Query 021684
Match_columns 309
No_of_seqs 111 out of 876
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 04:53:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021684.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021684hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1387 Glycosyltransferase [C 100.0 1.1E-52 2.3E-57 383.5 23.7 280 7-300 11-299 (465)
2 PLN02949 transferase, transfer 100.0 3.5E-51 7.6E-56 401.7 26.7 284 24-309 23-310 (463)
3 cd03806 GT1_ALG11_like This fa 100.0 4.9E-43 1.1E-47 340.7 24.1 272 36-309 2-280 (419)
4 cd03805 GT1_ALG2_like This fam 99.8 9.4E-20 2E-24 173.7 19.6 237 35-309 1-252 (392)
5 cd03804 GT1_wbaZ_like This fam 99.8 1.3E-19 2.9E-24 170.7 15.1 227 36-309 1-228 (351)
6 PRK15179 Vi polysaccharide bio 99.6 7.4E-14 1.6E-18 143.2 20.7 238 36-309 283-555 (694)
7 PF13439 Glyco_transf_4: Glyco 99.6 7.1E-15 1.5E-19 123.3 10.0 176 37-259 1-177 (177)
8 cd03818 GT1_ExpC_like This fam 99.6 7.4E-14 1.6E-18 134.4 18.1 234 36-309 1-250 (396)
9 cd03809 GT1_mtfB_like This fam 99.6 5.6E-14 1.2E-18 130.6 15.9 224 36-309 1-233 (365)
10 TIGR03088 stp2 sugar transfera 99.6 2E-13 4.3E-18 129.7 17.9 221 34-309 1-236 (374)
11 cd04955 GT1_like_6 This family 99.5 2.5E-13 5.5E-18 127.1 16.9 218 36-309 1-228 (363)
12 cd03796 GT1_PIG-A_like This fa 99.5 2E-13 4.3E-18 131.6 15.7 225 36-309 1-231 (398)
13 cd03811 GT1_WabH_like This fam 99.5 2.4E-13 5.3E-18 124.2 14.2 219 36-309 1-227 (353)
14 cd03812 GT1_CapH_like This fam 99.5 3E-13 6.5E-18 126.5 15.0 219 36-309 1-230 (358)
15 cd03819 GT1_WavL_like This fam 99.5 3.5E-13 7.6E-18 125.9 15.2 206 40-309 3-223 (355)
16 cd03820 GT1_amsD_like This fam 99.5 6.3E-13 1.4E-17 121.5 15.7 213 36-309 1-216 (348)
17 cd04962 GT1_like_5 This family 99.5 4.2E-13 9.1E-18 126.5 14.9 221 35-309 1-234 (371)
18 PLN02871 UDP-sulfoquinovose:DA 99.5 1.5E-12 3.3E-17 128.3 16.9 227 32-309 56-297 (465)
19 PRK10307 putative glycosyl tra 99.5 1.2E-12 2.7E-17 126.4 16.0 246 35-309 1-266 (412)
20 TIGR03449 mycothiol_MshA UDP-N 99.5 7.1E-13 1.5E-17 127.4 14.1 234 39-309 11-259 (405)
21 PRK09922 UDP-D-galactose:(gluc 99.4 5.5E-13 1.2E-17 126.8 11.5 210 35-309 1-217 (359)
22 TIGR02149 glgA_Coryne glycogen 99.4 3.3E-12 7.2E-17 121.6 14.8 222 35-309 1-236 (388)
23 cd03807 GT1_WbnK_like This fam 99.4 6.9E-12 1.5E-16 115.6 16.1 218 36-309 1-231 (365)
24 cd03801 GT1_YqgM_like This fam 99.4 1.3E-11 2.8E-16 113.0 17.2 227 36-309 1-237 (374)
25 cd04951 GT1_WbdM_like This fam 99.4 7.9E-12 1.7E-16 116.7 15.6 213 36-309 1-226 (360)
26 PRK10125 putative glycosyl tra 99.4 2.8E-11 6E-16 117.6 19.8 80 215-297 184-269 (405)
27 cd03822 GT1_ecORF704_like This 99.4 2E-11 4.3E-16 113.6 17.0 209 36-309 1-223 (366)
28 cd03800 GT1_Sucrose_synthase T 99.4 1.1E-11 2.5E-16 117.5 15.4 93 215-309 157-258 (398)
29 cd03795 GT1_like_4 This family 99.4 3.5E-11 7.6E-16 112.2 17.3 216 36-309 1-225 (357)
30 cd03821 GT1_Bme6_like This fam 99.4 2.4E-11 5.2E-16 112.4 15.7 229 36-309 1-241 (375)
31 cd05844 GT1_like_7 Glycosyltra 99.4 6.8E-12 1.5E-16 118.1 12.2 146 135-309 77-226 (367)
32 cd03808 GT1_cap1E_like This fa 99.3 6.6E-11 1.4E-15 108.6 18.1 221 36-309 1-226 (359)
33 cd03802 GT1_AviGT4_like This f 99.3 2.6E-11 5.7E-16 112.3 15.3 191 35-296 1-196 (335)
34 cd03823 GT1_ExpE7_like This fa 99.3 3.3E-11 7.2E-16 111.3 15.7 220 36-309 1-227 (359)
35 cd03799 GT1_amsK_like This is 99.3 3.2E-11 6.9E-16 112.4 14.9 213 36-309 1-217 (355)
36 cd03792 GT1_Trehalose_phosphor 99.3 5.7E-11 1.2E-15 113.2 15.7 214 36-309 1-228 (372)
37 cd03794 GT1_wbuB_like This fam 99.3 6.5E-11 1.4E-15 109.8 15.3 242 36-309 1-257 (394)
38 TIGR02472 sucr_P_syn_N sucrose 99.3 6.4E-11 1.4E-15 116.0 14.8 227 47-296 25-273 (439)
39 cd03814 GT1_like_2 This family 99.3 3.2E-11 7E-16 111.8 12.0 223 36-309 1-234 (364)
40 cd03798 GT1_wlbH_like This fam 99.3 1.6E-10 3.5E-15 106.3 16.2 226 38-309 2-240 (377)
41 KOG0853 Glycosyltransferase [C 99.3 1.3E-11 2.8E-16 120.5 8.9 234 32-302 32-304 (495)
42 PRK00654 glgA glycogen synthas 99.3 6E-11 1.3E-15 117.1 13.8 253 35-309 1-318 (466)
43 cd03817 GT1_UGDG_like This fam 99.3 1.8E-10 4E-15 106.6 15.9 228 36-309 1-240 (374)
44 cd03816 GT1_ALG1_like This fam 99.2 2.2E-10 4.9E-15 111.4 16.0 223 34-299 3-260 (415)
45 PRK15427 colanic acid biosynth 99.2 3.4E-10 7.4E-15 109.9 14.0 90 217-309 170-260 (406)
46 PRK15484 lipopolysaccharide 1, 99.1 3.3E-10 7.1E-15 109.0 12.1 86 221-309 139-231 (380)
47 PRK15490 Vi polysaccharide bio 99.1 8.6E-10 1.9E-14 109.8 15.2 145 134-309 274-436 (578)
48 PLN02316 synthase/transferase 99.1 2.2E-09 4.9E-14 113.5 18.3 229 32-309 585-876 (1036)
49 cd03791 GT1_Glycogen_synthase_ 99.1 5.7E-10 1.2E-14 109.9 13.1 91 215-309 204-332 (476)
50 TIGR02095 glgA glycogen/starch 99.1 8.7E-10 1.9E-14 108.9 14.3 90 216-309 200-327 (473)
51 PLN02275 transferase, transfer 99.1 6E-09 1.3E-13 99.8 18.3 83 210-297 154-239 (371)
52 TIGR03087 stp1 sugar transfera 99.1 5.2E-09 1.1E-13 100.9 17.7 98 210-309 161-266 (397)
53 TIGR02468 sucrsPsyn_pln sucros 99.1 4.6E-09 9.9E-14 111.0 17.8 252 28-298 163-506 (1050)
54 cd03825 GT1_wcfI_like This fam 99.1 2.9E-09 6.3E-14 99.5 14.3 88 220-309 134-232 (365)
55 TIGR02470 sucr_synth sucrose s 99.0 1.1E-08 2.3E-13 105.9 18.2 252 35-309 256-588 (784)
56 PF13579 Glyco_trans_4_4: Glyc 99.0 7.5E-10 1.6E-14 91.1 7.0 155 48-252 1-160 (160)
57 PRK14099 glycogen synthase; Pr 99.0 6.4E-09 1.4E-13 103.4 14.8 156 138-309 131-331 (485)
58 PRK00726 murG undecaprenyldiph 99.0 5E-09 1.1E-13 99.3 13.0 212 35-309 2-220 (357)
59 cd03813 GT1_like_3 This family 98.9 7.3E-09 1.6E-13 102.6 11.6 155 139-309 172-331 (475)
60 cd03785 GT1_MurG MurG is an N- 98.9 3.7E-08 8.1E-13 92.6 13.2 195 45-297 7-208 (350)
61 PRK14098 glycogen synthase; Pr 98.8 7.9E-08 1.7E-12 95.7 13.1 90 216-309 215-343 (489)
62 cd04949 GT1_gtfA_like This fam 98.7 7.1E-08 1.5E-12 91.4 10.9 144 139-309 98-242 (372)
63 PLN02939 transferase, transfer 98.7 7.9E-07 1.7E-11 93.3 18.9 260 25-309 472-815 (977)
64 PLN02846 digalactosyldiacylgly 98.7 3.9E-07 8.5E-12 89.8 15.2 236 32-309 2-266 (462)
65 PLN00142 sucrose synthase 98.6 3E-07 6.5E-12 95.5 12.1 152 139-309 407-611 (815)
66 TIGR02918 accessory Sec system 98.6 2.5E-07 5.4E-12 92.4 11.1 148 134-309 205-357 (500)
67 TIGR01133 murG undecaprenyldip 98.6 7.5E-07 1.6E-11 83.6 12.2 191 47-298 10-207 (348)
68 PHA01630 putative group 1 glyc 98.6 1.6E-07 3.4E-12 89.1 7.4 87 219-309 92-180 (331)
69 cd04946 GT1_AmsK_like This fam 98.3 9.7E-07 2.1E-11 85.7 7.3 79 218-300 180-259 (407)
70 PLN02501 digalactosyldiacylgly 98.3 2.2E-06 4.8E-11 87.3 9.8 146 133-309 427-584 (794)
71 PRK13609 diacylglycerol glucos 98.2 5.8E-06 1.3E-10 79.1 9.8 74 219-295 145-227 (380)
72 PHA01633 putative glycosyl tra 98.2 2.4E-06 5.2E-11 81.0 6.8 77 220-300 91-177 (335)
73 cd03793 GT1_Glycogen_synthase_ 98.2 2.6E-06 5.7E-11 85.3 7.0 92 214-308 219-339 (590)
74 PRK05749 3-deoxy-D-manno-octul 98.1 0.00036 7.8E-09 67.9 20.5 89 215-309 172-269 (425)
75 PLN02605 monogalactosyldiacylg 98.1 1.2E-05 2.6E-10 77.4 9.5 88 219-309 148-249 (382)
76 PRK13608 diacylglycerol glucos 98.0 2.3E-05 4.9E-10 75.8 9.4 84 220-309 146-239 (391)
77 KOG1111 N-acetylglucosaminyltr 97.8 1.7E-05 3.8E-10 74.5 4.0 224 36-309 2-233 (426)
78 PF09314 DUF1972: Domain of un 97.7 0.0014 3.1E-08 56.9 14.6 175 35-254 2-185 (185)
79 cd01635 Glycosyltransferase_GT 97.7 0.00021 4.6E-09 61.4 8.3 34 274-309 109-142 (229)
80 TIGR00215 lpxB lipid-A-disacch 97.5 0.00038 8.1E-09 67.3 8.7 132 129-300 78-223 (385)
81 cd03788 GT1_TPS Trehalose-6-Ph 97.3 0.00033 7.2E-09 69.3 6.0 55 244-300 227-293 (460)
82 cd04950 GT1_like_1 Glycosyltra 97.2 0.0004 8.7E-09 66.5 4.8 86 215-309 147-239 (373)
83 PRK00025 lpxB lipid-A-disaccha 96.6 0.0047 1E-07 58.8 6.9 81 220-305 133-223 (380)
84 TIGR02400 trehalose_OtsA alpha 96.6 0.0075 1.6E-07 59.8 8.4 54 244-299 222-287 (456)
85 PF13477 Glyco_trans_4_2: Glyc 96.5 0.062 1.4E-06 43.4 12.0 96 51-171 10-109 (139)
86 cd03786 GT1_UDP-GlcNAc_2-Epime 96.5 0.011 2.4E-07 55.7 8.1 77 220-299 140-230 (363)
87 TIGR00236 wecB UDP-N-acetylglu 96.5 0.054 1.2E-06 51.4 12.8 84 221-307 141-235 (365)
88 COG0438 RfaG Glycosyltransfera 95.9 0.017 3.6E-07 51.7 6.1 86 221-309 150-237 (381)
89 PF12038 DUF3524: Domain of un 95.9 0.14 3.1E-06 43.6 11.3 33 221-253 119-168 (168)
90 PRK12446 undecaprenyldiphospho 95.7 0.21 4.5E-06 47.8 12.6 47 124-170 75-123 (352)
91 PLN03063 alpha,alpha-trehalose 95.6 0.036 7.7E-07 58.7 7.7 56 243-300 241-308 (797)
92 TIGR03492 conserved hypothetic 95.6 0.039 8.5E-07 53.6 7.4 223 44-299 3-236 (396)
93 PF12000 Glyco_trans_4_3: Gkyc 94.9 0.6 1.3E-05 40.1 11.9 102 139-258 65-170 (171)
94 PRK14501 putative bifunctional 94.8 0.067 1.4E-06 56.1 6.8 55 244-300 228-294 (726)
95 COG0707 MurG UDP-N-acetylgluco 92.1 0.89 1.9E-05 43.7 9.0 45 122-166 73-119 (357)
96 COG0297 GlgA Glycogen synthase 91.5 3.2 7E-05 41.6 12.4 150 139-307 129-328 (487)
97 PRK09814 beta-1,6-galactofuran 91.5 0.62 1.3E-05 43.9 7.1 64 215-281 117-181 (333)
98 COG1519 KdtA 3-deoxy-D-manno-o 91.3 5.3 0.00012 39.0 13.2 190 49-301 60-259 (419)
99 PF05693 Glycogen_syn: Glycoge 91.0 0.14 3E-06 52.0 2.3 91 214-308 214-334 (633)
100 PF08323 Glyco_transf_5: Starc 89.1 6.1 0.00013 35.6 11.3 33 42-77 11-43 (245)
101 PF04007 DUF354: Protein of un 88.8 4 8.7E-05 38.9 10.1 100 52-172 14-114 (335)
102 PF08660 Alg14: Oligosaccharid 87.5 17 0.00037 31.1 13.6 44 122-166 74-126 (170)
103 TIGR03713 acc_sec_asp1 accesso 85.2 0.87 1.9E-05 46.0 3.7 79 220-305 271-354 (519)
104 TIGR02398 gluc_glyc_Psyn gluco 84.8 3.2 7E-05 41.6 7.5 54 245-300 249-314 (487)
105 PF06925 MGDG_synth: Monogalac 82.9 3.3 7.1E-05 35.0 5.8 33 220-253 136-169 (169)
106 KOG2941 Beta-1,4-mannosyltrans 82.7 48 0.001 32.0 13.7 222 30-295 9-279 (444)
107 PF04413 Glycos_transf_N: 3-De 81.5 15 0.00032 31.8 9.5 37 214-250 142-178 (186)
108 COG4671 Predicted glycosyl tra 80.4 19 0.00041 34.6 10.2 46 30-76 5-50 (400)
109 PF13528 Glyco_trans_1_3: Glyc 80.2 9.1 0.0002 35.2 8.2 36 35-76 1-36 (318)
110 PF11997 DUF3492: Domain of un 68.0 20 0.00044 32.9 7.1 87 140-241 172-264 (268)
111 PLN03064 alpha,alpha-trehalose 63.2 20 0.00043 38.9 6.8 29 269-299 363-391 (934)
112 PF12273 RCR: Chitin synthesis 61.3 6.8 0.00015 31.9 2.4 25 8-32 4-28 (130)
113 PF12273 RCR: Chitin synthesis 46.4 8.3 0.00018 31.3 0.6 28 9-36 2-29 (130)
114 PF09861 DUF2088: Domain of un 46.3 42 0.00092 29.6 5.1 47 29-75 49-96 (204)
115 TIGR02094 more_P_ylases alpha- 43.6 11 0.00025 38.8 1.2 39 269-309 389-431 (601)
116 TIGR02201 heptsyl_trn_III lipo 42.8 1.2E+02 0.0027 28.2 8.1 27 51-77 13-39 (344)
117 cd03789 GT1_LPS_heptosyltransf 42.2 2.5E+02 0.0054 25.2 9.8 36 220-258 197-232 (279)
118 PRK10916 ADP-heptose:LPS hepto 40.2 2.4E+02 0.0053 26.3 9.7 39 35-76 1-39 (348)
119 TIGR03141 cytochro_ccmD heme e 39.3 38 0.00082 22.2 2.8 12 1-12 1-12 (45)
120 cd06533 Glyco_transf_WecG_TagA 38.4 2.2E+02 0.0047 24.0 8.2 31 34-71 46-76 (171)
121 PF13844 Glyco_transf_41: Glyc 37.1 2.6E+02 0.0055 28.1 9.4 109 35-172 1-112 (468)
122 PF11346 DUF3149: Protein of u 33.7 77 0.0017 20.7 3.5 29 2-30 9-37 (42)
123 PRK10422 lipopolysaccharide co 32.3 3.9E+02 0.0085 25.0 9.7 42 32-76 3-44 (352)
124 PF03808 Glyco_tran_WecB: Glyc 32.2 1.7E+02 0.0037 24.7 6.6 33 32-71 46-78 (172)
125 PF01372 Melittin: Melittin; 31.8 46 0.00099 19.1 1.9 17 16-32 10-26 (26)
126 PRK01021 lpxB lipid-A-disaccha 31.4 1.7E+02 0.0037 30.3 7.3 37 133-172 303-346 (608)
127 TIGR02195 heptsyl_trn_II lipop 30.8 3.5E+02 0.0076 25.0 9.1 37 37-76 2-38 (334)
128 PRK10964 ADP-heptose:LPS hepto 30.4 4E+02 0.0087 24.5 9.4 39 35-76 1-39 (322)
129 PRK14762 membrane protein; Pro 30.4 71 0.0015 18.4 2.5 18 6-23 3-20 (27)
130 PF06024 DUF912: Nucleopolyhed 29.5 49 0.0011 25.7 2.5 29 5-33 62-93 (101)
131 TIGR03472 HpnI hopanoid biosyn 29.5 4E+02 0.0088 25.2 9.4 36 34-73 40-76 (373)
132 PRK10355 xylF D-xylose transpo 29.2 3.8E+02 0.0083 24.8 9.0 61 10-77 5-65 (330)
133 PF15176 LRR19-TM: Leucine-ric 28.7 75 0.0016 24.8 3.3 21 5-25 18-38 (102)
134 PF01102 Glycophorin_A: Glycop 27.0 82 0.0018 25.5 3.4 20 8-27 70-89 (122)
135 PF12606 RELT: Tumour necrosis 25.7 92 0.002 21.1 2.9 17 14-30 11-27 (50)
136 TIGR00696 wecB_tagA_cpsF bacte 25.5 3E+02 0.0065 23.6 6.9 24 48-71 55-78 (177)
137 COG0859 RfaF ADP-heptose:LPS h 24.8 4.1E+02 0.009 24.8 8.4 41 34-77 1-41 (334)
138 PF08113 CoxIIa: Cytochrome c 24.3 89 0.0019 19.3 2.4 19 2-20 4-22 (34)
139 COG0320 LipA Lipoate synthase 24.0 3.5E+02 0.0076 25.3 7.2 37 39-77 122-158 (306)
140 PF15102 TMEM154: TMEM154 prot 23.6 48 0.001 27.7 1.5 8 8-15 63-70 (146)
141 PF08496 Peptidase_S49_N: Pept 23.1 1.7E+02 0.0038 24.6 4.8 38 3-41 6-46 (155)
142 PF05762 VWA_CoxE: VWA domain 22.9 1.5E+02 0.0032 26.2 4.7 50 27-76 49-99 (222)
143 cd04299 GT1_Glycogen_Phosphory 22.4 34 0.00073 36.5 0.5 37 271-309 480-520 (778)
144 PF00982 Glyco_transf_20: Glyc 22.4 1.3E+02 0.0028 30.1 4.6 28 270-299 277-304 (474)
145 COG1922 WecG Teichoic acid bio 21.5 3.7E+02 0.0081 24.6 7.0 30 34-70 108-137 (253)
No 1
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.1e-52 Score=383.49 Aligned_cols=280 Identities=36% Similarity=0.642 Sum_probs=243.4
Q ss_pred HHHHHHHHHHHHHHHHHHhh------hhccCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCC
Q 021684 7 LIWAVITAVLASILILASHV------HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAF 80 (309)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~ 80 (309)
+|--+|+++.-+++++.... +++ ++.-..||||||+|++|||+|||+|.+.+++|+.+|++..+|||++.|.+
T Consensus 11 ~i~~~l~~v~~l~~l~~~l~~k~sl~~~~-~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t 89 (465)
T KOG1387|consen 11 LISSSLVLVYGLIKLLTWLFKKSSLLNRA-EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVT 89 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHhhhhh-hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCC
Confidence 45566777777777766554 333 44455799999999999999999999999999999999999999998889
Q ss_pred hhhHHHHHhhhcCcccCCC-CeEEEccccceeecccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCcccccee-e
Q 021684 81 PDSLLARAVDRFGVELLHP-PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA-R 158 (309)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~-~~~v~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a-~ 158 (309)
+++++.+++..|++++++. +.++.++.++|...+.|++|++++|+++.|+++++++-+..||++||||||++.+|+. +
T Consensus 90 ~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~ 169 (465)
T KOG1387|consen 90 PENILNKVKNKFDIDLDSDNIFFIYLKLRYLVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRR 169 (465)
T ss_pred HHHHHHHHHHhcCceecccceEEEEEEeeeeeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHH
Confidence 9999999999999999754 4999999999999999999999999999999999999999999999999999999964 4
Q ss_pred ecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHH
Q 021684 159 IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEK 238 (309)
Q Consensus 159 ~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~ 238 (309)
+.+.|+++|+|||.||+||+..+..++- ++...+-|..||++|..+|..+++.||.+++||+||.++|..
T Consensus 170 l~~~~V~aYvHYP~iS~DML~~l~qrq~----------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~q 239 (465)
T KOG1387|consen 170 LRRIPVVAYVHYPTISTDMLKKLFQRQK----------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQ 239 (465)
T ss_pred HccCceEEEEecccccHHHHHHHHhhhh----------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHH
Confidence 7889999999999999999998865532 124667788999999999999999999999999999999999
Q ss_pred HhCCCCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccccChh-hhhccchhHhhhccc
Q 021684 239 LWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRY-KLISTSCLEEIRCRL 300 (309)
Q Consensus 239 ~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~Kn~~-~lI~A~~f~~l~~~~ 300 (309)
.|+ ..+..+|||||++++.......++++++-+|++|+++||||+. +.++| +-..+..+
T Consensus 240 iW~-~~~~~iVyPPC~~e~lks~~~te~~r~~~ll~l~Q~RPEKnH~~Lql~A--l~~~~~pl 299 (465)
T KOG1387|consen 240 IWQ-SNTCSIVYPPCSTEDLKSKFGTEGERENQLLSLAQFRPEKNHKILQLFA--LYLKNEPL 299 (465)
T ss_pred Hhh-ccceeEEcCCCCHHHHHHHhcccCCcceEEEEEeecCcccccHHHHHHH--HHHhcCch
Confidence 999 5899999999999988754334555689999999999999999 66667 55555554
No 2
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.5e-51 Score=401.69 Aligned_cols=284 Identities=75% Similarity=1.290 Sum_probs=251.4
Q ss_pred HhhhhccCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEE
Q 021684 24 SHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVV 103 (309)
Q Consensus 24 ~~~~~~~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v 103 (309)
.-+++.++.++++|+||||+|+.|||||||+|+++.+|++.+++++++|||++.|.+.++++.+.+++|+++++..+.+|
T Consensus 23 ~~~~~~~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v 102 (463)
T PLN02949 23 LSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVV 102 (463)
T ss_pred HHHHhcccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEE
Confidence 33489999999999999999999999999999999999999999999999999877777777778888999888888999
Q ss_pred EccccceeecccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceeeecCCeEEEEeecCCcchHHHHhhhh
Q 021684 104 HLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVRE 183 (309)
Q Consensus 104 ~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~~~~~~~i~Y~H~P~~s~~~~~~~~~ 183 (309)
.+++++|++++.||++++++|+++++.++++++.+..||+++||+++++.+|++++.+.|+++|||||.+|.||+..+++
T Consensus 103 ~l~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~~~~~~v~~yvH~p~~~~dm~~~v~~ 182 (463)
T PLN02949 103 HLRKRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRD 182 (463)
T ss_pred EeccccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHHhcCCcEEEEEeCCcchHHHHHHHhh
Confidence 99889999999999999999999999999999877789999999999999998766689999999999999999999999
Q ss_pred cccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC
Q 021684 184 GSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL 263 (309)
Q Consensus 184 ~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~ 263 (309)
++..|++++++.++.+.+.+|++|++.+.++|+++.+.||.|++||+||++.+++.|+.+.++.|+|||||++.+...+.
T Consensus 183 ~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~ 262 (463)
T PLN02949 183 RSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPL 262 (463)
T ss_pred cccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCc
Confidence 99999999999888777888999999999999999999999999999999999999975457899999999876642222
Q ss_pred CCCCCCcEEEEEcCCccccChhhhhccchhHhhhccc----CCCCCccCC
Q 021684 264 ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRL----ASAQTPICG 309 (309)
Q Consensus 264 ~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~----~~~~~~~~~ 309 (309)
....++++++++|||+|+||++++|+| |+.+.+++ .+.+++|+|
T Consensus 263 ~~~~~~~~il~vGR~~~~Kg~~llI~A--~~~l~~~~~~~~~~~~LvIvG 310 (463)
T PLN02949 263 ERSEDPPYIISVAQFRPEKAHALQLEA--FALALEKLDADVPRPKLQFVG 310 (463)
T ss_pred cccCCCCEEEEEEeeeccCCHHHHHHH--HHHHHHhccccCCCcEEEEEe
Confidence 222235799999999999999999999 99886643 344677776
No 3
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=4.9e-43 Score=340.65 Aligned_cols=272 Identities=49% Similarity=0.871 Sum_probs=234.6
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEcc-ccceeecc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY-RRKWIEES 114 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~-~~~~~~~~ 114 (309)
.||||||+|++|||||||+|+++.+|++.+++++++|||++.+.+.++.+++.++.|++++.++++++.+. ++.|.+++
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 58999999999999999999999999999999999999998865555677788888998888888877754 77899999
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceee-ecCCeEEEEeecCCcchHHHHhhhhcccccCchhh
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y 193 (309)
.++++++++|+++.+.++++.+.+.+|||+++++++++..|+++ +.++|+++|||+|.+|.|++..++.+...|+|+.+
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~ 161 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSAT 161 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccc
Confidence 99999999999999999888886778999999999898888765 46889999999999999998878888888999999
Q ss_pred hhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCCCCCCcEEE
Q 021684 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAII 273 (309)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iL 273 (309)
+++++..+.+|.+|++++.++++++.+.+|.+++||+||++.+.+.|+...++.|||||||++.+...+.....++..++
T Consensus 162 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~~~~~~~il 241 (419)
T cd03806 162 IARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQIL 241 (419)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccccccCCcEEE
Confidence 99887777889999999999999999999999999999999999999733389999999998877532211122357999
Q ss_pred EEcCCccccChhhhhccchhHhhhcccCC-----CCCccCC
Q 021684 274 SVAQFRPEKVRYKLISTSCLEEIRCRLAS-----AQTPICG 309 (309)
Q Consensus 274 sVGRl~p~Kn~~~lI~A~~f~~l~~~~~~-----~~~~~~~ 309 (309)
++||++|+||++.+|+| |+.+.++..+ -+++|+|
T Consensus 242 ~vgr~~~~K~~~~li~A--~~~l~~~~~~~~~~~~~lvivG 280 (419)
T cd03806 242 SIAQFRPEKNHPLQLRA--FAKLLKRLPEEIKEKIKLVLIG 280 (419)
T ss_pred EEEeecCCCCHHHHHHH--HHHHHHhCcccccCceEEEEEc
Confidence 99999999999999999 9999876543 4666665
No 4
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.84 E-value=9.4e-20 Score=173.70 Aligned_cols=237 Identities=23% Similarity=0.343 Sum_probs=148.5
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
|||+|+||++ ..||+||++.++|++|.+.| +++.++|... ++....+.. .+..+.+... +.+.+..
T Consensus 1 mkIl~~~~~~-~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~--~~~~~~~~~-------~~~~~~i~~~--~~~~~~~ 66 (392)
T cd03805 1 LRVAFIHPDL-GIGGAERLVVDAALALQSRG--HEVTIYTSHH--DPSHCFEET-------KDGTLPVRVR--GDWLPRS 66 (392)
T ss_pred CeEEEECCCC-CCchHHHHHHHHHHHHHhCC--CeEEEEcCCC--Cchhcchhc-------cCCeeEEEEE--eEEEcch
Confidence 6899999999 57899999999999999887 6667888643 111111111 1111111111 1222222
Q ss_pred cCCchhhhHHHHhHHHHHHH--HHhccCCcEEEeCCCCccccceee-ecCCeEEEEeecCCcchHHHHhhhhcccccCch
Q 021684 115 TYPRFTMIGQSFGSVYLSWE--ALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~--~l~~~~pdv~iss~~~a~~~p~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~ 191 (309)
.+.++..++..+......+. .++..++|+++.... ....++.+ ..+.+++.++|+|. .+ ...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~-~~~~~~~~~~~~~~~i~~~h~~~---~~----~~~------- 131 (392)
T cd03805 67 IFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQV-SACVPLLKLFSPSKILFYCHFPD---QL----LAQ------- 131 (392)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCc-chHHHHHHHhcCCcEEEEEecCh---HH----hcC-------
Confidence 22333333333333222222 245578998875432 22223222 22478899999985 00 000
Q ss_pred hhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCC-ceEecCCCCCCCCcccCCC-----
Q 021684 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDR-IKRVYPPCDTSGLQVLPLE----- 264 (309)
Q Consensus 192 ~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~-~~VIYPPVd~~~~~~~~~~----- 264 (309)
+ .+..++++..++.++.++..+.+|.|+++|+++++.+.+.++. ..+ ..||||++|.+.+...+..
T Consensus 132 ----~---~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~ 204 (392)
T cd03805 132 ----R---GSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGL 204 (392)
T ss_pred ----C---CcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccccccc
Confidence 0 1233456666677778888899999999999999999998874 233 4599999998877531111
Q ss_pred --CCCCCcEEEEEcCCccccChhhhhccchhHhhhccc---CCCCCccCC
Q 021684 265 --RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRL---ASAQTPICG 309 (309)
Q Consensus 265 --~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~---~~~~~~~~~ 309 (309)
......+++++||+.++|+++.+|+| ++++.++. .+-++.++|
T Consensus 205 ~~~~~~~~~i~~~grl~~~Kg~~~ll~a--~~~l~~~~~~~~~~~l~i~G 252 (392)
T cd03805 205 LIPKSGKKTFLSINRFERKKNIALAIEA--FAILKDKLAEFKNVRLVIAG 252 (392)
T ss_pred cccCCCceEEEEEeeecccCChHHHHHH--HHHHHhhcccccCeEEEEEc
Confidence 11235789999999999999999999 99997775 455666655
No 5
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.82 E-value=1.3e-19 Score=170.66 Aligned_cols=227 Identities=18% Similarity=0.162 Sum_probs=137.0
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||||+|+++...|||||++.++++++. +++ ++|...+...... ... . ..++...+.. .+
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~----~~~--v~~~~~~~~~~~~--~~~------~-~~~~~~~~~~---~~--- 59 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFP----DAD--IFTLVDDPDKLPR--LLR------L-KKIRTSFIQK---LP--- 59 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCC----CCC--EEEEeecCCccch--hhc------C-Cceeechhhh---ch---
Confidence 699999999989999999998888863 233 4443321111000 000 0 0001111100 00
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceeeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIA 195 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~ 195 (309)
...+..+..+..+..+.+.++..++|+++++.... ...+....+.+++.|||+|. ++.|+... .+..
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~-~~~~~~~~~~~~~~~~h~~~------~~~~~~~~-----~~~~ 126 (351)
T cd03804 60 -FARRRYRKYLPLMPLAIEQFDLSGYDLVISSSHAV-AKGVITRPDQLHICYCHTPM------RYAWDLYH-----DYLK 126 (351)
T ss_pred -hhHhhHhhhCchhhHHHHhccccCCCEEEEcCcHH-hccccCCCCCcEEEEeCCch------HHHhcCch-----Hhhh
Confidence 00011111122334445556667899888765421 11221234688999999986 44443311 1211
Q ss_pred hcchh-hHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCCCCCCcEEEE
Q 021684 196 QSNWL-SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIS 274 (309)
Q Consensus 196 ~~~~~-~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLs 274 (309)
..+.. ..........+..+...+.+++|.++++|+.+++++.+.++ .+..|||||+|.+.+... . .+++++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~--~--~~~~~il~ 200 (351)
T cd03804 127 ESGLGKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPA--E--EKEDYYLS 200 (351)
T ss_pred hcccchhhHHHHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcC--C--CCCCEEEE
Confidence 11111 00112223344555667789999999999999999999997 788999999998877521 1 23678999
Q ss_pred EcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 275 VAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 275 VGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+||+.++||++.+|+| |+.+. .+++++|
T Consensus 201 ~G~~~~~K~~~~li~a--~~~~~-----~~l~ivG 228 (351)
T cd03804 201 VGRLVPYKRIDLAIEA--FNKLG-----KRLVVIG 228 (351)
T ss_pred EEcCccccChHHHHHH--HHHCC-----CcEEEEE
Confidence 9999999999999999 98764 4566655
No 6
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.60 E-value=7.4e-14 Score=143.15 Aligned_cols=238 Identities=13% Similarity=0.045 Sum_probs=135.3
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCC------------CCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEE
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESP------------DLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVV 103 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~------------~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v 103 (309)
||.++.+.+ ..|||||++.++++++.+.+. +..+++.+.......+.....++ ..++.+.
