Query 021687
Match_columns 309
No_of_seqs 133 out of 1362
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 04:54:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1292 Xanthine/uracil transp 100.0 5.3E-47 1.1E-51 365.5 19.0 274 1-303 114-391 (510)
2 COG2233 UraA Xanthine/uracil p 100.0 3.9E-46 8.5E-51 362.6 21.2 248 1-303 105-365 (451)
3 PRK11412 putative uracil/xanth 100.0 4.1E-43 9E-48 344.0 25.2 248 4-302 103-359 (433)
4 PF00860 Xan_ur_permease: Perm 100.0 1.1E-41 2.3E-46 331.3 17.4 256 1-303 89-352 (389)
5 PRK10720 uracil transporter; P 100.0 1.6E-39 3.5E-44 319.4 24.1 252 1-303 86-345 (428)
6 TIGR03616 RutG pyrimidine util 100.0 2.1E-39 4.5E-44 318.6 24.3 253 2-303 110-365 (429)
7 TIGR00801 ncs2 uracil-xanthine 100.0 1.7E-38 3.6E-43 311.3 23.7 255 1-303 90-354 (415)
8 TIGR03173 pbuX xanthine permea 100.0 3.4E-37 7.4E-42 301.2 24.5 251 1-303 82-338 (406)
9 COG2252 Xanthine/uracil/vitami 99.9 1.5E-20 3.3E-25 182.6 19.0 242 2-296 102-362 (436)
10 PF03594 BenE: Benzoate membra 99.8 4.1E-18 8.9E-23 162.7 16.2 223 1-280 87-317 (378)
11 TIGR00843 benE benzoate transp 99.8 1.6E-17 3.5E-22 160.8 18.4 223 1-280 103-333 (395)
12 COG3135 BenE Uncharacterized p 99.6 3.9E-15 8.4E-20 140.2 15.9 223 1-280 102-332 (402)
13 COG0659 SUL1 Sulfate permease 99.6 1.6E-13 3.5E-18 139.1 20.9 238 2-299 98-359 (554)
14 TIGR00815 sulP high affinity s 99.4 1.4E-11 3.1E-16 125.6 22.3 241 4-300 99-371 (563)
15 PRK11660 putative transporter; 99.4 4.4E-11 9.6E-16 122.1 21.9 250 4-299 105-390 (568)
16 PF00916 Sulfate_transp: Sulfa 99.1 1.9E-10 4.2E-15 106.7 8.8 234 19-302 2-261 (280)
17 KOG0236 Sulfate/bicarbonate/ox 98.4 2.1E-05 4.5E-10 82.0 19.1 230 3-278 167-428 (665)
18 PF11840 DUF3360: Protein of u 96.4 0.19 4E-06 48.9 15.8 221 9-266 149-381 (492)
19 TIGR00834 ae anion exchange pr 95.9 0.49 1.1E-05 51.1 17.6 176 82-300 590-787 (900)
20 KOG1172 Na+-independent Cl/HCO 95.1 3.4 7.4E-05 44.3 20.0 175 82-300 569-763 (876)
21 TIGR00843 benE benzoate transp 60.1 35 0.00076 33.8 7.5 88 5-104 301-393 (395)
22 TIGR00815 sulP high affinity s 50.7 1.3E+02 0.0028 30.9 10.2 105 173-300 18-139 (563)
23 PF03594 BenE: Benzoate membra 49.1 13 0.00029 36.4 2.5 51 231-299 84-134 (378)
24 PF00955 HCO3_cotransp: HCO3- 48.8 5.7 0.00012 40.5 0.0 179 82-305 275-475 (510)
25 COG0659 SUL1 Sulfate permease 38.3 1.3E+02 0.0029 31.1 8.0 105 172-299 24-139 (554)
26 TIGR03173 pbuX xanthine permea 33.3 4.3E+02 0.0094 25.7 10.5 33 8-40 298-330 (406)
27 COG3135 BenE Uncharacterized p 32.5 51 0.0011 32.3 3.6 47 233-297 101-147 (402)
28 PF04284 DUF441: Protein of un 31.1 2.4E+02 0.0052 23.9 7.0 99 8-107 18-122 (140)
29 PRK11412 putative uracil/xanth 26.7 3.7E+02 0.008 26.9 8.7 36 7-42 319-354 (433)
30 PRK11660 putative transporter; 22.8 5.8E+02 0.013 26.2 9.6 104 173-299 33-144 (568)
31 COG4064 MtrG Tetrahydromethano 20.1 1.5E+02 0.0032 22.1 3.2 28 80-107 40-67 (75)
No 1
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=5.3e-47 Score=365.46 Aligned_cols=274 Identities=44% Similarity=0.810 Sum_probs=252.7
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCCCCCccchHHHHHHHHHHHHH--HHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALY--LRG 78 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~~~~i~l~~~~lv~~v~l~--~~~ 78 (309)
||+++|++++++.+++++|++|+.+++.|++.|+.+.+.++++|+++.+.+.+..+.+++++++.+.+++++++| +..
T Consensus 114 mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~ 193 (510)
T KOG1292|consen 114 MREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGLFQDGFPKLGKHWEISLPEILLLILFSQYASLPK 193 (510)
T ss_pred HHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhhHHhhhhhhhhheeecHHHHHHHHHHHHhhhccc
Confidence 689999999999999999999999999999999999999999999999999999999999999998888888887 211
Q ss_pred --HHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCccee
Q 021687 79 --ISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVR 156 (309)
Q Consensus 79 --~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w~~ 156 (309)
.....++.++++++++++++.|++|++++..|.+++++ -+|+++||+|.+..++++||+.
T Consensus 194 ~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~------------------~~t~~~~RTD~~~vi~~apWi~ 255 (510)
T KOG1292|consen 194 KGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKP------------------TTTQSSCRTDRNGVISSAPWIR 255 (510)
T ss_pred ccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCc------------------cccCCcccccHhhhhccCCcee
Confidence 11123567899999999999999999999888776542 3578899999986678899999
Q ss_pred ccCCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCcccc
Q 021687 157 IPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTE 236 (309)
Q Consensus 157 ~P~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~se 236 (309)
+|+|++||.|.||......|....+++++||+|+|.+++|.++.++++++.+||++..||+|++++|++|++.++|+|+|
T Consensus 256 vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~E 335 (510)
T KOG1292|consen 256 VPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVE 335 (510)
T ss_pred ecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHHHHhhCCCccceeecc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred chhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHhh
Q 021687 237 NVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSILN 303 (309)
Q Consensus 237 n~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~~ 303 (309)
|+|++++||++|||+++++|.+|+++|++.||+|++++| | .|+++|++...+++.+
T Consensus 336 Nigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsI-----P------~piv~~l~c~~~~mv~ 391 (510)
T KOG1292|consen 336 NIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASI-----P------DPIVGGLLCILFGMVG 391 (510)
T ss_pred ceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcC-----c------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 7 7999999999988865
No 2
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.9e-46 Score=362.64 Aligned_cols=248 Identities=23% Similarity=0.441 Sum_probs=220.1
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhHH-HHHhhcCccchHHHHHHHhhhhhhhhccCCCC------------CccchHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTGLMS-LFLRLINPVVVAPTVAAIGLAFFSYGFPQAGS------------CVEISIPQIL 67 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg~~~-~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~------------~~~i~l~~~~ 67 (309)
++.++|+++.+|+++++++. +.+ |++|+|||+|+|.+++.||++|+++++++++. ..++.+...+
T Consensus 105 ~~~~~G~ii~ag~~~~li~~--~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~~~~~~~~~l~la~~t 182 (451)
T COG2233 105 IAALLGGIIAAGLVYFLISP--IVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGSLENLGLALVT 182 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHH--HHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCCcccCchhHHHHHHHH
Confidence 36789999999999999987 567 99999999999999999999999998886431 1123333322
Q ss_pred HHHHHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccc
Q 021687 68 LVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSN 147 (309)
Q Consensus 68 lv~~v~l~~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 147 (309)
++. +..++++.|+++|++++++|+++||++++++ |+. |++
T Consensus 183 l~~-----il~~~~f~~g~~~~i~ILiGlv~G~~la~~~---G~v-------------------------------df~- 222 (451)
T COG2233 183 LLI-----ILLINRFGKGFLRRIPILIGLVVGYLLALFM---GMV-------------------------------DFS- 222 (451)
T ss_pred HHH-----HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---CCc-------------------------------Ccc-
Confidence 221 2346889999999999999999999999999 654 666
Q ss_pred cccCCcceeccCCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCC
Q 021687 148 AWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGS 227 (309)
Q Consensus 148 ~~~~~~w~~~P~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt 227 (309)
.+.++|||++|.|++|+. +||+.+++++++.+++++.|++|++.++++.++++...+++++|++++||++++++|+||+
T Consensus 223 ~v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~rg~~aDGlat~iag~fg~ 301 (451)
T COG2233 223 GVAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRRGLLADGLATLIAGLFGG 301 (451)
T ss_pred ccccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccccceeeccHHHHHHHhcCC
Confidence 578899999999999999 9999999999999999999999999999999997654456799999999999999999997
Q ss_pred CCCCCccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHhh
Q 021687 228 GTGSSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSILN 303 (309)
Q Consensus 228 ~~~~t~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~~ 303 (309)
+|+|+|+||+|++++||++|||+...++++++++|++||+++++++| | .||+||+..++|++..
T Consensus 302 -~p~TtfaqNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sI-----P------~pVlGGa~ivmFG~Ia 365 (451)
T COG2233 302 -FPNTTFAQNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSI-----P------SPVLGGAMLVLFGMIA 365 (451)
T ss_pred -CCCCchhhceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhC-----C------hhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 8 8999999999999864
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=4.1e-43 Score=344.02 Aligned_cols=248 Identities=16% Similarity=0.225 Sum_probs=207.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCC-CC-------CccchHHHHHHHHHHHHH
Q 021687 4 LQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQA-GS-------CVEISIPQILLVLIFALY 75 (309)
Q Consensus 4 ~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~-g~-------~~~i~l~~~~lv~~v~l~ 75 (309)
.+|+++++|++++++|++|+.+|++|+|||.|+|+++++||++|++.++++. |. ..+..+....+.+.....
T Consensus 103 l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~~~~~~~~~~~~~~a~~~l~~ 182 (433)
T PRK11412 103 LAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIADPNGKIQLPPFGLSVAVMCL 182 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCcccccccchHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999999999999999988753 21 111111111111111112
Q ss_pred HHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCcce
Q 021687 76 LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWV 155 (309)
Q Consensus 76 ~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w~ 155 (309)
+..+++++||++|++++++|+++||+++.+.. |. |++ .+.+++|.
