYSYGVLLLQIL 187
N +GT YV E + G Y+ K D+YS G++ +++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + K++DFG A+ + T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTP 203
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 14 QEMAVKRLSRTSHQGLEEFEN--EVKLTARLQHVN---LLPVLGICTQREEKMLIYDYMP 68
Q++AVK+LSR + E++L L+H N LL V T E+ +Y
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM 128
D ++ + L D + ++ + +GL Y+ + I+HRDLK SN+ ++ +
Sbjct: 114 LMGADLNNI-VKCQALSDEHVQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDS 168
Query: 129 NPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSYGVLLLQIL 187
+I DFG+AR E TG V T Y PE + + Y+ D++S G ++ ++L
Sbjct: 169 ELRILDFGLARQAD----EEMTG-YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 188 GGK 190
GK
Sbjct: 224 QGK 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 32/202 (15%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPN 69
G+ +A+K++ T +G+ E+ L L H N++ +L + + L+++++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-- 85
Query: 70 KSLDFYIF-----------DLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
S+D F L + YL + QGL + + ++HRDLK
Sbjct: 86 -SMDLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLK 131
Query: 119 ASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYS 178
N+L++ E K++DFG+ARAF +V + P + YS D++S
Sbjct: 132 PENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWS 190
Query: 179 YGVLLLQILGGKRTSCYYGPNE 200
G + +++ R + + G +E
Sbjct: 191 LGCIFAEMV--TRRALFPGDSE 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 135
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 136 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 195 IFAEMV--TRRALFPGDSE 211
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYD---- 65
G+ +A+K++ T +G+ E+ L L H N++ +L + + L+++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ 89
Query: 66 ----YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
+M +L L + YL + QGL + + ++HRDLK N
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 136
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 137 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 196 IFAEMV--TRRALFPGDSE 212
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 136
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 137 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 196 IFAEMV--TRRALFPGDSE 212
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPEN 134
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 135 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 194 IFAEMV--TRRALFPGDSE 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 135
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 136 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 195 IFAEMV--TRRALFPGDSE 211
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 134
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 135 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 194 IFAEMV--TRRALFPGDSE 210
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 132
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 133 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 192 IFAEMV--TRRALFPGDSE 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 132
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 133 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 192 IFAEMV--TRRALFPGDSE 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPEN 135
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 136 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 195 IFAEMV--TRRALFPGDSE 211
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 133
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 134 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 193 IFAEMV--TRRALFPGDSE 209
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 136
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 137 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 196 IFAEMV--TRRALFPGDSE 212
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 91 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 137
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 138 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 196
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 197 IFAEMV--TRRALFPGDSE 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 90 DLKTFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 136
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 137 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 196 IFAEMV--TRRALFPGDSE 212
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 12 NGQEMAVKRLS-RTSHQGLEEFE-NEVKLTARLQHVNLLPVLGICTQREEKMLIYDY--- 66
G+ +A+K++ T +G+ E+ L L H N++ +L + + L++++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 67 -----MPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
M +L L + YL + QGL + + ++HRDLK N
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQ----------LLQGLAFCHSHR---VLHRDLKPQN 134
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
+L++ E K++DFG+ARAF +V + P + YS D++S G
Sbjct: 135 LLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 182 LLLQILGGKRTSCYYGPNE 200
+ +++ R + + G +E
Sbjct: 194 IFAEMV--TRRALFPGDSE 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L+E E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y P + F RR + + H Q +L + +L +++RDLK N+++D
Sbjct: 122 YAPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ +++DFG+A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 126 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 126 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNL--LPVLGICTQREEKM-LIYD 65
+ G A+K L + L++ E+ + LQ VN L L + + ++ +
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVME 122
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y P + F RR + + H Q +L + +L +++RDLK N+++D
Sbjct: 123 YAPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ K++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 177 QQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 186 ILGG 189
+ G
Sbjct: 232 MAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 126 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 180 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
E+F +E + L H +++ ++GI + E +I + P L Y+ R + L T
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLT 110
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT-KDECEA 148
V I + + YL+ ++ VHRD+ NIL+ K+ DFG++R +D +A
Sbjct: 111 LVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 167
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESL 202
+ R+ ++ PE + ++ DV+ + V + +IL + ++ N+ +
Sbjct: 168 SVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 219
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+++D + K++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNL--LPVLGICTQREEKM-LIYD 65
+ G A+K L + L++ E+ + LQ VN L L + + ++ +
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVME 122
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y P + F RR + + H Q +L + +L +++RDLK N+++D
Sbjct: 123 YAPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ K++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 177 QQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 186 ILGG 189
+ G
Sbjct: 232 MAAG 235
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
E+F +E + L H +++ ++GI + E +I + P L Y+ R + L T
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLT 126
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT-KDECEA 148
V I + + YL+ ++ VHRD+ NIL+ K+ DFG++R +D +A
Sbjct: 127 LVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 183
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILG-GKRTSCYYGPNESLNLLE 206
+ R+ ++ PE + ++ DV+ + V + +IL GK+ + + + +LE
Sbjct: 184 SVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 240
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+++D + K++DFG A+ + T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+++D + K++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 30 EEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRT 89
E+F +E + L H +++ ++GI + E +I + P L Y+ R + L T
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLT 114
Query: 90 RVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT-KDECEA 148
V I + + YL+ ++ VHRD+ NIL+ K+ DFG++R +D +A
Sbjct: 115 LVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESL 202
+ R+ ++ PE + ++ DV+ + V + +IL + ++ N+ +
Sbjct: 172 SVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 223
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+++D + K++DFG A+ + T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y+P + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 122 YVPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ +++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y+P + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 122 YVPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ +++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 48 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 107