T Consensus 283 rIl~vi~sl-~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~-------~~Gv~v~ 354 (694)
T PRK15179 283 PVLMINGSL-GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLA-------DAGIPVS 354 (694)
T ss_pred eEEEEeCCC-CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHH-------hCCCeEE
Confidence 999999999 778999999999999999742 13344433211001111222222 1222333
Q ss_pred Ecccccee-ec---ccCCchh-----hhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-ee-eecCCeEEEEe-ecC
Q 021684 104 HLYRRKWI-EE---STYPRFT-----MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFGCRVICYT-HYP 171 (309)
Q Consensus 104 ~l~~~~~~-~~---~~~~~~~-----l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a-~~~~~~~i~Y~-H~P 171 (309)
.+...... .. .....+. +.+.....+....+.+++.+||+++..+..++.+. ++ +..+.|+|.+. |.-
T Consensus 355 ~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~ 434 (694)
T PRK15179 355 VYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTM 434 (694)
T ss_pred EeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 33221110 00 0000000 01111222333445677889999997655444333 22 34567776644 431
Q ss_pred CcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEec
Q 021684 172 TISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVY 250 (309)
Q Consensus 172 ~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIY 250 (309)
. ... . ....+..|..++.. ......+.+++||+.+++.+.+.++. ++++.|||
T Consensus 435 ~--~~~-~--------------------~~~~~~~~~~l~~~---l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~ 488 (694)
T PRK15179 435 P--PVD-R--------------------PDRYRVEYDIIYSE---LLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVY 488 (694)
T ss_pred c--ccc-c--------------------hhHHHHHHHHHHHH---HHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEEC
Confidence 1 000 0 00111122221111 11234678999999999999988886 57899999
Q ss_pred CCCCCCCCcccCC--------C--CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 251 PPCDTSGLQVLPL--------E--RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 251 PPVd~~~~~~~~~--------~--~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
|+||.+.+...+. . ......+++++||++|+|+++.+|+| |+.+.++..+.++.|+|
T Consensus 489 NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A--~a~l~~~~p~~~LvIvG 555 (694)
T PRK15179 489 NGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEA--AQRFAASHPKVRFIMVG 555 (694)
T ss_pred CCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHH--HHHHHHHCcCeEEEEEc
Confidence 9999877742110 0 01123478899999999999999999 99987766666777766
No 7
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.59 E-value=7.1e-15 Score=123.34 Aligned_cols=176 Identities=19% Similarity=0.164 Sum_probs=91.6
Q ss_pred EEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccC
Q 021684 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (309)
Q Consensus 37 Ia~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~ 116 (309)
|.+++.++...||+|+++.+++++|+++| +++.+++...+... .... ........ .
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~-----------~~~~-----~~~~~~~~-~----- 56 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPI-----------EEEL-----VKIFVKIP-Y----- 56 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS------------SSTE-----EEE---TT-------
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccc-----------hhhc-----cceeeeee-c-----
Confidence 56888888899999999999999999987 66678876542110 0000 00000000 0
Q ss_pred CchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceeeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhh
Q 021684 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (309)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~ 196 (309)
.........+.....+.+.+++.+||+++...............+.|.+..+|.+.....+.. . .
T Consensus 57 ~~~~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~~~~~~----~----~------- 121 (177)
T PF13439_consen 57 PIRKRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACRKVPIVYTIHGPYFERRFLK----S----K------- 121 (177)
T ss_dssp SSTSS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHHCSCEEEEE-HHH--HHTTT----T----S-------
T ss_pred ccccccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhccCCCEEEEeCCCcccccccc----c----c-------
Confidence 000011122223334456677889999865543222222111127889999999752110000 0 0
Q ss_pred cchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCc
Q 021684 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQ 259 (309)
Q Consensus 197 ~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~ 259 (309)
......... ....+..+++|.+||+|+++++++.+ +|+ +.++.|||||||++.|.
T Consensus 122 ---~~~~~~~~~----~~~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 122 ---LSPYSYLNF----RIERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ---CCCHHHHHH----CTTHHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred ---cchhhhhhh----hhhhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence 000111111 11233358999999999999999999 987 78999999999998873
No 8
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.58 E-value=7.4e-14 Score=134.38 Aligned_cols=234 Identities=17% Similarity=0.116 Sum_probs=135.8
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||.|+|+++-.. +..+|++|.++| +++.++|...+.. .+.+++++.+..........
T Consensus 1 ~il~~~~~~p~~------~~~la~~L~~~G--~~v~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~~~~ 57 (396)
T cd03818 1 RILFVHQNFPGQ------FRHLAPALAAQG--HEVVFLTEPNAAP---------------PPGGVRVVRYRPPRGPTSGT 57 (396)
T ss_pred CEEEECCCCchh------HHHHHHHHHHCC--CEEEEEecCCCCC---------------CCCCeeEEEecCCCCCCCCC
Confidence 588999999322 456889999986 6677888654211 01123333332111101111
Q ss_pred CCchhhhHHHHh---HHHHHHHHH--hccCCcEEEeCCCCccccceee-ecCCeEEEEeecCCcchHHHHhhhhcccccC
Q 021684 116 YPRFTMIGQSFG---SVYLSWEAL--CKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (309)
Q Consensus 116 ~~~~~l~~~~l~---~~~~~~~~l--~~~~pdv~iss~~~a~~~p~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (309)
++....+...+. .+......+ +..+||++++..++.....+.. ..+.|.+.|+|+..... .....++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~~-------~~~~~~~ 130 (396)
T cd03818 58 HPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRAE-------GADVGFD 130 (396)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCCEEEEEeeeecCC-------CCCCCCC
Confidence 222222222221 111112222 3457999998877665555443 35689999998754100 0000111
Q ss_pred chhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCC-----
Q 021684 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE----- 264 (309)
Q Consensus 190 ~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~----- 264 (309)
.+. ... .. ...++ +....+....+..+|.+|++|+++++.+.+.++ .++.||||++|++.|...+..
T Consensus 131 ~~~-~~~--~~-~~~~~--~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~--~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 131 PEF-PPS--LD-DALRL--RNRNALILLALAQADAGVSPTRWQRSTFPAELR--SRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred CCC-CCc--hh-HHHHH--HHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc--cceEEeCCCccccccCCCchhhhccc
Confidence 100 000 00 00010 111112345568899999999999999999886 899999999999888632110
Q ss_pred C----CCCCcEEEEEcC-CccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 265 R----STEYPAIISVAQ-FRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 265 ~----~~~~~~iLsVGR-l~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
. ...++.++++|| ++++|+++.+|+| ++.+.++..+.++++.|
T Consensus 203 ~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a--~~~l~~~~~~~~lvivG 250 (396)
T cd03818 203 NGRVLTPGDEVITFVARNLEPYRGFHVFMRA--LPRLLRARPDARVVIVG 250 (396)
T ss_pred ccccCCCCCeEEEEECCCcccccCHHHHHHH--HHHHHHHCCCcEEEEEc
Confidence 0 123467999998 9999999999999 99997776666666655
No 9
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.57 E-value=5.6e-14 Score=130.65 Aligned_cols=224 Identities=16% Similarity=0.085 Sum_probs=136.0
Q ss_pred EEEEEcCCCCC--CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeec
Q 021684 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (309)
Q Consensus 36 rIa~~hp~l~~--gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~ 113 (309)
||+|+..++.. .||+|+++.+++++|++.+.++ .+++...+... ... . . ... .... +..
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v--~~~~~~~~~~~--~~~--~---~-~~~----~~~~----~~~- 61 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEE--VLLLLPGAPGL--LLL--P---L-RAA----LRLL----LRL- 61 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCce--EEEEecCcccc--ccc--c---c-hhc----cccc----ccc-
Confidence 57888888865 8999999999999999987555 44443321110 000 0 0 000 0000 000
Q ss_pred ccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceeeecCCeEEEEeecCCcchHHHHhhhhcccccCchhh
Q 021684 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (309)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y 193 (309)
.........+.........+.+.+||+++......... +..+.|.+..+|... ..+ +. .+
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~---~~~~~~~i~~~hd~~-~~~-----------~~--~~ 121 (365)
T cd03809 62 ---PRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL---RLRGVPVVVTIHDLI-PLR-----------FP--EY 121 (365)
T ss_pred ---ccccccchhhHHHHHHHHHhhhcCCCeeeecccccCcc---cCCCCCEEEEeccch-hhh-----------Cc--cc
Confidence 00000001111111222334457899999776533111 344788899899653 000 00 00
Q ss_pred hhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC------CCC
Q 021684 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL------ERS 266 (309)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~------~~~ 266 (309)
... .....+....+...+.+|.++++|+++++.+.+.++. +.++.|++|+++.+.+..... ...
T Consensus 122 ------~~~---~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
T cd03809 122 ------FSP---GFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYL 192 (365)
T ss_pred ------CCH---HHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHHHHHHhcC
Confidence 000 0122233445566688999999999999999999975 578899999999877753210 111
Q ss_pred CCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 267 TEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 267 ~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..+..++++||+.++|+++.+++| |..+.++..+-++.++|
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~~l~~--~~~~~~~~~~~~l~i~G 233 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLERLLEA--FARLPAKGPDPKLVIVG 233 (365)
T ss_pred CCCCeEEEeCCCccccCHHHHHHH--HHHHHHhcCCCCEEEec
Confidence 235789999999999999999999 99998776666777766
No 10
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.55 E-value=2e-13 Score=129.71 Aligned_cols=221 Identities=14% Similarity=0.097 Sum_probs=127.9
Q ss_pred CcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeec
Q 021684 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (309)
Q Consensus 34 ~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~ 113 (309)
+++|..+.+.+ ..||+|+++.+++++|.+.+.+ +.+++... .+...+.+.. .+ ++++.+....
T Consensus 1 ~~~il~ii~~~-~~GG~e~~~~~l~~~l~~~~~~--~~v~~~~~---~~~~~~~~~~-~~------i~~~~~~~~~---- 63 (374)
T TIGR03088 1 RPLIVHVVYRF-DVGGLENGLVNLINHLPADRYR--HAVVALTE---VSAFRKRIQR-PD------VAFYALHKQP---- 63 (374)
T ss_pred CceEEEEeCCC-CCCcHHHHHHHHHhhccccccc--eEEEEcCC---CChhHHHHHh-cC------ceEEEeCCCC----
Confidence 35899999999 6789999999999999877643 34554321 1122222221 12 2333332110
Q ss_pred ccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce-eeecCCeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
...+ ..+....+.+++.+||+++.....+....+ ++..+.+.. +|+.. ..+. ++.
T Consensus 64 --~~~~-------~~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~--i~~~h-~~~~----------~~~-- 119 (374)
T TIGR03088 64 --GKDV-------AVYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPAR--IHGEH-GRDV----------FDL-- 119 (374)
T ss_pred --CCCh-------HHHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeE--EEeec-Cccc----------ccc--
Confidence 0011 112233455778899999865332211111 223344432 33321 0000 000
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCC-------
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------- 264 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~------- 264 (309)
.+. +..| .. +.+...+.+|.+++.|+.+++.+.+.++. +.++.||||++|.+.+......
T Consensus 120 -------~~~-~~~~-~~---~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~ 187 (374)
T TIGR03088 120 -------DGS-NWKY-RW---LRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPP 187 (374)
T ss_pred -------hhh-HHHH-HH---HHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHh
Confidence 000 0011 11 12223356899999999999999998876 5788999999998877521100
Q ss_pred --CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccC----CCCCccCC
Q 021684 265 --RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLA----SAQTPICG 309 (309)
Q Consensus 265 --~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~----~~~~~~~~ 309 (309)
.......++++||++++|+++.+|+| |+.+.++.. +-+++++|
T Consensus 188 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a--~~~l~~~~~~~~~~~~l~i~G 236 (374)
T TIGR03088 188 DFFADESVVVGTVGRLQAVKDQPTLVRA--FALLVRQLPEGAERLRLVIVG 236 (374)
T ss_pred hcCCCCCeEEEEEecCCcccCHHHHHHH--HHHHHHhCcccccceEEEEec
Confidence 01224588999999999999999999 999876654 23555554
No 11
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.54 E-value=2.5e-13 Score=127.09 Aligned_cols=218 Identities=14% Similarity=0.057 Sum_probs=127.2
Q ss_pred EEEEEcC--CCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeec
Q 021684 36 SVAFFHP--NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (309)
Q Consensus 36 rIa~~hp--~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~ 113 (309)
||||+.. +....||+|+++.+++++|++.|. ++.+++.... .... . ...++++++.+....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~--~v~v~~~~~~-~~~~-----~-----~~~~~i~~~~~~~~~---- 63 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGH--EVTVYCRSPY-PKQK-----E-----TEYNGVRLIHIPAPE---- 63 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCC--CEEEEEccCC-CCCc-----c-----cccCCceEEEcCCCC----
Confidence 5788866 346789999999999999999884 4566665421 1100 0 111222333331110
Q ss_pred ccCCchhhhHHHHhHHHHHHHHH-hccCCcEEEeCCCCccccc---eeeecCCeEEEEeecCCcchHHHHhhhhcccccC
Q 021684 114 STYPRFTMIGQSFGSVYLSWEAL-CKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (309)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~l-~~~~pdv~iss~~~a~~~p---~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (309)
........+ .+....+.+ .+.++|++++..... .+ +++..+.|++..+|......
T Consensus 64 -~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~v~~~h~~~~~~-------------- 122 (363)
T cd04955 64 -IGGLGTIIY----DILAILHALFVKRDIDHVHALGPAI--APFLPLLRLKGKKVVVNMDGLEWKR-------------- 122 (363)
T ss_pred -ccchhhhHH----HHHHHHHHHhccCCeEEEEecCccH--HHHHHHHHhcCCCEEEEccCcceee--------------
Confidence 000001111 111122222 245567777654321 22 22234788888888643100
Q ss_pred chhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcc-c---CCCC
Q 021684 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-L---PLER 265 (309)
Q Consensus 190 ~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~-~---~~~~ 265 (309)
.. +... ..+++....+++.+.+|.|+++|+++++.+++.|| .+..+|+|++|.+.+.. . ....
T Consensus 123 -~~------~~~~----~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~--~~~~~i~ngv~~~~~~~~~~~~~~~~ 189 (363)
T cd04955 123 -AK------WGRP----AKRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYG--RDSTYIPYGADHVVSSEEDEILKKYG 189 (363)
T ss_pred -cc------cccc----hhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcC--CCCeeeCCCcChhhcchhhhhHHhcC
Confidence 00 0001 11222333455668899999999999999998898 45599999999776542 0 0001
Q ss_pred CCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 266 STEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 266 ~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..++++++++||+.++|+++.+++| ++.+.+ +.++.++|
T Consensus 190 ~~~~~~i~~~G~~~~~Kg~~~li~a--~~~l~~---~~~l~ivG 228 (363)
T cd04955 190 LEPGRYYLLVGRIVPENNIDDLIEA--FSKSNS---GKKLVIVG 228 (363)
T ss_pred CCCCcEEEEEecccccCCHHHHHHH--HHhhcc---CceEEEEc
Confidence 1235689999999999999999999 998854 44566655
No 12
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.53 E-value=2e-13 Score=131.61 Aligned_cols=225 Identities=16% Similarity=0.130 Sum_probs=131.3
Q ss_pred EEEEEcC-CCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 36 SVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 36 rIa~~hp-~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
||+++-+ +....||+|+.+.+++++|.+.| +++.++|...+.... .. ....++++..+....+...
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~~---~~-------~~~~~i~v~~~p~~~~~~~- 67 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRVG---IR-------YLTNGLKVYYLPFVVFYNQ- 67 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCCC---cc-------cccCceeEEEecceeccCC-
Confidence 4666555 33357999999999999999987 566788864311100 00 0111222222211111000
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc---e-eeecCCeEEEEeecCCcchHHHHhhhhcccccCc
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p---~-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~ 190 (309)
..+...+.......+.+++.+||+++.......... + ++..+.|.|.-.|... . ...
T Consensus 68 -----~~~~~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~-~-------------~~~ 128 (398)
T cd03796 68 -----STLPTFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLF-G-------------FAD 128 (398)
T ss_pred -----ccccchhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccc-c-------------ccc
Confidence 001111122233344566789999997754332211 1 2344677777667532 0 000
Q ss_pred hhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCCCCCC
Q 021684 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (309)
Q Consensus 191 ~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~~~~~ 269 (309)
.... . ...+.++..+++|.++++|+..++.+....+. ++++.||||++|.+.|.........+.
T Consensus 129 --------~~~~---~----~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~~~~~~ 193 (398)
T cd03796 129 --------ASSI---H----TNKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSKRDNDK 193 (398)
T ss_pred --------hhhH---H----hhHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcccCCCCc
Confidence 0000 0 11123445688999999999999877555554 578899999999887753211112235
Q ss_pred cEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 270 PAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 270 ~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..++++||+.++||++.+|+| ++.+.++..+-++.+.|
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a--~~~l~~~~~~~~l~i~G 231 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGI--IPEICKKHPNVRFIIGG 231 (398)
T ss_pred eEEEEEeccchhcCHHHHHHH--HHHHHhhCCCEEEEEEe
Confidence 689999999999999999999 99887665555555543
No 13
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.51 E-value=2.4e-13 Score=124.24 Aligned_cols=219 Identities=23% Similarity=0.281 Sum_probs=135.7
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||+++++.+ .+||+++++.+++++|.+.+ +++.+++...+... . . ........... .....
T Consensus 1 kIl~~~~~~-~~gG~~~~~~~l~~~l~~~g--~~v~v~~~~~~~~~--~-~--------~~~~~~~~~~~--~~~~~--- 61 (353)
T cd03811 1 KILFVIPSL-GGGGAERVLLNLANGLDKRG--YDVTLVVLRDEGDY--L-E--------LLPSNVKLIPV--RVLKL--- 61 (353)
T ss_pred CeEEEeecc-cCCCcchhHHHHHHHHHhcC--ceEEEEEcCCCCcc--c-c--------ccccchhhhce--eeeec---
Confidence 689999999 48899999999999998877 55566665431110 0 0 00000000000 00000
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCC-Cccccce-eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSG-YAFTYPL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~-~a~~~p~-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y 193 (309)
...... .......+.+++.+||+++.... ....... ....+.|.+.++|... ....
T Consensus 62 -~~~~~~----~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~---------------- 119 (353)
T cd03811 62 -KSLRDL----LAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSL-SLEL---------------- 119 (353)
T ss_pred -ccccch----hHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcc-hhhh----------------
Confidence 000000 01122344567778998887654 2222221 1112578899999875 1100
Q ss_pred hhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCC-----CCC
Q 021684 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-----RST 267 (309)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~-----~~~ 267 (309)
. ...... .......+.+|.++++|+.+++.+.+.++. ..++.|++||++.+.+...... ...
T Consensus 120 ------~-~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (353)
T cd03811 120 ------K-RKLRLL-----LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPP 187 (353)
T ss_pred ------c-cchhHH-----HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhhhcCCCC
Confidence 0 000000 234556689999999999999999999985 5789999999998777532111 123
Q ss_pred CCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 268 EYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 268 ~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+...++++||+.+.|+++.+++| ++.+.++..+-++.++|
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~~--~~~l~~~~~~~~l~i~G 227 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIRA--FALLRKEGPDARLVILG 227 (353)
T ss_pred CceEEEEEecchhhcChHHHHHH--HHHhhhcCCCceEEEEc
Confidence 35789999999999999999999 99998776666777765
No 14
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.51 E-value=3e-13 Score=126.54 Aligned_cols=219 Identities=15% Similarity=0.065 Sum_probs=131.3
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||+++++++ ..||+|+++.+++++|.+.+ +++.+++.... + +....... ..+ .++....
T Consensus 1 kIl~~~~~~-~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~-~-~~~~~~~~-~~~------~~~~~~~--------- 59 (358)
T cd03812 1 KILHIVGTM-NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKE-E-GDYDDEIE-KLG------GKIYYIP--------- 59 (358)
T ss_pred CEEEEeCCC-CCccHHHHHHHHHHhcCccc--eEEEEEEeCCC-C-cchHHHHH-HcC------CeEEEec---------
Confidence 689999999 89999999999999998665 66677775431 1 11111111 011 1222211
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce--eeecCCeE-EEEeecCCcchHHHHhhhhcccccCchh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRV-ICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~--a~~~~~~~-i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
+....++. ......+.+++.+||+++.........+. ++..+.+. +...|...... ..
T Consensus 60 -~~~~~~~~---~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------~~ 120 (358)
T cd03812 60 -ARKKNPLK---YFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSH---------------DK 120 (358)
T ss_pred -CCCccHHH---HHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccc---------------cc
Confidence 00111111 11222345667899988876543212221 12234444 44466653100 00
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC--------C
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--------E 264 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~--------~ 264 (309)
.. +.... ..+.....+.+|.+++.|+..++.+.+... +.++.||||+||.+.+...+. .
T Consensus 121 ------~~---~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~ 187 (358)
T cd03812 121 ------KK---KILKY---KVLRKLINRLATDYLACSEEAGKWLFGKVK-NKKFKVIPNGIDLEKFIFNEEIRKKRRELG 187 (358)
T ss_pred ------cc---hhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhCCC-cccEEEEeccCcHHHcCCCchhhhHHHHcC
Confidence 00 00000 122334457899999999999999987633 578999999999876642111 0
Q ss_pred CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 265 RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 265 ~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
...+...++++||++++|+++.+|+| ++.+.++..+-++.++|
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~li~a--~~~l~~~~~~~~l~ivG 230 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEFLIEI--FAELLKKNPNAKLLLVG 230 (358)
T ss_pred CCCCCEEEEEEeccccccChHHHHHH--HHHHHHhCCCeEEEEEe
Confidence 12235789999999999999999999 99998776666777765
No 15
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.51 E-value=3.5e-13 Score=125.94 Aligned_cols=206 Identities=17% Similarity=0.106 Sum_probs=128.4
Q ss_pred EcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCch
Q 021684 40 FHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRF 119 (309)
Q Consensus 40 ~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~ 119 (309)
++|++ ..||+|+++.+++++|.+.| +++.+++... .. .+.++. .++ +++...... ...+
T Consensus 3 ~~~~~-~~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~--~~---~~~~~~-~~~------~~~~~~~~~------~~~~ 61 (355)
T cd03819 3 VLPAL-ESGGVERGTLELARALVERG--HRSLVASAGG--RL---VAELEA-EGS------RHIKLPFIS------KNPL 61 (355)
T ss_pred cchhh-ccCcHHHHHHHHHHHHHHcC--CEEEEEcCCC--ch---HHHHHh-cCC------eEEEccccc------cchh
Confidence 46888 56899999999999999987 5566776533 11 111211 121 222221100 0001
Q ss_pred hhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce-e-eecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhc
Q 021684 120 TMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-A-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197 (309)
Q Consensus 120 ~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~-a-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~ 197 (309)
..+.......+.+++.+||+++..+........ + +..+.|.+..+|... .
T Consensus 62 ----~~~~~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~------~------------------ 113 (355)
T cd03819 62 ----RILLNVARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFY------S------------------ 113 (355)
T ss_pred ----hhHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCch------h------------------
Confidence 111122333455677899988866432211121 1 234678888888643 0
Q ss_pred chhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCC------------
Q 021684 198 NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------------ 264 (309)
Q Consensus 198 ~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~------------ 264 (309)
... . +....+++|.++++|+.+++.+++.++. ..++.||+|++|.+.+......
T Consensus 114 -~~~----~--------~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~ 180 (355)
T cd03819 114 -VNF----R--------YNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWP 180 (355)
T ss_pred -hHH----H--------HHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcC
Confidence 000 1 1222357999999999999999988886 5789999999998877532110
Q ss_pred CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 265 RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 265 ~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
...+...++++||+.++|+++.+++| ++.++++..+-++.+.|
T Consensus 181 ~~~~~~~i~~~Gr~~~~Kg~~~li~~--~~~l~~~~~~~~l~ivG 223 (355)
T cd03819 181 LPKGKPVILLPGRLTRWKGQEVFIEA--LARLKKDDPDVHLLIVG 223 (355)
T ss_pred CCCCceEEEEeeccccccCHHHHHHH--HHHHHhcCCCeEEEEEE
Confidence 12235679999999999999999999 99997764444555544
No 16
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.50 E-value=6.3e-13 Score=121.49 Aligned_cols=213 Identities=18% Similarity=0.130 Sum_probs=131.4
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||+|+.+++...||+|+++.+++++|.+.+ +++.+++...+ + .. .....+.+.+..+......
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~-~~---------~~~~~~~~~~~~~~~~~~~---- 63 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKG--HEVTIISLDKG-E-PP---------FYELDPKIKVIDLGDKRDS---- 63 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCC--CeEEEEecCCC-C-CC---------ccccCCccceeeccccccc----
Confidence 689999999658999999999999999876 55667765431 1 00 0012222222222110000
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-eee-ecCC-eEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LAR-IFGC-RVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a~-~~~~-~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
.....+.......+.+++.+||+++...+. ... ++. ..+. +.+..+|...... .
T Consensus 64 -----~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~---~------------- 120 (348)
T cd03820 64 -----KLLARFKKLRRLRKLLKNNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEHNSPDAY---K------------- 120 (348)
T ss_pred -----chhccccchHHHHHhhcccCCCEEEEcCch--HHHHHHHHhhccccEEEecCCCccch---h-------------
Confidence 000001112233445677899988877653 112 121 2233 7888888764100 0
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCCCCCCcEE
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAI 272 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~i 272 (309)
..... . ...+...+.+|.+++.|+.++....... +.++.|++||++.+.+... ...++..+
T Consensus 121 -------~~~~~--~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~--~~~~~vi~~~~~~~~~~~~---~~~~~~~i 181 (348)
T cd03820 121 -------KRLRR--L-----LLRRLLYRRADAVVVLTEEDRALYYKKF--NKNVVVIPNPLPFPPEEPS---SDLKSKRI 181 (348)
T ss_pred -------hhhHH--H-----HHHHHHHhcCCEEEEeCHHHHHHhhccC--CCCeEEecCCcChhhcccc---CCCCCcEE
Confidence 00000 0 0244556889999999999993333333 5899999999987766421 12246899
Q ss_pred EEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 273 ISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 273 LsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+++||+.+.|+++.+++| ++.+.++..+.++.++|
T Consensus 182 ~~~g~~~~~K~~~~l~~~--~~~l~~~~~~~~l~i~G 216 (348)
T cd03820 182 LAVGRLVPQKGFDLLIEA--WAKIAKKHPDWKLRIVG 216 (348)
T ss_pred EEEEeeccccCHHHHHHH--HHHHHhcCCCeEEEEEe
Confidence 999999999999999999 99997765566777765
No 17
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.50 E-value=4.2e-13 Score=126.51 Aligned_cols=221 Identities=15% Similarity=0.067 Sum_probs=130.4
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
|||+++++ ...||+|+++.+++++|.+.|.+ +.++|...+... ... .+.+.+.......
T Consensus 1 mki~~~~~--p~~gG~~~~~~~la~~L~~~G~~--v~v~~~~~~~~~---~~~---------~~~~~~~~~~~~~----- 59 (371)
T cd04962 1 MKIGIVCY--PTYGGSGVVATELGKALARRGHE--VHFITSSRPFRL---DEY---------SPNIFFHEVEVPQ----- 59 (371)
T ss_pred CceeEEEE--eCCCCccchHHHHHHHHHhcCCc--eEEEecCCCcch---hhh---------ccCeEEEEecccc-----
Confidence 58888874 35689999999999999999855 467765431110 000 0011111110000
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc--ee-ee---cCCeEEEEeecCCcchHHHHhhhhccccc
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA-RI---FGCRVICYTHYPTISLDMISRVREGSSMY 188 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p--~a-~~---~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~ 188 (309)
++..............+.+.+++.+||+++......+..+ ++ +. .+.|.+..+|..... . .
T Consensus 60 -~~~~~~~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~----------~ 126 (371)
T cd04962 60 -YPLFQYPPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--L----------V 126 (371)
T ss_pred -cchhhcchhHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--c----------c
Confidence 0000000011112233455677889998886543222222 12 11 267788778865310 0 0
Q ss_pred CchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC-----
Q 021684 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----- 263 (309)
Q Consensus 189 ~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~----- 263 (309)
. . . ..+. .+.+...+++|.|++.|+..++.+.+.++...++.||+|+++.+.+.....
T Consensus 127 ~------~---~----~~~~----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~ 189 (371)
T cd04962 127 G------Q---D----PSFQ----PATRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKR 189 (371)
T ss_pred c------c---c----ccch----HHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHH
Confidence 0 0 0 0011 113344578999999999999999988754578999999998766542110
Q ss_pred --CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 --ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 --~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
....++..++++||+.++|+++.+|+| ++.+.++ .+.++.++|
T Consensus 190 ~~~~~~~~~~il~~g~l~~~K~~~~li~a--~~~l~~~-~~~~l~i~G 234 (371)
T cd04962 190 RLGAPEGEKVLIHISNFRPVKRIDDVIRI--FAKVRKE-VPARLLLVG 234 (371)
T ss_pred hcCCCCCCeEEEEecccccccCHHHHHHH--HHHHHhc-CCceEEEEc
Confidence 011235678999999999999999999 9998765 456777765
No 18
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.47 E-value=1.5e-12 Score=128.26 Aligned_cols=227 Identities=19% Similarity=0.231 Sum_probs=130.9
Q ss_pred CCCcEEEEE-cCC-CCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccc
Q 021684 32 NRTTSVAFF-HPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (309)
Q Consensus 32 ~~~~rIa~~-hp~-l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~ 109 (309)
.++|||+++ +|+ +...||+|+.+.+++++|.+.| +++.++|...+ .+ +. ..+. +++....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~-~~-~~------~~g~------~v~~~~~-- 117 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEG-VP-QE------FHGA------KVIGSWS-- 117 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCC--CeEEEEecCCC-CC-cc------ccCc------eeeccCC--
Confidence 567899977 543 3466899999999999999987 56677776431 11 00 0011 1111100
Q ss_pred eeecccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-e--eeecCCeEEEEeecCCcchHHHHhhhhccc
Q 021684 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L--ARIFGCRVICYTHYPTISLDMISRVREGSS 186 (309)
Q Consensus 110 ~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~ 186 (309)
...+ .+..+.. .+.......+.+++.+||+++.........+ + ++..+.|++..+|.-. . +... .
T Consensus 118 ~~~~-~~~~~~~---~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~-~-~~~~----~-- 185 (465)
T PLN02871 118 FPCP-FYQKVPL---SLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHV-P-VYIP----R-- 185 (465)
T ss_pred cCCc-cCCCcee---eccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCc-h-hhhh----c--
Confidence 0000 0000000 0000112344567789998886544222222 1 2345788888777532 0 0000 0
Q ss_pred ccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC--
Q 021684 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-- 263 (309)
Q Consensus 187 ~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~-- 263 (309)
+. +....+.+ + .+.++..+.+|.++++|+.+++.+.+.+.. ..++.|++|++|.+.|.....
T Consensus 186 -~~---------~~~~~~~~-~----~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~ 250 (465)
T PLN02871 186 -YT---------FSWLVKPM-W----DIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSE 250 (465)
T ss_pred -cc---------chhhHHHH-H----HHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccH
Confidence 00 01111111 1 123445578999999999999999987633 578999999999988752100
Q ss_pred -------CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 -------ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 -------~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.......+++++||+.++|+++.+++| ++.+ .+.+++|+|
T Consensus 251 ~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a--~~~~----~~~~l~ivG 297 (465)
T PLN02871 251 EMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRV--MERL----PGARLAFVG 297 (465)
T ss_pred HHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHH--HHhC----CCcEEEEEe
Confidence 011135689999999999999999999 7765 345666665
No 19
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.47 E-value=1.2e-12 Score=126.41 Aligned_cols=246 Identities=11% Similarity=-0.022 Sum_probs=133.3
Q ss_pred cEEEEEcCC-CCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhh-hcCcccCCCCeEEEccccceee
Q 021684 35 TSVAFFHPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-RFGVELLHPPKVVHLYRRKWIE 112 (309)
Q Consensus 35 ~rIa~~hp~-l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~-~~~~~l~~~~~~v~l~~~~~~~ 112 (309)
|||+++..+ .-..||+|+.+.+++++|.+.| +++.|+|...........+.... .+..+..+++++..+.. +.+
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~--~~~ 76 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPL--YVP 76 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccc--cCC
Confidence 689988753 4455899999999999999987 55678885421000000000000 00001112223332211 110
Q ss_pred cccCCchhhhHHHHhHHHHHHHHH-h--ccCCcEEEeCCCCccccce----eeecCCeEEEEeecCCcchHHHHhhhhcc
Q 021684 113 ESTYPRFTMIGQSFGSVYLSWEAL-C--KFTPLYYFDTSGYAFTYPL----ARIFGCRVICYTHYPTISLDMISRVREGS 185 (309)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~~~~~l-~--~~~pdv~iss~~~a~~~p~----a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~ 185 (309)
. .......+.........+++.+ + +.+||+++.+.+..+..+. ++..+.|.+..+|.-. .+... ..
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~--~~~~~---~~- 149 (412)
T PRK10307 77 K-QPSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYE--VDAAF---GL- 149 (412)
T ss_pred C-CccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCC--HHHHH---Hh-
Confidence 0 0001111111111111112221 1 2679998876543222221 2345677776666421 11100 00
Q ss_pred cccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCC
Q 021684 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE 264 (309)
Q Consensus 186 ~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~ 264 (309)
.+ .. ...+.+++..+.+++++.+|.|++.|+.+++.+++. +. ++++.||||++|.+.+...+..