T Consensus 183 il~~~~~~~g~~~~~svLiGiv~G~v~a~~~~--g~--------------------------------d~~-~v~~a~w~ 227 (433)
T PRK11412 183 VLAMIIFLPQRIARYSLLVGTIVGWILWAFCF--PS--------------------------------SHS-LSGELHWQ 227 (433)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh--CC--------------------------------Ccc-hhccCCce
Confidence 33567899999999999999999999866431 33 333 44667885
Q ss_pred eccCCCCCCCce-ecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCcc
Q 021687 156 RIPYPLQWGIPI-FHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTL 234 (309)
Q Consensus 156 ~~P~p~~~g~P~-f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~ 234 (309)
. ++|+.|. ||+..++++++.+++.+.|++|++.+++|.+++|.+++++++|++.+||++++++|+||+ .|+|+|
T Consensus 228 ~----~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~laglfg~-~p~tt~ 302 (433)
T PRK11412 228 W----FPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAV-IPFSPF 302 (433)
T ss_pred e----ecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHhcCC-CCCCch
Confidence 3 4589995 999999999999999999999999999999986655467899999999999999999997 999999
Q ss_pred ccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHh
Q 021687 235 TENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSIL 302 (309)
Q Consensus 235 sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~ 302 (309)
+||+|++++||++|||++.++|++++++|++||+++++++| | .||+||+..++|+++
T Consensus 303 sqNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~I-----P------~pVlGg~~~~~Fg~I 359 (433)
T PRK11412 303 VSSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSI-----P------LPVSSAVMLVSYLPL 359 (433)
T ss_pred hhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----C------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 8 899999999999865
No 4
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=1.1e-41 Score=331.30 Aligned_cols=256 Identities=29% Similarity=0.501 Sum_probs=193.2
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCCCCCc---c---ch-HHHHHHHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCV---E---IS-IPQILLVLIFA 73 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~~~---~---i~-l~~~~lv~~v~ 73 (309)
+|+++|+++++|+++++++++|.++|++|+|||.+.+.++++||+++.+.++++.+..+ + .. ...........
T Consensus 89 ~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (389)
T PF00860_consen 89 LQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLVGDGKNLGLAVLTL 168 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B---HHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccccccccccccccccccccc
Confidence 37899999999999999999999999999999999999999999999999888764322 1 11 11111111111
Q ss_pred HHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhcccccccccccccc-ccCC
Q 021687 74 LYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNA-WRTA 152 (309)
Q Consensus 74 l~~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~ 152 (309)
.....++++.|+++|++++++|+++||++++.++ .. |++ + +.++
T Consensus 169 ~~~~~~~~~~~~~~~~~ailigi~~g~i~~~~~g---~~-------------------------------~~~-~~~~~~ 213 (389)
T PF00860_consen 169 LFILLLSLFLKGFLRKGAILIGIIAGWIVAAILG---VV-------------------------------DFS-PSVSSA 213 (389)
T ss_dssp HHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHH---HT-------------------------------TSS-H-HHHS
T ss_pred hhhhhhhhhhhhhcccccchhhhhhhhhhhhccc---cc-------------------------------ccC-cccccc
Confidence 1223457789999999999999999999999994 33 333 3 5678
Q ss_pred cceeccCCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCC
Q 021687 153 AWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSS 232 (309)
Q Consensus 153 ~w~~~P~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t 232 (309)
||+++|.+++|+.|+||+..+++++++++++++|++||+.+++|.+|+++++++++||++.+||++++++|++|+ +|+|
T Consensus 214 ~~~~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~-~~~t 292 (389)
T PF00860_consen 214 PWFSLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFGT-SPTT 292 (389)
T ss_dssp -SS--------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT----EE
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhcC-CCCc
Confidence 999999999999999999999999999999999999999999999996655577899999999999999999998 9999
Q ss_pred ccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHhh
Q 021687 233 TLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSILN 303 (309)
Q Consensus 233 ~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~~ 303 (309)
+|+||+|+++.||++|||+...+++++++++++||++++++.| | .||++|..+++++++-
T Consensus 293 ~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~I-----P------~~v~gg~~lv~~g~i~ 352 (389)
T PF00860_consen 293 TYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASI-----P------SPVIGGPLLVLFGMIM 352 (389)
T ss_dssp E-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS------------HHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHH-----H------HHHhccchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 7 8999999998888753
No 5
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=1.6e-39 Score=319.40 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=211.0
Q ss_pred ChhhHHHHHHHHHHHHHHhhhh--h-HHHHHhhcCccchHHHHHHHhhhhhhhhccCCCCCc----cchHHHHHHHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTG--L-MSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCV----EISIPQILLVLIFA 73 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg--~-~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~~~----~i~l~~~~lv~~v~ 73 (309)
+|+++|+++++|+++++++++. + ++|++|+|||.++|.++++||+++.+.++++.|... ..+... .++.+++
T Consensus 86 ~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~g~~~~~~~~~~~~~-~~lalv~ 164 (428)
T PRK10720 86 YEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKT-IIISMVT 164 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhccccCCCCcccchHH-HHHHHHH
Confidence 3789999999999999999862 1 789999999999999999999999998887654211 111111 1111122
Q ss_pred HH-HHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCC
Q 021687 74 LY-LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTA 152 (309)
Q Consensus 74 l~-~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 152 (309)
+. +..++++.||++|++++++|+++||++++.+ |.. |++ .+.++
T Consensus 165 l~iil~~~~~~kg~~~~~~iLigIvvG~ila~~l---G~~-------------------------------d~~-~v~~a 209 (428)
T PRK10720 165 LAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAM---GMV-------------------------------DTT-PIIEA 209 (428)
T ss_pred HHHHHHHHHHhccHHHHhHHHHHHHHHHHHHHHh---cCC-------------------------------CHH-HhhcC
Confidence 21 1235678899999999999999999999998 543 343 45667
Q ss_pred cceeccCCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCC
Q 021687 153 AWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSS 232 (309)
Q Consensus 153 ~w~~~P~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t 232 (309)
+|+++|. |+.|+||+..++.+++.+++.++|++|++.++++..+++..+++++||++.+||++|+++|++|+ +|+|
T Consensus 210 ~~~~lP~---~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~-~p~t 285 (428)
T PRK10720 210 HWFALPT---FYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGS-TPNT 285 (428)
T ss_pred ccccCCC---CCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCC-CCcc
Confidence 8999994 66789999999999999999999999999999998875533355789999999999999999997 9999
Q ss_pred ccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHhh
Q 021687 233 TLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSILN 303 (309)
Q Consensus 233 ~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~~ 303 (309)
+|+||+|+++.||++||+++.+++++++++|++||++++++.| | .||+||+..++++++.
T Consensus 286 ty~en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~i-----P------~pVlgg~~i~~fg~i~ 345 (428)
T PRK10720 286 TYGENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAI-----P------LPVMGGVSLLLYGVIG 345 (428)
T ss_pred ccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----C------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8 8999999999998764
No 6
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=2.1e-39 Score=318.60 Aligned_cols=253 Identities=22% Similarity=0.379 Sum_probs=212.4
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhH---HHHHhhcCccchHHHHHHHhhhhhhhhccCCCCCccchHHHHHHHHHHHHHHHH
Q 021687 2 RELQGAIIVGSIFQSILGFTGLM---SLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRG 78 (309)
Q Consensus 2 ~~~~GavivaGl~~iilg~tg~~---~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~~~~i~l~~~~lv~~v~l~~~~ 78 (309)
++++|+++++|++++++++++++ +|++|+|||.|+|.++++||++++++++++.+.. +...+...+. ++. +..
T Consensus 110 ~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~~-~~~~~~al~t-l~~--i~l 185 (429)
T TIGR03616 110 ALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSAS-GFDSWMAVLT-ILC--IGA 185 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhcccc-ccccHHHHHH-HHH--HHH
Confidence 67899999999999999998655 8999999999999999999999999998865321 1111111111 111 112
Q ss_pred HHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCcceecc
Q 021687 79 ISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIP 158 (309)
Q Consensus 79 ~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~P 158 (309)
++++.|+++|++++++|+++||++++.+.. .+..+ +++|++ .+.+++|+++|
T Consensus 186 ~~l~~~~~l~~~avLiGivvG~iva~~l~~--~~g~~-------------------------~~vd~s-~v~~a~~~~lP 237 (429)
T TIGR03616 186 VAVFTRGMLQRLLILVGLIAAYLAYFILTN--VFGLG-------------------------KAVDFS-PISQAAWFGLP 237 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCC-------------------------ccccCc-ccccCccccCC
Confidence 467899999999999999999999998631 11110 124776 67788999999
Q ss_pred CCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCccccch
Q 021687 159 YPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENV 238 (309)
Q Consensus 159 ~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~ 238 (309)
+|+.|+||+..++.+++.++++++|++|++.++++..+++ .++ ++||++.+||++|+++|++|+ .|+|+|+||+
T Consensus 238 ---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~-~~~-~i~r~l~adGl~t~~agl~g~-~p~tt~~en~ 311 (429)
T TIGR03616 238 ---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTGRN-LDP-YMGRAFVGDGLATMLSGSVGG-TGVTTYAENI 311 (429)
T ss_pred ---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCC-CCc-hhccchhhhhHHHHHHHhcCC-CCCcceeeee
Confidence 5788999999999999999999999999999999998744 333 589999999999999999997 9999999999
Q ss_pred hhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHhh
Q 021687 239 HTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSILN 303 (309)
Q Consensus 239 g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~~ 303 (309)
|+++.||++||+++..++++++++|++||++++++.| | .||++|++..+++++.
T Consensus 312 g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~I-----P------~pVlgG~~i~~fg~i~ 365 (429)
T TIGR03616 312 GVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTI-----P------VAVLGGASIVVFGLIA 365 (429)
T ss_pred eeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhC-----C------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 7 8999999999998764
No 7
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=1.7e-38 Score=311.29 Aligned_cols=255 Identities=24% Similarity=0.437 Sum_probs=213.7
Q ss_pred ChhhHHHHHHHHHHHHHHhhh--h-hHHHHHhhcCccchHHHHHHHhhhhhhhhccCCCC------CccchHHHHHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFT--G-LMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGS------CVEISIPQILLVLI 71 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~t--g-~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~------~~~i~l~~~~lv~~ 71 (309)
.|+++|+++++|+++++++.+ + .++|++|+|||.+++.++++||+++++.++++.+. ..+...+....+.+
T Consensus 90 ~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~~~~~~~~~~~vg~ 169 (415)
T TIGR00801 90 IPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSSATYGSLENLGVAF 169 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCcccccccCchhhHHHHH
Confidence 378999999999999999975 3 46899999999999999999999999998887531 11111111111111
Q ss_pred HHHH-HHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhcccccccccccccccc
Q 021687 72 FALY-LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWR 150 (309)
Q Consensus 72 v~l~-~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 150 (309)
+++. +..++++.|+++|++++++++++||++++.+ |.. |++ .+.
