Query 021683
Match_columns 309
No_of_seqs 229 out of 1682
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 04:52:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021683.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021683hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 3.4E-84 7.5E-89 558.5 27.0 287 22-308 67-359 (369)
2 PLN03158 methionine aminopepti 100.0 2.4E-73 5.2E-78 530.9 33.8 287 22-308 88-380 (396)
3 COG0024 Map Methionine aminope 100.0 1.7E-63 3.6E-68 434.6 29.1 244 65-308 4-251 (255)
4 PRK12897 methionine aminopepti 100.0 2.4E-59 5.1E-64 416.5 29.6 246 64-309 2-248 (248)
5 PRK12318 methionine aminopepti 100.0 9.7E-59 2.1E-63 419.9 33.2 250 60-309 36-289 (291)
6 PRK07281 methionine aminopepti 100.0 7.7E-59 1.7E-63 418.4 29.6 246 64-309 2-280 (286)
7 PRK12896 methionine aminopepti 100.0 1.4E-57 2.9E-62 407.0 30.8 247 62-308 6-254 (255)
8 TIGR00500 met_pdase_I methioni 100.0 9E-57 1.9E-61 399.9 30.4 244 65-308 2-246 (247)
9 PRK05716 methionine aminopepti 100.0 2.4E-56 5.3E-61 398.3 29.9 246 64-309 3-249 (252)
10 cd01086 MetAP1 Methionine Amin 100.0 1.3E-52 2.8E-57 371.2 29.1 237 72-308 1-238 (238)
11 PRK09795 aminopeptidase; Provi 100.0 5.5E-52 1.2E-56 388.3 26.5 226 59-309 120-351 (361)
12 COG0006 PepP Xaa-Pro aminopept 100.0 5.5E-50 1.2E-54 377.8 24.5 227 57-308 145-375 (384)
13 PRK15173 peptidase; Provisiona 100.0 1.8E-49 3.8E-54 365.1 25.7 227 57-309 86-315 (323)
14 PRK10879 proline aminopeptidas 100.0 2E-49 4.3E-54 378.3 26.8 235 58-308 165-419 (438)
15 cd01090 Creatinase Creatine am 100.0 1.1E-48 2.4E-53 343.3 26.3 224 72-308 1-228 (228)
16 cd01087 Prolidase Prolidase. E 100.0 1.1E-48 2.4E-53 347.1 25.4 223 72-308 1-243 (243)
17 TIGR02993 ectoine_eutD ectoine 100.0 4.2E-49 9.2E-54 371.9 23.5 226 57-309 149-383 (391)
18 PRK14575 putative peptidase; P 100.0 9.8E-49 2.1E-53 370.8 26.0 227 57-309 169-398 (406)
19 PRK14576 putative endopeptidas 100.0 3.5E-48 7.5E-53 366.9 26.0 225 59-309 170-397 (405)
20 TIGR00495 crvDNA_42K 42K curve 100.0 1E-45 2.2E-50 345.9 28.8 244 64-308 11-336 (389)
21 PTZ00053 methionine aminopepti 100.0 4E-45 8.7E-50 344.1 28.2 263 37-308 112-466 (470)
22 PRK13607 proline dipeptidase; 100.0 8.6E-46 1.9E-50 352.7 23.8 245 57-308 152-438 (443)
23 cd01092 APP-like Similar to Pr 100.0 4.2E-45 9.2E-50 316.3 25.8 207 72-303 1-208 (208)
24 PRK08671 methionine aminopepti 100.0 1E-43 2.2E-48 322.4 27.3 227 71-308 1-291 (291)
25 cd01085 APP X-Prolyl Aminopept 100.0 6.8E-44 1.5E-48 311.9 24.0 209 73-305 5-221 (224)
26 TIGR00501 met_pdase_II methion 100.0 5.3E-43 1.2E-47 317.9 27.2 229 69-308 2-295 (295)
27 PF00557 Peptidase_M24: Metall 100.0 6.6E-43 1.4E-47 302.6 23.6 204 73-300 1-207 (207)
28 cd01088 MetAP2 Methionine Amin 100.0 1.5E-42 3.3E-47 314.7 26.3 226 72-308 1-291 (291)
29 cd01091 CDC68-like Related to 100.0 1E-42 2.2E-47 307.7 22.5 226 72-308 1-243 (243)
30 cd01089 PA2G4-like Related to 100.0 4.6E-42 1E-46 301.7 24.7 214 72-308 1-228 (228)
31 cd01066 APP_MetAP A family inc 100.0 1.6E-41 3.5E-46 292.3 24.7 206 72-303 1-207 (207)
32 KOG2414 Putative Xaa-Pro amino 100.0 4.8E-40 1E-44 295.6 17.8 233 58-308 220-471 (488)
33 KOG2737 Putative metallopeptid 100.0 1.5E-36 3.2E-41 270.6 13.9 248 57-308 176-466 (492)
34 KOG1189 Global transcriptional 99.9 4.6E-26 1E-30 217.8 16.4 243 49-309 120-378 (960)
35 KOG2775 Metallopeptidase [Gene 99.9 2.8E-25 6.1E-30 193.1 17.5 237 67-308 80-393 (397)
36 KOG2413 Xaa-Pro aminopeptidase 99.9 1.4E-24 3E-29 205.0 16.4 226 57-304 298-537 (606)
37 KOG2776 Metallopeptidase [Gene 99.9 5.9E-20 1.3E-24 163.7 19.8 243 64-308 13-339 (398)
38 COG5406 Nucleosome binding fac 99.8 1.2E-18 2.5E-23 164.6 13.7 243 51-309 155-418 (1001)
39 cd01086 MetAP1 Methionine Amin 97.7 0.00054 1.2E-08 60.3 12.3 103 179-300 2-105 (238)
40 PLN03158 methionine aminopepti 97.7 0.00038 8.2E-09 65.9 11.6 114 164-300 127-247 (396)
41 cd01066 APP_MetAP A family inc 97.5 0.0019 4.1E-08 54.9 12.2 102 73-176 102-204 (207)
42 PRK05716 methionine aminopepti 97.4 0.0025 5.5E-08 56.6 11.9 100 180-300 13-115 (252)
43 PRK12896 methionine aminopepti 97.4 0.0023 5E-08 56.9 11.4 110 168-300 4-120 (255)
44 cd01088 MetAP2 Methionine Amin 97.4 0.0026 5.7E-08 57.9 11.8 97 179-300 2-100 (291)
45 cd01092 APP-like Similar to Pr 97.3 0.0039 8.5E-08 53.4 11.6 100 73-175 103-204 (208)
46 TIGR00500 met_pdase_I methioni 97.1 0.0095 2.1E-07 52.7 12.3 100 74-176 117-238 (247)
47 COG0024 Map Methionine aminope 97.1 0.0075 1.6E-07 53.5 11.3 86 180-267 13-101 (255)
48 PRK15173 peptidase; Provisiona 97.0 0.01 2.2E-07 54.9 12.0 102 74-176 203-306 (323)
49 cd01091 CDC68-like Related to 96.9 0.01 2.3E-07 52.6 10.9 104 73-176 119-234 (243)
50 PRK12897 methionine aminopepti 96.9 0.011 2.3E-07 52.5 10.6 99 75-176 119-239 (248)
51 PRK14575 putative peptidase; P 96.9 0.015 3.2E-07 55.6 12.0 99 74-176 286-389 (406)
52 KOG2738 Putative methionine am 96.8 0.0094 2E-07 53.3 9.2 87 179-268 123-212 (369)
53 TIGR02993 ectoine_eutD ectoine 96.8 0.014 3.1E-07 55.4 11.3 99 74-176 271-374 (391)
54 PRK14576 putative endopeptidas 96.8 0.021 4.6E-07 54.5 12.3 102 74-176 285-388 (405)
55 PRK12318 methionine aminopepti 96.8 0.019 4.2E-07 52.3 11.4 86 74-162 159-247 (291)
56 PRK09795 aminopeptidase; Provi 96.8 0.026 5.6E-07 53.0 12.7 105 68-175 235-341 (361)
57 PF00557 Peptidase_M24: Metall 96.8 0.022 4.8E-07 48.8 11.3 97 180-299 2-99 (207)
58 cd01090 Creatinase Creatine am 96.7 0.032 6.9E-07 49.0 12.1 99 75-176 111-220 (228)
59 TIGR00495 crvDNA_42K 42K curve 96.7 0.027 5.8E-07 53.4 12.2 103 180-300 21-130 (389)
60 PRK08671 methionine aminopepti 96.7 0.038 8.3E-07 50.3 12.7 97 74-175 102-205 (291)
61 cd01087 Prolidase Prolidase. E 96.6 0.027 5.9E-07 49.7 11.2 102 74-176 104-235 (243)
62 PRK07281 methionine aminopepti 96.6 0.023 5E-07 51.6 10.8 85 74-161 149-237 (286)
63 TIGR00501 met_pdase_II methion 96.5 0.058 1.3E-06 49.2 12.4 96 180-300 7-104 (295)
64 cd01089 PA2G4-like Related to 96.3 0.098 2.1E-06 45.8 12.4 103 180-300 3-112 (228)
65 PTZ00053 methionine aminopepti 95.5 0.15 3.2E-06 49.4 11.0 96 181-299 161-262 (470)
66 COG0006 PepP Xaa-Pro aminopept 95.5 0.19 4.1E-06 47.6 11.5 100 75-176 264-367 (384)
67 PRK10879 proline aminopeptidas 95.0 0.34 7.4E-06 46.8 11.8 101 75-176 284-411 (438)
68 cd01085 APP X-Prolyl Aminopept 92.9 2.5 5.4E-05 36.9 12.1 96 76-175 114-215 (224)
69 PRK13607 proline dipeptidase; 92.4 1.6 3.4E-05 42.3 11.1 88 76-163 271-391 (443)
70 KOG2776 Metallopeptidase [Gene 89.6 3.5 7.5E-05 38.2 9.7 92 181-301 24-133 (398)
71 KOG1189 Global transcriptional 75.8 12 0.00026 38.2 7.7 97 75-176 259-368 (960)
72 KOG2775 Metallopeptidase [Gene 74.9 35 0.00075 31.1 9.7 83 179-267 86-175 (397)
73 PF07305 DUF1454: Protein of u 70.5 40 0.00087 28.5 8.5 75 178-265 114-188 (200)
74 cd01666 TGS_DRG_C TGS_DRG_C: 68.8 16 0.00035 26.0 5.2 52 93-155 21-73 (75)
75 PF00254 FKBP_C: FKBP-type pep 62.1 15 0.00032 26.8 4.2 51 144-203 2-59 (94)
76 COG5406 Nucleosome binding fac 52.4 56 0.0012 33.0 7.2 81 70-158 299-384 (1001)
77 PRK01490 tig trigger factor; P 51.2 51 0.0011 31.7 6.9 45 97-165 132-176 (435)
78 PF06135 DUF965: Bacterial pro 48.9 20 0.00043 25.8 2.7 39 204-245 16-54 (79)
79 TIGR00115 tig trigger factor. 47.1 63 0.0014 30.7 6.8 47 97-167 120-167 (408)
80 PRK05473 hypothetical protein; 43.5 27 0.00059 25.5 2.8 38 205-245 20-57 (86)
81 cd04938 TGS_Obg-like TGS_Obg-l 43.2 38 0.00082 24.1 3.5 47 93-155 28-74 (76)
82 PF05184 SapB_1: Saposin-like 43.2 41 0.0009 20.0 3.3 34 78-111 3-36 (39)
83 PF09506 Salt_tol_Pase: Glucos 42.5 96 0.0021 28.8 6.7 52 67-118 97-148 (381)
84 COG3589 Uncharacterized conser 41.3 23 0.00049 32.8 2.6 132 65-206 224-355 (360)
85 TIGR02399 salt_tol_Pase glucos 40.8 1E+02 0.0022 28.8 6.6 52 67-118 103-154 (389)
86 PF03477 ATP-cone: ATP cone do 38.3 27 0.00059 25.3 2.2 36 80-115 39-74 (90)
87 PF12631 GTPase_Cys_C: Catalyt 35.8 90 0.0019 21.8 4.5 42 177-218 10-51 (73)
88 PRK05423 hypothetical protein; 32.1 69 0.0015 23.8 3.4 28 85-112 44-71 (104)
89 PF02829 3H: 3H domain; Inter 31.0 1E+02 0.0023 23.1 4.4 68 152-221 22-96 (98)
90 PF04363 DUF496: Protein of un 28.8 2.4E+02 0.0052 20.8 5.7 38 74-112 27-64 (95)
91 PF11020 DUF2610: Domain of un 27.5 99 0.0022 22.3 3.4 70 155-232 4-76 (82)
92 TIGR03516 ppisom_GldI peptidyl 27.0 1.6E+02 0.0034 24.7 5.3 53 143-204 82-140 (177)
93 PF04355 SmpA_OmlA: SmpA / Oml 26.8 49 0.0011 22.8 1.9 19 88-106 7-25 (71)
94 KOG2414 Putative Xaa-Pro amino 26.8 4E+02 0.0087 25.7 8.2 107 66-176 334-463 (488)
95 COG0544 Tig FKBP-type peptidyl 26.3 1.5E+02 0.0033 28.7 5.7 44 97-164 132-175 (441)
96 COG0414 PanC Panthothenate syn 26.1 1.7E+02 0.0037 26.5 5.5 58 161-222 181-239 (285)
97 PRK00464 nrdR transcriptional 26.1 1.9E+02 0.0042 23.6 5.5 38 79-116 85-122 (154)
98 cd01669 TGS_Ygr210_C TGS_Ygr21 25.5 1.7E+02 0.0037 20.8 4.5 48 93-155 27-74 (76)
99 PF10415 FumaraseC_C: Fumarase 24.3 82 0.0018 20.9 2.5 35 74-108 10-49 (55)
100 TIGR03147 cyt_nit_nrfF cytochr 22.8 1E+02 0.0022 24.4 3.1 29 80-108 57-85 (126)
101 PF13798 PCYCGC: Protein of un 21.8 1.9E+02 0.0041 23.8 4.5 47 73-119 108-154 (158)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-84 Score=558.51 Aligned_cols=287 Identities=61% Similarity=1.043 Sum_probs=275.0
Q ss_pred CCCCcccCCCCcccCCCCCcCCCCCCCCCCCCCCCCC----CccC-CCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 021683 22 AEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI----GIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPG 96 (309)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~~p~y~~~~~~~----~~~~-~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG 96 (309)
-..|+++++||||++||+++||+||++|+|+..+.+. .... ...|+++++|+.||+||++++++++.+..+++||
T Consensus 67 ~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~Pg 146 (369)
T KOG2738|consen 67 WPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPG 146 (369)
T ss_pred CccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 4558899999999999999999999999999985422 2222 4578999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccC
Q 021683 97 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD 176 (309)
Q Consensus 97 ~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~ 176 (309)
+|++||++++|++++++|+|||+|||.+||+++|+|+|+++|||+|+.|+||+||+|+||++++++|||+|+++||++|+
T Consensus 147 vTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~ 226 (369)
T KOG2738|consen 147 VTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGN 226 (369)
T ss_pred ccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccCCCC-CCcccCC
Q 021683 177 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVL 255 (309)
Q Consensus 177 ~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~-~~~~l~~ 255 (309)
++++.++|++.+++|++.||+.+|||+++.+|++.|++++.++||++++.|+|||||..||..|.|+||+++ ..++|++
T Consensus 227 Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~ 306 (369)
T KOG2738|consen 227 VDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKP 306 (369)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875 6789999
Q ss_pred CcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 256 NQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 256 GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
||+|||||+|+.+.++..+|+|+||.+|+||+.+||||||+|||++|+||||.
T Consensus 307 G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~ 359 (369)
T KOG2738|consen 307 GQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTK 359 (369)
T ss_pred CceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhc
Confidence 99999999999999999999999999999999999999999999999999996
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.4e-73 Score=530.94 Aligned_cols=287 Identities=50% Similarity=0.871 Sum_probs=273.5
Q ss_pred CCCCcccCCCCcccCCCCCcCCCCCCCCCCCCCCCC-----CCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 021683 22 AEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP-----IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPG 96 (309)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~~p~y~~~~~~-----~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG 96 (309)
...|.+++.||||.+||++.||.||++|+|+..+.+ +.+.+.|.|||++||+.||+|+++++++++.+.+.++||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpG 167 (396)
T PLN03158 88 LPDFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPG 167 (396)
T ss_pred CCCCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 455889999999999999999999999999988543 235678999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccC
Q 021683 97 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD 176 (309)
Q Consensus 97 ~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~ 176 (309)
+||.||++.+++.+.++|++|++++|.+||+++|+|.|+.+||++|++++|++||+|++|++++++||++|++|||+||+
T Consensus 168 vTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 168 VTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGN 247 (396)
T ss_pred CCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccCCCC-CCcccCC
Q 021683 177 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVL 255 (309)
Q Consensus 177 ~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~-~~~~l~~ 255 (309)
+++++++++++++++++++|+++|||++++||++++++++++.||+++++++|||||+.+|+.|.|.++.++ ...+|+|
T Consensus 248 ~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~ 327 (396)
T PLN03158 248 VDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKA 327 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999999886433 4579999
Q ss_pred CcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 256 NQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 256 GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
||||||||+++.+.....+|+|+||++|.||.+++|||||||||++|+|+||.
T Consensus 328 GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~ 380 (396)
T PLN03158 328 GQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTA 380 (396)
T ss_pred CcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcceECCC
Confidence 99999999999998888999999999999999999999999999999999996
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-63 Score=434.59 Aligned_cols=244 Identities=45% Similarity=0.789 Sum_probs=234.3
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCC-
Q 021683 65 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 143 (309)
Q Consensus 65 ~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~- 143 (309)
.+|+++||+.||+||++++++++.+.+.++||+|+.||++.+++.+.++|++|++++|.+||..+|+|.|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCC-HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCc
Q 021683 144 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG 222 (309)
Q Consensus 144 ~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~-~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~ 222 (309)
+++|++||+|+||+|+.++||++|.++||.||+.+ +..++|.+++++|++++|+.+|||+++++|.++++++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 67899999999999999999999999999999766 47777999999999999999999999999999999999999999
Q ss_pred ccCCcceecccccCCCCCccccCCCC-CCcccCCCcEEEEcceeecCCCCCcccC-CCceeeeeCCceeEEEEEEEEEcC
Q 021683 223 VVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVLNQTFTIEPMLTIGSINPVMWD-DNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 223 ~~~~~~GHgiG~~~he~p~i~~~~~~-~~~~l~~GmvftiEp~i~~~~~~~~~~~-d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
++++|+|||||..+|+.|+|+++.++ ...+|+|||||+|||+++.+......++ |+|+++|.||+.++||||||+||+
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~ 243 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTE 243 (255)
T ss_pred EeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeC
Confidence 99999999999999999999997554 3469999999999999999999999999 999999999999999999999999
Q ss_pred CCeEecCC
Q 021683 301 DGAEILTQ 308 (309)
Q Consensus 301 ~G~e~LT~ 308 (309)
+|+|+||.