T Consensus 150 -~~----------~~---~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~ 214 (412)
T PRK10307 150 -GL----------LK---GGKVARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADA 214 (412)
T ss_pred -CC----------cc---CcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCcc
Confidence 00 00 011223344456677789999999999999999875 44 5789999999998877521100
Q ss_pred ----------CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 265 ----------RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 265 ----------~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.+.++..++++||+.++|+++.+|+| ++.+.++ .+.++.++|
T Consensus 215 ~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a--~~~l~~~-~~~~l~ivG 266 (412)
T PRK10307 215 DVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDA--ARRLRDR-PDLIFVICG 266 (412)
T ss_pred chHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHH--HHHhccC-CCeEEEEEC
Confidence 01224689999999999999999999 9988543 445666665
No 20
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.47 E-value=7.1e-13 Score=127.38 Aligned_cols=234 Identities=13% Similarity=0.070 Sum_probs=129.4
Q ss_pred EEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCc
Q 021684 39 FFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPR 118 (309)
Q Consensus 39 ~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~ 118 (309)
.++|..+..||+|+++.+++++|.+.| +++.++|.... .... . ...+.+++++.......... ...
T Consensus 11 ~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~-~~~~--~------~~~~~~~~~v~~~~~~~~~~---~~~ 76 (405)
T TIGR03449 11 LQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATR-PSQP--P------VVEVAPGVRVRNVVAGPYEG---LDK 76 (405)
T ss_pred cccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccC-CCCC--C------ccccCCCcEEEEecCCCccc---CCH
Confidence 345666667999999999999999988 56678875421 1000 0 00122233444332111110 011
Q ss_pred hhhhHHHHhHHHHHH-HHHh--ccCCcEEEeCCCCccccce--eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhh
Q 021684 119 FTMIGQSFGSVYLSW-EALC--KFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (309)
Q Consensus 119 ~~l~~~~l~~~~~~~-~~l~--~~~pdv~iss~~~a~~~p~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y 193 (309)
..+...........+ ..++ ..+||+++.........+. ++..+.|.|.-+|... .... . +
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~----~~~~---~--------~ 141 (405)
T TIGR03449 77 EDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLA----AVKN---A--------A 141 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchH----HHHH---H--------h
Confidence 111110000111112 2223 2479999865432211221 2234677777677542 0000 0 0
Q ss_pred hhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC-------CC
Q 021684 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-------ER 265 (309)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~-------~~ 265 (309)
... .......+ .....+...+.+|.++++|+.+++.+.+.++. +.++.||+|+||.+.+..... .-
T Consensus 142 ~~~---~~~~~~~~---~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~ 215 (405)
T TIGR03449 142 LAD---GDTPEPEA---RRIGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGL 215 (405)
T ss_pred ccC---CCCCchHH---HHHHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCC
Confidence 000 00000011 11123445678999999999999999998886 567899999999877752110 00
Q ss_pred CCCCcEEEEEcCCccccChhhhhccchhHhhhcccCC--CCCccCC
Q 021684 266 STEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLAS--AQTPICG 309 (309)
Q Consensus 266 ~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~--~~~~~~~ 309 (309)
..++.+++++||+.++|+++.+|+| ++.+.++..+ -++.+||
T Consensus 216 ~~~~~~i~~~G~l~~~K~~~~li~a--~~~l~~~~~~~~~~l~ivG 259 (405)
T TIGR03449 216 PLDTKVVAFVGRIQPLKAPDVLLRA--VAELLDRDPDRNLRVIVVG 259 (405)
T ss_pred CCCCcEEEEecCCCcccCHHHHHHH--HHHHHhhCCCcceEEEEEe
Confidence 1235789999999999999999999 9998666543 4566665
No 21
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.44 E-value=5.5e-13 Score=126.76 Aligned_cols=210 Identities=17% Similarity=0.241 Sum_probs=123.3
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
|||+++.+.+...||+|+++.+++++|.+.+.++++.+++.... ......+.+. +-...+ .+.+
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~-~~~~~~~~~~--~~~~~~----~~~~--------- 64 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDK-MDKAWLKEIK--YAQSFS----NIKL--------- 64 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCC-CChHHHHhcc--hhcccc----cchh---------
Confidence 79999999887779999999999999999866687777775431 1111111110 000000 0001
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-ee-eecC--CeEEEEeecCCcchHHHHhhhhcccccCc
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFG--CRVICYTHYPTISLDMISRVREGSSMYNN 190 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a-~~~~--~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~ 190 (309)
+..... .......+.+++.+||++++....+.... ++ +..+ .+++..+|... .. .
T Consensus 65 --~~~~~~----~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~------~~-------~-- 123 (359)
T PRK09922 65 --SFLRRA----KHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSL------DH-------K-- 123 (359)
T ss_pred --hhhccc----HHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcc------cc-------c--
Confidence 000000 01122235577889999997754222111 12 2223 34455566532 00 0
Q ss_pred hhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCCCCCC
Q 021684 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (309)
Q Consensus 191 ~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~~~~~ 269 (309)
. ...+. ....+|.++++|+++++.+.+. ++ +.++.|||||+|.+.+.. +......+
T Consensus 124 ---------~---~~~~~---------~~~~~d~~i~~S~~~~~~~~~~-~~~~~ki~vi~N~id~~~~~~-~~~~~~~~ 180 (359)
T PRK09922 124 ---------K---HAECK---------KITCADYHLAISSGIKEQMMAR-GISAQRISVIYNPVEIKTIII-PPPERDKP 180 (359)
T ss_pred ---------c---hhhhh---------hhhcCCEEEEcCHHHHHHHHHc-CCCHHHEEEEcCCCCHHHccC-CCcccCCC
Confidence 0 00000 0156999999999999999874 55 567999999999765532 11111235
Q ss_pred cEEEEEcCCc--cccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 270 PAIISVAQFR--PEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 270 ~~iLsVGRl~--p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..++++||+. ++|+++.+++| ++.+.. +.++.+.|
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a--~~~~~~---~~~l~ivG 217 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDG--LSQTTG---EWQLHIIG 217 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHH--HHhhCC---CeEEEEEe
Confidence 7899999996 56999999999 887743 33444443
No 22
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.42 E-value=3.3e-12 Score=121.55 Aligned_cols=222 Identities=17% Similarity=0.189 Sum_probs=127.7
Q ss_pred cEEEEEcCCCCC--CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceee
Q 021684 35 TSVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (309)
Q Consensus 35 ~rIa~~hp~l~~--gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~ 112 (309)
|||+++++++-- .||+|+.+.+++++|.+. .+++ +.+... .. .. .+.+++... ..+.
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~--v~~~~~--~~------~~-------~~~~~~~~~--~~~~- 59 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVD--VRCFGD--QR------FD-------SEGLTVKGY--RPWS- 59 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCee--EEcCCC--ch------hc-------CCCeEEEEe--cChh-
Confidence 689999887742 599999999999999886 4554 444322 11 00 011112111 1110
Q ss_pred cccCCchhhhHHHHhHHHHHHH-HHhccCCcEEEeCCCCccccce-e-eecCCeEEEEeecCCcchHHHHhhhhcccccC
Q 021684 113 ESTYPRFTMIGQSFGSVYLSWE-ALCKFTPLYYFDTSGYAFTYPL-A-RIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (309)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~~~~-~l~~~~pdv~iss~~~a~~~p~-a-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (309)
......+.+......+. .....++|+++....++...+. + +..+.|++...|... .. + . |.
T Consensus 60 -----~~~~~~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~-~~---~-~------~~ 123 (388)
T TIGR02149 60 -----ELKEANKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAHSLE-PL---R-P------WK 123 (388)
T ss_pred -----hccchhhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEeeccc-cc---c-c------cc
Confidence 00001111111111111 1223469999976543332222 2 245788888888642 00 0 0 00
Q ss_pred chhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHh-CC-CCCceEecCCCCCCCCcccCC----
Q 021684 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW-GI-PDRIKRVYPPCDTSGLQVLPL---- 263 (309)
Q Consensus 190 ~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~-~~-~~~~~VIYPPVd~~~~~~~~~---- 263 (309)
.. . ... .+ .+..++.+...+.+|.|+++|+.+++.+.+.+ +. +.++.||+|++|.+.+.....
T Consensus 124 ~~-~------~~~---~~-~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~ 192 (388)
T TIGR02149 124 EE-Q------LGG---GY-KLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVL 192 (388)
T ss_pred cc-c------ccc---ch-hHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHHH
Confidence 00 0 000 01 12233455667889999999999999999988 44 567899999999877642110
Q ss_pred ---CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 ---ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 ---~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..+.+.++++++||++++|+++.+++| ++++.. +.++.+||
T Consensus 193 ~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a--~~~l~~---~~~l~i~g 236 (388)
T TIGR02149 193 DRYGIDRSRPYILFVGRITRQKGVPHLLDA--VHYIPK---DVQVVLCA 236 (388)
T ss_pred HHhCCCCCceEEEEEcccccccCHHHHHHH--HHHHhh---cCcEEEEe
Confidence 011234689999999999999999999 998853 34555553
No 23
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.41 E-value=6.9e-12 Score=115.55 Aligned_cols=218 Identities=20% Similarity=0.170 Sum_probs=131.6
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||+++++.+ ..||+|+++.+++++|.+.+. ++.+++... .....+.+.. .+ +++..+.....
T Consensus 1 ~i~~i~~~~-~~gG~~~~~~~l~~~l~~~~~--~v~~~~~~~---~~~~~~~~~~-~~------i~v~~~~~~~~----- 62 (365)
T cd03807 1 KVLHVITGL-DVGGAERMLVRLLKGLDRDRF--EHVVISLTD---RGELGEELEE-AG------VPVYCLGKRPG----- 62 (365)
T ss_pred CeEEEEeec-cCccHHHHHHHHHHHhhhccc--eEEEEecCc---chhhhHHHHh-cC------CeEEEEecccc-----
Confidence 689999999 558999999999999988764 445555432 1112122221 12 22333321110
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-ee-ee-cCCeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a-~~-~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
... ...+....+.+++.+||+++....+..... +. +. .+.+.+...|.-....
T Consensus 63 ~~~-------~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------- 118 (365)
T cd03807 63 RPD-------PGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDL----------------- 118 (365)
T ss_pred ccc-------HHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccc-----------------
Confidence 001 112223345567789998886544332222 21 22 3566666667653000
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC-C------
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-E------ 264 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~-~------ 264 (309)
..... .....+.....+.+|.++++|+.+++.+.+. +. ..++.|++|++|.+.+..... .
T Consensus 119 -------~~~~~----~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 186 (365)
T cd03807 119 -------GKKST----RLVARLRRLLSSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLDARARLREE 186 (365)
T ss_pred -------cchhH----hHHHHHHHHhccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcccchHHHHHh
Confidence 00001 1112223444577999999999999999986 43 578899999998776642110 0
Q ss_pred --CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 265 --RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 265 --~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
-+.+...++++||+.++|+++.+++| ++.+.++..+-++.++|
T Consensus 187 ~~~~~~~~~i~~~G~~~~~K~~~~li~a--~~~l~~~~~~~~l~i~G 231 (365)
T cd03807 187 LGLPEDTFLIGIVARLHPQKDHATLLRA--AALLLKKFPNARLLLVG 231 (365)
T ss_pred cCCCCCCeEEEEecccchhcCHHHHHHH--HHHHHHhCCCeEEEEec
Confidence 01234688999999999999999999 99997775555677665
No 24
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.40 E-value=1.3e-11 Score=112.99 Aligned_cols=227 Identities=18% Similarity=0.141 Sum_probs=136.9
Q ss_pred EEEEEcCCCCCC-ChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 36 rIa~~hp~l~~g-GGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
||+++.+..... ||++.++.+++++|.+.+ +++.+++...+... . .. ..... ..... .
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~--~---~~---~~~~~---~~~~~-~------- 59 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARG--HEVTVLTPGDGGLP--D---EE---EVGGI---VVVRP-P------- 59 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCC--c---ee---eecCc---ceecC-C-------
Confidence 578888877555 999999999999999876 56677775431110 0 00 00000 00000 0
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce--eeecCCeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
...................+.++..+||+++........... ++..+.|.+..+|.+.. .. ..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-~~-----------~~--- 124 (374)
T cd03801 60 PLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEF-GR-----------PG--- 124 (374)
T ss_pred cccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchh-hc-----------cc---
Confidence 000000111111122223344667789988866553322221 22457888999998751 00 00
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcc------cCCCC
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQV------LPLER 265 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~------~~~~~ 265 (309)
. . ................+.+|.+++.|+.+++.+.+.++. ..++.+++||++.+.+.. .....
T Consensus 125 ---~---~---~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd03801 125 ---N---E---LGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGI 195 (374)
T ss_pred ---c---c---hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCC
Confidence 0 0 011112222334455678999999999999999999984 358999999999877641 11111
Q ss_pred CCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 266 STEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 266 ~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..+...++++||+.++|+++.+++| +..+.++..+-++.++|
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~~i~~--~~~~~~~~~~~~l~i~G 237 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDLLLEA--LAKLRKEYPDVRLVIVG 237 (374)
T ss_pred cCCCeEEEEecchhhhcCHHHHHHH--HHHHhhhcCCeEEEEEe
Confidence 2235789999999999999999999 99987776556666665
No 25
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.40 E-value=7.9e-12 Score=116.67 Aligned_cols=213 Identities=14% Similarity=0.123 Sum_probs=129.2
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
+|.++++.+ ..||+|+++.+++++|.+.|. ++.+++...+... ... . ... ....+...+
T Consensus 1 ~il~~~~~~-~~gG~~~~~~~l~~~L~~~g~--~v~v~~~~~~~~~-~~~---~-----~~~---~~~~~~~~~------ 59 (360)
T cd04951 1 KILYVITGL-GLGGAEKQVVDLADQFVAKGH--QVAIISLTGESEV-KPP---I-----DAT---IILNLNMSK------ 59 (360)
T ss_pred CeEEEecCC-CCCCHHHHHHHHHHhcccCCc--eEEEEEEeCCCCc-cch---h-----hcc---ceEEecccc------
Confidence 478888888 678999999999999988874 4566654321110 000 0 000 011111000
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-ee-ee-cCCeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a-~~-~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
..... +.......+.+++.+||+++....++.... +. +. .+.+.+..+|....
T Consensus 60 -~~~~~----~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~------------------- 115 (360)
T cd04951 60 -NPLSF----LLALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNE------------------- 115 (360)
T ss_pred -cchhh----HHHHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCc-------------------
Confidence 00111 112222345567789998887654332222 11 12 24567777786530
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC--------
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-------- 263 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~-------- 263 (309)
.+..+. +.++.....++.+++.|...++.+.+..+. ++++.+++|++|++.+.....
T Consensus 116 -------~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~ 181 (360)
T cd04951 116 -------GGRLRM-------LAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNA 181 (360)
T ss_pred -------hhHHHH-------HHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHH
Confidence 001111 112333355788999999999999988654 678999999999877642110
Q ss_pred -CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 -ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 -~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
....+...++++||+.++|+++.+|+| ++.+.++..+-++.++|
T Consensus 182 ~~~~~~~~~~l~~g~~~~~kg~~~li~a--~~~l~~~~~~~~l~i~G 226 (360)
T cd04951 182 LGVKNDTFVILAVGRLVEAKDYPNLLKA--FAKLLSDYLDIKLLIAG 226 (360)
T ss_pred cCcCCCCEEEEEEeeCchhcCcHHHHHH--HHHHHhhCCCeEEEEEc
Confidence 011235689999999999999999999 99987766566777765
No 26
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.40 E-value=2.8e-11 Score=117.63 Aligned_cols=80 Identities=18% Similarity=0.220 Sum_probs=59.9
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCc---cc-CCCCCCCCcEEEEEcCC--ccccChhhhh
Q 021684 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ---VL-PLERSTEYPAIISVAQF--RPEKVRYKLI 288 (309)
Q Consensus 215 ~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~---~~-~~~~~~~~~~iLsVGRl--~p~Kn~~~lI 288 (309)
+....+.++.+|+.|+|+++.+.+.++ ..++.||||+||++.+. .. +.........++++||. .+.|+++.+|
T Consensus 184 ~~~~~~~~~~iV~~S~~l~~~~~~~~~-~~~i~vI~NGid~~~~~~~~~~~~~~~~~~~~~il~v~~~~~~~~Kg~~~li 262 (405)
T PRK10125 184 FREMLALGCQFISPSQHVADAFNSLYG-PGRCRIINNGIDMATEAILAELPPVRETQGKPKIAVVAHDLRYDGKTDQQLV 262 (405)
T ss_pred HHHHhhcCcEEEEcCHHHHHHHHHHcC-CCCEEEeCCCcCcccccccccccccccCCCCCEEEEEEeccccCCccHHHHH
Confidence 344446789999999999999999887 57899999999975322 11 11111235689999994 3789999999
Q ss_pred ccchhHhhh
Q 021684 289 STSCLEEIR 297 (309)
Q Consensus 289 ~A~~f~~l~ 297 (309)
+| ++.+.
T Consensus 263 ~A--~~~l~ 269 (405)
T PRK10125 263 RE--MMALG 269 (405)
T ss_pred HH--HHhCC
Confidence 99 88764
No 27
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.38 E-value=2e-11 Score=113.55 Aligned_cols=209 Identities=16% Similarity=0.078 Sum_probs=124.7
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||+|+.++....||+|+++.+++++|.+.+.+ +.+++...... .. . .....+.......
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~--v~v~~~~~~~~--~~----~---~~~~~~~~~~~~~---------- 59 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPD--VLVVSVAALYP--SL----L---YGGEQEVVRVIVL---------- 59 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCe--EEEEEeecccC--cc----c---CCCcccceeeeec----------
Confidence 69999999976999999999999999998854 45555432111 00 0 0000000000000
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce----ee----ecCCeEEEEeecCCcchHHHHhhhhcccc
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL----AR----IFGCRVICYTHYPTISLDMISRVREGSSM 187 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~----a~----~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~ 187 (309)
+... ......+.++..+||+++.........+. .. ..+.|+++.+|...... .
T Consensus 60 ~~~~--------~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---~-------- 120 (366)
T cd03822 60 DNPL--------DYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHE---P-------- 120 (366)
T ss_pred CCch--------hHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccc---c--------
Confidence 0000 11122445677899988865421111121 11 15788999999962000 0
Q ss_pred cCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC--CCCceEecCCCCCCCCcccCC--
Q 021684 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQVLPL-- 263 (309)
Q Consensus 188 ~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~--~~~~~VIYPPVd~~~~~~~~~-- 263 (309)
....+ .+.+...+.+|.+++.|+ +..++.+.. +.++.||+||++...+.....
T Consensus 121 ------------~~~~~--------~~~~~~~~~~d~ii~~s~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 177 (366)
T cd03822 121 ------------RPGDR--------ALLRLLLRRADAVIVMSS---ELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLK 177 (366)
T ss_pred ------------chhhh--------HHHHHHHhcCCEEEEeeH---HHHHHHHhhcCCCcEEEeCCCCcCcccCCchhhH
Confidence 00001 112333478999999973 333333321 379999999998776643110
Q ss_pred --CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 --ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 --~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
....++..++++||++++|+++.+++| ++.+.++..+-++.+||
T Consensus 178 ~~~~~~~~~~i~~~G~~~~~K~~~~ll~a--~~~~~~~~~~~~l~i~G 223 (366)
T cd03822 178 ALGGLDGRPVLLTFGLLRPYKGLELLLEA--LPLLVAKHPDVRLLVAG 223 (366)
T ss_pred hhcCCCCCeEEEEEeeccCCCCHHHHHHH--HHHHHhhCCCeEEEEec
Confidence 012235789999999999999999999 99998876677888876
No 28
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.37 E-value=1.1e-11 Score=117.50 Aligned_cols=93 Identities=24% Similarity=0.291 Sum_probs=73.2
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC--------CCCCCCcEEEEEcCCccccChh
Q 021684 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL--------ERSTEYPAIISVAQFRPEKVRY 285 (309)
Q Consensus 215 ~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~--------~~~~~~~~iLsVGRl~p~Kn~~ 285 (309)
..+..+.+|.++++|+..++.+.+.++. ..++.||+|++|.+.+..... ....++.+++++||+.++|+++
T Consensus 157 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~ 236 (398)
T cd03800 157 EERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGID 236 (398)
T ss_pred HHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHH
Confidence 4456688999999999999999999874 445899999999877642111 1112357899999999999999
Q ss_pred hhhccchhHhhhcccCCCCCccCC
Q 021684 286 KLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 286 ~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.+++| ++.+.++..+.++.++|
T Consensus 237 ~ll~a--~~~l~~~~~~~~l~i~G 258 (398)
T cd03800 237 TLIRA--YAELPELRERANLVIVG 258 (398)
T ss_pred HHHHH--HHHHHHhCCCeEEEEEE
Confidence 99999 99998765666777765
No 29
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.36 E-value=3.5e-11 Score=112.17 Aligned_cols=216 Identities=13% Similarity=0.027 Sum_probs=125.0
Q ss_pred EEEEEcCCCCC-CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 36 SVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 36 rIa~~hp~l~~-gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
||.++.+++.. .||+|+++.+++++|.+.| +++.+++...+... ... . ..+ ..+..+.. +....
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~---~~~-~-~~~------~~~~~~~~--~~~~~ 65 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKG---RDE-E-RNG------HRVIRAPS--LLNVA 65 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcc---hhh-h-ccC------ceEEEeec--ccccc
Confidence 46666665544 8999999999999999887 45566665431111 000 0 001 01111100 00000
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceee--ecCCeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~--~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
..+... .....++ ++..+||+++............. ..+.+.+...|.....
T Consensus 66 ~~~~~~-------~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------------ 119 (357)
T cd03795 66 STPFSP-------SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVK------------------ 119 (357)
T ss_pred cccccH-------HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcChhhc------------------
Confidence 000000 0111111 44678997775543222111111 2356777777864310
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC------CCC
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ERS 266 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~------~~~ 266 (309)
..... ..+..+.++..+.+|.+++.|+.+++.+...++.+.++.+|+|+++.+.+..... ...
T Consensus 120 -------~~~~~----~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~~ 188 (357)
T cd03795 120 -------QKLLL----KLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRA 188 (357)
T ss_pred -------cchhh----hhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHhhcCC
Confidence 00011 1222234445678999999999999999887764578999999999887653211 112
Q ss_pred CCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 267 TEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 267 ~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..+..++++||+.++|+++.+++| ++++. +-++.+||
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a--~~~l~----~~~l~i~G 225 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEA--AAALP----DAPLVIVG 225 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHH--HHhcc----CcEEEEEe
Confidence 236789999999999999999999 88875 55666665
No 30
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.35 E-value=2.4e-11 Score=112.37 Aligned_cols=229 Identities=17% Similarity=0.140 Sum_probs=131.1
Q ss_pred EEEEEcCCCC-CCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 36 rIa~~hp~l~-~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
||.++.+.+. ..||+|+++.+++++|.+.| +++.+++...+... .... ........... .. .
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~----~~~~-----~~~~~~~~~~~-~~--~--- 63 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLG--HEVTVATTDAGGDP----LLVA-----LNGVPVKLFSI-NV--A--- 63 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcC--CcEEEEecCCCCcc----chhh-----ccCceeeeccc-ch--h---
Confidence 5888888874 78899999999999998877 55567765431110 0000 00000000000 00 0
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCc-ccccee---eecCCeEEEEeecCCcchHHHHhhhhcccccCc
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYA-FTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a-~~~p~a---~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~ 190 (309)
.. .......+.............+||+++....+. ...+.. +..+.|.+.+.|... .. +..
T Consensus 64 -~~-~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~------------~~~ 128 (375)
T cd03821 64 -YG-LNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGML-DP------------WAL 128 (375)
T ss_pred -hh-hhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccc-cc------------ccc
Confidence 00 000000000111111223346799777553211 111211 234678888888753 10 000
Q ss_pred hhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC-------
Q 021684 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------- 263 (309)
Q Consensus 191 ~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~------- 263 (309)
.. ....+.++.. .........+|.++++|+.......+.+. ..++.|++|+++.+.+.....
T Consensus 129 ----~~---~~~~~~~~~~---~~~~~~~~~~~~i~~~s~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 197 (375)
T cd03821 129 ----PH---KALKKRLAWF---LFERRLLQAAAAVHATSEQEAAEIRRLGL-KAPIAVIPNGVDIPPFAALPSRGRRRKF 197 (375)
T ss_pred ----cc---chhhhHHHHH---HHHHHHHhcCCEEEECCHHHHHHHHhhCC-cccEEEcCCCcChhccCcchhhhhhhhc
Confidence 00 0111112211 11345567899999999998888877654 578999999999887753210
Q ss_pred CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 ~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
....++..++++||+.++|+++.+++| ++.+.++..+.++.++|
T Consensus 198 ~~~~~~~~i~~~G~~~~~K~~~~li~a--~~~l~~~~~~~~l~i~G 241 (375)
T cd03821 198 PILPDKRIILFLGRLHPKKGLDLLIEA--FAKLAERFPDWHLVIAG 241 (375)
T ss_pred cCCCCCcEEEEEeCcchhcCHHHHHHH--HHHhhhhcCCeEEEEEC
Confidence 122346789999999999999999999 99998876677888776
No 31
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.35 E-value=6.8e-12 Score=118.09 Aligned_cols=146 Identities=18% Similarity=0.258 Sum_probs=99.0
Q ss_pred HHhccCCcEEEeCCCCccccc-e--eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHH
Q 021684 135 ALCKFTPLYYFDTSGYAFTYP-L--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (309)
Q Consensus 135 ~l~~~~pdv~iss~~~a~~~p-~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~ 211 (309)
.+++.+||+++...+.. ..+ + ++..+.|+++..|........ . . ....+ ++.+
T Consensus 77 ~~~~~~~dvvh~~~~~~-~~~~~~~~~~~~~p~i~~~h~~~~~~~~-~-------------~------~~~~~---~~~~ 132 (367)
T cd05844 77 LLRRHRPDLVHAHFGFD-GVYALPLARRLGVPLVVTFHGFDATTSL-A-------------L------LLRSR---WALY 132 (367)
T ss_pred HHHhhCCCEEEeccCch-HHHHHHHHHHcCCCEEEEEeCccccccc-h-------------h------hcccc---hhHH
Confidence 46678999999765422 222 1 234578999988864311000 0 0 00000 1222
Q ss_pred HHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccccChhhhhcc
Q 021684 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLIST 290 (309)
Q Consensus 212 ~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~Kn~~~lI~A 290 (309)
...++...+.+|.++++|+++++.+.+. |. +.++.|++|++|.+.+... .....+..++++||+.++|+++.+++|
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~--~~~~~~~~i~~~G~~~~~K~~~~li~a 209 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLAL-GFPPEKVHVHPIGVDTAKFTPA--TPARRPPRILFVGRFVEKKGPLLLLEA 209 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHHc-CCCHHHeEEecCCCCHHhcCCC--CCCCCCcEEEEEEeeccccChHHHHHH
Confidence 2334555688999999999999999886 43 5678999999998777521 122235789999999999999999999
Q ss_pred chhHhhhcccCCCCCccCC
Q 021684 291 SCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 291 ~~f~~l~~~~~~~~~~~~~ 309 (309)
++.+.++..+-.+.++|
T Consensus 210 --~~~l~~~~~~~~l~ivG 226 (367)
T cd05844 210 --FARLARRVPEVRLVIIG 226 (367)
T ss_pred --HHHHHHhCCCeEEEEEe
Confidence 99998776666777776
No 32
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.35 E-value=6.6e-11 Score=108.57 Aligned_cols=221 Identities=14% Similarity=0.068 Sum_probs=126.9
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||.++.+. .||+++++.+++++|.+.| +++.+++...+ .. . ... ...++...+.....
T Consensus 1 kIl~i~~~---~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~-~~-~---~~~-------~~~~~~~~~~~~~~----- 58 (359)
T cd03808 1 KILHIVTV---DGGLYSFRLPLIKALRAAG--YEVHVVAPPGD-EL-E---ELE-------ALGVKVIPIPLDRR----- 58 (359)
T ss_pred CeeEEEec---chhHHHHHHHHHHHHHhcC--CeeEEEecCCC-cc-c---ccc-------cCCceEEecccccc-----
Confidence 47777777 6899999999999998877 55567765431 11 0 000 11112222211100
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-ee-eecC-CeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a-~~~~-~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
... .+..+.......+.+++.+||+++.......... +. +..+ .+++..+|.... . ..
T Consensus 59 --~~~-~~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-----------~~--- 119 (359)
T cd03808 59 --GIN-PFKDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGF--V-----------FT--- 119 (359)
T ss_pred --ccC-hHhHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcch--h-----------hc---
Confidence 000 0111112223345567789998876543232222 11 2123 334444454320 0 00
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC--CCCceEecCCCCCCCCcccCCCCCCCCc
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQVLPLERSTEYP 270 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~--~~~~~VIYPPVd~~~~~~~~~~~~~~~~ 270 (309)
.. ......+..++++..+.+|.++++|+..++.+.+.++. .....+++++++.+.+.........++.
T Consensus 120 -------~~---~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T cd03808 120 -------SG---GLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEPIPEDDP 189 (359)
T ss_pred -------cc---hhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccccCCCCc
Confidence 00 00223333445666688999999999999999998863 2345555666676655422110122467
Q ss_pred EEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 271 AIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 271 ~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.++++||+.++|+++.+++| ++.+.++..+-++.++|
T Consensus 190 ~i~~~G~~~~~k~~~~li~~--~~~l~~~~~~~~l~i~G 226 (359)
T cd03808 190 VFLFVARLLKDKGIDELLEA--ARILKAKGPNVRLLLVG 226 (359)
T ss_pred EEEEEeccccccCHHHHHHH--HHHHHhcCCCeEEEEEc
Confidence 99999999999999999999 99997765666777765
No 33
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.34 E-value=2.6e-11 Score=112.33 Aligned_cols=191 Identities=15% Similarity=0.045 Sum_probs=119.1
Q ss_pred cEEEEEcCCCC-----CCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccc
Q 021684 35 TSVAFFHPNTN-----DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (309)
Q Consensus 35 ~rIa~~hp~l~-----~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~ 109 (309)
|||+++-+++. ..||+|+++.+++++|.+.| +++.+++...+... .... ... .. ..
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~----~~~~-----~~~------~~--~~ 61 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTA----APLV-----PVV------PE--PL 61 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcc----ccee-----ecc------CC--Cc
Confidence 68999988752 68899999999999999887 66677776542110 0000 000 00 00
Q ss_pred eeecccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceeeecCCeEEEEeecCCcchHHHHhhhhcccccC
Q 021684 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (309)
Q Consensus 110 ~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (309)
.... ....+..........+.+++.+||+++......... .++..+.|++...|..... +
T Consensus 62 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~v~~~h~~~~~-------------~- 121 (335)
T cd03802 62 RLDA-----PGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP-FARPLPVPVVTTLHGPPDP-------------E- 121 (335)
T ss_pred cccc-----chhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh-hhcccCCCEEEEecCCCCc-------------c-
Confidence 0000 000001111222233456778899988765433222 3334567888888887510 0
Q ss_pred chhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCCCCCC
Q 021684 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEY 269 (309)
Q Consensus 190 ~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~ 269 (309)
. .. ........+.+++.|+..++..... .++.||||++|++.+.. ...++
T Consensus 122 ----------~---~~---------~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~----~~~~~ 171 (335)
T cd03802 122 ----------L---LK---------LYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPF----RGPKG 171 (335)
T ss_pred ----------c---ch---------HHHhhCcCCeEEEecHHHHhhcccc----cccEEecCCcChhhCCC----CCCCC
Confidence 0 00 0122356889999999998876554 58999999999988862 11246
Q ss_pred cEEEEEcCCccccChhhhhccchhHhh
Q 021684 270 PAIISVAQFRPEKVRYKLISTSCLEEI 296 (309)
Q Consensus 270 ~~iLsVGRl~p~Kn~~~lI~A~~f~~l 296 (309)
+.++++||+.++|+++.+|+| +++.
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~--~~~~ 196 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRA--ARRA 196 (335)
T ss_pred CEEEEEEeeccccCHHHHHHH--HHhc
Confidence 799999999999999999999 7653
No 34
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.34 E-value=3.3e-11 Score=111.35 Aligned_cols=220 Identities=13% Similarity=0.015 Sum_probs=123.5
Q ss_pred EEEEEcCCCCC--CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeec
Q 021684 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (309)
Q Consensus 36 rIa~~hp~l~~--gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~ 113 (309)
||.|+-+.+.. .||+|+++.+++++|.+.| +++.+++....... .. .. ... ..............
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~-~~-------~~--~~~-~~~~~~~~~~~~~~ 67 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPR-QD-------KE--VIG-VVVYGRPIDEVLRS 67 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCC-cc-------cc--ccc-ceeeccccccccCC
Confidence 46666555433 4899999999999999887 55566665432111 00 00 000 00000000000000
Q ss_pred cc-CCchhh-hHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce---eeecCCeEEEEeecCCcchHHHHhhhhccccc
Q 021684 114 ST-YPRFTM-IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (309)
Q Consensus 114 ~~-~~~~~l-~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~---a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~ 188 (309)
.. ...... .+..........+.+++.+||+++..........+ ++..+.|.+...|......
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------------- 134 (359)
T cd03823 68 ALPRDLFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------------- 134 (359)
T ss_pred CchhhhhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec-------------
Confidence 00 000000 00000111223345667899988766542222221 1234678888888653000
Q ss_pred CchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCCCCC
Q 021684 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTE 268 (309)
Q Consensus 189 ~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~ 268 (309)
...... ....|.++++|+++++.+.+.+..+.++.|++|++|.+.+.........+
T Consensus 135 -------------~~~~~~-----------~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~~~~~~ 190 (359)
T cd03823 135 -------------PRQGLF-----------KKGGDAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRRAPPGG 190 (359)
T ss_pred -------------chhhhh-----------ccCCCEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhccccccCCCCC
Confidence 000000 02239999999999999998764346899999999988775322112223
Q ss_pred CcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 269 YPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 269 ~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+..++++||+.++|+++.+++| ++.+.+ .+-++.+||
T Consensus 191 ~~~i~~~G~~~~~k~~~~li~~--~~~l~~--~~~~l~i~G 227 (359)
T cd03823 191 RLRFGFIGQLTPHKGVDLLLEA--FKRLPR--GDIELVIVG 227 (359)
T ss_pred ceEEEEEecCccccCHHHHHHH--HHHHHh--cCcEEEEEc
Confidence 5688999999999999999999 998865 445666665
No 35
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.32 E-value=3.2e-11 Score=112.38 Aligned_cols=213 Identities=15% Similarity=0.091 Sum_probs=129.9
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||+++.+.+ . +|+|+++++++++|.+.| +++.+++....... .. ..... .... ...+
T Consensus 1 ki~~~~~~~-~-~~~~~~~~~~~~~L~~~g--~~v~v~~~~~~~~~-~~----~~~~~-~~~~-----~~~~-------- 57 (355)
T cd03799 1 KIAYLVKEF-P-RLSETFILREILALEAAG--HEVEIFSLRPPEDT-LV----HPEDR-AELA-----RTRY-------- 57 (355)
T ss_pred CEEEECCCC-C-CcchHHHHHHHHHHHhCC--CeEEEEEecCcccc-cc----ccccc-cccc-----chHH--------
Confidence 589999998 3 359999999999999887 55677775431110 00 00000 0000 0000
Q ss_pred CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc--ee-eecCCeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p--~a-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
....+..+.......+.++..+||+++.......... +. +..+.+.+..+|.+.. +..