T Consensus 170 ~~l~~~vl~~~~~~g~~~~~aiLigiv~g~i~a~~l---g~~-------------------------------~~~-~v~ 214 (415)
T TIGR00801 170 VVLALIILLNRFGKGFLKSISILIGILVGYILALFM---GIV-------------------------------DFS-PVI 214 (415)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHc---CCc-------------------------------cch-hhc
Confidence 1111 2346788999999999999999999999998 543 333 345
Q ss_pred CCcceeccCCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCC
Q 021687 151 TAAWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTG 230 (309)
Q Consensus 151 ~~~w~~~P~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~ 230 (309)
+.||+++|.+++|+ |+||+..+..++++++++++|++|++.++++.+|+|.++++++||++.+||++|+++|++|+ +|
T Consensus 215 ~~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~-~p 292 (415)
T TIGR00801 215 DAPWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGG-FP 292 (415)
T ss_pred cCcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCC-CC
Confidence 67999999888888 79999999999999999999999999999999986443256789999999999999999997 99
Q ss_pred CCccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHhh
Q 021687 231 SSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSILN 303 (309)
Q Consensus 231 ~t~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~~ 303 (309)
+|+|+||+|+++.||++||++...+|+++++++++||++++++.+ | .||++|+.+.+++++.
T Consensus 293 ~t~~sen~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~i-----P------~~vlgg~~l~~~~~i~ 354 (415)
T TIGR00801 293 NTTFAQNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSI-----P------SPVLGGASIVMFGMIA 354 (415)
T ss_pred CcchhhhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhC-----C------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 7 8999999999888654
No 8
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=3.4e-37 Score=301.18 Aligned_cols=251 Identities=25% Similarity=0.409 Sum_probs=211.6
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCCCC------CccchHHHHHHHHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGS------CVEISIPQILLVLIFAL 74 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~------~~~i~l~~~~lv~~v~l 74 (309)
+|+++|+++++|+++++++ ++++|++|+|||.++|.++++||+++.+.++++.+. ..+.....+.+..++.
T Consensus 82 ~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~~~~~~~l~l~~l~~- 158 (406)
T TIGR03173 82 LGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFGSPQNLGLALLTLVI- 158 (406)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcccccchHHHHHHHHHHHH-
Confidence 3789999999999999999 489999999999999999999999999888765421 1111111222222221
Q ss_pred HHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCcc
Q 021687 75 YLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAW 154 (309)
Q Consensus 75 ~~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w 154 (309)
+..++++.|+++|++++++++++||++++.+ |.. |++ .+.+.+|
T Consensus 159 -~il~~~~~~~~~~~~aiLi~ivvg~iva~~~---g~~-------------------------------~~~-~i~~~~~ 202 (406)
T TIGR03173 159 -ILLLNRFGKGFLRSIAVLLGLVVGTIVAAAL---GMV-------------------------------DFS-GVAEAPW 202 (406)
T ss_pred -HHHHHHHhhhHHHHhHHHHHHHHHHHHHHHh---cCC-------------------------------Cch-hhccCCe
Confidence 1235678899999999999999999999998 543 332 3455789
Q ss_pred eeccCCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCcc
Q 021687 155 VRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTL 234 (309)
Q Consensus 155 ~~~P~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~ 234 (309)
+.+|.|++|+.|+||+..+..++.+++++++|++|++.++++..|+| .|++++||++.+||++|+++|++|+ +|+|+|
T Consensus 203 ~~~P~~~~~~~P~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~-~~~~~~~~~l~~~Gi~~i~aglfG~-~p~t~~ 280 (406)
T TIGR03173 203 FALPTPFHFGAPTFDLVAILTMIIVYLVSMVETTGDFLALGEITGRP-ITEKDLAGGLRADGLGSALGGLFNT-FPYTSF 280 (406)
T ss_pred eeCCCCCcCCCCeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCchhccchHHhccHHHHHHHHhCC-CCCcch
Confidence 99998888999999999999999999999999999999999998744 3556799999999999999999996 999999
Q ss_pred ccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHhh
Q 021687 235 TENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSILN 303 (309)
Q Consensus 235 sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~~ 303 (309)
+||++.++.||.+||++...+|+++++++++||++++++.+ | .||++|+++.+++++.
T Consensus 281 ~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~i-----P------~~vlgg~~l~~~~~i~ 338 (406)
T TIGR03173 281 SQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASI-----P------QPVLGGAGLVMFGMVA 338 (406)
T ss_pred hhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhC-----C------HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 7 7999999888877654
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.86 E-value=1.5e-20 Score=182.62 Aligned_cols=242 Identities=16% Similarity=0.217 Sum_probs=172.0
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCCC-------------CCcc--chHHHH
Q 021687 2 RELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAG-------------SCVE--ISIPQI 66 (309)
Q Consensus 2 ~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g-------------~~~~--i~l~~~ 66 (309)
|+++|+++++|+++++++++|+|+|++|.+|....-.+.+.||+.+...++++.| +..+ +-+..+
T Consensus 102 q~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGlFia~IgL~~~Givv~~~~tlv~LG~~~~p~vll~i~ 181 (436)
T COG2252 102 QVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGLFIALIGLKNAGIVVANPATLVALGDFTSPGVLLAIL 181 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhCCeEEecCcceEEeecCCCchHHHHHH
Confidence 8999999999999999999999999999999877666666666666555555443 2211 112222
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhcccccccccccc
Q 021687 67 LLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVS 146 (309)
Q Consensus 67 ~lv~~v~l~~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 146 (309)
.+.+.+.+ ..+++ +.+++++++..+++++.+ |.....+ +
T Consensus 182 G~~l~~~L-------~~~~i--~Gaili~i~~~t~~g~~~---g~~~~~~---------------------------~-- 220 (436)
T COG2252 182 GLLLIIVL-------VSRKI--KGAILIGILVTTILGIIL---GIDVHFG---------------------------G-- 220 (436)
T ss_pred HHHHHHHH-------HHhhc--cHhhhHHHHHHHHHHHHh---ccccccc---------------------------c--
Confidence 22222221 22332 348999999999999999 4321110 0
Q ss_pred ccccCCcceeccCCCCCCCc--eecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCC--CCCcccccccchhcchHHHHH
Q 021687 147 NAWRTAAWVRIPYPLQWGIP--IFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSK--PPTPRIVSRGIGMEGFCSILA 222 (309)
Q Consensus 147 ~~~~~~~w~~~P~p~~~g~P--~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~--~~~~~~i~r~l~~dGlgsila 222 (309)
.....|.. .|...+.++. ...+..+...+.+.+++.+|++|++.++++.++.. +...++.+|.+.+|+++++++
T Consensus 221 -~~~~~p~~-~~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~g~~~~~~~al~~D~v~t~~g 298 (436)
T COG2252 221 -LVGAPPSL-SPIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKNGKMPRIGKALLADSVATVVG 298 (436)
T ss_pred -cccCCCCc-cchhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCCCCccccchHHHHhHHHHHHH
Confidence 00111111 1111122222 12345566778999999999999999999999832 322357899999999999999
Q ss_pred hhhCCCCCCCccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHH
Q 021687 223 GLWGSGTGSSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVS 296 (309)
Q Consensus 223 gl~Gt~~~~t~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~ 296 (309)
+++|+ ++.|+|.|+...++..+++.......+-.+++.+-+.| +...+|. |++++..++.|.++
T Consensus 299 a~~Gt-S~~t~yIESaaGva~GgrTGltavv~g~lFl~~lf~~P----l~~~vP~-----~AtapaLi~vG~lM 362 (436)
T COG2252 299 ALFGT-STVTAYIESAAGVAAGGRTGLTAVVTGLLFLLSLFFSP----LAALVPG-----YATAPALIIVGALM 362 (436)
T ss_pred HhcCC-cchhhhhhcccccccccccccHHHHHHHHHHHHHHHHH----HHHhCcH-----hhhhHHHHHHHHHH
Confidence 99998 99999999999999999999999999999999988888 8889953 34444888888754
No 10
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.78 E-value=4.1e-18 Score=162.74 Aligned_cols=223 Identities=18% Similarity=0.266 Sum_probs=173.7
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCCCCCccchHHHHHHHHHHHHHHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGIS 80 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~~~~i~l~~~~lv~~v~l~~~~~~ 80 (309)
++|+.|+.+++|++.+++|.+|+++|++|++|+.+...|++.+ +.+++++-+.+..+ .+.+....+.+ +
T Consensus 87 ~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGv---Ll~f~l~~f~a~~~--~P~l~~~ml~~------~ 155 (378)
T PF03594_consen 87 FAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGV---LLPFGLAAFTALQA--DPLLVGPMLAV------F 155 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH---HHHHHHHHHHHHHh--HHHHHHHHHHH------H
Confidence 4799999999999999999999999999999999999999966 44566554433221 34444333322 2
Q ss_pred HHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCcceeccCC
Q 021687 81 VFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYP 160 (309)
Q Consensus 81 ~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~P~p 160 (309)
...||+.+|++++..+++|.++++.. |..+.. .+ .-++..|
T Consensus 156 l~~~r~~pr~av~~al~~g~~~a~~~---g~~~~~--------------------------------~~--~~~~~~p-- 196 (378)
T PF03594_consen 156 LLARRFSPRYAVLAALVAGVAVAALT---GQLHPS--------------------------------AL--QLSLAHP-- 196 (378)
T ss_pred HHHHHHcchhHHHHHHHHHHHHHHhc---CCCCcc--------------------------------cc--cccccee--
Confidence 34577888999999999999999877 443211 11 1124344
Q ss_pred CCCCCceecHHHHHHH-HHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCccccchh
Q 021687 161 LQWGIPIFHLRTSLIM-IIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVH 239 (309)
Q Consensus 161 ~~~g~P~f~~~~il~~-~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~g 239 (309)
.|-.|+||+..++.+ +|++++++..+...-.++-|..|++ ++ .|+-+...|++|++.+.||+ + .++.+.-.+
T Consensus 197 -~~~~P~Fs~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY~--~p--~~~~~~~tGl~s~l~ApfGg-~-~~nlAaita 269 (378)
T PF03594_consen 197 -VFTTPEFSWSALVSLALPLFIVTMASQNLPGIAVLRAAGYQ--PP--VNPLITVTGLASLLAAPFGG-H-AVNLAAITA 269 (378)
T ss_pred -EEECCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHHcCCC--CC--chHHHHHHHHHHHHHhhhch-h-hhHHHHHHH
Confidence 567799999998887 8999999998888888999988853 22 68999999999999999995 7 778888888
Q ss_pred hhhhcc-----cCCchHH-HHHHHHHHHHHhhh-hHHHHhcccccCCC
Q 021687 240 TISITK-----VASRRAV-QLGAVFMIVFSFVG-KSVPFWPLYHRHWL 280 (309)
Q Consensus 240 ~i~~t~-----~~sR~~~-~~agv~lillg~~p-k~~al~~~IP~~~~ 280 (309)
.+++++ ..+||.. ..+|++++++|++. .+.+++...|++++
T Consensus 270 AIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li 317 (378)
T PF03594_consen 270 AICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALI 317 (378)
T ss_pred HHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 899874 2466764 79999999999987 88899999988765
No 11
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.77 E-value=1.6e-17 Score=160.77 Aligned_cols=223 Identities=19% Similarity=0.286 Sum_probs=166.4
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCCCCCccchHHHHHHHHHHHHHHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGIS 80 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~~~~i~l~~~~lv~~v~l~~~~~~ 80 (309)
+.|+.|+.+++|++.+++|++|+++|++|++|+.+...+++.+.+.+ +++.+.+..+ .+.+.+.+++ .+
T Consensus 103 ~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f---~l~~~~a~~~--~pll~~~mll------~~ 171 (395)
T TIGR00843 103 LNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQF---GLGAFAALDG--LFLICFSMLL------CW 171 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---HHHHHHHHHH--hHHHHHHHHH------HH
Confidence 36899999999999999999999999999999999999999776544 4333322211 2333332222 23
Q ss_pred HHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCcceeccCC
Q 021687 81 VFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYP 160 (309)
Q Consensus 81 ~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~P~p 160 (309)
...||+.|++++++++++|.++++.+ |..+.+ +.+ .+ +..|
T Consensus 172 l~~~r~~Pr~avl~aLlvG~iva~~~---G~~~~~----------------------------~~~-----~~-l~~p-- 212 (395)
T TIGR00843 172 LASKAFAPRYAMIAALICGIAFSFAL---GDMNPT----------------------------DLD-----FK-IALP-- 212 (395)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHh---cCCCcc----------------------------ccc-----cc-cccc--
Confidence 44678888999999999999999988 443221 110 01 2234
Q ss_pred CCCCCceecHHHHHHH-HHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCccccchh
Q 021687 161 LQWGIPIFHLRTSLIM-IIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVH 239 (309)
Q Consensus 161 ~~~g~P~f~~~~il~~-~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~g 239 (309)
.|..|+||+...+.. ++.+++++..+.-.-.++.|..|++++ .|+.+.++|++|++++.||+ + .++.+.-..