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y+P + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 108 YVPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 161
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ +++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 162 QQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
Query: 186 ILGG 189
+ G
Sbjct: 217 MAAG 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y+P + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 122 YVPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ +++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 176 QQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 186 ILGG 189
+ G
Sbjct: 231 MAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y+P + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 123 YVPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ +++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 177 QQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 186 ILGG 189
+ G
Sbjct: 232 MAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---D 65
+ G A+K L + L++ E+ + LQ VN ++ + ++ +Y +
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
Y+P + F RR + + H Q +L + +L +++RDLK N+L+D
Sbjct: 123 YVPGGEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQ 185
+ +++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ +
Sbjct: 177 QQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 186 ILGG 189
+ G
Sbjct: 232 MAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 119 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 172
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 173 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 62 LIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
LI +Y+ L L R + T + I+ L +L + I++RDLK N
Sbjct: 98 LILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPEN 151
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
I+L+++ + K++DFG+ + D T GT Y+ PE + + ++ D +S G
Sbjct: 152 IMLNHQGHVKLTDFGLCKESIHD--GTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 182 LLLQILGG 189
L+ +L G
Sbjct: 210 LMYDMLTG 217
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 10 LPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQ-HVNLLPVLGICTQREEKMLIYDYMP 68
L QE AVK + + EV++ + Q H N+L ++ + + L+++ M
Sbjct: 35 LITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMR 94
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY-- 126
S+ +I +RR+ + V +++ + L +L N I HRDLK NIL ++
Sbjct: 95 GGSILSHIH--KRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENILCEHPN 148
Query: 127 EMNP-KISDF--GMARAFTKDECEANTGRIV---GTYGYVPPEYV-----RKGIYSMKYD 175
+++P KI DF G D +T ++ G+ Y+ PE V IY + D
Sbjct: 149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 176 VYSYGVLLLQILGG 189
++S GV+L +L G
Sbjct: 209 LWSLGVILYILLSG 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 14 QEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPV--------------LGICTQREE 59
+ +A+K++ T Q ++ E+K+ RL H N++ V +G T+
Sbjct: 37 KRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96
Query: 60 KMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
++ +YM + L + LL+ R+ + + + +GL Y+ + ++HRDLK
Sbjct: 97 VYIVQEYMETDLANV----LEQGPLLEEHARLFMYQ-LLRGLKYIH---SANVLHRDLKP 148
Query: 120 SNILLDYE-MNPKISDFGMARAFTKDECEANTGR----IVGTYGYVPPEYVRKGIYSMKY 174
+N+ ++ E + KI DFG+AR D ++ G +V + P + Y+
Sbjct: 149 ANLFINTEDLVLKIGDFGLARIM--DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI 206
Query: 175 DVYSYGVLLLQILGGKRTSCYYGPNE 200
D+++ G + ++L GK + + G +E
Sbjct: 207 DMWAAGCIFAEMLTGK--TLFAGAHE 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I + +L + L VHRD+K N+LLD + +++DFG D+ + VGT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMN-DDGTVQSSVAVGT 239
Query: 157 YGYVPPEYVRK-----GIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGL 211
Y+ PE ++ G Y + D +S GV + ++L G+ P + +L+E +
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET------PFYAESLVETYGKI 293
Query: 212 WKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ E +F D S A L++ L+C +E
Sbjct: 294 MNHEERFQFPSHVTDVSEEAKDLIQ----RLICSRE 325
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 195
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 127 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 127 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 127 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 181 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
E+ +K L + E F + ++L H +L+ G+C +E +L+ +++ SLD
Sbjct: 42 EVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDT 101
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM-----N 129
Y+ + + W ++ + + + + +L+E T++H ++ A NILL E N
Sbjct: 102 YLKKNKNCINILW--KLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGN 156
Query: 130 P---KISDFGMA-RAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSYGVLLL 184
P K+SD G++ KD + RI +VPPE + ++ D +S+G L
Sbjct: 157 PPFIKLSDPGISITVLPKDILQE---RI----PWVPPECIENPKNLNLATDKWSFGTTLW 209
Query: 185 QILGG 189
+I G
Sbjct: 210 EICSG 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 197
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECE-ANTGRIVGTYGY 159
+L L ++ ++HRD+K N+LLD + K++DFG DE + VGT Y
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGT--CMKMDETGMVHCDTAVGTPDY 241
Query: 160 VPPEYVRK----GIYSMKYDVYSYGVLLLQILGG 189
+ PE ++ G Y + D +S GV L ++L G
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIY---DYMPN 69
G A+K L + L++ E+ + LQ VN ++ + ++ +Y +Y+P
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 146
Query: 70 KSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMN 129
+ F RR + + H Q +L + +L +++RDLK N+L+D +
Sbjct: 147 GEM----FSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 200
Query: 130 PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+++DFG A+ + T + GT Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 201 IQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 110 LTIVHRDLKASNILLDYEMNP--KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRK 167
+ + HRDLK N LLD P KI+DFG ++A + VGT Y+ PE + K
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASV---LHSQPKSAVGTPAYIAPEVLLK 190
Query: 168 GIYSMKY-DVYSYGVLLLQILGGKRTSCYYGPNESLNL 204
Y K DV+S GV L +L G + P E N
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG--AYPFEDPEEPKNF 226
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGT 156
I + +L + L VHRD+K N+LLD + +++DFG D+ + VGT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMN-DDGTVQSSVAVGT 255
Query: 157 YGYVPPEYVRK-----GIYSMKYDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGL 211
Y+ PE ++ G Y + D +S GV + ++L G+ P + +L+E +
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET------PFYAESLVETYGKI 309
Query: 212 WKNGEGMEFIDSSLDDSSSAWKLMRCMQVALLCVQE 247
+ E +F D S A L++ L+C +E
Sbjct: 310 MNHEERFQFPSHVTDVSEEAKDLIQ----RLICSRE 341
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 223
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 135 AQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTP 189
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L+ ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY- 190
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y PE + Y D++S GV++ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L+ ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY- 190
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y PE + Y D++S GV++ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+++ +L+H NL+ +L + ++ L+++Y + L + D +R + + H++
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPE-----HLV 104
Query: 95 EGIT-QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRI 153
+ IT Q L + +HRD+K NIL+ K+ DFG AR T +
Sbjct: 105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE-- 162
Query: 154 VGTYGYVPPE-YVRKGIYSMKYDVYSYGVLLLQILGG 189
V T Y PE V Y DV++ G + ++L G
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGI-CTQREEKM---LIYDYMP 68
G+ +AVK S + E E+ T L+H N+L + T R LI Y
Sbjct: 60 GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 118
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKASNIL 123
SL +D + LD + + I+ I GL +L I HRDLK+ NIL
Sbjct: 119 MGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL 174
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGR--IVGTYGYVPPEYVRKGIYS------MKYD 175
+ I+D G+A ++ + + G VGT Y+ PE + + I + D
Sbjct: 175 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVD 234
Query: 176 VYSYGVLLLQI 186
++++G++L ++
Sbjct: 235 IWAFGLVLWEV 245