T Consensus 58 ---~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~-- 118 (355)
T cd03799 58 ---LARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI--------------FRS-- 118 (355)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc--------------ccc--
Confidence 0001111112222334455678998887644221111 11 2346778888887641 000
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCCCCCCcE
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPA 271 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~~~~~~~ 271 (309)
.. . ..++...+.+|.++++|++.++.+++.++. ..++.|++|++|.+.+..........+..
T Consensus 119 -------~~--~--------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~~~~~~~~~ 181 (355)
T cd03799 119 -------PD--A--------IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPPPGEPLR 181 (355)
T ss_pred -------Cc--h--------HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccccccCCCeE
Confidence 00 0 112333477999999999999999998664 67899999999987775321011223568
Q ss_pred EEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 272 IISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 272 iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
++++||+.++|+++.+++| ++.+.++..+.++.++|
T Consensus 182 i~~~g~~~~~k~~~~l~~~--~~~l~~~~~~~~l~i~G 217 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEA--LALLKDRGIDFRLDIVG 217 (355)
T ss_pred EEEEeeeccccCHHHHHHH--HHHHhhcCCCeEEEEEE
Confidence 9999999999999999999 99987765555666654
No 36
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.30 E-value=5.7e-11 Score=113.21 Aligned_cols=214 Identities=16% Similarity=0.114 Sum_probs=117.4
Q ss_pred EEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 36 rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
||++|-+.+ .+||+|+++.++++.|.+.|.++ .+++... .++.++..+ .+...+. +... .+
T Consensus 1 ki~~~~~~~-~~GGv~~~~~~l~~~l~~~g~~v--~~~~~~~---~~~~~~~~~-~~~~~~~-g~~~-~~---------- 61 (372)
T cd03792 1 KVLHVNSTP-YGGGVAEILHSLVPLMRDLGVDT--RWEVIKG---DPEFFNVTK-KFHNALQ-GADI-EL---------- 61 (372)
T ss_pred CeEEEeCCC-CCCcHHHHHHHHHHHHHHcCCCc--eEEecCC---ChhHHHHHH-HhhHhhc-CCCC-CC----------
Confidence 588898888 78999999999999999988655 4555432 111211101 0000010 0000 00
Q ss_pred CCchhhhHHHHhHHH-HHHHHHhccCCcEEEeCCCCccccceee-ecCCeEEEEeecCCcchHHHHhhhhcccccCchhh
Q 021684 116 YPRFTMIGQSFGSVY-LSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~-~~~~~l~~~~pdv~iss~~~a~~~p~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y 193 (309)
+.- ....+..... .+.+.+...+||+++.........+.++ ..+.|.+..+|++. .. +
T Consensus 62 -~~~-~~~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~-~~------------~----- 121 (372)
T cd03792 62 -SEE-EKEIYLEWNEENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDL-SS------------P----- 121 (372)
T ss_pred -CHH-HHHHHHHHHHHHhccccccCCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeec-CC------------C-----
Confidence 100 0000000000 0011133568998886654332333222 23788888899874 10 0
Q ss_pred hhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcc-c--C--------
Q 021684 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-L--P-------- 262 (309)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~-~--~-------- 262 (309)
. +. .+... .+..+++|.+++.|+ +.+.+.++ .+..||+|+||...... . +
T Consensus 122 ------~---~~-~~~~~----~~~~~~~d~~i~~~~---~~~~~~~~--~~~~vipngvd~~~~~~~~~~~~~~~~~~~ 182 (372)
T cd03792 122 ------N---RR-VWDFL----QPYIEDYDAAVFHLP---EYVPPQVP--PRKVIIPPSIDPLSGKNRELSPADIEYILE 182 (372)
T ss_pred ------c---HH-HHHHH----HHHHHhCCEEeecHH---HhcCCCCC--CceEEeCCCCCCCccccCCCCHHHHHHHHH
Confidence 0 00 11111 222356899998882 22333332 33349999999753210 0 0
Q ss_pred -CCCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 263 -LERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 263 -~~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.....++++++++||+.++||++.+|+| |+.+.++..+.++++||
T Consensus 183 ~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a--~~~l~~~~~~~~l~i~G 228 (372)
T cd03792 183 KYGIDPERPYITQVSRFDPWKDPFGVIDA--YRKVKERVPDPQLVLVG 228 (372)
T ss_pred HhCCCCCCcEEEEEeccccccCcHHHHHH--HHHHHhhCCCCEEEEEe
Confidence 0011235799999999999999999999 99997765667888887
No 37
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.30 E-value=6.5e-11 Score=109.81 Aligned_cols=242 Identities=13% Similarity=0.082 Sum_probs=131.9
Q ss_pred EEEEEcCCC-CCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 36 SVAFFHPNT-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 36 rIa~~hp~l-~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
||.|+-+.+ ...||+++.+.+++++|++.| +++.+++........ . ....+.....+.+++..+.......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~-- 72 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSG-K---IYKGYKREEVDGVRVHRVPLPPYKK-- 72 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCC--ceEEEEecCCCcccc-c---ccccceEEecCCeEEEEEecCCCCc--
Confidence 466666655 234899999999999999887 555666654311110 0 0000000111222333221111100
Q ss_pred cCCchhhhHHHHhHHHHHHHHH--hccCCcEEEeCCC-Ccccccee---eecCCeEEEEeecCCcchHHHHhhhhccccc
Q 021684 115 TYPRFTMIGQSFGSVYLSWEAL--CKFTPLYYFDTSG-YAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l--~~~~pdv~iss~~-~a~~~p~a---~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~ 188 (309)
...+..+...+.........+ +..+||+++.... .....+.. +..+.|.+..+|... .......
T Consensus 73 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-~~~~~~~-------- 142 (394)
T cd03794 73 -NGLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLW-PESAVAL-------- 142 (394)
T ss_pred -cchHHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhc-chhHHHc--------
Confidence 000011111111111122223 3678997776642 11112211 123688899899753 1111000
Q ss_pred CchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC----
Q 021684 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL---- 263 (309)
Q Consensus 189 ~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~---- 263 (309)
.. . ........+...+.+...+.+|.+++.|+..++.+. .++. ..++.|++|+++.+.+.....
T Consensus 143 ------~~---~-~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 211 (394)
T cd03794 143 ------GL---L-KNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADESL 211 (394)
T ss_pred ------cC---c-cccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhhh
Confidence 00 0 000111133334456667899999999999999998 4444 678999999998766642210
Q ss_pred ---CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 ---ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 ---~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
....+...++++||+.++|+++.+++| ++.+.++ .+-++.++|
T Consensus 212 ~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~--~~~l~~~-~~~~l~i~G 257 (394)
T cd03794 212 RKELGLDDKFVVLYAGNIGRAQGLDTLLEA--AALLKDR-PDIRFLIVG 257 (394)
T ss_pred hhccCCCCcEEEEEecCcccccCHHHHHHH--HHHHhhc-CCeEEEEeC
Confidence 112235689999999999999999999 9998766 555777765
No 38
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.28 E-value=6.4e-11 Score=115.99 Aligned_cols=227 Identities=14% Similarity=0.052 Sum_probs=118.1
Q ss_pred CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhhhHHHH
Q 021684 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (309)
Q Consensus 47 gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~~l 126 (309)
.||+|+.+.+++++|.++|.-+++.++|...+.. .........+ .+..++++++-+..+ +..+.....++.++
T Consensus 25 ~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~--~~~~~~~~~~-~~~~~gv~v~r~~~~----~~~~~~~~~~~~~~ 97 (439)
T TIGR02472 25 TGGQTKYVLELARALARRSEVEQVDLVTRLIKDA--KVSPDYAQPI-ERIAPGARIVRLPFG----PRRYLRKELLWPYL 97 (439)
T ss_pred CCCcchHHHHHHHHHHhCCCCcEEEEEeccccCc--CCCCccCCCe-eEeCCCcEEEEecCC----CCCCcChhhhhhhH
Confidence 4899999999999999987423677888543110 0000000000 012233333333211 00111111122222
Q ss_pred hHH-HHHHHHHhcc--CCcEEEeCCCCccccce--eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhh
Q 021684 127 GSV-YLSWEALCKF--TPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (309)
Q Consensus 127 ~~~-~~~~~~l~~~--~pdv~iss~~~a~~~p~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~ 201 (309)
..+ ....+.+++. +||+++.....+..... ++..+.|.+...|....+. .+..... .+. ..
T Consensus 98 ~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~~--~~~~~~~--~~~----------~~ 163 (439)
T TIGR02472 98 DELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREK--RRRLLAA--GLK----------PQ 163 (439)
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccchh--hhhcccC--CCC----------hh
Confidence 211 1223344432 69999976533222221 2245788888899643100 0000000 000 00
Q ss_pred HhHHHHHHHHH-HHHHHhcCCCcEEEEcCHHHHHHHH-HHhCC-CCCceEecCCCCCCCCcccCCC--------------
Q 021684 202 QCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQSHIE-KLWGI-PDRIKRVYPPCDTSGLQVLPLE-------------- 264 (309)
Q Consensus 202 ~~k~~y~~~~~-~~~~~~~~~ad~vIaNS~~t~~~i~-~~~~~-~~~~~VIYPPVd~~~~~~~~~~-------------- 264 (309)
.....|...-. ...+++++.+|.||++|+...++.. +..+. ++++.||||.||++.|......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~ 243 (439)
T TIGR02472 164 QIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL 243 (439)
T ss_pred hhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhc
Confidence 11111211100 1245667899999999976544433 33344 6789999999999887531100
Q ss_pred CCCCCcEEEEEcCCccccChhhhhccchhHhh
Q 021684 265 RSTEYPAIISVAQFRPEKVRYKLISTSCLEEI 296 (309)
Q Consensus 265 ~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l 296 (309)
....+.+++++||+.|+|+++.+|+| |+.+
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~li~A--~~~l 273 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPSLVEA--YGRS 273 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHHHHHH--HHhC
Confidence 01135689999999999999999999 9864
No 39
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.28 E-value=3.2e-11 Score=111.82 Aligned_cols=223 Identities=18% Similarity=0.132 Sum_probs=126.8
Q ss_pred EEEEEcCCCCCC-ChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 36 rIa~~hp~l~~g-GGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
||+++.+..... ||+|+.+.+++++|.+.| +++.+++.... .. ...... ...+. ......
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~--~~--~~~~~~--~~~~~----~~~~~~------- 61 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPF--RE--SEGPAR--VVPVP----SVPLPG------- 61 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCC--CEEEEEeCCch--hh--ccCCCC--ceeec----ccccCc-------
Confidence 577777655343 999999999999999987 55677775431 10 000000 00000 000000
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-e--eeecCCeEEEEeecCCcchHHHHhhhhcccccCch
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~ 191 (309)
+...... +.......+.+++.+||+++.......... . ++..+.|.+...|... . .+... +
T Consensus 62 -~~~~~~~---~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~----~~~~~----~--- 125 (364)
T cd03814 62 -YPEIRLA---LPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDF-P----EYLRY----Y--- 125 (364)
T ss_pred -ccceEec---ccchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecCh-H----HHhhh----c---
Confidence 0000000 001112233456778997765433221111 1 1235678888888653 1 10000 0
Q ss_pred hhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCC------
Q 021684 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER------ 265 (309)
Q Consensus 192 ~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~------ 265 (309)
...... .....+.++..+.+|.+++.|++.++.+.+... .++.|++|++|.+.+.......
T Consensus 126 -------~~~~~~----~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 192 (364)
T cd03814 126 -------GLGPLS----WLAWAYLRWFHNRADRVLVPSPSLADELRARGF--RRVRLWPRGVDTELFHPRRRDEALRARL 192 (364)
T ss_pred -------ccchHh----HhhHHHHHHHHHhCCEEEeCCHHHHHHHhccCC--CceeecCCCccccccCcccccHHHHHHh
Confidence 000111 111233445567899999999999997666543 7889999999987664211000
Q ss_pred -CCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 266 -STEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 266 -~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..+...++++||+.++|+++.+++| ++.+.++ .+-++.+||
T Consensus 193 ~~~~~~~i~~~G~~~~~k~~~~~i~~--~~~l~~~-~~~~l~i~G 234 (364)
T cd03814 193 GPPDRPVLLYVGRLAPEKNLEALLDA--DLPLRRR-PPVRLVIVG 234 (364)
T ss_pred CCCCCeEEEEEeccccccCHHHHHHH--HHHhhhc-CCceEEEEe
Confidence 1225689999999999999999999 9999776 556777776
No 40
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.27 E-value=1.6e-10 Score=106.30 Aligned_cols=226 Identities=15% Similarity=0.086 Sum_probs=128.8
Q ss_pred EEEcCCCCC--CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684 38 AFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (309)
Q Consensus 38 a~~hp~l~~--gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~ 115 (309)
.|+.+.... .||+++++.+++++|.+.| +++.+++...+... ..... . ..+.............. .
T Consensus 2 Lii~~~~p~~~~~g~~~~~~~~~~~l~~~g--~~v~v~~~~~~~~~--~~~~~----~-~~~~~~~~~~~~~~~~~---~ 69 (377)
T cd03798 2 LVISSLYPPPNNGGGGIFVKELARALAKRG--VEVTVLAPGPWGPK--LLDLL----K-GRLVGVERLPVLLPVVP---L 69 (377)
T ss_pred eEeccCCCCCCCchHHHHHHHHHHHHHHCC--CceEEEecCCCCCC--chhhc----c-cccccccccccCcchhh---c
Confidence 345554434 6899999999999999887 44567765431111 00000 0 00000000000000000 0
Q ss_pred CCchhhhHHHHhHHHHHHHHHh--ccCCcEEEeCCCCcccccee---eecCCeEEEEeecCCcchHHHHhhhhcccccCc
Q 021684 116 YPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (309)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~--~~~pdv~iss~~~a~~~p~a---~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~ 190 (309)
.......+. ......+.++ ..+||+++............ +..+.|.+.++|.+.... +.
T Consensus 70 ~~~~~~~~~---~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------~~- 133 (377)
T cd03798 70 LKGPLLYLL---AARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNL------------LP- 133 (377)
T ss_pred cccchhHHH---HHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcc------------cC-
Confidence 001111111 1122234455 77899777653322111111 123568899999874100 00
Q ss_pred hhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC------C
Q 021684 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------E 264 (309)
Q Consensus 191 ~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~------~ 264 (309)
... ......+...+.+|.+++.|++.++.+.+.+....++.|++|++|.+.+..... .
T Consensus 134 --------~~~--------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T cd03798 134 --------RKR--------LLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLG 197 (377)
T ss_pred --------chh--------hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHHHhcc
Confidence 000 112223445588999999999999999998422589999999999877753211 1
Q ss_pred CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 265 RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 265 ~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
...+...++++||+.+.|+++.+++| ++.+.++..+-++.+||
T Consensus 198 ~~~~~~~i~~~g~~~~~k~~~~li~~--~~~~~~~~~~~~l~i~g 240 (377)
T cd03798 198 LPEDKKVILFVGRLVPRKGIDYLIEA--LARLLKKRPDVHLVIVG 240 (377)
T ss_pred CCCCceEEEEeccCccccCHHHHHHH--HHHHHhcCCCeEEEEEc
Confidence 12245789999999999999999999 99987765556777665
No 41
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.27 E-value=1.3e-11 Score=120.55 Aligned_cols=234 Identities=20% Similarity=0.249 Sum_probs=145.7
Q ss_pred CCCcEEEEEcCCCCCCChHhHHHHHHHHHHHH---------hCCCCeEEEEeccCCCChh----hHHHHHhhhcCcccCC
Q 021684 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQE---------ESPDLDCIVYTGDHDAFPD----SLLARAVDRFGVELLH 98 (309)
Q Consensus 32 ~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~---------~~~~~~~~i~T~~~~~~~~----~~~~~~~~~~~~~l~~ 98 (309)
.+.+.+++.||++ .+||+||..++.+.+++. .| ..++++|.+.+..-. .++.... +...
T Consensus 32 ~~~~~~~~~~~~~-~~gg~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~al~~~~~~~~~~~~l-----~~~~ 103 (495)
T KOG0853|consen 32 KPFEHVTFIHPDL-GIGGAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHEDALEMPLLLRCFAETL-----DGTP 103 (495)
T ss_pred ccchhheeecccc-ccCchHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhhhhcchHHHHHHHHHh-----cCCC
Confidence 4455799999999 788999999999999998 77 455777766432100 1222111 1112
Q ss_pred CCeEEEccccceeeccc--CCchhhhHHHHhHHHHHHHHHhc--cCCcEEE-eCCCCccccceee-ec----CCeEEEEe
Q 021684 99 PPKVVHLYRRKWIEEST--YPRFTMIGQSFGSVYLSWEALCK--FTPLYYF-DTSGYAFTYPLAR-IF----GCRVICYT 168 (309)
Q Consensus 99 ~~~~v~l~~~~~~~~~~--~~~~~l~~~~l~~~~~~~~~l~~--~~pdv~i-ss~~~a~~~p~a~-~~----~~~~i~Y~ 168 (309)
++.++ +.|+++.. +......++....+...+..+.+ .+.|+++ ++. ....++.. +. ...+..||
T Consensus 104 ~i~vv----~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~--~~~~~l~~~~~~p~~~~~i~~~~ 177 (495)
T KOG0853|consen 104 PILVV----GDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFV--SACVPLLKQLSGPDVIIKIYFYC 177 (495)
T ss_pred ceEEE----EeecCcccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchH--HHHHHHHHHhcCCcccceeEEec
Confidence 22222 33444333 11222222222111111111111 3467444 333 23445432 33 36789999
Q ss_pred ecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC--CCCc
Q 021684 169 HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRI 246 (309)
Q Consensus 169 H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~--~~~~ 246 (309)
|+|. +.+ .+ -.+..+.+|...+.+........+|.+++||.+|+.+++..+.- ..++
T Consensus 178 h~~~------~ll-------a~--------r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~ 236 (495)
T KOG0853|consen 178 HFPD------SLL-------AK--------RLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDI 236 (495)
T ss_pred cchH------HHh-------cc--------ccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCc
Confidence 9995 111 10 02345678888888888888889999999999999999999874 4569
Q ss_pred eEecCCCCCCCCcc------c----CCC--C--CCCCcEEEEEcCCccccChhhhhccchhHhhhcccCC
Q 021684 247 KRVYPPCDTSGLQV------L----PLE--R--STEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLAS 302 (309)
Q Consensus 247 ~VIYPPVd~~~~~~------~----~~~--~--~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~ 302 (309)
.+.||+||.+.+.. . +.. . ...+-++++++|++|.||++++++| |.++.....+
T Consensus 237 ~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a--~~~~~~~i~~ 304 (495)
T KOG0853|consen 237 TSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPA--FTLLHDSIPE 304 (495)
T ss_pred ceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhh--HHhhhcccCC
Confidence 99999999776541 0 110 0 1225688899999999999999999 9999877643
No 42
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.26 E-value=6e-11 Score=117.14 Aligned_cols=253 Identities=13% Similarity=0.007 Sum_probs=132.9
Q ss_pred cEEEEEcCCC---CCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCc---------ccCCCCeE
Q 021684 35 TSVAFFHPNT---NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGV---------ELLHPPKV 102 (309)
Q Consensus 35 ~rIa~~hp~l---~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~---------~l~~~~~~ 102 (309)
|||+++-..+ ..-||.+.++-+|+++|++.| +++.|+|..++.-.... ......... ...+++++
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gv~v 77 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPAIREKL-RDAQVVGRLDLFTVLFGHLEGDGVPV 77 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcchhhhh-cCceEEEEeeeEEEEEEeEEcCCceE
Confidence 5677665431 146899999999999999987 56678887652110000 000000000 01122333
Q ss_pred EEccccceee-cccCCchhhh--HHHHhHHHHHHHHHh--ccCCcEEEeCCCCccccce-ee-e-----cCCeEEEEeec
Q 021684 103 VHLYRRKWIE-ESTYPRFTMI--GQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYPL-AR-I-----FGCRVICYTHY 170 (309)
Q Consensus 103 v~l~~~~~~~-~~~~~~~~l~--~~~l~~~~~~~~~l~--~~~pdv~iss~~~a~~~p~-a~-~-----~~~~~i~Y~H~ 170 (309)
+-+....... +..+....-. ...++ ..+.+.++ ..+||+++...+++..++. ++ . .+.|++.-+|+
T Consensus 78 ~~v~~~~~~~~~~~y~~~d~~~r~~~f~--~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~ 155 (466)
T PRK00654 78 YLIDAPHLFDRPSGYGYPDNGERFAFFS--WAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHN 155 (466)
T ss_pred EEEeCHHHcCCCCCCCCcChHHHHHHHH--HHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCC
Confidence 3221111111 1111110000 00111 11122233 2489999987665544442 22 1 25788888998
Q ss_pred CCcc----hHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHH-h-----
Q 021684 171 PTIS----LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-W----- 240 (309)
Q Consensus 171 P~~s----~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~-~----- 240 (309)
.... .+.+.... .+ .++.. ...+ ..+. ...+.+.+...||.|+|+|+..++++.+. +
T Consensus 156 ~~~~g~~~~~~~~~~~-----~~-~~~~~----~~~~-~~~~--~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~ 222 (466)
T PRK00654 156 LAYQGLFPAEILGELG-----LP-AEAFH----LEGL-EFYG--QISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLE 222 (466)
T ss_pred CcCCCcCCHHHHHHcC-----CC-hHHcC----chhh-hcCC--cccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChH
Confidence 7411 00000000 00 00000 0000 0000 00123345578999999999999999762 2
Q ss_pred ---CC-CCCceEecCCCCCCCCcccCC--------------------------C-CCCCCcEEEEEcCCccccChhhhhc
Q 021684 241 ---GI-PDRIKRVYPPCDTSGLQVLPL--------------------------E-RSTEYPAIISVAQFRPEKVRYKLIS 289 (309)
Q Consensus 241 ---~~-~~~~~VIYPPVd~~~~~~~~~--------------------------~-~~~~~~~iLsVGRl~p~Kn~~~lI~ 289 (309)
+. +.++.||+|.||++.+..... . .+.+.+.++++|||.++|+++++|+
T Consensus 223 ~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~ 302 (466)
T PRK00654 223 GLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLE 302 (466)
T ss_pred HHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHH
Confidence 22 468999999999987642100 0 0113568999999999999999999
Q ss_pred cchhHhhhcccCCCCCccCC
Q 021684 290 TSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 290 A~~f~~l~~~~~~~~~~~~~ 309 (309)
| |+++.++ +.++++.|
T Consensus 303 a--~~~l~~~--~~~lvivG 318 (466)
T PRK00654 303 A--LPELLEQ--GGQLVLLG 318 (466)
T ss_pred H--HHHHHhc--CCEEEEEe
Confidence 9 9998654 56777665
No 43
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.26 E-value=1.8e-10 Score=106.59 Aligned_cols=228 Identities=12% Similarity=0.086 Sum_probs=129.6
Q ss_pred EEEEEcCC-CCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 36 SVAFFHPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 36 rIa~~hp~-l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
||.++.+. ....||+++.+.+++++|.+.| +++.++|........ . . ... ... .... ...
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~---~--~-~~~-~~~----~~~~------~~~ 61 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPE---E--E-EVV-VVR----PFRV------PTF 61 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCc---c--c-ccc-ccc----cccc------ccc
Confidence 46666654 4567899999999999999987 555677654311100 0 0 000 000 0000 000
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce---eeecCCeEEEEeecCCcchHHHHhhhhcccccCch
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~---a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~ 191 (309)
.+......+. ......+.++..+||+++........... ++..+.|++...|.+. . +.....
T Consensus 62 ~~~~~~~~~~---~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~---------- 126 (374)
T cd03817 62 KYPDFRLPLP---IPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMY-E-DYTHYV---------- 126 (374)
T ss_pred hhhhhhcccc---HHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCH-H-HHHHHH----------
Confidence 0011111111 11112233567889988765442211111 1234678888888764 1 111100
Q ss_pred hhhhhcchhhHhHHHHHHHHH-HHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC-------
Q 021684 192 ASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------- 263 (309)
Q Consensus 192 ~y~~~~~~~~~~k~~y~~~~~-~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~------- 263 (309)
. ..+........ .+.+...+.+|.++++|+..++.+.+... ..++.|++|+++.+.+...+.
T Consensus 127 ---~------~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd03817 127 ---P------LGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREYGV-KRPIEVIPTGIDLDRFEPVDGDDERRKL 196 (374)
T ss_pred ---h------cccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhcCC-CCceEEcCCccchhccCccchhHHHHhc
Confidence 0 00000101111 33556668899999999999999987643 456899999999877753211
Q ss_pred CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 ~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
....++..++++||+.++|+++.+++| ++.+.++..+-++.++|
T Consensus 197 ~~~~~~~~i~~~G~~~~~k~~~~l~~~--~~~~~~~~~~~~l~i~G 240 (374)
T cd03817 197 GIPEDEPVLLYVGRLAKEKNIDFLIRA--FARLLKEEPDVKLVIVG 240 (374)
T ss_pred CCCCCCeEEEEEeeeecccCHHHHHHH--HHHHHHhCCCeEEEEEe
Confidence 112235789999999999999999999 99987765555666665
No 44
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.24 E-value=2.2e-10 Score=111.39 Aligned_cols=223 Identities=10% Similarity=0.037 Sum_probs=118.7
Q ss_pred CcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeec
Q 021684 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (309)
Q Consensus 34 ~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~ 113 (309)
++||.++-.. .+|++.|+ .+++++|++.| +++.|++.... .+. .+. ....+++++.+.....
T Consensus 3 ~~~~~~~~~~--~~~~~~R~-~~~a~~L~~~G--~~V~ii~~~~~-~~~---~~~------~~~~~v~~~~~~~~~~--- 64 (415)
T cd03816 3 RKRVCVLVLG--DIGRSPRM-QYHALSLAKHG--WKVDLVGYLET-PPH---DEI------LSNPNITIHPLPPPPQ--- 64 (415)
T ss_pred ccEEEEEEec--ccCCCHHH-HHHHHHHHhcC--ceEEEEEecCC-CCC---HHH------hcCCCEEEEECCCCcc---
Confidence 3466665542 34444555 77999999987 55567765431 110 110 1122334444432110
Q ss_pred ccCCchhhhHH---HHhHHHHHHH-HHhccCCcEEEeCCCCcccc---ce--eeecCCeEEEEeecCCcchHHHHhhhhc
Q 021684 114 STYPRFTMIGQ---SFGSVYLSWE-ALCKFTPLYYFDTSGYAFTY---PL--ARIFGCRVICYTHYPTISLDMISRVREG 184 (309)
Q Consensus 114 ~~~~~~~l~~~---~l~~~~~~~~-~l~~~~pdv~iss~~~a~~~---p~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~ 184 (309)
.......++.. .+.......+ .++..+||+++.+.+..... +. ++..+.|.+..+|.-..+ ... .
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~--~~~-~--- 138 (415)
T cd03816 65 RLNKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYT--ILA-L--- 138 (415)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHH--HHh-c---
Confidence 00000111111 1111111122 23456899888654322211 11 124578888888863200 000 0
Q ss_pred ccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC
Q 021684 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL 263 (309)
Q Consensus 185 ~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~ 263 (309)
.+. . .+.+ .+++.++.++..+.+|.||++|+.+++.+.+ ++. ++++.||||.+ .+.|...+.
T Consensus 139 --~~~------~---~~~~----~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~-~~~f~p~~~ 201 (415)
T cd03816 139 --KLG------E---NHPL----VRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRP-PEQFRPLPL 201 (415)
T ss_pred --ccC------C---CCHH----HHHHHHHHHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCC-HHHceeCcH
Confidence 000 0 0111 1233344556668899999999999999988 665 78999999963 233321000
Q ss_pred -------------------------CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcc
Q 021684 264 -------------------------ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCR 299 (309)
Q Consensus 264 -------------------------~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~ 299 (309)
....+..+++++||+.++|+++.+|+| ++.+++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A--~~~l~~~ 260 (415)
T cd03816 202 EEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDA--LVAYEKS 260 (415)
T ss_pred HHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHH--HHHHHHh
Confidence 001123567899999999999999999 9998753
No 45
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.18 E-value=3.4e-10 Score=109.92 Aligned_cols=90 Identities=20% Similarity=0.206 Sum_probs=69.8
Q ss_pred HhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccccChhhhhccchhHh
Q 021684 217 LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEE 295 (309)
Q Consensus 217 ~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~ 295 (309)
...+++|.|+++|++.++.+.+. |. ++++.||||++|.+.|...+.....++..++++||+.++|+++.+|+| ++.
T Consensus 170 ~~~~~ad~vv~~S~~~~~~l~~~-g~~~~ki~vi~nGvd~~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll~a--~~~ 246 (406)
T PRK15427 170 QLFRRGDLMLPISDLWAGRLQKM-GCPPEKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEA--CRQ 246 (406)
T ss_pred HHHHhCCEEEECCHHHHHHHHHc-CCCHHHEEEcCCCCCHHHcCCCccccCCCCeEEEEEeCcchhcCHHHHHHH--HHH
Confidence 34478999999999999999875 65 568899999999988853211111123469999999999999999999 999
Q ss_pred hhcccCCCCCccCC
Q 021684 296 IRCRLASAQTPICG 309 (309)
Q Consensus 296 l~~~~~~~~~~~~~ 309 (309)
+.++..+-++.++|
T Consensus 247 l~~~~~~~~l~ivG 260 (406)
T PRK15427 247 LKEQGVAFRYRILG 260 (406)
T ss_pred HHhhCCCEEEEEEE
Confidence 97765555666665
No 46
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.15 E-value=3.3e-10 Score=108.97 Aligned_cols=86 Identities=15% Similarity=0.143 Sum_probs=67.7
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC-------CCCCCCcEEEEEcCCccccChhhhhccchh
Q 021684 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------ERSTEYPAIISVAQFRPEKVRYKLISTSCL 293 (309)
Q Consensus 221 ~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~-------~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f 293 (309)
++|.+|++|+++++.+.+.++ ..++.||||++|.+.+..... ....++..++++||+.++|+++.+|+| |
T Consensus 139 ~~~~ii~~S~~~~~~~~~~~~-~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A--~ 215 (380)
T PRK15484 139 KNAKIIVPSQFLKKFYEERLP-NADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA--F 215 (380)
T ss_pred cCCEEEEcCHHHHHHHHhhCC-CCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH--H
Confidence 579999999999999998775 568999999999877752110 011135789999999999999999999 9
Q ss_pred HhhhcccCCCCCccCC
Q 021684 294 EEIRCRLASAQTPICG 309 (309)
Q Consensus 294 ~~l~~~~~~~~~~~~~ 309 (309)
+.+.++..+.++++.|
T Consensus 216 ~~l~~~~p~~~lvivG 231 (380)
T PRK15484 216 EKLATAHSNLKLVVVG 231 (380)
T ss_pred HHHHHhCCCeEEEEEe
Confidence 9998776666666654
No 47
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.15 E-value=8.6e-10 Score=109.83 Aligned_cols=145 Identities=18% Similarity=0.109 Sum_probs=95.8
Q ss_pred HHHhccCCcEEEeCCCCccccc-e-eeecCCeEEEE-eec-CCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHH
Q 021684 134 EALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICY-THY-PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT 209 (309)
Q Consensus 134 ~~l~~~~pdv~iss~~~a~~~p-~-a~~~~~~~i~Y-~H~-P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~ 209 (309)
..++..+||+++.....++... + +++.+.|++.- .|. +. .+ . .....+-|
T Consensus 274 ~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~--~~--~--------------------~r~~~~e~-- 327 (578)
T PRK15490 274 PHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPP--VV--R--------------------KRLFKPEY-- 327 (578)
T ss_pred HHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCC--cc--h--------------------hhHHHHHH--
Confidence 4467889999998776554444 2 34668888643 552 21 00 0 00011111
Q ss_pred HHHHHHH--HhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC---------C--CCCCCcEEEEE
Q 021684 210 FFSWMYG--LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL---------E--RSTEYPAIISV 275 (309)
Q Consensus 210 ~~~~~~~--~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~---------~--~~~~~~~iLsV 275 (309)
...++ ...+.+| +++||..+++.+.+.++. ++++.||||+||++.|..... . ....+.++.++
T Consensus 328 --~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~V 404 (578)
T PRK15490 328 --EPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGV 404 (578)
T ss_pred --HHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEE
Confidence 01122 2245677 889999999999999987 788999999999887753110 0 01224578899
Q ss_pred cCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 276 AQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 276 GRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
|||.++|+++.+|+| |+.+.++..+.++.+.|
T Consensus 405 gRl~~~Kg~~~LI~A--~a~llk~~pdirLvIVG 436 (578)
T PRK15490 405 FRFVGDKNPFAWIDF--AARYLQHHPATRFVLVG 436 (578)
T ss_pred EEEehhcCHHHHHHH--HHHHHhHCCCeEEEEEe
Confidence 999999999999999 99886665566666665
No 48
>PLN02316 synthase/transferase
Probab=99.13 E-value=2.2e-09 Score=113.49 Aligned_cols=229 Identities=14% Similarity=0.105 Sum_probs=133.9
Q ss_pred CCCcEEEEEcCCCC---CCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHh--hhcCc---------ccC
Q 021684 32 NRTTSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV--DRFGV---------ELL 97 (309)
Q Consensus 32 ~~~~rIa~~hp~l~---~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~--~~~~~---------~l~ 97 (309)
.++|+|+++-..+. .-||-.-|+..|+++|++.| +++.|+|..++.-.......+. ..+.. ...