T Consensus 244 ~g~eilT~ 251 (255)
T COG0024 244 DGCEILTL 251 (255)
T ss_pred CCcEEeeC
Confidence 99999995
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.4e-59 Score=416.53 Aligned_cols=246 Identities=36% Similarity=0.613 Sum_probs=232.8
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCC
Q 021683 64 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 143 (309)
Q Consensus 64 r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~ 143 (309)
..||||+||++||+|+++++++++++.+.++||+||.||++.++..+.++|+.....+|.+||.++|+|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 37999999999999999999999999999999999999999999999999998765567789989999999999999999
Q ss_pred CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcc
Q 021683 144 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 223 (309)
Q Consensus 144 ~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~ 223 (309)
+++|++||+|++|+++.++||++|++|||++|+++++++++|+.++++++++++++|||++++||++++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcceecccccCCCCCccccCC-CCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCC
Q 021683 224 VRQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDG 302 (309)
Q Consensus 224 ~~~~~GHgiG~~~he~p~i~~~~-~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G 302 (309)
.++++|||||+.+||.|.+.++. .+++.+|++||||++||++|.+......+.|+|++.|.||.+|+|+||||+||++|
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G 241 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDG 241 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCc
Confidence 88999999999999999986542 34567999999999999999988888889999999999999999999999999999
Q ss_pred eEecCCC
Q 021683 303 AEILTQC 309 (309)
Q Consensus 303 ~e~LT~~ 309 (309)
+|+||+.
T Consensus 242 ~e~lt~~ 248 (248)
T PRK12897 242 PIILTKL 248 (248)
T ss_pred cEEeecC
Confidence 9999974
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=9.7e-59 Score=419.92 Aligned_cols=250 Identities=40% Similarity=0.697 Sum_probs=232.0
Q ss_pred ccCCC-CcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCC--CCCCceeecCCcc
Q 021683 60 IVSGP-EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNEC 136 (309)
Q Consensus 60 ~~~~r-~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~--~fp~~v~~g~n~~ 136 (309)
++.++ .|||++||++||+|+++++++++++.+.++||+||.||++.++..+.+.|+.|+.++|. +||+++|+|.|+.
T Consensus 36 ~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~ 115 (291)
T PRK12318 36 ASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEV 115 (291)
T ss_pred cCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccce
Confidence 33444 49999999999999999999999999999999999999999998888899988777775 5899999999999
Q ss_pred cccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021683 137 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 216 (309)
Q Consensus 137 ~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~ 216 (309)
++|+.|++++|++||+|++|+++.++||++|++|||++|+++++++++++.++++++++++.+|||++++||++++++++
T Consensus 116 ~~H~~p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~ 195 (291)
T PRK12318 116 ICHGIPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCA 195 (291)
T ss_pred eecCCCCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcccCCcceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCccc-CCCceeeeeCCceeEEEEEE
Q 021683 217 DRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMW-DDNWTIVTEDGSLSAQFEHT 295 (309)
Q Consensus 217 ~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~-~d~w~~~~~dg~~~~~~Edt 295 (309)
++.||....+++|||||+.+||.|.+.++.++++.+|++||||+|||++|.+......+ .|+|++.+.||..++++|||
T Consensus 196 ~~~G~~~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edt 275 (291)
T PRK12318 196 DKYGFSVVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHT 275 (291)
T ss_pred HHcCCccCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeE
Confidence 99999877889999999999999999776556678999999999999999876555443 48999999999999999999
Q ss_pred EEEcCCCeEecCCC
Q 021683 296 ILITRDGAEILTQC 309 (309)
Q Consensus 296 vlVt~~G~e~LT~~ 309 (309)
|+||++|+|+||.+
T Consensus 276 v~VTe~G~e~LT~~ 289 (291)
T PRK12318 276 ILITETGYEILTLL 289 (291)
T ss_pred EEEcCCcceeCCCC
Confidence 99999999999975
No 6
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=7.7e-59 Score=418.38 Aligned_cols=246 Identities=31% Similarity=0.542 Sum_probs=229.3
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCC----CCCCCceeecCCccccc
Q 021683 64 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECICH 139 (309)
Q Consensus 64 r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~----~~fp~~v~~g~n~~~~h 139 (309)
..+||++||++||+|+++++++++++.+.++||+||.||++.++..+.+.|+.|..+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 47999999999999999999999999999999999999999999999999998877665 45999999999999999
Q ss_pred CCCCCCcCCCCCEEEEEEee---------------------------EeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHH
Q 021683 140 GIPDSRALEDGDTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKVTKDCL 192 (309)
Q Consensus 140 ~~p~~~~l~~GD~v~id~g~---------------------------~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~ 192 (309)
+.|++++|++||+|++|+++ .++||++|++|||++|+++++++++++.+++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccC-CCCCCcccCCCcEEEEcceeecCCCC
Q 021683 193 HKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSIN 271 (309)
Q Consensus 193 ~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~-~~~~~~~l~~GmvftiEp~i~~~~~~ 271 (309)
+++++.+|||++++||++++++++++.||..+.+++|||||+.+||.|.++++ .++.+.+|+|||||+|||++|.+...
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~ 241 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWE 241 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcc
Confidence 99999999999999999999999999999987899999999999999998654 24466799999999999999987655
Q ss_pred Cc-ccCCCceeeeeCCceeEEEEEEEEEcCCCeEecCCC
Q 021683 272 PV-MWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 309 (309)
Q Consensus 272 ~~-~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~e~LT~~ 309 (309)
.. .++|+|++.+.+|+.++|+||||+||++|+|+||.+
T Consensus 242 ~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~ 280 (286)
T PRK07281 242 IDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQ 280 (286)
T ss_pred eecccCCCceEEecCCCcEEEeccEEEEeCCcceECCCC
Confidence 44 368999999999999999999999999999999964
No 7
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.4e-57 Score=407.02 Aligned_cols=247 Identities=45% Similarity=0.798 Sum_probs=233.9
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCC
Q 021683 62 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 141 (309)
Q Consensus 62 ~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~ 141 (309)
++++|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.++...+.+||.++|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 45689999999999999999999999999999999999999999999999999998877777899999999999999999
Q ss_pred CCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCC
Q 021683 142 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 221 (309)
Q Consensus 142 p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~ 221 (309)
|++++|++||+|++|+++.++||++|++|||++|++++++++++++++++++++++.+|||+++++|++++++++++.||
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcceecccccCCCCCcccc-C-CCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEc
Q 021683 222 GVVRQFVGHGIGRVFHADPVVLH-Y-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 299 (309)
Q Consensus 222 ~~~~~~~GHgiG~~~he~p~i~~-~-~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt 299 (309)
....+++||+||+.+||.|.+.. + .++++.+|++||||+|||+++.+..++..|.|+|++.+.+|.+++|+||||+||
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt 245 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEc
Confidence 87789999999999999996543 2 244678999999999999999999999999999999999999999999999999
Q ss_pred CCCeEecCC
Q 021683 300 RDGAEILTQ 308 (309)
Q Consensus 300 ~~G~e~LT~ 308 (309)
++|+|+||+
T Consensus 246 ~~G~e~Lt~ 254 (255)
T PRK12896 246 RDGPEILTD 254 (255)
T ss_pred CCcceecCC
Confidence 999999996
No 8
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=9e-57 Score=399.94 Aligned_cols=244 Identities=48% Similarity=0.792 Sum_probs=231.6
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCC
Q 021683 65 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 144 (309)
Q Consensus 65 ~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~ 144 (309)
+|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+...++.+||.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988766777899889999999999999999
Q ss_pred CcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCccc
Q 021683 145 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV 224 (309)
Q Consensus 145 ~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~ 224 (309)
++|++||+|++|+++.|+||++|++|||++|++++++++++++++++++++++.+|||++++||++++++++++.|+...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcceecccccCCCCCccccCC-CCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCe
Q 021683 225 RQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 303 (309)
Q Consensus 225 ~~~~GHgiG~~~he~p~i~~~~-~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~ 303 (309)
.+++|||||+.+||.|.+..+. .+++.+|++||||++||++|.+...+..+.++|++..++|.+++++||||+||++|+
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~ 241 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP 241 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc
Confidence 7899999999999999876542 345789999999999999999988888899999999999999999999999999999
Q ss_pred EecCC
Q 021683 304 EILTQ 308 (309)
Q Consensus 304 e~LT~ 308 (309)
|+||.
T Consensus 242 e~Lt~ 246 (247)
T TIGR00500 242 EILTE 246 (247)
T ss_pred EEccC
Confidence 99995
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2.4e-56 Score=398.26 Aligned_cols=246 Identities=50% Similarity=0.839 Sum_probs=232.9
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCC
Q 021683 64 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 143 (309)
Q Consensus 64 r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~ 143 (309)
..|||++||+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+...++.+|+.++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998776667778888999999999999999
Q ss_pred CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcc
Q 021683 144 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 223 (309)
Q Consensus 144 ~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~ 223 (309)
+++|++||+|++|+++.++||++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCcceecccccCCCCCccccC-CCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCC
Q 021683 224 VRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDG 302 (309)
Q Consensus 224 ~~~~~GHgiG~~~he~p~i~~~-~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G 302 (309)
.++++|||||+.+||.|.+..+ .++++.+|+|||||+|||+++.+......|+|+|++.+++|.+++++||||+||++|
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G 242 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDG 242 (252)
T ss_pred ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCc
Confidence 7789999999999999987654 345678999999999999999998888999999999999999999999999999999
Q ss_pred eEecCCC
Q 021683 303 AEILTQC 309 (309)
Q Consensus 303 ~e~LT~~ 309 (309)
+|+||.+
T Consensus 243 ~e~Lt~~ 249 (252)
T PRK05716 243 PEILTLR 249 (252)
T ss_pred cEEeeCC
Confidence 9999974
No 10
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.3e-52 Score=371.17 Aligned_cols=237 Identities=53% Similarity=0.923 Sum_probs=224.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCC
Q 021683 72 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 151 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 151 (309)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+...++.+||..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999888777888988899999999999999999999999
Q ss_pred EEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcceec
Q 021683 152 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 231 (309)
Q Consensus 152 ~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~GHg 231 (309)
+|++|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777899999
Q ss_pred ccccCCCCCccc-cCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 232 IGRVFHADPVVL-HYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 232 iG~~~he~p~i~-~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
||+.+||.|.+. ...++++.+|++||||++||++|.+..++..|+++|++.+.+|..++++||||+||++|+|+||+
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 999999999876 23345678999999999999999998888999999999999999999999999999999999995
No 11
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=5.5e-52 Score=388.26 Aligned_cols=226 Identities=21% Similarity=0.350 Sum_probs=209.1
Q ss_pred CccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccc
Q 021683 59 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 138 (309)
Q Consensus 59 ~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~ 138 (309)
.+..+|+|||++||++||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+. +|+++|++|.|...+
T Consensus 120 ~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~p 194 (361)
T PRK09795 120 TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALP 194 (361)
T ss_pred cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEecccccc
Confidence 367899999999999999999999999999999999999999999999999999998763 588999999999999
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccC--CCHH---HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 021683 139 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 213 (309)
Q Consensus 139 h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~--~~~~---~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~ 213 (309)
|+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+.++++++++++++|||++++||+++++
T Consensus 195 h~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~ 274 (361)
T PRK09795 195 HGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAAR 274 (361)
T ss_pred CCCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999963 3433 789999999999999999999999999999999
Q ss_pred HHHHhCCCcc-cCCcceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEE
Q 021683 214 DHADRYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQF 292 (309)
Q Consensus 214 ~~~~~~G~~~-~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~ 292 (309)
+++++.||.. +.|.+|||||+.+||.|.+. ++++.+|++||||+|||++|.+ |.+|+++
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~---~~~~~~l~~gmv~~iEpgiy~~-----------------~~~gvri 334 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIGIEVHEDPRFS---PRDTTTLQPGMLLTVEPGIYLP-----------------GQGGVRI 334 (361)
T ss_pred HHHHHcCCCccCCCCCCccCCccccCCCCcC---CCCCCCcCCCCEEEECCEEEeC-----------------CCCEEEE
Confidence 9999999985 57889999999999999874 3467899999999999999975 4678999
Q ss_pred EEEEEEcCCCeEecCCC
Q 021683 293 EHTILITRDGAEILTQC 309 (309)
Q Consensus 293 EdtvlVt~~G~e~LT~~ 309 (309)
||||+||++|+|+||++
T Consensus 335 Ed~v~vt~~G~e~Lt~~ 351 (361)
T PRK09795 335 EDVVLVTPQGAEVLYAM 351 (361)
T ss_pred eeEEEECCCCcEeCcCC
Confidence 99999999999999974
No 12
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-50 Score=377.78 Aligned_cols=227 Identities=27% Similarity=0.411 Sum_probs=212.2
Q ss_pred CCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc
Q 021683 57 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 136 (309)
Q Consensus 57 ~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~ 136 (309)
...+..+|.|||+.||+.||+|+++++.++.++.+.++||+||.||++.++..+.+.|+... +|++++++|.|.+
T Consensus 145 ~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~~G~n~a 219 (384)
T COG0006 145 SDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVASGENAA 219 (384)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEecccccc
Confidence 34567799999999999999999999999999999999999999999999999999997542 4899999999999
Q ss_pred cccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021683 137 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 216 (309)
Q Consensus 137 ~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~ 216 (309)
.+|+.|+++.+++||+|+||+|+.|+||++|+||||.+|+++++++++|+.+++++.++++++|||+++++|+.++++++
T Consensus 220 ~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i 299 (384)
T COG0006 220 LPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVL 299 (384)
T ss_pred CcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcc-cCCcceeccc--ccCCCCCc-cccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEE
Q 021683 217 DRYNYGV-VRQFVGHGIG--RVFHADPV-VLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQF 292 (309)
Q Consensus 217 ~~~G~~~-~~~~~GHgiG--~~~he~p~-i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~ 292 (309)
.+.|+.. ..|.+|||+| ++.||.|. +. ++...+|+|||||++||++|.+ |.+|+++
T Consensus 300 ~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~---~~~~~~L~~GMv~t~Epg~y~~-----------------g~~GirI 359 (384)
T COG0006 300 EKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS---PGSDTTLEPGMVFSIEPGIYIP-----------------GGGGVRI 359 (384)
T ss_pred HhcCCcccccCCccccCCCCcccCcCccccC---CCCCccccCCcEEEeccccccC-----------------CCceEEE
Confidence 9988875 4667999999 99999995 43 3467899999999999999875 6899999
Q ss_pred EEEEEEcCCCeEecCC
Q 021683 293 EHTILITRDGAEILTQ 308 (309)
Q Consensus 293 EdtvlVt~~G~e~LT~ 308 (309)
||+|+||++|+|+||.
T Consensus 360 Ed~vlVte~G~e~LT~ 375 (384)
T COG0006 360 EDTVLVTEDGFEVLTR 375 (384)
T ss_pred EEEEEEcCCCceeccc
Confidence 9999999999999994
No 13
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.8e-49 Score=365.08 Aligned_cols=227 Identities=20% Similarity=0.287 Sum_probs=203.2
Q ss_pred CCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc
Q 021683 57 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 136 (309)
Q Consensus 57 ~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~ 136 (309)
...+.++|.|||++||+.||+|+++++++++.+.+.++||+||.||++.+...+.+.|... +..| +++.+|.+ .
T Consensus 86 ~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~-~ 159 (323)
T PRK15173 86 SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD-F 159 (323)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-C
Confidence 4457789999999999999999999999999999999999999999999988888776532 1123 35666766 5
Q ss_pred cccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021683 137 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 216 (309)
Q Consensus 137 ~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~ 216 (309)
.+|+.|+++++++||+|++|+++.|+||++|++|||++|+++++++++|+.++++++++++++|||+++++|++++++++
T Consensus 160 ~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~ 239 (323)
T PRK15173 160 SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVI 239 (323)
T ss_pred ccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcc-cCCcceecccc--cCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEE
Q 021683 217 DRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFE 293 (309)
Q Consensus 217 ~~~G~~~-~~~~~GHgiG~--~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~E 293 (309)
++.|+.. ..+++|||||+ .+||.|.+.. +++.+|++||||+|||++|.. |.+|+++|
T Consensus 240 ~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~-----------------g~ggvriE 299 (323)
T PRK15173 240 KKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIE 299 (323)
T ss_pred HHcCCccccCCCCCCcCCCCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcC-----------------CCcEEEEe
Confidence 9999973 56789999996 7899998853 356799999999999999863 45789999
Q ss_pred EEEEEcCCCeEecCCC
Q 021683 294 HTILITRDGAEILTQC 309 (309)
Q Consensus 294 dtvlVt~~G~e~LT~~ 309 (309)
|||+||++|+|+||++
T Consensus 300 DtvlVTe~G~e~LT~~ 315 (323)
T PRK15173 300 DMILINKEGIEFLSKL 315 (323)
T ss_pred eEEEEcCCcceeCCCC
Confidence 9999999999999974
No 14
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=2e-49 Score=378.25 Aligned_cols=235 Identities=20% Similarity=0.290 Sum_probs=207.1
Q ss_pred CCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCccc
Q 021683 58 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 137 (309)
Q Consensus 58 ~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~ 137 (309)
+.+.++|+|||++||++||+|+++++.++.++++.++||+||.||++.+...+.++|+... +|++++++|.|...
T Consensus 165 ~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~-----~~~~iv~~G~na~~ 239 (438)
T PRK10879 165 PWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYP-----SYNTIVGSGENGCI 239 (438)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCC-----CCCcEEEEcCcccc
Confidence 3456789999999999999999999999999999999999999999999999999997532 48889999999999
Q ss_pred ccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021683 138 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 216 (309)
Q Consensus 138 ~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~ 216 (309)
+|+.|++++|++||+|++|+|+.++||++|++|||++ |+++++++++|++++++++++++++|||+++++|++++.+++
T Consensus 240 ~H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~ 319 (438)
T PRK10879 240 LHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIM 319 (438)
T ss_pred ccCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 899999999999999999999999999999999999988665
Q ss_pred H------------------hCCCcc-cCCcceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCC
Q 021683 217 D------------------RYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDD 277 (309)
Q Consensus 217 ~------------------~~G~~~-~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d 277 (309)
. +.++.. ..|.+||+||+++|+.|.+. ++++.+|+|||||||||++|.+.