T Consensus 213 -~~~~P~fs~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~~p----~~~~~~~tGl~sll~ApfGg-~-~~nlaaita 285 (395)
T TIGR00843 213 -QFIAPDFSFAHSLNLALPLFLVSLAGQFAPGIAALKAAGYNAP----AKPIIAAAGLAALFAAFAGG-I-SIGIAAITA 285 (395)
T ss_pred -eeeCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCCCC----chHHHHHHHHHHHHHhccCC-c-hhhhhHHhH
Confidence 466788888777665 899999998777777888888886542 58999999999999999996 5 666677777
Q ss_pred hhhhccc-----CCchHH-HHHHHHHHHHHhh-hhHHHHhcccccCCC
Q 021687 240 TISITKV-----ASRRAV-QLGAVFMIVFSFV-GKSVPFWPLYHRHWL 280 (309)
Q Consensus 240 ~i~~t~~-----~sR~~~-~~agv~lillg~~-pk~~al~~~IP~~~~ 280 (309)
.++.+.. .+||.. ..+|++++++|++ +.+..+++.+|++++
T Consensus 286 Aic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li 333 (395)
T TIGR00843 286 AICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELI 333 (395)
T ss_pred HHhcCcccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 7777632 355553 7999999999999 799999999988755
No 12
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.65 E-value=3.9e-15 Score=140.15 Aligned_cols=223 Identities=21% Similarity=0.310 Sum_probs=172.9
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCCCCCccchHHHHHHHHHHHHHHHHHH
Q 021687 1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGIS 80 (309)
Q Consensus 1 ~~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~g~~~~i~l~~~~lv~~v~l~~~~~~ 80 (309)
+.|+.|+.+++|++.++.|.+|..+|++|.+|+.+...++..| +.+++++....... .+.+++...+. |
T Consensus 102 ~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGI---LL~F~l~a~~a~~~--~p~l~lpmv~~-~----- 170 (402)
T COG3135 102 FAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGI---LLRFGLKAFKALPT--QPLLVLPMVLA-Y----- 170 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHH---HHHHHHHHHhccCC--ChHHHHHHHHH-H-----
Confidence 4689999999999999999999999999999999999999866 55667665432211 23434333322 2
Q ss_pred HHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCcceeccCC
Q 021687 81 VFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYP 160 (309)
Q Consensus 81 ~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~P~p 160 (309)
...|.+-++|+++..+++|..++... |..+.. | ...-...|
T Consensus 171 ll~r~f~pr~aV~aalvvgv~va~~~---G~~~~~----------------------------~------~~~~~~~p-- 211 (402)
T COG3135 171 LLARVFAPRYAVIAALVVGVLVAALL---GDLHTA----------------------------L------VALEISTP-- 211 (402)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHh---Cccccc----------------------------c------cccccCcc--
Confidence 23466777889999999999999998 544321 1 11223345
Q ss_pred CCCCCceecHHHHHHH-HHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCccccchh
Q 021687 161 LQWGIPIFHLRTSLIM-IIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVH 239 (309)
Q Consensus 161 ~~~g~P~f~~~~il~~-~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~g 239 (309)
.|-.|+||+...+.. ++++++++..+...-.++-|..|+++ ..+.-+...|+.+++++.||+ . +++...-.+
T Consensus 212 -~~v~P~Fs~~A~l~lalPL~lvtmasQN~pGiAvLka~gY~p----p~~pl~~~TGl~sll~ApfG~-~-t~nLaAItA 284 (402)
T COG3135 212 -TWVTPEFSFAAMLSLALPLFLVTMASQNLPGIAVLKAAGYQP----PPSPLIVATGLASLLSAPFGG-H-TVNLAAITA 284 (402)
T ss_pred -eeeCCcccHHHHHHHhHHHHHHHHHhccCccceeehhcCCCC----CCchHHHHhHHHHHHhccccc-c-eecHHHHHH
Confidence 577899999988887 89999999999888899999888543 246778999999999999996 6 778888888
Q ss_pred hhhhcc-----cCCchHH-HHHHHHHHHHHhhh-hHHHHhcccccCCC
Q 021687 240 TISITK-----VASRRAV-QLGAVFMIVFSFVG-KSVPFWPLYHRHWL 280 (309)
Q Consensus 240 ~i~~t~-----~~sR~~~-~~agv~lillg~~p-k~~al~~~IP~~~~ 280 (309)
.++++. ..+||.. .++|++.+++|+|. .+.+++...|..++
T Consensus 285 Aic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li 332 (402)
T COG3135 285 AICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLI 332 (402)
T ss_pred HHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHH
Confidence 888874 3466664 69999999999988 89999999987655
No 13
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.58 E-value=1.6e-13 Score=139.06 Aligned_cols=238 Identities=16% Similarity=0.217 Sum_probs=157.6
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccC------CCC-C-----------ccchH
Q 021687 2 RELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQ------AGS-C-----------VEISI 63 (309)
Q Consensus 2 ~~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~------~g~-~-----------~~i~l 63 (309)
+.+.-+.+++|++++++|..|+ +++.|++|..|+-.++..||+.++--.++. .++ . .....
T Consensus 98 ~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~~~~~~~l~~~~~~~~~ 176 (554)
T COG0659 98 ALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGFWAKVSALFTVLLTINL 176 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchHHHHHHHHHhcccccH
Confidence 4567788999999999999995 999999999999999999999877443332 111 0 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhhH-HHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhcccccccc
Q 021687 64 PQILLVLIFALYLRGISVFGHHLFRIYA-VPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCR 142 (309)
Q Consensus 64 ~~~~lv~~v~l~~~~~~~~~~g~~~~~a-iLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (309)
.... +.++++.+ -.+.+++.+++| .++++++++.+++.+... ..... +
T Consensus 177 ~~~~-lg~~~l~i---l~~~~~~~~~~P~~liaiv~~t~i~~~~~~~-~~~~G----~---------------------- 225 (554)
T COG0659 177 ATLL-LGLLTLAI---LLFLPRLTPRIPSPLIALVLGTLIVWIFPLD-SLRYG----E---------------------- 225 (554)
T ss_pred HHHH-HHHHHHHH---HHHccchhhhCCcHHHHHHHHHHHHHHhcCC-chhcc----c----------------------
Confidence 1211 11222211 112344445555 899999999999998421 00000 0
Q ss_pred ccccccccCCcceeccCCCCCCCceecH----HHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchH
Q 021687 143 TDVSNAWRTAAWVRIPYPLQWGIPIFHL----RTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFC 218 (309)
Q Consensus 143 ~d~~~~~~~~~w~~~P~p~~~g~P~f~~----~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlg 218 (309)
+..+.....+|+.+ |.+++ ..+...+.++++..+|+..+..+.++..|+ +++.||++.++|++
T Consensus 226 -i~~~lp~~~~~~~~--------P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d~nrELiaqGia 292 (554)
T COG0659 226 -IPGSLPSGLPHFRL--------PNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHDSNRELIAQGIA 292 (554)
T ss_pred -CcccCCcCCCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCHHHHHhhHH
Confidence 11101122333444 44443 455566788999999999999999988873 35569999999999
Q ss_pred HHHHhhhCCCCCCCc-cccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHH
Q 021687 219 SILAGLWGSGTGSST-LTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQ 297 (309)
Q Consensus 219 silagl~Gt~~~~t~-~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~ 297 (309)
|+.+|+||+ .|.|. |+.++..+. +|.++|.+.++++++++++-++ ++.++..| | -+++++++..