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTP 223
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 10 LPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGI-CTQREEK---MLIYD 65
L +G+ +AVK S Q E E+ T L+H N+L + T R LI
Sbjct: 28 LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITH 86
Query: 66 YMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKAS 120
Y + SL +D +R L+ + + GL +L I HRD K+
Sbjct: 87 YHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 121 NILLDYEMNPKISDFGMARAFTK--DECEANTGRIVGTYGYVPPEYVRKGIY-----SMK 173
N+L+ + I+D G+A ++ D + VGT Y+ PE + + I S K
Sbjct: 143 NVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYK 202
Query: 174 Y-DVYSYGVLLLQILGGKRT 192
+ D++++G++L +I +RT
Sbjct: 203 WTDIWAFGLVLWEI--ARRT 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGI-CTQREEK---MLIYDYMP 68
G+ +AVK S + E E+ T L+H N+L + T R LI Y
Sbjct: 31 GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKASNIL 123
SL +D + LD + + I+ I GL +L I HRDLK+ NIL
Sbjct: 90 MGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL 145
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGR--IVGTYGYVPPEYVRKGIYS------MKYD 175
+ I+D G+A ++ + + G VGT Y+ PE + + I + D
Sbjct: 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVD 205
Query: 176 VYSYGVLLLQI 186
++++G++L ++
Sbjct: 206 IWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGI-CTQREEK---MLIYDYMP 68
G+ +AVK S + E E+ T L+H N+L + T R LI Y
Sbjct: 31 GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQ-----EYSNLTIVHRDLKASNIL 123
SL +D + LD + + I+ I GL +L I HRDLK+ NIL
Sbjct: 90 MGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL 145
Query: 124 LDYEMNPKISDFGMARAFTKDECEANTGR--IVGTYGYVPPEYVRKGIYS------MKYD 175
+ I+D G+A ++ + + G VGT Y+ PE + + I + D
Sbjct: 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVD 205
Query: 176 VYSYGVLLLQI 186
++++G++L ++
Sbjct: 206 IWAFGLVLWEV 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+++D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 29 LEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRR------- 81
+E+ E+ + +L H N++ ++ + PN+ + +F+L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDD-----------PNEDHLYMVFELVNQGPVMEV 128
Query: 82 ---RYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMA 138
+ L + + R + + + +G+ YL I+HRD+K SN+L+ + + KI+DFG++
Sbjct: 129 PTLKPLSEDQARFYF-QDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 139 RAFT-KDECEANTGRIVGTYGYVPPEYV---RKGIYSMKYDVYSYGVLLLQILGGK 190
F D +NT VGT ++ PE + RK DV++ GV L + G+
Sbjct: 185 NEFKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 15 EMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDF 74
E+ +K L + E F + ++L H +L+ G+C +E +L+ +++ SLD
Sbjct: 42 EVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDT 101
Query: 75 YIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM-----N 129
Y+ + + W ++ + + + + +L+E T++H ++ A NILL E N
Sbjct: 102 YLKKNKNCINILW--KLEVAKQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGN 156
Query: 130 P---KISDFGMA-RAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVYSYGVLLL 184
P K+SD G++ KD + RI +VPPE + ++ D +S+G L
Sbjct: 157 PPFIKLSDPGISITVLPKDILQE---RI----PWVPPECIENPKNLNLATDKWSFGTTLW 209
Query: 185 QILGG 189
+I G
Sbjct: 210 EICSG 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 52 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 107
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
Y LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 108 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 163
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 164 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 20/114 (17%)
Query: 87 WRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKD-- 144
WR I+E ++ Y+ I+HR+LK NI +D N KI DFG+A+ +
Sbjct: 119 WRLFRQILEALS----YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 145 ----------ECEANTGRIVGTYGYVPPEYVR-KGIYSMKYDVYSYGVLLLQIL 187
N +GT YV E + G Y+ K D YS G++ + +
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 53 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 108
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
Y LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 109 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 164
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 165 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 55 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 110
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
Y LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 111 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 166
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 167 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+++D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 105
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
Y LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 106 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 161
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 162 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 78 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 133
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
Y LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 134 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 189
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 190 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
EV L LQH N++ + + LI++Y N DL++ + + +I
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN--------DLKKYMDKNPDVSMRVI 134
Query: 95 EGITQGLLYLQEY-SNLTIVHRDLKASNILL---DYEMNP--KISDFGMARAFTKDECEA 148
+ L+ + + +HRDLK N+LL D P KI DFG+ARAF
Sbjct: 135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQ 193
Query: 149 NTGRIVGTYGYVPPEYVRKG-IYSMKYDVYSYGVLLLQILGGKRTSCYYGPNE 200
T I+ T Y PPE + YS D++S + ++L +T + G +E
Sbjct: 194 FTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML--MKTPLFPGDSE 243
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 47 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 102
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
Y LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 103 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 158
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 159 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 105
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
Y LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 106 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 161
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 162 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 13 GQEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQR------EEKMLIY 64
G +AVK+LSR + + E+ L + H N++ +L + T + ++ L+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 65 DYMPNKSLDFYIFDL---RRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
+ M +L R YLL Q L ++ + I+HRDLK SN
Sbjct: 109 ELMDANLCQVIHMELDHERMSYLL------------YQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
I++ + KI DFG+AR + T +V Y Y PE + Y+ D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRY-YRAPEVILGMGYAANVDIWSVGC 213
Query: 182 LLLQILGG 189
++ +++ G
Sbjct: 214 IMGELVKG 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 105
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
+ LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 106 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 161
Query: 143 KDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D + ++ PE + ++ DV+ +GV + +IL
Sbjct: 162 EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 33 ENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFD--LRRRYLLDWRTR 90
+NE+ + +L H L+ + + E +LI +++ L FD Y +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEV 151
Query: 91 VHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEM--NPKISDFGMARAFTKDECEA 148
++ + +GL ++ E+S IVH D+K NI+ + + + KI DFG+A DE
Sbjct: 152 INYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208
Query: 149 NTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
T T + PE V + D+++ GVL +L G
Sbjct: 209 VT---TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 78 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 133 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 184
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 241
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 242 SAGCVLAELLLGQ 254
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 91 VHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD--YEM-NPKISDFGMARAFTKDECE 147
+ +I+ I +G+ YL + + IVH DLK NILL Y + + KI DFGM+R CE
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH-ACE 189
Query: 148 ANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKRTSCYYG 197