T Consensus 320 ~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---~~~~~~L~~GmV~tvEPgiY~~~-------- 388 (438)
T PRK10879 320 VSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---QDRSRILEPGMVLTVEPGLYIAP-------- 388 (438)
T ss_pred HHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC---CCCCCcCCCCCEEEECCEEEECC--------
Confidence 3 334432 46779999999999988653 33567999999999999999853
Q ss_pred CceeeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 278 NWTIVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 278 ~w~~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
+|.+......+|+|+||||+||++|+|+||.
T Consensus 389 ~~~~~~~~~~~GiRiED~VlVT~~G~e~LT~ 419 (438)
T PRK10879 389 DADVPEQYRGIGIRIEDDIVITETGNENLTA 419 (438)
T ss_pred CcCcccccCccEEEeccEEEECCCcCeEcCc
Confidence 2233333345799999999999999999996
No 15
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.1e-48 Score=343.35 Aligned_cols=224 Identities=18% Similarity=0.220 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCC-CCCCCCCCceeecCCcccccCCCCCCcCCCC
Q 021683 72 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 150 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~-~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~G 150 (309)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 679999999999999999999999999999999999999998864221 1222333578999999999999999999999
Q ss_pred CEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcc-cCCcce
Q 021683 151 DTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG 229 (309)
Q Consensus 151 D~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~-~~~~~G 229 (309)
|+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++++.||.. ..+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 355699
Q ss_pred ecccccCCCCCcc--ccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCeEecC
Q 021683 230 HGIGRVFHADPVV--LHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILT 307 (309)
Q Consensus 230 HgiG~~~he~p~i--~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~e~LT 307 (309)
|+||+..||.|.- .....+++.+|+|||||++||++|.+. + .+|.+|+++||||+||++|+|+||
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~--------~-----~~g~gG~ried~v~Vt~~G~e~Lt 227 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPE--------G-----QPGAGGYREHDILVINENGAENIT 227 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEECCEEeecc--------c-----CCCCcEEEeeeEEEECCCccccCc
Confidence 9999999987631 112234568999999999999998641 0 025689999999999999999998
Q ss_pred C
Q 021683 308 Q 308 (309)
Q Consensus 308 ~ 308 (309)
.
T Consensus 228 ~ 228 (228)
T cd01090 228 G 228 (228)
T ss_pred C
Confidence 4
No 16
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.1e-48 Score=347.12 Aligned_cols=223 Identities=25% Similarity=0.300 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCC
Q 021683 72 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 151 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 151 (309)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.+ +|+.++++|.|...+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999884 3788999999999999999999999999
Q ss_pred EEEEEEeeEeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCC---------
Q 021683 152 TINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY--------- 221 (309)
Q Consensus 152 ~v~id~g~~~~Gy~~d~~rt~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~--------- 221 (309)
+|++|+++.++||++|++|||++ |++++++++++++++++++++++++|||++++||++++++++++.|+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 69999999999999999999999999999999999999999987532
Q ss_pred ----------cccCCcceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEE
Q 021683 222 ----------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQ 291 (309)
Q Consensus 222 ----------~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~ 291 (309)
....|.+||+||+.+||.|.+.. .++++.+|++||||+|||++|.+...... ++. .+.+|++
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~-~~~------~~~~g~~ 226 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDV-PEY------FRGGGIR 226 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECCEEEeCCccccc-ccc------cceeEEE
Confidence 22456799999999999997621 23467899999999999999986422211 222 2468999
Q ss_pred EEEEEEEcCCCeEecCC
Q 021683 292 FEHTILITRDGAEILTQ 308 (309)
Q Consensus 292 ~EdtvlVt~~G~e~LT~ 308 (309)
+||||+||++|+|+||+
T Consensus 227 ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 227 IEDDVLVTEDGPENLTR 243 (243)
T ss_pred eeeEEEEcCCcceeCcC
Confidence 99999999999999995
No 17
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=4.2e-49 Score=371.94 Aligned_cols=226 Identities=18% Similarity=0.227 Sum_probs=200.0
Q ss_pred CCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHH----cCCccCCCCCCCCCCceeec
Q 021683 57 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID----NGAYPSPLGYGGFPKSVCTS 132 (309)
Q Consensus 57 ~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~----~g~~p~~~~~~~fp~~v~~g 132 (309)
...+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+.+.... .|+. +.+|.+++.+|
T Consensus 149 ~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~~-----~~~~~~iv~sG 223 (391)
T TIGR02993 149 TALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGGD-----YPAIVPLLPSG 223 (391)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCCC-----cCCcccccccC
Confidence 34567889999999999999999999999999999999999999999988655432 1221 12356677899
Q ss_pred CCcccccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Q 021683 133 VNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 212 (309)
Q Consensus 133 ~n~~~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~ 212 (309)
.|...+|+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|+.++++++++++++|||++++||++++
T Consensus 224 ~~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~ 303 (391)
T TIGR02993 224 ADASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAF 303 (391)
T ss_pred ccccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCcccCCcceecccccCCCC-----CccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCc
Q 021683 213 QDHADRYNYGVVRQFVGHGIGRVFHAD-----PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGS 287 (309)
Q Consensus 213 ~~~~~~~G~~~~~~~~GHgiG~~~he~-----p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~ 287 (309)
++++++.||.. .|++|||||+.+|+. |.+. ++++.+|++||||+|||++|.+ |
T Consensus 304 ~~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~---~~~~~~L~~GMv~tvEpgiy~~-----------------~- 361 (391)
T TIGR02993 304 FAVLKKYGIHK-DSRTGYPIGLSYPPDWGERTMSLR---PGDNTVLKPGMTFHFMTGLWME-----------------D- 361 (391)
T ss_pred HHHHHHcCCcc-CCCceeeeccCcCCCCCCcccccc---CCCCceecCCCEEEEcceeEeC-----------------C-
Confidence 99999999975 578999999988742 3343 3467899999999999999874 2
Q ss_pred eeEEEEEEEEEcCCCeEecCCC
Q 021683 288 LSAQFEHTILITRDGAEILTQC 309 (309)
Q Consensus 288 ~~~~~EdtvlVt~~G~e~LT~~ 309 (309)
.|+++||||+||++|+|+||.+
T Consensus 362 ~Gvried~v~VT~~G~e~Lt~~ 383 (391)
T TIGR02993 362 WGLEITESILITETGVECLSSV 383 (391)
T ss_pred CCeEEeeEEEECCCcceecccC
Confidence 4799999999999999999974
No 18
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=9.8e-49 Score=370.80 Aligned_cols=227 Identities=20% Similarity=0.276 Sum_probs=204.3
Q ss_pred CCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc
Q 021683 57 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 136 (309)
Q Consensus 57 ~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~ 136 (309)
...+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|.... ..| +++.+|.+ .
T Consensus 169 ~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~-~~v~~G~~-~ 242 (406)
T PRK14575 169 SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVGAD-F 242 (406)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcC-ceEEECCC-c
Confidence 34467899999999999999999999999999999999999999999999998888776431 112 35677776 5
Q ss_pred cccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021683 137 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 216 (309)
Q Consensus 137 ~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~ 216 (309)
.+|+.|+++++++||+|++|+|+.++||++|++|||++|+++++++++|+.++++++++++++|||++++||++++++++
T Consensus 243 ~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~ 322 (406)
T PRK14575 243 SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVI 322 (406)
T ss_pred ccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcc-cCCcceecccc--cCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEE
Q 021683 217 DRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFE 293 (309)
Q Consensus 217 ~~~G~~~-~~~~~GHgiG~--~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~E 293 (309)
++.||.. ..+++|||||+ .+||.|++.. +++.+|++||||++||++|.. |.+|+++|
T Consensus 323 ~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~---~~~~~Le~GMv~tiEpgiy~~-----------------g~gGvriE 382 (406)
T PRK14575 323 KKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIE 382 (406)
T ss_pred HHcCCccccCCCCCCcccCCCCCccCCCCCC---CCCCCcCCCCEEEECCeeecC-----------------CCcEEEEE
Confidence 9999974 46789999995 7899998864 356799999999999999874 45789999
Q ss_pred EEEEEcCCCeEecCCC
Q 021683 294 HTILITRDGAEILTQC 309 (309)
Q Consensus 294 dtvlVt~~G~e~LT~~ 309 (309)
|||+||++|+|+||++
T Consensus 383 DtvlVT~~G~e~LT~~ 398 (406)
T PRK14575 383 DMILINKEGIEFLSKL 398 (406)
T ss_pred eEEEEcCCCcccCCCC
Confidence 9999999999999974
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=3.5e-48 Score=366.93 Aligned_cols=225 Identities=21% Similarity=0.257 Sum_probs=204.2
Q ss_pred CccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccc
Q 021683 59 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 138 (309)
Q Consensus 59 ~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~ 138 (309)
.+.++|+|||++||++||+|++++++++.++.+.++||+||.||++.++..+.+.|... +..| +++++|.| ..+
T Consensus 170 ~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~~ 243 (405)
T PRK14576 170 LFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-FSP 243 (405)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-ccC
Confidence 46789999999999999999999999999999999999999999999999999887531 1123 46788887 568
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 021683 139 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 218 (309)
Q Consensus 139 h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~ 218 (309)
|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+.+.++++++++++|||++++||++++++++++
T Consensus 244 h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~ 323 (405)
T PRK14576 244 KIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKT 323 (405)
T ss_pred CCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcc-cCCcceeccc--ccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEE
Q 021683 219 YNYGV-VRQFVGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHT 295 (309)
Q Consensus 219 ~G~~~-~~~~~GHgiG--~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~Edt 295 (309)
.||.. ..+++|||+| +.+||.|.+. ++++.+|++||||+|||++|.. |.+|+++|||
T Consensus 324 ~G~~~~~~~~~GHgiG~~l~~~e~P~i~---~~~~~~Le~GMv~~vEp~~y~~-----------------g~ggvriEDt 383 (405)
T PRK14576 324 SGLPHYNRGHLGHGDGVFLGLEEVPFVS---TQATETFCPGMVLSLETPYYGI-----------------GVGSIMLEDM 383 (405)
T ss_pred cCCccccCCCCCCCCCCCCCcCcCCCcC---CCCCCccCCCCEEEECCceeec-----------------CCCEEEEeeE
Confidence 99974 4578999999 6889999864 2456799999999999998864 5689999999
Q ss_pred EEEcCCCeEecCCC
Q 021683 296 ILITRDGAEILTQC 309 (309)
Q Consensus 296 vlVt~~G~e~LT~~ 309 (309)
|+||++|+|+||++
T Consensus 384 vlVTe~G~e~LT~~ 397 (405)
T PRK14576 384 ILITDSGFEFLSKL 397 (405)
T ss_pred EEECCCccccCCCC
Confidence 99999999999975
No 20
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=1e-45 Score=345.92 Aligned_cols=244 Identities=20% Similarity=0.346 Sum_probs=214.1
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCC----CCCCCCCceeecCCccccc
Q 021683 64 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVNECICH 139 (309)
Q Consensus 64 r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~----~~~~fp~~v~~g~n~~~~h 139 (309)
-.+|+++||+.||+|++|++++++.+.+.++||+|+.||++.+++.+.++++. ... .+.+++...|+|.|++++|
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 47999999999999999999999999999999999999999999999887643 111 1334444457789999999
Q ss_pred CCC--C--CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Q 021683 140 GIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 210 (309)
Q Consensus 140 ~~p--~--~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~-----~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~ 210 (309)
++| + +++|++||+|+||+|++++||++|++|||+||+ +++++.++++++++|++++++.+|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 488999999999999999999999999999995 4678999999999999999999999999999999
Q ss_pred HHHHHHHhCCCcccCCcceecccccCCC-CCcc-ccCCC-----CCCcccCCCcEEEEcceeecCCCCCcccCCCce---
Q 021683 211 TIQDHADRYNYGVVRQFVGHGIGRVFHA-DPVV-LHYRN-----NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWT--- 280 (309)
Q Consensus 211 ~~~~~~~~~G~~~~~~~~GHgiG~~~he-~p~i-~~~~~-----~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~--- 280 (309)
+++++++++||.++++++||+||..+|+ .|.| .++.. .....|++||||+|||+++.+++.++.++|.||
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~ 249 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYK 249 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEE
Confidence 9999999999999999999999999987 7875 44322 235689999999999999999888876666554
Q ss_pred -----------------------------------------------------------eeeeCCceeEEEEEEEEEcCC
Q 021683 281 -----------------------------------------------------------IVTEDGSLSAQFEHTILITRD 301 (309)
Q Consensus 281 -----------------------------------------------------------~~~~dg~~~~~~EdtvlVt~~ 301 (309)
+..++|.+.+|||+||+|+++
T Consensus 250 ~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~ 329 (389)
T TIGR00495 250 RDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPN 329 (389)
T ss_pred ECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCC
Confidence 245679999999999999999
Q ss_pred CeEecCC
Q 021683 302 GAEILTQ 308 (309)
Q Consensus 302 G~e~LT~ 308 (309)
|+++||.
T Consensus 330 g~~~~t~ 336 (389)
T TIGR00495 330 GPMRITS 336 (389)
T ss_pred CcEEeCC
Confidence 9999996
No 21
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=4e-45 Score=344.12 Aligned_cols=263 Identities=25% Similarity=0.354 Sum_probs=220.7
Q ss_pred CCCCcCCCCCCCCCCCCCCCC-----------CCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHH
Q 021683 37 SPHRPVPDHIPRPPYVNSQKP-----------IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKA 105 (309)
Q Consensus 37 ~~~~~~~~~i~~p~y~~~~~~-----------~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~ 105 (309)
+|++++...++.-.|....+. ++-.+.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..
T Consensus 112 p~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~e~~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ 191 (470)
T PTZ00053 112 PPTIPVSKQFKDGEYPVGEIQEYPGENSSRTSSEEKRELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICER 191 (470)
T ss_pred CCCCCHHHhCCCCCCCcceEEecCccccccCCchhhCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 567777777777666544321 111233456899999999999999999999999999999999999998
Q ss_pred HHHHHHHc----CCccCCCCCCCCCCceeecCCcccccCCCC---CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCC
Q 021683 106 VHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 178 (309)
Q Consensus 106 ~~~~~~~~----g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~---~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~ 178 (309)
++..+.+. |+.. ..+||+ |+|.|++.+|++|+ +++|++||+|+||+|++++||++|++|||++|
T Consensus 192 ie~~ir~~~~~~G~~~----g~aFPt--~vS~N~~aaH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg--- 262 (470)
T PTZ00053 192 IESKSRELIEADGLKC----GWAFPT--GCSLNHCAAHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN--- 262 (470)
T ss_pred HHHHHHHHHHhcCCcc----cCCCCc--eeecCccccCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---
Confidence 88876554 4432 235887 56899999999995 78899999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCc---------ccCCcceecccc-cCCCCCccccCCCC
Q 021683 179 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG---------VVRQFVGHGIGR-VFHADPVVLHYRNN 248 (309)
Q Consensus 179 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~---------~~~~~~GHgiG~-~~he~p~i~~~~~~ 248 (309)
++++++++++++|++++|+.++||++++||+++++++++++||. ++++++|||||+ .+|+.|.++...++
T Consensus 263 ~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~ 342 (470)
T PTZ00053 263 PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGG 342 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCC
Confidence 68899999999999999999999999999999999999999974 468999999998 89998888776666
Q ss_pred CCcccCCCcEEEEcceeecCCCCCc------------------------------------------ccCCCc-------
Q 021683 249 DHGRMVLNQTFTIEPMLTIGSINPV------------------------------------------MWDDNW------- 279 (309)
Q Consensus 249 ~~~~l~~GmvftiEp~i~~~~~~~~------------------------------------------~~~d~w------- 279 (309)
+..+|++||||+|||+++.+.+.+. .|.|.-
T Consensus 343 ~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~ 422 (470)
T PTZ00053 343 ENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDPGAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLL 422 (470)
T ss_pred CCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcCcCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHH
Confidence 7789999999999999998866643 132221
Q ss_pred --------------e-eeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 280 --------------T-IVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 280 --------------~-~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
. ++..+|.+.+||||||+++++|.|+||+
T Consensus 423 gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~~~~vis~ 466 (470)
T PTZ00053 423 ALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPTCKEVLSR 466 (470)
T ss_pred HHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCCCCEecCC
Confidence 1 2456899999999999999999999995
No 22
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=8.6e-46 Score=352.68 Aligned_cols=245 Identities=16% Similarity=0.193 Sum_probs=197.9
Q ss_pred CCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc
Q 021683 57 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 136 (309)
Q Consensus 57 ~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~ 136 (309)
...+.++|+|||++||++||+|+++++++++++++.++||+||.||++.+.... ..++.. .+|++++++|.|+.