T Consensus 293 Ni~sglfgg-~p~~g~~srS~~nv~-sGarT~lsgi~~a~~lll~l~~--~~~~~~~I-----P------~a~Laavli~ 357 (554)
T COG0659 293 NIASGLFGG-IPATGSISRSAINIK-SGARTRLSGIIHAALLLLLLLF--LAPLVSYI-----P------LAALAAVLIL 357 (554)
T ss_pred HHHHHHhCC-ccccchhHHHHHHHH-hCCcChHHHHHHHHHHHHHHHH--HHHHHHhC-----c------HHHHHHHHHH
Confidence 999999996 66655 666666665 6778888888887777665443 45688888 6 6777777655
Q ss_pred HH
Q 021687 298 IC 299 (309)
Q Consensus 298 ~~ 299 (309)
+.
T Consensus 358 v~ 359 (554)
T COG0659 358 VG 359 (554)
T ss_pred HH
Confidence 43
No 14
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.44 E-value=1.4e-11 Score=125.56 Aligned_cols=241 Identities=12% Similarity=0.134 Sum_probs=151.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhh------hccCC--CC------------Cccc--
Q 021687 4 LQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSY------GFPQA--GS------------CVEI-- 61 (309)
Q Consensus 4 ~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~------~~~~~--g~------------~~~i-- 61 (309)
+....+++|++++++|+.|+ +++.+++|..|+..++..+|+.++.- |++.. ++ ..+.
T Consensus 99 a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~l~~~~~ 177 (563)
T TIGR00815 99 AFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHN 177 (563)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccc
Confidence 44678899999999999995 89999999999999999999977632 33221 10 0011
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhchhh----hh-hHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhc
Q 021687 62 -SIPQILLVLIFALYLRGISVFGHHLF----RI-YAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHA 135 (309)
Q Consensus 62 -~l~~~~lv~~v~l~~~~~~~~~~g~~----~~-~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (309)
+.....+.+.....+...+++.+++- .. ...++.+++++++.+.+. ..+.
T Consensus 178 ~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~---~~~~--------------------- 233 (563)
T TIGR00815 178 WNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGL---HKKQ--------------------- 233 (563)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHc---cCCC---------------------
Confidence 22222222111111222233333221 11 246788888888776652 1100
Q ss_pred cccccccccccccccCCcceeccCCCCCCCceecHH----HHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCccccccc
Q 021687 136 YTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLR----TSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRG 211 (309)
Q Consensus 136 ~~~~~~~~d~~~~~~~~~w~~~P~p~~~g~P~f~~~----~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~ 211 (309)
+.. .+.+-|- .+| .+..|.+|+. .+...+.++++..+|++....+.++..++ +.+.||+
T Consensus 234 --------~~~-~~g~ip~-g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~----~~d~n~E 296 (563)
T TIGR00815 234 --------GVS-ILGHIPS-GLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGY----KIDANQE 296 (563)
T ss_pred --------CeE-EEeecCC-CCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCCcHH
Confidence 110 1111110 112 2334455543 44455788999999999998888877652 2346999
Q ss_pred chhcchHHHHHhhhCCCCCCCccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchH
Q 021687 212 IGMEGFCSILAGLWGSGTGSSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLL 291 (309)
Q Consensus 212 l~~dGlgsilagl~Gt~~~~t~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~ 291 (309)
+.++|++|+++|++|+ .|.+.+.....+-..+|.++|.+..+++++++++.++ +..++..+ | .+++
T Consensus 297 l~a~G~~N~~~~~fg~-~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~--~~~~l~~i-----P------~~~l 362 (563)
T TIGR00815 297 LVAQGIANIVGSFFSC-YPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLV--LTPLFYYI-----P------QAAL 362 (563)
T ss_pred HHHhhHHHHHHHHhCc-cCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHH--HHHHHHhC-----h------HHHH
Confidence 9999999999999996 7777544444455557888999988888877666554 44588888 6 6788
Q ss_pred HHHHHHHHH
Q 021687 292 WQLVSQICS 300 (309)
Q Consensus 292 ~g~~~~~~~ 300 (309)
+|++....-
T Consensus 363 a~ili~~~~ 371 (563)
T TIGR00815 363 AAIIISAVR 371 (563)
T ss_pred HHHHHHHHh
Confidence 887766543
No 15
>PRK11660 putative transporter; Provisional
Probab=99.39 E-value=4.4e-11 Score=122.07 Aligned_cols=250 Identities=12% Similarity=0.122 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccCC-CC-------------------CccchH
Q 021687 4 LQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQA-GS-------------------CVEISI 63 (309)
Q Consensus 4 ~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~~-g~-------------------~~~i~l 63 (309)
+..+.+++|++++++|++|+ +++.|++|..|+..++..+|+.++...++.. |- ..++..
T Consensus 105 ~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~~~~~~~~l~~~~~~l~~~~~ 183 (568)
T PRK11660 105 LLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHYLEKVGALFQALPTINW 183 (568)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHHhhccCCH
Confidence 44568899999999999995 7999999999999999999987654333221 10 011112
Q ss_pred HHHHHHHHHHHH-HHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhh-hhhhccccccc
Q 021687 64 PQILLVLIFALY-LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDA-CIKHAYTMKHC 141 (309)
Q Consensus 64 ~~~~lv~~v~l~-~~~~~~~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 141 (309)
+... +.++++. +..++++.++ .-..++.+++++++++.++. .+.+- + .+++ ..+...+ .+.
T Consensus 184 ~~~~-~~~~~l~lll~~~~~~~~---iP~~li~iiv~t~~~~~~~~---~~~~v-----~----~vg~~~~~~~~~-g~~ 246 (568)
T PRK11660 184 GDAL-IGIVTLGVLILWPRLKIR---LPGHLPALLAGTAVMGVLNL---LGGHV-----A----TIGSRFHYVLAD-GSQ 246 (568)
T ss_pred HHHH-HHHHHHHHHHHHHhhccc---CchHHHHHHHHHHHHHHHhc---cCCCc-----e----eecccccccccc-ccc
Confidence 2221 1112211 1122222222 22468899999999888742 21110 0 0000 0000000 000
Q ss_pred cccccccccCCcceeccCCCCCCCc-------eecHH----HHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccc
Q 021687 142 RTDVSNAWRTAAWVRIPYPLQWGIP-------IFHLR----TSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSR 210 (309)
Q Consensus 142 ~~d~~~~~~~~~w~~~P~p~~~g~P-------~f~~~----~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r 210 (309)
..... ...|-+.+| +..| .+++. .+...+.+.++..+|++-.....++..++ +.+.||
T Consensus 247 ~~~ip---~~~p~~~~p----~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~~----~~d~n~ 315 (568)
T PRK11660 247 GNGIP---PLLPQFVLP----WNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGT----KHSANS 315 (568)
T ss_pred ccCCC---CCCCCCCCC----ccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCcH
Confidence 00000 001112222 1111 13443 34455677888888988776677666552 234799
Q ss_pred cchhcchHHHHHhhhCCCCCCCcc-ccchhhhhhcccCCchHHHHHHHHHHHH--HhhhhHHHHhcccccCCCCCCccCc
Q 021687 211 GIGMEGFCSILAGLWGSGTGSSTL-TENVHTISITKVASRRAVQLGAVFMIVF--SFVGKSVPFWPLYHRHWLPPYCASC 287 (309)
Q Consensus 211 ~l~~dGlgsilagl~Gt~~~~t~~-sen~g~i~~t~~~sR~~~~~agv~lill--g~~pk~~al~~~IP~~~~p~~~~~~ 287 (309)
++.++|++|+++|++|+ .|.+.+ +++..... +|.++|.+..++++++++. .+.| ++..+ |
T Consensus 316 EL~a~G~aNi~~~~fgg-~p~~~s~srSa~n~~-aGarT~la~iv~a~~~ll~ll~l~~----ll~~i-----P------ 378 (568)
T PRK11660 316 ELVGQGLGNIVAPFFGG-ITATAAIARSAANVR-AGATSPISAVIHALLVLLALLVLAP----LLSYL-----P------ 378 (568)
T ss_pred HHHHHhHHHHHHHHhCc-ccccchHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHHHH----HHHhC-----c------
Confidence 99999999999999996 888777 55554444 5667888877666555433 3444 88888 5
Q ss_pred cchHHHHHHHHH
Q 021687 288 GPLLWQLVSQIC 299 (309)
Q Consensus 288 ~~v~~g~~~~~~ 299 (309)
.+++++++..+.
T Consensus 379 ~~vLa~ili~~~ 390 (568)
T PRK11660 379 LSAMAALLLMVA 390 (568)
T ss_pred HHHHHHHHHHHH
Confidence 566666655443
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.12 E-value=1.9e-10 Score=106.66 Aligned_cols=234 Identities=15% Similarity=0.199 Sum_probs=134.4
Q ss_pred hhhhhHHHHHhhcCccchHHHHHHHhhhhhhh------hccC---CCCC-------c----cc-hHHHHH--HHHHHHHH
Q 021687 19 GFTGLMSLFLRLINPVVVAPTVAAIGLAFFSY------GFPQ---AGSC-------V----EI-SIPQIL--LVLIFALY 75 (309)
Q Consensus 19 g~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~------~~~~---~g~~-------~----~i-~l~~~~--lv~~v~l~ 75 (309)
|+.| .+++.|++|..|+..++..+|+.++.- ++++ .... . +. .+.... +..++.+.