I+GT Y+ PE + + D+++ G++ +L TS + G
Sbjct: 190 LR--EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL--THTSPFVG 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ QG + F+N E+++ +L H N++ + EK L+
Sbjct: 44 SGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 99 DYVPAT-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 150
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 207
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSRT--SHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 212 GCIMGEMIKG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 109 NLTIVHRDLKASNILLDYEMNP--KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVR 166
++ I HRDLK N LLD P KI DFG +++ +T VGT Y+ PE +
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLL 190
Query: 167 KGIYSMKY-DVYSYGVLLLQILGG 189
+ Y K DV+S GV L +L G
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y+ P + Y+ D ++ GVL+ ++ G
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN--TGRIV 154
+ +GL Y+ + ++HRDLK SN+L++ KI DFGMAR E V
Sbjct: 168 LLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 155 GTYGYVPPEYVRK-GIYSMKYDVYSYGVLLLQILGGKRTSCYYGPN 199
T Y PE + Y+ D++S G + ++L R + G N
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA--RRQLFPGKN 268
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 56 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 110
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 111 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 162
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 219
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 220 SAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 52 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 106
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 107 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 158
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 159 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 215
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 216 SAGCVLAELLLGQ 228
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L+ ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY- 190
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
Y PE + Y D++S G ++ +++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 63 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 117
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 118 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 169
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 170 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 226
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 227 SAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 56 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 110
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 111 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 162
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 219
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 220 SAGCVLAELLLGQ 232
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 97 ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEAN--TGRIV 154
+ +GL Y+ + ++HRDLK SN+L++ KI DFGMAR E V
Sbjct: 167 LLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 155 GTYGYVPPEYVRK-GIYSMKYDVYSYGVLLLQILGGKRTSCYYGPN 199
T Y PE + Y+ D++S G + ++L R + G N
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA--RRQLFPGKN 267
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 110 LTIVHRDLKASNILLDYEMNP--KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRK 167
+ + HRDLK N LLD P KI DFG +++ +T VGT Y+ PE + K
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLK 189
Query: 168 GIYSMKY-DVYSYGVLLLQILGG 189
Y K DV+S GV L +L G
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVG 212
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ QG + F+N E+++ +L H N++ + EK L+
Sbjct: 44 SGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 99 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 150
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 207
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVL 98
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 99 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 150
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 207
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 99 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 150
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 207
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 99 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 150
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 207
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ QG + F+N E+++ +L H N++ + EK L+
Sbjct: 44 SGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 99 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 150
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 207
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 13 GQEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQR------EEKMLIY 64
G +AVK+LSR + + E+ L + H N++ +L + T + ++ L+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 65 DYMPNKSLDFYIFDL---RRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASN 121
+ M +L R YLL Q L ++ + I+HRDLK SN
Sbjct: 107 ELMDANLCQVIHMELDHERMSYLL------------YQMLCGIKHLHSAGIIHRDLKPSN 154
Query: 122 ILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGV 181
I++ + KI DFG+AR T T +V Y Y PE + Y D++S G
Sbjct: 155 IVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGC 211
Query: 182 LLLQILGG 189
++ +++ G
Sbjct: 212 IMGELVKG 219
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 9 RLPNGQEMAVKRLSRTSHQGLEEFENEV----------KLTARLQHVNLLPVLGICTQRE 58
RL + ++A+K + R G + V K+ A H ++ +L +E
Sbjct: 52 RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE 111
Query: 59 EKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLK 118
ML+ + P + D + + + L + +R Q + +Q + +VHRD+K
Sbjct: 112 GFMLVLE-RPLPAQDLFDYITEKGPLGEGPSRCFF----GQVVAAIQHCHSRGVVHRDIK 166
Query: 119 ASNILLDYEMN-PKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV-RKGIYSMKYDV 176
NIL+D K+ DFG A DE + GT Y PPE++ R +++ V
Sbjct: 167 DENILIDLRRGCAKLIDFGSG-ALLHDEPYTD---FDGTRVYSPPEWISRHQYHALPATV 222
Query: 177 YSYGVLLLQILGG 189
+S G+LL ++ G
Sbjct: 223 WSLGILLYDMVCG 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 109 NLTIVHRDLKASNILLDYE---MNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYV 165
++ +VHRDLK N+L E + KI DFG AR D T T Y PE +
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELL 181
Query: 166 RKGIYSMKYDVYSYGVLLLQILGGK 190
+ Y D++S GV+L +L G+
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 48 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 102
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 103 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 154
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 155 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 211
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 212 SAGCVLAELLLGQ 224
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 5 ICQGRLPNGQEMAVK--RLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQ--REEK 60
+ +GR G ++ VK ++ S + +F E H N+LPVLG C
Sbjct: 26 LWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP 84
Query: 61 MLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKAS 120
LI +MP SL + + +++D V + +G+ +L L H L +
Sbjct: 85 TLITHWMPYGSL-YNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSR 142
Query: 121 NILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRK---GIYSMKYDVY 177
++++D +M +IS + +F + GR+ +V PE ++K D++
Sbjct: 143 SVMIDEDMTARISMADVKFSFQ------SPGRMYAP-AWVAPEALQKKPEDTNRRSADMW 195
Query: 178 SYGVLLLQIL 187
S+ VLL +++
Sbjct: 196 SFAVLLWELV 205
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 45 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 99
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 100 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 151
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 152 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIFGATDYTSSIDVW 208
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 209 SAGCVLAELLLGQ 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 72 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 126
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 127 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 178
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 179 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 235
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 236 SAGCVLAELLLGQ 248
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 110 LTIVHRDLKASNILLDYEMNP--KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRK 167