T Consensus 152 ~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa 225 (443)
T PRK13607 152 LDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAA 225 (443)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcce
Confidence 335678899999999999999999999999999999999999999998654332 222211 24888999999999
Q ss_pred cccCCCCCC-cCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Q 021683 137 ICHGIPDSR-ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH 215 (309)
Q Consensus 137 ~~h~~p~~~-~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~ 215 (309)
++|+.|+++ ++++||+|++|+|+.++||++|++|||+ |+++++++++|+++++|++++++++|||++++||+.++.++
T Consensus 226 ~~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~ 304 (443)
T PRK13607 226 VLHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQR 304 (443)
T ss_pred EecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Confidence 999999875 6899999999999999999999999999 88899999999999999999999999999999999998866
Q ss_pred H----HhCCCc----------------ccCCcceecccccCCCCCccccC-------------CCCCCcccCCCcEEEEc
Q 021683 216 A----DRYNYG----------------VVRQFVGHGIGRVFHADPVVLHY-------------RNNDHGRMVLNQTFTIE 262 (309)
Q Consensus 216 ~----~~~G~~----------------~~~~~~GHgiG~~~he~p~i~~~-------------~~~~~~~l~~GmvftiE 262 (309)
+ .+.|+. .+.|.+||+||++.||.+.+... .-....+|+||||||||
T Consensus 305 i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvE 384 (443)
T PRK13607 305 IAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIE 384 (443)
T ss_pred HHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEEC
Confidence 6 444443 24677999999999997533110 00135799999999999
Q ss_pred ceeecCCCCCcccCC-------Cceeee-eCCceeEEEEEEEEEcCCCeEecCC
Q 021683 263 PMLTIGSINPVMWDD-------NWTIVT-EDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 263 p~i~~~~~~~~~~~d-------~w~~~~-~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
|++|.....+..|.+ +|..+. -.+.+|+|+||+|+||++|+|+||+
T Consensus 385 PGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 385 PGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred CeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 999997532222221 122221 1245699999999999999999995
No 23
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=4.2e-45 Score=316.35 Aligned_cols=207 Identities=29% Similarity=0.500 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCC
Q 021683 72 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 151 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 151 (309)
|++||+|+++++.++.++.+.++||+||.||++.+++.+.++|+++. +|++++++|.|...+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGP-----SFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC-----CCCcEEEECccccccCCCCCCcCcCCCC
Confidence 68999999999999999999999999999999999999999998743 4899999999999999999999999999
Q ss_pred EEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcc-cCCccee
Q 021683 152 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGH 230 (309)
Q Consensus 152 ~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~-~~~~~GH 230 (309)
+|++|+++.++||++|++||+++|+++++++++++.+.++++.+++++|||++++||+++++++++++|+.. ..+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 3566999
Q ss_pred cccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCe
Q 021683 231 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 303 (309)
Q Consensus 231 giG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~ 303 (309)
+||+.+||.|.+. ++++.+|++||||+|||+++.+ +.+++++||||+||++|+
T Consensus 156 ~iG~~~~e~p~i~---~~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 156 GVGLEVHEAPYIS---PGSDDVLEEGMVFTIEPGIYIP-----------------GKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCcccCcCCCcC---CCCCCCcCCCCEEEECCeEEec-----------------CCCEEEeeeEEEECCCCC
Confidence 9999999999864 3467899999999999999864 467899999999999995
No 24
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1e-43 Score=322.42 Aligned_cols=227 Identities=31% Similarity=0.577 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCC---CCcC
Q 021683 71 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 147 (309)
Q Consensus 71 EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~---~~~l 147 (309)
+|++||+|+++++++++.+.+.++||+|+.||++.+++.+.+.|+.++ ||+.+ |.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998775 88654 578888999985 6889
Q ss_pred CCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCc
Q 021683 148 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF 227 (309)
Q Consensus 148 ~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~ 227 (309)
++||+|++|+|++++||++|++||+++| ++++++++++.+|++++++.+|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred ceecccc-cCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCc---------------------------------
Q 021683 228 VGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV--------------------------------- 273 (309)
Q Consensus 228 ~GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~--------------------------------- 273 (309)
+||+||+ .+|+.|.|+....+++.+|++||||+|||+++.+.+.+.
T Consensus 150 ~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~~ 229 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEYN 229 (291)
T ss_pred cccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHCC
Confidence 9999997 799999987766667889999999999999988866653
Q ss_pred ------ccCCC--------------------ce-eeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 274 ------MWDDN--------------------WT-IVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 274 ------~~~d~--------------------w~-~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
.|.++ +. ++.++|.+.+||||||+||++|++++|.
T Consensus 230 ~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 230 TLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred CCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 12211 12 2457899999999999999999999985
No 25
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=6.8e-44 Score=311.88 Aligned_cols=209 Identities=15% Similarity=0.138 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCC--CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCC---CCcC
Q 021683 73 ECMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 147 (309)
Q Consensus 73 ~~~r~A~~i~~~~l~~~~~~i~pG--~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~---~~~l 147 (309)
+.||.+..+ .++++.+.+.++|| +||.||++.+++.+.+.|.++. .+||+++|+|.|+.++|+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 345666655 58999999999999 9999999999988877665432 148999999999999999998 9999
Q ss_pred CCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHhCCCcccCC
Q 021683 148 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVC-APGMEYKKIGKTIQDHADRYNYGVVRQ 226 (309)
Q Consensus 148 ~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~-kpG~~~~~i~~~~~~~~~~~G~~~~~~ 226 (309)
++||+|++|+++.++||++|++|||++|+++++++++++.+++++.++++.+ +||+++.+|.+++++++.+.|+. +.+
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999988 59999999999999999999986 467
Q ss_pred cceeccc--ccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCeE
Q 021683 227 FVGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAE 304 (309)
Q Consensus 227 ~~GHgiG--~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~e 304 (309)
++||||| +.+||.|.+. +.++++.+|++||||+|||++|.+ |.+++++||||+||++|+.
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~-----------------g~~gvried~v~Vt~~G~~ 220 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKE-----------------GKYGIRIENLVLVVEAETT 220 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeC-----------------CCeEEEeeEEEEEeeCCcC
Confidence 8999999 5789999875 234466899999999999999974 5689999999999999985
Q ss_pred e
Q 021683 305 I 305 (309)
Q Consensus 305 ~ 305 (309)
-
T Consensus 221 ~ 221 (224)
T cd01085 221 E 221 (224)
T ss_pred C
Confidence 3
No 26
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=5.3e-43 Score=317.92 Aligned_cols=229 Identities=30% Similarity=0.491 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCC---CC
Q 021683 69 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 145 (309)
Q Consensus 69 ~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~---~~ 145 (309)
-+||+.||+|+++++++++.+.+.++||+|+.||++.+++.+.+.|+.++ ||+++ +.|+..+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~a------Fp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcce--ecCCEeeCCCCCCCcCc
Confidence 37899999999999999999999999999999999999999999999864 88864 578999999985 67
Q ss_pred cCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccC
Q 021683 146 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR 225 (309)
Q Consensus 146 ~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~ 225 (309)
+|++||+|++|+|++++||++|++||+++|+ .++++++++.+|++++++.+|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999985 3689999999999999999999999999999999999999999888
Q ss_pred Ccceecccc-cCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCc-------------------------------
Q 021683 226 QFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV------------------------------- 273 (309)
Q Consensus 226 ~~~GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~------------------------------- 273 (309)
+++||+||. ..|+++.++...+.++.+|++||||+|||+++.+.+.+.
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~~ 230 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDEN 230 (295)
T ss_pred CCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHHH
Confidence 999999995 788887766555556789999999999999887755542
Q ss_pred --------ccCCC---------------------ce-eeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 274 --------MWDDN---------------------WT-IVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 274 --------~~~d~---------------------w~-~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
.|.+. +. +..++|.+.+||||||+|+++|++++|.
T Consensus 231 ~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 231 YGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred CCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 12222 11 2457899999999999999999999985
No 27
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=6.6e-43 Score=302.65 Aligned_cols=204 Identities=30% Similarity=0.495 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHH-HHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCC
Q 021683 73 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 151 (309)
Q Consensus 73 ~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~-~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 151 (309)
|+||+|+++++++++++.+.++||+||.||++.+.+. +.++|.... +|++++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~-----~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEP-----AFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEE-----SSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcc-----cCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 566674332 4788999999999999999999999999
Q ss_pred EEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCC-cccCCccee
Q 021683 152 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 230 (309)
Q Consensus 152 ~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~-~~~~~~~GH 230 (309)
+|++|+++.++||++|++||+++| ++++++++++.++++++.+++.+|||++++||++++.+.++++|| ....+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 556788999
Q ss_pred cccccCCCC-CccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 231 GIGRVFHAD-PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 231 giG~~~he~-p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
+||+.+|+. |++.. .+++.+|++||||+|||+++.. ++.+++++||||+||+
T Consensus 155 ~iG~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~----------------~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFI----------------PGWGGVRFEDTVLVTE 207 (207)
T ss_dssp EESSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEE----------------TTSEEEEEBEEEEEES
T ss_pred cccccccccceeeec--ccccceecCCCceeEeeeEEcc----------------CCCcEEEEEEEEEECc
Confidence 999999997 98753 3467899999999999998732 2456999999999996
No 28
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.5e-42 Score=314.69 Aligned_cols=226 Identities=32% Similarity=0.564 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCC---CcCC
Q 021683 72 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS---RALE 148 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~---~~l~ 148 (309)
++.||+|+++++++++++.+.++||+|+.||++.+++.+.++|..++ ||+ ++|.|+..+|+.|+. ++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998764 775 468999999999864 8999
Q ss_pred CCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcc
Q 021683 149 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFV 228 (309)
Q Consensus 149 ~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~ 228 (309)
+||+|++|+|++++||++|++||+.+|+ +++++++++++|++++++.+|||++++||+++++++++++||..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999985 7889999999999999999999999999999999999999999888999
Q ss_pred eecccc-cCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCc----------------------------------
Q 021683 229 GHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV---------------------------------- 273 (309)
Q Consensus 229 GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~---------------------------------- 273 (309)
||+||. .+|+.|.++....+++.+|++||||+|||+++.+.+.+.
T Consensus 150 GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~~ 229 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFGT 229 (291)
T ss_pred ccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999995 799998887765566789999999999999988876642
Q ss_pred -----ccCCC---------------------ce-eeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 274 -----MWDDN---------------------WT-IVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 274 -----~~~d~---------------------w~-~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
.|.+. +. +..++|.+.+||||||+|+++|++++|+
T Consensus 230 ~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 230 LPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred CCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 23322 12 2457899999999999999999999985
No 29
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1e-42 Score=307.74 Aligned_cols=226 Identities=15% Similarity=0.222 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hCCCC--CcHHHHHHHHHHHHHHcCCc-----cCCCCCCCCCCceeecCCc-ccc
Q 021683 72 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAY-----PSPLGYGGFPKSVCTSVNE-CIC 138 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~-----~i~pG--~te~ei~~~~~~~~~~~g~~-----p~~~~~~~fp~~v~~g~n~-~~~ 138 (309)
++.+|+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. |..+. .+|++++++|.|. .++
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976655 89999 99999999999999988744 22222 2599999999999 799
Q ss_pred cCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 021683 139 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 218 (309)
Q Consensus 139 h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~ 218 (309)
|+.++++.++.|++|.+|+|++|+|||+|++|||++| ++++++++|+.++++++++++++|||+++++|++++.+++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred CCCcc---cCCcceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEE
Q 021683 219 YNYGV---VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHT 295 (309)
Q Consensus 219 ~G~~~---~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~Edt 295 (309)
.|... +.+.+||+||+++||.|.+.. +.++.+|++||||++||+++... +.+..-.+++.+|+++|||
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~-------~~~~~~~~~~~~gv~ieDt 229 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQ-------NPEPKDKESKTYALLLSDT 229 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccC--CCCCCCcCCCCEEEEeCCccccc-------CccccCccCCeeEEEEEEE
Confidence 87544 345599999999999886543 23567999999999999998311 1000011235789999999
Q ss_pred EEEcCCCe-EecCC
Q 021683 296 ILITRDGA-EILTQ 308 (309)
Q Consensus 296 vlVt~~G~-e~LT~ 308 (309)
|+||++|+ |+||.
T Consensus 230 V~Vt~~G~~~~LT~ 243 (243)
T cd01091 230 ILVTEDEPAIVLTN 243 (243)
T ss_pred EEEcCCCCceecCC
Confidence 99999999 99985
No 30
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=4.6e-42 Score=301.75 Aligned_cols=214 Identities=24% Similarity=0.411 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcC--CccC-CCCCC--CCCCceeecCCcccccCCC----
Q 021683 72 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLGYG--GFPKSVCTSVNECICHGIP---- 142 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g--~~p~-~~~~~--~fp~~v~~g~n~~~~h~~p---- 142 (309)
+++||+|+++++++++.+.+.++||+||.||+..+++.+.+.. .++. ..++. +||+ +++.|+..+|+.|
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~--~v~~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPT--CISVNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCe--EeccCceeecCCCCCCC
Confidence 3689999999999999999999999999999988887777742 2222 12222 3554 4557999999985
Q ss_pred CCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCH-----HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 021683 143 DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 217 (309)
Q Consensus 143 ~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~-----~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~ 217 (309)
++++|++||+|++|+|+.++||++|++|||++|++++ ++++++++++++++++++.+|||++++||+++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~ 158 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIV 158 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999875 89999999999999999999999999999999999999
Q ss_pred hCCCcccCCcceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEE
Q 021683 218 RYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTIL 297 (309)
Q Consensus 218 ~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~Edtvl 297 (309)
+.||.++.++++|++|..+...|.-. .-..+|++||||++||.++.+ |.+++++||||+
T Consensus 159 ~~G~~~~~~~~~h~~g~~~~~~~~~~----~~~~~l~~gmvf~~ep~~~~~-----------------g~~~~~~~~Tv~ 217 (228)
T cd01089 159 DYGCTPVEGVLSHQLKRVVSSGEGKA----KLVECVKHGLLFPYPVLYEKE-----------------GEVVAQFKLTVL 217 (228)
T ss_pred HcCCEEecCccccCcCceEecCCCCc----cchhhccCCcccccceeEccC-----------------CCeEEEEEEEEE
Confidence 99998888899888887433222100 124589999999999999763 789999999999
Q ss_pred EcCCCeEecCC
Q 021683 298 ITRDGAEILTQ 308 (309)
Q Consensus 298 Vt~~G~e~LT~ 308 (309)
||++|+|.||.
T Consensus 218 vt~~G~e~lt~ 228 (228)
T cd01089 218 LTPNGVTVLTG 228 (228)
T ss_pred EcCCCCeeCCC
Confidence 99999999984
No 31
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.6e-41 Score=292.25 Aligned_cols=206 Identities=28% Similarity=0.500 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCC
Q 021683 72 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 151 (309)
Q Consensus 72 I~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 151 (309)
|+.||+|+++++++++.+.+.++||+||.||++.+.+.+.++|+++ .|+.++.+|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999944 3777888888888999999999999999
Q ss_pred EEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCC-cccCCccee
Q 021683 152 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 230 (309)
Q Consensus 152 ~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~-~~~~~~~GH 230 (309)
+|++|+++.++||++|++||+++|+++++++++++.+.++++.+++.+|||+++.||++++++++++.|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 456788999
Q ss_pred cccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCCCe
Q 021683 231 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 303 (309)
Q Consensus 231 giG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~ 303 (309)
+||+..|+.|.+. .+.+.+|++||+|+|||+++.+ +.+++++||||+||++|+
T Consensus 155 ~iG~~~~e~~~~~---~~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 155 GIGLEIHEPPVLK---AGDDTVLEPGMVFAVEPGLYLP-----------------GGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCcccCCCCCcC---CCCCCCcCCCCEEEECCEEEEC-----------------CCcEEEeeeEEEEeCCCC
Confidence 9999999998843 3456799999999999999874 358999999999999985
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-40 Score=295.62 Aligned_cols=233 Identities=20% Similarity=0.259 Sum_probs=208.0
Q ss_pred CCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCccc
Q 021683 58 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 137 (309)
Q Consensus 58 ~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~ 137 (309)
..+.++|.||||+|+++||+||.|+.+++-..+..-|+...|..+.+.++..+..+|+... +||+.|+.|.|...
T Consensus 220 ~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~~-----AYpPVVAgG~na~t 294 (488)
T KOG2414|consen 220 NLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADRL-----AYPPVVAGGKNANT 294 (488)
T ss_pred HHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCcccc-----ccCCeeecCcccce
Confidence 3566789999999999999999999999999999999999999999999999999999764 59999999999999
Q ss_pred ccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHcCC--CCcHHHHHHHHHH
Q 021683 138 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAP--GMEYKKIGKTIQD 214 (309)
Q Consensus 138 ~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kp--G~~~~~i~~~~~~ 214 (309)
.|+.-++..+.++|+|++|.|+.++||++|+||||.+ |+.++.|++||++++..++..|+.|+| |.++++|+....+
T Consensus 295 IHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~ 374 (488)
T KOG2414|consen 295 IHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNE 374 (488)
T ss_pred EEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999 9999999987665
Q ss_pred HH----HhCCCc------------ccCCcceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCC
Q 021683 215 HA----DRYNYG------------VVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDN 278 (309)
Q Consensus 215 ~~----~~~G~~------------~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~ 278 (309)
.+ ++.|.. ..+|.+||-+|+++|+-|.+.. +..|+|||||||||++|.|... .|+..
T Consensus 375 Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r-----~~pL~pg~ViTIEPGvYIP~d~--d~P~~ 447 (488)
T KOG2414|consen 375 LLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSR-----DIPLQPGMVITIEPGVYIPEDD--DPPEE 447 (488)
T ss_pred HHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCC-----CccCCCCceEEecCceecCccC--CCchH
Confidence 54 444532 2467799999999999998863 4589999999999999997532 22322
Q ss_pred ceeeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 279 WTIVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 279 w~~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
+ .+.|+|+||.|+|++||+|+||.
T Consensus 448 F------rGIGiRIEDDV~i~edg~evLT~ 471 (488)
T KOG2414|consen 448 F------RGIGIRIEDDVAIGEDGPEVLTA 471 (488)
T ss_pred h------cCceEEeecceEeccCCceeehh
Confidence 2 46899999999999999999995
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=1.5e-36 Score=270.60 Aligned_cols=248 Identities=16% Similarity=0.193 Sum_probs=203.6
Q ss_pred CCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc
Q 021683 57 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 136 (309)
Q Consensus 57 ~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~ 136 (309)
.+.+.+.|.|||+.||+.||.|++|++++..++++.++||+.|.++...+......+|+-.. .+|.+++|+|.|..
T Consensus 176 yp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~ 251 (492)
T KOG2737|consen 176 YPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSA 251 (492)
T ss_pred hHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcc
Confidence 45678899999999999999999999999999999999999999999999999999987433 25788999999999
Q ss_pred cccC----CCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Q 021683 137 ICHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKT 211 (309)
Q Consensus 137 ~~h~----~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~v-G~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~ 211 (309)
+.|+ .|+++.+|+||.+++|+|+.|.+|.+|+|++|.. |+.+++|+.+|+++++++.++++++|||+.+.|++..
T Consensus 252 vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~L 331 (492)
T KOG2737|consen 252 VLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKL 331 (492)
T ss_pred eeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHH
Confidence 9998 7999999999999999999999999999999999 9999999999999999999999999999999999876
Q ss_pred HHHHH----HhCCC---------------cccCCcceecccccCCCCC-ccccC-CCC--------CCcccCCCcEEEEc
Q 021683 212 IQDHA----DRYNY---------------GVVRQFVGHGIGRVFHADP-VVLHY-RNN--------DHGRMVLNQTFTIE 262 (309)
Q Consensus 212 ~~~~~----~~~G~---------------~~~~~~~GHgiG~~~he~p-~i~~~-~~~--------~~~~l~~GmvftiE 262 (309)
..+++ ++.|. -..+|-.||.+|++.|+-. +...+ +++ ..+.|++|||+|+|
T Consensus 332 a~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvE 411 (492)
T KOG2737|consen 332 AEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVE 411 (492)
T ss_pred HHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEec
Confidence 65443 44443 1246779999999999621 11111 111 34689999999999
Q ss_pred ceeecCCCCCcc-cCCCce-------ee-eeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 263 PMLTIGSINPVM-WDDNWT-------IV-TEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 263 p~i~~~~~~~~~-~~d~w~-------~~-~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
|++|+-+..+.. ..|.-. +. --.+.+|+|+||.|+||.+|+|.||.