T Consensus 2 Gllr-lG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 80 (280)
T PF00916_consen 2 GLLR-LGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFLL 80 (280)
T ss_pred cccc-ccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHHh
Confidence 5667 499999999999999999999977643 3321 0000 0 00 111111 11111111
Q ss_pred -HHHHH-HHhchhhhhhH-HHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCC
Q 021687 76 -LRGIS-VFGHHLFRIYA-VPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTA 152 (309)
Q Consensus 76 -~~~~~-~~~~g~~~~~a-iLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 152 (309)
...+. ++.+++.+..+ .++.+++++.+++.... ...+.+ +..+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~p~~li~vv~~~~~~~~~~~-~~~~v~----------------------------~~~~i~~~l 131 (280)
T PF00916_consen 81 IIRLLPKRLPSRFWPPIPAPLIVVVLGTLLSWLFLL-DKYGVA----------------------------IVGEIPSGL 131 (280)
T ss_pred hhhhhhhhccccccccccccceeeehhhhhhhhhhh-cccccc----------------------------ccccccccC
Confidence 11111 12234444444 78888888888877621 000000 000001122
Q ss_pred cceeccCCCCCCCceecHHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCC
Q 021687 153 AWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSS 232 (309)
Q Consensus 153 ~w~~~P~p~~~g~P~f~~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t 232 (309)
|.+.+|. .++++..+ ...+...+.++++..+|++.+....++..+ ++.+.||++.+.|++|+++|++|+ .|.+
T Consensus 132 p~~~~p~-~~~~~~~~-~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~----~~~d~n~El~a~G~aNi~s~~~gg-~p~~ 204 (280)
T PF00916_consen 132 PPPSLPS-FDISWSLI-LDLLPTALAIAIVGFIESLLIAKSIAKKTG----YRIDPNQELIALGLANIVSGLFGG-MPGS 204 (280)
T ss_pred ccccCcc-cccccccc-cccchhHHHHHHHHHHHHHHhhhhhccccc----ccCCcHHHHHHhhhccccchhhcc-cccc
Confidence 3333442 11111111 234455678888999999988777766554 223579999999999999999996 7766
Q ss_pred ccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHHHh
Q 021687 233 TLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICSIL 302 (309)
Q Consensus 233 ~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~~~ 302 (309)
..-....+-..+|.++|.+..+++++++++-++ +..++..+ | -++++|++..+.--+
T Consensus 205 ~s~srs~~~~~~Ga~t~~s~~~~~~~~l~~l~~--~~~~l~~i-----P------~~~La~ili~~~~~l 261 (280)
T PF00916_consen 205 GSFSRSAVNYRAGARTRLSGLISALFVLLVLLF--LAPLLAYI-----P------KAVLAAILIVVGISL 261 (280)
T ss_pred cccccchHHHhcCcceeehhHHHHHHHHHHHHH--HHHHHHHH-----H------HHHHHHHHHHHHHhh
Confidence 654444444456778899887777766554332 23488888 6 678888877665433
No 17
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=98.40 E-value=2.1e-05 Score=82.00 Aligned_cols=230 Identities=14% Similarity=0.173 Sum_probs=135.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhh------hccCCC---CC-----------cc--
Q 021687 3 ELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSY------GFPQAG---SC-----------VE-- 60 (309)
Q Consensus 3 ~~~GavivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~------~~~~~g---~~-----------~~-- 60 (309)
.+.-..+++|++|.++|+.++ +++.+++|..++.++....++.+.-. |+++.. +. ..
T Consensus 167 va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~ 245 (665)
T KOG0236|consen 167 VATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLP 245 (665)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccc
Confidence 355678899999999999995 99999999988888888877755432 333111 00 00
Q ss_pred --chHHHHHHHHHHHHHHHH--HHHHhchhh--hhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhh
Q 021687 61 --ISIPQILLVLIFALYLRG--ISVFGHHLF--RIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKH 134 (309)
Q Consensus 61 --i~l~~~~lv~~v~l~~~~--~~~~~~g~~--~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 134 (309)
+....+.+..++.++... ..++.|.+. ....-++.+++++++++.+...+. +. +
T Consensus 246 ~~~~~~~~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~--~~------~------------ 305 (665)
T KOG0236|consen 246 KTLATLVLSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGR--YG------P------------ 305 (665)
T ss_pred ccchhhhhHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccc--cC------C------------
Confidence 001222222222222111 111222221 222378999999999998843111 00 0
Q ss_pred ccccccccccccccc-cCCcceeccCCCCCCCceec--HHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCccccccc
Q 021687 135 AYTMKHCRTDVSNAW-RTAAWVRIPYPLQWGIPIFH--LRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRG 211 (309)
Q Consensus 135 ~~~~~~~~~d~~~~~-~~~~w~~~P~p~~~g~P~f~--~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~ 211 (309)
. .. .-.+++.- ...|.++ ...+...+.+.+++..|++.--...++.-+ + .-+-||+
T Consensus 306 ----------~--~~~~i~~g~~~-----~~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~--y--~vd~nqE 364 (665)
T KOG0236|consen 306 ----------I--IVGEIPRGFPP-----PSLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHG--Y--KVDSNQE 364 (665)
T ss_pred ----------e--eeccCCCCCCC-----CCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--C--eeCCChH
Confidence 0 01 11223322 2333332 345666788899999998766556555544 2 2235899
Q ss_pred chhcchHHHHHhhhCCCCCCCccccchhhhhhcccCCchHHHHHHHHH-HHHHhhhhHHHHhcccccC
Q 021687 212 IGMEGFCSILAGLWGSGTGSSTLTENVHTISITKVASRRAVQLGAVFM-IVFSFVGKSVPFWPLYHRH 278 (309)
Q Consensus 212 l~~dGlgsilagl~Gt~~~~t~~sen~g~i~~t~~~sR~~~~~agv~l-illg~~pk~~al~~~IP~~ 278 (309)
+.|-|++|+++++|++ .|.|..-.+..+=..+|++++-...+.++.. +.+-+ ++.++..+|..
T Consensus 365 LiAlG~~Ni~sSff~~-~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~~---l~p~f~~iP~~ 428 (665)
T KOG0236|consen 365 LIALGISNILSSFFGC-YPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALLF---LGPLFYYIPKC 428 (665)
T ss_pred HHHHHHHHHhhhhhce-EcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHHH---HHHHhhhhhHH
Confidence 9999999999999997 7777766666666667777777755444333 33322 34478888543
No 18
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=96.40 E-value=0.19 Score=48.93 Aligned_cols=221 Identities=19% Similarity=0.247 Sum_probs=116.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHHHhhhhhhhhccC----CCCCccchHHHHHHHHHHHHHHHHHHHHhc
Q 021687 9 IVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQ----AGSCVEISIPQILLVLIFALYLRGISVFGH 84 (309)
Q Consensus 9 ivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~IGl~l~~~~~~~----~g~~~~i~l~~~~lv~~v~l~~~~~~~~~~ 84 (309)
+.-|++-++++.++--+|+.+.-...|.|..+...|..=.-..++. +.+...-....+.+...+.+|. .+..+.|
T Consensus 149 ilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl~~wa~~~~~~~i~fvvi~~tiv~Ya-~L~k~~K 227 (492)
T PF11840_consen 149 ILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKLFAWANGFDMGYIAFVVIIVTIVLYA-YLAKIEK 227 (492)
T ss_pred HHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHH-HHHHhcc
Confidence 3457777888888888888888888888877766665322111111 1111111122333333333342 2344556
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccCCcceeccCCCCCC
Q 021687 85 HLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWG 164 (309)
Q Consensus 85 g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~P~p~~~g 164 (309)
|| .++.++-+++-++++.++. .+++.. .|..| ++ ...=|-.--+=.+.|
T Consensus 228 rW---LaIPl~~~~a~~~a~~lGa--~f~f~t-~pglp---------------------~l----nP~YWWge~tGw~Lg 276 (492)
T PF11840_consen 228 RW---LAIPLCSILAGVLAFALGA--PFEFTT-EPGLP---------------------NL----NPMYWWGEETGWQLG 276 (492)
T ss_pred ch---hhhhHHHHHHHHHHHHcCC--Cceeec-CCCCC---------------------CC----CCcccccCCcccccC
Confidence 55 4678888888888888843 233321 11112 11 111111111122346
Q ss_pred CceecHHHHHHHHHHHHHH----HHHhhhhHHHHHhhhCCC--CCCcccccccchhcchHHHHHhhhCCCCCCCccccch
Q 021687 165 IPIFHLRTSLIMIIVSLVA----SVDSVGTYHTASLLVNSK--PPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENV 238 (309)
Q Consensus 165 ~P~f~~~~il~~~~~~lv~----~~es~G~~~a~~~~~~~~--~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~ 238 (309)
+|.++ -++..+++++.+ +-|..|+ ...++..-.| ++..-+++.....-.+=+++++.+|. ++.++|=-.
T Consensus 277 lP~~~--hfiav~PFAiLAVaMWSpDflgh-rvFqelnypk~~~kvlMnvDDTm~~~siRQ~vGs~lGG--gN~~SsWgT 351 (492)
T PF11840_consen 277 LPTLE--HFIAVLPFAILAVAMWSPDFLGH-RVFQELNYPKETKKVLMNVDDTMTMCSIRQIVGSILGG--GNIASSWGT 351 (492)
T ss_pred CCcHH--HHHHhccHHHHHHHHhCchHHHH-HHHHHhcCchhhcceeecccchhHHHHHHHHHhhcccC--Ccccccchh
Confidence 67543 333344443333 2477777 3344443322 12223478888899999999999996 344433222
Q ss_pred h--hhhhcccCCchHHHHHHHHHHHHHhhh
Q 021687 239 H--TISITKVASRRAVQLGAVFMIVFSFVG 266 (309)
Q Consensus 239 g--~i~~t~~~sR~~~~~agv~lillg~~p 266 (309)
= -.++.|+-=+--.+..|+++++.+..+
T Consensus 352 ymIPaaIaKRPIpggAiLtg~~Ci~~av~G 381 (492)
T PF11840_consen 352 YMIPAAIAKRPIPGGAILTGLLCIVAAVWG 381 (492)
T ss_pred hhhhHHHhcCCCCchHHHHHHHHHHHHHhc
Confidence 2 223335444444678889998888865
No 19
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=95.90 E-value=0.49 Score=51.14 Aligned_cols=176 Identities=15% Similarity=0.147 Sum_probs=89.1
Q ss_pred HhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccc--cCCcceeccC
Q 021687 82 FGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAW--RTAAWVRIPY 159 (309)
Q Consensus 82 ~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~w~~~P~ 159 (309)
+.|+++.-|++.+++++-+.+.+.+. .++.+.. ..|+ .|. +- ..-.|+--|.
T Consensus 590 ~vR~~isDfgv~iaI~~~t~v~~~~~---~v~~~kl--~Vp~--------------------~f~-pt~p~~R~W~i~p~ 643 (900)
T TIGR00834 590 KARRLIGDFGVPISILIMVLVDIFIG---DTYTQKL--SVPS--------------------GLK-VTNPSARGWFIPPL 643 (900)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhc---cCccccc--CCCC--------------------CcC-CCCCCCCCeEEccc
Confidence 34667777899999999999888763 2211100 0110 111 11 1146773331
Q ss_pred CCCCCCceec-HHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCc-----
Q 021687 160 PLQWGIPIFH-LRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSST----- 233 (309)
Q Consensus 160 p~~~g~P~f~-~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~----- 233 (309)
-.....|.+. +.++++.+.+++.-.+|+-=+..-+++-..+-+ -+...+==+..-|+.+.++|++|- +..+.