+ + HRDLK N LLD P KI DFG +++ +T VGT Y+ PE + K
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLK 190
Query: 168 GIYSMKY-DVYSYGVLLLQILGG 189
Y K DV+S GV L +L G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 111 TIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKG-I 169
++HRDLK N+L++ K++DFG+ARAF + +V T Y PP+ + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 170 YSMKYDVYSYGVLLLQILGGKR 191
YS D++S G + ++ R
Sbjct: 179 YSTSIDMWSAGCIFAELANAAR 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 105
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
+ LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 106 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YM 161
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 162 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 78 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 133 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 184
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 241
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 242 SAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 80 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 134
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 135 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 186
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 187 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 243
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 244 SAGCVLAELLLGQ 256
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 212 GCIMGEMIKG 221
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 49 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 103
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 104 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 155
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 156 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 212
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 213 SAGCVLAELLLGQ 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
A K++ + + ++ F+ E+++ L H N++ + + L+ + L +
Sbjct: 38 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 97
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL--DYEMNP-KIS 133
R + I++ + + Y + L + HRDLK N L D +P K+
Sbjct: 98 VHKR---VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLI 151
Query: 134 DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
DFG+A F + VGT YV P+ V +G+Y + D +S GV++ +L G
Sbjct: 152 DFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 82 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 136
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 137 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 188
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 189 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 245
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 246 SAGCVLAELLLGQ 258
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 98
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 99 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 155
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 156 SNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSV 212
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 213 GCIMGEMIKG 222
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 123 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 177
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 178 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 229
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 230 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 286
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 287 SAGCVLAELLLGQ 299
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 57 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 111
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 112 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 163
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 164 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 220
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 221 SAGCVLAELLLGQ 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 17 AVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYI 76
A K++ + + ++ F+ E+++ L H N++ + + L+ + L +
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 114
Query: 77 FDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILL--DYEMNP-KIS 133
R + I++ + + Y + L + HRDLK N L D +P K+
Sbjct: 115 VHKR---VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLI 168
Query: 134 DFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
DFG+A F + VGT YV P+ V +G+Y + D +S GV++ +L G
Sbjct: 169 DFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 212 GCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 212 GCIMGEMIKG 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 12 NGQEMAVKRLSRTSHQGLEEFEN-EVKLTARLQHVNLLPVLGICTQREEKM------LIY 64
+G+ +A+K++ + + F+N E+++ +L H N++ + EK L+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 65 DYMPNKSLDFYIFDLRRRYLLDWRTRVHI-----IEGITQGLLYLQEYSNLTIVHRDLKA 119
DY+P ++ + R Y +T I + + + L Y+ + I HRD+K
Sbjct: 99 DYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKP 150
Query: 120 SNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGI-YSMKYDVY 177
N+LLD + K+ DFG A+ + E N I Y Y PE + Y+ DV+
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 207
Query: 178 SYGVLLLQILGGK 190
S G +L ++L G+
Sbjct: 208 SAGCVLAELLLGQ 220
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 212 GCIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 98 TQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTY 157
Q +L + +L +++RDLK N+L+D + +++DFG A+ + T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 158 GYVPPEYVRKGIYSMKYDVYSYGVLLLQILGG 189
+ PE + Y+ D ++ GVL+ ++ G
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD-YMPNK 70
+ +A+K+LSR + + E+ L + H N++ +L + T ++ D Y+ +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+D + + + L D +++ + G+ +L + I+HRDLK SNI++ +
Sbjct: 110 LMDANLXQVIQMEL-DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
KI DFG+AR T T +V Y Y PE + Y D++S G ++ +++ K
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 485
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
+ LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YM 541
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 542 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 24 TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL-DFYIFDLRRR 82
TS E+F E + H +++ ++G+ T+ ++ M +L + F R+
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRK 485
Query: 83 YLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFT 142
+ LD + + ++ L YL+ + VHRD+ A N+L+ K+ DFG++R +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YM 541
Query: 143 KDEC--EANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQIL 187
+D +A+ G++ ++ PE + ++ DV+ +GV + +IL
Sbjct: 542 EDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 212 GCIMGEMIKG 221
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 51/272 (18%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLR 80
+ R + L+ F+ EV + +H N++ +G C +I ++L + D
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA- 123
Query: 81 RRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPK--ISDFG-- 136
+ +LD I + I +G+ YL I+H+DLK+ N+ D N K I+DFG
Sbjct: 124 -KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD---NGKVVITDFGLF 176
Query: 137 -----MARAFTKDECEANTGRIVGTYGYVPPEYVR---------KGIYSMKYDVYSYGVL 182
+ +D+ G + ++ PE +R K +S DV++ G +
Sbjct: 177 SISGVLQAGRREDKLRIQNGWLC----HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTI 232
Query: 183 LLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGEGMEFIDSSLDDSSSAWKLMRCMQVAL 242
+ L + P E++ +W+ G GM+ S + + L
Sbjct: 233 WYE-LHAREWPFKTQPAEAI--------IWQMGTGMKPNLSQIGMGKE------ISDILL 277
Query: 243 LCVQENAADRPTMLEILVMLKSETADIKTPKK 274
C +RPT +++ ML+ K PK+
Sbjct: 278 FCWAFEQEERPTFTKLMDMLE------KLPKR 303
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+ + +R++H N++ VL I + L+ + LD + F + R LD +I
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAF-IDRHPRLDEPLASYIF 136
Query: 95 EGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV 154
+ + YL+ I+HRD+K NI++ + K+ DFG A + +
Sbjct: 137 RQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FC 190
Query: 155 GTYGYVPPEYVRKGIY-SMKYDVYSYGVLLLQILGGKRTSC 194
GT Y PE + Y + +++S GV L ++ + C
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 36/181 (19%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD---GTR 173
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 218
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 219 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