T Consensus 412 PGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~ 466 (492)
T KOG2737|consen 412 PGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC 466 (492)
T ss_pred CChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC
Confidence 999975332221 001000 00 01367899999999999999999984
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.94 E-value=4.6e-26 Score=217.84 Aligned_cols=243 Identities=18% Similarity=0.265 Sum_probs=197.9
Q ss_pred CCCCCCCCCCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHH-----hhhCCCC--CcHHHHHHHHHHHHHHcC----Ccc
Q 021683 49 PPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYA-----GTLVKPG--ITTDEIDKAVHQMIIDNG----AYP 117 (309)
Q Consensus 49 p~y~~~~~~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~-----~~~i~pG--~te~ei~~~~~~~~~~~g----~~p 117 (309)
..|...+++-.+..+..+|++.||+.+|+|++++...|... ...+-.+ +|...|...+...+.+.. ..|
T Consensus 120 ~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~ 199 (960)
T KOG1189|consen 120 GGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDP 199 (960)
T ss_pred cCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCc
Confidence 34555556666788899999999999999999999999843 3445555 677888888887776643 344
Q ss_pred CCCCCCCCCCceeecCCccc-ccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHH
Q 021683 118 SPLGYGGFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAI 196 (309)
Q Consensus 118 ~~~~~~~fp~~v~~g~n~~~-~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i 196 (309)
..+. +.||+++.+|.+-.+ +....+++.| + +|...+|++|++||++++|||.| +|+.++++.|+.++.++.+++
T Consensus 200 ~~~d-~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il 274 (960)
T KOG1189|consen 200 DLLD-MCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEIL 274 (960)
T ss_pred cccc-cccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHH
Confidence 3333 358999998877554 3445677778 3 99999999999999999999999 789999999999999999999
Q ss_pred HHcCCCCcHHHHHHHHHHHHHhCCCcccCCc---ceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCc
Q 021683 197 SVCAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV 273 (309)
Q Consensus 197 ~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~---~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~ 273 (309)
..||||+.+++||.++.+++++.+......| .|.|||++|.|..++.+..+ +.+|++||||.|..++..-.
T Consensus 275 ~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~inaKn--d~~lk~gmvFni~lGf~nl~---- 348 (960)
T KOG1189|consen 275 KLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINAKN--DRVLKKGMVFNISLGFSNLT---- 348 (960)
T ss_pred HhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccccc--hhhhccCcEEEEeecccccc----
Confidence 9999999999999999999999998876666 79999999999988876554 47999999999998875421
Q ss_pred ccCCCceeeeeCCceeEEEEEEEEEcCCCe-EecCCC
Q 021683 274 MWDDNWTIVTEDGSLSAQFEHTILITRDGA-EILTQC 309 (309)
Q Consensus 274 ~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~-e~LT~~ 309 (309)
+ ....+.++..+.|||||+++++ ++||.+
T Consensus 349 ---n----~~~~~~yaL~l~DTvlv~e~~p~~vLT~~ 378 (960)
T KOG1189|consen 349 ---N----PESKNSYALLLSDTVLVGEDPPAEVLTDS 378 (960)
T ss_pred ---C----cccccchhhhccceeeecCCCcchhhccc
Confidence 0 0113458999999999999997 999964
No 35
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.93 E-value=2.8e-25 Score=193.06 Aligned_cols=237 Identities=24% Similarity=0.369 Sum_probs=197.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCC---
Q 021683 67 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD--- 143 (309)
Q Consensus 67 Ks~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~--- 143 (309)
...+...-+|+|+++.+++-..+.+.|+||||..||+..++...++.-.+...-..-+||+. +|.|.+..|+.|+
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG--~SlN~cAAHyTpNaGd 157 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTG--CSLNHCAAHYTPNAGD 157 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCc--ccccchhhhcCCCCCC
Confidence 45667788999999999999999999999999999999988765432111111112368875 5789999999985
Q ss_pred CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCc-
Q 021683 144 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG- 222 (309)
Q Consensus 144 ~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~- 222 (309)
..+|+.+|+++||+|.+.+|-..|++.|+.| .+....|+.+++++...+|+...-.++++||+++++++++++-..
T Consensus 158 ~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEvEi 234 (397)
T KOG2775|consen 158 KTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEI 234 (397)
T ss_pred ceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEEEe
Confidence 4689999999999999999999999999998 667888999999999999999999999999999999999997432
Q ss_pred --------ccCCcceecccc-cCCCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCc--------------------
Q 021683 223 --------VVRQFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV-------------------- 273 (309)
Q Consensus 223 --------~~~~~~GHgiG~-~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~-------------------- 273 (309)
.++++.||+|+. .+|.+..++-..+++.+.|++|..|+||.+-+.+.+.+.
T Consensus 235 ~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~vplr 314 (397)
T KOG2775|consen 235 NGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGHVPLR 314 (397)
T ss_pred CCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhccccccccc
Confidence 367889999999 588888887777788899999999999999887755532
Q ss_pred ----------------------ccCCCc----------------------eeeeeCCceeEEEEEEEEEcCCCeEecCC
Q 021683 274 ----------------------MWDDNW----------------------TIVTEDGSLSAQFEHTILITRDGAEILTQ 308 (309)
Q Consensus 274 ----------------------~~~d~w----------------------~~~~~dg~~~~~~EdtvlVt~~G~e~LT~ 308 (309)
.|.|.. .+..-+|.+.+||||||+..+.+.||+|+
T Consensus 315 l~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEVvsr 393 (397)
T KOG2775|consen 315 LQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEVVSR 393 (397)
T ss_pred cHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcchhcc
Confidence 233322 13445799999999999999999999985
No 36
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.4e-24 Score=204.97 Aligned_cols=226 Identities=16% Similarity=0.206 Sum_probs=190.9
Q ss_pred CCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHh----hhCCCC--CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCcee
Q 021683 57 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAG----TLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC 130 (309)
Q Consensus 57 ~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~----~~i~pG--~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~ 130 (309)
.+.+..++++|++.|++.||.+----..|+-+.+ ..+.-| +||.+++..+++.-..+..+-. .+|+++.+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~ 373 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISS 373 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeec
Confidence 4455667899999999999988765555555544 345556 8999999999998887766532 24999985
Q ss_pred e-cCCcccccCCCC---CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcH
Q 021683 131 T-SVNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP-GMEY 205 (309)
Q Consensus 131 ~-g~n~~~~h~~p~---~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kp-G~~~ 205 (309)
+ |+|.++.|+.|. ++.+.+..+.++|-|++|.-=.+|+|||+++|+|++++++.|..+++.+-++..+.-| |...
T Consensus 374 s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g 453 (606)
T KOG2413|consen 374 SVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKG 453 (606)
T ss_pred cCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCc
Confidence 6 999999999985 4589999999999999998888999999999999999999999999999999998766 7888
Q ss_pred HHHHHHHHHHHHhCCCcccCCcceecccc--cCCCCCccccCC-CCCCcccCCCcEEEEcceeecCCCCCcccCCCceee
Q 021683 206 KKIGKTIQDHADRYNYGVVRQFVGHGIGR--VFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIV 282 (309)
Q Consensus 206 ~~i~~~~~~~~~~~G~~~~~~~~GHgiG~--~~he~p~i~~~~-~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~ 282 (309)
..+...++..+.+.|... .|-+|||+|. ..||+|....++ -++...|++||++++||+.|.
T Consensus 454 ~~lD~laR~~LW~~gLDy-~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~--------------- 517 (606)
T KOG2413|consen 454 SVLDALARSALWKAGLDY-GHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK--------------- 517 (606)
T ss_pred chhHHHHHHHHHhhcccc-CCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc---------------
Confidence 899999999999999875 7889999998 689999766665 345668999999999999987
Q ss_pred eeCCceeEEEEEEEEEcCCCeE
Q 021683 283 TEDGSLSAQFEHTILITRDGAE 304 (309)
Q Consensus 283 ~~dg~~~~~~EdtvlVt~~G~e 304 (309)
||.+|+|+|+.++|.+.+..
T Consensus 518 --dg~fGIRienv~~vvd~~~~ 537 (606)
T KOG2413|consen 518 --DGEFGIRIENVVEVVDAGTK 537 (606)
T ss_pred --cCcceEEEeeEEEEEecccc
Confidence 58999999999999876644
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.85 E-value=5.9e-20 Score=163.74 Aligned_cols=243 Identities=20% Similarity=0.403 Sum_probs=194.5
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcC--CccCC---CCCCCCCCceeecCCcccc
Q 021683 64 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPSP---LGYGGFPKSVCTSVNECIC 138 (309)
Q Consensus 64 r~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g--~~p~~---~~~~~fp~~v~~g~n~~~~ 138 (309)
..+-++..+..||-|++|+..++..+.+.++||++..||+.....++.+.- .|... .-.-+||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 467889999999999999999999999999999999999999998887652 23321 11234787 567999999
Q ss_pred cCCCC----CCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCC-----CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Q 021683 139 HGIPD----SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDV-----DDEARNLVKVTKDCLHKAISVCAPGMEYKKIG 209 (309)
Q Consensus 139 h~~p~----~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~-----~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~ 209 (309)
|+.|- +..|++||+|+||+|+++|||.+.++.|++|+.+ +....+++.++..|.+++++.++||.+-..|.
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 99872 6789999999999999999999999999999854 46778999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcccCCcceecccccC-CCCCccccCCCC------CCcccCCCcEEEEcceeecCCCCCcccC------
Q 021683 210 KTIQDHADRYNYGVVRQFVGHGIGRVF-HADPVVLHYRNN------DHGRMVLNQTFTIEPMLTIGSINPVMWD------ 276 (309)
Q Consensus 210 ~~~~~~~~~~G~~~~~~~~GHgiG~~~-he~p~i~~~~~~------~~~~l~~GmvftiEp~i~~~~~~~~~~~------ 276 (309)
+++.+.+.++++..+....-|..-..+ ...+.|.....+ +...++++.|+++....+.+....+.-+
T Consensus 171 ~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~ 250 (398)
T KOG2776|consen 171 RAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTI 250 (398)
T ss_pred HHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCccccccccccee
Confidence 999999999999877666666655533 334554432221 4568899999999888877665332000
Q ss_pred --------------------------------------C------------------Cce-eeeeCCceeEEEEEEEEEc
Q 021683 277 --------------------------------------D------------------NWT-IVTEDGSLSAQFEHTILIT 299 (309)
Q Consensus 277 --------------------------------------d------------------~w~-~~~~dg~~~~~~EdtvlVt 299 (309)
. .+. ...++|...+||+.|||..
T Consensus 251 y~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~Tvllm 330 (398)
T KOG2776|consen 251 YYKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLM 330 (398)
T ss_pred EEeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEec
Confidence 0 011 2356899999999999999
Q ss_pred CCCeEecCC
Q 021683 300 RDGAEILTQ 308 (309)
Q Consensus 300 ~~G~e~LT~ 308 (309)
++|.-.||.
T Consensus 331 Png~~~l~~ 339 (398)
T KOG2776|consen 331 PNGSLRLTG 339 (398)
T ss_pred cCCCccccC
Confidence 999988874
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.79 E-value=1.2e-18 Score=164.58 Aligned_cols=243 Identities=16% Similarity=0.159 Sum_probs=182.9
Q ss_pred CCCCCCCCCccCCCCcCCHHHHHHHHHHHHHHHHHHHHHhh---hCC-CC--CcHHHHHHHHHHHHHHcCC---------
Q 021683 51 YVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGT---LVK-PG--ITTDEIDKAVHQMIIDNGA--------- 115 (309)
Q Consensus 51 y~~~~~~~~~~~~r~iKs~~EI~~~r~A~~i~~~~l~~~~~---~i~-pG--~te~ei~~~~~~~~~~~g~--------- 115 (309)
|...+++..+..+..+|+.+||+.+|.+++.+...|....+ .+. .+ +|...+...+...+-+-..
T Consensus 155 fN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~ 234 (1001)
T COG5406 155 FNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLG 234 (1001)
T ss_pred cchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccc
Confidence 33345555677888999999999999999999999984432 222 22 4555565555553332211
Q ss_pred --ccCCCCCCCCCCceeecCCcc-cccCCCCCCcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHH
Q 021683 116 --YPSPLGYGGFPKSVCTSVNEC-ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCL 192 (309)
Q Consensus 116 --~p~~~~~~~fp~~v~~g~n~~-~~h~~p~~~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~ 192 (309)
.-..+.| .|.+++.+|..-- .+.....++.+ .||+|...+|.+|+|||+.++||+++ +|+.++++.|+.++.++
T Consensus 235 ~~~~d~lew-~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQ 311 (1001)
T COG5406 235 DIDLDQLEW-CYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQ 311 (1001)
T ss_pred ccchhhhhh-hcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHH
Confidence 1112233 3666777665432 23333445555 48899999999999999999999999 88999999999999999
Q ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCc---ceecccccCCCCCccccCCCCCCcccCCCcEEEEcceeecCC
Q 021683 193 HKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGS 269 (309)
Q Consensus 193 ~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~---~GHgiG~~~he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~ 269 (309)
...+..||||...++||..+.+++++.|....++| +|-+||+.+.+...+.+..+ +++|+.||+|.|..++..-
T Consensus 312 k~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvkn--~r~lq~g~~fnis~gf~nl- 388 (1001)
T COG5406 312 KYILGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVKN--GRVLQAGCIFNISLGFGNL- 388 (1001)
T ss_pred HHHHhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceeccC--CceeccccEEEEeeccccc-
Confidence 99999999999999999999999999999887887 79999999998877766654 3799999999998876431
Q ss_pred CCCcccCCCceeeeeCCceeEEEEEEEEEcCCCeEecCCC
Q 021683 270 INPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 309 (309)
Q Consensus 270 ~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~G~e~LT~~ 309 (309)
.+.. ..+.++.++-||+-|+-+-+.++|.+
T Consensus 389 ------~~~~----~~Nnyal~l~dt~qi~ls~p~~~t~~ 418 (1001)
T COG5406 389 ------INPH----PKNNYALLLIDTEQISLSNPIVFTDS 418 (1001)
T ss_pred ------CCCC----cccchhhhhccceEeecCCceecccC
Confidence 1111 12458889999999998888888864
No 39
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.74 E-value=0.00054 Score=60.32 Aligned_cols=103 Identities=12% Similarity=0.168 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccC-CcceecccccCCCCCccccCCCCCCcccCCCc
Q 021683 179 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR-QFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 257 (309)
Q Consensus 179 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~-~~~GHgiG~~~he~p~i~~~~~~~~~~l~~Gm 257 (309)
+.++++.+.+.+++.++++.++||++-.||..++...+.+.|..... .+.++...........+.|+.+ .+.+|++|+
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~-~~~~l~~Gd 80 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIP-DDRVLKDGD 80 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCC-CCcccCCCC
Confidence 35788999999999999999999999999999999999999975211 0011100000001112333322 457899999
Q ss_pred EEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 258 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 258 vftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
++.++.+... +++.+.+..|+.|.+
T Consensus 81 ~v~id~g~~~------------------~GY~ad~~RT~~~G~ 105 (238)
T cd01086 81 IVNIDVGVEL------------------DGYHGDSARTFIVGE 105 (238)
T ss_pred EEEEEEEEEE------------------CCEEEEEEEEEECCC
Confidence 9999999765 246789999999975
No 40
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.72 E-value=0.00038 Score=65.93 Aligned_cols=114 Identities=10% Similarity=0.130 Sum_probs=81.6
Q ss_pred EEeeeeeEEEccCCC--HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcc-cCCccee----cccccC
Q 021683 164 YHGDTSATFFCGDVD--DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGH----GIGRVF 236 (309)
Q Consensus 164 y~~d~~rt~~vG~~~--~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~-~~~~~GH----giG~~~ 236 (309)
.+.+..++..|..+. +.++++.+.+.++++++.+.++||++-.||..++++.+.+.|... ..++.++ ..|.
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~-- 204 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSV-- 204 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecc--
Confidence 456777778886654 557788889999999999999999999999999999988876432 1111111 1121
Q ss_pred CCCCccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 237 HADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 237 he~p~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
...+.|+.+ ++.+|++|+++.++.+.+.. ++.+-+..|++|++
T Consensus 205 --N~~i~Hgip-~~r~L~~GDiV~iDvg~~~~------------------GY~aD~tRT~~VG~ 247 (396)
T PLN03158 205 --NEVICHGIP-DARKLEDGDIVNVDVTVYYK------------------GCHGDLNETFFVGN 247 (396)
T ss_pred --cccccCCCC-CCccCCCCCEEEEEEeEEEC------------------CEEEeEEeEEEcCC
Confidence 122344322 45689999999999998762 46678899999864
No 41
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.52 E-value=0.0019 Score=54.87 Aligned_cols=102 Identities=20% Similarity=0.229 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCCE
Q 021683 73 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 152 (309)
Q Consensus 73 ~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD~ 152 (309)
+.+|++.+.+.++++.+.+.++||++..||.+.+.+.+.+.|........ ....+.....+.-.-...++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~--~Gh~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHR--TGHGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCC--CccccCcccCCCCCcCCCCCCCcCCCCE
Confidence 56788999999999999999999999999999999999999874211111 1112222111111101124678999999
Q ss_pred EEEEEeeEeC-cEEeeeeeEEEccC
Q 021683 153 INIDVTVYLN-GYHGDTSATFFCGD 176 (309)
Q Consensus 153 v~id~g~~~~-Gy~~d~~rt~~vG~ 176 (309)
+.++.+.... ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999876 58888999999854
No 42
>PRK05716 methionine aminopeptidase; Validated
Probab=97.40 E-value=0.0025 Score=56.57 Aligned_cols=100 Identities=11% Similarity=0.082 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcc---eecccccCCCCCccccCCCCCCcccCCC
Q 021683 180 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFV---GHGIGRVFHADPVVLHYRNNDHGRMVLN 256 (309)
Q Consensus 180 ~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~---GHgiG~~~he~p~i~~~~~~~~~~l~~G 256 (309)
.++++.+.+.+++.++++.++||++-.||..++...+.+.|... .+. ++.--........+.|+. .++.+|++|
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~--~~~~~~~~~~~~~~g~~~~~~h~~-~~~~~l~~G 89 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIP--APLGYHGFPKSICTSVNEVVCHGI-PSDKVLKEG 89 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEe--cccCCCCCCcCeEecccceeecCC-CCCcccCCC
Confidence 35678888889999999999999999999999999999988652 221 111000000011223332 245799999
Q ss_pred cEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 257 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 257 mvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
+++.++.+... +++.+-+.-|+.|.+
T Consensus 90 d~v~id~g~~~------------------~gY~~d~~RT~~vG~ 115 (252)
T PRK05716 90 DIVNIDVTVIK------------------DGYHGDTSRTFGVGE 115 (252)
T ss_pred CEEEEEEEEEE------------------CCEEEEeEEEEECCC
Confidence 99999999865 256788888888743
No 43
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.38 E-value=0.0023 Score=56.91 Aligned_cols=110 Identities=11% Similarity=0.094 Sum_probs=75.4
Q ss_pred eeeEEEccCCCH--HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCC-ccee----cccccCCCCC
Q 021683 168 TSATFFCGDVDD--EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ-FVGH----GIGRVFHADP 240 (309)
Q Consensus 168 ~~rt~~vG~~~~--~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~-~~GH----giG~~~he~p 240 (309)
-.|++.+-++.+ ..+++.+.+.+++.++.+.++||++-.||...+...+.+.|...... ..++ ..|.. .