T Consensus 644 ~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLk-KgsgyH~Dllllg~~~~v~sllGL-Pw~~aatv~S 721 (900)
T TIGR00834 644 GENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKERKLK-KGSGFHLDLLLVVGMGGVAALFGL-PWLSAATVRS 721 (900)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCC-CCcccchHHHHHHHHHHHHHhcCC-CcccccCCcC
Confidence 1011113332 345556666677777787655444433211101 111234446778899999999995 53222
Q ss_pred ---------cccchhhh---hhcccCC-chHHHHHHHHH-HHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHH
Q 021687 234 ---------LTENVHTI---SITKVAS-RRAVQLGAVFM-IVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQIC 299 (309)
Q Consensus 234 ---------~sen~g~i---~~t~~~s-R~~~~~agv~l-illg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~ 299 (309)
++++..-- ...+|.. |.+....+++. +.+-+.| ++..| | .+|+.|+++.+-
T Consensus 722 ~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLiglsv~~~P----vL~~I-----P------~aVL~GvFlYMG 786 (900)
T TIGR00834 722 VTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGLSILMEP----ILKRI-----P------LAVLFGIFLYMG 786 (900)
T ss_pred hhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHHHHHHHH----HHhhc-----c------HHHHHHHHHHHH
Confidence 22221100 0113333 33334444322 2222333 77777 8 899999998864
Q ss_pred H
Q 021687 300 S 300 (309)
Q Consensus 300 ~ 300 (309)
.
T Consensus 787 v 787 (900)
T TIGR00834 787 V 787 (900)
T ss_pred H
Confidence 3
No 20
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=95.07 E-value=3.4 Score=44.29 Aligned_cols=175 Identities=15% Similarity=0.227 Sum_probs=89.9
Q ss_pred HhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccccccC-CcceeccCC
Q 021687 82 FGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRT-AAWVRIPYP 160 (309)
Q Consensus 82 ~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~w~~~P~p 160 (309)
+.|.+++-|++.+++++-..+.+.. +....+.. ..| ..+...... ..|+-.|.
T Consensus 569 ~~R~~isDfgvpisIl~~s~i~~~~---~~~~~~kl--~vp--------------------~~~~~t~~~~rgw~v~~~- 622 (876)
T KOG1172|consen 569 KVRSLISDFGVPLSILVFSLIDYFG---GSVETPKL--PVP--------------------SVFPPTWPFDRGWFVPPF- 622 (876)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHhhc---cccCCCcc--ccC--------------------cCCCCCCcccCCeeeCCC-
Confidence 4566777789999999998888887 32111100 000 011100011 36764441
Q ss_pred CCCCCceec-HHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCC-CCccccch
Q 021687 161 LQWGIPIFH-LRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTG-SSTLTENV 238 (309)
Q Consensus 161 ~~~g~P~f~-~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~-~t~~sen~ 238 (309)
...|-+. ..++++.+.+++.-.+|+-=+-.-++|...+ -+.+...+-=+..-|+-+.++|++|- +. +.+..++.
T Consensus 623 --~~~P~~~~~~A~ipalll~iLiFmDqqIts~iv~rke~k-LKKgsgyH~DLlllgil~~icsllGL-Pw~~~a~p~S~ 698 (876)
T KOG1172|consen 623 --GKNPWWYVFAALIPALLLTILIFMDQQITAVIVNRKENK-LKKGSGYHLDLLLLGILTLICSLLGL-PWSNAATVQSP 698 (876)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhcchHHHHHhhccccc-CCCCcchhHHHHHHHHHHHHHHhcCC-CccccccccCH
Confidence 1123222 2445555566666667766553333332211 01222245557888999999999995 44 33344433
Q ss_pred hhhhh----------------cccCCchHH-HHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHH
Q 021687 239 HTISI----------------TKVASRRAV-QLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICS 300 (309)
Q Consensus 239 g~i~~----------------t~~~sR~~~-~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~ 300 (309)
.=+.. -++...|+. ...+++. |++-....++..| | .+|++|+++.+..
T Consensus 699 ~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llv---gls~~~~pvL~~I-----P------~~VL~GvFlYMgv 763 (876)
T KOG1172|consen 699 MHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLV---GLSVLLLPVLKLI-----P------MPVLYGVFLYMGV 763 (876)
T ss_pred HHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHH---HHHHHHHHHHhhc-----c------HHHHHHHHHHHhh
Confidence 21111 123333332 3333332 2232234467777 8 8999999988754
No 21
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=60.09 E-value=35 Score=33.77 Aligned_cols=88 Identities=17% Similarity=0.148 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHhhh-hhHHHHHhhcCccchHHHHHHHhhhhhhh---hccC-CCCCccchHHHHHHHHHHHHHHHHH
Q 021687 5 QGAIIVGSIFQSILGFT-GLMSLFLRLINPVVVAPTVAAIGLAFFSY---GFPQ-AGSCVEISIPQILLVLIFALYLRGI 79 (309)
Q Consensus 5 ~GavivaGl~~iilg~t-g~~~~l~~~~Pp~V~g~~l~~IGl~l~~~---~~~~-~g~~~~i~l~~~~lv~~v~l~~~~~ 79 (309)
.++-+.+|++++++|++ +....+...+|+..+. ++-|+.|... .+.+ ..+..+-.-+.+++++.. .++
T Consensus 301 ~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~---~laGlAll~~~~~~l~~a~~~~~~r~~a~~tflvta----Sg~ 373 (395)
T TIGR00843 301 WIAAAAAGIFYLLAGLFAGAITALFAALPKELIA---ALAGLALLGAIAGNIKIALHEDQERDAALIAFLATA----SGL 373 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hcC
Confidence 46788999999999987 7778889999998877 3345544432 1111 122222222333333221 233
Q ss_pred HHHhchhhhhhHHHHHHHHHHHHHH
Q 021687 80 SVFGHHLFRIYAVPLSVMIIWAYAF 104 (309)
Q Consensus 80 ~~~~~g~~~~~aiLigivvg~~~a~ 104 (309)
+ ++...+-+.|+++|.+..+
T Consensus 374 ~-----~~gigaafWgl~~G~~~~~ 393 (395)
T TIGR00843 374 H-----FLGIGSAFWGLCAGGLAYF 393 (395)
T ss_pred C-----cccccHHHHHHHHHHHHHH
Confidence 3 3445589999999977654
No 22
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=50.68 E-value=1.3e+02 Score=30.92 Aligned_cols=105 Identities=7% Similarity=0.107 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCccccchhhhhhc-------c
Q 021687 173 SLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHTISIT-------K 245 (309)
Q Consensus 173 il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~g~i~~t-------~ 245 (309)
++..+..+++.+-++++- +..+|-+ -.-++.+--+..++.++||+ ++-...........+. +
T Consensus 18 i~aGltv~~~~iP~~~ay----A~laglp------p~~GLysa~~~~iv~alfGs-s~~~i~Gp~a~~sl~~~~~v~~~~ 86 (563)
T TIGR00815 18 LMAGLTVGILLIPQAMAY----AILAGLS------PIYGLYTSFVPPFIYALFGT-SRDIAIGPVAVMSLLLGSVIARVG 86 (563)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHcCCC------chhhhHHHHHHHHHhheecC-CCcccCCHHHHHHHHHHHHHHHhc
Confidence 345566677777777653 4455522 13568899999999999997 7766665554433332 1
Q ss_pred cCC----c------hHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHHH
Q 021687 246 VAS----R------RAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQICS 300 (309)
Q Consensus 246 ~~s----R------~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~~ 300 (309)
... + .....+|++++++|++ |+..+...+ | .||+.|++.-+.-
T Consensus 87 ~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~l-rlG~l~~~i-----s------~~Vi~Gf~~g~a~ 139 (563)
T TIGR00815 87 LQYLFDCDAIRLAFTLTLLAGIFQVILGLL-RLGFLIEFL-----S------HAVISGFMTGAAI 139 (563)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHh-----h------HHHHHHHHHHHHH
Confidence 111 1 3456889999999977 688888889 6 6777777655443
No 23
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=49.14 E-value=13 Score=36.41 Aligned_cols=51 Identities=8% Similarity=0.089 Sum_probs=40.4
Q ss_pred CCccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHH
Q 021687 231 SSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQIC 299 (309)
Q Consensus 231 ~t~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~ 299 (309)
-.+|.|-+|. +.++|++.++.|+.+.+..++..||.++. +..+.|+++-.|
T Consensus 84 ~~~~~eavGA-----------fl~~~~Li~l~G~tg~~~rl~~~IP~~ia-------~AMLAGvLl~f~ 134 (378)
T PF03594_consen 84 GYSFAEAVGA-----------FLVAGALILLLGVTGLFGRLMRRIPPPIA-------SAMLAGVLLPFG 134 (378)
T ss_pred CCCHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHCCHHHH-------HHHHHHHHHHHH
Confidence 3467777775 78999999999999999999999988766 366777766544
No 24
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=48.85 E-value=5.7 Score=40.52 Aligned_cols=179 Identities=15% Similarity=0.222 Sum_probs=0.0
Q ss_pred HhchhhhhhHHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhhccccccccccccc-cccCCcceeccCC
Q 021687 82 FGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSN-AWRTAAWVRIPYP 160 (309)
Q Consensus 82 ~~~g~~~~~aiLigivvg~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~w~~~P~p 160 (309)
+.|++++-+++.|++++-+.+..... .+.+.. +.|+ ++.. .-....|+--|.
T Consensus 275 ~vR~~isDf~v~iaI~~~~~~~~~~~----~~~~kL--~vp~--------------------~f~pt~~~~r~W~v~p~- 327 (510)
T PF00955_consen 275 WVREIISDFGVPIAILIMTLVDYLFG----VDTPKL--NVPS--------------------SFKPTSPGKRGWFVNPF- 327 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhHHhhHHHHHHHHHHHHHHHhc----cccccc--CCCC--------------------CCCCCCCCCCCeecCcc-
Confidence 45667777889999999888877662 111100 0110 1110 001135664331
Q ss_pred CCCCCceec-HHHHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCc-cccch
Q 021687 161 LQWGIPIFH-LRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSST-LTENV 238 (309)
Q Consensus 161 ~~~g~P~f~-~~~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~-~sen~ 238 (309)
...|.+. ..++++.+.+++.-.+|+-=+-.-+++...+-+ .+...+=-+..-|+-+.+.|++|- +.... ..++.