Query: 270 K 270
Sbjct: 271 H 271
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD---GTR 220
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 265
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 266 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 317
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD---GTR 176
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 221
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 222 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 273
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 177
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 222
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 223 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 274
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 36/181 (19%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD---GTR 173
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 218
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 219 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
Query: 270 K 270
Sbjct: 271 H 271
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 177
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 222
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 223 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 274
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 178
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 223
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 224 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 275
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 178
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 223
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 224 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 275
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 205
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 250
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 251 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 192
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 237
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 238 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 289
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 192
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 237
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 238 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 289
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 193
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 238
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 239 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 290
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 193
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 238
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 239 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 290
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD-YMPNK 70
+ +A+K+LSR + + E+ L + H N++ +L + T ++ D Y+ +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+D + + + L D +++ + G+ +L + I+HRDLK SNI++ +
Sbjct: 110 LMDANLXQVIQMEL-DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
KI DFG+AR T T +V Y Y PE + Y D++S G ++ +++ K
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 220
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 265
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 266 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 317
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 225
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 270
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 271 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 322
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 200
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 245
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 246 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 297
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 220
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 265
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 266 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 317
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 178
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 223
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 224 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 275
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 212
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 257
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 258 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 309
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD-YMPNK 70
+ +A+K+LSR + + E+ L + H N++ +L + T ++ D Y+ +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+D + + + L D +++ + G+ +L + I+HRDLK SNI++ +
Sbjct: 110 LMDANLXQVIQMEL-DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
KI DFG+AR T T +V Y Y PE + Y D++S G ++ +++ K
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 137
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 138 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 193
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VGT Y+PPE ++ S + DV+S
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 254 GCILYYMTYGK 264
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 32/191 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P K+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT------------PQKT 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGGK 190
G ++ +++ K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD-YMPNK 70
+ +A+K+LSR + + E+ L + H N++ +L + T ++ D Y+ +
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+D + + + L D +++ + G+ +L + I+HRDLK SNI++ +
Sbjct: 103 LMDANLXQVIQMEL-DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 158
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
KI DFG+AR T T +V Y Y PE + Y D++S G ++ +++ K
Sbjct: 159 KILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 46 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 93
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 94 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 149
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VGT Y+PPE ++ S + DV+S
Sbjct: 150 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 209
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 210 GCILYYMTYGK 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 113 VHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSM 172
HRD+K NIL+ + + DFG+A A T DE G VGT Y PE + +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASA-TTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 173 KYDVYSYGVLLLQILGGK 190
+ D+Y+ +L + L G
Sbjct: 215 RADIYALTCVLYECLTGS 232
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 36/181 (19%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFD---GTR 173
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 218
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 219 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
Query: 270 K 270
Sbjct: 271 H 271
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 206
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 251
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 252 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 205
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 250
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 251 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 205
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 250
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 251 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 205
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 250
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 251 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 206
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 251
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 252 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 206
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 251
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 252 GQVFFRQRVSSE--------CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 206
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + E G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---------DIPFEHDEEIIG------ 251
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ +DRPT EI V+L ETA+I
Sbjct: 252 GQVFFRQRVS--------XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD-YMPNK 70
+ +A+K+LSR + + E+ L + H N++ +L + T ++ D Y+ +
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+D + + + L D +++ + G+ +L + I+HRDLK SNI++ +