T Consensus 4 ~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n----~ 79 (255)
T PRK12896 4 EGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVN----E 79 (255)
T ss_pred cCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCC----C
Confidence 357777744333 45677778888888889999999999999999999999998763110 1111 11111 1
Q ss_pred ccccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 241 VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 241 ~i~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
.+.|+.+ ++.+|++|+++.++.+... +++.+-+.-|+++.+
T Consensus 80 ~~~h~~p-~~~~l~~Gd~v~iD~g~~~------------------~gY~aD~~RT~~vG~ 120 (255)
T PRK12896 80 EVAHGIP-GPRVIKDGDLVNIDVSAYL------------------DGYHGDTGITFAVGP 120 (255)
T ss_pred eeEecCC-CCccCCCCCEEEEEEeEEE------------------CcEEEeeEEEEECCC
Confidence 1233322 3468999999999998865 246777888888753
No 44
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.37 E-value=0.0026 Score=57.94 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccCCC--CCCcccCCC
Q 021683 179 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLN 256 (309)
Q Consensus 179 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~--~~~~~l~~G 256 (309)
+.++++.+.+.++++++++.++||++..||...+++.+.+.|.. .. +..+.... +...|+.+ +++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~--~a---fp~~is~n--~~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG--PA---FPVNLSIN--ECAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC--CC---CCceeccC--CEeeCCCCCCCCCcccCCC
Confidence 35788889999999999999999999999999999999999854 22 22222222 22334433 245789999
Q ss_pred cEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 257 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 257 mvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
+++.++.+.... ++.+-+..|+.+.+
T Consensus 75 DvV~iD~G~~~d------------------GY~sD~arT~~vg~ 100 (291)
T cd01088 75 DVVKLDFGAHVD------------------GYIADSAFTVDFDP 100 (291)
T ss_pred CEEEEEEEEEEC------------------CEEEEEEEEEecCh
Confidence 999999998652 35667777877753
No 45
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.30 E-value=0.0039 Score=53.40 Aligned_cols=100 Identities=23% Similarity=0.284 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCC-CCCcCCCCC
Q 021683 73 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 151 (309)
Q Consensus 73 ~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p-~~~~l~~GD 151 (309)
+.+|++.+.+.++++.+.+.++||++-.||.+.+.+.+.+.|..+......++ .+.....+. +...+ ++++|++|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~-p~i~~~~~~~l~~gm 179 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH--GVGLEVHEA-PYISPGSDDVLEEGM 179 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCcC-CCcCCCCCCCcCCCC
Confidence 35678889999999999999999999999999999999999874321111111 111111111 11112 468899999
Q ss_pred EEEEEEeeEeCcE-EeeeeeEEEcc
Q 021683 152 TINIDVTVYLNGY-HGDTSATFFCG 175 (309)
Q Consensus 152 ~v~id~g~~~~Gy-~~d~~rt~~vG 175 (309)
++.|+.+....|+ -.-+..|++|.
T Consensus 180 v~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 180 VFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEEECCeEEecCCCEEEeeeEEEEC
Confidence 9999988876443 44577888874
No 46
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.11 E-value=0.0095 Score=52.75 Aligned_cols=100 Identities=19% Similarity=0.112 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc--cccCC--CCCCcCCC
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI--PDSRALED 149 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~--~~h~~--p~~~~l~~ 149 (309)
..|++...+.++++.+.+.++||++-.||...+.+.+.+.|..+. ..+.++ .+.....+. ++.+. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 346777888889999999999999999999999999999987652 122222 222222221 11111 23678999
Q ss_pred CCEEEEEEeeEe------------------CcEEeeeeeEEEccC
Q 021683 150 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 176 (309)
Q Consensus 150 GD~v~id~g~~~------------------~Gy~~d~~rt~~vG~ 176 (309)
|.++.|+.+.+. +++..-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999988765 235556778888843
No 47
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=97.10 E-value=0.0075 Score=53.49 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcc-cCCcce--ecccccCCCCCccccCCCCCCcccCCC
Q 021683 180 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG--HGIGRVFHADPVVLHYRNNDHGRMVLN 256 (309)
Q Consensus 180 ~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~-~~~~~G--HgiG~~~he~p~i~~~~~~~~~~l~~G 256 (309)
.++++-+.+.++++.+.+.++||++..||.+.+++++++.|.-. ..++-| -.+..++- -.+.|+-++++.+|++|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvN--e~v~HgiP~d~~vlk~G 90 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVN--EVVAHGIPGDKKVLKEG 90 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehh--heeeecCCCCCcccCCC
Confidence 45667777788888889999999999999999999999866542 111112 22222221 12344444467899999
Q ss_pred cEEEEcceeec
Q 021683 257 QTFTIEPMLTI 267 (309)
Q Consensus 257 mvftiEp~i~~ 267 (309)
.++.|..++..
T Consensus 91 Div~IDvg~~~ 101 (255)
T COG0024 91 DIVKIDVGAHI 101 (255)
T ss_pred CEEEEEEEEEE
Confidence 99999999865
No 48
>PRK15173 peptidase; Provisional
Probab=97.02 E-value=0.01 Score=54.95 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCC-CCCCcCCCCCE
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-PDSRALEDGDT 152 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~-p~~~~l~~GD~ 152 (309)
..|++.+++.++.+.+.+.++||++-.||.+.+.+.+.+.|.......+.++...+..+.++. +... .++.+|++|-+
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GMV 281 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGMV 281 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCCE
Confidence 457788889999999999999999999999999999999886432111111111111233321 1111 24578999999
Q ss_pred EEEEEeeEeCc-EEeeeeeEEEccC
Q 021683 153 INIDVTVYLNG-YHGDTSATFFCGD 176 (309)
Q Consensus 153 v~id~g~~~~G-y~~d~~rt~~vG~ 176 (309)
+.|+.+.+..| +-.-+..|++|.+
T Consensus 282 ~tiEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 282 LSLETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred EEECCEEEcCCCcEEEEeeEEEEcC
Confidence 99999887443 3356788998843
No 49
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.93 E-value=0.01 Score=52.57 Aligned_cols=104 Identities=14% Similarity=0.081 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCC-CCCcCCCCC
Q 021683 73 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 151 (309)
Q Consensus 73 ~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p-~~~~l~~GD 151 (309)
+..|++.+++.++.+++.+.++||++-.||.+.+.+.+.+.+..-.....++....+.....+....-.| ++++|++|-
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GM 198 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGM 198 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccCcccccCccccCCCCCCCcCCCC
Confidence 3567788899999999999999999999999999999988752111100011122223333332111112 357899999
Q ss_pred EEEEEEeeE-e----------CcEEeeeeeEEEccC
Q 021683 152 TINIDVTVY-L----------NGYHGDTSATFFCGD 176 (309)
Q Consensus 152 ~v~id~g~~-~----------~Gy~~d~~rt~~vG~ 176 (309)
++.+..|.. . +.|-.-++.|++|.+
T Consensus 199 vf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 199 VFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred EEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 999999986 3 257778899999954
No 50
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.88 E-value=0.011 Score=52.53 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc--cccCC-C-CCCcCCCC
Q 021683 75 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI-P-DSRALEDG 150 (309)
Q Consensus 75 ~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~--~~h~~-p-~~~~l~~G 150 (309)
.|++.+++.++++.+.+.++||++..|+...+.+.+.+.|.... .++.|+ .+..+..+. +.++. + +..+|++|
T Consensus 119 ~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~G 195 (248)
T PRK12897 119 AEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQEG 195 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCCC
Confidence 46666888899999999999999999999999999999886532 222222 222222221 12221 2 34689999
Q ss_pred CEEEEEEeeE-----------------eCc-EEeeeeeEEEccC
Q 021683 151 DTINIDVTVY-----------------LNG-YHGDTSATFFCGD 176 (309)
Q Consensus 151 D~v~id~g~~-----------------~~G-y~~d~~rt~~vG~ 176 (309)
.++.+.-+.+ .+| +..-+..|++|.+
T Consensus 196 mv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 196 MVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 9999998876 244 5667788888854
No 51
>PRK14575 putative peptidase; Provisional
Probab=96.85 E-value=0.015 Score=55.58 Aligned_cols=99 Identities=11% Similarity=0.112 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCcee--ecCCcc--cccCCCCCCcCCC
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALED 149 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~--~g~n~~--~~h~~p~~~~l~~ 149 (309)
..|++.+++.++.+.+.+.++||++-.||.+.+.+.+.+.|.......+ +...+. .|..+. +.+ -++.+|++
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~P~i~~--~~~~~Le~ 361 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEESPFVST--HATESFTS 361 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccCCCCCC--CCCCCcCC
Confidence 3467888889999999999999999999999999999998864321111 112222 233221 111 24578999
Q ss_pred CCEEEEEEeeEeCc-EEeeeeeEEEccC
Q 021683 150 GDTINIDVTVYLNG-YHGDTSATFFCGD 176 (309)
Q Consensus 150 GD~v~id~g~~~~G-y~~d~~rt~~vG~ 176 (309)
|-++.++.+.+..| +-.-+..|++|.+
T Consensus 362 GMv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 362 GMVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CCEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 99999999887544 3356889999954
No 52
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.79 E-value=0.0094 Score=53.26 Aligned_cols=87 Identities=13% Similarity=0.198 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcc-cCCcceecccc--cCCCCCccccCCCCCCcccCC
Q 021683 179 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVL 255 (309)
Q Consensus 179 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~-~~~~~GHgiG~--~~he~p~i~~~~~~~~~~l~~ 255 (309)
+.++++.+.++++++.|..++|||++..||.+++.++.-++|.-+ --++.|..=-. ..-| .|-|. -.+.++||.
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNE--viCHG-IPD~RpLed 199 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNE--VICHG-IPDSRPLED 199 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhh--eeecC-CCCcCcCCC
Confidence 346777788899999999999999999999999999988877542 11111111000 1101 12221 125679999
Q ss_pred CcEEEEcceeecC
Q 021683 256 NQTFTIEPMLTIG 268 (309)
Q Consensus 256 GmvftiEp~i~~~ 268 (309)
|..+.|...+|..
T Consensus 200 GDIvNiDVtvY~~ 212 (369)
T KOG2738|consen 200 GDIVNIDVTVYLN 212 (369)
T ss_pred CCEEeEEEEEEec
Confidence 9999999999873
No 53
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.79 E-value=0.014 Score=55.36 Aligned_cols=99 Identities=16% Similarity=0.247 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc----cccCCC-CCCcCC
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC----ICHGIP-DSRALE 148 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~----~~h~~p-~~~~l~ 148 (309)
.+|++.+++.++.+++.+.++||+|-.||++.+.+.+.+.|.... ...|++ +..+.... .+.-.| ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~Ghg--iGl~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYP--IGLSYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceee--eccCcCCCCCCccccccCCCCceec
Confidence 456788899999999999999999999999999999999886531 122222 22111100 011112 357899
Q ss_pred CCCEEEEEEeeEeCcEEeeeeeEEEccC
Q 021683 149 DGDTINIDVTVYLNGYHGDTSATFFCGD 176 (309)
Q Consensus 149 ~GD~v~id~g~~~~Gy~~d~~rt~~vG~ 176 (309)
+|-++.++-+.+..|+..-+..|++|.+
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEECC
Confidence 9999999999988777667888999853
No 54
>PRK14576 putative endopeptidase; Provisional
Probab=96.77 E-value=0.021 Score=54.48 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCC-CCCcCCCCCE
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 152 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p-~~~~l~~GD~ 152 (309)
..+++.+++.++.+++++.+|||++-.||.+.+.+.+.+.|.........++......+..+. +...+ ++.+|++|-+
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~-P~i~~~~~~~Le~GMv 363 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEV-PFVSTQATETFCPGMV 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcC-CCcCCCCCCccCCCCE
Confidence 456788888999999999999999999999999999999886432111112211111333332 22222 4678999999
Q ss_pred EEEEEeeEeCc-EEeeeeeEEEccC
Q 021683 153 INIDVTVYLNG-YHGDTSATFFCGD 176 (309)
Q Consensus 153 v~id~g~~~~G-y~~d~~rt~~vG~ 176 (309)
+.++.+.+..| .-.-+..|++|.+
T Consensus 364 ~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 364 LSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred EEECCceeecCCCEEEEeeEEEECC
Confidence 99997766544 3345788998843
No 55
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.76 E-value=0.019 Score=52.28 Aligned_cols=86 Identities=19% Similarity=0.198 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc--cccCCC-CCCcCCCC
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIP-DSRALEDG 150 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~--~~h~~p-~~~~l~~G 150 (309)
..|++..++.++++.+.+.++||++-.||...+.+.+.+.|.... ..+.|+ .+.....+. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGH--GVGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccC--CcCccccCCCcccCcCCCCCCEeCCC
Confidence 357788889999999999999999999999999999999886532 112222 222222221 222222 24679999
Q ss_pred CEEEEEEeeEeC
Q 021683 151 DTINIDVTVYLN 162 (309)
Q Consensus 151 D~v~id~g~~~~ 162 (309)
.++.|+-+.+..
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999877654
No 56
>PRK09795 aminopeptidase; Provisional
Probab=96.76 E-value=0.026 Score=52.98 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCC-CCCc
Q 021683 68 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRA 146 (309)
Q Consensus 68 s~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p-~~~~ 146 (309)
.+++-+.++++.+++.++.+++.+.++||++-.||++.+.+.+.+.|....... +....+.....+. +.-.| ++.+
T Consensus 235 ~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h--~~GHgiGl~~he~-p~i~~~~~~~ 311 (361)
T PRK09795 235 VSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGH--NTGHAIGIEVHED-PRFSPRDTTT 311 (361)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCC--CCCccCCccccCC-CCcCCCCCCC
Confidence 355556688899999999999999999999999999999999999886432111 1111222222111 11112 4688
Q ss_pred CCCCCEEEEEEeeEeCcE-EeeeeeEEEcc
Q 021683 147 LEDGDTINIDVTVYLNGY-HGDTSATFFCG 175 (309)
Q Consensus 147 l~~GD~v~id~g~~~~Gy-~~d~~rt~~vG 175 (309)
|++|.++.|+-+.+..|+ -.-+..|++|.
T Consensus 312 l~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred cCCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 999999999999886553 34567888884
No 57
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.76 E-value=0.022 Score=48.78 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH-HHhCCCcccCCcceecccccCCCCCccccCCCCCCcccCCCcE
Q 021683 180 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH-ADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQT 258 (309)
Q Consensus 180 ~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~-~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~Gmv 258 (309)
..|++.+.+.+++.++++.++||++-.||...+.+. +.+.|........-=+.|. ...+.++.+ ++.+|++|++
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~----~~~~~~~~~-~~~~l~~gd~ 76 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGP----NTDLPHYTP-TDRRLQEGDI 76 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECC----CCGETTTBC-CSSBESTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCC----cceecceec-cceeeecCCc
Confidence 568889999999999999999999999999999988 6777744211111111221 122334433 4678999999
Q ss_pred EEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEc
Q 021683 259 FTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 299 (309)
Q Consensus 259 ftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt 299 (309)
+.++-+.... ++.+-+.-|+++.
T Consensus 77 v~id~~~~~~------------------gy~~d~~Rt~~~G 99 (207)
T PF00557_consen 77 VIIDFGPRYD------------------GYHADIARTFVVG 99 (207)
T ss_dssp EEEEEEEEET------------------TEEEEEEEEEESS
T ss_pred ceeeccceee------------------eeEeeeeeEEEEe
Confidence 9999988652 4667788888764
No 58
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.72 E-value=0.032 Score=48.95 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccC------CCCCCcCC
Q 021683 75 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG------IPDSRALE 148 (309)
Q Consensus 75 ~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~------~p~~~~l~ 148 (309)
.|++..++.++++.+.+.++||++-.||++.+.+.+.++|...... +++...+....++. +|. ..++.+|+
T Consensus 111 ~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~Le 187 (228)
T cd01090 111 HLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVLE 187 (228)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCccC
Confidence 5788889999999999999999999999999999999998654211 11222222222221 111 11358899
Q ss_pred CCCEEEEEEeeEeC----c-EEeeeeeEEEccC
Q 021683 149 DGDTINIDVTVYLN----G-YHGDTSATFFCGD 176 (309)
Q Consensus 149 ~GD~v~id~g~~~~----G-y~~d~~rt~~vG~ 176 (309)
+|.++.++-+.++. | .-.-+..|++|.+
T Consensus 188 ~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 188 PGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 99999999988762 3 2234788888854
No 59
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.69 E-value=0.027 Score=53.44 Aligned_cols=103 Identities=14% Similarity=0.203 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCC--cceecccc--cCCCCCccccCCC--C-CCcc
Q 021683 180 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIGR--VFHADPVVLHYRN--N-DHGR 252 (309)
Q Consensus 180 ~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~--~~GHgiG~--~~he~p~i~~~~~--~-~~~~ 252 (309)
.++++-+.+.++++.+++.++||++..||.+.+.+.+++.+-..... -..+|++. .+--...+.|+.+ + ++.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~~~d~~~~ 100 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYI 100 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCCCCCCCcC
Confidence 35667777788888899999999999999999988888754211110 00112111 0001123444433 2 2478
Q ss_pred cCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 253 MVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 253 l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
|++|.++.|+.+... .++.+-+.+|+.|.+
T Consensus 101 Lk~GDvVkIDlG~~i------------------dGY~aD~arTv~vG~ 130 (389)
T TIGR00495 101 LKEGDVVKIDLGCHI------------------DGFIALVAHTFVVGV 130 (389)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEECC
Confidence 999999999999876 247788899999974
No 60
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.67 E-value=0.038 Score=50.32 Aligned_cols=97 Identities=21% Similarity=0.189 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCc-----ccccC-CCCCCcC
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-----CICHG-IPDSRAL 147 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~-----~~~h~-~p~~~~l 147 (309)
..+++.+.+.++++.+.+.++||++..||.+.+++.+.+.|..+. .+..|+. +|.+. .++.. ..++.+|
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~~~he~p~ip~~~~~~~~~l 176 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERYELHAGPSIPNYDEGGGVKL 176 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCCcccCCCccCccCCCCCcee
Confidence 456788888899999999999999999999999999999998763 2222221 12110 11111 1236789
Q ss_pred CCCCEEEEEEeeE-eCcEEeeeeeEEEcc
Q 021683 148 EDGDTINIDVTVY-LNGYHGDTSATFFCG 175 (309)
Q Consensus 148 ~~GD~v~id~g~~-~~Gy~~d~~rt~~vG 175 (309)
++|.++.|+.... -.|+..+..+|-+..