T Consensus 585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 662 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKV 662 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEE
Confidence 35589998875432 36899999999999999988 5667888766321000000010 00000 000
Q ss_pred CCCeEEEcccc--ceeecccCC------chhhhHHHHhHHHHHHHHHh--ccCCcEEEeCCCCccccce-ee-------e
Q 021684 98 HPPKVVHLYRR--KWIEESTYP------RFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYPL-AR-------I 159 (309)
Q Consensus 98 ~~~~~v~l~~~--~~~~~~~~~------~~~l~~~~l~~~~~~~~~l~--~~~pdv~iss~~~a~~~p~-a~-------~ 159 (309)
+++.+.-+... .+-....|. +|..++++ +.+.++ ..+||+++...++...+|. ++ +
T Consensus 663 ~GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~A------ale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~ 736 (1036)
T PLN02316 663 EGLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHA------ALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGL 736 (1036)
T ss_pred CCcEEEEEeccccccCCCCCCCchhHHHHHHHHHHH------HHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhcc
Confidence 12222211110 000000111 12222221 122232 2579999988665544443 21 1
Q ss_pred cCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHH
Q 021684 160 FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL 239 (309)
Q Consensus 160 ~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~ 239 (309)
.+.|+|.-+|+.. |. ...++ .+...+|.|+|+|+..++.|...
T Consensus 737 ~~~p~V~TiHnl~---------------~~----------~n~lk------------~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 737 SKARVVFTIHNLE---------------FG----------ANHIG------------KAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred CCCCEEEEeCCcc---------------cc----------hhHHH------------HHHHHCCEEEeCCHHHHHHHHhc
Confidence 3467888899864 10 00111 22356999999999999999987
Q ss_pred hCC---CCCceEecCCCCCCCCccc-----CCC-----------------------CCCCCcEEEEEcCCccccChhhhh
Q 021684 240 WGI---PDRIKRVYPPCDTSGLQVL-----PLE-----------------------RSTEYPAIISVAQFRPEKVRYKLI 288 (309)
Q Consensus 240 ~~~---~~~~~VIYPPVd~~~~~~~-----~~~-----------------------~~~~~~~iLsVGRl~p~Kn~~~lI 288 (309)
+.+ ..++.||+|.||++.+... +.. .....+.+++||||.++|++++++
T Consensus 780 ~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi 859 (1036)
T PLN02316 780 SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIK 859 (1036)
T ss_pred cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHH
Confidence 654 3689999999998865310 000 001246899999999999999999
Q ss_pred ccchhHhhhcccCCCCCccCC
Q 021684 289 STSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 289 ~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+| +..+.++ +.|++++|
T Consensus 860 ~A--l~~ll~~--~~qlVIvG 876 (1036)
T PLN02316 860 HA--IWRTLER--NGQVVLLG 876 (1036)
T ss_pred HH--HHHHhhc--CcEEEEEe
Confidence 99 9887543 57888876
No 49
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.13 E-value=5.7e-10 Score=109.86 Aligned_cols=91 Identities=15% Similarity=-0.007 Sum_probs=67.3
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHH---------hCC-CCCceEecCCCCCCCCcccCCC--------------------
Q 021684 215 YGLVGSCADLAMVNSSWTQSHIEKL---------WGI-PDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (309)
Q Consensus 215 ~~~~~~~ad~vIaNS~~t~~~i~~~---------~~~-~~~~~VIYPPVd~~~~~~~~~~-------------------- 264 (309)
.+.+...+|.|+++|...++.+.+. ++. ..++.+|+|+||.+.+......
T Consensus 204 ~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~ 283 (476)
T cd03791 204 LKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAA 283 (476)
T ss_pred HHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHH
Confidence 3445578999999999999999752 221 4789999999998877521000
Q ss_pred --------CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 265 --------RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 265 --------~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.....+.++++||+.++|+++++++| ++.+.++. .++++.|
T Consensus 284 l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a--~~~l~~~~--~~lvi~G 332 (476)
T cd03791 284 LQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEA--LPELLELG--GQLVILG 332 (476)
T ss_pred HHHHcCCCcCCCCCEEEEEeeccccccHHHHHHH--HHHHHHcC--cEEEEEe
Confidence 01246789999999999999999999 99886542 5555544
No 50
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.13 E-value=8.7e-10 Score=108.88 Aligned_cols=90 Identities=17% Similarity=0.121 Sum_probs=67.9
Q ss_pred HHhcCCCcEEEEcCHHHHHHHHHH-hC--C-------CCCceEecCCCCCCCCcccC-----------------------
Q 021684 216 GLVGSCADLAMVNSSWTQSHIEKL-WG--I-------PDRIKRVYPPCDTSGLQVLP----------------------- 262 (309)
Q Consensus 216 ~~~~~~ad~vIaNS~~t~~~i~~~-~~--~-------~~~~~VIYPPVd~~~~~~~~----------------------- 262 (309)
+.+...||.|+++|+..++++.+. ++ + +.++.+|+|.||++.+....
T Consensus 200 k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l 279 (473)
T TIGR02095 200 KGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEAL 279 (473)
T ss_pred HHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHH
Confidence 445678999999999999999763 22 1 36899999999988775210
Q ss_pred -----CCCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 263 -----LERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 263 -----~~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.......+.++++||+.++|+++++|+| ++++.++ +.+++++|
T Consensus 280 ~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a--~~~l~~~--~~~lvi~G 327 (473)
T TIGR02095 280 QEELGLPVDDDVPLFGVISRLTQQKGVDLLLAA--LPELLEL--GGQLVVLG 327 (473)
T ss_pred HHHcCCCccCCCCEEEEEecCccccChHHHHHH--HHHHHHc--CcEEEEEC
Confidence 0001135789999999999999999999 9998654 36777766
No 51
>PLN02275 transferase, transferring glycosyl groups
Probab=99.10 E-value=6e-09 Score=99.81 Aligned_cols=83 Identities=18% Similarity=0.280 Sum_probs=61.5
Q ss_pred HHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCC---CCCCCcEEEEEcCCccccChhh
Q 021684 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---RSTEYPAIISVAQFRPEKVRYK 286 (309)
Q Consensus 210 ~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~---~~~~~~~iLsVGRl~p~Kn~~~ 286 (309)
++.++.++.++.+|.||++|+.+++.+.+.+| .++.||||++ .+.|...... ......+++++||+.++|+++.
T Consensus 154 ~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g--~~i~vi~n~~-~~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~~~ 230 (371)
T PLN02275 154 LYRWYERHYGKMADGHLCVTKAMQHELDQNWG--IRATVLYDQP-PEFFRPASLEIRLRPNRPALVVSSTSWTPDEDFGI 230 (371)
T ss_pred HHHHHHHHHHhhCCEEEECCHHHHHHHHHhcC--CCeEEECCCC-HHHcCcCCchhcccCCCcEEEEEeCceeccCCHHH
Confidence 33344556668899999999999999998887 4489999974 4555421111 1112347789999999999999
Q ss_pred hhccchhHhhh
Q 021684 287 LISTSCLEEIR 297 (309)
Q Consensus 287 lI~A~~f~~l~ 297 (309)
+++| ++.+.
T Consensus 231 li~a--~~~l~ 239 (371)
T PLN02275 231 LLEA--AVMYD 239 (371)
T ss_pred HHHH--HHHHH
Confidence 9999 99875
No 52
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.09 E-value=5.2e-09 Score=100.86 Aligned_cols=98 Identities=12% Similarity=-0.003 Sum_probs=74.2
Q ss_pred HHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCC---CCCCcEEEEEcCCccccChh
Q 021684 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER---STEYPAIISVAQFRPEKVRY 285 (309)
Q Consensus 210 ~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~---~~~~~~iLsVGRl~p~Kn~~ 285 (309)
.+..+.+...+++|.+++.|+.+++.+++.++. +.++.||+|+||++.|....... ....+.++++||+.++||++
T Consensus 161 ~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~~~~~~~~~ilf~G~l~~~k~~~ 240 (397)
T TIGR03087 161 LLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPNPYPPGKRVLVFTGAMDYWPNID 240 (397)
T ss_pred HHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccCCCCCCCcEEEEEEecCCccCHH
Confidence 344556677899999999999999999988754 56889999999998875321111 11246899999999999999
Q ss_pred hhh----ccchhHhhhcccCCCCCccCC
Q 021684 286 KLI----STSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 286 ~lI----~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.++ ++ +..+.++..+.++.|.|
T Consensus 241 ~l~~~~~~~--~~~l~~~~p~~~l~ivG 266 (397)
T TIGR03087 241 AVVWFAERV--FPAVRARRPAAEFYIVG 266 (397)
T ss_pred HHHHHHHHH--HHHHHHHCCCcEEEEEC
Confidence 988 56 66776665666777765
No 53
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.08 E-value=4.6e-09 Score=111.01 Aligned_cols=252 Identities=11% Similarity=0.048 Sum_probs=137.6
Q ss_pred hccCCCCcEEEEEcCCCC-------C-----CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChh---h---HHHHHh
Q 021684 28 NARRNRTTSVAFFHPNTN-------D-----GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPD---S---LLARAV 89 (309)
Q Consensus 28 ~~~~~~~~rIa~~hp~l~-------~-----gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~---~---~~~~~~ 89 (309)
+....+++.|+++...=. - -||--++++++|++|++.+--+++.|+|...+ +++ . -.+.+.
T Consensus 163 ~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~-~~~~~~~y~~p~e~~~ 241 (1050)
T TIGR02468 163 DQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS-SPDVDWSYGEPTEMLT 241 (1050)
T ss_pred hhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcC-ccccccccCCcccccc
Confidence 334456778888765311 1 37888999999999999752237789997542 110 0 000000
Q ss_pred h----hcCc--ccCCCCeEEEccccceeecccCCchhhhHHHHhHHHH-HHHHHhc--------------cCCcEEEeCC
Q 021684 90 D----RFGV--ELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYL-SWEALCK--------------FTPLYYFDTS 148 (309)
Q Consensus 90 ~----~~~~--~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~l~~--------------~~pdv~iss~ 148 (309)
. .+.. ...++++++.+..+ ++..+-.-..+|..+..+-- +.+.+.+ ..||+++...
T Consensus 242 ~~~~~~~~~~~~~~~g~rIvRip~G---P~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHy 318 (1050)
T TIGR02468 242 PRSSENDGDEMGESSGAYIIRIPFG---PRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHY 318 (1050)
T ss_pred ccccccccccccCCCCeEEEEeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECc
Confidence 0 0000 12234455544322 11011111224444432211 1111211 2499999876
Q ss_pred CCccccce--eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHH-HHHHHhcCCCcEE
Q 021684 149 GYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLA 225 (309)
Q Consensus 149 ~~a~~~p~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~-~~~~~~~~~ad~v 225 (309)
+.+..++. +...+.|.|.-.|+-- .+..+.+..+.. ...+ .....|....+ ...++++..||.|
T Consensus 319 w~sG~aa~~L~~~lgVP~V~T~HSLg--r~K~~~ll~~g~--~~~~---------~~~~~y~~~~Ri~~Ee~~l~~Ad~V 385 (1050)
T TIGR02468 319 ADAGDSAALLSGALNVPMVLTGHSLG--RDKLEQLLKQGR--MSKE---------EINSTYKIMRRIEAEELSLDASEIV 385 (1050)
T ss_pred chHHHHHHHHHHhhCCCEEEECccch--hhhhhhhccccc--cccc---------ccccccchHHHHHHHHHHHHhcCEE
Confidence 54433332 2356889888888742 111110000000 0000 00001110000 1356778899999
Q ss_pred EEcCHHHHHHHHHHhCC-----------------------CCCceEecCCCCCCCCcccCCC------------------
Q 021684 226 MVNSSWTQSHIEKLWGI-----------------------PDRIKRVYPPCDTSGLQVLPLE------------------ 264 (309)
Q Consensus 226 IaNS~~t~~~i~~~~~~-----------------------~~~~~VIYPPVd~~~~~~~~~~------------------ 264 (309)
||+|+.-++++.+.|+- ..++.||+|.||++.|......
T Consensus 386 IasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~ 465 (1050)
T TIGR02468 386 ITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPP 465 (1050)
T ss_pred EEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccch
Confidence 99999999998888751 1288999999999988631000
Q ss_pred ---------CCCCCcEEEEEcCCccccChhhhhccchhHhhhc
Q 021684 265 ---------RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRC 298 (309)
Q Consensus 265 ---------~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~ 298 (309)
.....+++|+|||+.|+||++.+|+| |+.+++
T Consensus 466 ~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeA--f~~L~~ 506 (1050)
T TIGR02468 466 IWSEIMRFFTNPRKPMILALARPDPKKNITTLVKA--FGECRP 506 (1050)
T ss_pred hhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHH--HHHhHh
Confidence 01234689999999999999999999 999864
No 54
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.06 E-value=2.9e-09 Score=99.50 Aligned_cols=88 Identities=16% Similarity=0.040 Sum_probs=64.6
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccC-------CCCCCCCcEEEEEcCCcc--ccChhhhhc
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPAIISVAQFRP--EKVRYKLIS 289 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~-------~~~~~~~~~iLsVGRl~p--~Kn~~~lI~ 289 (309)
..++.++++|+++++.+.+.++. ..++.|++||+|.+.+.... ...+.+...++..|+... +|+++.+++
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~ 213 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIE 213 (365)
T ss_pred cCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHH
Confidence 67889999999999999998754 57999999999988764210 011122345666667655 899999999
Q ss_pred cchhHhhhcc-cCCCCCccCC
Q 021684 290 TSCLEEIRCR-LASAQTPICG 309 (309)
Q Consensus 290 A~~f~~l~~~-~~~~~~~~~~ 309 (309)
| ++.+.++ ..+-+..+||
T Consensus 214 a--~~~l~~~~~~~~~~~i~G 232 (365)
T cd03825 214 A--LKRLAERWKDDIELVVFG 232 (365)
T ss_pred H--HHHhhhccCCCeEEEEeC
Confidence 9 9988765 3444666665
No 55
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.03 E-value=1.1e-08 Score=105.93 Aligned_cols=252 Identities=13% Similarity=0.071 Sum_probs=130.6
Q ss_pred cEEEEEcCCCC--C--------CChHhHHHHHHHHHH--------HHhCCCC--eEEEEeccCCCC-hhhHHHHHhhhcC
Q 021684 35 TSVAFFHPNTN--D--------GGGGERVLWCAVKAI--------QEESPDL--DCIVYTGDHDAF-PDSLLARAVDRFG 93 (309)
Q Consensus 35 ~rIa~~hp~l~--~--------gGGaErV~~~la~aL--------~~~~~~~--~~~i~T~~~~~~-~~~~~~~~~~~~~ 93 (309)
+||+++.+.-. . -||--.++.++|++| +++|.++ ++.|+|...+.. ...+-+.++.
T Consensus 256 ~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~--- 332 (784)
T TIGR02470 256 FNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEK--- 332 (784)
T ss_pred ceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccc---
Confidence 68988776541 1 378888999999986 4566432 567888653111 1001111110
Q ss_pred cccCCCCeEEEccccce---eecccCCchhhhHHHHhHHH-HHHHHHh---ccCCcEEEeCCCCccccce--eeecCCeE
Q 021684 94 VELLHPPKVVHLYRRKW---IEESTYPRFTMIGQSFGSVY-LSWEALC---KFTPLYYFDTSGYAFTYPL--ARIFGCRV 164 (309)
Q Consensus 94 ~~l~~~~~~v~l~~~~~---~~~~~~~~~~l~~~~l~~~~-~~~~~l~---~~~pdv~iss~~~a~~~p~--a~~~~~~~ 164 (309)
....+.++++.+..+.. ..+...++.. +|.++..+- .+.+.+. ..+||++++..+.++.++. ++..+.|.
T Consensus 333 ~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~-l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~ 411 (784)
T TIGR02470 333 VYGTEHAWILRVPFRTENGIILRNWISRFE-IWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQ 411 (784)
T ss_pred ccCCCceEEEEecCCCCcccccccccCHHH-HHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCE
Confidence 01112234433322221 0111112322 334443221 1222222 2469999987766555552 34567887
Q ss_pred EEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHH-HHHHHhcCCCcEEEEcCHHH----HHHHHH-
Q 021684 165 ICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWT----QSHIEK- 238 (309)
Q Consensus 165 i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~-~~~~~~~~~ad~vIaNS~~t----~~~i~~- 238 (309)
+.-.|+.. .. ++ +.....|. .....|..-.+ -....+...||.|||+|..- .+.+..
T Consensus 412 v~t~HsL~--~~--K~-~~~g~~~~------------~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY 474 (784)
T TIGR02470 412 CTIAHALE--KT--KY-PDSDIYWQ------------EFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQY 474 (784)
T ss_pred EEECCcch--hh--cc-cccccccc------------cchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhh
Confidence 77678753 10 10 00000010 00001100000 01335668899999999632 233331
Q ss_pred ----------HhCC-------CCCceEecCCCCCCCCcccCC--C--------------------------CCCCCcEEE
Q 021684 239 ----------LWGI-------PDRIKRVYPPCDTSGLQVLPL--E--------------------------RSTEYPAII 273 (309)
Q Consensus 239 ----------~~~~-------~~~~~VIYPPVd~~~~~~~~~--~--------------------------~~~~~~~iL 273 (309)
+|++ +.++.||+|.||++.|..... . .+...+.++
T Consensus 475 ~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl 554 (784)
T TIGR02470 475 ESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIF 554 (784)
T ss_pred hhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEE
Confidence 2221 357799999999887742100 0 012357899
Q ss_pred EEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 274 SVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 274 sVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+||||+|+||++.+|+| |+.+.+...+.+++|+|
T Consensus 555 ~VGRL~~~KGid~LIeA--~~~l~~l~~~~~LVIVG 588 (784)
T TIGR02470 555 SMARLDRVKNLTGLVEC--YGRSPKLRELVNLVVVA 588 (784)
T ss_pred EEeCCCccCCHHHHHHH--HHHhHhhCCCeEEEEEe
Confidence 99999999999999999 98775433345777765
No 56
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.01 E-value=7.5e-10 Score=91.09 Aligned_cols=155 Identities=21% Similarity=0.172 Sum_probs=74.9
Q ss_pred ChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhhhHHHHh
Q 021684 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (309)
Q Consensus 48 GGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~~l~ 127 (309)
||+|+++.+++++|.+.| +++.+++...+ .. . . . ....++++..+.... .. ..+..+ .
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~--~~-~-~------~-~~~~~~~~~~~~~~~----~~-~~~~~~----~ 58 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPD--PE-D-D------E-EEEDGVRVHRLPLPR----RP-WPLRLL----R 58 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE-----GG-G--------S-EEETTEEEEEE--S-----SS-SGGGHC----C
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCC--Cc-c-c------c-cccCCceEEeccCCc----cc-hhhhhH----H
Confidence 899999999999999998 56677775431 11 0 0 0 111222333221110 00 011111 1
Q ss_pred HHHHHHHHH--hccCCcEEEeCCCCccccc-eee-ecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHh
Q 021684 128 SVYLSWEAL--CKFTPLYYFDTSGYAFTYP-LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203 (309)
Q Consensus 128 ~~~~~~~~l--~~~~pdv~iss~~~a~~~p-~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 203 (309)
......+.+ +..+||+++.....+.... +++ ..+.|+++-+|...+.. ..++.
T Consensus 59 ~~~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-----------------------~~~~~ 115 (160)
T PF13579_consen 59 FLRRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR-----------------------GSRWK 115 (160)
T ss_dssp HHHHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T-----------------------------HH
T ss_pred HHHHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh-----------------------ccchh
Confidence 111222334 6788998886653211111 233 45889999999743100 01111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCC
Q 021684 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (309)
Q Consensus 204 k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPP 252 (309)
++++ ..+.++..+.||.++++|+.+++.+.+ +|. ++++.||||+
T Consensus 116 ~~~~----~~~~~~~~~~ad~vi~~S~~~~~~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 116 RRLY----RWLERRLLRRADRVIVVSEAMRRYLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HHHH----HHHHHHHHHH-SEEEESSHHHHHHHHH-H---GGGEEE----
T ss_pred hHHH----HHHHHHHHhcCCEEEECCHHHHHHHHH-hCCCCCcEEEeCcC
Confidence 2222 333556668899999999999999999 776 6799999985
No 57
>PRK14099 glycogen synthase; Provisional
Probab=99.01 E-value=6.4e-09 Score=103.41 Aligned_cols=156 Identities=14% Similarity=0.022 Sum_probs=93.9
Q ss_pred ccCCcEEEeCCCCccccce-ee---ecCCeEEEEeecCCcchHHHHhhhhcccccCch--hhhhhcc-hhhHhHHHHHHH
Q 021684 138 KFTPLYYFDTSGYAFTYPL-AR---IFGCRVICYTHYPTISLDMISRVREGSSMYNNN--ASIAQSN-WLSQCKIVYYTF 210 (309)
Q Consensus 138 ~~~pdv~iss~~~a~~~p~-a~---~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~--~y~~~~~-~~~~~k~~y~~~ 210 (309)
..+||++++..+++..+|. .+ ..+.|.|.-+|+....-. ++.. ++.+..+ ....-...++.-
T Consensus 131 ~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (485)
T PRK14099 131 GFVPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQ-----------FPRELLGALGLPPSAFSLDGVEYYGG 199 (485)
T ss_pred CCCCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCc-----------CCHHHHHHcCCChHHcCchhhhhCCC
Confidence 4689999988777766663 22 134678888998641100 0000 0000000 000000000000
Q ss_pred HHHHHHHhcCCCcEEEEcCHHHHHHHHHHhC---------C-CCCceEecCCCCCCCCcccCC-----------------
Q 021684 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWG---------I-PDRIKRVYPPCDTSGLQVLPL----------------- 263 (309)
Q Consensus 211 ~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~---------~-~~~~~VIYPPVd~~~~~~~~~----------------- 263 (309)
. .+.+.+..+||.|+|+|+.+++++.+.++ . .+++.||+|.||++.+.....
T Consensus 200 ~-~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 200 I-GYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred c-cHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 0 12345567899999999999999987431 1 468999999999887742100
Q ss_pred -----------CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 -----------ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 -----------~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..+...+++++||||.++|+++++|+| ++.+.++ +.++++.|
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A--~~~l~~~--~~~lvivG 331 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEA--LPTLLGE--GAQLALLG 331 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHH--HHHHHhc--CcEEEEEe
Confidence 001123578899999999999999999 9988643 45666654
No 58
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.99 E-value=5e-09 Score=99.26 Aligned_cols=212 Identities=10% Similarity=0.041 Sum_probs=117.5
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
|||.|+-- ..||+|+++.+++++|++.| +++.+++... +. ..+.++. .++++..+.........
T Consensus 2 ~~i~i~~~---g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~--~~--~~~~~~~-------~g~~~~~~~~~~~~~~~ 65 (357)
T PRK00726 2 KKILLAGG---GTGGHVFPALALAEELKKRG--WEVLYLGTAR--GM--EARLVPK-------AGIEFHFIPSGGLRRKG 65 (357)
T ss_pred cEEEEEcC---cchHhhhHHHHHHHHHHhCC--CEEEEEECCC--ch--hhhcccc-------CCCcEEEEeccCcCCCC
Confidence 56666533 34799999999999999987 5556766533 11 0011110 12223322111100000
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-ee-eecCCeEEEEeecCCcchHHHHhhhhcccccCchh
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (309)
...+.....+.+..+..+.+.+++.+||++++.++..+... ++ +..+.|+++++|...
T Consensus 66 ~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------- 125 (357)
T PRK00726 66 SLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV-------------------- 125 (357)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC--------------------
Confidence 00111112333334444455677889999998875444333 22 345778887665421
Q ss_pred hhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC----CCCCC
Q 021684 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERSTE 268 (309)
Q Consensus 193 y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~----~~~~~ 268 (309)
.+... ++..+.+|.+++.|+.+. .+ .+ ++++.|++||++.+.+..... ..+..
T Consensus 126 -------~~~~~-----------r~~~~~~d~ii~~~~~~~---~~-~~-~~~i~vi~n~v~~~~~~~~~~~~~~~~~~~ 182 (357)
T PRK00726 126 -------PGLAN-----------KLLARFAKKVATAFPGAF---PE-FF-KPKAVVTGNPVREEILALAAPPARLAGREG 182 (357)
T ss_pred -------ccHHH-----------HHHHHHhchheECchhhh---hc-cC-CCCEEEECCCCChHhhcccchhhhccCCCC
Confidence 00111 112245899999998542 22 22 689999999998765542110 01123
Q ss_pred CcEEEEEcCCccccChhhhh-ccchhHhhhcccCCCCCccCC
Q 021684 269 YPAIISVAQFRPEKVRYKLI-STSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 269 ~~~iLsVGRl~p~Kn~~~lI-~A~~f~~l~~~~~~~~~~~~~ 309 (309)
++.++.+|+..+.|++..++ +| ++.+.+. ...+.+||
T Consensus 183 ~~~i~~~gg~~~~~~~~~~l~~a--~~~~~~~--~~~~~~~G 220 (357)
T PRK00726 183 KPTLLVVGGSQGARVLNEAVPEA--LALLPEA--LQVIHQTG 220 (357)
T ss_pred CeEEEEECCcHhHHHHHHHHHHH--HHHhhhC--cEEEEEcC
Confidence 56789999999999876555 89 8887543 23345555
No 59
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.92 E-value=7.3e-09 Score=102.58 Aligned_cols=155 Identities=15% Similarity=0.094 Sum_probs=102.3
Q ss_pred cCCcEEEeCCCCccccc--e-eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHH
Q 021684 139 FTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMY 215 (309)
Q Consensus 139 ~~pdv~iss~~~a~~~p--~-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~ 215 (309)
.++|+++..++.....+ + ++..+.|.|.-.|.-. ..+ +.. +...........+..+.+++..+.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~-~~e--~~~----------~~~~~~~~~~~~~~~~~~~~~~l~ 238 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIY-TRE--RKI----------ELLQADWEMSYFRRLWIRFFESLG 238 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCcc-HHH--HHH----------HHHhcccchHHHHHHHHHHHHHHH
Confidence 36789987643211111 1 2245788888888632 000 000 000000001233455556666677
Q ss_pred HHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCC-CCCCCCcEEEEEcCCccccChhhhhccchh
Q 021684 216 GLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-ERSTEYPAIISVAQFRPEKVRYKLISTSCL 293 (309)
Q Consensus 216 ~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~-~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f 293 (309)
+.+++.||.|++.|+.+++.+.+ +|. ++++.||||++|.+.+..... ........++++||+.|.|+++.+|+| +
T Consensus 239 ~~~~~~ad~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a--~ 315 (475)
T cd03813 239 RLAYQAADRITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRA--A 315 (475)
T ss_pred HHHHHhCCEEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCccccccCCCCcEEEEEeccccccCHHHHHHH--H
Confidence 78889999999999999987765 454 578999999999988863221 112235789999999999999999999 9
Q ss_pred HhhhcccCCCCCccCC
Q 021684 294 EEIRCRLASAQTPICG 309 (309)
Q Consensus 294 ~~l~~~~~~~~~~~~~ 309 (309)
+.+.++..+.++.|+|
T Consensus 316 ~~l~~~~p~~~l~IvG 331 (475)
T cd03813 316 AIVRKKIPDAEGWVIG 331 (475)
T ss_pred HHHHHhCCCeEEEEEC
Confidence 9998876666777766
No 60
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.85 E-value=3.7e-08 Score=92.57 Aligned_cols=195 Identities=12% Similarity=0.084 Sum_probs=108.0
Q ss_pred CCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhhhHH
Q 021684 45 NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (309)
Q Consensus 45 ~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~ 124 (309)
+..||.++++.+++++|.+.| +++.+.|...... .+... ..++++..+..........+..+.-++.
T Consensus 7 ~~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (350)
T cd03785 7 GGTGGHIFPALALAEELRERG--AEVLFLGTKRGLE----ARLVP-------KAGIPLHTIPVGGLRRKGSLKKLKAPFK 73 (350)
T ss_pred cCchhhhhHHHHHHHHHHhCC--CEEEEEECCCcch----hhccc-------ccCCceEEEEecCcCCCChHHHHHHHHH
Confidence 366799999999999999987 5556776543110 00000 0112222221111000000001111122
Q ss_pred HHhHHHHHHHHHhccCCcEEEeCCCCccccc-e-eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhH
Q 021684 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (309)
Q Consensus 125 ~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 202 (309)
.+.....+.+.+++.+||+++.+++..+... + ++..+.|.+++.|... ...
T Consensus 74 ~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~---------------------------~~~ 126 (350)
T cd03785 74 LLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAV---------------------------PGL 126 (350)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCC---------------------------ccH
Confidence 2222233345577889999998765332222 2 2345778876655432 000
Q ss_pred hHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccC----CCCCCCCcEEEEEcCC
Q 021684 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTEYPAIISVAQF 278 (309)
Q Consensus 203 ~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~----~~~~~~~~~iLsVGRl 278 (309)
.. ++..+.+|.|++.|+..++. +. ++++.+++||++.+.+...+ ...+..+++++++|+.
T Consensus 127 ~~-----------~~~~~~~~~vi~~s~~~~~~----~~-~~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~g~ 190 (350)
T cd03785 127 AN-----------RLLARFADRVALSFPETAKY----FP-KDKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFGGS 190 (350)
T ss_pred HH-----------HHHHHhhCEEEEcchhhhhc----CC-CCcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEECCc
Confidence 01 11224589999999998876 33 58999999999877553211 1112235678899998
Q ss_pred ccccChhh-hhccchhHhhh
Q 021684 279 RPEKVRYK-LISTSCLEEIR 297 (309)
Q Consensus 279 ~p~Kn~~~-lI~A~~f~~l~ 297 (309)
.+.|+++. +++| ++.+.
T Consensus 191 ~~~~~~~~~l~~a--~~~l~ 208 (350)
T cd03785 191 QGARAINEAVPEA--LAELL 208 (350)
T ss_pred HhHHHHHHHHHHH--HHHhh
Confidence 88888764 5688 77775
No 61
>PRK14098 glycogen synthase; Provisional
Probab=98.77 E-value=7.9e-08 Score=95.70 Aligned_cols=90 Identities=21% Similarity=0.152 Sum_probs=68.4
Q ss_pred HHhcCCCcEEEEcCHHHHHHHHHH----hCC-------CCCceEecCCCCCCCCcccCC---------------------
Q 021684 216 GLVGSCADLAMVNSSWTQSHIEKL----WGI-------PDRIKRVYPPCDTSGLQVLPL--------------------- 263 (309)
Q Consensus 216 ~~~~~~ad~vIaNS~~t~~~i~~~----~~~-------~~~~~VIYPPVd~~~~~~~~~--------------------- 263 (309)
+.+...||.|+++|...+++|.+. +|+ +.++.+|+|.||++.+.....
T Consensus 215 k~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~ 294 (489)
T PRK14098 215 YTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKA 294 (489)
T ss_pred HHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHH
Confidence 345578999999999999999863 332 368999999999987752100
Q ss_pred -------CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 -------ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 -------~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
..+.+.+.++++||+.++|+++++|+| ++.+.++ +.+++++|
T Consensus 295 l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a--~~~l~~~--~~~lvivG 343 (489)
T PRK14098 295 LLEEVGLPFDEETPLVGVIINFDDFQGAELLAES--LEKLVEL--DIQLVICG 343 (489)
T ss_pred HHHHhCCCCccCCCEEEEeccccccCcHHHHHHH--HHHHHhc--CcEEEEEe
Confidence 001124689999999999999999999 9988653 56777776
No 62
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.73 E-value=7.1e-08 Score=91.42 Aligned_cols=144 Identities=19% Similarity=0.134 Sum_probs=94.9
Q ss_pred cCCcEEEeCCCCccccceee-ecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHH
Q 021684 139 FTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL 217 (309)
Q Consensus 139 ~~pdv~iss~~~a~~~p~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~ 217 (309)
.++|+++.+.......++.. ....+.+.++|...... .... ..+.++..+...+ .
T Consensus 98 ~~~diii~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------~~~~------~~~~~~~~~~~~~-----~ 153 (372)
T cd04949 98 TKPDVFILDRPTLDGQALLNMKKAAKVVVVLHSNHVSD-------------NNDP------VHSLINNFYEYVF-----E 153 (372)
T ss_pred CCCCEEEECCccccchhHHhccCCceEEEEEChHHhCC-------------cccc------cccccchhhHHHH-----h
Confidence 67998887765443333322 23456788888764110 0000 0011122222211 1
Q ss_pred hcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccccChhhhhccchhHhhh
Q 021684 218 VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIR 297 (309)
Q Consensus 218 ~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~ 297 (309)
..+++|.+|+.|+.+++.+.+.++...++.||+++++.+.+...+.. ...+..++++||+.++|+++.+|+| ++.+.
T Consensus 154 ~~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~~~-~~~~~~i~~vgrl~~~K~~~~li~a--~~~l~ 230 (372)
T cd04949 154 NLDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQFK-QRKPHKIITVARLAPEKQLDQLIKA--FAKVV 230 (372)
T ss_pred ChhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhcccchh-hcCCCeEEEEEccCcccCHHHHHHH--HHHHH
Confidence 23679999999999999999999743348899999987766421111 1235789999999999999999999 99998
Q ss_pred cccCCCCCccCC
Q 021684 298 CRLASAQTPICG 309 (309)
Q Consensus 298 ~~~~~~~~~~~~ 309 (309)
++..+..+.++|
T Consensus 231 ~~~~~~~l~i~G 242 (372)
T cd04949 231 KQVPDATLDIYG 242 (372)
T ss_pred HhCCCcEEEEEE
Confidence 887777777776
No 63
>PLN02939 transferase, transferring glycosyl groups
Probab=98.72 E-value=7.9e-07 Score=93.28 Aligned_cols=260 Identities=12% Similarity=0.035 Sum_probs=139.3
Q ss_pred hhhhccCCCCcEEEEEcC----CCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhh-------hcC
Q 021684 25 HVHNARRNRTTSVAFFHP----NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-------RFG 93 (309)
Q Consensus 25 ~~~~~~~~~~~rIa~~hp----~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~-------~~~ 93 (309)
++.+....+.|+|.|+-. +. .-||-.-|+-.|.++|++.| +++.|+++.++.-.......++. .++
T Consensus 472 ~~~~~~~~~~mkILfVasE~aP~a-KtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~ 548 (977)
T PLN02939 472 KLTLSGTSSGLHIVHIAAEMAPVA-KVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFD 548 (977)
T ss_pred HhccCCCCCCCEEEEEEccccccc-ccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhcccccceEEEEeec
Confidence 455555678899999864 44 56799999999999999988 55567777653211010010100 010
Q ss_pred cc---------cCCCCeEEEcccc----ceeecccC--C----chhhhHHHHhHHHHHHHHHhc--cCCcEEEeCCCCcc
Q 021684 94 VE---------LLHPPKVVHLYRR----KWIEESTY--P----RFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAF 152 (309)
Q Consensus 94 ~~---------l~~~~~~v~l~~~----~~~~~~~~--~----~~~l~~~~l~~~~~~~~~l~~--~~pdv~iss~~~a~ 152 (309)
.. ..+++.+.-+... .+-.+..| + +|..+++ .+.+.+.. .+||+++...+++.