Sbjct: 148 LMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 203
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
KI DFG+AR T T +V Y Y PE + Y D++S G ++ +++ K
Sbjct: 204 KILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 42 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 89
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 90 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 145
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VGT Y+PPE ++ S + DV+S
Sbjct: 146 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 205
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 206 GCILYYMTYGK 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 28 GLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDW 87
G + E++L RL+H N++ ++ + EEK +Y M ++ + ++
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYN-EEKQKMYMVM-----EYCVCGMQEMLDSVP 102
Query: 88 RTRVHIIEG------ITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAF 141
R + + + GL YL IVH+D+K N+LL KIS G+A A
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
Query: 142 TKDECEANTGRIVGTYGYVPPEYVRKGI---YSMKYDVYSYGVLLLQILGG 189
+ G+ + PPE + G+ K D++S GV L I G
Sbjct: 160 HPFAADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 109
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 110 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 165
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VGT Y+PPE ++ S + DV+S
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 226 GCILYYMTYGK 236
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 111 TIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKG-I 169
++HRDLK N+L++ K+++FG+ARAF + +V T Y PP+ + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 170 YSMKYDVYSYGVLLLQILGGKR 191
YS D++S G + ++ R
Sbjct: 179 YSTSIDMWSAGCIFAELANAGR 200
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-KISDFGMARAFTKDECEANTGRIVGTY 157
Q L ++ N ++HRD+K NIL+D K+ DFG A KD + GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTD---FDGTR 193
Query: 158 GYVPPEYVRKGIYSMK-YDVYSYGVLLLQILGGKRTSCYYGPNESLNLLEYAYGLWKNGE 216
Y PPE++R Y + V+S G+LL ++ G + +E +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG---DIPFEHDEEII------------R 238
Query: 217 GMEFIDSSLDDSSSAWKLMRCMQVALLCVQENAADRPTMLEIL-------VMLKSETADI 269
G F + C + C+ DRPT EI V+L ETA+I
Sbjct: 239 GQVFFRQRVS--------XECQHLIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQETAEI 290
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 43 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 90
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 91 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 146
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VGT Y+PPE ++ S + DV+S
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 207 GCILYYMTYGK 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 137
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 138 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 193
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VGT Y+PPE ++ S + DV+S
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 254 GCILYYMTYGK 264
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVHII 94
E+ + RL H +++ VL I ++ + Y+ L+ D ++ + RT V++
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV---VLEIADSDFKKLF----RTPVYLT 154
Query: 95 EGITQGLLY-----LQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARA--------- 140
E + LLY ++ + I+HRDLK +N L++ + + K+ DFG+AR
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNS 214
Query: 141 -----------------FTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLL 183
TK+ TG +V + P + + Y+ DV+S G +
Sbjct: 215 QLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIF 274
Query: 184 LQILGGKRTSCYY 196
++L + + Y
Sbjct: 275 AELLNMIKENVAY 287
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYD-YMPNK 70
+ +A+K+LSR + + E+ L + H N++ +L + T ++ D Y+ +
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 71 SLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
+D + + + L D +++ + G+ +L + I+HRDLK SNI++ +
Sbjct: 148 LMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 203
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
KI DFG+AR T T +V Y Y PE + Y D++S G ++ +++ K
Sbjct: 204 KILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 32/190 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 52 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 99
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 100 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 156
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T +V Y Y PE + Y D++S
Sbjct: 157 SNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSV 213
Query: 180 GVLLLQILGG 189
G ++ +++ G
Sbjct: 214 GCIMGEMIKG 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 184
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 191
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 184
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 191
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 189
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 183
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 190
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYG 158
Q L ++ + I+HRDLK SNI++ + KI DFG+AR T T +V Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY- 190
Query: 159 YVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
Y PE + Y D++S G ++ +++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 110 LTIVHRDLKASNILLDYEMNP--KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRK 167
+ + HRDLK N LLD P KI FG +++ +T VGT Y+ PE + K
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPEVLLK 190
Query: 168 GIYSMKY-DVYSYGVLLLQILGG 189
Y K DV+S GV L +L G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 32/191 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 102
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 103 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 159
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 160 SNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSV 216
Query: 180 GVLLLQILGGK 190
G ++ +++ K
Sbjct: 217 GCIMGEMVCHK 227
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 109
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 110 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 165
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VGT Y+PPE ++ S + DV+S
Sbjct: 166 KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 226 GCILYYMTYGK 236
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 20/194 (10%)
Query: 10 LPNGQEMAVKRLSRTSHQGLEEFENEVKLTARLQ-HVNLLPVLGICTQREEKMLIYDYMP 68
L NG+E AVK + + + EV+ + Q + N+L ++ L+++ +
Sbjct: 35 LQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQ 94
Query: 69 NKSLDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY-- 126
S+ + ++++ + R ++ + L +L I HRDLK NIL +
Sbjct: 95 GGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IAHRDLKPENILCESPE 148
Query: 127 EMNP-KISDFGMARAFT-KDECEANT----GRIVGTYGYVPPEYV-----RKGIYSMKYD 175
+++P KI DF + + C T G+ Y+ PE V + Y + D
Sbjct: 149 KVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCD 208
Query: 176 VYSYGVLLLQILGG 189
++S GV+L +L G
Sbjct: 209 LWSLGVVLYIMLSG 222
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEANTGR-IV 154
Q LL +Q I+HRDLK N+LL + KI+DFG ++ E + R +
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLC 177
Query: 155 GTYGYVPPEY---VRKGIYSMKYDVYSYGVLLLQILGG 189
GT Y+ PE V Y+ D +S GV+L L G
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 110 LTIVHRDLKASNILLDYEMNP--KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRK 167
+ + HRDLK N LLD P KI FG +++ +T VGT Y+ PE + K
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEVLLK 190
Query: 168 GIYSMKY-DVYSYGVLLLQILGG 189
Y K DV+S GV L +L G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 32/191 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 91
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 92 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 148
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T T +V Y Y PE + Y D++S
Sbjct: 149 SNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSV 205
Query: 180 GVLLLQILGGK 190
G ++ +++ K
Sbjct: 206 GCIMGEMVCHK 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEANTGR-IV 154
Q LL +Q I+HRDLK N+LL + KI+DFG ++ E + R +
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLC 176
Query: 155 GTYGYVPPEY---VRKGIYSMKYDVYSYGVLLLQILGG 189
GT Y+ PE V Y+ D +S GV+L L G
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 91 VHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDY-----EMNPKISDFGMAR--AFTK 143
+ +++ T GL +L +L IVHRDLK NIL+ ++ ISDFG+ + A +
Sbjct: 121 ITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 144 DECEANTGRIVGTYGYVPPEYVRKGIY---SMKYDVYSYGVLLLQIL 187