T Consensus 177 e~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 177 EEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred CCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 9999999998765 478888888887774
No 61
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.63 E-value=0.027 Score=49.68 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcC----Ccc------------CCCCCCCCCCceeecCCccc
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG----AYP------------SPLGYGGFPKSVCTSVNECI 137 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g----~~p------------~~~~~~~fp~~v~~g~n~~~ 137 (309)
..+++...+.++++.+.+.++||++-.||.+.+.+.+.+.+ ..+ .....+++...+.....+ .
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-V 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-C
Confidence 45677888899999999999999999999999998887653 211 111111122222222222 1
Q ss_pred ccC--CC-CCCcCCCCCEEEEEEeeEeCc-----------EEeeeeeEEEccC
Q 021683 138 CHG--IP-DSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCGD 176 (309)
Q Consensus 138 ~h~--~p-~~~~l~~GD~v~id~g~~~~G-----------y~~d~~rt~~vG~ 176 (309)
++. .| ++.+|++|-++.+..+.+..+ +-.-+..|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 211 23 467899999999999988654 5666788898843
No 62
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.62 E-value=0.023 Score=51.63 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcc--cccC-CC-CCCcCCC
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 149 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~--~~h~-~p-~~~~l~~ 149 (309)
..|++.+++.++++++++.++||++-.||++.+.+.+.++|... ...+.|+ .+.....+. +++. .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECC
Confidence 35789999999999999999999999999999999998877643 2222222 122222221 1221 12 3568999
Q ss_pred CCEEEEEEeeEe
Q 021683 150 GDTINIDVTVYL 161 (309)
Q Consensus 150 GD~v~id~g~~~ 161 (309)
|.++.|.-+...
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999988864
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.45 E-value=0.058 Score=49.24 Aligned_cols=96 Identities=10% Similarity=0.130 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccCCC--CCCcccCCCc
Q 021683 180 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLNQ 257 (309)
Q Consensus 180 ~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~--~~~~~l~~Gm 257 (309)
..+++-+.+.++++.+++.++||++..||...+++.+.+.|... .|- ..+.. .....|+.+ +++.+|++|.
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~--aFp-~~vs~----n~~~~H~~p~~~d~~~l~~GD 79 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP--AFP-CNISI----NECAAHFTPKAGDKTVFKDGD 79 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC--CCC-cceec----CCEeeCCCCCCCcCccCCCCC
Confidence 46777888889999999999999999999999999999988652 220 01111 111223222 2456899999
Q ss_pred EEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 258 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 258 vftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
++.|+.+... .++.+-+..|+.+.+
T Consensus 80 vV~iD~G~~~------------------dGY~aD~arT~~vG~ 104 (295)
T TIGR00501 80 VVKLDLGAHV------------------DGYIADTAITVDLGD 104 (295)
T ss_pred EEEEEEeEEE------------------CCEEEEEEEEEEeCc
Confidence 9999998865 236777888888864
No 64
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.26 E-value=0.098 Score=45.75 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCC--cceeccccc--CCCCCccccCCC---CCCcc
Q 021683 180 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIGRV--FHADPVVLHYRN---NDHGR 252 (309)
Q Consensus 180 ~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~--~~GHgiG~~--~he~p~i~~~~~---~~~~~ 252 (309)
..+++.+.+.++++.+++.++||++-.||..++++.+.+..-...+. ....+++.. .--...+.|+.+ .++.+
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~~~ 82 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDATYT 82 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCCcc
Confidence 56788899999999999999999999999888777777732211111 001111100 000111223221 25678
Q ss_pred cCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcC
Q 021683 253 MVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 300 (309)
Q Consensus 253 l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~ 300 (309)
|++|+++.++.+... .++.+-+..|+.|.+
T Consensus 83 l~~Gd~v~iD~g~~~------------------~GY~sD~tRT~~vG~ 112 (228)
T cd01089 83 LKDGDVVKIDLGCHI------------------DGYIAVVAHTIVVGA 112 (228)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEeCC
Confidence 999999999998765 246788889998864
No 65
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=95.54 E-value=0.15 Score=49.39 Aligned_cols=96 Identities=17% Similarity=0.207 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh----CCCcccCCcceecccccCCCCCccccCCCC--CCcccC
Q 021683 181 ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR----YNYGVVRQFVGHGIGRVFHADPVVLHYRNN--DHGRMV 254 (309)
Q Consensus 181 ~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~----~G~~~~~~~~GHgiG~~~he~p~i~~~~~~--~~~~l~ 254 (309)
++++-+.+.++++.+.+.++||++..||...+++.+++ .|...-..| --+++.. -..+|+.++ ++.+|+
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aF-Pt~vS~N----~~aaH~tP~~gd~~vLk 235 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAF-PTGCSLN----HCAAHYTPNTGDKTVLT 235 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCC-CceeecC----ccccCCCCCCCCCcEec
Confidence 45666667778888888999999999999987775544 343210112 0122221 112344332 467899
Q ss_pred CCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEc
Q 021683 255 LNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 299 (309)
Q Consensus 255 ~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt 299 (309)
+|.++.|+.+... .++.+-+..|+.+.
T Consensus 236 ~GDvVkID~G~~v------------------dGYiaD~ArTv~vg 262 (470)
T PTZ00053 236 YDDVCKLDFGTHV------------------NGRIIDCAFTVAFN 262 (470)
T ss_pred CCCeEEEEEeEEE------------------CCEEEeEEEEEEeC
Confidence 9999999999865 23567777888774
No 66
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=95.45 E-value=0.19 Score=47.60 Aligned_cols=100 Identities=24% Similarity=0.240 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCcee--ecCCcccccCCC-CCCcCCCCC
Q 021683 75 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALEDGD 151 (309)
Q Consensus 75 ~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~--~g~n~~~~h~~p-~~~~l~~GD 151 (309)
.|+...++.++.+++.++++||+|-.|+++.+.+.+.+.|...... +++...+. ..+.+.-....| ++.+|++|-
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCccccCCCCcccCcCccccCCCCCccccCCc
Confidence 3578889999999999999999999999999999999976533211 11222222 111111101112 477899999
Q ss_pred EEEEEEeeEe-CcEEeeeeeEEEccC
Q 021683 152 TINIDVTVYL-NGYHGDTSATFFCGD 176 (309)
Q Consensus 152 ~v~id~g~~~-~Gy~~d~~rt~~vG~ 176 (309)
++.++-+.++ +.+-.-+..+++|.+
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEEcC
Confidence 9999999775 558889999999965
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=95.00 E-value=0.34 Score=46.78 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHH----HcCCccCC-------CCCC-CCCCce----eecCCcccc
Q 021683 75 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP-------LGYG-GFPKSV----CTSVNECIC 138 (309)
Q Consensus 75 ~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~----~~g~~p~~-------~~~~-~fp~~v----~~g~n~~~~ 138 (309)
.|++..++.++.+++.+.++||++-.+|...+.+.+. +.|..+.. ..+. .|+..+ .....+. +
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~-~ 362 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDV-G 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcC-C
Confidence 4677778888999999999999999999888775543 33432100 0000 122222 2222221 1
Q ss_pred cCCC-CCCcCCCCCEEEEEEeeEeC----------cEEeeeeeEEEccC
Q 021683 139 HGIP-DSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCGD 176 (309)
Q Consensus 139 h~~p-~~~~l~~GD~v~id~g~~~~----------Gy~~d~~rt~~vG~ 176 (309)
+..+ ++++|++|-++.|+-|.++. |+-.-+..|++|.+
T Consensus 363 ~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~ 411 (438)
T PRK10879 363 VYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITE 411 (438)
T ss_pred CcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECC
Confidence 2212 35789999999999998753 46667888998853
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=92.87 E-value=2.5 Score=36.89 Aligned_cols=96 Identities=16% Similarity=0.094 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHhhhC-CCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCcee--ecCCcc--cccCCCCCCcCCCC
Q 021683 76 RVSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALEDG 150 (309)
Q Consensus 76 r~A~~i~~~~l~~~~~~i-~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~--~g~n~~--~~h~~p~~~~l~~G 150 (309)
|++..++.++..++.+.+ +||++-.++++.+.+.+.+.|.+.. ...|+ .+. ....+. +.+...++++|++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GH--gIG~~l~~hE~P~i~~~~~~~~~L~~G 189 (224)
T cd01085 114 KRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGH--GVGSFLNVHEGPQSISPAPNNVPLKAG 189 (224)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCC--CCCCCCcCCCCCCcCCcCCCCCCcCCC
Confidence 344445556666666666 5999999999999999988876311 00111 222 112221 11011245789999
Q ss_pred CEEEEEEeeEeC-cEEeeeeeEEEcc
Q 021683 151 DTINIDVTVYLN-GYHGDTSATFFCG 175 (309)
Q Consensus 151 D~v~id~g~~~~-Gy~~d~~rt~~vG 175 (309)
.++.|+-+.+.. .+..-+..|++|.
T Consensus 190 mvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 190 MILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 999999999864 3556688888884
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=92.37 E-value=1.6 Score=42.28 Aligned_cols=88 Identities=18% Similarity=0.187 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHH----HHcCCccC-------CCCC--CCCCCc----eeecCCcccc
Q 021683 76 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGY--GGFPKS----VCTSVNECIC 138 (309)
Q Consensus 76 r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~----~~~g~~p~-------~~~~--~~fp~~----v~~g~n~~~~ 138 (309)
++...++.++.+++.+.++||++-.||...+++.+ .+.|.... ..++ ..||.. +...+.+.-.
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~ 350 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAG 350 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCC
Confidence 46788899999999999999999999998877554 44544321 0011 012222 2222222210
Q ss_pred c----------------CCCCCCcCCCCCEEEEEEeeEeCc
Q 021683 139 H----------------GIPDSRALEDGDTINIDVTVYLNG 163 (309)
Q Consensus 139 h----------------~~p~~~~l~~GD~v~id~g~~~~G 163 (309)
+ ..-..++|++|.+++|+-|+++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 351 FMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred cccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 0 011357899999999999998764
No 70
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=89.58 E-value=3.5 Score=38.23 Aligned_cols=92 Identities=17% Similarity=0.283 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH--------HHHh-C----CCcc-----cCCcceecccccCCCCCcc
Q 021683 181 ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD--------HADR-Y----NYGV-----VRQFVGHGIGRVFHADPVV 242 (309)
Q Consensus 181 ~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~--------~~~~-~----G~~~-----~~~~~GHgiG~~~he~p~i 242 (309)
.+.+-+.+..++...++.|+||++..||-....+ ++++ . |... +.+..+| -.|..
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~h-------~sPlk 96 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVCH-------FSPLK 96 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceeec-------cCcCC
Confidence 4555667778888888999999999888654433 3333 1 2210 1222222 33433
Q ss_pred ccCCCCCCcccCCCcEEEEcceeecCCCCCcccCCCceeeeeCCceeEEEEEEEEEcCC
Q 021683 243 LHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRD 301 (309)
Q Consensus 243 ~~~~~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~~~dg~~~~~~EdtvlVt~~ 301 (309)
++.+.+|++|.++-|.-++.. | ++.+-..||++|++.
T Consensus 97 ----sd~~~~Lk~GDvVKIdLG~Hi---------D---------GfiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 97 ----SDADYTLKEGDVVKIDLGVHI---------D---------GFIALVAHTIVVGPA 133 (398)
T ss_pred ----CCCcccccCCCEEEEEeeeee---------c---------cceeeeeeeEEeccC
Confidence 234679999999999999876 2 367889999999864
No 71
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=75.85 E-value=12 Score=38.19 Aligned_cols=97 Identities=20% Similarity=0.250 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeec------CCcccccCCCCCCcCC
Q 021683 75 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTS------VNECICHGIPDSRALE 148 (309)
Q Consensus 75 ~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g------~n~~~~h~~p~~~~l~ 148 (309)
|.++....-.+.+++...++||..-.+|...+...+.+.+-+-.+ .|.+.+.+| .++.+ -..-++++|+
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~----~~~k~lG~~iGlEFREssl~-inaKnd~~lk 333 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVP----NFTKNLGFGIGLEFRESSLV-INAKNDRVLK 333 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhh----hhhhhcccccceeeeccccc-ccccchhhhc
Confidence 467777777888888999999999999999999999987743211 133332221 11111 1223569999
Q ss_pred CCCEEEEEEeeE-------eCcEEeeeeeEEEccC
Q 021683 149 DGDTINIDVTVY-------LNGYHGDTSATFFCGD 176 (309)
Q Consensus 149 ~GD~v~id~g~~-------~~Gy~~d~~rt~~vG~ 176 (309)
+|.+++|.+|.. .+-|.--++-|+.||+
T Consensus 334 ~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 334 KGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred cCcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 999999999863 2447777899999986
No 72
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=74.88 E-value=35 Score=31.15 Aligned_cols=83 Identities=19% Similarity=0.308 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH----hCCCcccCCcceecccccC-CCCCccccCC--CCCCc
Q 021683 179 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD----RYNYGVVRQFVGHGIGRVF-HADPVVLHYR--NNDHG 251 (309)
Q Consensus 179 ~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~----~~G~~~~~~~~GHgiG~~~-he~p~i~~~~--~~~~~ 251 (309)
.+.++..++-+++...+.+.+|||+++-||-+.+++..+ +.|.. .-.|...|..+ |. -+||. .++.+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~c---AAHyTpNaGd~t 159 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHC---AAHYTPNAGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccch---hhhcCCCCCCce
Confidence 345566666677778888899999999999888766544 45553 22344444432 11 12332 23668
Q ss_pred ccCCCcEEEEcceeec
Q 021683 252 RMVLNQTFTIEPMLTI 267 (309)
Q Consensus 252 ~l~~GmvftiEp~i~~ 267 (309)
+|+.+.|.-|.-+...
T Consensus 160 VLqydDV~KiDfGthi 175 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHI 175 (397)
T ss_pred eeeecceEEEeccccc
Confidence 9999999999877654
No 73
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=70.47 E-value=40 Score=28.46 Aligned_cols=75 Identities=15% Similarity=0.252 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccCCCCCCcccCCCc
Q 021683 178 DDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 257 (309)
Q Consensus 178 ~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~l~~Gm 257 (309)
.+|++...+.+.+-+.+.+...-|..+..+.-+.+++.+.+. =+ .+|.-|-+|-- .+|.. .++ +.|+
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~g-k~--~~yy~q~~GAi----RYVva-d~g-----ekgl 180 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKG-KG--SRYYSQTEGAI----RYVVA-DNG-----EKGL 180 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcC-CC--CcceeeccCce----EEEEe-cCC-----Ccee
Confidence 367777778888888888899999999999999999988874 33 55666776642 23332 122 6899
Q ss_pred EEEEccee
Q 021683 258 TFTIEPML 265 (309)
Q Consensus 258 vftiEp~i 265 (309)
+|+|||.=
T Consensus 181 TFAVEPIK 188 (200)
T PF07305_consen 181 TFAVEPIK 188 (200)
T ss_pred EEEeeeee
Confidence 99999974
No 74
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=68.75 E-value=16 Score=25.99 Aligned_cols=52 Identities=17% Similarity=0.304 Sum_probs=32.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCc-ccccCCCCCCcCCCCCEEEE
Q 021683 93 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 155 (309)
Q Consensus 93 i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~-~~~h~~p~~~~l~~GD~v~i 155 (309)
++.|.|-.|++..++..+.+.=.+. ...|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 4668999999999997776532221 1122111 11123456789999999986
No 75
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=62.10 E-value=15 Score=26.80 Aligned_cols=51 Identities=29% Similarity=0.275 Sum_probs=36.0
Q ss_pred CCcCCCCCEEEEEEeeEe-CcEEeeee------eEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 021683 144 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 203 (309)
Q Consensus 144 ~~~l~~GD~v~id~g~~~-~Gy~~d~~------rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~ 203 (309)
.+..+.||.|.|++.++. +|-.-|.+ .+|.+|.- ....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 356789999999999987 88777777 67777751 13345566666666664
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=52.42 E-value=56 Score=32.95 Aligned_cols=81 Identities=21% Similarity=0.250 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceee--cCCcc---cccCCCCC
Q 021683 70 KGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT--SVNEC---ICHGIPDS 144 (309)
Q Consensus 70 ~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~--g~n~~---~~h~~p~~ 144 (309)
+....|.-+-. .-+.....++||.+-.+|...+...+.+.|-+-.+ .|-..+.. |.... .+...-++
T Consensus 299 e~~~Ny~fl~~----lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~ 370 (1001)
T COG5406 299 EQQKNYEFLYM----LQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNG 370 (1001)
T ss_pred HhhhhHHHHHH----HHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCC
Confidence 33444544443 34455568999999999999999999988753221 13222222 22211 11122356
Q ss_pred CcCCCCCEEEEEEe
Q 021683 145 RALEDGDTINIDVT 158 (309)
Q Consensus 145 ~~l~~GD~v~id~g 158 (309)
|+||.|++++|.+|
T Consensus 371 r~lq~g~~fnis~g 384 (1001)
T COG5406 371 RVLQAGCIFNISLG 384 (1001)
T ss_pred ceeccccEEEEeec
Confidence 99999999999985
No 77
>PRK01490 tig trigger factor; Provisional
Probab=51.16 E-value=51 Score=31.69 Aligned_cols=45 Identities=22% Similarity=0.454 Sum_probs=33.2
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCCEEEEEEeeEeCcEE
Q 021683 97 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYH 165 (309)
Q Consensus 97 ~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD~v~id~g~~~~Gy~ 165 (309)
+|+.+|+..+.+....++-+- +.+++++.||.|.+|+....+|-.