T Consensus 328 --~~~p~w~~~aA~~palll~iL~F~DqnIts~ivn~~e~kLk-Kg~gyH~DL~llgi~~~v~sllGL-Pw~~aa~~~S~ 403 (510)
T PF00955_consen 328 --GSLPWWAIFAAIIPALLLTILFFMDQNITSLIVNRPENKLK-KGSGYHLDLFLLGIITLVCSLLGL-PWMNAATPQSP 403 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHHHHhHhHHHhCChhhccC-CCCcccHHHHHHHHHHHHHHHcCC-CCcccCccCCH
Confidence 1234333 234444455555556675544222222111101 111234456788999999999995 44332 21111
Q ss_pred h-hhh---------------hcccCCchH-HHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHH--
Q 021687 239 H-TIS---------------ITKVASRRA-VQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQIC-- 299 (309)
Q Consensus 239 g-~i~---------------~t~~~sR~~-~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~-- 299 (309)
. .-+ ..+++..|+ .....+ +.|++.-+..++..| | .||+.|+++.+-
T Consensus 404 ~Hv~sL~~~~~~~~pGe~~~i~~V~EqRvT~l~~~~---Ligls~~l~pvL~~I-----P------~~VL~GvFlymG~~ 469 (510)
T PF00955_consen 404 MHVRSLAVESETSAPGEKPKIVGVREQRVTGLLVHL---LIGLSLFLLPVLKLI-----P------MPVLYGVFLYMGVT 469 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhCcccEEeccccCCCCCeeCeEEEecccHHHHHH---HHHHHHHHHHHHHHh-----h------HHHHHHHHHhheee
Confidence 0 000 112232233 233332 234444344456666 7 899999998765
Q ss_pred HHhhhh
Q 021687 300 SILNQQ 305 (309)
Q Consensus 300 ~~~~~~ 305 (309)
++-|.|
T Consensus 470 sL~gnq 475 (510)
T PF00955_consen 470 SLSGNQ 475 (510)
T ss_dssp ------
T ss_pred eecCcc
Confidence 444444
No 25
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=38.32 E-value=1.3e+02 Score=31.06 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCccccchhhhhhc--ccC--
Q 021687 172 TSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHTISIT--KVA-- 247 (309)
Q Consensus 172 ~il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~g~i~~t--~~~-- 247 (309)
=++..+..+++..-|+++- ++.+|-+ -..++.+.=++.++.++||+ ++.-..++..+...+. -+.
T Consensus 24 Dl~AGltva~valP~ama~----a~~aGv~------p~~GLyas~i~~~v~alfGg-s~~~i~GPt~a~~~v~a~~i~~~ 92 (554)
T COG0659 24 DLLAGLTVAAVALPLAMAF----AIAAGVP------PEAGLYASIVAGIIYALFGG-SRGLISGPTGAFAVVLAAVIASL 92 (554)
T ss_pred HHHHHHHHHHHHhHHHHHH----HHHcCCC------HHHHHHHHHHHHHHHHHHcC-CccceeccchhhHHHHHHHHHHH
Confidence 3455677777777777764 3455521 25788899999999999996 7766555443332222 111
Q ss_pred -Cc------hHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHH
Q 021687 248 -SR------RAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQIC 299 (309)
Q Consensus 248 -sR------~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~ 299 (309)
.+ .....+|++.+++|++ |++.++..||+ ||+-|.+.-+.
T Consensus 93 ~~~g~~~~~~~tllaGv~~i~~G~l-RLG~li~fip~-----------pVl~Gf~~Gia 139 (554)
T COG0659 93 VETGLALAFLATLLAGVFQILLGLL-RLGRLIRFIPR-----------PVLIGFTAGIA 139 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhccH-----------HHHHHHHHHHH
Confidence 11 1235788888888877 79999999954 67777665443
No 26
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=33.31 E-value=4.3e+02 Score=25.75 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCccchHHHH
Q 021687 8 IIVGSIFQSILGFTGLMSLFLRLINPVVVAPTV 40 (309)
Q Consensus 8 vivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l 40 (309)
.+++|++.+++++.+....+...+|..+.+...
T Consensus 298 ~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~ 330 (406)
T TIGR03173 298 VAAAGVILVLLGLFPKLAALVASIPQPVLGGAG 330 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 467899999999877789999999998888743
No 27
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=32.45 E-value=51 Score=32.28 Aligned_cols=47 Identities=11% Similarity=0.211 Sum_probs=38.3
Q ss_pred ccccchhhhhhcccCCchHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHH
Q 021687 233 TLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQ 297 (309)
Q Consensus 233 ~~sen~g~i~~t~~~sR~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~ 297 (309)
++.|-+|. +.++|..++++|+...+..+++.||..+. +..+.|+++-
T Consensus 101 s~~eaVGA-----------fiVt~~li~l~G~~~~l~rl~~~IP~sla-------~AmlAGILL~ 147 (402)
T COG3135 101 SFAEAVGA-----------FIVTGALIILCGLTGPLTRLMRIIPPSLA-------AAMLAGILLR 147 (402)
T ss_pred CHHHHHHH-----------HHHHHHHHHHHhhhHHHHHHHHhCChHHH-------HHHHHHHHHH
Confidence 67776665 78999999999999999999999987665 3667777654
No 28
>PF04284 DUF441: Protein of unknown function (DUF441); InterPro: IPR007382 This entry contains proteins of unknown function. They are predicted to be transmembrane proteins with 4 TM domains.
Probab=31.06 E-value=2.4e+02 Score=23.85 Aligned_cols=99 Identities=10% Similarity=0.125 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhcCc--cchHHHHHHHhhhhhhhhccCCCCC--c-cchHHHHHHHHHHHHHHHHHHHH
Q 021687 8 IIVGSIFQSILGFTGLMSLFLRLINP--VVVAPTVAAIGLAFFSYGFPQAGSC--V-EISIPQILLVLIFALYLRGISVF 82 (309)
Q Consensus 8 vivaGl~~iilg~tg~~~~l~~~~Pp--~V~g~~l~~IGl~l~~~~~~~~g~~--~-~i~l~~~~lv~~v~l~~~~~~~~ 82 (309)
+.++..+.+++-.+++-+++..++-. .=.|.++..+++ +.|.+.+..+.. . ....+.-.+.+........++..
T Consensus 18 i~iAa~vLL~lk~~~l~~~~~p~le~~Gl~~GiiiLtiai-LvPiAtGki~~~~l~~~f~s~~g~~Ai~~Gilva~l~g~ 96 (140)
T PF04284_consen 18 IAIAACVLLILKLLPLDQYIFPFLEKKGLNWGIIILTIAI-LVPIATGKIGFKDLLNSFKSWKGIIAILAGILVAWLGGR 96 (140)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHhChhHhHHHHHHHH-HccccCCCcCHHHHHHHHhCHHHHHHHHHHHHHHHHhcc
Confidence 45566677777665543332222222 345666666665 567765544311 0 01001111112222222223323
Q ss_pred hchhhhhhH-HHHHHHHHHHHHHHHH
Q 021687 83 GHHLFRIYA-VPLSVMIIWAYAFFLT 107 (309)
Q Consensus 83 ~~g~~~~~a-iLigivvg~~~a~~~~ 107 (309)
+-..++.=| +..|+++|++++..+-
T Consensus 97 Gv~Ll~~~P~v~~gLviGTIiGV~ff 122 (140)
T PF04284_consen 97 GVNLLKVQPQVIVGLVIGTIIGVAFF 122 (140)
T ss_pred ChHHHccCChhhHHHHHHHHHHHHHc
Confidence 333444445 8899999999988873
No 29
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=26.68 E-value=3.7e+02 Score=26.91 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhcCccchHHHHHH
Q 021687 7 AIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAA 42 (309)
Q Consensus 7 avivaGl~~iilg~tg~~~~l~~~~Pp~V~g~~l~~ 42 (309)
.+..+|++.+++|+.+-...+...+|..|.|...+.
T Consensus 319 v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~ 354 (433)
T PRK11412 319 SFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLV 354 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 356789999999998888899999998888866543
No 30
>PRK11660 putative transporter; Provisional
Probab=22.83 E-value=5.8e+02 Score=26.24 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhhCCCCCCcccccccchhcchHHHHHhhhCCCCCCCccccchhhhhhc----ccCC
Q 021687 173 SLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHTISIT----KVAS 248 (309)
Q Consensus 173 il~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~i~r~l~~dGlgsilagl~Gt~~~~t~~sen~g~i~~t----~~~s 248 (309)
++..+..+++.+-++++- +..+|.++ .-|+.+--++.++.+++|+ ++-...........+. +...
T Consensus 33 ~iAGltv~~~~iPq~may----A~lag~pp------~~GLysa~~~~~vyal~Gs-s~~~~~Gp~a~~~~~~~~~~~~~~ 101 (568)
T PRK11660 33 LIAGITVGIIAIPLAMAL----AIASGVPP------QYGLYTAAVAGIVIALTGG-SRFSVSGPTAAFVVILYPVSQQFG 101 (568)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHcCCCh------HHHHHHHHHHHHHHHHhcC-CCCcccChhHHHHHHHHHHHHHhh
Confidence 355677777777777753 34566221 2378899999999999997 7766655444332221 1111
Q ss_pred -c---hHHHHHHHHHHHHHhhhhHHHHhcccccCCCCCCccCccchHHHHHHHHH
Q 021687 249 -R---RAVQLGAVFMIVFSFVGKSVPFWPLYHRHWLPPYCASCGPLLWQLVSQIC 299 (309)
Q Consensus 249 -R---~~~~~agv~lillg~~pk~~al~~~IP~~~~p~~~~~~~~v~~g~~~~~~ 299 (309)
. .....+|++.+++|++- +..+...+ | .||+.|+..-+.
T Consensus 102 ~~~~~~~~~l~Gii~~l~gllr-lG~l~~fi-----p------~pVi~Gf~~g~a 144 (568)
T PRK11660 102 LAGLLVATLMSGIILILMGLAR-LGRLIEYI-----P------LSVTLGFTSGIG 144 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hhHHHhcC-----c------HHHHHHHHHHHH
Confidence 1 12468899999999874 77888889 5 567777655443
No 31
>COG4064 MtrG Tetrahydromethanopterin S-methyltransferase, subunit G [Coenzyme metabolism]
Probab=20.15 E-value=1.5e+02 Score=22.12 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=23.3
Q ss_pred HHHhchhhhhhHHHHHHHHHHHHHHHHH
Q 021687 80 SVFGHHLFRIYAVPLSVMIIWAYAFFLT 107 (309)
Q Consensus 80 ~~~~~g~~~~~aiLigivvg~~~a~~~~ 107 (309)
.+.+|++=|-..+|.|+++|.+++....
T Consensus 40 Qr~GkkiGRDIGILYGlVIGlil~~i~~ 67 (75)
T COG4064 40 QRIGKKIGRDIGILYGLVIGLILCMIYI 67 (75)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 4567888788899999999999988763
Done!