T Consensus 549 g~~~~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~Fsr------AaLe~~~~~~~~PDIIH~HDW~Ta 622 (977)
T PLN02939 549 GNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSR------AALELLYQSGKKPDIIHCHDWQTA 622 (977)
T ss_pred CceeEEEEEEEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHH------HHHHHHHhcCCCCCEEEECCccHH
Confidence 00 0011211111100 00111111 1 1222211 12233433 58999998877765
Q ss_pred cc-ceee-------ecCCeEEEEeecCCcchHHHHhhhhcccccCchh--hhhhcc-hh---hHhHHHHHHHHHHHHHHh
Q 021684 153 TY-PLAR-------IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA--SIAQSN-WL---SQCKIVYYTFFSWMYGLV 218 (309)
Q Consensus 153 ~~-p~a~-------~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~--y~~~~~-~~---~~~k~~y~~~~~~~~~~~ 218 (309)
.+ |+.+ ..+.+++.-||+-...- .++.+. +.+-.. .. ..+..-+..-+. +.+..
T Consensus 623 LV~pll~~~y~~~~~~~~ktVfTIHNl~yQG-----------~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN-~LK~G 690 (977)
T PLN02939 623 FVAPLYWDLYAPKGFNSARICFTCHNFEYQG-----------TAPASDLASCGLDVHQLDRPDRMQDNAHGRIN-VVKGA 690 (977)
T ss_pred HHHHHHHHHHhhccCCCCcEEEEeCCCcCCC-----------cCCHHHHHHcCCCHHHccChhhhhhccCCchH-HHHHH
Confidence 55 4321 23467888899864100 011000 000000 00 000000000000 11122
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhC--------C-CCCceEecCCCCCCCCccc-C----C---------------------
Q 021684 219 GSCADLAMVNSSWTQSHIEKLWG--------I-PDRIKRVYPPCDTSGLQVL-P----L--------------------- 263 (309)
Q Consensus 219 ~~~ad~vIaNS~~t~~~i~~~~~--------~-~~~~~VIYPPVd~~~~~~~-~----~--------------------- 263 (309)
.-.||.|+++|...++.|...+| . +.++.+|+|.+|++.+... . .
T Consensus 691 Iv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkel 770 (977)
T PLN02939 691 IVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQL 770 (977)
T ss_pred HHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHh
Confidence 23699999999999999987443 1 5688999999998876421 0 0
Q ss_pred --CCC-CCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 --ERS-TEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 --~~~-~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
... ...+++++||||.++|+++++++| +..+.+ .+.+++++|
T Consensus 771 GL~~~d~d~pLIg~VGRL~~QKGiDlLleA--~~~Ll~--~dvqLVIvG 815 (977)
T PLN02939 771 GLSSADASQPLVGCITRLVPQKGVHLIRHA--IYKTAE--LGGQFVLLG 815 (977)
T ss_pred CCCcccccceEEEEeecCCcccChHHHHHH--HHHHhh--cCCEEEEEe
Confidence 000 124789999999999999999999 987754 256788776
No 64
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.70 E-value=3.9e-07 Score=89.78 Aligned_cols=236 Identities=12% Similarity=0.021 Sum_probs=118.8
Q ss_pred CCCcEEEEEcC-CCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChh--------------hHHHHHhhhcCccc
Q 021684 32 NRTTSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPD--------------SLLARAVDRFGVEL 96 (309)
Q Consensus 32 ~~~~rIa~~hp-~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~--------------~~~~~~~~~~~~~l 96 (309)
+.+||||||=+ ++-.-+|.-.-....+..|.++|. +++.|+........+ +....++.+ +
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~----~ 76 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQW----L 76 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhhhhhhhh----c
Confidence 57899999877 555667888888888889999882 345666553210000 000001110 0
Q ss_pred CCCCeEEEccccceeecccCCc-hhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce---ee-ec-C-CeEEEEee
Q 021684 97 LHPPKVVHLYRRKWIEESTYPR-FTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---AR-IF-G-CRVICYTH 169 (309)
Q Consensus 97 ~~~~~~v~l~~~~~~~~~~~~~-~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~---a~-~~-~-~~~i~Y~H 169 (309)
.+ +++-+ ..+..+ .+|- +......+.......+.+++.+||+++.... +.+.. ++ .. + .+++...|
T Consensus 77 ~~--~v~r~--~s~~~p-~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP--~~LG~~~~g~~~~~k~~~vV~tyH 149 (462)
T PLN02846 77 EE--RISFL--PKFSIK-FYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEP--EHLTWYHHGKRWKTKFRLVIGIVH 149 (462)
T ss_pred cC--eEEEe--cccccc-cCcccccccccccCChHHHHHHHHhcCCCEEEEcCc--hhhhhHHHHHHHHhcCCcEEEEEC
Confidence 11 11111 011111 1221 1110011001122345677889998886654 22332 11 11 1 33555678
Q ss_pred cCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEe
Q 021684 170 YPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV 249 (309)
Q Consensus 170 ~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VI 249 (309)
+.. . .|+.... .+..+....+.+..+..+. .+|.+++.|..+++ +.+ ...+.
T Consensus 150 T~y-----~-------------~Y~~~~~-~g~~~~~l~~~~~~~~~r~--~~d~vi~pS~~~~~-l~~------~~i~~ 201 (462)
T PLN02846 150 TNY-----L-------------EYVKREK-NGRVKAFLLKYINSWVVDI--YCHKVIRLSAATQD-YPR------SIICN 201 (462)
T ss_pred CCh-----H-------------HHHHHhc-cchHHHHHHHHHHHHHHHH--hcCEEEccCHHHHH-Hhh------CEEec
Confidence 842 1 1221111 0111222222222222221 38999999986655 432 12222
Q ss_pred cCCCCCCCCcccCC----C-CCCC--CcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 250 YPPCDTSGLQVLPL----E-RSTE--YPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 250 YPPVd~~~~~~~~~----~-~~~~--~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
-+.||.+.|..... . ...+ .+.+++||||.++||++.+|+| |+.+.++..+.+++|.|
T Consensus 202 v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a--~~~l~~~~~~~~l~ivG 266 (462)
T PLN02846 202 VHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKL--LHKHQKELSGLEVDLYG 266 (462)
T ss_pred CceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHH--HHHHHhhCCCeEEEEEC
Confidence 26788776652100 0 0111 2358999999999999999999 99987766555666655
No 65
>PLN00142 sucrose synthase
Probab=98.62 E-value=3e-07 Score=95.53 Aligned_cols=152 Identities=14% Similarity=0.066 Sum_probs=89.3
Q ss_pred cCCcEEEeCCCCccccce--eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHH-HHH
Q 021684 139 FTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMY 215 (309)
Q Consensus 139 ~~pdv~iss~~~a~~~p~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~-~~~ 215 (309)
.+||++++..+.++.++. ++..+.|.+.-.|+-. +. ++ +.....|.. .-..|...-+ ...
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~--k~--K~-~~~~~~~~~------------~e~~y~~~~r~~aE 469 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALE--KT--KY-PDSDIYWKK------------FDDKYHFSCQFTAD 469 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccch--hh--hc-cccCCcccc------------cchhhhhhhchHHH
Confidence 459999988776655553 3356888887778642 10 11 000000000 0001110000 113
Q ss_pred HHhcCCCcEEEEcCHHHHH----HH--------------HHHh-CC---CCCceEecCCCCCCCCcccC-----C-----
Q 021684 216 GLVGSCADLAMVNSSWTQS----HI--------------EKLW-GI---PDRIKRVYPPCDTSGLQVLP-----L----- 263 (309)
Q Consensus 216 ~~~~~~ad~vIaNS~~t~~----~i--------------~~~~-~~---~~~~~VIYPPVd~~~~~~~~-----~----- 263 (309)
..+...||.|||+|..-.. +| .+.. |+ ..++.||.|.+|.+.|.... .
T Consensus 470 ~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n 549 (815)
T PLN00142 470 LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHP 549 (815)
T ss_pred HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcc
Confidence 4566789999999965543 22 1111 11 34789999999988764100 0
Q ss_pred ----------------C--CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 264 ----------------E--RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 264 ----------------~--~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
. .+...++++++|||.++||++.+|+| |+++.+...+.+++|+|
T Consensus 550 ~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA--~a~l~~l~~~~~LVIVG 611 (815)
T PLN00142 550 SIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEW--YGKNKRLRELVNLVVVG 611 (815)
T ss_pred cchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHH--HHHHHHhCCCcEEEEEE
Confidence 0 01235699999999999999999999 99886544456777765
No 66
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.61 E-value=2.5e-07 Score=92.37 Aligned_cols=148 Identities=11% Similarity=0.028 Sum_probs=91.3
Q ss_pred HHHhccCCcEEEeCCCCccccceee-ecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHH
Q 021684 134 EALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (309)
Q Consensus 134 ~~l~~~~pdv~iss~~~a~~~p~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~ 212 (309)
+.|...++|+++..-......++.. ..+.|.+..+|...++... .. .. ...+...|..
T Consensus 205 ~~L~~~~~di~i~dr~~~~~~~~~~~~~~~~~v~~lH~~h~~~~~-----------~~-----~~--~~~~~~~y~~--- 263 (500)
T TIGR02918 205 KQLNLTKKDIIILDRSTGIGQAVLENKGPAKLGVVVHAEHFSESA-----------TN-----ET--YILWNNYYEY--- 263 (500)
T ss_pred HHHhCCCCCEEEEcCCcccchHHHhcCCCceEEEEEChhhhcCcc-----------Cc-----ch--hHHHHHHHHH---
Confidence 4455567898776543232323322 3467888899975421100 00 00 0011222211
Q ss_pred HHHHHhcCCCcEEEEcCHHHHHHHHHHhCC----CCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccccChhhhh
Q 021684 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI----PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLI 288 (309)
Q Consensus 213 ~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~----~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~Kn~~~lI 288 (309)
.. ..++.+|.+|+.|+..++.+.+.++. ..++.||+++++.+.+. +.. ..++..++++||+.++|+++.+|
T Consensus 264 -~~-~~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~--~~~-~r~~~~il~vGrl~~~Kg~~~li 338 (500)
T TIGR02918 264 -QF-SNADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQY--PEQ-ERKPFSIITASRLAKEKHIDWLV 338 (500)
T ss_pred -HH-hchhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccC--ccc-ccCCeEEEEEeccccccCHHHHH
Confidence 11 12467999999999999999987751 35677887776543332 211 12245799999999999999999
Q ss_pred ccchhHhhhcccCCCCCccCC
Q 021684 289 STSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 289 ~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+| |+.+.++..+.++.+.|
T Consensus 339 ~A--~~~l~~~~p~~~l~i~G 357 (500)
T TIGR02918 339 KA--VVKAKKSVPELTFDIYG 357 (500)
T ss_pred HH--HHHHHhhCCCeEEEEEE
Confidence 99 99998777666666665
No 67
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.56 E-value=7.5e-07 Score=83.65 Aligned_cols=191 Identities=13% Similarity=0.123 Sum_probs=101.6
Q ss_pred CChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhhhHHHH
Q 021684 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (309)
Q Consensus 47 gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~~l 126 (309)
-||.+....+++++|.+.| +++.++|... ... ..+....+ +++..+....+........+...+..+
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~--~~~---~~~~~~~g------~~~~~i~~~~~~~~~~~~~l~~~~~~~ 76 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKR--GLE---KRLVPKAG------IEFYFIPVGGLRRKGSFRLIKTPLKLL 76 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCC--cch---hcccccCC------CceEEEeccCcCCCChHHHHHHHHHHH
Confidence 3466667779999999887 5666777532 110 01100112 222222211111000000111112222
Q ss_pred hHHHHHHHHHhccCCcEEEeCCCCccccc-e-eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhH
Q 021684 127 GSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCK 204 (309)
Q Consensus 127 ~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k 204 (309)
..+....+.+++.+||+++++.+..+... + ++..+.|.+.+.|... .+..
T Consensus 77 ~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------------------------~~~~- 128 (348)
T TIGR01133 77 KAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV---------------------------PGLT- 128 (348)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC---------------------------ccHH-
Confidence 33334455678889999998765432222 2 2345667764333211 0000
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccC----CCCCCCCcEEEEEcCCcc
Q 021684 205 IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTEYPAIISVAQFRP 280 (309)
Q Consensus 205 ~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~----~~~~~~~~~iLsVGRl~p 280 (309)
.++..+.+|.+++.|+++++.+ +..||+||++.+.+.... ...+.++..++++||..+
T Consensus 129 ----------~~~~~~~~d~ii~~~~~~~~~~--------~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~gg~~~ 190 (348)
T TIGR01133 129 ----------NKLLSRFAKKVLISFPGAKDHF--------EAVLVGNPVRQEIRSLPVPRERFGLREGKPTILVLGGSQG 190 (348)
T ss_pred ----------HHHHHHHhCeeEECchhHhhcC--------CceEEcCCcCHHHhcccchhhhcCCCCCCeEEEEECCchh
Confidence 1222356899999999887664 237899999855442110 011123568889999999
Q ss_pred ccChhh-hhccchhHhhhc
Q 021684 281 EKVRYK-LISTSCLEEIRC 298 (309)
Q Consensus 281 ~Kn~~~-lI~A~~f~~l~~ 298 (309)
+|++.. +++| ++.+.+
T Consensus 191 ~~~~~~~l~~a--~~~l~~ 207 (348)
T TIGR01133 191 AKILNELVPKA--LAKLAE 207 (348)
T ss_pred HHHHHHHHHHH--HHHHhh
Confidence 999754 5688 887754
No 68
>PHA01630 putative group 1 glycosyl transferase
Probab=98.55 E-value=1.6e-07 Score=89.07 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=65.0
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhC-CCCCceEecCCCCCCCCcccCCCCCCCCcEEE-EEcCCccccChhhhhccchhHhh
Q 021684 219 GSCADLAMVNSSWTQSHIEKLWG-IPDRIKRVYPPCDTSGLQVLPLERSTEYPAII-SVAQFRPEKVRYKLISTSCLEEI 296 (309)
Q Consensus 219 ~~~ad~vIaNS~~t~~~i~~~~~-~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iL-sVGRl~p~Kn~~~lI~A~~f~~l 296 (309)
.+++|.++++|+++++.+.+..- .++++.||||+||++.|.... ...+.++++ ++||+.++|+++.+|+| |+.+
T Consensus 92 ~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~--~~~~~~~vl~~~g~~~~~Kg~d~Li~A--~~~l 167 (331)
T PHA01630 92 NQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKP--KEKPHPCVLAILPHSWDRKGGDIVVKI--FHEL 167 (331)
T ss_pred hccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCc--cccCCCEEEEEeccccccCCHHHHHHH--HHHH
Confidence 37799999999999999987632 135889999999988775321 111234444 66788999999999999 9999
Q ss_pred hcccCCCCCccCC
Q 021684 297 RCRLASAQTPICG 309 (309)
Q Consensus 297 ~~~~~~~~~~~~~ 309 (309)
.++..+.++.++|
T Consensus 168 ~~~~~~~~llivG 180 (331)
T PHA01630 168 QNEGYDFYFLIKS 180 (331)
T ss_pred HhhCCCEEEEEEe
Confidence 7765555665554
No 69
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.35 E-value=9.7e-07 Score=85.72 Aligned_cols=79 Identities=18% Similarity=0.164 Sum_probs=65.1
Q ss_pred hcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccccChhhhhccchhHhh
Q 021684 218 VGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEI 296 (309)
Q Consensus 218 ~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l 296 (309)
+.+++|.|+++|+..++.+.+.|+. ..++.|+|++++.+.+... ....++..++++||+.++|+++.+|+| |+.+
T Consensus 180 ~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~--~~~~~~~~il~~Grl~~~Kg~~~li~a--~~~l 255 (407)
T cd04946 180 LLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISK--PSKDDTLRIVSCSYLVPVKRVDLIIKA--LAAL 255 (407)
T ss_pred HHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCC--CCCCCCEEEEEeeccccccCHHHHHHH--HHHH
Confidence 3578999999999999999999985 5678899999987766421 112235689999999999999999999 9999
Q ss_pred hccc
Q 021684 297 RCRL 300 (309)
Q Consensus 297 ~~~~ 300 (309)
.++.
T Consensus 256 ~~~~ 259 (407)
T cd04946 256 AKAR 259 (407)
T ss_pred HHhC
Confidence 7654
No 70
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.34 E-value=2.2e-06 Score=87.31 Aligned_cols=146 Identities=12% Similarity=-0.021 Sum_probs=86.3
Q ss_pred HHHHhccCCcEEEeCCC-Ccccc--c--eeeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHH
Q 021684 133 WEALCKFTPLYYFDTSG-YAFTY--P--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207 (309)
Q Consensus 133 ~~~l~~~~pdv~iss~~-~a~~~--p--~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y 207 (309)
.+.+...+||+++-... +.... + .++..+ |++.-+|+.. . .|+.... .+.+..+.
T Consensus 427 ~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny-~-----------------eYl~~y~-~g~L~~~l 486 (794)
T PLN02501 427 SQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNY-L-----------------EYIKREK-NGALQAFF 486 (794)
T ss_pred HHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCc-H-----------------HHHhHhc-chhHHHHH
Confidence 45577789997774432 33333 1 222345 7888888874 1 1222221 12333333
Q ss_pred HHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC-------CCCCCCcEEEEEcCCcc
Q 021684 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------ERSTEYPAIISVAQFRP 280 (309)
Q Consensus 208 ~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~-------~~~~~~~~iLsVGRl~p 280 (309)
++....+..+.. +|.|++.|..+++ + . ..-+..+ +.||++.|..... .....++.+++||||.+
T Consensus 487 lk~l~~~v~r~h--cD~VIaPS~atq~-L----~-~~vI~nV-nGVDte~F~P~~r~~~~r~lgi~~~~kgiLfVGRLa~ 557 (794)
T PLN02501 487 VKHINNWVTRAY--CHKVLRLSAATQD-L----P-KSVICNV-HGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKMVW 557 (794)
T ss_pred HHHHHHHHHHhh--CCEEEcCCHHHHH-h----c-ccceeec-ccccccccCCcchhHHHHhcCCccccCceEEEEcccc
Confidence 333323333322 8999999988883 3 2 1112222 5999988763110 01111245899999999
Q ss_pred ccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 281 EKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 281 ~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
+||++.+|+| ++.+.++..+..++|+|
T Consensus 558 EKGld~LLeA--la~L~~~~pnvrLvIVG 584 (794)
T PLN02501 558 AKGYRELIDL--LAKHKNELDGFNLDVFG 584 (794)
T ss_pred cCCHHHHHHH--HHHHHhhCCCeEEEEEc
Confidence 9999999999 99987776666777776
No 71
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.23 E-value=5.8e-06 Score=79.11 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=50.5
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccC-------CCCCCCCcE-EEEEcCCccccChhhhhc
Q 021684 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPA-IISVAQFRPEKVRYKLIS 289 (309)
Q Consensus 219 ~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~-------~~~~~~~~~-iLsVGRl~p~Kn~~~lI~ 289 (309)
.+++|.+++.|+.+++.+.+. |+ ++++.|+.+|++.+...... ..-+.++++ +++.|++...|+++.+++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~~-gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~ 223 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVDI-GVPPEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQ 223 (380)
T ss_pred cCCCCEEEECCHHHHHHHHHc-CCChhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHH
Confidence 378999999999999999884 65 56788888888632111100 000112344 456689999999999999
Q ss_pred cchhHh
Q 021684 290 TSCLEE 295 (309)
Q Consensus 290 A~~f~~ 295 (309)
+ +..
T Consensus 224 ~--l~~ 227 (380)
T PRK13609 224 S--LMS 227 (380)
T ss_pred H--Hhh
Confidence 8 653
No 72
>PHA01633 putative glycosyl transferase group 1
Probab=98.22 E-value=2.4e-06 Score=81.05 Aligned_cols=77 Identities=10% Similarity=0.136 Sum_probs=57.8
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccC---------CCCC-CCCcEEEEEcCCccccChhhhhc
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP---------LERS-TEYPAIISVAQFRPEKVRYKLIS 289 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~---------~~~~-~~~~~iLsVGRl~p~Kn~~~lI~ 289 (309)
.+.+.+||||++|++++++. |.+.+ .+|++.+|++.|.... .... .....++++||++++|+++.+|+
T Consensus 91 ~~~~~vIavS~~t~~~L~~~-G~~~~-i~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~ 168 (335)
T PHA01633 91 LQDVKFIPNSKFSAENLQEV-GLQVD-LPVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQ 168 (335)
T ss_pred hcCCEEEeCCHHHHHHHHHh-CCCCc-eeeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHH
Confidence 45679999999999999986 43344 4688999988775311 0000 12457899999999999999999
Q ss_pred cchhHhhhccc
Q 021684 290 TSCLEEIRCRL 300 (309)
Q Consensus 290 A~~f~~l~~~~ 300 (309)
| |+.+.++.
T Consensus 169 A--~~~L~~~~ 177 (335)
T PHA01633 169 V--FNELNTKY 177 (335)
T ss_pred H--HHHHHHhC
Confidence 9 99997654
No 73
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=98.21 E-value=2.6e-06 Score=85.31 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=68.7
Q ss_pred HHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccC---------------C-----CC----CCCC
Q 021684 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP---------------L-----ER----STEY 269 (309)
Q Consensus 214 ~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~---------------~-----~~----~~~~ 269 (309)
+.+.++..||.|+|+|+.|++++...|+.+.+. ||+|.+|++.|.... . .. +..+
T Consensus 219 iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~ 297 (590)
T cd03793 219 IERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK 297 (590)
T ss_pred HHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence 356777899999999999999999999963333 999999998875311 0 00 1123
Q ss_pred cEEEE-EcCCcc-ccChhhhhccchhHhhhcccCC---CCCccC
Q 021684 270 PAIIS-VAQFRP-EKVRYKLISTSCLEEIRCRLAS---AQTPIC 308 (309)
Q Consensus 270 ~~iLs-VGRl~p-~Kn~~~lI~A~~f~~l~~~~~~---~~~~~~ 308 (309)
..+++ +||++. +|.+|.+|+| +++|...+.. +.+|+|
T Consensus 298 tli~f~~GR~e~~nKGiDvlIeA--l~rLn~~l~~~~~~~tVva 339 (590)
T cd03793 298 TLYFFTAGRYEFSNKGADMFLEA--LARLNYLLKVEGSDTTVVA 339 (590)
T ss_pred eEEEEEeeccccccCCHHHHHHH--HHHHHHHHHhcCCCCeEEE
Confidence 56666 899999 9999999999 9999776643 344554
No 74
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.15 E-value=0.00036 Score=67.88 Aligned_cols=89 Identities=12% Similarity=0.071 Sum_probs=58.3
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCC---------CCCCCCcEEEEEcCCccccChh
Q 021684 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL---------ERSTEYPAIISVAQFRPEKVRY 285 (309)
Q Consensus 215 ~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~---------~~~~~~~~iLsVGRl~p~Kn~~ 285 (309)
.++..+++|.|+++|+.+++.+.+. |.+.++.|++|. +.+....... ......++++++|+. +|+.+
T Consensus 172 ~r~~~~~~d~ii~~S~~~~~~l~~~-g~~~~i~vi~n~-~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~~ 247 (425)
T PRK05749 172 YRLLFKNIDLVLAQSEEDAERFLAL-GAKNEVTVTGNL-KFDIEVPPELAARAATLRRQLAPNRPVWIAASTH--EGEEE 247 (425)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCCCCcEecccc-cccCCCChhhHHHHHHHHHHhcCCCcEEEEeCCC--chHHH
Confidence 4445577999999999999999885 542226777664 3332211000 000235688888874 68899
Q ss_pred hhhccchhHhhhcccCCCCCccCC
Q 021684 286 KLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 286 ~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.+|+| |+.+.++..+..++|.|
T Consensus 248 ~ll~A--~~~l~~~~~~~~liivG 269 (425)
T PRK05749 248 LVLDA--HRALLKQFPNLLLILVP 269 (425)
T ss_pred HHHHH--HHHHHHhCCCcEEEEcC
Confidence 99999 99987665555666654
No 75
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.13 E-value=1.2e-05 Score=77.36 Aligned_cols=88 Identities=17% Similarity=0.128 Sum_probs=63.4
Q ss_pred cCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccC--------CCCCCCCcEEEEEcCCccccChhhhhc
Q 021684 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP--------LERSTEYPAIISVAQFRPEKVRYKLIS 289 (309)
Q Consensus 219 ~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~--------~~~~~~~~~iLsVGRl~p~Kn~~~lI~ 289 (309)
.+.+|.+++.|+.+++.+.+. |. ++++.|+.+|++.+...... ..-+...+.++.+||..+.|++..+++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~ 226 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALKR-GLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETAR 226 (382)
T ss_pred cCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHH
Confidence 378999999999999999877 55 67889999999864332110 001123578999999999999999999
Q ss_pred cchhHhhh-c---ccCCCC-CccCC
Q 021684 290 TSCLEEIR-C---RLASAQ-TPICG 309 (309)
Q Consensus 290 A~~f~~l~-~---~~~~~~-~~~~~ 309 (309)
+ +..+. + +..+.+ +++||
T Consensus 227 ~--l~~~~~~~~~~~~~~~~~vi~G 249 (382)
T PLN02605 227 A--LGDSLYDKNLGKPIGQVVVICG 249 (382)
T ss_pred H--HHHhhccccccCCCceEEEEEC
Confidence 9 87642 1 123344 67887
No 76
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.03 E-value=2.3e-05 Score=75.81 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=56.4
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccC-------CCCCCCCcE-EEEEcCCccccChhhhhcc
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPA-IISVAQFRPEKVRYKLIST 290 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~-------~~~~~~~~~-iLsVGRl~p~Kn~~~lI~A 290 (309)
+.+|.+++.|+.+++.+.+. |+ ++++.|+.+|++.+.....+ ..-+.+.+. +++.|++.+.|+++.++++
T Consensus 146 ~~~d~~~v~s~~~~~~l~~~-gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~ 224 (391)
T PRK13608 146 PYSTRYYVATKETKQDFIDV-GIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITD 224 (391)
T ss_pred CCCCEEEECCHHHHHHHHHc-CCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHH
Confidence 67999999999999999875 65 56788888998743221110 000112344 5578999999999999998
Q ss_pred chhHhhhcccCCCCC-ccCC
Q 021684 291 SCLEEIRCRLASAQT-PICG 309 (309)
Q Consensus 291 ~~f~~l~~~~~~~~~-~~~~ 309 (309)
+. +...+.+. ++||
T Consensus 225 --~~---~~~~~~~~vvv~G 239 (391)
T PRK13608 225 --IL---AKSANAQVVMICG 239 (391)
T ss_pred --HH---hcCCCceEEEEcC
Confidence 53 22233454 5676
No 77
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=97.81 E-value=1.7e-05 Score=74.52 Aligned_cols=224 Identities=14% Similarity=0.108 Sum_probs=127.8
Q ss_pred EEEEEcCC-CCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCc-ccCCCCeEEEccccceeec
Q 021684 36 SVAFFHPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGV-ELLHPPKVVHLYRRKWIEE 113 (309)
Q Consensus 36 rIa~~hp~-l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~-~l~~~~~~v~l~~~~~~~~ 113 (309)
+|+.+-|. +-..||.|-=+-.+.+.|-+.| +.+++.|-.+. + +-|+ .+.+...+..+.. .
T Consensus 2 ~i~mVsdff~P~~ggveshiy~lSq~li~lg--hkVvvithayg-~----------r~girylt~glkVyylp~---~-- 63 (426)
T KOG1111|consen 2 RILMVSDFFYPSTGGVESHIYALSQCLIRLG--HKVVVITHAYG-N----------RVGIRYLTNGLKVYYLPA---V-- 63 (426)
T ss_pred cceeeCcccccCCCChhhhHHHhhcchhhcC--CeEEEEecccc-C----------ccceeeecCCceEEEEee---e--
Confidence 45544442 2355899999999999999888 44466664331 1 1122 1223233333211 0
Q ss_pred ccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc--e--eeecCCeEEEEeecCCcchHHHHhhhhcccccC
Q 021684 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L--ARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (309)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p--~--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (309)
..+.-. -+.+.+..+|+.-..+.+++..++++.++.++..- + ++..|-+.+.--|+-. . +
T Consensus 64 v~~n~t-T~ptv~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlf-G-------------f- 127 (426)
T KOG1111|consen 64 VGYNQT-TFPTVFSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLF-G-------------F- 127 (426)
T ss_pred eeeccc-chhhhhccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccc-c-------------c-
Confidence 011111 11222233333333344567788886654332111 1 2334666666566631 0 0
Q ss_pred chhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCC-CCC
Q 021684 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-RST 267 (309)
Q Consensus 190 ~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~-~~~ 267 (309)
..+-...+..+.+.+....|++|++|+..++...=.-.+ +.++.||+|.++++.|...+.+ +..
T Consensus 128 --------------ad~~si~~n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~S~ 193 (426)
T KOG1111|consen 128 --------------ADIGSILTNKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKPSA 193 (426)
T ss_pred --------------cchhhhhhcceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccccCCC
Confidence 001111222345566678999999999888754333333 7899999999999999842111 221
Q ss_pred CCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 268 EYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 268 ~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.--.++.+|||...|..|+++++ ..++.++..+...+|-|
T Consensus 194 ~i~~ivv~sRLvyrKGiDll~~i--Ip~vc~~~p~vrfii~G 233 (426)
T KOG1111|consen 194 DIITIVVASRLVYRKGIDLLLEI--IPSVCDKHPEVRFIIIG 233 (426)
T ss_pred CeeEEEEEeeeeeccchHHHHHH--HHHHHhcCCCeeEEEec
Confidence 11579999999999999999999 88887776665555543
No 78
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=97.74 E-value=0.0014 Score=56.95 Aligned_cols=175 Identities=15% Similarity=0.103 Sum_probs=93.9
Q ss_pred cEEEEEcCC--CCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceee
Q 021684 35 TSVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (309)
Q Consensus 35 ~rIa~~hp~--l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~ 112 (309)
.+|||+=-- -...||-|..+.+|+..+++++ .++.||+...+.+. . .+.| .+++.+.+....
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~-~-----~~~y-----~gv~l~~i~~~~--- 65 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPY-K-----EFEY-----NGVRLVYIPAPK--- 65 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCC-C-----Cccc-----CCeEEEEeCCCC---
Confidence 467776331 2358899999999999998876 66788876432111 0 1111 122344442211
Q ss_pred cccCCchhhhHHHHhHHHHHHHHHhc--cCCcEEEeC-CC-Cccccceee-e--cCCeEEEEeecCCcchHHHHhhhhcc
Q 021684 113 ESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDT-SG-YAFTYPLAR-I--FGCRVICYTHYPTISLDMISRVREGS 185 (309)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~~~~~l~~--~~pdv~iss-~~-~a~~~p~a~-~--~~~~~i~Y~H~P~~s~~~~~~~~~~~ 185 (309)
..+.-++..-.+ ++..+.+..+. .+.|+++-. .+ .++..|+.+ + .|.+++.-.|... |+|
T Consensus 66 --~g~~~si~yd~~-sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlE---------WkR- 132 (185)
T PF09314_consen 66 --NGSAESIIYDFL-SLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLE---------WKR- 132 (185)
T ss_pred --CCchHHHHHHHH-HHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcch---------hhh-
Confidence 111111211111 12222222222 246644422 11 234445433 2 2457777566653 222
Q ss_pred cccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCC
Q 021684 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD 254 (309)
Q Consensus 186 ~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd 254 (309)
.. ++...+.|++ .-.+.+.+.+|.+||-|...++.+++.|+ ..++++|....|
T Consensus 133 -----------~K-W~~~~k~~lk---~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYGad 185 (185)
T PF09314_consen 133 -----------AK-WGRPAKKYLK---FSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYGAD 185 (185)
T ss_pred -----------hh-cCHHHHHHHH---HHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCCCC
Confidence 11 2223333433 44667789999999999999999999997 477888776543
No 79
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.65 E-value=0.00021 Score=61.42 Aligned_cols=34 Identities=26% Similarity=0.301 Sum_probs=28.8
Q ss_pred EEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684 274 SVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 274 sVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~ 309 (309)
++||+.++|+++.+++| ++.+.++..+.+..++|
T Consensus 109 ~~g~~~~~k~~~~~~~a--~~~l~~~~~~~~~~i~G 142 (229)
T cd01635 109 FVGRLAPEKGLDDLIEA--FALLKERGPDLKLVIAG 142 (229)
T ss_pred EEEeecccCCHHHHHHH--HHHHHHhCCCeEEEEEe
Confidence 88999999999999999 99998766666666654
No 80
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.52 E-value=0.00038 Score=67.34 Aligned_cols=132 Identities=10% Similarity=-0.015 Sum_probs=82.0
Q ss_pred HHHHHHHHhccCCcEEEeCCCCccccce---eeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHH
Q 021684 129 VYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (309)
Q Consensus 129 ~~~~~~~l~~~~pdv~iss~~~a~~~p~---a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~ 205 (309)
...+.+.+++.+||+++...+..+...+ ++..+.|++.|+ .|. .|.|.+ ...+
T Consensus 78 ~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~------~waw~~-----------------~~~r 133 (385)
T TIGR00215 78 RKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQ------VWAWRK-----------------WRAK 133 (385)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCc------HhhcCc-----------------chHH
Confidence 3345566788999988876543323224 235688998888 775 333321 1111
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCc--c-c-----CCCCCCCCcEEEEE--
Q 021684 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ--V-L-----PLERSTEYPAIISV-- 275 (309)
Q Consensus 206 ~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~--~-~-----~~~~~~~~~~iLsV-- 275 (309)
.+ .+.+|+|++.+.++++.+.+ +| .++.++.||+..+... . . ...-+.+.+.++.+
T Consensus 134 ~l-----------~~~~d~v~~~~~~e~~~~~~-~g--~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~G 199 (385)
T TIGR00215 134 KI-----------EKATDFLLAILPFEKAFYQK-KN--VPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPG 199 (385)
T ss_pred HH-----------HHHHhHhhccCCCcHHHHHh-cC--CCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECC
Confidence 11 24589999999999999875 34 5788899998422111 0 0 00111124566555
Q ss_pred cCCcc-ccChhhhhccchhHhhhccc
Q 021684 276 AQFRP-EKVRYKLISTSCLEEIRCRL 300 (309)
Q Consensus 276 GRl~p-~Kn~~~lI~A~~f~~l~~~~ 300 (309)
||..+ +|.++.+++| ++.+.++.