T Consensus 132 vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~ 176 (435)
T PRK01490 132 VTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEE 176 (435)
T ss_pred CCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEE
Confidence 688888888887776544321 223668999999999998887744
No 78
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=48.88 E-value=20 Score=25.76 Aligned_cols=39 Identities=18% Similarity=0.231 Sum_probs=29.1
Q ss_pred cHHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccC
Q 021683 204 EYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY 245 (309)
Q Consensus 204 ~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~ 245 (309)
...++-..+.+.+++.||.++.+..|+-+-- ++-+|..+
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnPinQivGYllSG---DPaYItsh 54 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNPINQIVGYLLSG---DPAYITSH 54 (79)
T ss_pred hHHHHHHHHHHHHHHcCCChHHHHHhheecC---CCccccCc
Confidence 4567777788889999999988988887652 44556554
No 79
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=47.06 E-value=63 Score=30.70 Aligned_cols=47 Identities=26% Similarity=0.542 Sum_probs=34.3
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCC-CCCcCCCCCEEEEEEeeEeCcEEee
Q 021683 97 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNGYHGD 167 (309)
Q Consensus 97 ~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p-~~~~l~~GD~v~id~g~~~~Gy~~d 167 (309)
+|+.+|++.+.+....++-+- | .+++++.||.|.+|+....+|=..+
T Consensus 120 vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~~gD~V~v~~~~~~dg~~~~ 167 (408)
T TIGR00115 120 VTDEDVDEELEKLREQNATLV------------------------PVERRAAEKGDRVTIDFEGFIDGEAFE 167 (408)
T ss_pred CCHHHHHHHHHHHHHhCCccc------------------------cccccccCCCCEEEEEEEEEECCEECc
Confidence 688889988888777655321 1 2357899999999998877775443
No 80
>PRK05473 hypothetical protein; Provisional
Probab=43.46 E-value=27 Score=25.47 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCCCcccCCcceecccccCCCCCccccC
Q 021683 205 YKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY 245 (309)
Q Consensus 205 ~~~i~~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~i~~~ 245 (309)
.+++-..+.+.+++.||.++.+.+|+-+-- ++-+|..+
T Consensus 20 v~eiL~~Vy~AL~EKGYNPinQiVGYllSG---DPaYItsh 57 (86)
T PRK05473 20 VREILTTVYDALEEKGYNPINQIVGYLLSG---DPAYIPRH 57 (86)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHhhhccC---CCCccCCc
Confidence 556667778888999999988988887653 44456554
No 81
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=43.19 E-value=38 Score=24.12 Aligned_cols=47 Identities=17% Similarity=0.156 Sum_probs=30.5
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCCEEEE
Q 021683 93 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 155 (309)
Q Consensus 93 i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD~v~i 155 (309)
++.|.|-.|++..+|..+.+.=.+ .+-.+ ......+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~-----------A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIE-----------AVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEE-----------EEEcc-----CEEECCCEEecCCCEEEE
Confidence 456889999999999766542222 11122 122345678999999987
No 82
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=43.18 E-value=41 Score=19.99 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHH
Q 021683 78 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 111 (309)
Q Consensus 78 A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~ 111 (309)
.|.++..++..+.+.+....|+.+|...+.+.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4677888899999999999999999999988764
No 83
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=42.49 E-value=96 Score=28.84 Aligned_cols=52 Identities=13% Similarity=0.270 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccC
Q 021683 67 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 118 (309)
Q Consensus 67 Ks~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~ 118 (309)
-|+.||+.+-++-..-...+......+-|..+..+|...++..+.+.-+.|+
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT 148 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT 148 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 4889999999999999999999999999999999999999999998877765
No 84
>COG3589 Uncharacterized conserved protein [Function unknown]
Probab=41.28 E-value=23 Score=32.84 Aligned_cols=132 Identities=12% Similarity=0.088 Sum_probs=65.3
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCC
Q 021683 65 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 144 (309)
Q Consensus 65 ~iKs~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~ 144 (309)
..-|++|+. ++.+.-..-+....-.+.+++++.|++-.+......+|-.+..+--.-++...|-.. ..-.| +.
T Consensus 224 ~~~seeelr---~~sq~~n~~~~~i~v~~~~~~~~~e~~~l~~~~H~~R~D~~~yviRSt~~R~~~~~~-~fp~~---~~ 296 (360)
T COG3589 224 QFPSEEELR---AVSQAFNRNITEIKVVVIEDITEVELAILFEPEHFNRGDISEYVIRSTMSRVTYKQK-IFPAH---DT 296 (360)
T ss_pred CCCCHHHHH---HHHHHHhcccceeEEEEeccchhhHHHHHhhhhhhccCChHHHHHhhcccccccccc-ccccc---Cc
Confidence 456788774 444444555555566677899999999887775555553221000000111111100 00011 12
Q ss_pred CcCCCCCEEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Q 021683 145 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYK 206 (309)
Q Consensus 145 ~~l~~GD~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ 206 (309)
...+.||+..=+. .|.+|.+.+.=+.-- =+......++....+=-...++.++||.+++
T Consensus 297 ~~~kkG~ItIDN~--~ygrY~GE~QIa~k~-~~~~~~vNVVa~I~~edl~LLd~i~Pw~~F~ 355 (360)
T COG3589 297 NERKKGSITIDNL--GYGRYKGELQIALKN-LENDGKVNVVANIIKEDLYLLDFIEPWQKFK 355 (360)
T ss_pred cceeeeeEEEecC--CcccccceEEeeehh-CcccccchhhhhccHhhhhHHHhcCCCCcee
Confidence 4456776554322 366666665422211 0122223334444444455677889988764
No 85
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=40.77 E-value=1e+02 Score=28.76 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccC
Q 021683 67 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 118 (309)
Q Consensus 67 Ks~~EI~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~ 118 (309)
-|+.||+.+-++-..-...+......+-|..+..|+...++..+.+.-+.|+
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT 154 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT 154 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 4889999999999999999999999999999999999999999998877764
No 86
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=38.25 E-value=27 Score=25.27 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCC
Q 021683 80 RLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 115 (309)
Q Consensus 80 ~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~ 115 (309)
.++..+...+.+..+.++|+.+|...+...+.+.+.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344444444444444499999999999999997774
No 87
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=35.80 E-value=90 Score=21.81 Aligned_cols=42 Identities=12% Similarity=0.323 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 021683 177 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 218 (309)
Q Consensus 177 ~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~~~~~~ 218 (309)
.+.+++.+.+.+.+.+..+++.++.|.+..=+..-++..++.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 478899999999999999999999998766555555554444
No 88
>PRK05423 hypothetical protein; Provisional
Probab=32.15 E-value=69 Score=23.85 Aligned_cols=28 Identities=29% Similarity=0.567 Sum_probs=23.4
Q ss_pred HHHHHhhhCCCCCcHHHHHHHHHHHHHH
Q 021683 85 VLEYAGTLVKPGITTDEIDKAVHQMIID 112 (309)
Q Consensus 85 ~l~~~~~~i~pG~te~ei~~~~~~~~~~ 112 (309)
.++.+...|+|+||..||.+++..+-.+
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~D 71 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKSD 71 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhh
Confidence 5677888999999999999998876544
No 89
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=30.96 E-value=1e+02 Score=23.12 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=48.1
Q ss_pred EEEEEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCC-------CcHHHHHHHHHHHHHhCCC
Q 021683 152 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPG-------MEYKKIGKTIQDHADRYNY 221 (309)
Q Consensus 152 ~v~id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG-------~~~~~i~~~~~~~~~~~G~ 221 (309)
-...|+.....+|- .+++.+.+-+ ..+.++.++...+.....+..+--| ++-.+..+.+.+.+++.||
T Consensus 22 g~V~DV~veHp~YG-~i~~~L~i~s-r~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~ 96 (98)
T PF02829_consen 22 GRVLDVIVEHPVYG-EITGNLNISS-RRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGF 96 (98)
T ss_dssp -EEEEEEEEETTTE-EEEEEEEE-S-HHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-
T ss_pred CEEEEEEEeCCCCc-EEEEEEecCC-HHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCC
Confidence 34458999999887 9999999943 5667777777777766677777666 3456788999999999997
No 90
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=28.76 E-value=2.4e+02 Score=20.76 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHH
Q 021683 74 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID 112 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~ 112 (309)
.+|.-.+-+. .|+.+...|+|+||-.||.+++..+-.+
T Consensus 27 KIRDNqKRV~-LLdNL~~YI~~~Ms~edi~~II~nMr~D 64 (95)
T PF04363_consen 27 KIRDNQKRVL-LLDNLSDYIKPDMSIEDIRAIIENMRSD 64 (95)
T ss_pred HHhhhHHHHH-HHHHHHHHccCCCCHHHHHHHHHHHHhH
Confidence 3454444444 3788899999999999999988876543
No 91
>PF11020 DUF2610: Domain of unknown function (DUF2610); InterPro: IPR021277 This family is conserved in Proteobacteria. One member is annotated as being elongation factor P but this could not be confirmed.
Probab=27.48 E-value=99 Score=22.27 Aligned_cols=70 Identities=11% Similarity=0.143 Sum_probs=44.4
Q ss_pred EEEeeEeCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH---HHHHhCCCcccCCcceec
Q 021683 155 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ---DHADRYNYGVVRQFVGHG 231 (309)
Q Consensus 155 id~g~~~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~~i~~~~~---~~~~~~G~~~~~~~~GHg 231 (309)
+.+.+.+.|-.+-++ +++|+|.+..--+ .-+..++..-|-|.--.+|.+++. +.++++|.+. ..+|-+.
T Consensus 4 F~i~C~Fggq~a~F~--iYIG~P~~~~HPl-----~~Q~~WLskeRgG~IP~~V~~sl~kL~~La~~N~v~f-eeLc~YA 75 (82)
T PF11020_consen 4 FVIPCDFGGQRAPFA--IYIGEPKPDHHPL-----QFQATWLSKERGGQIPEKVMDSLSKLYKLAKENNVSF-EELCVYA 75 (82)
T ss_pred eEeCCccCCccCcee--EEeCCCCCCCCch-----HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHcCCCH-HHHHHHH
Confidence 355666777766655 9999876655443 346677788888887777776654 4456666543 3444333
Q ss_pred c
Q 021683 232 I 232 (309)
Q Consensus 232 i 232 (309)
+
T Consensus 76 L 76 (82)
T PF11020_consen 76 L 76 (82)
T ss_pred H
Confidence 3
No 92
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=27.00 E-value=1.6e+02 Score=24.66 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=35.8
Q ss_pred CCCcCCCCCEEEEEEeeE-eCcEEeeeee-----EEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021683 143 DSRALEDGDTINIDVTVY-LNGYHGDTSA-----TFFCGDVDDEARNLVKVTKDCLHKAISVCAPGME 204 (309)
Q Consensus 143 ~~~~l~~GD~v~id~g~~-~~Gy~~d~~r-----t~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~ 204 (309)
+....+.||.|.+..... .+|-.-|.++ +|.+|. .....+++.++..+++|-+
T Consensus 82 ~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~---------~~vi~Gl~e~L~~Mk~Ge~ 140 (177)
T TIGR03516 82 EGTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQ---------QDLFSGLRDGLKLMKEGET 140 (177)
T ss_pred CCCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCC---------cchhHHHHHHHcCCCCCCE
Confidence 334568999999998776 5676555553 566664 1245667777777888764
No 93
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=26.84 E-value=49 Score=22.79 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=14.2
Q ss_pred HHhhhCCCCCcHHHHHHHH
Q 021683 88 YAGTLVKPGITTDEIDKAV 106 (309)
Q Consensus 88 ~~~~~i~pG~te~ei~~~~ 106 (309)
...+.|++|||..|+.+++
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 4567899999999988654
No 94
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=26.79 E-value=4e+02 Score=25.68 Aligned_cols=107 Identities=15% Similarity=0.171 Sum_probs=61.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhCCC--CCcHHHHHH----HHHHHHHHcCCccCCC-----CCCCCCCcee--ec
Q 021683 66 VHDEKGIECMRVSGRLAAQVLEYAGTLVKP--GITTDEIDK----AVHQMIIDNGAYPSPL-----GYGGFPKSVC--TS 132 (309)
Q Consensus 66 iKs~~EI~~~r~A~~i~~~~l~~~~~~i~p--G~te~ei~~----~~~~~~~~~g~~p~~~-----~~~~fp~~v~--~g 132 (309)
.-|+.+.+.+...-.+-+ ++.+.++| |.|-.+|-. ++.+.+.+.|...+.- .+.-+|..|. .|
T Consensus 334 kFs~~Qr~LYeavL~vq~----ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLG 409 (488)
T KOG2414|consen 334 KFSDAQRDLYEAVLQVQE----ECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLG 409 (488)
T ss_pred ccCcHHHHHHHHHHHHHH----HHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcC
Confidence 446777777766555544 45556667 888887754 4556667777543311 1122344322 12
Q ss_pred CCcccccCCCCCCcCCCCCEEEEEEeeE----------eCcEEeeeeeEEEccC
Q 021683 133 VNECICHGIPDSRALEDGDTINIDVTVY----------LNGYHGDTSATFFCGD 176 (309)
Q Consensus 133 ~n~~~~h~~p~~~~l~~GD~v~id~g~~----------~~Gy~~d~~rt~~vG~ 176 (309)
-+--.|.-.|.+.+|++|-+++|+-|++ +.|.-.-+-.-+.+|+
T Consensus 410 mDVHD~p~v~r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~e 463 (488)
T KOG2414|consen 410 MDVHDCPTVSRDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGE 463 (488)
T ss_pred cccccCCCCCCCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEecc
Confidence 1111112234588999999999998874 3455555666677765
No 95
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=26.35 E-value=1.5e+02 Score=28.72 Aligned_cols=44 Identities=23% Similarity=0.410 Sum_probs=29.4
Q ss_pred CcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCCEEEEEEeeEeCcE
Q 021683 97 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGY 164 (309)
Q Consensus 97 ~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD~v~id~g~~~~Gy 164 (309)
+|+.||+..+......+.-+ .|.++.++.||.|+||+.+..+|=
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 56777777777655543321 122223899999999999887764
No 96
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=26.07 E-value=1.7e+02 Score=26.46 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=49.0
Q ss_pred eCcEEeeeeeEEEccCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH-HHHHHHHHHHHHhCCCc
Q 021683 161 LNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY-KKIGKTIQDHADRYNYG 222 (309)
Q Consensus 161 ~~Gy~~d~~rt~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~-~~i~~~~~~~~~~~G~~ 222 (309)
-+|. +-.+|..++ ++++++..-...+++.++-+.+.-|... .+|-+++.+.+++.++.
T Consensus 181 ~DGL-A~SSRN~YL---s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~~~ 239 (285)
T COG0414 181 EDGL-ALSSRNVYL---SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAGFV 239 (285)
T ss_pred CCcc-chhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCC
Confidence 4666 567888887 8899999999999999999999999876 89999999999977763
No 97
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=26.06 E-value=1.9e+02 Score=23.62 Aligned_cols=38 Identities=8% Similarity=0.033 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCc
Q 021683 79 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY 116 (309)
Q Consensus 79 ~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~ 116 (309)
..++..+...+.......+|..||...+.+.|.+.|-.
T Consensus 85 ~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~ 122 (154)
T PRK00464 85 EAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEV 122 (154)
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCE
Confidence 34455555555555556899999999999999998854
No 98
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=25.54 E-value=1.7e+02 Score=20.76 Aligned_cols=48 Identities=21% Similarity=0.277 Sum_probs=30.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCceeecCCcccccCCCCCCcCCCCCEEEE
Q 021683 93 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 155 (309)
Q Consensus 93 i~pG~te~ei~~~~~~~~~~~g~~p~~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD~v~i 155 (309)
++.|.|-.|++..+|..+.+. ... .+.. .| ....+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-f~~----------Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-FLH----------AIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-cee----------eEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 456899999999999777542 111 1110 11 223456788999999986
No 99
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=24.30 E-value=82 Score=20.89 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHh---hh-CCCC-CcHHHHHHHHHH
Q 021683 74 CMRVSGRLAAQVLEYAG---TL-VKPG-ITTDEIDKAVHQ 108 (309)
Q Consensus 74 ~~r~A~~i~~~~l~~~~---~~-i~pG-~te~ei~~~~~~ 108 (309)
.|.+|++++.++++.-. +. ++.| +|+.++++++.-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 57889999988886532 22 3345 788888877653
No 100
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=22.78 E-value=1e+02 Score=24.35 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhhCCCCCcHHHHHHHHHH
Q 021683 80 RLAAQVLEYAGTLVKPGITTDEIDKAVHQ 108 (309)
Q Consensus 80 ~i~~~~l~~~~~~i~pG~te~ei~~~~~~ 108 (309)
.++......+.+.+..|.|..||-+.+.+
T Consensus 57 ~iA~dmR~~Vr~~i~~G~Sd~eI~~~~v~ 85 (126)
T TIGR03147 57 PIAYDLRHEVYSMVNEGKSNQQIIDFMTA 85 (126)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 47888889999999999999988766543
No 101
>PF13798 PCYCGC: Protein of unknown function with PCYCGC motif
Probab=21.81 E-value=1.9e+02 Score=23.82 Aligned_cols=47 Identities=15% Similarity=0.189 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCcHHHHHHHHHHHHHHcCCccCC
Q 021683 73 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP 119 (309)
Q Consensus 73 ~~~r~A~~i~~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~g~~p~~ 119 (309)
+.+-..|.++-.+...+....+.|.|..||...+.+.-.+-++.|.+
T Consensus 108 d~Hg~~C~vCl~ia~~a~~~~~~Gks~~eIR~~ID~kYk~g~~~pTp 154 (158)
T PF13798_consen 108 DDHGTRCGVCLDIAVQAVQMYQEGKSPKEIRQYIDEKYKEGYAKPTP 154 (158)
T ss_pred cccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCCC
Confidence 34556677888888888899999999999999999988887787753
Done!