+G + GT G++ PE + + + D++S G + ++
Sbjct: 178 HSFSRRSG-VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEANTGR-IV 154
Q LL +Q I+HRDLK N+LL + KI+DFG ++ E + R +
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLC 177
Query: 155 GTYGYVPPEY---VRKGIYSMKYDVYSYGVLLLQILGG 189
GT Y+ PE V Y+ D +S GV+L L G
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEANTGR-IV 154
Q LL +Q I+HRDLK N+LL + KI+DFG ++ E + R +
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLC 177
Query: 155 GTYGYVPPEY---VRKGIYSMKYDVYSYGVLLLQILGG 189
GT Y+ PE V Y+ D +S GV+L L G
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEANTGR-IV 154
Q LL +Q I+HRDLK N+LL + KI+DFG ++ E + R +
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLC 183
Query: 155 GTYGYVPPEY---VRKGIYSMKYDVYSYGVLLLQILGG 189
GT Y+ PE V Y+ D +S GV+L L G
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 35 EVKLTARLQHVNLLPVLGICTQREEK--MLIYDYMPNKSLDFYIFDLRRRYLLDWRTRVH 92
E+ L L+H N++ + + ++ L++DY + ++I R + + V
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDL--WHIIKFHRASKAN-KKPVQ 124
Query: 93 IIEGITQGLLY-----LQEYSNLTIVHRDLKASNILLDYEMNP-----KISDFGMARAFT 142
+ G+ + LLY + ++HRDLK +NIL+ E P KI+D G AR F
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGE-GPERGRVKIADMGFARLFN 183
Query: 143 KD-ECEANTGRIVGTYGYVPPEYVRKG-IYSMKYDVYSYGVLLLQIL 187
+ A+ +V T+ Y PE + Y+ D+++ G + ++L
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEANTGR-IV 154
Q LL +Q I+HRDLK N+LL + KI+DFG ++ E + R +
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLC 302
Query: 155 GTYGYVPPEY---VRKGIYSMKYDVYSYGVLLLQILGG 189
GT Y+ PE V Y+ D +S GV+L L G
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYEMNP---KISDFGMARAFTKDECEANTGR-IV 154
Q LL +Q I+HRDLK N+LL + KI+DFG ++ E + R +
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRTLC 316
Query: 155 GTYGYVPPEY---VRKGIYSMKYDVYSYGVLLLQILGG 189
GT Y+ PE V Y+ D +S GV+L L G
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 32/191 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSV 211
Query: 180 GVLLLQILGGK 190
G ++ +++ K
Sbjct: 212 GCIMGEMVCHK 222
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 12/194 (6%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
G A K + E E++ + L+H L+ + E ++IY++M L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-- 130
+ D + D V + + +GL ++ E + VH DLK NI+ + +
Sbjct: 242 FEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNEL 296
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
K+ DFG+ + T GT + PE D++S GVL +L G
Sbjct: 297 KLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG- 352
Query: 191 RTSCYYGPNESLNL 204
S + G N+ L
Sbjct: 353 -LSPFGGENDDETL 365
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 37/191 (19%)
Query: 21 LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKML-IYDYMPNKSLDFYIFD- 78
L +Q L+ + NE+ +LQ Q +K++ +YDY + + +
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQ------------QHSDKIIRLYDYEITDQYIYMVMEC 137
Query: 79 --------LRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP 130
L+++ +D R + + + + + ++ IVH DLK +N L+ M
Sbjct: 138 GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-L 193
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMK-----------YDVYSY 179
K+ DFG+A D VG Y+PPE ++ S + DV+S
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 180 GVLLLQILGGK 190
G +L + GK
Sbjct: 254 GCILYYMTYGK 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 12/194 (6%)
Query: 13 GQEMAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKSL 72
G A K + E E++ + L+H L+ + E ++IY++M L
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
Query: 73 DFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKASNILLDYEMNP-- 130
+ D + D V + + +GL ++ E + VH DLK NI+ + +
Sbjct: 136 FEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNEL 190
Query: 131 KISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGK 190
K+ DFG+ + T GT + PE D++S GVL +L G
Sbjct: 191 KLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG- 246
Query: 191 RTSCYYGPNESLNL 204
S + G N+ L
Sbjct: 247 -LSPFGGENDDETL 259
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 32/191 (16%)
Query: 14 QEMAVKRLSR--TSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMPNKS 71
+ +A+K+LSR + + E+ L + H N++ +L + T P KS
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT------------PQKS 97
Query: 72 LD-----FYIFDLRRRYL-------LDWRTRVHIIEGITQGLLYLQEYSNLTIVHRDLKA 119
L+ + + +L L LD +++ + G+ +L + I+HRDLK
Sbjct: 98 LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 120 SNILLDYEMNPKISDFGMARAFTKDECEANTGRIVGTYGYVPPEYVRKGIYSMKYDVYSY 179
SNI++ + KI DFG+AR T +V Y Y PE + Y D++S
Sbjct: 155 SNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSV 211
Query: 180 GVLLLQILGGK 190
G ++ +++ K
Sbjct: 212 GCIMGEMVCHK 222
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 25/195 (12%)
Query: 11 PNGQEMAVKR--LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
P G+ + V+R L S++ + + E+ ++ H N++P E ++ +M
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 69 NKSLDFYIFDLRRRYLLDWRTRV---HIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
S DL + +D + +I++G+ + L Y+ ++ VHR +KAS+IL+
Sbjct: 94 YGSAK----DLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILIS 146
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTY--------GYVPPEYVRKGI--YSMKYD 175
+ +S R+ R+V + ++ PE +++ + Y K D
Sbjct: 147 VDGKVYLSGL---RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSD 203
Query: 176 VYSYGVLLLQILGGK 190
+YS G+ ++ G
Sbjct: 204 IYSVGITACELANGH 218
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 25/195 (12%)
Query: 11 PNGQEMAVKR--LSRTSHQGLEEFENEVKLTARLQHVNLLPVLGICTQREEKMLIYDYMP 68
P G+ + V+R L S++ + + E+ ++ H N++P E ++ +M
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 69 NKSLDFYIFDLRRRYLLDWRTRV---HIIEGITQGLLYLQEYSNLTIVHRDLKASNILLD 125
S DL + +D + +I++G+ + L Y+ ++ VHR +KAS+IL+
Sbjct: 110 YGSAK----DLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILIS 162
Query: 126 YEMNPKISDFGMARAFTKDECEANTGRIVGTY--------GYVPPEYVRKGI--YSMKYD 175
+ +S R+ R+V + ++ PE +++ + Y K D
Sbjct: 163 VDGKVYLSGL---RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSD 219
Query: 176 VYSYGVLLLQILGGK 190
+YS G+ ++ G
Sbjct: 220 IYSVGITACELANGH 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 62/230 (26%)
Query: 2 SVAICQGRLPNGQE--MAVKRLSRTSHQGLEEFENEVKLTARLQHVNLLP----VLGI-- 53
SV + +L G E +A+K L TSH +++ A LQ + + V+G+
Sbjct: 36 SVYLATAQLQVGPEEKIALKHLIPTSH--------PIRIAAELQCLTVAGGQDNVMGVKY 87
Query: 54 CTQREEKMLI-YDYMPNKS----LDFYIFDLRRRYLLDWRTRVHIIEGITQGLLYLQEYS 108
C ++ + ++I Y+ ++S L+ F R Y+L+ L+
Sbjct: 88 CFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNL-------------FKALKRIH 134
Query: 109 NLTIVHRDLKASNILLDYEMNP-KISDFGMARA----------FTKDE-----CEANTGR 152
IVHRD+K SN L + + + DFG+A+ F + E C N
Sbjct: 135 QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCS 194
Query: 153 I-----------VGTYGYVPPEYVRKGI-YSMKYDVYSYGVLLLQILGGK 190
I GT G+ PE + K + D++S GV+ L +L G+
Sbjct: 195 ICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 101 LLYLQEYSNLTIVHRDLKASNILLDYEMNPKISDFGMARAFTKDECEANTGRIV-GTYGY 159
LL L + +VH D+K +NI L K+ DFG+ A G + G Y
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT----AGAGEVQEGDPRY 222
Query: 160 VPPEYVRKGIYSMKYDVYSYGVLLLQI 186
+ PE + +G Y DV+S G+ +L++
Sbjct: 223 MAPELL-QGSYGTAADVFSLGLTILEV 248
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 112 IVHRDLKASNILLDYEMNPKISDFGMARAFTKDE 145
I+HRDLK +N LL+ + + KI DFG+AR D+
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYE-MNPKISDFGMARAFTKDECEAN--TGR-IV 154
+GL YL + I+H D+KA N+LL + + + DFG A D + TG I
Sbjct: 177 EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 155 GTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKR--TSCYYGP 198
GT ++ PE V K DV+S ++L +L G T + GP
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 99 QGLLYLQEYSNLTIVHRDLKASNILLDYE-MNPKISDFGMARAFTKDECEAN--TGR-IV 154
+GL YL + I+H D+KA N+LL + + + DFG A D + TG I
Sbjct: 196 EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 155 GTYGYVPPEYVRKGIYSMKYDVYSYGVLLLQILGGKR--TSCYYGP 198
GT ++ PE V K DV+S ++L +L G T + GP
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 298
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,224,261
Number of Sequences: 62578
Number of extensions: 383789
Number of successful extensions: 2979
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 1108
Number of HSP's gapped (non-prelim): 1112
length of query: 309
length of database: 14,973,337
effective HSP length: 99
effective length of query: 210
effective length of database: 8,778,115
effective search space: 1843404150
effective search space used: 1843404150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)