T Consensus 200 SR~aei~k~~~~ll~a--~~~l~~~~ 223 (385)
T TIGR00215 200 SRGSEVEKLFPLFLKA--AQLLEQQE 223 (385)
T ss_pred CCHHHHHHhHHHHHHH--HHHHHHhC
Confidence 49887 8999999999 98886553
No 81
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=97.34 E-value=0.00033 Score=69.32 Aligned_cols=55 Identities=16% Similarity=0.104 Sum_probs=41.9
Q ss_pred CCceEecCCCCCCCCcccCCC------------CCCCCcEEEEEcCCccccChhhhhccchhHhhhccc
Q 021684 244 DRIKRVYPPCDTSGLQVLPLE------------RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRL 300 (309)
Q Consensus 244 ~~~~VIYPPVd~~~~~~~~~~------------~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~ 300 (309)
.++.|++++||++.|.....+ ....++.+++|||++++|+++.+|+| |+.+.++.
T Consensus 227 ~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A--~~~ll~~~ 293 (460)
T cd03788 227 VRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLA--FERLLERY 293 (460)
T ss_pred EEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHH--HHHHHHhC
Confidence 467899999998887531100 01235789999999999999999999 99886654
No 82
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.21 E-value=0.0004 Score=66.53 Aligned_cols=86 Identities=13% Similarity=-0.061 Sum_probs=62.2
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCC-------CCCCCcEEEEEcCCccccChhhh
Q 021684 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAIISVAQFRPEKVRYKL 287 (309)
Q Consensus 215 ~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~-------~~~~~~~iLsVGRl~p~Kn~~~l 287 (309)
.+...++||.|++.|+..++.+++. + .++.+|+|.||.+.|...... ...+++.++++|++.+.++++++
T Consensus 147 e~~~~~~ad~vi~~S~~l~~~~~~~-~--~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ll 223 (373)
T cd04950 147 ERRLLKRADLVFTTSPSLYEAKRRL-N--PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLELL 223 (373)
T ss_pred HHHHHHhCCEEEECCHHHHHHHhhC-C--CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHHHH
Confidence 4556688999999999999988775 4 789999999998877532111 11235789999999998888876
Q ss_pred hccchhHhhhcccCCCCCccCC
Q 021684 288 ISTSCLEEIRCRLASAQTPICG 309 (309)
Q Consensus 288 I~A~~f~~l~~~~~~~~~~~~~ 309 (309)
.++ +. ...+-+++++|
T Consensus 224 ~~l---a~---~~p~~~~vliG 239 (373)
T cd04950 224 EAL---AK---ARPDWSFVLIG 239 (373)
T ss_pred HHH---HH---HCCCCEEEEEC
Confidence 654 22 22444666665
No 83
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.65 E-value=0.0047 Score=58.84 Aligned_cols=81 Identities=11% Similarity=0.055 Sum_probs=47.8
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcc-----c--CCCCCCCCcEEEE-Ec-CCccccC-hhhhhc
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-----L--PLERSTEYPAIIS-VA-QFRPEKV-RYKLIS 289 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~-----~--~~~~~~~~~~iLs-VG-Rl~p~Kn-~~~lI~ 289 (309)
+.+|.+++.|+.+++.+.+. | .++.++-+|+....... . ...-+...+.++. .| |....|. .+.+++
T Consensus 133 ~~~d~i~~~~~~~~~~~~~~-g--~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~ 209 (380)
T PRK00025 133 KATDHVLALFPFEAAFYDKL-G--VPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLK 209 (380)
T ss_pred HHHhhheeCCccCHHHHHhc-C--CCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHH
Confidence 45799999999999998764 4 45777777774321110 0 0011112344443 33 6666554 689999
Q ss_pred cchhHhhhcccCCCCC
Q 021684 290 TSCLEEIRCRLASAQT 305 (309)
Q Consensus 290 A~~f~~l~~~~~~~~~ 305 (309)
| ++.+.++..+.+.
T Consensus 210 a--~~~l~~~~~~~~~ 223 (380)
T PRK00025 210 A--AQLLQQRYPDLRF 223 (380)
T ss_pred H--HHHHHHhCCCeEE
Confidence 9 8888655333343
No 84
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=96.64 E-value=0.0075 Score=59.77 Aligned_cols=54 Identities=13% Similarity=-0.007 Sum_probs=41.1
Q ss_pred CCceEecCCCCCCCCcccCCCC------------CCCCcEEEEEcCCccccChhhhhccchhHhhhcc
Q 021684 244 DRIKRVYPPCDTSGLQVLPLER------------STEYPAIISVAQFRPEKVRYKLISTSCLEEIRCR 299 (309)
Q Consensus 244 ~~~~VIYPPVd~~~~~~~~~~~------------~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~ 299 (309)
.++.|++++||++.|....... -...+.+++||||++.|+++.+++| |+.+.++
T Consensus 222 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A--~~~ll~~ 287 (456)
T TIGR02400 222 VRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLA--FERFLEE 287 (456)
T ss_pred EEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHH--HHHHHHh
Confidence 4678999999999885311000 0135689999999999999999999 9998654
No 85
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=96.53 E-value=0.062 Score=43.35 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhhhHHHHhHHH
Q 021684 51 ERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVY 130 (309)
Q Consensus 51 ErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~~l~~~~ 130 (309)
+-.+.++++.|.+.| +++.+.+...+ .+.. ...+++++..+.... . . ....+. +.
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~--~~~~----------~~~~~i~~~~~~~~~-----k-~----~~~~~~-~~ 64 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRND--YEKY----------EIIEGIKVIRLPSPR-----K-S----PLNYIK-YF 64 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCC--chhh----------hHhCCeEEEEecCCC-----C-c----cHHHHH-HH
Confidence 457889999999887 66677776431 1100 112223344442110 0 0 112222 22
Q ss_pred HHHHHHhccCCcEEEeCCCCc-cccc-ee-eecC-CeEEEEeecC
Q 021684 131 LSWEALCKFTPLYYFDTSGYA-FTYP-LA-RIFG-CRVICYTHYP 171 (309)
Q Consensus 131 ~~~~~l~~~~pdv~iss~~~a-~~~p-~a-~~~~-~~~i~Y~H~P 171 (309)
...+.+++.+||+++...... ...+ ++ ++.+ .|.+...|..
T Consensus 65 ~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 65 RLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGS 109 (139)
T ss_pred HHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCC
Confidence 345668888999988665433 2223 33 3456 7888888865
No 86
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=96.46 E-value=0.011 Score=55.72 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=53.1
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCC-CCCCCcc--c--C-----CCCCCCCcEEEEEcCCcc---ccChh
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQV--L--P-----LERSTEYPAIISVAQFRP---EKVRY 285 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPV-d~~~~~~--~--~-----~~~~~~~~~iLsVGRl~p---~Kn~~ 285 (309)
+.+|.+++.|+..++.+.+. |. ++++.|+.||+ |...+.. . . ...+.++.++++.||... +|+++
T Consensus 140 ~~ad~~~~~s~~~~~~l~~~-G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~ 218 (363)
T cd03786 140 KLSDLHFAPTEEARRNLLQE-GEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLE 218 (363)
T ss_pred HHhhhccCCCHHHHHHHHHc-CCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHH
Confidence 45799999999999999875 55 67789999996 3221110 0 0 001112335668999875 79999
Q ss_pred hhhccchhHhhhcc
Q 021684 286 KLISTSCLEEIRCR 299 (309)
Q Consensus 286 ~lI~A~~f~~l~~~ 299 (309)
.+++| ++.+.++
T Consensus 219 ~l~~a--l~~l~~~ 230 (363)
T cd03786 219 EILEA--LAELAEE 230 (363)
T ss_pred HHHHH--HHHHHhc
Confidence 99999 9888543
No 87
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=96.45 E-value=0.054 Score=51.43 Aligned_cols=84 Identities=13% Similarity=0.060 Sum_probs=54.8
Q ss_pred CCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCC-CCCCCc-c------cCCCCCCCCcEEEEEc-CC-ccccChhhhhc
Q 021684 221 CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQ-V------LPLERSTEYPAIISVA-QF-RPEKVRYKLIS 289 (309)
Q Consensus 221 ~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPV-d~~~~~-~------~~~~~~~~~~~iLsVG-Rl-~p~Kn~~~lI~ 289 (309)
.+|.+++.|+..++++.+. |. ++++.|++||+ |..... . .......++++++..+ |. ...|+++.+++
T Consensus 141 ~ad~~~~~s~~~~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~ 219 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFK 219 (365)
T ss_pred HHHhccCCCHHHHHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHH
Confidence 3799999999999999885 66 66899999997 321110 0 0000111235666555 54 35699999999
Q ss_pred cchhHhhhcccCCCCCcc
Q 021684 290 TSCLEEIRCRLASAQTPI 307 (309)
Q Consensus 290 A~~f~~l~~~~~~~~~~~ 307 (309)
| ++.+.++..+.+.++
T Consensus 220 a--~~~l~~~~~~~~~vi 235 (365)
T TIGR00236 220 A--IREIVEEFEDVQIVY 235 (365)
T ss_pred H--HHHHHHHCCCCEEEE
Confidence 9 998865543444443
No 88
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=95.95 E-value=0.017 Score=51.65 Aligned_cols=86 Identities=22% Similarity=0.194 Sum_probs=64.2
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcc--cCCCCCCCCcEEEEEcCCccccChhhhhccchhHhhhc
Q 021684 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV--LPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRC 298 (309)
Q Consensus 221 ~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~--~~~~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~ 298 (309)
..+.+++.|....+.++..+. ..+..+++++++.+.+.. ..........+++++||+.+.|+++.+++| ++.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~--~~~~~~ 226 (381)
T COG0438 150 LADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEA--AAKLKK 226 (381)
T ss_pred cccEEEECCHHHHHHHHHhCC-CCCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHHH--HHHhhh
Confidence 589999999999888877775 236888999999887753 111111112689999999999999999999 999987
Q ss_pred ccCCCCCccCC
Q 021684 299 RLASAQTPICG 309 (309)
Q Consensus 299 ~~~~~~~~~~~ 309 (309)
+..+..+.++|
T Consensus 227 ~~~~~~~~~~g 237 (381)
T COG0438 227 RGPDIKLVIVG 237 (381)
T ss_pred hcCCeEEEEEc
Confidence 75544444443
No 89
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=95.94 E-value=0.14 Score=43.56 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=24.1
Q ss_pred CCcEEEEcCHHHHHHHHHHh-------CC----------CCCceEecCCC
Q 021684 221 CADLAMVNSSWTQSHIEKLW-------GI----------PDRIKRVYPPC 253 (309)
Q Consensus 221 ~ad~vIaNS~~t~~~i~~~~-------~~----------~~~~~VIYPPV 253 (309)
-||.|+-||+|-++.+-+-- +. ..+..|+|||+
T Consensus 119 aAD~v~FNS~~nr~sFL~~~~~fL~~~PD~~p~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 119 AADRVVFNSAFNRDSFLDGIPSFLKRMPDHRPKGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hceeeeecchhhHHHHHHHHHHHHHHCCCCCchhHHHHHhccCeecCCCC
Confidence 49999999999887654322 21 46888998885
No 90
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=95.65 E-value=0.21 Score=47.78 Aligned_cols=47 Identities=13% Similarity=0.136 Sum_probs=29.8
Q ss_pred HHHhHHHHHHHHHhccCCcEEEeCCCCccccc-e-eeecCCeEEEEeec
Q 021684 124 QSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHY 170 (309)
Q Consensus 124 ~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~-a~~~~~~~i~Y~H~ 170 (309)
..+.....+.+.+++.+||+++++.+++...+ + +++.+.|++.+..+
T Consensus 75 ~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n 123 (352)
T PRK12446 75 LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESD 123 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCC
Confidence 33334455566788999999999887653333 2 34667777554433
No 91
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=95.58 E-value=0.036 Score=58.71 Aligned_cols=56 Identities=11% Similarity=-0.124 Sum_probs=42.0
Q ss_pred CCCceEecCCCCCCCCcccCCC------------CCCCCcEEEEEcCCccccChhhhhccchhHhhhccc
Q 021684 243 PDRIKRVYPPCDTSGLQVLPLE------------RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRL 300 (309)
Q Consensus 243 ~~~~~VIYPPVd~~~~~~~~~~------------~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~ 300 (309)
..++.|+++.||++.|...... .....+++|+|||+++.|+++.+|+| |+.+.++.
T Consensus 241 ~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~A--fe~lL~~~ 308 (797)
T PLN03063 241 VTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLA--FEKFLEEN 308 (797)
T ss_pred EEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHH--HHHHHHhC
Confidence 3568899999998877521100 01135799999999999999999999 99986553
No 92
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=95.55 E-value=0.039 Score=53.60 Aligned_cols=223 Identities=15% Similarity=0.089 Sum_probs=114.7
Q ss_pred CCCCChHhHHHHHHHHHHHHhCCCCeEEE--EeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhh
Q 021684 44 TNDGGGGERVLWCAVKAIQEESPDLDCIV--YTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTM 121 (309)
Q Consensus 44 l~~gGGaErV~~~la~aL~~~~~~~~~~i--~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l 121 (309)
+.+|-|-.-..+.++++|.++.|+.++.. |.+.+ +.+-.+.-...| .+..+..+.+........+.-
T Consensus 3 ~snghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~----~~~e~~~ip~~g-------~~~~~~sgg~~~~~~~~~~~~ 71 (396)
T TIGR03492 3 LSNGHGEDLIAARIAKALLQLSPDLNLEALPLVGEG----RAYQNLGIPIIG-------PTKELPSGGFSYQSLRGLLRD 71 (396)
T ss_pred CCCCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCC----HHHhhCCCceeC-------CCCCCCCCCccCCCHHHHHHH
Confidence 34777888899999999999877777551 33322 111111100011 111121222221111122223
Q ss_pred hHH-HHhHHHHHHHHHhcc--CCcEEEeCCCCccccce--eeecCCeEEEE-eecCCcchHHHHhhhhcccccCchhhhh
Q 021684 122 IGQ-SFGSVYLSWEALCKF--TPLYYFDTSGYAFTYPL--ARIFGCRVICY-THYPTISLDMISRVREGSSMYNNNASIA 195 (309)
Q Consensus 122 ~~~-~l~~~~~~~~~l~~~--~pdv~iss~~~a~~~p~--a~~~~~~~i~Y-~H~P~~s~~~~~~~~~~~~~~~~~~y~~ 195 (309)
+.+ .+.....+++.+++. +||+++.+.++. |+ |++.+.|.+.+ +|... ++|.....+...++..
T Consensus 72 ~~~gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v---~~~aA~~~~~p~~~~~~~esn-------~~~~~~~~~~~~~~~~ 141 (396)
T TIGR03492 72 LRAGLVGLTLGQWRALRKWAKKGDLIVAVGDIV---PLLFAWLSGKPYAFVGTAKSD-------YYWESGPRRSPSDEYH 141 (396)
T ss_pred HHhhHHHHHHHHHHHHHHHhhcCCEEEEECcHH---HHHHHHHcCCCceEEEeeccc-------eeecCCCCCccchhhh
Confidence 444 334445556667777 999999998865 53 56778888776 67653 1111111111111000
Q ss_pred hcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCcccCCCCCCCCcEEEEE
Q 021684 196 QSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISV 275 (309)
Q Consensus 196 ~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsV 275 (309)
+. . ...|.. + --.+...+.||.|.+.-+.+++.+.+. | .++.++=||+-.+-.......-....+.++.+
T Consensus 142 ~~--~---G~~~~p-~-e~n~l~~~~a~~v~~~~~~t~~~l~~~-g--~k~~~vGnPv~d~l~~~~~~~l~~~~~~lllL 211 (396)
T TIGR03492 142 RL--E---GSLYLP-W-ERWLMRSRRCLAVFVRDRLTARDLRRQ-G--VRASYLGNPMMDGLEPPERKPLLTGRFRIALL 211 (396)
T ss_pred cc--C---CCccCH-H-HHHHhhchhhCEEeCCCHHHHHHHHHC-C--CeEEEeCcCHHhcCccccccccCCCCCEEEEE
Confidence 00 0 001100 0 012344578999999999999999764 4 68889999984332211000101112333333
Q ss_pred --cC-CccccChhhhhccchhHhhhcc
Q 021684 276 --AQ-FRPEKVRYKLISTSCLEEIRCR 299 (309)
Q Consensus 276 --GR-l~p~Kn~~~lI~A~~f~~l~~~ 299 (309)
+| =+-.++++.+++| .+.+.++
T Consensus 212 pGSR~ae~~~~lp~~l~a--l~~L~~~ 236 (396)
T TIGR03492 212 PGSRPPEAYRNLKLLLRA--LEALPDS 236 (396)
T ss_pred CCCCHHHHHccHHHHHHH--HHHHhhC
Confidence 33 2344677889998 8888543
No 93
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=94.91 E-value=0.6 Score=40.14 Aligned_cols=102 Identities=16% Similarity=0.208 Sum_probs=64.5
Q ss_pred cCCcEEEeCCCCccccceee-ecCCeEEEEeec---CCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHH
Q 021684 139 FTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHY---PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (309)
Q Consensus 139 ~~pdv~iss~~~a~~~p~a~-~~~~~~i~Y~H~---P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~ 214 (309)
..||+++...|+...+-+.- ..++|.++||-+ +. ..| ..+| +... ......+ -.+.....
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~-g~d---------~~FD--pe~p-~~~~~~~---~~r~rN~~ 128 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRAS-GAD---------VGFD--PEFP-PSLDDRA---RLRMRNAH 128 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCC-CCc---------CCCC--CCCC-CCHHHHH---HHHHHhHH
Confidence 56899999988776655543 578999999744 32 111 1122 1110 0011111 11111222
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCC
Q 021684 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (309)
Q Consensus 215 ~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~ 258 (309)
.-.....||..++-++|=++.+=..|. .+++||+=.||++.+
T Consensus 129 ~l~~l~~~D~~isPT~wQ~~~fP~~~r--~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 129 NLLALEQADAGISPTRWQRSQFPAEFR--SKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHHhCCcCcCCCHHHHHhCCHHHH--cCcEEeecccchhhc
Confidence 223446799999999999999999996 999999999998765
No 94
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=94.76 E-value=0.067 Score=56.10 Aligned_cols=55 Identities=11% Similarity=0.009 Sum_probs=41.6
Q ss_pred CCceEecCCCCCCCCcccCC------------CCCCCCcEEEEEcCCccccChhhhhccchhHhhhccc
Q 021684 244 DRIKRVYPPCDTSGLQVLPL------------ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRL 300 (309)
Q Consensus 244 ~~~~VIYPPVd~~~~~~~~~------------~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~ 300 (309)
.++.|+++.||++.|..... ......+.+++|||++++|+++.+|+| |+.+.++.
T Consensus 228 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A--~~~ll~~~ 294 (726)
T PRK14501 228 VRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLA--FERFLEKN 294 (726)
T ss_pred EEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHH--HHHHHHhC
Confidence 36899999999988853110 011235699999999999999999999 99875543
No 95
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=92.11 E-value=0.89 Score=43.68 Aligned_cols=45 Identities=24% Similarity=0.267 Sum_probs=29.4
Q ss_pred hHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc-ee-eecCCeEEE
Q 021684 122 IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFGCRVIC 166 (309)
Q Consensus 122 ~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p-~a-~~~~~~~i~ 166 (309)
++..+..+..+.+.+++.+||+++++.++...-+ ++ +..+.|++.
T Consensus 73 ~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~i 119 (357)
T COG0707 73 PFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVII 119 (357)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEE
Confidence 3444444555667789999999999988664444 33 345666544
No 96
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=91.48 E-value=3.2 Score=41.57 Aligned_cols=150 Identities=13% Similarity=0.038 Sum_probs=85.1
Q ss_pred cCCcEEEeCCCCccccce--ee----ecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHH---
Q 021684 139 FTPLYYFDTSGYAFTYPL--AR----IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT--- 209 (309)
Q Consensus 139 ~~pdv~iss~~~a~~~p~--a~----~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~--- 209 (309)
..||+++...+++..+|. +. ....|.|.-+|+-... . .+. .++.... +.-.-.|..
T Consensus 129 ~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~q---------G--~~~-~~~~~~l---gLp~~~~~~~~l 193 (487)
T COG0297 129 WLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQ---------G--LFR-LQYLEEL---GLPFEAYASFGL 193 (487)
T ss_pred CCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceee---------c--ccc-hhhHHHh---cCCHHHhhhcee
Confidence 369999998887766663 22 2257778889975410 0 011 1111110 000011110
Q ss_pred ---HHHHHHHHhcCCCcEEEEcCHHHHHHHH-HHhC-----C----CCCceEecCCCCCCCCcc--------------cC
Q 021684 210 ---FFSWMYGLVGSCADLAMVNSSWTQSHIE-KLWG-----I----PDRIKRVYPPCDTSGLQV--------------LP 262 (309)
Q Consensus 210 ---~~~~~~~~~~~~ad~vIaNS~~t~~~i~-~~~~-----~----~~~~~VIYPPVd~~~~~~--------------~~ 262 (309)
--..+.+.....||.|.++|..=+++|. ..|| + ..+..-|.|.+|.+-... .+
T Consensus 194 ~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~ 273 (487)
T COG0297 194 EFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP 273 (487)
T ss_pred eecCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh
Confidence 0001223345689999999999999998 2222 1 345566667665442210 00
Q ss_pred --------------CCCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCcc
Q 021684 263 --------------LERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPI 307 (309)
Q Consensus 263 --------------~~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~ 307 (309)
.+.+.+.+++.+||||..||.+|++++| ...+-++. .|+++
T Consensus 274 ~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~--i~~~l~~~--~~~vi 328 (487)
T COG0297 274 AKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEA--IDELLEQG--WQLVL 328 (487)
T ss_pred hhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHH--HHHHHHhC--ceEEE
Confidence 0112346899999999999999999999 77665443 45544
No 97
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=91.46 E-value=0.62 Score=43.90 Aligned_cols=64 Identities=14% Similarity=0.010 Sum_probs=38.9
Q ss_pred HHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccc
Q 021684 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPE 281 (309)
Q Consensus 215 ~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~ 281 (309)
..+.++++|.+|+.|+.+++.+++. |. ..++.++ |..+...... .......+..++++||+.+.
T Consensus 117 ~~~~~~~aD~iI~~S~~~~~~l~~~-g~~~~~i~~~-~~~~~~~~~~-~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 117 EIDMLNLADVLIVHSKKMKDRLVEE-GLTTDKIIVQ-GIFDYLNDIE-LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCCcCceEec-cccccccccc-ccccccCCceEEEecChhhc
Confidence 3444578999999999999999875 54 3344443 3333211111 11111235689999999943
No 98
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=91.29 E-value=5.3 Score=39.02 Aligned_cols=190 Identities=17% Similarity=0.140 Sum_probs=97.2
Q ss_pred hHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhhhHHHHhH
Q 021684 49 GGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGS 128 (309)
Q Consensus 49 GaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~~l~~ 128 (309)
|--+.+.-++++|.+++|+..+++ |+..++. . +.+++.|+.. +.+..+ |. - .
T Consensus 60 GEv~a~~pLv~~l~~~~P~~~ilv-Tt~T~Tg-~---e~a~~~~~~~----v~h~Yl-----------P~-D-------~ 111 (419)
T COG1519 60 GEVLAALPLVRALRERFPDLRILV-TTMTPTG-A---ERAAALFGDS----VIHQYL-----------PL-D-------L 111 (419)
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EecCccH-H---HHHHHHcCCC----eEEEec-----------Cc-C-------c
Confidence 566788889999999999998654 4433222 1 3344444421 222222 10 0 0
Q ss_pred HHHHHHHHhccCCc--EEEeCCCCccccceeeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHH
Q 021684 129 VYLSWEALCKFTPL--YYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (309)
Q Consensus 129 ~~~~~~~l~~~~pd--v~iss~~~a~~~p~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~ 206 (309)
-....+-++..+|| +++.+--|.|.+--++..+.|.+.-- -- +|.+ + |. .+.+++++
T Consensus 112 ~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvN-aR-LS~r---S-------~~---------~y~k~~~~ 170 (419)
T COG1519 112 PIAVRRFLRKWRPKLLIIMETELWPNLINELKRRGIPLVLVN-AR-LSDR---S-------FA---------RYAKLKFL 170 (419)
T ss_pred hHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHcCCCEEEEe-ee-echh---h-------hH---------HHHHHHHH
Confidence 11223446678999 44444445544432223355554421 11 1211 1 00 02223333
Q ss_pred HHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEec--------CCCCCCCCcccCCCCCCCCcEEEEEcCC
Q 021684 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY--------PPCDTSGLQVLPLERSTEYPAIISVAQF 278 (309)
Q Consensus 207 y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIY--------PPVd~~~~~~~~~~~~~~~~~iLsVGRl 278 (309)
+..+ .+..|.|+|.|+--++++.++-- .+++|.= ||++..........-+...++++..|..
T Consensus 171 ~~~~--------~~~i~li~aQse~D~~Rf~~LGa--~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH 240 (419)
T COG1519 171 ARLL--------FKNIDLILAQSEEDAQRFRSLGA--KPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTH 240 (419)
T ss_pred HHHH--------HHhcceeeecCHHHHHHHHhcCC--cceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCC
Confidence 3333 36789999999999999988864 3333321 1211110000000001115899999983
Q ss_pred ccccChhhhhccchhHhhhcccC
Q 021684 279 RPEKVRYKLISTSCLEEIRCRLA 301 (309)
Q Consensus 279 ~p~Kn~~~lI~A~~f~~l~~~~~ 301 (309)
+..-+.+++| ++.+.++..
T Consensus 241 --~GEeei~l~~--~~~l~~~~~ 259 (419)
T COG1519 241 --EGEEEIILDA--HQALKKQFP 259 (419)
T ss_pred --CchHHHHHHH--HHHHHhhCC
Confidence 3445668888 988877643
No 99
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=91.01 E-value=0.14 Score=52.03 Aligned_cols=91 Identities=15% Similarity=0.106 Sum_probs=59.0
Q ss_pred HHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCc-eEecCCCCCCCCcccC------------C-------CC------CC
Q 021684 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRI-KRVYPPCDTSGLQVLP------------L-------ER------ST 267 (309)
Q Consensus 214 ~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~-~VIYPPVd~~~~~~~~------------~-------~~------~~ 267 (309)
+.+.++..||.+-++|+-|+.+-+.+++ +++ .|++|..+++.+.... . .. .+
T Consensus 214 iEraaA~~AdvFTTVSeITa~Ea~~LL~--r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d 291 (633)
T PF05693_consen 214 IERAAAHYADVFTTVSEITAKEAEHLLK--RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLD 291 (633)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHHHS--S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GG
T ss_pred HHHHHHHhcCeeeehhhhHHHHHHHHhC--CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence 3556678999999999999999999997 555 7888998877654210 0 00 01
Q ss_pred CCcEEEEEcCCc-cccChhhhhccchhHhhhccc---CCCCCccC
Q 021684 268 EYPAIISVAQFR-PEKVRYKLISTSCLEEIRCRL---ASAQTPIC 308 (309)
Q Consensus 268 ~~~~iLsVGRl~-p~Kn~~~lI~A~~f~~l~~~~---~~~~~~~~ 308 (309)
+.=++.+.||++ ..|.+|..||| .++|...+ .++.+|+|
T Consensus 292 ~tl~~ftsGRYEf~NKG~D~fieA--L~rLn~~lk~~~~~~tVVa 334 (633)
T PF05693_consen 292 KTLYFFTSGRYEFRNKGIDVFIEA--LARLNHRLKQAGSDKTVVA 334 (633)
T ss_dssp GEEEEEEESSS-TTTTTHHHHHHH--HHHHHHHHHHTT-S-EEEE
T ss_pred ceEEEEeeeceeeecCCccHHHHH--HHHHHHHHhhcCCCCeEEE
Confidence 233677999999 66999999999 99997654 33455554
No 100
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=89.14 E-value=6.1 Score=35.65 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=24.8
Q ss_pred CCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccC
Q 021684 42 PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (309)
Q Consensus 42 p~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~ 77 (309)
|+. .-||-.-|+-.|+++|++.| +++.+.+..+
T Consensus 11 P~~-k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y 43 (245)
T PF08323_consen 11 PFA-KVGGLGDVVGSLPKALAKQG--HDVRVIMPKY 43 (245)
T ss_dssp TTB--SSHHHHHHHHHHHHHHHTT---EEEEEEE-T
T ss_pred ccc-ccCcHhHHHHHHHHHHHhcC--CeEEEEEccc
Confidence 444 56899999999999999998 6667777654
No 101
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=88.76 E-value=4 Score=38.90 Aligned_cols=100 Identities=12% Similarity=0.197 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecccCCchhhhHHHHhHHHH
Q 021684 52 RVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYL 131 (309)
Q Consensus 52 rV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~~~~~~l~~~~l~~~~~ 131 (309)
.++-.+++.|.++| +++.+.+-+. +...+.+ +.+|++ ...++... . .....+.........
T Consensus 14 hfFk~~I~eL~~~G--heV~it~R~~----~~~~~LL-~~yg~~------y~~iG~~g---~---~~~~Kl~~~~~R~~~ 74 (335)
T PF04007_consen 14 HFFKNIIRELEKRG--HEVLITARDK----DETEELL-DLYGID------YIVIGKHG---D---SLYGKLLESIERQYK 74 (335)
T ss_pred HHHHHHHHHHHhCC--CEEEEEEecc----chHHHHH-HHcCCC------eEEEcCCC---C---CHHHHHHHHHHHHHH
Confidence 56778899999887 5545544433 2333333 345542 23332211 0 111112223333444
Q ss_pred HHHHHhccCCcEEEeCCCCccccc-eeeecCCeEEEEeecCC
Q 021684 132 SWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPT 172 (309)
Q Consensus 132 ~~~~l~~~~pdv~iss~~~a~~~p-~a~~~~~~~i~Y~H~P~ 172 (309)
+.+.+++.+||++++..+ ...+ +++..|.|+|.++.++.
T Consensus 75 l~~~~~~~~pDv~is~~s--~~a~~va~~lgiP~I~f~D~e~ 114 (335)
T PF04007_consen 75 LLKLIKKFKPDVAISFGS--PEAARVAFGLGIPSIVFNDTEH 114 (335)
T ss_pred HHHHHHhhCCCEEEecCc--HHHHHHHHHhCCCeEEEecCch
Confidence 566677889999997654 2223 45567899999998875
No 102
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=87.55 E-value=17 Score=31.05 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=28.8
Q ss_pred hHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce---eeec------CCeEEE
Q 021684 122 IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIF------GCRVIC 166 (309)
Q Consensus 122 ~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~---a~~~------~~~~i~ 166 (309)
++..+.....+++.+.+.+||+++++.. +..+|+ +++. +.++|.
T Consensus 74 ~~~~l~~~~~~~~il~r~rPdvii~nGp-g~~vp~~~~~~l~~~~~~~~~kiIy 126 (170)
T PF08660_consen 74 IFTTLRAFLQSLRILRRERPDVIISNGP-GTCVPVCLAAKLLRLLGLRGSKIIY 126 (170)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEcCC-ceeeHHHHHHHHHHHhhccCCcEEE
Confidence 4444445556677778889999998855 666773 3444 666654
No 103
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=85.20 E-value=0.87 Score=45.96 Aligned_cols=79 Identities=19% Similarity=0.164 Sum_probs=54.3
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCC-C--CCceEecCCCCCCCCcccCCCCCCCCcEEEEEc--CCccccChhhhhccchhH
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGI-P--DRIKRVYPPCDTSGLQVLPLERSTEYPAIISVA--QFRPEKVRYKLISTSCLE 294 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~-~--~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVG--Rl~p~Kn~~~lI~A~~f~ 294 (309)
.++|.+|+-++..++++++.++- + .++.+| ||-++... .+.+.+ ...-+++++ || |+|..+.+|+| +.
T Consensus 271 ~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~I-p~~~~~~~--~~~s~r-~~~~~I~v~idrL-~ek~~~~~I~a--v~ 343 (519)
T TIGR03713 271 SRADLIIVDREDIERLLEENYRENYVEFDISRI-TPFDTRLR--LGQSQQ-LYETEIGFWIDGL-SDEELQQILQQ--LL 343 (519)
T ss_pred hhcCeEEEcCHHHHHHHHHHhhhcccCCcceee-CccceEEe--cChhhc-ccceEEEEEcCCC-ChHHHHHHHHH--HH
Confidence 56899999998989999988861 0 122333 55565222 122222 356788889 99 99999999999 99
Q ss_pred hhhcccCCCCC
Q 021684 295 EIRCRLASAQT 305 (309)
Q Consensus 295 ~l~~~~~~~~~ 305 (309)
.+..+..+.++
T Consensus 344 ~~~~~~p~~~L 354 (519)
T TIGR03713 344 QYILKNPDYEL 354 (519)
T ss_pred HHHhhCCCeEE
Confidence 88776555544
No 104
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=84.81 E-value=3.2 Score=41.56 Aligned_cols=54 Identities=11% Similarity=0.042 Sum_probs=40.4
Q ss_pred CceEecCCCCCCCCcccCCC-----------CC-CCCcEEEEEcCCccccChhhhhccchhHhhhccc
Q 021684 245 RIKRVYPPCDTSGLQVLPLE-----------RS-TEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRL 300 (309)
Q Consensus 245 ~~~VIYPPVd~~~~~~~~~~-----------~~-~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~ 300 (309)
.+.+++..||++.|...... +. ...+.+++|+|+++.|+++..++| |.++-++.
T Consensus 249 ~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~A--fe~~L~~~ 314 (487)
T TIGR02398 249 KLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNA--YERLLERR 314 (487)
T ss_pred EEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHH--HHHHHHhC
Confidence 46788888888888532100 00 135799999999999999999999 99985553
No 105
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=82.91 E-value=3.3 Score=35.02 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=28.0
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCC
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC 253 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPV 253 (309)
+.+|..++-|+.+++++.+ .|+ ++++.|.=.||
T Consensus 136 ~~~D~y~Vase~~~~~l~~-~Gi~~~~I~vtGiPV 169 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE-RGIPPERIHVTGIPV 169 (169)
T ss_pred CCCCEEEECCHHHHHHHHH-cCCChhHEEEeCccC
Confidence 6799999999999999999 676 67787776664
No 106
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=82.65 E-value=48 Score=31.99 Aligned_cols=222 Identities=14% Similarity=0.202 Sum_probs=118.1
Q ss_pred cCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccc
Q 021684 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (309)
Q Consensus 30 ~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~ 109 (309)
+..++.-++++.-+. |-+-|.. .=|..|++.|-++++.=|.... +. +++- . ++.++++++..-.
T Consensus 9 ~~~k~ra~vvVLGDv---GRSPRMq-YHA~Sla~~gf~VdliGy~~s~--p~----e~l~-----~-hprI~ih~m~~l~ 72 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGDV---GRSPRMQ-YHALSLAKLGFQVDLIGYVESI--PL----EELL-----N-HPRIRIHGMPNLP 72 (444)
T ss_pred ccccceEEEEEeccc---CCChHHH-HHHHHHHHcCCeEEEEEecCCC--Ch----HHHh-----c-CCceEEEeCCCCc
Confidence 334444455665555 5566655 4566788888666655554322 11 1111 1 2333444443222
Q ss_pred eee---cccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccce---ee----ecCCeEEEEeecCCcchHHHH
Q 021684 110 WIE---ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---AR----IFGCRVICYTHYPTISLDMIS 179 (309)
Q Consensus 110 ~~~---~~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~---a~----~~~~~~i~Y~H~P~~s~~~~~ 179 (309)
... +..+..+..+||.+.....++. ...+|+++-... -.+|. +. +.+++.++--|+-.-| -.+.
T Consensus 73 ~~~~~p~~~~l~lKvf~Qfl~Ll~aL~~---~~~~~~ilvQNP--P~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~ 146 (444)
T KOG2941|consen 73 FLQGGPRVLFLPLKVFWQFLSLLWALFV---LRPPDIILVQNP--PSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLK 146 (444)
T ss_pred ccCCCchhhhhHHHHHHHHHHHHHHHHh---ccCCcEEEEeCC--CCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHH
Confidence 111 1112233446666544333332 456887766654 23452 22 3467777766764311 0101
Q ss_pred hhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEec--CCC---C
Q 021684 180 RVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY--PPC---D 254 (309)
Q Consensus 180 ~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIY--PPV---d 254 (309)
+ . .+.. -.+-++.++..+..++.||.=+++++..++++.+.||+ .+..|+| ||- +
T Consensus 147 -~-------~----~g~~-------h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi-~ra~v~YDrPps~~~~ 206 (444)
T KOG2941|consen 147 -L-------K----LGFQ-------HPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGI-NRAKVLYDRPPSKPTP 206 (444)
T ss_pred -h-------h----cCCC-------CchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCC-ceeEEEecCCCCCCCc
Confidence 0 0 0000 01123444556677889999999999999999999995 5788888 552 1
Q ss_pred CC--------------CCcc-cCC----C---------------CCCCCcEEEEEcCCccccChhhhhccchhHh
Q 021684 255 TS--------------GLQV-LPL----E---------------RSTEYPAIISVAQFRPEKVRYKLISTSCLEE 295 (309)
Q Consensus 255 ~~--------------~~~~-~~~----~---------------~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~ 295 (309)
.+ .|.+ ++. + ..+++..++|---..|..|+..+++| ...
T Consensus 207 l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~A--L~~ 279 (444)
T KOG2941|consen 207 LDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEA--LVI 279 (444)
T ss_pred hhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHH--HHh
Confidence 11 1110 000 0 01335567788889999999999999 653
No 107
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=81.46 E-value=15 Score=31.82 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=25.0
Q ss_pred HHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEec
Q 021684 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY 250 (309)
Q Consensus 214 ~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIY 250 (309)
+++...+.-|.|+|.|+..++++++....++++.|.-
T Consensus 142 ~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v~G 178 (186)
T PF04413_consen 142 LFRPLLSRFDRILAQSEADAERFRKLGAPPERVHVTG 178 (186)
T ss_dssp HHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE--
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEEeC
Confidence 3555568889999999999999998875344666643
No 108
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=80.38 E-value=19 Score=34.63 Aligned_cols=46 Identities=15% Similarity=0.257 Sum_probs=36.0
Q ss_pred cCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEecc
Q 021684 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (309)
Q Consensus 30 ~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~ 76 (309)
++.+.+||.|...++.+- |==|=+..+|++|++..++.++.+.|+.
T Consensus 5 ~~~~~~Ri~~Yshd~~Gl-GHlrR~~~Ia~aLv~d~~~~~Il~IsG~ 50 (400)
T COG4671 5 EASKRPRILFYSHDLLGL-GHLRRALRIAHALVEDYLGFDILIISGG 50 (400)
T ss_pred chhccceEEEEehhhccc-hHHHHHHHHHHHHhhcccCceEEEEeCC
Confidence 456677999877777344 7777788999999999888988888764
No 109
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=80.18 E-value=9.1 Score=35.20 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~ 76 (309)
|||+|..... +.|=+-|.+ .++++| + + +++.+.+..
T Consensus 1 MkIl~~v~~~-G~GH~~R~~-~la~~L-r-g--~~v~~~~~~ 36 (318)
T PF13528_consen 1 MKILFYVQGH-GLGHASRCL-ALARAL-R-G--HEVTFITSG 36 (318)
T ss_pred CEEEEEeCCC-CcCHHHHHH-HHHHHH-c-c--CceEEEEcC
Confidence 7899998886 555666666 599999 3 5 555666643
No 110
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=67.95 E-value=20 Score=32.95 Aligned_cols=87 Identities=20% Similarity=0.184 Sum_probs=53.6
Q ss_pred CCcEEEeCCCCccccc--eee-ecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcch---hhHhHHHHHHHHHH
Q 021684 140 TPLYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNW---LSQCKIVYYTFFSW 213 (309)
Q Consensus 140 ~pdv~iss~~~a~~~p--~a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~---~~~~k~~y~~~~~~ 213 (309)
++|++++.++....++ +++ ..|.|.+.-.|.=- .++++.. +....+ ....|.++-++|..
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY--------~RER~~e------i~~a~w~~~~~~~r~~wi~~f~~ 237 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIY--------TREREIE------ILQADWIWESPYVRDLWIRFFES 237 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCcc--------HHHHHHH------HHhcccccchHHHHHHHHHHHHH
Confidence 3589998876333333 233 46899999888742 1122110 111112 24466777778877
Q ss_pred HHHHhcCCCcEEEEcCHHHHHHHHHHhC
Q 021684 214 MYGLVGSCADLAMVNSSWTQSHIEKLWG 241 (309)
Q Consensus 214 ~~~~~~~~ad~vIaNS~~t~~~i~~~~~ 241 (309)
+-+.+++.||.|++.+++.++ .+.-.|
T Consensus 238 l~~~~Y~~Ad~I~~l~~~n~~-~q~~~G 264 (268)
T PF11997_consen 238 LSRLAYRAADRITPLYEYNRE-WQIELG 264 (268)
T ss_pred HHHHHHHhhCeecccchhhHH-HHHHhC
Confidence 788889999999999998444 444444
No 111
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=63.16 E-value=20 Score=38.94 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=26.0
Q ss_pred CcEEEEEcCCccccChhhhhccchhHhhhcc
Q 021684 269 YPAIISVAQFRPEKVRYKLISTSCLEEIRCR 299 (309)
Q Consensus 269 ~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~ 299 (309)
.+++|+|+|+++.|++...++| |..+-++
T Consensus 363 ~kiIlgVDRLD~~KGI~~kL~A--fE~fL~~ 391 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQKILA--FEKFLEE 391 (934)
T ss_pred ceEEEEeeccccccCHHHHHHH--HHHHHHh
Confidence 5699999999999999999999 9986444
No 112
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=61.35 E-value=6.8 Score=31.85 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCC
Q 021684 8 IWAVITAVLASILILASHVHNARRN 32 (309)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (309)
+|+||+.++++++++.....++|.+
T Consensus 4 l~~iii~~i~l~~~~~~~~~rRR~r 28 (130)
T PF12273_consen 4 LFAIIIVAILLFLFLFYCHNRRRRR 28 (130)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444333333333333333333
No 113
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=46.41 E-value=8.3 Score=31.34 Aligned_cols=28 Identities=18% Similarity=0.425 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCcE
Q 021684 9 WAVITAVLASILILASHVHNARRNRTTS 36 (309)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r 36 (309)
|++++.++++|+|+++.....+.+|+.|
T Consensus 2 W~l~~iii~~i~l~~~~~~~~~rRR~r~ 29 (130)
T PF12273_consen 2 WVLFAIIIVAILLFLFLFYCHNRRRRRR 29 (130)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6777777777777666667887777776
No 114
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=46.25 E-value=42 Score=29.57 Aligned_cols=47 Identities=13% Similarity=0.111 Sum_probs=29.9
Q ss_pred ccCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCC-CCeEEEEec
Q 021684 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESP-DLDCIVYTG 75 (309)
Q Consensus 29 ~~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~-~~~~~i~T~ 75 (309)
...++.+||+|+.|+.+.+...+.++-.+.+.|.+.|- .-++.+..+
T Consensus 49 ~~~~~~~~V~Ivv~D~TRp~p~~~il~~ll~~L~~~Gv~~~~i~ii~A 96 (204)
T PF09861_consen 49 ELVKPGKRVAIVVDDITRPTPSDLILPALLEELEEAGVKDEDITIIIA 96 (204)
T ss_dssp HHCTT-SEEEEEEE-TTS---HHHHHHHHHHHHHT-T-TT-EEEEEEE
T ss_pred HHhCCCCeEEEEeCCCCCCCCHHHHHHHHHHHHHhcCCCccCEEEEEe
Confidence 34566789999999998988889999999999988662 234444433
No 115
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=43.58 E-value=11 Score=38.76 Aligned_cols=39 Identities=21% Similarity=0.138 Sum_probs=29.5
Q ss_pred CcEEEEEcCCccccChhhhhccchhHhhhccc----CCCCCccCC
Q 021684 269 YPAIISVAQFRPEKVRYKLISTSCLEEIRCRL----ASAQTPICG 309 (309)
Q Consensus 269 ~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~----~~~~~~~~~ 309 (309)
.+++..++||..||+.++++++ ..++.+-+ .+.|.++.|
T Consensus 389 ~~~ig~v~Rl~~yKr~dLil~~--i~~l~~i~~~~~~pvq~V~~G 431 (601)
T TIGR02094 389 VLTIGFARRFATYKRADLIFRD--LERLARILNNPERPVQIVFAG 431 (601)
T ss_pred CcEEEEEEcchhhhhHHHHHHH--HHHHHHHhhCCCCCeEEEEEE
Confidence 3588899999999999999998 88875422 345666554
No 116
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=42.80 E-value=1.2e+02 Score=28.22 Aligned_cols=27 Identities=11% Similarity=0.060 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHhCCCCeEEEEeccC
Q 021684 51 ERVLWCAVKAIQEESPDLDCIVYTGDH 77 (309)
Q Consensus 51 ErV~~~la~aL~~~~~~~~~~i~T~~~ 77 (309)
=-...-++++|.+.+|++.+.+.|...
T Consensus 13 ~vl~tp~l~~Lk~~~P~a~I~~l~~~~ 39 (344)
T TIGR02201 13 MLLTTPVISSLKKNYPDAKIDVLLYQE 39 (344)
T ss_pred eeeHHHHHHHHHHHCCCCEEEEEECcC
Confidence 334556778999999999998888643
No 117
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=42.20 E-value=2.5e+02 Score=25.19 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=26.2
Q ss_pred CCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCC
Q 021684 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (309)
Q Consensus 220 ~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~ 258 (309)
+.+|.+|+|.+++. ++....| ..+.++|+|-+.+..
T Consensus 197 ~~~~l~I~~Dsg~~-HlA~a~~--~p~i~l~g~~~~~~~ 232 (279)
T cd03789 197 ARADLVVTNDSGPM-HLAAALG--TPTVALFGPTDPART 232 (279)
T ss_pred HhCCEEEeeCCHHH-HHHHHcC--CCEEEEECCCCcccc
Confidence 56899999877554 4556666 788889988766554
No 118
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=40.20 E-value=2.4e+02 Score=26.35 Aligned_cols=39 Identities=10% Similarity=0.062 Sum_probs=28.3
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~ 76 (309)
|||.++.++- . |==-...-++++|.+.+|++++.+.+..
T Consensus 1 mrILii~~~~--i-GD~il~tP~l~~Lk~~~P~a~I~~l~~~ 39 (348)
T PRK10916 1 MKILVIGPSW--V-GDMMMSQSLYRTLKARYPQAIIDVMAPA 39 (348)
T ss_pred CcEEEEccCc--c-cHHHhHHHHHHHHHHHCCCCeEEEEech
Confidence 4677777654 2 4445555678899999999999888754
No 119
>TIGR03141 cytochro_ccmD heme exporter protein CcmD. The model for this protein family describes a small, hydrophobic, and only moderately well-conserved protein, tricky to identify accurately for all of these reasons. However, members are found as part of large operons involved in heme export across the inner membrane for assembly of c-type cytochromes in a large number of bacteria. The gray zone between the trusted cutoff (13.0) and noise cutoff (4.75) includes both low-scoring examples and false-positive matches to hydrophobic domains of longer proteins.
Probab=39.35 E-value=38 Score=22.23 Aligned_cols=12 Identities=25% Similarity=0.778 Sum_probs=9.5
Q ss_pred CCCchhHHHHHH
Q 021684 1 MAPYGILIWAVI 12 (309)
Q Consensus 1 ~~~~~~~~~~~~ 12 (309)
|-+||.-+|..-
T Consensus 1 MGgy~~yVW~sY 12 (45)
T TIGR03141 1 MGGYAFYVWLAY 12 (45)
T ss_pred CCCccHHHHHHH
Confidence 788999998653
No 120
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=38.36 E-value=2.2e+02 Score=24.02 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEE
Q 021684 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI 71 (309)
Q Consensus 34 ~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~ 71 (309)
..||.++ ||.|-++..+++.|.+.+|+.+++
T Consensus 46 ~~~v~ll-------G~~~~~~~~~~~~l~~~yp~l~i~ 76 (171)
T cd06533 46 GLRVFLL-------GAKPEVLEKAAERLRARYPGLKIV 76 (171)
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHHHCCCcEEE
Confidence 4566653 688888888888888888887643
No 121
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=37.07 E-value=2.6e+02 Score=28.08 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=60.2
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~ 114 (309)
.||+++-++| ..--.-..+..+...+.+.. .++.+|....+ +.+...++++.... +++.+.. ..
T Consensus 1 LRIGyvS~Df-~~Hpv~~l~~~ll~~hDr~r--fev~~Ys~~~~-d~~~~~~~~~~~~~-------~~~dl~~---~~-- 64 (468)
T PF13844_consen 1 LRIGYVSSDF-RNHPVGHLLQPLLENHDRSR--FEVFCYSLGPD-DGDTFRQRIRAEAD-------HFVDLSG---LS-- 64 (468)
T ss_dssp EEEEEEES-S-SSSHHHHHHHHHHHHHHHHT--EEEEEEESS----SCHHHHHHHHHSE-------EEEEEEE----T--
T ss_pred CEEEEECCcc-hhCHHHHHHHHHHHhcCccc--EEEEEEECCCC-CCcHHHHHHHHhCC-------eEEECcc---CC--
Confidence 3899999999 44477888888887776654 77788875321 11222233332211 2333310 00
Q ss_pred cCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc--eeeecCCeE-EEEeecCC
Q 021684 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRV-ICYTHYPT 172 (309)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p--~a~~~~~~~-i~Y~H~P~ 172 (309)
.-.-+.+.++..+.|+++|..||....- +.....+|+ +.|+-||.
T Consensus 65 -------------~~~~~A~~Ir~D~IDILVDL~GhT~~~R~~ifA~RpAPVQvswlGyp~ 112 (468)
T PF13844_consen 65 -------------DDAEAAQRIRADGIDILVDLSGHTAGNRLEIFALRPAPVQVSWLGYPG 112 (468)
T ss_dssp -------------TSHHHHHHHHHTT-SEEEESSTSSTSSSHHHHHT-SSSEEEEESSSSS
T ss_pred -------------cHHHHHHHHHHCCCCEEEeCCCcCCCCHhHHHhcCCcceEEEecCCCc
Confidence 0012355678889999999998765432 211123555 77777773
No 122
>PF11346 DUF3149: Protein of unknown function (DUF3149); InterPro: IPR021494 This bacterial family of proteins has no known function.
Probab=33.73 E-value=77 Score=20.69 Aligned_cols=29 Identities=10% Similarity=0.099 Sum_probs=19.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 021684 2 APYGILIWAVITAVLASILILASHVHNAR 30 (309)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (309)
.|+|++.+.||...+....-.+....++-
T Consensus 9 s~vGL~Sl~vI~~~igm~~~~~~~F~~k~ 37 (42)
T PF11346_consen 9 SDVGLMSLIVIVFTIGMGVFFIRYFIRKM 37 (42)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999998877766655555544443
No 123
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=32.32 E-value=3.9e+02 Score=25.01 Aligned_cols=42 Identities=10% Similarity=0.073 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEecc
Q 021684 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (309)
Q Consensus 32 ~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~ 76 (309)
+.++||.++.++. . |==-...-++++|.+.+|++++++.+..
T Consensus 3 ~~~~~ILii~~~~-i--GD~vl~~P~l~~Lk~~~P~a~I~~l~~~ 44 (352)
T PRK10422 3 KPFRRILIIKMRF-H--GDMLLTTPVISSLKKNYPDAKIDVLLYQ 44 (352)
T ss_pred CCCceEEEEEecc-c--CceeeHHHHHHHHHHHCCCCeEEEEecc
Confidence 4567898888754 2 4444555677899999999998888754
No 124
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=32.25 E-value=1.7e+02 Score=24.69 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEE
Q 021684 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI 71 (309)
Q Consensus 32 ~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~ 71 (309)
++..+|.++ ||.|-++..+++.|.+.+|+.+++
T Consensus 46 ~~~~~ifll-------G~~~~~~~~~~~~l~~~yP~l~iv 78 (172)
T PF03808_consen 46 QRGKRIFLL-------GGSEEVLEKAAANLRRRYPGLRIV 78 (172)
T ss_pred HcCCeEEEE-------eCCHHHHHHHHHHHHHHCCCeEEE
Confidence 334466653 788999999999999999887643
No 125
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=31.76 E-value=46 Score=19.10 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=12.3
Q ss_pred HHHHHHHHHhhhhccCC
Q 021684 16 LASILILASHVHNARRN 32 (309)
Q Consensus 16 ~~~~~~~~~~~~~~~~~ 32 (309)
.--+|-++|.+.++|.|
T Consensus 10 a~~LP~lISWIK~kr~~ 26 (26)
T PF01372_consen 10 ATGLPTLISWIKNKRQQ 26 (26)
T ss_dssp HTHHHHHHHHHHHHHH-
T ss_pred HhcChHHHHHHHHHhcC
Confidence 33578999999888754
No 126
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=31.36 E-value=1.7e+02 Score=30.32 Aligned_cols=37 Identities=22% Similarity=0.515 Sum_probs=21.5
Q ss_pred HHHHhccCCc--EEEeCCCCccccceee---ecCC--eEEEEeecCC
Q 021684 133 WEALCKFTPL--YYFDTSGYAFTYPLAR---IFGC--RVICYTHYPT 172 (309)
Q Consensus 133 ~~~l~~~~pd--v~iss~~~a~~~p~a~---~~~~--~~i~Y~H~P~ 172 (309)
.+.+...+|| ++||..+ |...+++ ..|. |++.|+ .|+
T Consensus 303 ~~~i~~~kPD~vIlID~Pg--FNlrLAK~lkk~Gi~ipviyYV-sPq 346 (608)
T PRK01021 303 YKTILKTNPRTVICIDFPD--FHFLLIKKLRKRGYKGKIVHYV-CPS 346 (608)
T ss_pred HHHHHhcCCCEEEEeCCCC--CCHHHHHHHHhcCCCCCEEEEE-Ccc
Confidence 3456678999 5556655 5666653 2343 655544 565
No 127
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=30.78 E-value=3.5e+02 Score=24.96 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=25.0
Q ss_pred EEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEecc
Q 021684 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (309)
Q Consensus 37 Ia~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~ 76 (309)
|.|+.+.. . |==-...-++++|.+.+|++++.+.+..
T Consensus 2 ILii~~~~--i-GD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 38 (334)
T TIGR02195 2 ILVIGPSW--V-GDMVMAQSLYRLLKKRYPQAVIDVLAPA 38 (334)
T ss_pred EEEEccch--h-HHHHHHHHHHHHHHHHCCCCEEEEEech
Confidence 44555432 1 4444455677899999999999888854
No 128
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=30.44 E-value=4e+02 Score=24.50 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEecc
Q 021684 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (309)
Q Consensus 35 ~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~ 76 (309)
|||.++++.- . |=--...-+.++|.+.+|++.+++.|..
T Consensus 1 m~ILii~~~~--i-GD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 1 MRVLIVKTSS--M-GDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred CeEEEEeccc--h-HHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 4777777653 1 3333444567799999999999888754
No 129
>PRK14762 membrane protein; Provisional
Probab=30.40 E-value=71 Score=18.40 Aligned_cols=18 Identities=33% Similarity=0.870 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 021684 6 ILIWAVITAVLASILILA 23 (309)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (309)
|+.|++...|++-++.+.
T Consensus 3 i~lw~i~iifligllvvt 20 (27)
T PRK14762 3 IILWAVLIIFLIGLLVVT 20 (27)
T ss_pred eHHHHHHHHHHHHHHHHH
Confidence 788999888888776543
No 130
>PF06024 DUF912: Nucleopolyhedrovirus protein of unknown function (DUF912); InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=29.54 E-value=49 Score=25.70 Aligned_cols=29 Identities=14% Similarity=0.317 Sum_probs=14.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHh---hhhccCCC
Q 021684 5 GILIWAVITAVLASILILASH---VHNARRNR 33 (309)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 33 (309)
.++++++++-||+++++.+.. ++|.|.+.
T Consensus 62 ~iili~lls~v~IlVily~IyYFVILRer~~~ 93 (101)
T PF06024_consen 62 NIILISLLSFVCILVILYAIYYFVILRERQKS 93 (101)
T ss_pred cchHHHHHHHHHHHHHHhhheEEEEEeccccc
Confidence 455555555555555443322 26666553
No 131
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=29.48 E-value=4e+02 Score=25.24 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCCCChHhHHHHHHHHHHHHh-CCCCeEEEE
Q 021684 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEE-SPDLDCIVY 73 (309)
Q Consensus 34 ~~rIa~~hp~l~~gGGaErV~~~la~aL~~~-~~~~~~~i~ 73 (309)
.+.|.++.|.. |.|..+.+..+++.++ +|+.++++.
T Consensus 40 ~p~VSViiP~~----nee~~l~~~L~Sl~~q~Yp~~EIivv 76 (373)
T TIGR03472 40 WPPVSVLKPLH----GDEPELYENLASFCRQDYPGFQMLFG 76 (373)
T ss_pred CCCeEEEEECC----CCChhHHHHHHHHHhcCCCCeEEEEE
Confidence 35799999988 3344455555555544 577776553
No 132
>PRK10355 xylF D-xylose transporter subunit XylF; Provisional
Probab=29.20 E-value=3.8e+02 Score=24.85 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccC
Q 021684 10 AVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (309)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~ 77 (309)
-++++.|++++. .++.-..++.+||++.|.++.. .-..++..+-.++.+.+ +++.++.+..
T Consensus 5 ~~~~~~~~~~~~----~~~~~~~~~~~Ig~i~~~~~~~-f~~~~~~gi~~~a~~~g--~~l~i~~~~~ 65 (330)
T PRK10355 5 NILLTLCASLLL----TSVAAHAKEVKIGMAIDDLRLE-RWQKDRDIFVKKAESLG--AKVFVQSANG 65 (330)
T ss_pred HHHHHHHHHHHH----hhccccCCCceEEEEecCCCch-HHHHHHHHHHHHHHHcC--CEEEEECCCC
Confidence 356788887653 3555556688999999988444 44444444445555554 6666665543
No 133
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=28.69 E-value=75 Score=24.81 Aligned_cols=21 Identities=33% Similarity=0.463 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 021684 5 GILIWAVITAVLASILILASH 25 (309)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~ 25 (309)
-.|.-+|++++++|++|.+.+
T Consensus 18 ~~LVGVv~~al~~SlLIalaa 38 (102)
T PF15176_consen 18 PFLVGVVVTALVTSLLIALAA 38 (102)
T ss_pred HhHHHHHHHHHHHHHHHHHHH
Confidence 457778889999999887654
No 134
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=27.05 E-value=82 Score=25.51 Aligned_cols=20 Identities=25% Similarity=0.587 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 021684 8 IWAVITAVLASILILASHVH 27 (309)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (309)
|+.|+..+...|++|+..++
T Consensus 70 i~gv~aGvIg~Illi~y~ir 89 (122)
T PF01102_consen 70 IFGVMAGVIGIILLISYCIR 89 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 34455555544444444443
No 135
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=25.67 E-value=92 Score=21.13 Aligned_cols=17 Identities=12% Similarity=0.030 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHhhhhcc
Q 021684 14 AVLASILILASHVHNAR 30 (309)
Q Consensus 14 ~~~~~~~~~~~~~~~~~ 30 (309)
-+.+++.+.+.+++|++
T Consensus 11 iv~~lLg~~I~~~~K~y 27 (50)
T PF12606_consen 11 IVMGLLGLSICTTLKAY 27 (50)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 34445555566777765
No 136
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=25.51 E-value=3e+02 Score=23.55 Aligned_cols=24 Identities=29% Similarity=0.376 Sum_probs=19.7
Q ss_pred ChHhHHHHHHHHHHHHhCCCCeEE
Q 021684 48 GGGERVLWCAVKAIQEESPDLDCI 71 (309)
Q Consensus 48 GGaErV~~~la~aL~~~~~~~~~~ 71 (309)
||.|-|+..+++.|.+++|+.+++
T Consensus 55 G~~~~v~~~~~~~l~~~yP~l~i~ 78 (177)
T TIGR00696 55 GGKPDVLQQLKVKLIKEYPKLKIV 78 (177)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEE
Confidence 688888888888888888887644
No 137
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.78 E-value=4.1e+02 Score=24.81 Aligned_cols=41 Identities=7% Similarity=0.078 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccC
Q 021684 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (309)
Q Consensus 34 ~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~ 77 (309)
+|||.++.++. . |=--+..-+...|++.+|++++.+++...
T Consensus 1 ~~kIliir~~~-i--GD~vlt~p~~~~lk~~~P~a~i~~~~~~~ 41 (334)
T COG0859 1 MMKILVIRLSK-L--GDVVLTLPLLRTLKKAYPNAKIDVLVPKG 41 (334)
T ss_pred CceEEEEeccc-h--hHHHhHHHHHHHHHHHCCCCEEEEEeccc
Confidence 46888888863 2 44556667778999999999999887654
No 138
>PF08113 CoxIIa: Cytochrome c oxidase subunit IIa family; InterPro: IPR012538 This family consists of the cytochrome c oxidase subunit IIa family. The bax-type cytochrome c oxidase from Thermus thermophilus is known as a two subunit enzyme. From its crystal structure, it was discovered that an additional transmembrane helix, subunit IIa, spans the membrane. This subunit consists of 34 residues forming one helix across the membrane. The presence of this subunit seems to be important for the function of cytochrome c oxidases [].; PDB: 2QPD_C 3QJR_C 3EH5_C 3BVD_C 3S39_C 3QJU_C 3QJS_C 4EV3_C 3QJT_C 4FA7_C ....
Probab=24.27 E-value=89 Score=19.31 Aligned_cols=19 Identities=21% Similarity=0.301 Sum_probs=14.6
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 021684 2 APYGILIWAVITAVLASIL 20 (309)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~ 20 (309)
.|-|-+.++.++++.|++-
T Consensus 4 kp~Gal~vv~iLt~~ILvF 22 (34)
T PF08113_consen 4 KPKGALGVVMILTAFILVF 22 (34)
T ss_dssp STHHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeHHHHHHHHHHH
Confidence 3788888888888777653
No 139
>COG0320 LipA Lipoate synthase [Coenzyme metabolism]
Probab=23.97 E-value=3.5e+02 Score=25.29 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=29.2
Q ss_pred EEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccC
Q 021684 39 FFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (309)
Q Consensus 39 ~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~ 77 (309)
+--|+| .=|||+..+ +.++++.+..|+..+-+.++++
T Consensus 122 VdRDDL-~DGGA~hfa-~~i~~Ire~~P~t~iEvL~PDF 158 (306)
T COG0320 122 VDRDDL-PDGGAQHFA-ECIRAIRELNPQTTIEVLTPDF 158 (306)
T ss_pred eccccc-cccchHHHH-HHHHHHHhhCCCceEEEeCccc
Confidence 345788 666888776 6778889999999888998875
No 140
>PF15102 TMEM154: TMEM154 protein family
Probab=23.60 E-value=48 Score=27.69 Aligned_cols=8 Identities=25% Similarity=0.193 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 021684 8 IWAVITAV 15 (309)
Q Consensus 8 ~~~~~~~~ 15 (309)
|=.|++++
T Consensus 63 IP~VLLvl 70 (146)
T PF15102_consen 63 IPLVLLVL 70 (146)
T ss_pred HHHHHHHH
Confidence 33333333
No 141
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=23.09 E-value=1.7e+02 Score=24.61 Aligned_cols=38 Identities=16% Similarity=0.399 Sum_probs=22.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhh---hhccCCCCcEEEEEc
Q 021684 3 PYGILIWAVITAVLASILILASHV---HNARRNRTTSVAFFH 41 (309)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~rIa~~h 41 (309)
-||+...=.+|.|.+.+.+++.++ .+.| +.++++-+.|
T Consensus 6 ~yglFlaK~vTvVvaI~~vv~~I~~~~~k~k-~~~G~L~Vt~ 46 (155)
T PF08496_consen 6 EYGLFLAKIVTVVVAILAVVGLIVAAAQKKK-KKKGELEVTD 46 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCCCeEEEee
Confidence 478777666666666666666665 3333 3455655554
No 142
>PF05762 VWA_CoxE: VWA domain containing CoxE-like protein; InterPro: IPR008912 This group of proteins contains a VWA type domain and the function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon in several bacteria [].
Probab=22.93 E-value=1.5e+02 Score=26.19 Aligned_cols=50 Identities=10% Similarity=0.178 Sum_probs=39.5
Q ss_pred hhc-cCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEecc
Q 021684 27 HNA-RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (309)
Q Consensus 27 ~~~-~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~ 76 (309)
.+. |++++.++.++.|--+.--|...+++.++.++.+.+++..+++|.+.
T Consensus 49 ~r~~r~~~~~~lvvl~DvSGSM~~~s~~~l~~~~~l~~~~~~~~~f~F~~~ 99 (222)
T PF05762_consen 49 RRRRRPRKPRRLVVLCDVSGSMAGYSEFMLAFLYALQRQFRRVRVFVFSTR 99 (222)
T ss_pred ccccccCCCccEEEEEeCCCChHHHHHHHHHHHHHHHHhCCCEEEEEEeee
Confidence 444 55555599999998888888788888999999999987777777543
No 143
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=22.44 E-value=34 Score=36.46 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=28.3
Q ss_pred EEEEEcCCccccChhhhhccchhHhhhccc----CCCCCccCC
Q 021684 271 AIISVAQFRPEKVRYKLISTSCLEEIRCRL----ASAQTPICG 309 (309)
Q Consensus 271 ~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~----~~~~~~~~~ 309 (309)
++..+.||..|||.+++++. ..++.+-+ .+-|.++.|
T Consensus 480 tigfarRfa~YKR~~Lil~d--l~rl~~il~~~~~pvQ~IfaG 520 (778)
T cd04299 480 TIGFARRFATYKRATLLLRD--PERLKRLLNDPERPVQFIFAG 520 (778)
T ss_pred EEeeeecchhhhhHHHHHHH--HHHHHHHhhCCCCCeEEEEEE
Confidence 68889999999999999998 88875433 244666554
No 144
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=22.35 E-value=1.3e+02 Score=30.12 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=21.6
Q ss_pred cEEEEEcCCccccChhhhhccchhHhhhcc
Q 021684 270 PAIISVAQFRPEKVRYKLISTSCLEEIRCR 299 (309)
Q Consensus 270 ~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~ 299 (309)
..+++|.|++.-|++..=++| |.++-++
T Consensus 277 ~ii~gvDrld~~kGi~~kl~A--fe~fL~~ 304 (474)
T PF00982_consen 277 KIIVGVDRLDYTKGIPEKLRA--FERFLER 304 (474)
T ss_dssp EEEEEE--B-GGG-HHHHHHH--HHHHHHH
T ss_pred EEEEEeccchhhcCHHHHHHH--HHHHHHh
Confidence 799999999999999999999 9987554
No 145
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=21.51 E-value=3.7e+02 Score=24.60 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeE
Q 021684 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDC 70 (309)
Q Consensus 34 ~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~ 70 (309)
..+|.++ ||.+-|+.+++..|++.+|++++
T Consensus 108 ~~~vfll-------Ggkp~V~~~a~~~l~~~~p~l~i 137 (253)
T COG1922 108 GKRVFLL-------GGKPGVAEQAAAKLRAKYPGLKI 137 (253)
T ss_pred CceEEEe-------cCCHHHHHHHHHHHHHHCCCceE
Confidence 3677653 79999999999999999998764
Done!